BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025917
(246 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P61817|SIRB_BACME Sirohydrochlorin ferrochelatase OS=Bacillus megaterium GN=sirB PE=3
SV=1
Length = 266
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
D V+ V HGSR +E F+ ++ I E +ELA P+I+ F +C++QGA
Sbjct: 13 DAVLYVCHGSRVKEGADQAVAFIERCKKNLDVPIQEVCFLELASPTIEQGFEACIEQGAT 72
Query: 187 RVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLV 234
R+ + P L H DIP + + +P V + P G+ E++V
Sbjct: 73 RIAIVPLLLLTAAHAKHDIPEEIQKVYERYPQVEVLYGEPFGVDERIV 120
>sp|O34632|SIRB_BACSU Sirohydrochlorin ferrochelatase OS=Bacillus subtilis (strain 168)
GN=sirB PE=2 SV=1
Length = 261
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%)
Query: 126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
K ++ V HGSR +++ F+ + + E + +EL EP+I+ F +CV+QGA
Sbjct: 2 KQAILYVGHGSRVKKAQQEAAAFLEGCKAHISVPVQEISFLELQEPTIETGFEACVKQGA 61
Query: 186 NRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLV 234
+ V P L H DIP A +P V P+G+ E++V
Sbjct: 62 THIAVVPLLLLTAAHAKHDIPEEIVRVASRYPSVRISYGKPIGIDEEVV 110
>sp|O87690|CBIX_BACME Sirohydrochlorin cobaltochelatase OS=Bacillus megaterium GN=cbiX
PE=1 SV=1
Length = 306
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 129 VIIVDHGSRRRESNLMLKQFVAMFREK-TGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
V+ V HGSR E N ++F++ + ++VE +E P++ +CV +GA
Sbjct: 9 VLFVGHGSRDPEGND--REFISTMKHDWDASILVETCFLEFERPNVSQGIDTCVAKGAQD 66
Query: 188 VIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQ 232
V+V P L P H IP+ EA +++P V ++ P+G+HE+
Sbjct: 67 VVVIPIMLLPAGHSKIHIPAAIDEAKEKYPHVNFVYGRPIGVHEE 111
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 93 PIWVHPNSLNFQRGPSRTKHLSIKSSSRDGVGDKDGVIIVDHGSRRRESNLMLKQFVAMF 152
PI VH +L + + ++++ + D VI++ G ++N L + +
Sbjct: 105 PIGVHEEALEILKTRLQESGENLETPAED-----TAVIVLGRGGSDPDANSDLYKITRLL 159
Query: 153 REKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVIVSPFFLFPGRHWCQDIPSLTAEA 212
EKT Y IVE + M + P I + C++ GA +V++ P+FLF G + + + +
Sbjct: 160 WEKTNYKIVETSFMGVTAPLIDEGVERCLKLGAKKVVILPYFLFTGV-LIKRLEEMVKQY 218
Query: 213 AKEHPGVPYIVTAPLGLHEQL 233
+H + + + G H +L
Sbjct: 219 KMQHENIEFKLAGYFGFHPKL 239
>sp|Q58380|CBIX_METJA Sirohydrochlorin cobaltochelatase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=cbiX PE=3 SV=1
Length = 143
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ +++V HGSR S +L + +E+ + IVE ME +EP+I A ++QGA
Sbjct: 2 EALVLVGHGSRLPYSKELLVKLAEKVKERNLFPIVEIGLMEFSEPTIPQAVKKAIEQGAK 61
Query: 187 RVIVSPFFLFPGRHWCQDIPSL 208
R+IV P FL G H +DIP L
Sbjct: 62 RIIVVPVFLAHGIHTTRDIPRL 83
>sp|P61819|CBIX_METMP Sirohydrochlorin cobaltochelatase OS=Methanococcus maripaludis
(strain S2 / LL) GN=cbiX PE=3 SV=1
Length = 144
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ +++V HGSR S ++ + + + Y IVE ME EP+I + GA
Sbjct: 2 EALVLVGHGSRLPHSKNVVMEVAEKIKARNIYDIVEVGMMEFNEPTIPQTIKKVIDAGAK 61
Query: 187 RVIVSPFFLFPGRHWCQDIPSL 208
+VIV+P FL PG H +DIP +
Sbjct: 62 KVIVTPVFLAPGNHTERDIPKI 83
>sp|A6UWT5|CBIX_META3 Sirohydrochlorin cobaltochelatase OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=cbiX PE=3 SV=1
Length = 143
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ ++++ HGSR S ++ + +EK Y IVE ME EP+I + +GA
Sbjct: 2 EALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGAK 61
Query: 187 RVIVSPFFLFPGRHWCQDIPSL 208
++I+ P FL G H +DIP +
Sbjct: 62 KIIIVPVFLAHGNHTKRDIPQI 83
>sp|Q8TY77|CBIX_METKA Sirohydrochlorin cobaltochelatase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=cbiX PE=3
SV=1
Length = 143
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
V++V HGSR S ++++ E + VE MEL EP++++A + G ++
Sbjct: 3 AVVLVGHGSRLPYSRQVVEKIAEYVEEMGDFETVEVGFMELCEPTVQEAVKKAAESGVDK 62
Query: 188 VIVSPFFLFPGRHWCQDIPSL 208
++V P FL G H +DIP +
Sbjct: 63 IVVVPVFLAHGVHTKRDIPKM 83
>sp|Q975N6|CBIX_SULTO Sirohydrochlorin cobaltochelatase OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=cbiX PE=3
SV=1
Length = 120
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
GV++V HGS+ +E + Q+ + R+ + +VE +E +PSI +A G +
Sbjct: 3 GVLLVLHGSKIKEWQDVAIQYANLLRKY--FDLVEYGFIEFNQPSITEAAKKLASNGVDT 60
Query: 188 VIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQL 233
+IV P G H+ +DIP + +E GV ++ P+G+ E++
Sbjct: 61 IIVVPLLFAAGTHFKRDIP----KQLEEIKGVKIMIAEPIGVDERI 102
>sp|Q4JAI2|CBIX_SULAC Sirohydrochlorin cobaltochelatase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=cbiX PE=3 SV=1
Length = 123
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
G+++V HGS+ +E ++ + K + +VE +E+ EP I +A V++GA+
Sbjct: 3 GLLLVLHGSKIKEWQEIVINYAEEL--KRHFPLVEYGFIEINEPKIDEAAKKLVERGADT 60
Query: 188 VIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLV 234
++V P G H+ +DIP+ E + + I+ P+G +++V
Sbjct: 61 IVVVPLLFAAGMHFKRDIPNQLKETSNK---AKIIIAEPIGFDKRIV 104
>sp|C3NGG2|CBIX_SULIN Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=cbiX PE=3 SV=1
Length = 128
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQL 233
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKI 112
>sp|C3MWZ3|CBIX_SULIM Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQL 233
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKI 112
>sp|C3MR05|CBIX_SULIL Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQL 233
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKI 112
>sp|C4KID1|CBIX_SULIK Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=cbiX PE=3 SV=1
Length = 128
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQL 233
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKI 112
>sp|C3MZ53|CBIX_SULIA Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.16.27) GN=cbiX PE=3 SV=1
Length = 128
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQL 233
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKI 112
>sp|C3N773|CBIX_SULIY Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQL 233
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKI 112
>sp|Q55451|CBIX_SYNY3 Sirohydrochlorin cobaltochelatase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cbiX PE=1 SV=1
Length = 336
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
++++ HG+R + FVA ++ V P +EL EP+I+ CV QG +
Sbjct: 27 LLMIGHGTRDEDGRQTFLDFVAQYQALDHSRPVIPCFLELTEPNIQAGVQQCVDQGFEEI 86
Query: 189 IVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGL 229
P LF RH D+ + + + HP + + G+
Sbjct: 87 SALPILLFAARHNKFDVTNELDRSRQAHPQINFFYGRHFGI 127
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 108 SRTKHLSIKSSSRDGVGDKDGVII-VDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHM 166
+R L ++ G+ +D V++ V GS ++N + + M E +GY VE +
Sbjct: 137 ARLNQLDSPEANPQGIDRQDTVLLFVGRGSSDPDANGDVYKMARMLWEGSGYQTVETCFI 196
Query: 167 ELAEPSIKDAFGSCVQQGANRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAP 226
++ P +++ F R+IV P+FLF G + I ++T E P + +
Sbjct: 197 GISHPRLEEGFRRARLYQPKRIIVLPYFLFMG-ALVKKIFTITEEQRATFPEIEIQSLSE 255
Query: 227 LGLHEQLV 234
+G+ +L+
Sbjct: 256 MGIQPELL 263
>sp|Q12X56|CBIX_METBU Sirohydrochlorin cobaltochelatase OS=Methanococcoides burtonii
(strain DSM 6242) GN=cbiX PE=3 SV=1
Length = 131
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGSR + ++ + A +K +++ ME P++ +A G
Sbjct: 3 EKIGILAIGHGSRLPYNKEVVSEIAATIAKKHPDYVIKAGFMENTLPTVMEALADFDGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPG--------VPYIVTAPLGLHEQL 233
++I P FL G H +DIP + + + G +P PLG HE L
Sbjct: 63 VTKIIAVPVFLASGVHITEDIPEILKLDPETNEGKITVDGNEIPVTFGKPLGHHELL 119
>sp|Q8TJZ5|CBIX_METAC Sirohydrochlorin cobaltochelatase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=cbiX
PE=3 SV=1
Length = 130
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q +K ++V ME +EP++++A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVSQIADYIAQKHSDVVVRAGFMENSEPTLEEAIAGFAGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTAEAAK-------EHPGVPYIVTAPLGLHE 231
++ P FL G H +DIP + + K + VP PLG E
Sbjct: 63 VTKIAAVPVFLASGVHITKDIPGILSLDEKGCGILNIDGKDVPLCYAKPLGADE 116
>sp|O27448|CBIX_METTH Sirohydrochlorin cobaltochelatase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=cbiX PE=1 SV=2
Length = 143
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
K GV++V HGSR ++ ++R++ + V M ++ PSI +A G
Sbjct: 10 KIGVLLVGHGSRLPYGEEVINGIADIYRQEADHP-VAVGFMNMSRPSIPEAINELAAMGV 68
Query: 186 NRVIVSPFFLFPGRHWCQDIPSL 208
++IV+P FL G H DIP +
Sbjct: 69 EKIIVTPVFLAHGVHTKHDIPHI 91
>sp|Q980A7|CBIX_SULSO Sirohydrochlorin cobaltochelatase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=cbiX
PE=3 SV=1
Length = 128
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSKY-----FSLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQL 233
A++++V P G H+ +DIP L E + G + + PLG E++
Sbjct: 58 ADKIVVVPLLFATGTHFRRDIPRLLGIDNDEKKIRYMGREIEITIADPLGFDEKI 112
>sp|Q8PZH6|CBIX_METMA Sirohydrochlorin cobaltochelatase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=cbiX PE=3 SV=1
Length = 130
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q +K ++V ME +EP++++A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVTQIANYIAQKHSDVVVRAGFMENSEPTLEEAIEGFSGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPG--------VPYIVTAPLGLHE 231
++ P FL G H +DIP + + KE G VP PLG E
Sbjct: 63 VTKISAVPVFLASGVHITKDIPEILS-LDKEGCGILEIDGKEVPLCYAKPLGADE 116
>sp|P61816|CBIX_METBF Sirohydrochlorin cobaltochelatase OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=cbiX PE=1 SV=1
Length = 130
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q K ++V ME +EP++ +A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVTQIADYIARKHSDVVVRAGFMENSEPTLGEAIEGFSGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSL 208
++ P FL G H +DIP +
Sbjct: 63 VTKIAAVPVFLASGVHITKDIPRI 86
>sp|Q6MHT3|HEMH_BDEBA Ferrochelatase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 /
DSM 50701 / NCIB 9529 / HD100) GN=hemH PE=3 SV=1
Length = 335
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 146 KQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVIVSPFF 194
++F A+ +E+ V ++ +EPS++ A Q G + ++V+P F
Sbjct: 79 RRFAALLQEELKDQFVVKVGLQYSEPSVESALKDLQQAGVDEILVAPMF 127
>sp|B3PLQ1|GLMM_CELJU Phosphoglucosamine mutase OS=Cellvibrio japonicus (strain Ueda107)
GN=glmM PE=3 SV=1
Length = 445
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 92 NPIWVHPNSLNFQRGPSRTKHLSIKSSSRD-----GV---GDKDGVIIVDHGSRRRESNL 143
PI+V PN N RG TK +++ + G+ GD D V+ VDH + +
Sbjct: 201 TPIFVDPNGTNINRGCGSTKPEALQEKVVELGADLGIAFDGDGDRVVFVDHKGELVDGDE 260
Query: 144 MLKQFVAMFREKTG 157
+L A +E G
Sbjct: 261 LLYIIAAYQQEYAG 274
>sp|Q0CU99|TOF1_ASPTN Topoisomerase 1-associated factor 1 OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=tof1 PE=3 SV=1
Length = 1147
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 146 KQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVI 189
KQ +++ R L+V P E E IK G+ V+ G NR++
Sbjct: 733 KQTISVTRRPPAELVVNPNDAETTEDKIKIVIGALVKDGKNRLV 776
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,406,647
Number of Sequences: 539616
Number of extensions: 3623410
Number of successful extensions: 8452
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8421
Number of HSP's gapped (non-prelim): 31
length of query: 246
length of database: 191,569,459
effective HSP length: 114
effective length of query: 132
effective length of database: 130,053,235
effective search space: 17167027020
effective search space used: 17167027020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)