Your job contains 1 sequence.
>025916
MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRLRPD
CLNPDSFCKSKPRSPVITMYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK
PPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKN
VKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDL
KKAQLI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025916
(246 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130449 - symbol:CLPR4 "CLP protease R subunit... 646 1.1e-76 2
UNIPROTKB|E2QUV8 - symbol:CLPP "ATP-dependent Clp proteas... 262 1.0e-25 2
UNIPROTKB|P0A6G7 - symbol:clpP species:83333 "Escherichia... 275 5.3e-24 1
TIGR_CMR|CHY_0325 - symbol:CHY_0325 "ATP-dependent Clp pr... 270 1.8e-23 1
UNIPROTKB|Q2KHU4 - symbol:CLPP "Putative ATP-dependent Cl... 266 4.8e-23 1
FB|FBgn0032229 - symbol:CG5045 species:7227 "Drosophila m... 263 1.0e-22 1
UNIPROTKB|Q16740 - symbol:CLPP "Putative ATP-dependent Cl... 263 1.0e-22 1
MGI|MGI:1858213 - symbol:Clpp "ClpP caseinolytic peptidas... 263 1.0e-22 1
RGD|1588583 - symbol:Clpp "ClpP caseinolytic peptidase, A... 263 1.0e-22 1
ZFIN|ZDB-GENE-030131-7860 - symbol:clpp "ClpP caseinolyti... 260 2.1e-22 1
TIGR_CMR|CJE_0185 - symbol:CJE_0185 "ATP-dependent Clp pr... 259 2.6e-22 1
TIGR_CMR|CBU_0738 - symbol:CBU_0738 "ATP-dependent Clp pr... 256 5.5e-22 1
UNIPROTKB|F1SBT2 - symbol:CLPP "ATP-dependent Clp proteas... 255 7.0e-22 1
TIGR_CMR|APH_0970 - symbol:APH_0970 "ATP-dependent Clp pr... 253 1.1e-21 1
TIGR_CMR|NSE_0752 - symbol:NSE_0752 "ATP-dependent Clp pr... 253 1.1e-21 1
TIGR_CMR|CPS_3785 - symbol:CPS_3785 "ATP-dependent Clp pr... 252 1.5e-21 1
TIGR_CMR|ECH_0901 - symbol:ECH_0901 "ATP-dependent Clp pr... 250 2.4e-21 1
UNIPROTKB|P63786 - symbol:clpP "ATP-dependent Clp proteas... 245 8.0e-21 1
TIGR_CMR|VC_1922 - symbol:VC_1922 "ATP-dependent Clp prot... 245 8.0e-21 1
TIGR_CMR|GSU_1792 - symbol:GSU_1792 "ATP-dependent Clp pr... 243 1.3e-20 1
TIGR_CMR|SO_1794 - symbol:SO_1794 "ATP-dependent Clp prot... 241 2.1e-20 1
TAIR|locus:2031070 - symbol:CLPR1 "CLP protease proteolyt... 240 5.0e-20 1
TIGR_CMR|BA_2788 - symbol:BA_2788 "ATP-dependent Clp prot... 236 7.2e-20 1
UNIPROTKB|G4MLM6 - symbol:MGG_06757 "ATP-dependent Clp pr... 234 1.2e-19 1
TAIR|locus:2178282 - symbol:NCLPP7 "nuclear-encoded CLP p... 234 1.2e-19 1
TAIR|locus:2163538 - symbol:CLPP4 "CLP protease P4" speci... 233 1.5e-19 1
TIGR_CMR|BA_5380 - symbol:BA_5380 "ATP-dependent Clp prot... 229 4.0e-19 1
TIGR_CMR|SPO_1003 - symbol:SPO_1003 "ATP-dependent Clp pr... 227 6.5e-19 1
TAIR|locus:2196120 - symbol:CLPP5 "nuclear encoded CLP pr... 212 2.5e-17 1
TIGR_CMR|DET_0710 - symbol:DET_0710 "ATP-dependent Clp pr... 209 5.3e-17 1
TAIR|locus:2033344 - symbol:CLPP3 "CLP protease proteolyt... 209 5.3e-17 1
GENEDB_PFALCIPARUM|PF14_0348 - symbol:PF14_0348 "ATP-depe... 206 1.1e-16 1
UNIPROTKB|Q8IL98 - symbol:PF14_0348 "ATP-dependent Clp pr... 206 1.1e-16 1
TAIR|locus:2034625 - symbol:CLP2 "CLP protease proteolyti... 205 1.4e-16 1
WB|WBGene00014172 - symbol:clpp-1 species:6239 "Caenorhab... 205 1.4e-16 1
UNIPROTKB|P63783 - symbol:clpP2 "ATP-dependent Clp protea... 193 2.6e-15 1
UNIPROTKB|P0A526 - symbol:clpP1 "ATP-dependent Clp protea... 190 5.4e-15 1
GENEDB_PFALCIPARUM|PFC0310c - symbol:PFC0310c "ATP-depend... 172 1.8e-12 1
UNIPROTKB|O97252 - symbol:PFC0310c "ATP-dependent CLP pro... 172 1.8e-12 1
UNIPROTKB|P0C312 - symbol:clpP "ATP-dependent Clp proteas... 141 2.1e-08 1
UNIPROTKB|P0C313 - symbol:clpP "ATP-dependent Clp proteas... 141 2.1e-08 1
UNIPROTKB|P0C314 - symbol:clpP "ATP-dependent Clp proteas... 141 2.1e-08 1
UNIPROTKB|Q6ENE9 - symbol:clpP "ATP-dependent Clp proteas... 141 2.1e-08 1
UNIPROTKB|Q6E6T0 - symbol:Q6E6T0 "ATP-dependent Clp prote... 136 8.4e-08 1
>TAIR|locus:2130449 [details] [associations]
symbol:CLPR4 "CLP protease R subunit 4" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0000302 "response to reactive oxygen species" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004252 GO:GO:0000302
GO:GO:0010468 EMBL:Z97342 EMBL:AL161545 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
EMBL:AK117499 EMBL:AY081275 EMBL:BT000050 EMBL:AY087492
IPI:IPI00525806 PIR:G71438 RefSeq:NP_567521.1 UniGene:At.19677
PDB:1R99 PDBsum:1R99 ProteinModelPortal:Q8LB10 SMR:Q8LB10
IntAct:Q8LB10 STRING:Q8LB10 PaxDb:Q8LB10 PRIDE:Q8LB10 ProMEX:Q8LB10
EnsemblPlants:AT4G17040.1 GeneID:827412 KEGG:ath:AT4G17040
GeneFarm:809 TAIR:At4g17040 InParanoid:Q8LB10 OMA:YFSPSEA
PhylomeDB:Q8LB10 ProtClustDB:CLSN2689477 Genevestigator:Q8LB10
Uniprot:Q8LB10
Length = 305
Score = 646 (232.5 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 123/167 (73%), Positives = 137/167 (82%)
Query: 80 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXX 139
YED EKPIYLYINSTGTTK GEKLGY+TEAFAIYDVMGYVKPPIFTLCVGN
Sbjct: 139 YEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 198
Query: 140 XXXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 199
PSSTIMIKQPI R +GQATDVEIARKE+K++K E+VKLY+KH GK+PEQ
Sbjct: 199 TAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQ 258
Query: 200 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 246
IEAD++RPKYFSP+EAVEYGIIDKV+Y E+ +D GVVSDLKKAQLI
Sbjct: 259 IEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDLKKAQLI 305
Score = 145 (56.1 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 38/89 (42%), Positives = 51/89 (57%)
Query: 1 MEVATASAPIFG-LRTRMLATPP------RTSPR---TVNCNRNLSTSFISPFANGSVSS 50
MEVA A+A F LR R A P R+ PR + + +LS F+SP+ GS+SS
Sbjct: 1 MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISS 60
Query: 51 DFSGLRLRPDCLNPDSFCKSKPRSPVITM 79
D G +LR + LNP +F SKP+ V+TM
Sbjct: 61 DLCGAKLRAESLNPLNFSSSKPKRGVVTM 89
>UNIPROTKB|E2QUV8 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9615 "Canis lupus familiaris" [GO:0006508
"proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562
PANTHER:PTHR10381 GeneTree:ENSGT00390000005830 EMBL:AAEX03012495
Ensembl:ENSCAFT00000029683 OMA:NEESAME NextBio:20897274
Uniprot:E2QUV8
Length = 301
Score = 262 (97.3 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 61/153 (39%), Positives = 81/153 (52%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E +KPI++YINS G G T AIYD M Y+ PI T CVG
Sbjct: 133 ESNKKPIHMYINSPG--------GMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLA 184
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP G GQATD+ I +E+ +K +L +YAKH ++ + I
Sbjct: 185 AGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLQVI 244
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
E+ + R +Y SP EA E+GI+DKVL P+D
Sbjct: 245 ESAMERDRYMSPMEAQEFGILDKVLV--HPPQD 275
Score = 44 (20.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 3 VATASAPIFGLRTRMLAT-PPRTSPRT 28
VA +P G R+ A PPR +PRT
Sbjct: 12 VAVGRSPALG--PRLAARFPPRRTPRT 36
>UNIPROTKB|P0A6G7 [details] [associations]
symbol:clpP species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009266
"response to temperature stimulus" evidence=EXP] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005524 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0004252
GO:GO:0008236 GO:GO:0009408 EMBL:U82664 GO:GO:0006515
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:J05534 PIR:B36575 RefSeq:NP_414971.1
RefSeq:YP_488729.1 PDB:1TYF PDB:1YG6 PDB:1YG8 PDB:2FZS PDB:3HLN
PDB:3MT6 PDBsum:1TYF PDBsum:1YG6 PDBsum:1YG8 PDBsum:2FZS
PDBsum:3HLN PDBsum:3MT6 ProteinModelPortal:P0A6G7 SMR:P0A6G7
DIP:DIP-31838N IntAct:P0A6G7 SWISS-2DPAGE:P0A6G7 PaxDb:P0A6G7
PRIDE:P0A6G7 EnsemblBacteria:EBESCT00000004586
EnsemblBacteria:EBESCT00000016552 EnsemblBacteria:EBESCT00000232597
GeneID:12931742 GeneID:945082 KEGG:ecj:Y75_p0425 KEGG:eco:b0437
PATRIC:32116027 EchoBASE:EB0156 EcoGene:EG10158
BioCyc:EcoCyc:EG10158-MONOMER BioCyc:ECOL316407:JW0427-MONOMER
BioCyc:MetaCyc:EG10158-MONOMER EvolutionaryTrace:P0A6G7
Genevestigator:P0A6G7 Uniprot:P0A6G7
Length = 207
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 58/145 (40%), Positives = 81/145 (55%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQI
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
E D R ++ S EAVEYG++D +L
Sbjct: 179 ERDTERDRFLSAPEAVEYGLVDSIL 203
>TIGR_CMR|CHY_0325 [details] [associations]
symbol:CHY_0325 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:YP_359188.1
ProteinModelPortal:Q3AF96 SMR:Q3AF96 STRING:Q3AF96 GeneID:3726391
KEGG:chy:CHY_0325 PATRIC:21273821
BioCyc:CHYD246194:GJCN-326-MONOMER Uniprot:Q3AF96
Length = 195
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 59/149 (39%), Positives = 81/149 (54%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED EK I+LYINS G G T AIYD M Y+KP + T+C+G
Sbjct: 55 EDPEKDIHLYINSPG--------GVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLA 106
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P + IMI QP+G ++GQATD++I +E+ ++ L +L KH G+ E+I
Sbjct: 107 AGAKGKRFSLPYARIMIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKI 166
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEK 229
E D R + S +EA EYGIID+V+ K
Sbjct: 167 ERDTERDFFMSAAEAKEYGIIDEVITVRK 195
>UNIPROTKB|Q2KHU4 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005759 GO:GO:0006508 GO:GO:0004252 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:BC112880
IPI:IPI00700802 RefSeq:NP_001039879.1 UniGene:Bt.54443 HSSP:P0A6G7
ProteinModelPortal:Q2KHU4 SMR:Q2KHU4 STRING:Q2KHU4 MEROPS:S14.003
PRIDE:Q2KHU4 Ensembl:ENSBTAT00000019577 GeneID:535981
KEGG:bta:535981 CTD:8192 HOVERGEN:HBG001689 InParanoid:Q2KHU4
OrthoDB:EOG46T32D NextBio:20876866 Uniprot:Q2KHU4
Length = 272
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 81/246 (32%), Positives = 107/246 (43%)
Query: 3 VATASAPIFGLRTRMLATPPRTSPRTVNCNRNLSTS----------FISPFANGSVSSDF 52
VA P G R P RT + RNL + + G + D
Sbjct: 12 VAAGLCPALGPRLAARFPPQRTPENRLAPQRNLHATAARALPLIPIVVEQTGRGERAYDI 71
Query: 53 SG--LRLRPDC-LNP--DSFCKSKPRSPVITMYEDVEKPIYLYINSTGTTKGGEKLGYET 107
LR R C + P DS + E +KPI++YINS G G T
Sbjct: 72 YSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GVVT 123
Query: 108 EAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXXXXXXXXXXXPSSTIMIKQPIGRIEGQ 167
AIYD M Y+ PI T CVG P+S IMI QP G GQ
Sbjct: 124 SGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQ 183
Query: 168 ATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYT 227
ATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 184 ATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLV- 242
Query: 228 EKSPED 233
P+D
Sbjct: 243 -HPPQD 247
>FB|FBgn0032229 [details] [associations]
symbol:CG5045 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:AE014134 GO:GO:0006508 GO:GO:0004252 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HSSP:P19245 EMBL:AY119497 EMBL:FM245207
RefSeq:NP_609388.1 UniGene:Dm.11171 SMR:Q9VKY3 MINT:MINT-974885
STRING:Q9VKY3 EnsemblMetazoa:FBtr0080000 EnsemblMetazoa:FBtr0332189
GeneID:34402 KEGG:dme:Dmel_CG5045 UCSC:CG5045-RA
FlyBase:FBgn0032229 InParanoid:Q9VKY3 OrthoDB:EOG4VHHP8
GenomeRNAi:34402 NextBio:788329 Uniprot:Q9VKY3
Length = 253
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 78/216 (36%), Positives = 100/216 (46%)
Query: 32 NRNLSTSFISPFANGSVSSD-FSGL-RLRPDCL--N-PDSFCKSKPRSPVITMYEDVEKP 86
N NL + G + D FS L + R CL N D + + E+V KP
Sbjct: 26 NINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKP 85
Query: 87 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXXXXXXX 146
I+LYINS G G T AIYD M YVKPPI T CVG
Sbjct: 86 IHLYINSPG--------GVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGM 137
Query: 147 XXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 206
P++ IMI QP G +GQATD+ I +E+ +K +L +Y KH T E++ + R
Sbjct: 138 RYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMSGRMER 197
Query: 207 PKYFSPSEAVEYGIIDKVLYTEKSPE---DHGVVSD 239
+ +P EA GIID VL E PE + G SD
Sbjct: 198 DHFMTPEEAKVLGIIDHVL--EHPPETVSETGPASD 231
>UNIPROTKB|Q16740 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008233 "peptidase
activity" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 GO:GO:0005759 GO:GO:0006508 GO:GO:0004252
GO:GO:0008233 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA BRENDA:3.4.21.92
MEROPS:S14.003 CTD:8192 HOVERGEN:HBG001689 OrthoDB:EOG46T32D
EMBL:Z50853 EMBL:AK311973 EMBL:BC002956 IPI:IPI00003870 PIR:S68421
RefSeq:NP_006003.1 UniGene:Hs.515092 PDB:1TG6 PDBsum:1TG6
ProteinModelPortal:Q16740 SMR:Q16740 DIP:DIP-50384N IntAct:Q16740
STRING:Q16740 PhosphoSite:Q16740 DMDM:3023512 PaxDb:Q16740
PeptideAtlas:Q16740 PRIDE:Q16740 DNASU:8192 Ensembl:ENST00000245816
GeneID:8192 KEGG:hsa:8192 UCSC:uc002mem.1 GeneCards:GC19P006315
HGNC:HGNC:2084 HPA:HPA010649 MIM:601119 neXtProt:NX_Q16740
PharmGKB:PA26610 InParanoid:Q16740 PhylomeDB:Q16740
EvolutionaryTrace:Q16740 GenomeRNAi:8192 NextBio:30886
ArrayExpress:Q16740 Bgee:Q16740 CleanEx:HS_CLPP
Genevestigator:Q16740 GermOnline:ENSG00000125656 Uniprot:Q16740
Length = 277
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 61/153 (39%), Positives = 81/153 (52%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E +KPI++YINS G G T AIYD M Y+ PI T CVG
Sbjct: 109 ESNKKPIHMYINSPG--------GVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLA 160
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP G GQATD+ I +E+ +K +L +YAKH ++ + I
Sbjct: 161 AGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVI 220
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
E+ + R +Y SP EA E+GI+DKVL P+D
Sbjct: 221 ESAMERDRYMSPMEAQEFGILDKVLV--HPPQD 251
>MGI|MGI:1858213 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISA] [GO:0008233 "peptidase
activity" evidence=ISA] [GO:0008236 "serine-type peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 MGI:MGI:1858213
GO:GO:0005739 GO:GO:0005524 GO:GO:0005759 GO:GO:0004252
GO:GO:0006515 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA BRENDA:3.4.21.92 MEROPS:S14.003 CTD:8192
HOVERGEN:HBG001689 OrthoDB:EOG46T32D EMBL:AJ005253 EMBL:AJ012249
EMBL:AJ012250 EMBL:AJ012251 EMBL:AJ012252 EMBL:AJ012253
EMBL:AK004024 EMBL:AK145765 EMBL:AK168053 EMBL:BC001998
IPI:IPI00133270 RefSeq:NP_059089.1 UniGene:Mm.287892
ProteinModelPortal:O88696 SMR:O88696 STRING:O88696
PhosphoSite:O88696 REPRODUCTION-2DPAGE:IPI00133270
REPRODUCTION-2DPAGE:O88696 PaxDb:O88696 PRIDE:O88696
Ensembl:ENSMUST00000002735 GeneID:53895 KEGG:mmu:53895
UCSC:uc008ddm.2 InParanoid:O88696 NextBio:310791 Bgee:O88696
Genevestigator:O88696 GermOnline:ENSMUSG00000002660 Uniprot:O88696
Length = 272
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 61/153 (39%), Positives = 81/153 (52%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E +KPI++YINS G G T AIYD M Y+ PI T CVG
Sbjct: 105 ESNKKPIHMYINSPG--------GVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLA 156
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP G GQATD+ I +E+ +K +L +YAKH ++ + I
Sbjct: 157 AGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVI 216
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
E+ + R +Y SP EA E+GI+DKVL P+D
Sbjct: 217 ESAMERDRYMSPMEAQEFGILDKVLV--HPPQD 247
>RGD|1588583 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] NCBI:XP_001055676 REFSEQ:XM_001055676
Length = 272
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 61/153 (39%), Positives = 81/153 (52%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E +KPI++YINS G G T AIYD M Y+ PI T CVG
Sbjct: 105 ESNKKPIHMYINSPG--------GVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLA 156
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP G GQATD+ I +E+ +K +L +YAKH ++ + I
Sbjct: 157 AGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKRQLYNIYAKHTKQSLQVI 216
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
E+ + R +Y SP EA E+GI+DKVL P+D
Sbjct: 217 ESAMERDRYMSPMEAQEFGILDKVLV--HPPQD 247
>ZFIN|ZDB-GENE-030131-7860 [details] [associations]
symbol:clpp "ClpP caseinolytic peptidase,
ATP-dependent, proteolytic subunit homolog (E. coli)" species:7955
"Danio rerio" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
ZFIN:ZDB-GENE-030131-7860 GO:GO:0006508 GO:GO:0004252 EMBL:BX649502
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HOVERGEN:HBG001689 IPI:IPI00481150
UniGene:Dr.76726 SMR:Q5PNM4 Ensembl:ENSDART00000006604
Ensembl:ENSDART00000131951 InParanoid:Q5PNM4 Uniprot:Q5PNM4
Length = 266
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 57/145 (39%), Positives = 77/145 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E KPI++YINS G G T AIYD M Y+ PI T CVG
Sbjct: 80 ESNNKPIHMYINSPG--------GVVTSGLAIYDTMQYILNPISTWCVGQAASMGSLLLA 131
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P++ IM+ QP G GQATD+ I +E+ +K ++ +Y+KH G+ E I
Sbjct: 132 AGTAGMRHSLPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINNIYSKHTGQLLETI 191
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
E+ + R +Y SP EA ++GIIDKVL
Sbjct: 192 ESVMERDRYMSPMEAQDFGIIDKVL 216
>TIGR_CMR|CJE_0185 [details] [associations]
symbol:CJE_0185 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:195099 "Campylobacter jejuni RM1221"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000025
GenomeReviews:CP000025_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ERDYWMD
RefSeq:YP_178209.1 ProteinModelPortal:Q5HWX6 SMR:Q5HWX6
STRING:Q5HWX6 GeneID:3230948 KEGG:cjr:CJE0185 PATRIC:20042079
BioCyc:CJEJ195099:GJC0-190-MONOMER Uniprot:Q5HWX6
Length = 194
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 62/150 (41%), Positives = 78/150 (52%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED K IYLYINS G G T F+IYD M Y+KP + T+C+G
Sbjct: 53 EDPTKDIYLYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLS 104
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP+G GQATD+EI KE+ +K L + AK+ + +I
Sbjct: 105 CGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKI 164
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKS 230
D R + S EA EYG+IDKVL EKS
Sbjct: 165 AKDTERDFFMSAQEAKEYGLIDKVL--EKS 192
>TIGR_CMR|CBU_0738 [details] [associations]
symbol:CBU_0738 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:227377 "Coxiella burnetii RSA 493"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE016828
GenomeReviews:AE016828_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ARMNELM
RefSeq:NP_819764.1 PDB:3Q7H PDBsum:3Q7H ProteinModelPortal:Q83DJ2
SMR:Q83DJ2 GeneID:1208629 KEGG:cbu:CBU_0738 PATRIC:17930167
BioCyc:CBUR227377:GJ7S-735-MONOMER Uniprot:Q83DJ2
Length = 195
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 56/144 (38%), Positives = 77/144 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E+ K I LYINS G G T A AIYD M +VKP + TLC+G
Sbjct: 55 ENPNKDINLYINSPG--------GAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLA 106
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P S++MI Q +G +GQ TD++I K+ + V +L ++ AKH GK E++
Sbjct: 107 GGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERV 166
Query: 201 EADIRRPKYFSPSEAVEYGIIDKV 224
E D R + +P EAVEYG+ID +
Sbjct: 167 EKDTNRDYFLTPEEAVEYGLIDSI 190
>UNIPROTKB|F1SBT2 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9823 "Sus scrofa" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:CU929921
EMBL:AEMK01192585 EMBL:FP312741 Ensembl:ENSSSCT00000014789
Uniprot:F1SBT2
Length = 273
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 60/153 (39%), Positives = 79/153 (51%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E +KPI++YINS G G T AIYD M Y+ PI T CVG
Sbjct: 105 ESNKKPIHMYINSPG--------GVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLA 156
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP G GQATD+ I +E+ +K +L +YAKH ++ + I
Sbjct: 157 AGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVI 216
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
+ R +Y SP EA E+GI+DKVL P+D
Sbjct: 217 VKAMERDRYMSPMEAQEFGILDKVLV--HPPQD 247
>TIGR_CMR|APH_0970 [details] [associations]
symbol:APH_0970 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000235
GenomeReviews:CP000235_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 RefSeq:YP_505537.1
ProteinModelPortal:Q2GJB4 SMR:Q2GJB4 STRING:Q2GJB4 GeneID:3930516
KEGG:aph:APH_0970 PATRIC:20950656 OMA:ARMNELM
BioCyc:APHA212042:GHPM-982-MONOMER Uniprot:Q2GJB4
Length = 197
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 57/153 (37%), Positives = 82/153 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED EK I +YINS G G T +IYD M Y+KP + TLC+G
Sbjct: 54 EDPEKDISMYINSPG--------GVVTAGLSIYDTMQYIKPNVATLCLGQAASMGSLLLC 105
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S +MI QP G GQATD+EI +E+ +K L +++ +H GK+ E+I
Sbjct: 106 AGAPGMRCALPNSRVMIHQPSGGFRGQATDIEIHAREILEIKRRLNEIFVRHTGKSLEEI 165
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
E+ + R + +A ++GIIDKV+ EK E+
Sbjct: 166 ESSMERDNFMIAEKARDFGIIDKVI--EKRIEE 196
>TIGR_CMR|NSE_0752 [details] [associations]
symbol:NSE_0752 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000237
GenomeReviews:CP000237_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_506627.1 ProteinModelPortal:Q2GD19 SMR:Q2GD19
STRING:Q2GD19 GeneID:3931620 KEGG:nse:NSE_0752 PATRIC:22681509
ProtClustDB:CLSK2527690 BioCyc:NSEN222891:GHFU-763-MONOMER
Uniprot:Q2GD19
Length = 201
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 54/149 (36%), Positives = 79/149 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E+ +K I++YINS G G T +IYD M Y+KP + T+CVG
Sbjct: 54 ENPDKDIFMYINSPG--------GVVTAGLSIYDTMQYIKPSVSTVCVGQAASAASLILA 105
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P S +M+ QP G + GQATD+EI KE+ +K + ++Y KH G+T ++I
Sbjct: 106 SGAEGKRFALPHSRVMVHQPSGGVRGQATDMEIHVKEILQLKRMINEIYQKHTGETIKKI 165
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEK 229
E + R + SP EA + GIID ++ K
Sbjct: 166 ETLLERDTFLSPEEAKKVGIIDDIITQRK 194
>TIGR_CMR|CPS_3785 [details] [associations]
symbol:CPS_3785 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:167879 "Colwellia psychrerythraea 34H"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000083
GenomeReviews:CP000083_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA RefSeq:YP_270452.1
ProteinModelPortal:Q47XL8 SMR:Q47XL8 STRING:Q47XL8 GeneID:3522356
KEGG:cps:CPS_3785 PATRIC:21470483
BioCyc:CPSY167879:GI48-3807-MONOMER Uniprot:Q47XL8
Length = 220
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 55/145 (37%), Positives = 78/145 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E +K IYLYINS G G T AIYD M ++KP I T+C+G
Sbjct: 78 ESPDKDIYLYINSPG--------GSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLS 129
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P++ +MI QP+G +GQA+D EI KE+ +K +L KL A+H G+T +++
Sbjct: 130 GGEKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEILFIKDKLNKLMAEHTGQTLDKV 189
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
D R + S AVEYG++D +L
Sbjct: 190 SQDTDRDNFLSAEAAVEYGLVDSIL 214
>TIGR_CMR|ECH_0901 [details] [associations]
symbol:ECH_0901 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
ProtClustDB:PRK00277 RefSeq:YP_507695.1 ProteinModelPortal:Q2GFT8
SMR:Q2GFT8 STRING:Q2GFT8 GeneID:3928015 KEGG:ech:ECH_0901
PATRIC:20577202 OMA:RDPVEIF BioCyc:ECHA205920:GJNR-904-MONOMER
Uniprot:Q2GFT8
Length = 199
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E+ EK I +YINS G G T +IYD M Y+KP + TLC+G
Sbjct: 54 ENPEKEICMYINSPG--------GVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLA 105
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP G +GQATD+EI KE+ ++K L +Y KH G+ ++
Sbjct: 106 AGEPGMRYALPNSRIMIHQPSGGFQGQATDIEIHAKEILDIKGRLNDIYVKHTGRDLSEV 165
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
A++ R + +A ++GIIDKV+
Sbjct: 166 VANMERDNFMRAEKAKDFGIIDKVI 190
>UNIPROTKB|P63786 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:196620 "Staphylococcus aureus subsp. aureus MW2"
[GO:0042802 "identical protein binding" evidence=IPI]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 MEROPS:S14.001
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:BA000033 RefSeq:NP_645547.1 PDB:3ST9
PDB:3STA PDBsum:3ST9 PDBsum:3STA ProteinModelPortal:P63786
SMR:P63786 STRING:P63786 EnsemblBacteria:EBSTAT00000026409
GeneID:1002841 GenomeReviews:BA000033_GR KEGG:sam:MW0730
PATRIC:19568014 BioCyc:SAUR196620:GJ9Z-751-MONOMER BindingDB:P63786
EvolutionaryTrace:P63786 Uniprot:P63786
Length = 195
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/148 (34%), Positives = 81/148 (54%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
+D EK IYLYINS G G T FAIYD + ++KP + T+C+G
Sbjct: 54 QDSEKDIYLYINSPG--------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLA 105
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P++ +MI QP+G +GQAT++EIA + + +L ++ ++ G++ E+I
Sbjct: 106 AGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKI 165
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTE 228
+ D R + + EA EYG+ID+V+ E
Sbjct: 166 QKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
>TIGR_CMR|VC_1922 [details] [associations]
symbol:VC_1922 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 PIR:G82139 RefSeq:NP_231556.1
ProteinModelPortal:Q9KQS6 SMR:Q9KQS6 DNASU:2613551 GeneID:2613551
KEGG:vch:VC1922 PATRIC:20082888 Uniprot:Q9KQS6
Length = 200
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 53/145 (36%), Positives = 80/145 (55%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E+ +K I+LYINS G G T +IYD M ++KP + T+C+G
Sbjct: 59 ENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 110
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S +MI QP+G +GQA+D++I +E+ +K +L +L A+H G+ E I
Sbjct: 111 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVI 170
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
E D R + S +AVEYG++D VL
Sbjct: 171 ERDTDRDNFMSADQAVEYGLVDAVL 195
>TIGR_CMR|GSU_1792 [details] [associations]
symbol:GSU_1792 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE017180
GenomeReviews:AE017180_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_952842.1 ProteinModelPortal:Q74C82 SMR:Q74C82
GeneID:2686403 KEGG:gsu:GSU1792 PATRIC:22026431
BioCyc:GSUL243231:GH27-1812-MONOMER Uniprot:Q74C82
Length = 199
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED +K I+LYINS G G T AIYD M Y+K P+ T+CVG
Sbjct: 53 EDPDKDIHLYINSPG--------GVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLS 104
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
S IMI QP+G +GQATD+ I +E+ +K L ++ A++ G+ ++
Sbjct: 105 GGEKGKRFSLKHSRIMIHQPLGGFQGQATDIHIHAQEILKLKKRLNEILAENTGQQLAKV 164
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
EAD R + S +EA +YGIID ++
Sbjct: 165 EADTERDYFMSGAEAKDYGIIDNII 189
>TIGR_CMR|SO_1794 [details] [associations]
symbol:SO_1794 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:211586 "Shewanella oneidensis MR-1"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE014299
GenomeReviews:AE014299_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_717403.1 ProteinModelPortal:Q8EG19 SMR:Q8EG19
GeneID:1169567 KEGG:son:SO_1794 PATRIC:23523211 Uniprot:Q8EG19
Length = 202
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 52/145 (35%), Positives = 78/145 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E +K I+LYINS G G T AIYD M ++KP + T+C+G
Sbjct: 62 ESPDKDIFLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLA 113
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S +MI QP+G +GQA+D+ I +E+ +K +L ++ A H G+ E I
Sbjct: 114 GGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVI 173
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
E D R + S ++AVEYG++D V+
Sbjct: 174 ERDTDRDNFMSATQAVEYGLVDAVM 198
>TAIR|locus:2031070 [details] [associations]
symbol:CLPR1 "CLP protease proteolytic subunit 1"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009532 "plastid
stroma" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC015445 eggNOG:COG0740
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022330
EMBL:AY045677 EMBL:BT000572 IPI:IPI00529610 PIR:T52451
RefSeq:NP_564560.1 UniGene:At.23793 UniGene:At.75198 PDB:1R96
PDBsum:1R96 ProteinModelPortal:Q9XJ35 SMR:Q9XJ35 IntAct:Q9XJ35
STRING:Q9XJ35 PaxDb:Q9XJ35 PRIDE:Q9XJ35 EnsemblPlants:AT1G49970.1
GeneID:841420 KEGG:ath:AT1G49970 GeneFarm:810 TAIR:At1g49970
HOGENOM:HOG000006365 InParanoid:Q9XJ35 OMA:AIDMWIK PhylomeDB:Q9XJ35
ProtClustDB:CLSN2688619 Genevestigator:Q9XJ35 Uniprot:Q9XJ35
Length = 387
Score = 240 (89.5 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 56/153 (36%), Positives = 79/153 (51%)
Query: 80 YEDVEKPIYLYINSTGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXX 138
Y++ KPIYLYINS GT + E +G ETEA+AI D + Y K ++T+ G
Sbjct: 205 YDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAML 264
Query: 139 XXXXXXXXXXXXPSSTIMIKQP-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 197
P S+ + P + R G A D+ I KE+ ++L AK GK+
Sbjct: 265 LSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSK 324
Query: 198 EQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 230
EQI DI+RPKY A++YGI DK+ ++ S
Sbjct: 325 EQINEDIKRPKYLQAQAAIDYGIADKIADSQDS 357
>TIGR_CMR|BA_2788 [details] [associations]
symbol:BA_2788 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 RefSeq:NP_845137.1 RefSeq:YP_019430.1
RefSeq:YP_028858.1 ProteinModelPortal:Q81PL4 SMR:Q81PL4
MEROPS:S14.001 DNASU:1086459 EnsemblBacteria:EBBACT00000008369
EnsemblBacteria:EBBACT00000015150 EnsemblBacteria:EBBACT00000020004
GeneID:1086459 GeneID:2817074 GeneID:2849926 KEGG:ban:BA_2788
KEGG:bar:GBAA_2788 KEGG:bat:BAS2599 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 OMA:DIVTICI ProtClustDB:CLSK916804
BioCyc:BANT260799:GJAJ-2663-MONOMER
BioCyc:BANT261594:GJ7F-2758-MONOMER InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 Uniprot:Q81PL4
Length = 193
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 55/149 (36%), Positives = 78/149 (52%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED EK I+LYINS G G T FAI D M +KP + TLC+G
Sbjct: 54 EDAEKDIFLYINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLL 105
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IMI QP+G +GQAT++EI K + +K ++ K+ A+ G+ E++
Sbjct: 106 SGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERV 165
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEK 229
D R + + EA YGI+D V+ T+K
Sbjct: 166 AHDTERDYFMTAEEAKAYGIVDDVV-TKK 193
>UNIPROTKB|G4MLM6 [details] [associations]
symbol:MGG_06757 "ATP-dependent Clp protease proteolytic
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:CM001231
MEROPS:S14.001 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:XP_003709471.1 ProteinModelPortal:G4MLM6
EnsemblFungi:MGG_06757T0 GeneID:2684930 KEGG:mgr:MGG_06757
Uniprot:G4MLM6
Length = 274
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 65/208 (31%), Positives = 105/208 (50%)
Query: 44 ANGSVSSD-FSGL-RLRPDCLN-P-DSFCKSKPRSPVITMYEDV-EKPIYLYINSTGTTK 98
A G +SD FS L + R CLN P D + ++ + ++ + +D KPI LYINS G
Sbjct: 57 AGGWRTSDIFSKLLQERIVCLNGPIDDWTQASVTAQLLWLEQDSPHKPITLYINSPG--- 113
Query: 99 GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXXXXXXXXXXXPSSTIMIK 158
G + AIYD M Y+ P+ T+CVG P S IM+
Sbjct: 114 -----GQVSSGLAIYDTMNYISSPVHTVCVGMAASMGAILLLGGAAGQRYALPHSQIMVH 168
Query: 159 QPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF----GK---TPEQIEADIRRPKYFS 211
QP+G +GQA+D+ I K++ +++++ + +H G+ ++++ + R KY +
Sbjct: 169 QPLGSTQGQASDIIIYAKQITRIRSQINDIMRRHLNTAAGRERFAAQEVDEMMERDKYLT 228
Query: 212 PSEAVEYGIIDKVLYTEKSPEDHGVVSD 239
EAVE GI+DK+L T +S ++D
Sbjct: 229 ADEAVELGIVDKIL-TSRSDAVASALND 255
>TAIR|locus:2178282 [details] [associations]
symbol:NCLPP7 "nuclear-encoded CLP protease P7"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009840
"chloroplastic endopeptidase Clp complex" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0009532 "plastid stroma"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
GO:GO:0006508 EMBL:AB006708 GO:GO:0004252 GO:GO:0050897
GO:GO:0009535 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA EMBL:AK118523
EMBL:BT005261 IPI:IPI00533430 RefSeq:NP_568427.1 UniGene:At.31024
PDB:1R8V PDBsum:1R8V ProteinModelPortal:Q9FN42 SMR:Q9FN42
STRING:Q9FN42 MEROPS:S14.A02 PaxDb:Q9FN42 PRIDE:Q9FN42
EnsemblPlants:AT5G23140.1 GeneID:832378 KEGG:ath:AT5G23140
GeneFarm:805 TAIR:At5g23140 InParanoid:Q9FN42 PhylomeDB:Q9FN42
ProtClustDB:CLSN2917700 Genevestigator:Q9FN42 GO:GO:0009840
Uniprot:Q9FN42
Length = 241
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 66/218 (30%), Positives = 104/218 (47%)
Query: 16 RMLATPPRTSPRTVNCNR---NLSTSFISPFANGSVSSD-FSGL-RLRPDCLN-P--DSF 67
+ML++ P + ++ R +L I + G + D FS L + R C+N P D
Sbjct: 10 KMLSSTPSSMATSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDT 69
Query: 68 CKSKPRSPVITMYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLC 127
+ E+ KPI++Y+NS G G+ T AIYD M Y++ PI T+C
Sbjct: 70 SHVVVAQLLYLESENPSKPIHMYLNSPG--------GHVTAGLAIYDTMQYIRSPISTIC 121
Query: 128 VGNXXXXXXXXXXXXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVK 187
+G P++T+MI QP G GQA D+ I K++ V L +
Sbjct: 122 LGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNE 181
Query: 188 LYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 225
LY KH G+ + + ++ R + +P EA +GIID+V+
Sbjct: 182 LYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVI 219
>TAIR|locus:2163538 [details] [associations]
symbol:CLPP4 "CLP protease P4" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009840 "chloroplastic endopeptidase Clp complex"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009532 "plastid stroma" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0048510 GO:GO:0009535
eggNOG:COG0740 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022329 EMBL:AJ000930
EMBL:AB018113 EMBL:AY042832 EMBL:BT006321 EMBL:AY087717
IPI:IPI00548920 PIR:T52452 RefSeq:NP_568644.1 UniGene:At.387
UniGene:At.67124 PDB:1R91 PDBsum:1R91 ProteinModelPortal:Q94B60
SMR:Q94B60 IntAct:Q94B60 STRING:Q94B60 MEROPS:S14.010 PaxDb:Q94B60
PRIDE:Q94B60 EnsemblPlants:AT5G45390.1 GeneID:834575
KEGG:ath:AT5G45390 GeneFarm:801 TAIR:At5g45390 InParanoid:Q94B60
OMA:ERDYWMD PhylomeDB:Q94B60 ProtClustDB:CLSN2689933
Genevestigator:Q94B60 Uniprot:Q94B60
Length = 292
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 70/218 (32%), Positives = 104/218 (47%)
Query: 15 TRMLATPPRT-SPRTVN-CNRNLSTSFISPFANGSVSSDFSGLRLRPDCL----NPDSFC 68
T++++ P RT SP + N ++ S A SD GL LR + + D F
Sbjct: 41 TKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFV 100
Query: 69 KSKPRSPVITM-YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLC 127
S ++ + +D +K I L+INS G G + AIYDV+ V+ + T+
Sbjct: 101 ADAIMSQLLLLDAKDPKKDIKLFINSPG--------GSLSATMAIYDVVQLVRADVSTIA 152
Query: 128 VGNXXXXXXXXXXXXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVK 187
+G P++ IMI QP+G GQA DVEI KE+ + K +
Sbjct: 153 LGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTS 212
Query: 188 LYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 225
+ A ++ EQ+ DI R +Y SP EAVEYG+ID V+
Sbjct: 213 IIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250
>TIGR_CMR|BA_5380 [details] [associations]
symbol:BA_5380 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:NP_847553.1
RefSeq:YP_022039.1 RefSeq:YP_031239.1 ProteinModelPortal:Q81X63
SMR:Q81X63 IntAct:Q81X63 DNASU:1084924
EnsemblBacteria:EBBACT00000008224 EnsemblBacteria:EBBACT00000015397
EnsemblBacteria:EBBACT00000024106 GeneID:1084924 GeneID:2818633
GeneID:2848145 KEGG:ban:BA_5380 KEGG:bar:GBAA_5380 KEGG:bat:BAS5000
BioCyc:BANT260799:GJAJ-5075-MONOMER
BioCyc:BANT261594:GJ7F-5251-MONOMER Uniprot:Q81X63
Length = 193
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 50/149 (33%), Positives = 80/149 (53%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
+D EK I++YINS G G T AIYD M ++KP + T+C+G
Sbjct: 54 QDPEKDIHIYINSPG--------GSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLA 105
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S MI QP+G +GQAT++EIA K + ++ +L ++ A G+ E +
Sbjct: 106 AGEKGKRYALPNSEAMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVL 165
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEK 229
+ D R + + +A+EYG+IDK+ +T +
Sbjct: 166 QRDTDRDNFMTAEKALEYGLIDKI-FTNR 193
>TIGR_CMR|SPO_1003 [details] [associations]
symbol:SPO_1003 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009368
"endopeptidase Clp complex" evidence=ISS] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA
ProtClustDB:PRK00277 RefSeq:YP_166255.1 ProteinModelPortal:Q5LUQ0
SMR:Q5LUQ0 GeneID:3193881 KEGG:sil:SPO1003 PATRIC:23375299
Uniprot:Q5LUQ0
Length = 209
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 51/153 (33%), Positives = 75/153 (49%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
E+ K I +YINS G G T +IYD M Y+KP TL +G
Sbjct: 63 ENPNKEISIYINSPG--------GVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLA 114
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P+S IM+ QP G +GQA+D+ I E + +K L +Y KH G+T + +
Sbjct: 115 GGEKGMRFSLPNSRIMVHQPSGGYQGQASDIMIHAAETQKLKDRLYDIYVKHTGQTKKAV 174
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
E + R + SP EA E+G ID+++ + +D
Sbjct: 175 EKALDRDNFMSPEEAKEWGHIDEIVESRSKGDD 207
>TAIR|locus:2196120 [details] [associations]
symbol:CLPP5 "nuclear encoded CLP protease 5"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508
GO:GO:0009941 GO:GO:0004252 EMBL:AC022521 GO:GO:0009534
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022326 EMBL:AJ012278
EMBL:BT024859 EMBL:AY084394 IPI:IPI00546407 PIR:T52455
RefSeq:NP_563657.1 UniGene:At.21093 PDB:1R92 PDBsum:1R92
ProteinModelPortal:Q9S834 SMR:Q9S834 IntAct:Q9S834 STRING:Q9S834
MEROPS:S14.A01 PaxDb:Q9S834 PRIDE:Q9S834 ProMEX:Q9S834
EnsemblPlants:AT1G02560.1 GeneID:839433 KEGG:ath:AT1G02560
GeneFarm:806 TAIR:At1g02560 InParanoid:Q9S834 OMA:QGLGMVP
PhylomeDB:Q9S834 ProtClustDB:CLSN2687625 Genevestigator:Q9S834
Uniprot:Q9S834
Length = 298
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 51/144 (35%), Positives = 71/144 (49%)
Query: 82 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXX 141
D K I +Y+NS G G T AI+D M +++P + T+CVG
Sbjct: 150 DPTKDIVMYVNSPG--------GSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA 201
Query: 142 XXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 201
P+S IMI QP+G +G TD++I EM + KA L A H G++ E+I
Sbjct: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKIN 261
Query: 202 ADIRRPKYFSPSEAVEYGIIDKVL 225
D R + S EA EYG+ID V+
Sbjct: 262 QDTDRDFFMSAKEAKEYGLIDGVI 285
>TIGR_CMR|DET_0710 [details] [associations]
symbol:DET_0710 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000027
GenomeReviews:CP000027_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
ProtClustDB:PRK00277 OMA:ERDYWMD RefSeq:YP_181451.1
ProteinModelPortal:Q3Z8J8 SMR:Q3Z8J8 STRING:Q3Z8J8 GeneID:3229949
KEGG:det:DET0710 PATRIC:21608483 BioCyc:DETH243164:GJNF-711-MONOMER
Uniprot:Q3Z8J8
Length = 200
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 51/153 (33%), Positives = 79/153 (51%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED +K I LYI+S G G + A+YD M ++P + T+CVG
Sbjct: 58 EDPDKDISLYIHSPG--------GVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLC 109
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P++TI + Q +G +GQA+D+EIA +E+ + L + KH G+ E+I
Sbjct: 110 AGAKGKRYALPNATIHMHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQPMEKI 169
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
D R Y + +AVEYG+ID++L + PE+
Sbjct: 170 IHDSDRDYYLNAQQAVEYGLIDEIL---QKPEN 199
>TAIR|locus:2033344 [details] [associations]
symbol:CLPP3 "CLP protease proteolytic subunit 3"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC013288 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AF032123 EMBL:AB022328 EMBL:AC079285
EMBL:AF370528 EMBL:AY072526 EMBL:AY087349 IPI:IPI00538968
PIR:T52041 PIR:T52453 RefSeq:NP_564880.1 UniGene:At.21167 PDB:1R90
PDBsum:1R90 ProteinModelPortal:Q9SXJ6 SMR:Q9SXJ6 IntAct:Q9SXJ6
STRING:Q9SXJ6 MEROPS:S14.A03 PaxDb:Q9SXJ6 PRIDE:Q9SXJ6
ProMEX:Q9SXJ6 EnsemblPlants:AT1G66670.1 GeneID:842985
KEGG:ath:AT1G66670 GeneFarm:804 TAIR:At1g66670 InParanoid:Q9SXJ6
OMA:NMLLRQR PhylomeDB:Q9SXJ6 ProtClustDB:CLSN2689048
Genevestigator:Q9SXJ6 Uniprot:Q9SXJ6
Length = 309
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 72/235 (30%), Positives = 109/235 (46%)
Query: 3 VATASAPIFGLRTRM-LATPPRTSPRTVNCNRNLSTSFI-----SPFANGSVSS-DFSGL 55
+ S P F +R+ M L+ PPR +T++ N ++S+ I SP S D + +
Sbjct: 34 IPKTSKP-FCVRSSMSLSKPPR---QTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNM 89
Query: 56 RLRPDCLNPDSFCKSKPRSPVITMY-----EDVEKPIYLYINSTGTTKGGEKLGYETEAF 110
LR + S VI+ ED E+ I L+INS G G T
Sbjct: 90 LLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPG--------GSITAGM 141
Query: 111 AIYDVMGYVKPPIFTLCVGNXXXXXXXXXXXXXXXXXXXXPSSTIMIKQPIGRIEGQATD 170
IYD M K + T+C+G P+S +MI QP+G G+AT+
Sbjct: 142 GIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATE 201
Query: 171 VEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 225
+ I +EM K +L K++++ GK +IE+D R + +P EA EYG+ID V+
Sbjct: 202 MSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVI 256
>GENEDB_PFALCIPARUM|PF14_0348 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease
proteolytic subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0020011 "apicoplast" evidence=ISS] InterPro:IPR001907
PRINTS:PR00127 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
EMBL:AE014187 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2
PDBsum:4HNK HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 46/152 (30%), Positives = 75/152 (49%)
Query: 80 YEDVEKPIYLYINSTGTTKGGEKLGYE--TEAFAIYDVMGYVKPPIFTLCVGNXXXXXXX 137
YE KPI+LYINSTG + + T+ +I DV+ Y+ ++T C+G
Sbjct: 93 YESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDVINYISSDVYTYCLGKAYGIACI 152
Query: 138 XXXXXXXXXXXXXPSSTIMIKQPIGRIE-GQATDVEIARKEMKNVKAELVKLYAKHFGKT 196
+S+ + Q I QAT++EI KE+ N K +++++ +K+ K
Sbjct: 153 LASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKD 212
Query: 197 PEQIEADIRRPKYFSPSEAVEYGIIDKVLYTE 228
I + R KYF+ EAV++ +ID +L E
Sbjct: 213 TNVISNVLERDKYFNADEAVDFKLIDHILEKE 244
>UNIPROTKB|Q8IL98 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease proteolytic
subunit" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:AE014187
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2 PDBsum:4HNK
HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 46/152 (30%), Positives = 75/152 (49%)
Query: 80 YEDVEKPIYLYINSTGTTKGGEKLGYE--TEAFAIYDVMGYVKPPIFTLCVGNXXXXXXX 137
YE KPI+LYINSTG + + T+ +I DV+ Y+ ++T C+G
Sbjct: 93 YESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDVINYISSDVYTYCLGKAYGIACI 152
Query: 138 XXXXXXXXXXXXXPSSTIMIKQPIGRIE-GQATDVEIARKEMKNVKAELVKLYAKHFGKT 196
+S+ + Q I QAT++EI KE+ N K +++++ +K+ K
Sbjct: 153 LASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKD 212
Query: 197 PEQIEADIRRPKYFSPSEAVEYGIIDKVLYTE 228
I + R KYF+ EAV++ +ID +L E
Sbjct: 213 TNVISNVLERDKYFNADEAVDFKLIDHILEKE 244
>TAIR|locus:2034625 [details] [associations]
symbol:CLP2 "CLP protease proteolytic subunit 2"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0009534 GO:GO:0010287
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022327 EMBL:AC025416
EMBL:AY057617 EMBL:AY062770 EMBL:AY081641 IPI:IPI00516669
PIR:T52454 RefSeq:NP_563907.1 UniGene:At.20902 PDB:1R97 PDBsum:1R97
ProteinModelPortal:Q9XJ36 SMR:Q9XJ36 IntAct:Q9XJ36 STRING:Q9XJ36
PaxDb:Q9XJ36 PRIDE:Q9XJ36 ProMEX:Q9XJ36 EnsemblPlants:AT1G12410.1
GeneID:837797 KEGG:ath:AT1G12410 GeneFarm:808 TAIR:At1g12410
InParanoid:Q9XJ36 OMA:IWNALYR PhylomeDB:Q9XJ36
ProtClustDB:CLSN2687781 Genevestigator:Q9XJ36 Uniprot:Q9XJ36
Length = 279
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 49/152 (32%), Positives = 73/152 (48%)
Query: 82 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXX 141
D + IY+Y+N G G T + AIYD M +K P+ T CVG
Sbjct: 125 DDSRRIYMYLNGPG--------GDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAA 176
Query: 142 XXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 201
P S I ++ P G GQA D++ KE+ ++ L AK+ G+ E++
Sbjct: 177 GEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVF 236
Query: 202 ADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 233
D+ R K F+ EA+EYG+IDK++ + ED
Sbjct: 237 KDLSRVKRFNAEEAIEYGLIDKIVRPPRIKED 268
>WB|WBGene00014172 [details] [associations]
symbol:clpp-1 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005759 GO:GO:0006508 GO:GO:0010171
GO:GO:0040017 GO:GO:0040018 GO:GO:0004252 GO:GO:0040035
GO:GO:0030163 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
InterPro:IPR023562 PANTHER:PTHR10381 EMBL:Z49073 PIR:C88288
RefSeq:NP_001254239.1 RefSeq:NP_001254240.1 RefSeq:NP_001254241.1
ProteinModelPortal:Q27539 SMR:Q27539 STRING:Q27539 PaxDb:Q27539
EnsemblMetazoa:ZK970.2d GeneID:174594 KEGG:cel:CELE_ZK970.2
CTD:174594 WormBase:ZK970.2a WormBase:ZK970.2b WormBase:ZK970.2d
GeneTree:ENSGT00390000005830 InParanoid:Q27539 OMA:LVHPPQA
BRENDA:3.4.21.92 NextBio:884698 Uniprot:Q27539
Length = 221
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 55 LRLRPDCL-NP-DSFCKSKPRSPVITMY-EDVEKPIYLYINSTGTTKGGEKLGYETEAFA 111
LR R CL P D F S + ++ + E +KPI++YINS G G T A
Sbjct: 47 LRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMYINSPG--------GSVTAGLA 98
Query: 112 IYDVMGYVKPPIFTLCVGNXXXXXXXXXXXXXXXXXXXXPSSTIMIKQPIGRIEGQATDV 171
IYD + + P+ T +G P+S IM+ QP G +G +D+
Sbjct: 99 IYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVHQPSGGAQGTCSDI 158
Query: 172 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV-LYTEKS 230
I +E+ +K L ++Y H G + ++IE + R ++ S EA+++G++D++ +
Sbjct: 159 VIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKFGLVDQIETHNGSM 218
Query: 231 PED 233
P D
Sbjct: 219 PSD 221
>UNIPROTKB|P63783 [details] [associations]
symbol:clpP2 "ATP-dependent Clp protease proteolytic
subunit 2" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006508 GO:GO:0004252 EMBL:BX842579 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
BRENDA:3.4.21.92 PIR:C70865 RefSeq:NP_216976.1 RefSeq:NP_337021.1
RefSeq:YP_006515897.1 ProteinModelPortal:P63783 SMR:P63783
IntAct:P63783 MEROPS:S14.009 PRIDE:P63783
EnsemblBacteria:EBMYCT00000002187 EnsemblBacteria:EBMYCT00000071970
GeneID:13319170 GeneID:888174 GeneID:925797 KEGG:mtc:MT2535
KEGG:mtu:Rv2460c KEGG:mtv:RVBD_2460c PATRIC:18127328
TubercuList:Rv2460c OMA:IQGQVSD ProtClustDB:PRK12553 Uniprot:P63783
Length = 214
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 51/150 (34%), Positives = 72/150 (48%)
Query: 82 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXX 141
D ++ I +YINS G GG T AIYD M YV+ I T+C+G
Sbjct: 67 DPDRDITMYINSPG---GGF-----TSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAA 118
Query: 142 XXXXXXXXXPSSTIMIKQPI--GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 199
P++ ++I QP G I+GQ +D+EI E++ ++ + A+H GK
Sbjct: 119 GTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGV 178
Query: 200 IEADIRRPKYFSPSEAVEYGIIDKVLYTEK 229
I D R K + EA +YGIID VL K
Sbjct: 179 IRKDTDRDKILTAEEAKDYGIIDTVLEYRK 208
>UNIPROTKB|P0A526 [details] [associations]
symbol:clpP1 "ATP-dependent Clp protease proteolytic
subunit 1" species:1773 "Mycobacterium tuberculosis" [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006508 GO:GO:0004252 EMBL:BX842579
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 PIR:D70865 RefSeq:NP_337022.1
RefSeq:YP_006515898.1 RefSeq:YP_177883.1 PDB:2C8T PDB:2CBY PDB:2CE3
PDBsum:2C8T PDBsum:2CBY PDBsum:2CE3 ProteinModelPortal:P0A526
SMR:P0A526 MEROPS:S14.008 PhosSite:P12071649 PRIDE:P0A526
EnsemblBacteria:EBMYCT00000001586 EnsemblBacteria:EBMYCT00000071224
GeneID:13319171 GeneID:888176 GeneID:925798 KEGG:mtc:MT2536
KEGG:mtu:Rv2461c KEGG:mtv:RVBD_2461c PATRIC:18127330
TubercuList:Rv2461c OMA:DPTRDIS ProtClustDB:PRK00277
EvolutionaryTrace:P0A526 Uniprot:P0A526
Length = 200
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 46/145 (31%), Positives = 70/145 (48%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED K I LYINS G G + AIYD M I T +G
Sbjct: 54 EDASKDISLYINSPG--------GSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLA 105
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 200
P + I++ QP+G + G A D+ I ++ +K E+ +L A+ G+ E+I
Sbjct: 106 AGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERI 165
Query: 201 EADIRRPKYFSPSEAVEYGIIDKVL 225
EAD R ++F+ +EA+EYG +D ++
Sbjct: 166 EADSDRDRWFTAAEALEYGFVDHII 190
>GENEDB_PFALCIPARUM|PFC0310c [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease,
putative" species:5833 "Plasmodium falciparum" [GO:0030163 "protein
catabolic process" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 GO:GO:0030163 EMBL:AL844502 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0020011
RefSeq:XP_001351149.1 PDB:2F6I PDBsum:2F6I
ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 172 (65.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 49/148 (33%), Positives = 65/148 (43%)
Query: 87 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXXXXXXX 146
I +YINS G G E AI D+ Y+K I T+ G
Sbjct: 226 IKIYINSPG--------GSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGKKGK 277
Query: 147 XXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 206
P+ IMI QP+G G D+EI KE+ +K L + +T E IE D R
Sbjct: 278 RKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDR 337
Query: 207 PKYFSPSEAVEYGIIDKVLYTEKSPEDH 234
Y + EA +YGIID+V+ T K P +
Sbjct: 338 DYYMNALEAKQYGIIDEVIET-KLPHPY 364
>UNIPROTKB|O97252 [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
GO:GO:0030163 EMBL:AL844502 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001351149.1 PDB:2F6I
PDBsum:2F6I ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 172 (65.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 49/148 (33%), Positives = 65/148 (43%)
Query: 87 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXXXXXXXX 146
I +YINS G G E AI D+ Y+K I T+ G
Sbjct: 226 IKIYINSPG--------GSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGKKGK 277
Query: 147 XXXXPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 206
P+ IMI QP+G G D+EI KE+ +K L + +T E IE D R
Sbjct: 278 RKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDR 337
Query: 207 PKYFSPSEAVEYGIIDKVLYTEKSPEDH 234
Y + EA +YGIID+V+ T K P +
Sbjct: 338 DYYMNALEAKQYGIIDEVIET-KLPHPY 364
>UNIPROTKB|P0C312 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4530 "Oryza sativa" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0006508 GO:GO:0004252
EMBL:AY522331 GO:GO:0009535 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProteinModelPortal:P0C312
Gramene:P0C312 Genevestigator:P0C312 Uniprot:P0C312
Length = 216
Score = 141 (54.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED I+L+INS G G+ AI+D M V P I+T+C+G
Sbjct: 57 EDGISDIFLFINSPG--------GWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILL 108
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRI-EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 199
P + IM+ QP + + + +E+ V+ + ++YA GK
Sbjct: 109 GGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWV 168
Query: 200 IEADIRRPKYFSPSEAVEYGIIDKV 224
+ D+ R + S EA YG++D V
Sbjct: 169 VSEDMERDVFMSADEAKAYGLVDIV 193
>UNIPROTKB|P0C313 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39946 "Oryza sativa Indica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:AY522329 GO:GO:0009535 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProtClustDB:CHL00028
RefSeq:YP_654230.1 ProteinModelPortal:P0C313 GeneID:4126873
Gramene:P0C313 Uniprot:P0C313
Length = 216
Score = 141 (54.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED I+L+INS G G+ AI+D M V P I+T+C+G
Sbjct: 57 EDGISDIFLFINSPG--------GWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILL 108
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRI-EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 199
P + IM+ QP + + + +E+ V+ + ++YA GK
Sbjct: 109 GGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWV 168
Query: 200 IEADIRRPKYFSPSEAVEYGIIDKV 224
+ D+ R + S EA YG++D V
Sbjct: 169 VSEDMERDVFMSADEAKAYGLVDIV 193
>UNIPROTKB|P0C314 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:X15901 EMBL:AY522330 GenomeReviews:AY522330_GR
GO:GO:0009535 eggNOG:COG0740 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 MEROPS:S14.002 ProtClustDB:CHL00028
PIR:JQ0251 RefSeq:NP_039410.1 ProteinModelPortal:P0C314
STRING:P0C314 GeneID:3131474 KEGG:osa:3131474 Gramene:P0C314
Uniprot:P0C314
Length = 216
Score = 141 (54.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED I+L+INS G G+ AI+D M V P I+T+C+G
Sbjct: 57 EDGISDIFLFINSPG--------GWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILL 108
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRI-EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 199
P + IM+ QP + + + +E+ V+ + ++YA GK
Sbjct: 109 GGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWV 168
Query: 200 IEADIRRPKYFSPSEAVEYGIIDKV 224
+ D+ R + S EA YG++D V
Sbjct: 169 VSEDMERDVFMSADEAKAYGLVDIV 193
>UNIPROTKB|Q6ENE9 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4536 "Oryza nivara" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0009570 GO:GO:0006508
GO:GO:0004252 EMBL:AP006728 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_052774.1 ProteinModelPortal:Q6ENE9 MEROPS:S14.002
GeneID:2885922 Gramene:Q6ENE9 ProtClustDB:CHL00028 Uniprot:Q6ENE9
Length = 216
Score = 141 (54.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED I+L+INS G G+ AI+D M V P I+T+C+G
Sbjct: 57 EDGISDIFLFINSPG--------GWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILL 108
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRI-EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 199
P + IM+ QP + + + +E+ V+ + ++YA GK
Sbjct: 109 GGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWV 168
Query: 200 IEADIRRPKYFSPSEAVEYGIIDKV 224
+ D+ R + S EA YG++D V
Sbjct: 169 VSEDMERDVFMSADEAKAYGLVDIV 193
>UNIPROTKB|Q6E6T0 [details] [associations]
symbol:Q6E6T0 "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574
GO:GO:0009536 GO:GO:0006508 GO:GO:0004252 GO:GO:0009535
HOGENOM:HOG000285833 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AY538587 ProteinModelPortal:Q6E6T0 STRING:Q6E6T0
Gramene:Q6E6T0 Uniprot:Q6E6T0
Length = 209
Score = 136 (52.9 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 38/145 (26%), Positives = 61/145 (42%)
Query: 81 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNXXXXXXXXXX 140
ED I+L+INS G G+ AI+D M V P I+ +C+G
Sbjct: 50 EDGISDIFLFINSPG--------GWLISGMAIFDTMQTVTPDIYAICLGIAASMASFILL 101
Query: 141 XXXXXXXXXXPSSTIMIKQPIGRI-EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 199
P + IM+ QP + + + +E+ V+ + ++YA GK
Sbjct: 102 GGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWV 161
Query: 200 IEADIRRPKYFSPSEAVEYGIIDKV 224
+ D+ R + S EA YG++D V
Sbjct: 162 VSEDMERDVFMSADEAKAYGLVDIV 186
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 246 226 0.00078 113 3 11 22 0.43 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 581 (62 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.51u 0.20s 18.71t Elapsed: 00:00:01
Total cpu time: 18.51u 0.20s 18.71t Elapsed: 00:00:01
Start: Sat May 11 08:41:47 2013 End: Sat May 11 08:41:48 2013