Query 025920
Match_columns 246
No_of_seqs 277 out of 2045
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 11:03:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025920.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025920hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 7.1E-53 1.5E-57 375.4 15.1 185 52-245 42-226 (492)
2 PF05577 Peptidase_S28: Serine 100.0 2.7E-42 5.9E-47 320.7 16.0 166 62-243 1-167 (434)
3 KOG2182 Hydrolytic enzymes of 100.0 4.7E-37 1E-41 280.3 16.0 176 52-243 48-226 (514)
4 PF05576 Peptidase_S37: PS-10 99.8 1.6E-18 3.4E-23 156.4 10.8 155 55-237 31-186 (448)
5 PLN02385 hydrolase; alpha/beta 99.7 3.8E-16 8.3E-21 141.2 15.7 110 96-220 86-196 (349)
6 KOG1455 Lysophospholipase [Lip 99.7 3.8E-15 8.1E-20 130.0 15.5 118 95-228 52-170 (313)
7 PLN02298 hydrolase, alpha/beta 99.7 2.9E-15 6.3E-20 134.1 15.1 111 97-221 59-169 (330)
8 PHA02857 monoglyceride lipase; 99.6 2.8E-15 6.1E-20 130.4 13.4 110 96-222 24-133 (276)
9 PRK00870 haloalkane dehalogena 99.6 6E-15 1.3E-19 130.4 13.6 104 97-220 46-149 (302)
10 PLN02824 hydrolase, alpha/beta 99.6 5.3E-15 1.1E-19 130.0 12.1 109 97-221 29-137 (294)
11 PLN02965 Probable pheophorbida 99.6 8.1E-15 1.7E-19 126.5 11.8 104 97-220 3-106 (255)
12 PRK10749 lysophospholipase L2; 99.6 1.5E-14 3.2E-19 130.1 13.4 112 96-220 53-165 (330)
13 TIGR02240 PHA_depoly_arom poly 99.6 5.1E-15 1.1E-19 129.1 9.1 102 97-221 25-126 (276)
14 TIGR01250 pro_imino_pep_2 prol 99.6 1.8E-14 3.9E-19 123.4 12.0 105 97-219 25-129 (288)
15 COG2267 PldB Lysophospholipase 99.6 1.4E-14 3E-19 128.9 11.2 110 97-224 34-144 (298)
16 PF12697 Abhydrolase_6: Alpha/ 99.6 2.4E-14 5.1E-19 117.6 10.8 102 100-222 1-102 (228)
17 PRK03592 haloalkane dehalogena 99.6 2.1E-14 4.5E-19 126.3 11.1 102 97-221 27-128 (295)
18 PRK10673 acyl-CoA esterase; Pr 99.6 3.1E-14 6.8E-19 121.7 11.0 99 96-218 15-113 (255)
19 TIGR01607 PST-A Plasmodium sub 99.5 4.7E-14 1E-18 127.2 12.0 118 95-221 19-185 (332)
20 TIGR03343 biphenyl_bphD 2-hydr 99.5 3.3E-14 7.1E-19 123.5 9.7 106 97-220 30-135 (282)
21 PLN02211 methyl indole-3-aceta 99.5 1.3E-13 2.8E-18 121.0 12.1 104 97-220 18-121 (273)
22 TIGR03101 hydr2_PEP hydrolase, 99.5 2.1E-13 4.6E-18 119.4 13.2 110 97-221 25-134 (266)
23 TIGR03056 bchO_mg_che_rel puta 99.5 1E-13 2.2E-18 119.3 10.9 103 97-221 28-130 (278)
24 KOG4178 Soluble epoxide hydrol 99.5 6.2E-14 1.4E-18 123.8 9.3 106 97-222 44-149 (322)
25 PLN02578 hydrolase 99.5 1.9E-13 4.2E-18 124.0 12.6 100 97-219 86-185 (354)
26 TIGR03611 RutD pyrimidine util 99.5 7.3E-14 1.6E-18 118.0 8.9 101 97-219 13-113 (257)
27 PRK11126 2-succinyl-6-hydroxy- 99.5 1.1E-13 2.4E-18 117.5 10.1 98 98-220 3-101 (242)
28 PRK06489 hypothetical protein; 99.5 5E-13 1.1E-17 121.5 14.9 112 97-219 69-187 (360)
29 TIGR01249 pro_imino_pep_1 prol 99.5 1.1E-13 2.4E-18 122.9 10.4 104 97-221 27-130 (306)
30 PLN03087 BODYGUARD 1 domain co 99.5 2.2E-13 4.8E-18 128.1 11.6 108 97-222 201-310 (481)
31 PLN02679 hydrolase, alpha/beta 99.5 2E-13 4.3E-18 124.3 10.8 102 97-220 88-190 (360)
32 KOG4409 Predicted hydrolase/ac 99.5 1.8E-13 3.9E-18 121.6 9.0 106 96-220 89-194 (365)
33 TIGR03695 menH_SHCHC 2-succiny 99.5 3.4E-13 7.4E-18 112.3 10.3 102 98-220 2-104 (251)
34 PLN02511 hydrolase 99.5 5.2E-13 1.1E-17 122.9 12.2 109 97-222 100-211 (388)
35 PLN02894 hydrolase, alpha/beta 99.5 8.2E-13 1.8E-17 122.1 13.4 108 96-221 104-211 (402)
36 PLN02652 hydrolase; alpha/beta 99.5 5.5E-13 1.2E-17 123.0 12.0 107 96-221 135-245 (395)
37 PRK10349 carboxylesterase BioH 99.5 2E-13 4.4E-18 117.4 8.4 93 99-219 15-107 (256)
38 PRK03204 haloalkane dehalogena 99.4 4.2E-13 9.1E-18 118.2 10.2 103 97-221 34-136 (286)
39 TIGR02427 protocat_pcaD 3-oxoa 99.4 2.2E-13 4.8E-18 113.8 8.0 101 98-221 14-114 (251)
40 PLN03084 alpha/beta hydrolase 99.4 5.5E-13 1.2E-17 122.5 11.2 107 97-222 127-233 (383)
41 PRK08775 homoserine O-acetyltr 99.4 4.1E-13 8.9E-18 121.2 9.5 105 97-220 57-172 (343)
42 TIGR01738 bioH putative pimelo 99.4 1.1E-12 2.5E-17 109.3 10.0 94 98-219 5-98 (245)
43 TIGR01840 esterase_phb esteras 99.4 2.2E-12 4.7E-17 108.9 10.6 119 97-222 13-131 (212)
44 PRK10985 putative hydrolase; P 99.4 4.6E-12 1E-16 113.6 12.0 110 97-222 58-169 (324)
45 KOG2564 Predicted acetyltransf 99.3 6.3E-12 1.4E-16 108.7 10.6 129 59-216 46-177 (343)
46 TIGR03100 hydr1_PEP hydrolase, 99.3 2.9E-11 6.3E-16 106.1 14.4 109 97-222 26-135 (274)
47 PRK14875 acetoin dehydrogenase 99.3 1.1E-11 2.3E-16 112.0 11.2 102 96-220 130-231 (371)
48 PRK07581 hypothetical protein; 99.3 3.3E-12 7.3E-17 114.8 7.4 87 127-219 70-157 (339)
49 PRK10566 esterase; Provisional 99.3 2.9E-11 6.3E-16 103.5 12.4 109 97-216 27-137 (249)
50 TIGR01392 homoserO_Ac_trn homo 99.3 8.9E-12 1.9E-16 112.8 7.5 119 97-221 31-162 (351)
51 PF00561 Abhydrolase_1: alpha/ 99.3 1.4E-11 3E-16 102.6 8.0 78 129-220 1-78 (230)
52 KOG1454 Predicted hydrolase/ac 99.3 3.8E-11 8.3E-16 108.1 10.5 111 96-225 57-170 (326)
53 PLN02980 2-oxoglutarate decarb 99.2 4.3E-11 9.3E-16 127.1 12.5 108 97-219 1371-1478(1655)
54 PRK05855 short chain dehydroge 99.2 3E-11 6.5E-16 115.2 9.2 104 97-220 25-130 (582)
55 PRK05077 frsA fermentation/res 99.2 1E-10 2.2E-15 108.6 12.2 108 97-222 193-301 (414)
56 COG1647 Esterase/lipase [Gener 99.2 1.2E-10 2.6E-15 97.9 10.7 109 97-226 15-123 (243)
57 TIGR01836 PHA_synth_III_C poly 99.2 3.3E-10 7.1E-15 102.7 11.9 109 97-223 62-173 (350)
58 TIGR03230 lipo_lipase lipoprot 99.2 6.3E-10 1.4E-14 103.5 14.0 110 97-219 41-152 (442)
59 PF12695 Abhydrolase_5: Alpha/ 99.2 3.1E-10 6.8E-15 88.6 10.2 93 99-219 1-93 (145)
60 PRK00175 metX homoserine O-ace 99.1 2.5E-10 5.5E-15 104.6 10.1 119 97-221 48-182 (379)
61 PRK13604 luxD acyl transferase 99.1 3.1E-10 6.7E-15 100.9 10.2 103 97-220 37-140 (307)
62 cd00707 Pancreat_lipase_like P 99.1 4.9E-10 1.1E-14 98.7 11.1 109 97-219 36-145 (275)
63 KOG1552 Predicted alpha/beta h 99.1 3.1E-10 6.6E-15 97.5 8.7 101 98-219 61-161 (258)
64 KOG2382 Predicted alpha/beta h 99.1 7.9E-10 1.7E-14 97.9 11.4 108 96-221 51-160 (315)
65 COG0596 MhpC Predicted hydrola 99.0 1.4E-09 3.1E-14 89.5 8.5 102 98-222 22-124 (282)
66 TIGR00976 /NonD putative hydro 99.0 2E-09 4.3E-14 103.4 10.4 85 123-221 48-132 (550)
67 TIGR02821 fghA_ester_D S-formy 99.0 2.7E-08 5.9E-13 87.3 16.2 119 98-220 43-172 (275)
68 PLN02872 triacylglycerol lipas 99.0 1E-09 2.2E-14 101.4 7.0 116 97-219 74-195 (395)
69 PRK11071 esterase YqiA; Provis 98.9 3E-09 6.5E-14 88.6 8.4 91 98-222 2-94 (190)
70 TIGR03502 lipase_Pla1_cef extr 98.9 6.6E-09 1.4E-13 102.4 10.9 105 99-208 451-577 (792)
71 KOG4391 Predicted alpha/beta h 98.9 1.3E-09 2.8E-14 91.5 4.5 105 96-218 77-181 (300)
72 PF07819 PGAP1: PGAP1-like pro 98.9 2.8E-08 6.1E-13 85.1 11.8 133 96-243 3-147 (225)
73 PLN00021 chlorophyllase 98.8 3.5E-08 7.6E-13 88.5 11.9 100 97-219 52-164 (313)
74 PRK11460 putative hydrolase; P 98.8 6.7E-08 1.5E-12 82.9 12.6 118 97-220 16-137 (232)
75 PF10503 Esterase_phd: Esteras 98.8 3.1E-08 6.6E-13 84.5 10.0 115 98-220 17-131 (220)
76 COG0429 Predicted hydrolase of 98.8 3.7E-08 8.1E-13 87.5 10.6 109 98-222 76-186 (345)
77 PLN02442 S-formylglutathione h 98.8 8.8E-08 1.9E-12 84.5 11.9 121 98-221 48-178 (283)
78 PF12146 Hydrolase_4: Putative 98.7 2E-08 4.3E-13 72.0 5.4 71 86-175 7-79 (79)
79 TIGR01838 PHA_synth_I poly(R)- 98.7 1.1E-07 2.5E-12 90.7 11.9 108 97-222 188-303 (532)
80 KOG1838 Alpha/beta hydrolase [ 98.7 1.2E-07 2.6E-12 86.8 11.4 110 98-223 126-237 (409)
81 PRK10162 acetyl esterase; Prov 98.7 1.9E-07 4.2E-12 83.7 12.7 105 98-221 82-195 (318)
82 PF00326 Peptidase_S9: Prolyl 98.7 2.8E-08 6.2E-13 83.4 6.8 94 121-222 7-100 (213)
83 PF07859 Abhydrolase_3: alpha/ 98.7 9.1E-08 2E-12 79.9 8.6 103 100-221 1-110 (211)
84 COG1506 DAP2 Dipeptidyl aminop 98.6 6.1E-08 1.3E-12 94.5 6.4 112 99-224 396-510 (620)
85 PRK07868 acyl-CoA synthetase; 98.6 5.3E-07 1.2E-11 92.3 12.7 110 96-222 66-178 (994)
86 PF00975 Thioesterase: Thioest 98.6 3.4E-07 7.4E-12 77.2 9.2 101 98-221 1-104 (229)
87 PF06342 DUF1057: Alpha/beta h 98.6 2.4E-06 5.3E-11 74.7 14.5 104 97-222 35-138 (297)
88 PF10230 DUF2305: Uncharacteri 98.6 1E-06 2.2E-11 77.3 12.2 119 99-226 4-127 (266)
89 COG3509 LpqC Poly(3-hydroxybut 98.5 5.4E-06 1.2E-10 72.8 13.9 116 98-219 62-177 (312)
90 PRK06765 homoserine O-acetyltr 98.5 3.4E-07 7.5E-12 84.5 6.9 86 128-219 99-194 (389)
91 KOG2984 Predicted hydrolase [G 98.4 1.8E-07 3.9E-12 78.0 3.6 106 98-220 43-148 (277)
92 PF05677 DUF818: Chlamydia CHL 98.4 2E-06 4.2E-11 77.0 10.3 98 96-208 136-237 (365)
93 PF06500 DUF1100: Alpha/beta h 98.4 7.7E-07 1.7E-11 81.9 7.0 111 97-224 189-299 (411)
94 PF02129 Peptidase_S15: X-Pro 98.3 1.7E-06 3.7E-11 75.7 8.0 88 124-225 53-140 (272)
95 PLN02733 phosphatidylcholine-s 98.3 2.2E-06 4.8E-11 80.2 9.2 86 122-224 115-204 (440)
96 COG4757 Predicted alpha/beta h 98.3 3.1E-06 6.8E-11 72.0 7.8 90 101-203 33-122 (281)
97 PF01674 Lipase_2: Lipase (cla 98.2 3E-06 6.4E-11 72.3 7.1 92 98-207 2-96 (219)
98 PRK10115 protease 2; Provision 98.2 8.7E-06 1.9E-10 80.4 11.2 114 98-221 445-559 (686)
99 KOG2281 Dipeptidyl aminopeptid 98.2 2.9E-06 6.4E-11 80.9 7.3 116 96-221 640-761 (867)
100 COG0657 Aes Esterase/lipase [L 98.2 1.3E-05 2.9E-10 71.3 10.8 105 97-220 79-190 (312)
101 COG2021 MET2 Homoserine acetyl 98.2 5.6E-06 1.2E-10 74.8 8.1 112 97-220 51-181 (368)
102 PF00756 Esterase: Putative es 98.2 2.2E-05 4.7E-10 67.3 10.7 49 172-220 101-149 (251)
103 KOG4667 Predicted esterase [Li 98.1 1.3E-05 2.7E-10 67.7 8.4 108 96-221 32-139 (269)
104 KOG1553 Predicted alpha/beta h 98.1 2.1E-05 4.6E-10 70.5 9.8 77 126-218 266-342 (517)
105 PTZ00472 serine carboxypeptida 98.1 2.4E-05 5.1E-10 73.9 10.7 84 128-221 121-216 (462)
106 PF01738 DLH: Dienelactone hyd 98.0 8.6E-06 1.9E-10 68.6 6.0 113 97-219 14-130 (218)
107 PF08538 DUF1749: Protein of u 98.0 8.7E-05 1.9E-09 65.9 12.0 114 98-227 33-153 (303)
108 PF06821 Ser_hydrolase: Serine 98.0 4.7E-05 1E-09 62.4 9.6 52 171-222 40-92 (171)
109 PF09752 DUF2048: Uncharacteri 98.0 6.7E-05 1.4E-09 67.7 11.1 149 52-212 50-201 (348)
110 PRK10252 entF enterobactin syn 98.0 3.1E-05 6.8E-10 81.0 10.5 99 97-219 1068-1169(1296)
111 COG4099 Predicted peptidase [G 98.0 4.3E-05 9.3E-10 67.3 8.6 45 175-219 258-302 (387)
112 COG3208 GrsT Predicted thioest 97.9 1.8E-05 4E-10 67.8 6.1 100 97-220 7-113 (244)
113 PF06028 DUF915: Alpha/beta hy 97.9 7.9E-05 1.7E-09 65.0 10.1 121 96-226 10-148 (255)
114 PF05448 AXE1: Acetyl xylan es 97.9 5.3E-05 1.1E-09 68.3 8.8 117 99-221 85-209 (320)
115 KOG2565 Predicted hydrolases o 97.9 1.2E-05 2.7E-10 72.5 4.3 107 97-220 152-263 (469)
116 KOG2100 Dipeptidyl aminopeptid 97.9 5.4E-05 1.2E-09 75.4 9.2 119 97-224 525-646 (755)
117 COG0400 Predicted esterase [Ge 97.9 4.7E-05 1E-09 64.4 7.5 54 166-219 79-132 (207)
118 PRK05371 x-prolyl-dipeptidyl a 97.9 9.5E-05 2.1E-09 73.9 10.8 88 120-220 271-372 (767)
119 COG0412 Dienelactone hydrolase 97.9 0.00023 4.9E-09 61.4 11.7 113 98-216 28-141 (236)
120 COG3319 Thioesterase domains o 97.8 3.8E-05 8.2E-10 67.0 6.1 101 98-222 1-104 (257)
121 TIGR01839 PHA_synth_II poly(R) 97.8 0.00015 3.4E-09 69.3 10.3 109 97-223 215-330 (560)
122 COG2945 Predicted hydrolase of 97.8 0.00024 5.2E-09 59.0 9.8 86 120-222 52-138 (210)
123 PF02230 Abhydrolase_2: Phosph 97.7 0.00024 5.1E-09 60.0 9.6 57 165-222 85-141 (216)
124 PF12715 Abhydrolase_7: Abhydr 97.7 5.5E-05 1.2E-09 69.0 5.9 99 120-220 152-259 (390)
125 cd00312 Esterase_lipase Estera 97.7 0.00015 3.3E-09 68.5 8.6 110 97-222 94-214 (493)
126 KOG1515 Arylacetamide deacetyl 97.7 0.00086 1.9E-08 60.7 12.8 108 98-224 91-210 (336)
127 PF12740 Chlorophyllase2: Chlo 97.6 0.00046 1E-08 60.1 10.2 101 97-219 16-129 (259)
128 PF00151 Lipase: Lipase; Inte 97.6 0.00013 2.9E-09 65.9 6.9 110 97-219 71-185 (331)
129 KOG2931 Differentiation-relate 97.6 0.001 2.2E-08 58.7 11.8 108 99-222 48-158 (326)
130 PF05057 DUF676: Putative seri 97.6 0.00033 7.3E-09 59.5 8.2 42 185-226 77-130 (217)
131 PRK10439 enterobactin/ferric e 97.6 0.0012 2.6E-08 61.5 12.4 51 172-222 272-324 (411)
132 PF00450 Peptidase_S10: Serine 97.5 0.00051 1.1E-08 63.1 9.3 113 97-222 39-182 (415)
133 PF05728 UPF0227: Uncharacteri 97.5 0.00048 1E-08 57.4 8.1 88 100-221 2-91 (187)
134 PF03403 PAF-AH_p_II: Platelet 97.5 0.0007 1.5E-08 62.4 9.6 35 187-222 229-263 (379)
135 PLN02209 serine carboxypeptida 97.4 0.0053 1.2E-07 57.6 15.0 84 128-221 117-212 (437)
136 PLN03016 sinapoylglucose-malat 97.4 0.0038 8.3E-08 58.5 13.9 84 128-221 115-210 (433)
137 COG2819 Predicted hydrolase of 97.4 0.0032 6.9E-08 54.9 12.2 50 177-226 128-177 (264)
138 PF03096 Ndr: Ndr family; Int 97.4 0.00078 1.7E-08 59.4 8.4 107 98-220 24-133 (283)
139 PRK04940 hypothetical protein; 97.4 0.0012 2.7E-08 54.5 9.0 56 165-225 41-96 (180)
140 PF06057 VirJ: Bacterial virul 97.4 0.0022 4.8E-08 53.3 10.1 82 119-219 20-105 (192)
141 KOG4627 Kynurenine formamidase 97.3 0.00095 2.1E-08 56.2 7.4 102 97-220 67-171 (270)
142 COG1075 LipA Predicted acetylt 97.2 0.0011 2.3E-08 60.1 7.5 102 97-222 59-165 (336)
143 PF05990 DUF900: Alpha/beta hy 97.2 0.0018 3.9E-08 55.7 8.3 94 97-206 18-113 (233)
144 PF02450 LCAT: Lecithin:choles 97.2 0.00096 2.1E-08 61.7 6.5 57 165-224 101-163 (389)
145 cd00741 Lipase Lipase. Lipase 97.1 0.0019 4.2E-08 51.4 7.3 56 167-224 11-70 (153)
146 KOG3724 Negative regulator of 97.1 0.0034 7.3E-08 61.8 9.3 55 187-241 183-242 (973)
147 smart00824 PKS_TE Thioesterase 96.9 0.0082 1.8E-07 48.7 9.6 73 128-219 25-100 (212)
148 PF00135 COesterase: Carboxyle 96.9 0.013 2.7E-07 55.5 12.1 114 97-223 124-247 (535)
149 PF08840 BAAT_C: BAAT / Acyl-C 96.9 0.0024 5.2E-08 54.1 6.2 55 170-225 6-60 (213)
150 PF07224 Chlorophyllase: Chlor 96.9 0.0037 8E-08 54.5 7.2 90 97-208 45-142 (307)
151 COG0627 Predicted esterase [Ge 96.9 0.007 1.5E-07 54.5 9.2 123 97-224 53-190 (316)
152 COG4814 Uncharacterized protei 96.9 0.006 1.3E-07 52.9 8.3 118 97-222 45-177 (288)
153 COG3458 Acetyl esterase (deace 96.8 0.0045 9.9E-08 54.1 7.5 116 97-218 83-207 (321)
154 COG3571 Predicted hydrolase of 96.8 0.014 3E-07 47.5 9.6 109 97-224 14-127 (213)
155 KOG2624 Triglyceride lipase-ch 96.8 0.0036 7.7E-08 58.1 7.0 120 96-221 72-199 (403)
156 KOG3101 Esterase D [General fu 96.8 0.0013 2.8E-08 55.6 3.7 126 97-226 43-180 (283)
157 PF01764 Lipase_3: Lipase (cla 96.8 0.0029 6.4E-08 49.1 5.5 52 169-222 49-106 (140)
158 PF06259 Abhydrolase_8: Alpha/ 96.8 0.0052 1.1E-07 50.7 7.1 58 163-221 87-144 (177)
159 cd00519 Lipase_3 Lipase (class 96.8 0.0045 9.8E-08 52.6 6.9 55 165-222 109-168 (229)
160 COG4188 Predicted dienelactone 96.7 0.0079 1.7E-07 54.7 8.0 100 97-208 70-181 (365)
161 COG1770 PtrB Protease II [Amin 96.5 0.02 4.4E-07 55.6 10.0 153 53-221 397-562 (682)
162 COG2939 Carboxypeptidase C (ca 96.5 0.011 2.3E-07 55.8 7.7 115 97-225 100-240 (498)
163 COG3545 Predicted esterase of 96.3 0.011 2.3E-07 48.6 6.1 56 162-224 42-97 (181)
164 COG2272 PnbA Carboxylesterase 96.3 0.0092 2E-07 56.1 6.5 90 121-222 118-218 (491)
165 PF11144 DUF2920: Protein of u 96.3 0.014 3E-07 53.9 7.2 54 168-221 164-219 (403)
166 PF12048 DUF3530: Protein of u 96.2 0.19 4.1E-06 45.1 14.3 136 79-221 72-229 (310)
167 PLN02454 triacylglycerol lipas 96.1 0.04 8.6E-07 51.2 9.2 42 165-206 207-248 (414)
168 COG2936 Predicted acyl esteras 96.1 0.014 3.1E-07 56.0 6.4 84 125-222 77-160 (563)
169 KOG1282 Serine carboxypeptidas 96.0 0.56 1.2E-05 44.3 16.8 113 97-222 72-214 (454)
170 PF11187 DUF2974: Protein of u 96.0 0.017 3.8E-07 49.4 6.3 53 169-224 70-126 (224)
171 PF03583 LIP: Secretory lipase 96.0 0.049 1.1E-06 48.3 9.4 83 124-220 22-112 (290)
172 PLN02606 palmitoyl-protein thi 96.0 0.2 4.4E-06 44.7 13.0 109 98-228 27-139 (306)
173 KOG2369 Lecithin:cholesterol a 96.0 0.0065 1.4E-07 56.8 3.4 59 164-224 162-228 (473)
174 KOG3847 Phospholipase A2 (plat 95.9 0.033 7.2E-07 49.8 7.4 39 185-224 240-278 (399)
175 PF10340 DUF2424: Protein of u 95.8 0.084 1.8E-06 48.5 9.9 52 166-219 177-233 (374)
176 PLN02310 triacylglycerol lipas 95.8 0.025 5.4E-07 52.4 6.5 57 164-222 189-249 (405)
177 TIGR01849 PHB_depoly_PhaZ poly 95.8 0.085 1.8E-06 49.1 10.1 105 98-225 103-212 (406)
178 COG3150 Predicted esterase [Ge 95.6 0.039 8.4E-07 45.1 6.2 93 100-224 2-94 (191)
179 KOG4840 Predicted hydrolases o 95.6 0.025 5.5E-07 48.3 5.2 108 99-224 37-146 (299)
180 PLN02213 sinapoylglucose-malat 95.5 0.051 1.1E-06 48.9 7.5 83 129-221 2-96 (319)
181 PLN02162 triacylglycerol lipas 95.5 0.046 1E-06 51.4 7.1 39 184-222 276-322 (475)
182 PLN02571 triacylglycerol lipas 95.4 0.069 1.5E-06 49.6 8.1 39 164-206 208-246 (413)
183 PLN02517 phosphatidylcholine-s 95.3 0.025 5.5E-07 54.6 4.9 58 164-223 193-265 (642)
184 COG4782 Uncharacterized protei 95.2 0.084 1.8E-06 48.0 7.7 93 97-205 116-210 (377)
185 PLN03037 lipase class 3 family 95.2 0.052 1.1E-06 51.7 6.4 56 164-221 298-358 (525)
186 PLN02633 palmitoyl protein thi 95.1 0.88 1.9E-05 40.8 13.7 109 97-227 25-137 (314)
187 PLN00413 triacylglycerol lipas 95.1 0.074 1.6E-06 50.1 7.3 39 184-222 282-328 (479)
188 PF11339 DUF3141: Protein of u 95.0 0.58 1.3E-05 44.7 12.8 110 96-225 67-179 (581)
189 PF07082 DUF1350: Protein of u 95.0 0.3 6.4E-06 42.4 10.0 100 100-218 19-122 (250)
190 COG3243 PhaC Poly(3-hydroxyalk 94.8 0.11 2.4E-06 48.2 7.5 110 97-224 107-220 (445)
191 PLN02324 triacylglycerol lipas 94.7 0.12 2.6E-06 48.1 7.5 32 174-205 203-234 (415)
192 PF03959 FSH1: Serine hydrolas 94.7 0.16 3.4E-06 42.8 7.8 117 97-221 4-145 (212)
193 KOG3967 Uncharacterized conser 94.6 0.29 6.3E-06 41.7 8.7 84 122-221 138-227 (297)
194 PLN02408 phospholipase A1 94.4 0.093 2E-06 48.1 5.9 48 174-221 188-240 (365)
195 PLN02934 triacylglycerol lipas 94.3 0.16 3.4E-06 48.4 7.3 47 174-222 311-365 (515)
196 PF02273 Acyl_transf_2: Acyl t 94.2 1.5 3.2E-05 38.3 12.4 105 97-221 29-134 (294)
197 PF01083 Cutinase: Cutinase; 94.2 0.63 1.4E-05 38.3 10.0 59 163-223 60-124 (179)
198 KOG3975 Uncharacterized conser 94.1 0.54 1.2E-05 41.0 9.5 108 97-217 28-143 (301)
199 KOG2112 Lysophospholipase [Lip 93.9 0.33 7.1E-06 40.9 7.7 38 182-219 89-126 (206)
200 COG2382 Fes Enterochelin ester 93.8 0.13 2.8E-06 45.7 5.5 60 165-224 153-215 (299)
201 PLN02761 lipase class 3 family 93.3 0.18 3.8E-06 48.1 5.9 22 184-205 292-313 (527)
202 PLN02802 triacylglycerol lipas 93.3 0.17 3.6E-06 48.1 5.7 48 175-222 319-371 (509)
203 PLN02753 triacylglycerol lipas 92.4 0.31 6.6E-06 46.6 6.1 21 185-205 311-331 (531)
204 PF02089 Palm_thioest: Palmito 92.4 1.5 3.3E-05 38.7 10.0 116 96-227 4-122 (279)
205 COG3946 VirJ Type IV secretory 92.3 0.59 1.3E-05 43.3 7.6 62 121-202 280-342 (456)
206 KOG2541 Palmitoyl protein thio 92.3 3.7 8E-05 36.2 12.0 111 98-228 24-135 (296)
207 PLN02719 triacylglycerol lipas 92.1 0.33 7.2E-06 46.3 5.9 32 174-205 283-317 (518)
208 PLN02847 triacylglycerol lipas 92.0 0.37 8E-06 46.8 6.0 32 172-205 239-270 (633)
209 PF07519 Tannase: Tannase and 92.0 0.31 6.7E-06 46.4 5.6 49 172-220 100-149 (474)
210 KOG2237 Predicted serine prote 91.8 0.14 3E-06 49.8 3.1 84 127-218 498-581 (712)
211 PF11288 DUF3089: Protein of u 91.8 0.48 1E-05 40.1 5.9 71 129-207 46-116 (207)
212 KOG4569 Predicted lipase [Lipi 91.5 0.34 7.3E-06 44.0 5.1 46 174-221 161-212 (336)
213 KOG4540 Putative lipase essent 91.5 0.36 7.9E-06 42.8 5.0 43 173-220 265-307 (425)
214 COG5153 CVT17 Putative lipase 91.5 0.36 7.9E-06 42.8 5.0 43 173-220 265-307 (425)
215 KOG1283 Serine carboxypeptidas 90.6 1.1 2.4E-05 40.5 7.2 97 97-207 30-143 (414)
216 KOG1516 Carboxylesterase and r 90.6 0.7 1.5E-05 44.3 6.6 56 167-222 173-233 (545)
217 COG4947 Uncharacterized protei 90.0 0.37 8.1E-06 39.7 3.6 37 187-223 102-138 (227)
218 PF05277 DUF726: Protein of un 89.7 0.82 1.8E-05 41.7 5.9 40 184-223 218-262 (345)
219 PF05705 DUF829: Eukaryotic pr 89.7 3.1 6.7E-05 35.3 9.3 103 99-222 1-113 (240)
220 KOG1202 Animal-type fatty acid 87.4 4.5 9.8E-05 42.7 9.8 80 96-206 2122-2202(2376)
221 KOG4388 Hormone-sensitive lipa 86.4 3.8 8.3E-05 39.9 8.2 103 100-221 399-508 (880)
222 KOG1551 Uncharacterized conser 85.8 2.2 4.7E-05 37.7 5.8 100 98-211 113-220 (371)
223 COG1505 Serine proteases of th 85.8 1 2.2E-05 43.7 4.2 115 97-222 420-535 (648)
224 TIGR03712 acc_sec_asp2 accesso 84.2 6.5 0.00014 37.5 8.6 99 87-209 281-381 (511)
225 KOG2029 Uncharacterized conser 80.5 3.6 7.8E-05 40.1 5.5 52 171-222 511-573 (697)
226 PF03283 PAE: Pectinacetyleste 78.2 13 0.00029 34.1 8.4 58 170-228 140-203 (361)
227 KOG3043 Predicted hydrolase re 76.4 1.8 4E-05 37.1 2.1 94 118-216 57-150 (242)
228 PF08237 PE-PPE: PE-PPE domain 73.4 12 0.00027 31.9 6.5 23 184-206 46-68 (225)
229 COG0324 MiaA tRNA delta(2)-iso 72.6 19 0.00041 32.4 7.7 89 98-195 3-102 (308)
230 PLN02840 tRNA dimethylallyltra 71.5 21 0.00045 33.6 8.0 89 97-194 20-119 (421)
231 PF09949 DUF2183: Uncharacteri 68.9 26 0.00057 26.0 6.6 41 174-216 55-97 (100)
232 PLN02748 tRNA dimethylallyltra 68.6 34 0.00074 32.6 8.8 89 97-194 21-120 (468)
233 PRK00091 miaA tRNA delta(2)-is 65.0 33 0.00072 30.7 7.7 35 98-137 4-38 (307)
234 KOG3253 Predicted alpha/beta h 60.1 31 0.00068 34.0 6.8 66 161-226 223-291 (784)
235 PF11713 Peptidase_C80: Peptid 58.8 14 0.0003 29.8 3.7 42 157-198 73-116 (157)
236 TIGR00174 miaA tRNA isopenteny 57.7 44 0.00095 29.7 7.0 87 100-195 1-98 (287)
237 KOG2521 Uncharacterized conser 56.7 53 0.0011 30.1 7.5 109 96-222 37-153 (350)
238 PRK14729 miaA tRNA delta(2)-is 56.6 58 0.0013 29.1 7.7 87 98-194 4-101 (300)
239 PF04083 Abhydro_lipase: Parti 51.0 11 0.00024 25.5 1.7 19 96-114 42-60 (63)
240 COG1576 Uncharacterized conser 46.0 29 0.00064 27.9 3.6 43 128-197 67-109 (155)
241 PLN02165 adenylate isopentenyl 45.2 1E+02 0.0022 28.1 7.4 36 97-137 42-77 (334)
242 KOG2551 Phospholipase/carboxyh 42.9 93 0.002 26.7 6.3 101 97-205 5-123 (230)
243 PF04301 DUF452: Protein of un 41.8 72 0.0016 27.1 5.6 37 187-225 58-94 (213)
244 PF09994 DUF2235: Uncharacteri 38.8 2.7E+02 0.0058 24.3 9.2 33 173-206 80-112 (277)
245 KOG2385 Uncharacterized conser 38.4 1.2E+02 0.0027 29.4 7.0 43 184-226 445-492 (633)
246 PF12242 Eno-Rase_NADH_b: NAD( 35.6 1.2E+02 0.0026 21.5 5.0 43 167-209 20-63 (78)
247 PF10081 Abhydrolase_9: Alpha/ 35.3 61 0.0013 28.9 4.2 36 186-221 109-147 (289)
248 PF01972 SDH_sah: Serine dehyd 35.2 1.9E+02 0.0041 25.7 7.2 82 119-215 39-125 (285)
249 cd07212 Pat_PNPLA9 Patatin-lik 33.9 61 0.0013 29.0 4.2 21 188-208 34-54 (312)
250 PF02590 SPOUT_MTase: Predicte 32.8 56 0.0012 26.2 3.4 53 127-207 66-118 (155)
251 PRK00103 rRNA large subunit me 32.2 89 0.0019 25.1 4.5 44 128-197 67-110 (157)
252 PF08484 Methyltransf_14: C-me 31.4 1.4E+02 0.0031 24.0 5.6 48 164-215 51-98 (160)
253 PF07992 Pyr_redox_2: Pyridine 29.5 66 0.0014 25.7 3.4 27 187-213 1-27 (201)
254 TIGR00246 tRNA_RlmH_YbeA rRNA 29.4 90 0.0019 25.0 4.0 44 128-198 65-108 (153)
255 PRK02399 hypothetical protein; 28.4 2E+02 0.0043 27.0 6.6 112 100-216 5-127 (406)
256 cd07207 Pat_ExoU_VipD_like Exo 28.4 83 0.0018 25.4 3.8 34 172-208 16-49 (194)
257 PF01494 FAD_binding_3: FAD bi 27.8 71 0.0015 27.7 3.6 24 187-210 3-26 (356)
258 PF06441 EHN: Epoxide hydrolas 27.3 33 0.00071 26.0 1.1 17 97-113 92-108 (112)
259 PRK13690 hypothetical protein; 27.2 1.5E+02 0.0032 24.6 4.9 33 164-196 4-36 (184)
260 PHA02595 tk.4 hypothetical pro 26.3 42 0.00091 26.7 1.6 17 193-209 29-45 (154)
261 cd01714 ETF_beta The electron 26.2 3.5E+02 0.0075 22.4 7.3 21 187-207 110-134 (202)
262 PF06792 UPF0261: Uncharacteri 24.1 6E+02 0.013 23.8 10.8 113 100-217 3-126 (403)
263 PF08386 Abhydrolase_4: TAP-li 23.8 2.1E+02 0.0045 20.9 4.9 41 98-142 35-76 (103)
264 PF13552 DUF4127: Protein of u 23.7 1.4E+02 0.0031 28.6 5.0 61 118-192 50-110 (497)
265 cd07198 Patatin Patatin-like p 23.7 1.1E+02 0.0023 24.4 3.6 23 187-209 27-49 (172)
266 PF02230 Abhydrolase_2: Phosph 23.7 2.4E+02 0.0053 23.1 5.9 60 97-176 155-214 (216)
267 cd07225 Pat_PNPLA6_PNPLA7 Pata 23.3 1.1E+02 0.0024 27.3 3.9 22 187-208 44-65 (306)
268 PRK13512 coenzyme A disulfide 22.2 1.4E+02 0.003 27.8 4.5 21 187-207 3-23 (438)
269 PF14253 AbiH: Bacteriophage a 21.0 94 0.002 26.6 2.9 19 186-204 235-253 (270)
270 cd07210 Pat_hypo_W_succinogene 20.7 1.4E+02 0.0031 25.1 3.9 22 187-208 29-50 (221)
271 PRK11460 putative hydrolase; P 20.5 4.2E+02 0.0092 22.1 6.8 43 97-140 148-190 (232)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=7.1e-53 Score=375.36 Aligned_cols=185 Identities=51% Similarity=0.967 Sum_probs=177.1
Q ss_pred CCCceeeEEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeE
Q 025920 52 SEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADAIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALL 131 (246)
Q Consensus 52 ~~~~~~~~~~q~lDhf~~~p~~~~tF~qry~~~~~~~~~g~~~~~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~V 131 (246)
..+++++||+|+||||+|+ ++.||+|||++|++||++| ++|||+|.|+||++++|..++|||.++|+++++.+
T Consensus 42 ~~~ye~~yf~q~LDHFsF~--~~~tF~qRylin~~fw~~g-----~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~All 114 (492)
T KOG2183|consen 42 EYNYETRYFQQPLDHFSFT--DNKTFDQRYLINDDFWKKG-----EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALL 114 (492)
T ss_pred cccceeEEeeccccccccc--CccceeeEEEEecccccCC-----CCceEEEeCCcccHHHHHhccchHHhhhHhhCceE
Confidence 5689999999999999997 5799999999999999884 49999999999999999999999999999999999
Q ss_pred EEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCce
Q 025920 132 VYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVA 211 (246)
Q Consensus 132 i~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v 211 (246)
|++|||+||+|.|+++. ++++.++++|||++|+++|++.+++.+|++++.+..|+|++|+|||||||+|+|+||||+|
T Consensus 115 VFaEHRyYGeS~PFG~~--s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv 192 (492)
T KOG2183|consen 115 VFAEHRYYGESLPFGSQ--SYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIV 192 (492)
T ss_pred EEeehhccccCCCCcch--hccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhh
Confidence 99999999999999975 6788899999999999999999999999999888999999999999999999999999999
Q ss_pred eEEEEecCcccccCCCCChhhHHHHHHHHHhhhh
Q 025920 212 LGALASSAPILYFDDITPQNGYYSIVTRDFRVIY 245 (246)
Q Consensus 212 ~g~i~sSap~~~~~~~~~~~~~~~~v~~~~~~~~ 245 (246)
.|++++|||+++++|..|...|+++|++||+++.
T Consensus 193 ~GAlAaSAPvl~f~d~vp~~~f~~ivT~~F~~as 226 (492)
T KOG2183|consen 193 LGALAASAPVLYFEDTVPKDVFYRIVTRDFKDAS 226 (492)
T ss_pred hhhhhccCceEeecCCCCcchhhhHHHHHHHhhc
Confidence 9999999999999999999999999999999874
No 2
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=2.7e-42 Score=320.73 Aligned_cols=166 Identities=50% Similarity=0.829 Sum_probs=132.7
Q ss_pred eecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccC
Q 025920 62 QTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADAIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGK 141 (246)
Q Consensus 62 q~lDhf~~~p~~~~tF~qry~~~~~~~~~g~~~~~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~ 141 (246)
|+||||+ +++.+||+||||++++||++ ++||||+.|||++.+.+....+++.++|+++|+.||++|||+||+
T Consensus 1 Q~lDHf~--~~~~~tf~qRY~~n~~~~~~------~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~ 72 (434)
T PF05577_consen 1 QPLDHFN--PSNNGTFSQRYWVNDQYYKP------GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGK 72 (434)
T ss_dssp EES-SS---SSTT-EEEEEEEEE-TT--T------TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTT
T ss_pred CCCCCCC--CCCCCeEEEEEEEEhhhcCC------CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcC
Confidence 8999998 45679999999999999987 499999999999998776667799999999999999999999999
Q ss_pred CCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 142 SIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYN-ARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 142 S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~-~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
|.|+++.+ .++++|||++|+++|++.|+++++.++. .++.|||++|+||||+||+|+|.||||.|.|+|+||||
T Consensus 73 S~P~~~~s-----~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 73 SQPFGDLS-----TENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp B-TTGGGG-----GSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--
T ss_pred CCCccccc-----hhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccce
Confidence 99998763 3799999999999999999999998763 46679999999999999999999999999999999999
Q ss_pred ccccCCCCChhhHHHHHHHHHhh
Q 025920 221 ILYFDDITPQNGYYSIVTRDFRV 243 (246)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~~~~~ 243 (246)
+.++.|+ .+|+++|+++++.
T Consensus 148 v~a~~df---~~y~~~v~~~~~~ 167 (434)
T PF05577_consen 148 VQAKVDF---WEYFEVVTESLRK 167 (434)
T ss_dssp CCHCCTT---THHHHHHHHHHHC
T ss_pred eeeeccc---HHHHHHHHHHHHh
Confidence 9999777 6899999998864
No 3
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=4.7e-37 Score=280.26 Aligned_cols=176 Identities=35% Similarity=0.581 Sum_probs=151.6
Q ss_pred CCCceeeEEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCccc--cchhHHHHHHHHcCC
Q 025920 52 SEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADAIAPIFVYLGAEEALDGDI--SVIGFLTDNAARFNA 129 (246)
Q Consensus 52 ~~~~~~~~~~q~lDhf~~~p~~~~tF~qry~~~~~~~~~g~~~~~~~PI~l~hGg~g~~~~~~--~~~~~~~~~a~~~g~ 129 (246)
..+.++.+|.|++|||+ ++.+.|.|||+++..+|-. +++|||++.||||.....+ .....+.++|+++|+
T Consensus 48 ~~~~~~~~~~Q~lDhF~---~~~~~~~Qq~~y~n~~~~~-----~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA 119 (514)
T KOG2182|consen 48 PANVEQSTFTQKLDHFD---SSNGKFFQQRFYNNNQWAK-----PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGA 119 (514)
T ss_pred cccccccchhhhhhhhh---cchhhhhhhheeecccccc-----CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCC
Confidence 57889999999999995 3456676777777667733 4799999999999987332 223477899999999
Q ss_pred eEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCC-CCEEEEecChHHHHHHHHHHHCC
Q 025920 130 LLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARH-SPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 130 ~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~-~p~ilvG~S~GG~la~~~~~~yP 208 (246)
.|+.+|||+||+|.|.++.+ .++++||+++|+++|+++||+.++.+++..+ .|||.+|+||.|+|++|+|++||
T Consensus 120 ~v~~lEHRFYG~S~P~~~~s-----t~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP 194 (514)
T KOG2182|consen 120 TVFQLEHRFYGQSSPIGDLS-----TSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYP 194 (514)
T ss_pred eeEEeeeeccccCCCCCCCc-----ccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCc
Confidence 99999999999999988763 3789999999999999999999999986544 49999999999999999999999
Q ss_pred CceeEEEEecCcccccCCCCChhhHHHHHHHHHhh
Q 025920 209 HVALGALASSAPILYFDDITPQNGYYSIVTRDFRV 243 (246)
Q Consensus 209 ~~v~g~i~sSap~~~~~~~~~~~~~~~~v~~~~~~ 243 (246)
|.+.|+|+||||+++.-|+ ++|..+|+++++.
T Consensus 195 el~~GsvASSapv~A~~DF---~EY~~VVe~s~~~ 226 (514)
T KOG2182|consen 195 ELTVGSVASSAPVLAKVDF---YEYLMVVEESLRR 226 (514)
T ss_pred hhheeecccccceeEEecH---HHHHHHHHHHHHh
Confidence 9999999999999999655 8999999999874
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=99.77 E-value=1.6e-18 Score=156.37 Aligned_cols=155 Identities=28% Similarity=0.385 Sum_probs=123.1
Q ss_pred ceeeEEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEE
Q 025920 55 FQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADAIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYI 134 (246)
Q Consensus 55 ~~~~~~~q~lDhf~~~p~~~~tF~qry~~~~~~~~~g~~~~~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~ 134 (246)
+-..+|+||+||.+ |+ .+||+||..+..+- ...|.+++..|-+....- .-.+..+-.+++-+.+
T Consensus 31 ffvl~y~QPvDH~~--P~-~gtF~QRvtLlHk~--------~drPtV~~T~GY~~~~~p-----~r~Ept~Lld~NQl~v 94 (448)
T PF05576_consen 31 FFVLRYTQPVDHRH--PE-KGTFQQRVTLLHKD--------FDRPTVLYTEGYNVSTSP-----RRSEPTQLLDGNQLSV 94 (448)
T ss_pred EEEEeeecCCCCCC--CC-CCceEEEEEEEEcC--------CCCCeEEEecCcccccCc-----cccchhHhhccceEEE
Confidence 44558999999998 74 78999999987542 357888888766554321 1135555668899999
Q ss_pred ccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEE
Q 025920 135 EHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGA 214 (246)
Q Consensus 135 D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~ 214 (246)
|||+||.|.|.+ .++++||++|+..|..++++.+|.-+. .+||--|.|-|||.++.++..||+.|++.
T Consensus 95 EhRfF~~SrP~p---------~DW~~Lti~QAA~D~Hri~~A~K~iY~---~kWISTG~SKGGmTa~y~rrFyP~DVD~t 162 (448)
T PF05576_consen 95 EHRFFGPSRPEP---------ADWSYLTIWQAASDQHRIVQAFKPIYP---GKWISTGGSKGGMTAVYYRRFYPDDVDGT 162 (448)
T ss_pred EEeeccCCCCCC---------CCcccccHhHhhHHHHHHHHHHHhhcc---CCceecCcCCCceeEEEEeeeCCCCCCee
Confidence 999999999843 589999999999999999999998773 47999999999999999999999999999
Q ss_pred EEecCcccccCCCC-ChhhHHHHH
Q 025920 215 LASSAPILYFDDIT-PQNGYYSIV 237 (246)
Q Consensus 215 i~sSap~~~~~~~~-~~~~~~~~v 237 (246)
|+..||....+... ....|.+.|
T Consensus 163 VaYVAP~~~~~~eD~~y~~Fl~~V 186 (448)
T PF05576_consen 163 VAYVAPNDVVNREDSRYDRFLEKV 186 (448)
T ss_pred eeeecccccCcccchhHHHHHHhc
Confidence 99999987543322 333465544
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.70 E-value=3.8e-16 Score=141.18 Aligned_cols=110 Identities=21% Similarity=0.174 Sum_probs=83.1
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCC-CCHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGY-FNSAQAITDYAAIL 174 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~y-lt~~q~l~D~~~~i 174 (246)
++++|+|+||..++...++. .+...++ +.|+.|+++|+||||+|... ..+ .+.++.++|+.+++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~--~~~~~l~-~~g~~v~~~D~~G~G~S~~~------------~~~~~~~~~~~~dv~~~l 150 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFE--GIARKIA-SSGYGVFAMDYPGFGLSEGL------------HGYIPSFDDLVDDVIEHY 150 (349)
T ss_pred CCeEEEEECCCCCccchHHH--HHHHHHH-hCCCEEEEecCCCCCCCCCC------------CCCcCCHHHHHHHHHHHH
Confidence 45679999998776553322 2333333 45899999999999999642 122 25678899999998
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+.++.+...++.|++|+||||||++++.++.++|+.+.++|+.++.
T Consensus 151 ~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 151 SKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 8887543334458999999999999999999999999999988753
No 6
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.65 E-value=3.8e-15 Score=130.02 Aligned_cols=118 Identities=22% Similarity=0.249 Sum_probs=92.8
Q ss_pred CCCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCC-CHHHHHHHHHHH
Q 025920 95 DAIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYF-NSAQAITDYAAI 173 (246)
Q Consensus 95 ~~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~yl-t~~q~l~D~~~~ 173 (246)
++.+-|+++||..+.+.+.+. .+ +......|+.|+++||+|||.|+... .|. +.+..++|+..+
T Consensus 52 ~pr~lv~~~HG~g~~~s~~~~--~~-a~~l~~~g~~v~a~D~~GhG~SdGl~------------~yi~~~d~~v~D~~~~ 116 (313)
T KOG1455|consen 52 EPRGLVFLCHGYGEHSSWRYQ--ST-AKRLAKSGFAVYAIDYEGHGRSDGLH------------AYVPSFDLVVDDVISF 116 (313)
T ss_pred CCceEEEEEcCCcccchhhHH--HH-HHHHHhCCCeEEEeeccCCCcCCCCc------------ccCCcHHHHHHHHHHH
Confidence 456889999998887754432 12 33334579999999999999998421 233 456789999999
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCCCC
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFDDIT 228 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~~~~ 228 (246)
.+.++.+-..++.|.+++||||||++++.+..+.|+.++|+|++ ||++...+..
T Consensus 117 ~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilv-aPmc~i~~~~ 170 (313)
T KOG1455|consen 117 FDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILV-APMCKISEDT 170 (313)
T ss_pred HHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceee-ecccccCCcc
Confidence 99988776667789999999999999999999999999999975 6777776654
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.65 E-value=2.9e-15 Score=134.06 Aligned_cols=111 Identities=17% Similarity=0.138 Sum_probs=82.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
++.|+++||..++....+. .+.+...+.|++|+++|+||||+|.... . ...+.++.++|+..+++.
T Consensus 59 ~~~VvllHG~~~~~~~~~~---~~~~~L~~~Gy~V~~~D~rGhG~S~~~~----------~-~~~~~~~~~~D~~~~i~~ 124 (330)
T PLN02298 59 RALIFMVHGYGNDISWTFQ---STAIFLAQMGFACFALDLEGHGRSEGLR----------A-YVPNVDLVVEDCLSFFNS 124 (330)
T ss_pred ceEEEEEcCCCCCcceehh---HHHHHHHhCCCEEEEecCCCCCCCCCcc----------c-cCCCHHHHHHHHHHHHHH
Confidence 4558999998655432221 2232234568999999999999996311 0 123567889999999999
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
++......+.|++|+||||||++++.++.++|+.|+++|+.+++.
T Consensus 125 l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 125 VKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 986533344589999999999999999999999999999887654
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.64 E-value=2.8e-15 Score=130.36 Aligned_cols=110 Identities=20% Similarity=0.218 Sum_probs=80.7
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
+++.||++||..++...|.. + .+...+.|+.|+++|+||||.|.+.. ...-+..+.++|+...+.
T Consensus 24 ~~~~v~llHG~~~~~~~~~~---~-~~~l~~~g~~via~D~~G~G~S~~~~-----------~~~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 24 PKALVFISHGAGEHSGRYEE---L-AENISSLGILVFSHDHIGHGRSNGEK-----------MMIDDFGVYVRDVVQHVV 88 (276)
T ss_pred CCEEEEEeCCCccccchHHH---H-HHHHHhCCCEEEEccCCCCCCCCCcc-----------CCcCCHHHHHHHHHHHHH
Confidence 34445555998777665542 3 33334568999999999999997521 112244567888888887
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
.++... +..|++++||||||++|+.++.++|+.++++|+.++++.
T Consensus 89 ~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 89 TIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 776554 345899999999999999999999999999999886543
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=6e-15 Score=130.40 Aligned_cols=104 Identities=11% Similarity=0.057 Sum_probs=79.5
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||..++...|. .++..+ .+.|++|+++|+||||+|.+.. ....++.++..+|+.+++++
T Consensus 46 ~~~lvliHG~~~~~~~w~---~~~~~L-~~~gy~vi~~Dl~G~G~S~~~~----------~~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 46 GPPVLLLHGEPSWSYLYR---KMIPIL-AAAGHRVIAPDLIGFGRSDKPT----------RREDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred CCEEEEECCCCCchhhHH---HHHHHH-HhCCCEEEEECCCCCCCCCCCC----------CcccCCHHHHHHHHHHHHHH
Confidence 468999999877766553 233333 3458999999999999997532 11234667788888877776
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+. ..+++++||||||++|+.++.++|+.|.++++.++.
T Consensus 112 l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 112 LD------LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred cC------CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 53 237999999999999999999999999999987754
No 10
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.61 E-value=5.3e-15 Score=130.03 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=84.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||..++...|.. .+..++.+ ++|+++|+||||.|.+.... ....-..++.++..+|+.++++.
T Consensus 29 ~~~vlllHG~~~~~~~w~~---~~~~L~~~--~~vi~~DlpG~G~S~~~~~~-----~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRK---NTPVLAKS--HRVYAIDLLGYGYSDKPNPR-----SAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred CCeEEEECCCCCChhHHHH---HHHHHHhC--CeEEEEcCCCCCCCCCCccc-----cccccccCCHHHHHHHHHHHHHH
Confidence 5789999999988876643 44455543 69999999999999753210 00111346788899999999887
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+.. .+++++||||||++++.++.++|+.|.++|+.+++.
T Consensus 99 l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 99 VVG------DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred hcC------CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 642 379999999999999999999999999999887654
No 11
>PLN02965 Probable pheophorbidase
Probab=99.60 E-value=8.1e-15 Score=126.53 Aligned_cols=104 Identities=19% Similarity=-0.003 Sum_probs=79.0
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
...|+|+||...+.+.|. ..+..++ +.+++|+++|+||||.|.... ....+.++..+|+.++++.
T Consensus 3 ~~~vvllHG~~~~~~~w~---~~~~~L~-~~~~~via~Dl~G~G~S~~~~-----------~~~~~~~~~a~dl~~~l~~ 67 (255)
T PLN02965 3 EIHFVFVHGASHGAWCWY---KLATLLD-AAGFKSTCVDLTGAGISLTDS-----------NTVSSSDQYNRPLFALLSD 67 (255)
T ss_pred ceEEEEECCCCCCcCcHH---HHHHHHh-hCCceEEEecCCcCCCCCCCc-----------cccCCHHHHHHHHHHHHHh
Confidence 356999999988776553 2333333 457999999999999996311 1234677888888888876
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+.. ..+++++||||||++++.++.++|+.|.++|+.++.
T Consensus 68 l~~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 68 LPP-----DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred cCC-----CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 531 137999999999999999999999999999986654
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.59 E-value=1.5e-14 Score=130.06 Aligned_cols=112 Identities=17% Similarity=0.073 Sum_probs=82.9
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCC-CCCHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLG-YFNSAQAITDYAAIL 174 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~-ylt~~q~l~D~~~~i 174 (246)
++++|+++||..++...+.. +...+ .+.|+.|+++|+||||.|.+.... ...+ ..+.++.++|+..++
T Consensus 53 ~~~~vll~HG~~~~~~~y~~---~~~~l-~~~g~~v~~~D~~G~G~S~~~~~~-------~~~~~~~~~~~~~~d~~~~~ 121 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAE---LAYDL-FHLGYDVLIIDHRGQGRSGRLLDD-------PHRGHVERFNDYVDDLAAFW 121 (330)
T ss_pred CCcEEEEECCccchHHHHHH---HHHHH-HHCCCeEEEEcCCCCCCCCCCCCC-------CCcCccccHHHHHHHHHHHH
Confidence 45689999998766544432 22233 357899999999999999752110 1111 236788899999999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+.+.... +..|++++||||||++++.++.++|+.++++|+.++.
T Consensus 122 ~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 122 QQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 8875543 3458999999999999999999999999999987654
No 13
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.58 E-value=5.1e-15 Score=129.11 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=79.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||..++...|. .++..+.+ +++|+++|+||||+|.... ..++.++..+|+.++++.
T Consensus 25 ~~plvllHG~~~~~~~w~---~~~~~L~~--~~~vi~~Dl~G~G~S~~~~------------~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVF---PFIEALDP--DLEVIAFDVPGVGGSSTPR------------HPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CCcEEEEeCCCcchHHHH---HHHHHhcc--CceEEEECCCCCCCCCCCC------------CcCcHHHHHHHHHHHHHH
Confidence 369999999888876553 34444433 5899999999999996411 123567778888888887
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+.. .+++|+||||||++++.++.++|+.++++|+.+++.
T Consensus 88 l~~------~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 88 LDY------GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred hCc------CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 642 379999999999999999999999999999887654
No 14
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.58 E-value=1.8e-14 Score=123.37 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=80.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+++||+.++...++. .+..++.+.|+.|+++|+||||.|..... ...+++.++..+|+..+++.
T Consensus 25 ~~~vl~~hG~~g~~~~~~~---~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLE---NLRELLKEEGREVIMYDQLGCGYSDQPDD---------SDELWTIDYFVDELEEVREK 92 (288)
T ss_pred CCeEEEEcCCCCccHHHHH---HHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------ccccccHHHHHHHHHHHHHH
Confidence 5789999998877654432 44555565689999999999999974211 11246777888888777665
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
++ ..+++++||||||.+++.++.++|+.+.++++.++
T Consensus 93 ~~------~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 93 LG------LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred cC------CCcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 43 23699999999999999999999999999987664
No 15
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.57 E-value=1.4e-14 Score=128.87 Aligned_cols=110 Identities=26% Similarity=0.298 Sum_probs=86.4
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCC-CHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYF-NSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~yl-t~~q~l~D~~~~i~ 175 (246)
.+.|+++||..+....+.. +.+.....|+.|+++||||||.|.+ + ..++. +.++.+.|+..+++
T Consensus 34 ~g~Vvl~HG~~Eh~~ry~~----la~~l~~~G~~V~~~D~RGhG~S~r-~----------~rg~~~~f~~~~~dl~~~~~ 98 (298)
T COG2267 34 KGVVVLVHGLGEHSGRYEE----LADDLAARGFDVYALDLRGHGRSPR-G----------QRGHVDSFADYVDDLDAFVE 98 (298)
T ss_pred CcEEEEecCchHHHHHHHH----HHHHHHhCCCEEEEecCCCCCCCCC-C----------CcCCchhHHHHHHHHHHHHH
Confidence 3789999998888876643 3444556799999999999999963 1 11222 35678999999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
.+.... ...|++++||||||.+++.++.++++.++|+|++| |.+..
T Consensus 99 ~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLss-P~~~l 144 (298)
T COG2267 99 TIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSS-PALGL 144 (298)
T ss_pred HHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEEC-ccccC
Confidence 887642 45799999999999999999999999999999876 55444
No 16
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.56 E-value=2.4e-14 Score=117.64 Aligned_cols=102 Identities=22% Similarity=0.219 Sum_probs=80.5
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHH
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKE 179 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~ 179 (246)
||++||..++...|.. ++..++ .|+.|+++|+||||.|.+.. .....+.++.++|+.++++.+..
T Consensus 1 vv~~hG~~~~~~~~~~---~~~~l~--~~~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDP---LAEALA--RGYRVIAFDLPGHGRSDPPP----------DYSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGGHH---HHHHHH--TTSEEEEEECTTSTTSSSHS----------SGSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHHHH---HHHHHh--CCCEEEEEecCCcccccccc----------ccCCcchhhhhhhhhhccccccc
Confidence 7899999998866543 444443 58999999999999997522 12335677888888888776553
Q ss_pred HcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 180 KYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 180 ~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
.|++++|||+||.+++.++.++|+.+.++|+.+++..
T Consensus 66 ------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 ------KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp ------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ------ccccccccccccccccccccccccccccceeeccccc
Confidence 4799999999999999999999999999999887764
No 17
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.56 E-value=2.1e-14 Score=126.30 Aligned_cols=102 Identities=16% Similarity=0.034 Sum_probs=81.1
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+++||..++...|. .++..++++ +.|+++|+||||.|.+.. ..++.+...+|+..+++.
T Consensus 27 g~~vvllHG~~~~~~~w~---~~~~~L~~~--~~via~D~~G~G~S~~~~------------~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWR---NIIPHLAGL--GRCLAPDLIGMGASDKPD------------IDYTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEECCCCCCHHHHH---HHHHHHhhC--CEEEEEcCCCCCCCCCCC------------CCCCHHHHHHHHHHHHHH
Confidence 579999999988776654 244445443 499999999999997521 124677888998888887
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
++. .+++++||||||.+|+.++.++|+.|+++|+.+++.
T Consensus 90 l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 90 LGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred hCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 642 479999999999999999999999999999888643
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.55 E-value=3.1e-14 Score=121.69 Aligned_cols=99 Identities=18% Similarity=0.109 Sum_probs=78.5
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.+.||+++||..++...|. .+...+++ ++.|+++|+||||+|.+.. .++.++..+|+.++++
T Consensus 15 ~~~~iv~lhG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~s~~~~-------------~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLG---VLARDLVN--DHDIIQVDMRNHGLSPRDP-------------VMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCCEEEECCCCCchhHHH---HHHHHHhh--CCeEEEECCCCCCCCCCCC-------------CCCHHHHHHHHHHHHH
Confidence 4679999999988876543 24444443 6899999999999997521 2467788899988888
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASS 218 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sS 218 (246)
.+. ..+++++||||||++++.++.++|+.|.++++.+
T Consensus 77 ~l~------~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~ 113 (255)
T PRK10673 77 ALQ------IEKATFIGHSMGGKAVMALTALAPDRIDKLVAID 113 (255)
T ss_pred HcC------CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEe
Confidence 753 2369999999999999999999999999988754
No 19
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.54 E-value=4.7e-14 Score=127.19 Aligned_cols=118 Identities=17% Similarity=0.115 Sum_probs=84.0
Q ss_pred CCCCcEEEEeCCCCCCCc-cc---------------------cchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhh
Q 025920 95 DAIAPIFVYLGAEEALDG-DI---------------------SVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEAL 152 (246)
Q Consensus 95 ~~~~PI~l~hGg~g~~~~-~~---------------------~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~ 152 (246)
++++.|+++||..+.... +. ...+.+.+...+.|+.|+++||||||+|....
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~------ 92 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQ------ 92 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCcccc------
Confidence 357889999997777652 11 01123455556679999999999999997421
Q ss_pred cccccCCC-CCHHHHHHHHHHHHHHHHHHc-----------------CCC-CCCEEEEecChHHHHHHHHHHHCCC----
Q 025920 153 KNASTLGY-FNSAQAITDYAAILLYIKEKY-----------------NAR-HSPVIVVGGSYGGMLATWFRLKYPH---- 209 (246)
Q Consensus 153 ~~~~~~~y-lt~~q~l~D~~~~i~~l~~~~-----------------~~~-~~p~ilvG~S~GG~la~~~~~~yP~---- 209 (246)
....+ .+.++.++|+..+++.++++. ..+ +.|++++||||||++++.++.++++
T Consensus 93 ---~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~ 169 (332)
T TIGR01607 93 ---NLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN 169 (332)
T ss_pred ---ccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc
Confidence 11222 356788999999999887620 012 5699999999999999999887653
Q ss_pred ----ceeEEEEecCcc
Q 025920 210 ----VALGALASSAPI 221 (246)
Q Consensus 210 ----~v~g~i~sSap~ 221 (246)
.++|+|++|+++
T Consensus 170 ~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 170 NDKLNIKGCISLSGMI 185 (332)
T ss_pred ccccccceEEEeccce
Confidence 578888777664
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.53 E-value=3.3e-14 Score=123.47 Aligned_cols=106 Identities=13% Similarity=0.073 Sum_probs=74.2
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+++||..++...|......+..++ +.|++|+++|+||||.|.+... .+.......+|+.++++.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFV-DAGYRVILKDSPGFNKSDAVVM-----------DEQRGLVNARAVKGLMDA 97 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHH-hCCCEEEEECCCCCCCCCCCcC-----------cccccchhHHHHHHHHHH
Confidence 4689999998776654432112233333 3579999999999999975311 000111235666666665
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+. ..+++++||||||++++.++.++|+.+.++|+.+++
T Consensus 98 l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 98 LD------IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred cC------CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 43 247999999999999999999999999999987754
No 21
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.52 E-value=1.3e-13 Score=120.98 Aligned_cols=104 Identities=14% Similarity=0.018 Sum_probs=77.4
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.+|+|+||..++.+.|. .+.....+.|+.|+++|+||||.|.+.. ....+.++..+|+.++++.
T Consensus 18 ~p~vvliHG~~~~~~~w~----~~~~~L~~~g~~vi~~dl~g~G~s~~~~-----------~~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 18 PPHFVLIHGISGGSWCWY----KIRCLMENSGYKVTCIDLKSAGIDQSDA-----------DSVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred CCeEEEECCCCCCcCcHH----HHHHHHHhCCCEEEEecccCCCCCCCCc-----------ccCCCHHHHHHHHHHHHHh
Confidence 457999999888776553 2233334468999999999999885321 1224666777777777665
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+. ...+++++||||||+++..++.++|+.+.++|+.++.
T Consensus 83 l~-----~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 83 LP-----ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred cC-----CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 42 1247999999999999999999999999999987653
No 22
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.51 E-value=2.1e-13 Score=119.41 Aligned_cols=110 Identities=15% Similarity=0.015 Sum_probs=79.5
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.++|+++||..+....+......+.+...+.|+.|+.+|+||||+|.... ...+.++.++|+..+++.
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~------------~~~~~~~~~~Dv~~ai~~ 92 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF------------AAARWDVWKEDVAAAYRW 92 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc------------ccCCHHHHHHHHHHHHHH
Confidence 45688999876544332211112223333569999999999999996311 112456788999988888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+++. + ..|++++|+||||.+++.++.++|+.+.++|+.++++
T Consensus 93 L~~~-~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 93 LIEQ-G--HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHhc-C--CCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 8754 2 3589999999999999999999999999999887544
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.51 E-value=1e-13 Score=119.33 Aligned_cols=103 Identities=17% Similarity=0.049 Sum_probs=78.2
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.+|+++||..++...|. .++..+++ +++|+++|+||||.|.+.. . ...+.+...+|+.++++.
T Consensus 28 ~~~vv~~hG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~S~~~~----------~-~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 28 GPLLLLLHGTGASTHSWR---DLMPPLAR--SFRVVAPDLPGHGFTRAPF----------R-FRFTLPSMAEDLSALCAA 91 (278)
T ss_pred CCeEEEEcCCCCCHHHHH---HHHHHHhh--CcEEEeecCCCCCCCCCcc----------c-cCCCHHHHHHHHHHHHHH
Confidence 568999999888776553 24444443 5899999999999997521 1 124677888888877765
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+. ..+++++||||||++++.++.++|+.+.++++.+++.
T Consensus 92 ~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 92 EG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 42 2478999999999999999999999999888776543
No 24
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.51 E-value=6.2e-14 Score=123.82 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=86.5
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.-|+++||.+.....|.... ..++ ..|++|+++|+||||.|+.. ++...+|++..++|+..+++.
T Consensus 44 gP~illlHGfPe~wyswr~q~---~~la-~~~~rviA~DlrGyG~Sd~P----------~~~~~Yt~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 44 GPIVLLLHGFPESWYSWRHQI---PGLA-SRGYRVIAPDLRGYGFSDAP----------PHISEYTIDELVGDIVALLDH 109 (322)
T ss_pred CCEEEEEccCCccchhhhhhh---hhhh-hcceEEEecCCCCCCCCCCC----------CCcceeeHHHHHHHHHHHHHH
Confidence 455677889988877765433 2333 45699999999999999853 345667899999999999998
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+.. .+++++||+||+++|.+++..||++|+|.+..+.|..
T Consensus 110 Lg~------~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 110 LGL------KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred hcc------ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 872 4799999999999999999999999999999887765
No 25
>PLN02578 hydrolase
Probab=99.50 E-value=1.9e-13 Score=123.97 Aligned_cols=100 Identities=17% Similarity=0.124 Sum_probs=77.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+++||..++...|.. .+..+++ ++.|+++|+||||.|.... .-++.+...+|+..+++.
T Consensus 86 g~~vvliHG~~~~~~~w~~---~~~~l~~--~~~v~~~D~~G~G~S~~~~------------~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRY---NIPELAK--KYKVYALDLLGFGWSDKAL------------IEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CCeEEEECCCCCCHHHHHH---HHHHHhc--CCEEEEECCCCCCCCCCcc------------cccCHHHHHHHHHHHHHH
Confidence 5789999998887654432 3344443 5899999999999997421 123566777888888877
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
+. ..+++++||||||++++.++.++|+.++++++.++
T Consensus 149 ~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 149 VV------KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred hc------cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 64 24799999999999999999999999999987654
No 26
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.50 E-value=7.3e-14 Score=118.01 Aligned_cols=101 Identities=19% Similarity=0.143 Sum_probs=77.1
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.+|+++||..++...|.. .+..+. .+++|+++|+||||.|... ....++.++.++|+.++++.
T Consensus 13 ~~~iv~lhG~~~~~~~~~~---~~~~l~--~~~~vi~~D~~G~G~S~~~-----------~~~~~~~~~~~~~~~~~i~~ 76 (257)
T TIGR03611 13 APVVVLSSGLGGSGSYWAP---QLDVLT--QRFHVVTYDHRGTGRSPGE-----------LPPGYSIAHMADDVLQLLDA 76 (257)
T ss_pred CCEEEEEcCCCcchhHHHH---HHHHHH--hccEEEEEcCCCCCCCCCC-----------CcccCCHHHHHHHHHHHHHH
Confidence 4678899998887765432 332232 3689999999999999642 11224677888888888876
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
++ ..+++++||||||+++..++.++|+.+.++|+.++
T Consensus 77 ~~------~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 77 LN------IERFHFVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred hC------CCcEEEEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 53 23699999999999999999999999999887664
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.50 E-value=1.1e-13 Score=117.49 Aligned_cols=98 Identities=15% Similarity=0.029 Sum_probs=75.1
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.||+++||..++...|.. ....+ .+++|+++|+||||.|.+.. . .+.++..+|+.++++.+
T Consensus 3 p~vvllHG~~~~~~~w~~---~~~~l---~~~~vi~~D~~G~G~S~~~~------------~-~~~~~~~~~l~~~l~~~ 63 (242)
T PRK11126 3 PWLVFLHGLLGSGQDWQP---VGEAL---PDYPRLYIDLPGHGGSAAIS------------V-DGFADVSRLLSQTLQSY 63 (242)
T ss_pred CEEEEECCCCCChHHHHH---HHHHc---CCCCEEEecCCCCCCCCCcc------------c-cCHHHHHHHHHHHHHHc
Confidence 579999999888766542 33322 26899999999999997521 1 15667788888777754
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc-eeEEEEecCc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHV-ALGALASSAP 220 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~-v~g~i~sSap 220 (246)
. ..+++++||||||.+|+.++.++|+. ++++++.+++
T Consensus 64 ~------~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 64 N------ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred C------CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 2 34899999999999999999999765 9998887655
No 28
>PRK06489 hypothetical protein; Provisional
Probab=99.50 E-value=5e-13 Score=121.48 Aligned_cols=112 Identities=15% Similarity=0.179 Sum_probs=73.4
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHH------HHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDN------AARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDY 170 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~------a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~ 170 (246)
+.||+|+||+.++...|.. ..+...+ ....+++||++|+||||+|....+. ...+..-++.++.++|+
T Consensus 69 gpplvllHG~~~~~~~~~~-~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~-----~~~~~~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLS-PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG-----LRAAFPRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCCchhhhcc-chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC-----CCCCCCcccHHHHHHHH
Confidence 4689999999888765531 0122121 0124689999999999999742110 00011124566666666
Q ss_pred HHHHHHHHHHcCCCCCCE-EEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 171 AAILLYIKEKYNARHSPV-IVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 171 ~~~i~~l~~~~~~~~~p~-ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
.+++ .+.++. .++ +++||||||++|+.++.++|+.|.++|+.++
T Consensus 143 ~~~l---~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 143 YRLV---TEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HHHH---HHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 5543 222322 256 5899999999999999999999999997654
No 29
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.50 E-value=1.1e-13 Score=122.90 Aligned_cols=104 Identities=19% Similarity=0.191 Sum_probs=75.6
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+++||++++...+ .+.......+++|+++|+||||.|.+... ..-.+.++..+|+..+++.
T Consensus 27 ~~~lvllHG~~~~~~~~-----~~~~~~~~~~~~vi~~D~~G~G~S~~~~~----------~~~~~~~~~~~dl~~l~~~ 91 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-----GCRRFFDPETYRIVLFDQRGCGKSTPHAC----------LEENTTWDLVADIEKLREK 91 (306)
T ss_pred CCEEEEECCCCCCCCCH-----HHHhccCccCCEEEEECCCCCCCCCCCCC----------cccCCHHHHHHHHHHHHHH
Confidence 57899999988775432 11111223478999999999999975321 1113556777787766665
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
++ ..+++++||||||++++.++.++|+.+.++|+.++.+
T Consensus 92 l~------~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 LG------IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred cC------CCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 43 2369999999999999999999999999999877654
No 30
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.48 E-value=2.2e-13 Score=128.14 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=78.8
Q ss_pred CCcEEEEeCCCCCCCccccc-hhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHH-HHH
Q 025920 97 IAPIFVYLGAEEALDGDISV-IGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYA-AIL 174 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~-~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~-~~i 174 (246)
+.||+|+||..++...|... ...+.+. .+.+++|+++|+||||+|.... -..++.++.++|+. .++
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~-~~~~yrVia~Dl~G~G~S~~p~-----------~~~ytl~~~a~~l~~~ll 268 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDA-AKSTYRLFAVDLLGFGRSPKPA-----------DSLYTLREHLEMIERSVL 268 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHH-hhCCCEEEEECCCCCCCCcCCC-----------CCcCCHHHHHHHHHHHHH
Confidence 47999999998887655321 1222222 1357999999999999996421 12246677777774 555
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+.++ ..+++++||||||++++.++.+||+.|.++|+.++|..
T Consensus 269 ~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 269 ERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 5432 34799999999999999999999999999999887653
No 31
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.48 E-value=2e-13 Score=124.29 Aligned_cols=102 Identities=13% Similarity=0.082 Sum_probs=77.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||..++...|.. .+..++. ++.|+++|+||||+|.+.. .. -++.++..+|+.++++.
T Consensus 88 gp~lvllHG~~~~~~~w~~---~~~~L~~--~~~via~Dl~G~G~S~~~~----------~~-~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRR---NIGVLAK--NYTVYAIDLLGFGASDKPP----------GF-SYTMETWAELILDFLEE 151 (360)
T ss_pred CCeEEEECCCCCCHHHHHH---HHHHHhc--CCEEEEECCCCCCCCCCCC----------Cc-cccHHHHHHHHHHHHHH
Confidence 4689999999887766543 3434433 6899999999999997521 11 23667778888888776
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHH-HCCCceeEEEEecCc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRL-KYPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~-~yP~~v~g~i~sSap 220 (246)
+. ..+++|+||||||.+++.++. ++|+.|.++|+.+++
T Consensus 152 l~------~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 152 VV------QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred hc------CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 53 237999999999999998886 579999999987764
No 32
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.47 E-value=1.8e-13 Score=121.64 Aligned_cols=106 Identities=22% Similarity=0.231 Sum_probs=76.6
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.+.|++++||.++...-|.. -+..+++ ...|+++|++|+|.|+... . ....- .+..-+.+-|+
T Consensus 89 ~~~plVliHGyGAg~g~f~~---Nf~~La~--~~~vyaiDllG~G~SSRP~-F--------~~d~~---~~e~~fvesiE 151 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFR---NFDDLAK--IRNVYAIDLLGFGRSSRPK-F--------SIDPT---TAEKEFVESIE 151 (365)
T ss_pred CCCcEEEEeccchhHHHHHH---hhhhhhh--cCceEEecccCCCCCCCCC-C--------CCCcc---cchHHHHHHHH
Confidence 36899999998887766543 3455565 5789999999999998531 1 01111 12223334455
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+.+.+.+.+ +.+|+|||+||.||+.|++|||+.|..+|+.|+-
T Consensus 152 ~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 152 QWRKKMGLE--KMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred HHHHHcCCc--ceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 555555544 6999999999999999999999999999987753
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.46 E-value=3.4e-13 Score=112.30 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=74.2
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHH-HHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITD-YAAILLY 176 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D-~~~~i~~ 176 (246)
.+|+++||..++...|. .....++ .++.|+++|+||||.|.... .....+.++.++| +..+++.
T Consensus 2 ~~vv~~hG~~~~~~~~~---~~~~~L~--~~~~v~~~d~~g~G~s~~~~----------~~~~~~~~~~~~~~~~~~~~~ 66 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQ---ALIELLG--PHFRCLAIDLPGHGSSQSPD----------EIERYDFEEAAQDILATLLDQ 66 (251)
T ss_pred CEEEEEcCCCCchhhHH---HHHHHhc--ccCeEEEEcCCCCCCCCCCC----------ccChhhHHHHHHHHHHHHHHH
Confidence 57999999888777653 2333333 47999999999999996421 1223455566666 4444443
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+ +..+++++||||||.+++.++.++|+.+.++++.++.
T Consensus 67 ~------~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 67 L------GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred c------CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 3 2347999999999999999999999999999887654
No 34
>PLN02511 hydrolase
Probab=99.46 E-value=5.2e-13 Score=122.90 Aligned_cols=109 Identities=15% Similarity=0.119 Sum_probs=81.9
Q ss_pred CCcEEEEeCCCCCCCc-cccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDG-DISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~-~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
+.+|+++||.+|+... |. ..+...+.+.|++|+++|+||||.|..... +++ .....+|+.++++
T Consensus 100 ~p~vvllHG~~g~s~~~y~---~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~-----------~~~-~~~~~~Dl~~~i~ 164 (388)
T PLN02511 100 APVLILLPGLTGGSDDSYV---RHMLLRARSKGWRVVVFNSRGCADSPVTTP-----------QFY-SASFTGDLRQVVD 164 (388)
T ss_pred CCEEEEECCCCCCCCCHHH---HHHHHHHHHCCCEEEEEecCCCCCCCCCCc-----------CEE-cCCchHHHHHHHH
Confidence 3458889999887654 22 122333456799999999999999964211 111 1245789999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc--eeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHV--ALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~--v~g~i~sSap~~ 222 (246)
+++.++ ++.|++++|+||||++++.++.++|+. +.++++.|+|..
T Consensus 165 ~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 165 HVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred HHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 999876 356899999999999999999999987 788888888763
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.46 E-value=8.2e-13 Score=122.13 Aligned_cols=108 Identities=15% Similarity=0.122 Sum_probs=72.8
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.+.||+++||..++...|.. .+..++. ++.|+++|+||||.|.... ..+.+.+++.+++.+.+.
T Consensus 104 ~~p~vvllHG~~~~~~~~~~---~~~~L~~--~~~vi~~D~rG~G~S~~~~-----------~~~~~~~~~~~~~~~~i~ 167 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFR---NFDALAS--RFRVIAIDQLGWGGSSRPD-----------FTCKSTEETEAWFIDSFE 167 (402)
T ss_pred CCCEEEEECCCCcchhHHHH---HHHHHHh--CCEEEEECCCCCCCCCCCC-----------cccccHHHHHHHHHHHHH
Confidence 45789999998877655432 3344443 5899999999999996421 111122333333332222
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
.+.+..+ ..+++++||||||.+++.++.++|+.+.++|+.+++-
T Consensus 168 ~~~~~l~--~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 168 EWRKAKN--LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHcC--CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 3333332 2379999999999999999999999999999876543
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.46 E-value=5.5e-13 Score=123.00 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=79.6
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCC-CCHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGY-FNSAQAITDYAAIL 174 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~y-lt~~q~l~D~~~~i 174 (246)
++++|+++||..++...+. .+...+ .+.|+.|+++|+||||+|... ..+ .+.++..+|+..++
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~---~~a~~L-~~~Gy~V~~~D~rGhG~S~~~------------~~~~~~~~~~~~Dl~~~l 198 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYL---HFAKQL-TSCGFGVYAMDWIGHGGSDGL------------HGYVPSLDYVVEDTEAFL 198 (395)
T ss_pred CceEEEEECCchHHHHHHH---HHHHHH-HHCCCEEEEeCCCCCCCCCCC------------CCCCcCHHHHHHHHHHHH
Confidence 3568899999877655432 233333 356999999999999999642 122 25567889999999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEecCcc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH---VALGALASSAPI 221 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~---~v~g~i~sSap~ 221 (246)
+.++.+. ++.|++++||||||.+++.++ .+|+ .+.++|+.|+.+
T Consensus 199 ~~l~~~~--~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 199 EKIRSEN--PGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHhC--CCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECccc
Confidence 9998764 345899999999999999775 4664 788999877543
No 37
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.45 E-value=2e-13 Score=117.40 Aligned_cols=93 Identities=16% Similarity=0.160 Sum_probs=68.6
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIK 178 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~ 178 (246)
||+|+||..++...|. .++..+.+ +++|+++|+||||.|... ...+.++.++|+.+
T Consensus 15 ~ivllHG~~~~~~~w~---~~~~~L~~--~~~vi~~Dl~G~G~S~~~-------------~~~~~~~~~~~l~~------ 70 (256)
T PRK10349 15 HLVLLHGWGLNAEVWR---CIDEELSS--HFTLHLVDLPGFGRSRGF-------------GALSLADMAEAVLQ------ 70 (256)
T ss_pred eEEEECCCCCChhHHH---HHHHHHhc--CCEEEEecCCCCCCCCCC-------------CCCCHHHHHHHHHh------
Confidence 5999999888777654 24444433 589999999999999631 11345555555432
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 179 EKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 179 ~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
.. ..+++++||||||.+|+.++.++|+.+.++|+.++
T Consensus 71 --~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 71 --QA--PDKAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred --cC--CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 11 24799999999999999999999999999987654
No 38
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.45 E-value=4.2e-13 Score=118.22 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=73.1
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||.......|. ..+..+. .+++|+++|+||||.|.... +.. ++.++..+++..+++.
T Consensus 34 ~~~iv~lHG~~~~~~~~~---~~~~~l~--~~~~vi~~D~~G~G~S~~~~----------~~~-~~~~~~~~~~~~~~~~ 97 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYR---DIIVALR--DRFRCVAPDYLGFGLSERPS----------GFG-YQIDEHARVIGEFVDH 97 (286)
T ss_pred CCEEEEECCCCccHHHHH---HHHHHHh--CCcEEEEECCCCCCCCCCCC----------ccc-cCHHHHHHHHHHHHHH
Confidence 578999999875443332 2233332 35899999999999997422 111 2445555666555554
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+ + ..+++++||||||+++..++.++|+.+.++|+.+++.
T Consensus 98 ~----~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 98 L----G--LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred h----C--CCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 3 2 2479999999999999999999999999999876654
No 39
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.45 E-value=2.2e-13 Score=113.84 Aligned_cols=101 Identities=16% Similarity=0.088 Sum_probs=74.6
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.+|+++||...+...|. .+...+. .++.|+++|+||||.|.... ..++.++..+|+.++++.+
T Consensus 14 ~~li~~hg~~~~~~~~~---~~~~~l~--~~~~v~~~d~~G~G~s~~~~------------~~~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 14 PVLVFINSLGTDLRMWD---PVLPALT--PDFRVLRYDKRGHGLSDAPE------------GPYSIEDLADDVLALLDHL 76 (251)
T ss_pred CeEEEEcCcccchhhHH---HHHHHhh--cccEEEEecCCCCCCCCCCC------------CCCCHHHHHHHHHHHHHHh
Confidence 45677777766655442 2333332 47999999999999995421 2346778888888777765
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
. ..+++++||||||++++.++.++|+.+.++++.+++.
T Consensus 77 ~------~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 77 G------IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred C------CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 3 2379999999999999999999999999988876543
No 40
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.45 E-value=5.5e-13 Score=122.52 Aligned_cols=107 Identities=11% Similarity=0.038 Sum_probs=83.2
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||..++...|.. .+..+++ +++|+++|+||||.|.+... ....-++.++..+|+..+++.
T Consensus 127 ~~~ivllHG~~~~~~~w~~---~~~~L~~--~~~Via~DlpG~G~S~~p~~--------~~~~~ys~~~~a~~l~~~i~~ 193 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSYRK---VLPVLSK--NYHAIAFDWLGFGFSDKPQP--------GYGFNYTLDEYVSSLESLIDE 193 (383)
T ss_pred CCeEEEECCCCCCHHHHHH---HHHHHhc--CCEEEEECCCCCCCCCCCcc--------cccccCCHHHHHHHHHHHHHH
Confidence 5689999999887766543 4444443 78999999999999975321 011235778888999888887
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
++. .+++|+|||+||++++.++.++|+.|.++|+.+++..
T Consensus 194 l~~------~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 194 LKS------DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred hCC------CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 642 3699999999999999999999999999999887753
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.44 E-value=4.1e-13 Score=121.19 Aligned_cols=105 Identities=17% Similarity=0.116 Sum_probs=73.3
Q ss_pred CCcEEEEeCCCCCCCcccc-----chhHHHHHHH------HcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHH
Q 025920 97 IAPIFVYLGAEEALDGDIS-----VIGFLTDNAA------RFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQ 165 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~-----~~~~~~~~a~------~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q 165 (246)
+.|+||+||+.++...+.. ..+++..+.. ..+++||++|+||||.|.+. ..+.++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--------------~~~~~~ 122 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--------------PIDTAD 122 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--------------CCCHHH
Confidence 4689999988877653100 0001111111 23689999999999988431 124566
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 166 AITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 166 ~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
..+|+.++++.++. +.+++|+||||||++|+.++.+||+.|.++|+.++.
T Consensus 123 ~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 123 QADAIALLLDALGI-----ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred HHHHHHHHHHHcCC-----CcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 78888888877642 123589999999999999999999999999987653
No 42
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.41 E-value=1.1e-12 Score=109.33 Aligned_cols=94 Identities=19% Similarity=0.156 Sum_probs=68.2
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.||+++||..++...|. .....++ .++.|+++|+||||.|.+.. ..+.++.++|+.++
T Consensus 5 ~~iv~~HG~~~~~~~~~---~~~~~l~--~~~~vi~~d~~G~G~s~~~~-------------~~~~~~~~~~~~~~---- 62 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFR---CLDEELS--AHFTLHLVDLPGHGRSRGFG-------------PLSLADAAEAIAAQ---- 62 (245)
T ss_pred ceEEEEcCCCCchhhHH---HHHHhhc--cCeEEEEecCCcCccCCCCC-------------CcCHHHHHHHHHHh----
Confidence 68999999887776553 2333333 36899999999999986421 12444554444322
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
. ..+++++||||||.+++.++.++|+.+.++|+.++
T Consensus 63 ---~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~ 98 (245)
T TIGR01738 63 ---A---PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVAS 98 (245)
T ss_pred ---C---CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecC
Confidence 1 24799999999999999999999999999887544
No 43
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.40 E-value=2.2e-12 Score=108.88 Aligned_cols=119 Identities=18% Similarity=0.222 Sum_probs=84.0
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.+.|+++||+.++...+....+ +.+++.+.|+.|+++|.||+|.+...-+. +.. .... .......|+..+++.
T Consensus 13 ~P~vv~lHG~~~~~~~~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~---~~~-~~~~--~~~~~~~~~~~~i~~ 85 (212)
T TIGR01840 13 RALVLALHGCGQTASAYVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDW---FFT-HHRA--RGTGEVESLHQLIDA 85 (212)
T ss_pred CCEEEEeCCCCCCHHHHhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCC---CCc-cccC--CCCccHHHHHHHHHH
Confidence 3557888988877655432112 56678888999999999999865321000 000 0000 011346778888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+++++..+..+++|+|+|+||.+++.++.++|+.+.++++.|++..
T Consensus 86 ~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 86 VKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 8888777767999999999999999999999999999887776653
No 44
>PRK10985 putative hydrolase; Provisional
Probab=99.38 E-value=4.6e-12 Score=113.62 Aligned_cols=110 Identities=20% Similarity=0.223 Sum_probs=78.1
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+..|+++||..++....+. ..+.+.+.+.|++|+++|+||||.|.... .+.+.. ...+|+..+++.
T Consensus 58 ~p~vll~HG~~g~~~~~~~--~~~~~~l~~~G~~v~~~d~rG~g~~~~~~-----------~~~~~~-~~~~D~~~~i~~ 123 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYA--HGLLEAAQKRGWLGVVMHFRGCSGEPNRL-----------HRIYHS-GETEDARFFLRW 123 (324)
T ss_pred CCEEEEeCCCCCCCcCHHH--HHHHHHHHHCCCEEEEEeCCCCCCCccCC-----------cceECC-CchHHHHHHHHH
Confidence 4678889998876543211 12334456779999999999999774210 011111 236888888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc--eeEEEEecCccc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHV--ALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~--v~g~i~sSap~~ 222 (246)
+++++. ..|++++||||||.+++.++.++++. +.++++.++|..
T Consensus 124 l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 124 LQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred HHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 887763 45899999999999999988887654 788888888864
No 45
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.35 E-value=6.3e-12 Score=108.72 Aligned_cols=129 Identities=18% Similarity=0.236 Sum_probs=85.4
Q ss_pred EEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEe-CCCCCCCccccchhHHHHHHHHcCCeEEEEccc
Q 025920 59 YYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADAIAPIFVYL-GAEEALDGDISVIGFLTDNAARFNALLVYIEHR 137 (246)
Q Consensus 59 ~~~q~lDhf~~~p~~~~tF~qry~~~~~~~~~g~~~~~~~PI~l~h-Gg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~R 137 (246)
||+.+.|--- +++..||+--+-.. ..+.+||++++ |+..+.-.|. -+-.++.....++++++|+|
T Consensus 46 yFdekedv~i--~~~~~t~n~Y~t~~---------~~t~gpil~l~HG~G~S~LSfA---~~a~el~s~~~~r~~a~DlR 111 (343)
T KOG2564|consen 46 YFDEKEDVSI--DGSDLTFNVYLTLP---------SATEGPILLLLHGGGSSALSFA---IFASELKSKIRCRCLALDLR 111 (343)
T ss_pred hhcccccccc--CCCcceEEEEEecC---------CCCCccEEEEeecCcccchhHH---HHHHHHHhhcceeEEEeecc
Confidence 6777766543 33344665322211 12457887776 4444444443 35567777778899999999
Q ss_pred cccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEE
Q 025920 138 YYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK--YPHVALGAL 215 (246)
Q Consensus 138 g~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~--yP~~v~g~i 215 (246)
|||+|.- ++-.-++.|..+.|+..+++.+-. ....+++|+||||||++|+..+.. -|. +.|++
T Consensus 112 gHGeTk~-----------~~e~dlS~eT~~KD~~~~i~~~fg---e~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~ 176 (343)
T KOG2564|consen 112 GHGETKV-----------ENEDDLSLETMSKDFGAVIKELFG---ELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLV 176 (343)
T ss_pred ccCcccc-----------CChhhcCHHHHHHHHHHHHHHHhc---cCCCceEEEeccccchhhhhhhhhhhchh-hhceE
Confidence 9999963 223347888999999888776543 234589999999999999987643 466 45554
Q ss_pred E
Q 025920 216 A 216 (246)
Q Consensus 216 ~ 216 (246)
.
T Consensus 177 v 177 (343)
T KOG2564|consen 177 V 177 (343)
T ss_pred E
Confidence 3
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.34 E-value=2.9e-11 Score=106.06 Aligned_cols=109 Identities=12% Similarity=0.054 Sum_probs=77.5
Q ss_pred CCcEEEEeCCCCCCC-ccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALD-GDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~-~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
+.+|+++|||.+... .+.... .+.+...+.|+.|+++|+||||+|.+. . .+.++..+|+.++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~-~la~~l~~~G~~v~~~Dl~G~G~S~~~-----------~---~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFV-LLARRLAEAGFPVLRFDYRGMGDSEGE-----------N---LGFEGIDADIAAAID 90 (274)
T ss_pred CCeEEEEeCCccccCCchhHHH-HHHHHHHHCCCEEEEeCCCCCCCCCCC-----------C---CCHHHHHHHHHHHHH
Confidence 467888998765432 222111 223334456899999999999998631 1 234577899999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
.++++.. ...+++++||||||.+++.++.. ++.++++|+.++++.
T Consensus 91 ~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 91 AFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 9987641 12369999999999999998765 467899999887654
No 47
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.32 E-value=1.1e-11 Score=111.99 Aligned_cols=102 Identities=17% Similarity=0.088 Sum_probs=75.9
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.+.||+++||..++...|.. ....+.. +++|+++|+||||.|.+.. ...+.++..+++..+++
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~---~~~~l~~--~~~v~~~d~~g~G~s~~~~------------~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLF---NHAALAA--GRPVIALDLPGHGASSKAV------------GAGSLDELAAAVLAFLD 192 (371)
T ss_pred CCCeEEEECCCCCccchHHH---HHHHHhc--CCEEEEEcCCCCCCCCCCC------------CCCCHHHHHHHHHHHHH
Confidence 35789999998888776542 2333333 4899999999999996421 12355666777766665
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
.+. ..+++++||||||.+++.++.++|+.+.++++.+++
T Consensus 193 ~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 193 ALG------IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred hcC------CccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 432 247999999999999999999999999999987654
No 48
>PRK07581 hypothetical protein; Validated
Probab=99.31 E-value=3.3e-12 Score=114.78 Aligned_cols=87 Identities=16% Similarity=0.162 Sum_probs=55.6
Q ss_pred cCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEecChHHHHHHHHHH
Q 025920 127 FNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSP-VIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 127 ~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p-~ilvG~S~GG~la~~~~~ 205 (246)
.+++||++|+||||.|.+..+.. ...++.-+......+|++.....+.+.++. .+ ++|+||||||++|+.++.
T Consensus 70 ~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~ 143 (339)
T PRK07581 70 EKYFIIIPNMFGNGLSSSPSNTP----APFNAARFPHVTIYDNVRAQHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAV 143 (339)
T ss_pred CceEEEEecCCCCCCCCCCCCCC----CCCCCCCCCceeHHHHHHHHHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHH
Confidence 46899999999999997432100 000111111112344554433333333433 36 479999999999999999
Q ss_pred HCCCceeEEEEecC
Q 025920 206 KYPHVALGALASSA 219 (246)
Q Consensus 206 ~yP~~v~g~i~sSa 219 (246)
+||+.|.++|+.++
T Consensus 144 ~~P~~V~~Lvli~~ 157 (339)
T PRK07581 144 RYPDMVERAAPIAG 157 (339)
T ss_pred HCHHHHhhheeeec
Confidence 99999999887654
No 49
>PRK10566 esterase; Provisional
Probab=99.31 E-value=2.9e-11 Score=103.52 Aligned_cols=109 Identities=18% Similarity=0.167 Sum_probs=74.1
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCC-C-CHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGY-F-NSAQAITDYAAIL 174 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~y-l-t~~q~l~D~~~~i 174 (246)
.+.|+++||+.++...+. .+.+...+.|+.|+++|+||||.|.+... ...... . ...+.++|+..++
T Consensus 27 ~p~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 95 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYS----YFAVALAQAGFRVIMPDAPMHGARFSGDE-------ARRLNHFWQILLQNMQEFPTLR 95 (249)
T ss_pred CCEEEEeCCCCcccchHH----HHHHHHHhCCCEEEEecCCcccccCCCcc-------ccchhhHHHHHHHHHHHHHHHH
Confidence 457888899877765432 34444456799999999999998743110 011110 0 1234567787788
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEE
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALA 216 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~ 216 (246)
+.+.++...+..+++++|||+||.++++++.++|+...+++.
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~ 137 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASL 137 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEe
Confidence 887765434556899999999999999999999986544443
No 50
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.27 E-value=8.9e-12 Score=112.83 Aligned_cols=119 Identities=17% Similarity=0.160 Sum_probs=76.0
Q ss_pred CCcEEEEeCCCCCCCc--ccc--chhHHHHHH------HHcCCeEEEEcccc--ccCCCCCCChhhhhcccccCCCCCHH
Q 025920 97 IAPIFVYLGAEEALDG--DIS--VIGFLTDNA------ARFNALLVYIEHRY--YGKSIPFGSREEALKNASTLGYFNSA 164 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~--~~~--~~~~~~~~a------~~~g~~Vi~~D~Rg--~G~S~p~~~~~~~~~~~~~~~ylt~~ 164 (246)
+.+|+|+||..++... +.. ..|++..+. ...++.|+++|+|| ||.|.|.........-..+...++.+
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 4689999998886522 110 112222221 13578999999999 67765421100000000011135677
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCC-EEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 165 QAITDYAAILLYIKEKYNARHSP-VIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 165 q~l~D~~~~i~~l~~~~~~~~~p-~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+..+|+..+++.++ . .+ ++++||||||++++.++.++|+.+.++|+.+++.
T Consensus 111 ~~~~~~~~~~~~l~----~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 111 DDVKAQKLLLDHLG----I--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHcC----C--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 88888877776553 2 25 9999999999999999999999999999876543
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.27 E-value=1.4e-11 Score=102.61 Aligned_cols=78 Identities=23% Similarity=0.340 Sum_probs=60.0
Q ss_pred CeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025920 129 ALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 129 ~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP 208 (246)
|.|+++|+||+|.|.|... .....++.++..+|+..+++.+. .+ +++++||||||++++.++.+||
T Consensus 1 f~vi~~d~rG~g~S~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~----~~--~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWD--------PDFPDYTTDDLAADLEALREALG----IK--KINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEEECTTSTTSSSCCG--------SGSCTHCHHHHHHHHHHHHHHHT----TS--SEEEEEETHHHHHHHHHHHHSG
T ss_pred CEEEEEeCCCCCCCCCCcc--------CCcccccHHHHHHHHHHHHHHhC----CC--CeEEEEECCChHHHHHHHHHCc
Confidence 4799999999999986100 12344556666666665555443 33 5999999999999999999999
Q ss_pred CceeEEEEecCc
Q 025920 209 HVALGALASSAP 220 (246)
Q Consensus 209 ~~v~g~i~sSap 220 (246)
+.|+++++.+++
T Consensus 67 ~~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 ERVKKLVLISPP 78 (230)
T ss_dssp GGEEEEEEESES
T ss_pred hhhcCcEEEeee
Confidence 999999998876
No 52
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.25 E-value=3.8e-11 Score=108.15 Aligned_cols=111 Identities=15% Similarity=0.165 Sum_probs=79.7
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.+.||+++||..+++..|.. .+..+.+..|..|+++|..|||.|++.+.. ..++ +.+....++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~---~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~----------~~y~----~~~~v~~i~ 119 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRR---VVPLLSKAKGLRVLAIDLPGHGYSSPLPRG----------PLYT----LRELVELIR 119 (326)
T ss_pred CCCcEEEeccccCCcccHhh---hccccccccceEEEEEecCCCCcCCCCCCC----------Ccee----hhHHHHHHH
Confidence 47899999999998877764 334455666789999999999977654321 1132 333333344
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEE---EecCcccccC
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGAL---ASSAPILYFD 225 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i---~sSap~~~~~ 225 (246)
.+..+.. ..|++++||||||++|..+++.||+.|++++ +..++....+
T Consensus 120 ~~~~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~ 170 (326)
T KOG1454|consen 120 RFVKEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTP 170 (326)
T ss_pred HHHHhhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCC
Confidence 4443332 3469999999999999999999999999999 6666665443
No 53
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.25 E-value=4.3e-11 Score=127.06 Aligned_cols=108 Identities=17% Similarity=0.115 Sum_probs=78.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||+.++...|. .++..+.. +++|+++|+||||.|....... ....-..++.++..+|+..+++.
T Consensus 1371 ~~~vVllHG~~~s~~~w~---~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~----~~~~~~~~si~~~a~~l~~ll~~ 1441 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWI---PIMKAISG--SARCISIDLPGHGGSKIQNHAK----ETQTEPTLSVELVADLLYKLIEH 1441 (1655)
T ss_pred CCeEEEECCCCCCHHHHH---HHHHHHhC--CCEEEEEcCCCCCCCCCccccc----cccccccCCHHHHHHHHHHHHHH
Confidence 568999999999887653 34444433 5899999999999996432100 00011234677777777777765
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
++ ..+++++||||||++++.++.++|+.+.++|+.++
T Consensus 1442 l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1442 IT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred hC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 43 23799999999999999999999999999987654
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=99.23 E-value=3e-11 Score=115.16 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=74.6
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||+|+||..++...|.. ++..+ ..++.|+++|+||||.|.+.. ....++.++..+|+..+++.
T Consensus 25 ~~~ivllHG~~~~~~~w~~---~~~~L--~~~~~Vi~~D~~G~G~S~~~~----------~~~~~~~~~~a~dl~~~i~~ 89 (582)
T PRK05855 25 RPTVVLVHGYPDNHEVWDG---VAPLL--ADRFRVVAYDVRGAGRSSAPK----------RTAAYTLARLADDFAAVIDA 89 (582)
T ss_pred CCeEEEEcCCCchHHHHHH---HHHHh--hcceEEEEecCCCCCCCCCCC----------cccccCHHHHHHHHHHHHHH
Confidence 5789999999887765532 33333 347899999999999997532 12245788899999999887
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLK--YPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~--yP~~v~g~i~sSap 220 (246)
++. ..|++++||||||+++..++.+ +|+.+..+++.++|
T Consensus 90 l~~-----~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 90 VSP-----DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred hCC-----CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 642 2469999999999999877665 34555555444444
No 55
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.22 E-value=1e-10 Score=108.60 Aligned_cols=108 Identities=17% Similarity=0.128 Sum_probs=74.2
Q ss_pred CCcEEEEeCCCCCCC-ccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALD-GDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~-~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
..|++++|||.++.. ..+ ..+.+...+.|+.|+++|.||+|.|.... .. ...... ...+++
T Consensus 193 ~~P~Vli~gG~~~~~~~~~---~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-----------~~-~d~~~~---~~avld 254 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYY---RLFRDYLAPRGIAMLTIDMPSVGFSSKWK-----------LT-QDSSLL---HQAVLN 254 (414)
T ss_pred CccEEEEeCCcccchhhhH---HHHHHHHHhCCCEEEEECCCCCCCCCCCC-----------cc-ccHHHH---HHHHHH
Confidence 468888888776542 222 12344445679999999999999996421 00 011111 124455
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
.+......+..++.++|+||||.+|+.++..+|+.++++|+.++++.
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 55544333456899999999999999999999999999999887763
No 56
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.21 E-value=1.2e-10 Score=97.86 Aligned_cols=109 Identities=16% Similarity=0.038 Sum_probs=89.1
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+..|+++||..|+..... .+.+..++.||.|.++..||||... +.+--.+.++.++|+..-.++
T Consensus 15 ~~AVLllHGFTGt~~Dvr----~Lgr~L~e~GyTv~aP~ypGHG~~~------------e~fl~t~~~DW~~~v~d~Y~~ 78 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVR----MLGRYLNENGYTVYAPRYPGHGTLP------------EDFLKTTPRDWWEDVEDGYRD 78 (243)
T ss_pred CEEEEEEeccCCCcHHHH----HHHHHHHHCCceEecCCCCCCCCCH------------HHHhcCCHHHHHHHHHHHHHH
Confidence 478999999999887653 5666677889999999999999763 222223667899999988888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFDD 226 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~~ 226 (246)
++++- ...+.++|-||||.+|++++..+| +++++..|||+....+
T Consensus 79 L~~~g---y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~ 123 (243)
T COG1647 79 LKEAG---YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSW 123 (243)
T ss_pred HHHcC---CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccc
Confidence 88542 246999999999999999999999 7899999999986654
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.16 E-value=3.3e-10 Score=102.65 Aligned_cols=109 Identities=13% Similarity=0.148 Sum_probs=78.7
Q ss_pred CCcEEEEeCCCCCCCcc--ccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHH-HHHHHH
Q 025920 97 IAPIFVYLGAEEALDGD--ISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAI-TDYAAI 173 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~--~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l-~D~~~~ 173 (246)
+.||+++||.......+ ..... +.+...+.|+.|+++|+||+|.|.. ..+.++.+ .|+.+.
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~-~~~~L~~~G~~V~~~D~~g~g~s~~---------------~~~~~d~~~~~~~~~ 125 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRS-LVRGLLERGQDVYLIDWGYPDRADR---------------YLTLDDYINGYIDKC 125 (350)
T ss_pred CCcEEEeccccccceeccCCCCch-HHHHHHHCCCeEEEEeCCCCCHHHh---------------cCCHHHHHHHHHHHH
Confidence 46888888753222111 11122 3444556799999999999998742 12444554 457788
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILY 223 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~ 223 (246)
++.++++.+ ..+++++||||||++++.++.++|+.+.++++.++|+..
T Consensus 126 v~~l~~~~~--~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 126 VDYICRTSK--LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHhC--CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 888887764 347999999999999999999999999999998888753
No 58
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.16 E-value=6.3e-10 Score=103.51 Aligned_cols=110 Identities=15% Similarity=0.005 Sum_probs=76.8
Q ss_pred CCcEEEEeCCCCCCCccccchhHHH-HHHHH-cCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLT-DNAAR-FNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAIL 174 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~-~~a~~-~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i 174 (246)
+.++|++||..++.. +..+...+. .+..+ .+++||++|+|++|.|..... . .++....+++++++
T Consensus 41 ~ptvIlIHG~~~s~~-~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a----------~--~~t~~vg~~la~lI 107 (442)
T TIGR03230 41 TKTFIVIHGWTVTGM-FESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS----------A--AYTKLVGKDVAKFV 107 (442)
T ss_pred CCeEEEECCCCcCCc-chhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc----------c--ccHHHHHHHHHHHH
Confidence 578999999876531 111112222 22222 268999999999998753211 1 12345667888889
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
+.+.+.++.+-.+++|+||||||.+|..++.++|+.|.++++..+
T Consensus 108 ~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDP 152 (442)
T TIGR03230 108 NWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDP 152 (442)
T ss_pred HHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcC
Confidence 888765554445899999999999999999999999998887654
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.15 E-value=3.1e-10 Score=88.58 Aligned_cols=93 Identities=17% Similarity=0.146 Sum_probs=67.3
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIK 178 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~ 178 (246)
|||++||+.++...+. .+.+...+.|+.|+.+|+|++|.+.. ..++.++++.+.
T Consensus 1 ~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~~~~~~~~~~~----------------------~~~~~~~~~~~~ 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ----PLAEALAEQGYAVVAFDYPGHGDSDG----------------------ADAVERVLADIR 54 (145)
T ss_dssp EEEEECTTTTTTHHHH----HHHHHHHHTTEEEEEESCTTSTTSHH----------------------SHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHH----HHHHHHHHCCCEEEEEecCCCCccch----------------------hHHHHHHHHHHH
Confidence 5899999988755432 33344445599999999999998831 113444444443
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 179 EKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 179 ~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
.+.. +..+++++|||+||.+++.++.++ ..++++|+.++
T Consensus 55 ~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 55 AGYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred hhcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 3222 346899999999999999999999 67789998776
No 60
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.13 E-value=2.5e-10 Score=104.63 Aligned_cols=119 Identities=17% Similarity=0.127 Sum_probs=76.2
Q ss_pred CCcEEEEeCCCCCCCcccc------chhHHHHHH------HHcCCeEEEEccccc-cCC-CCCCChhhhhcc-cccCCCC
Q 025920 97 IAPIFVYLGAEEALDGDIS------VIGFLTDNA------ARFNALLVYIEHRYY-GKS-IPFGSREEALKN-ASTLGYF 161 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~------~~~~~~~~a------~~~g~~Vi~~D~Rg~-G~S-~p~~~~~~~~~~-~~~~~yl 161 (246)
+.+|+++||..++...+.. ..|++..+. ...++.||++|+||+ |.| .|.......... .....-+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 4679999999988764221 011222221 134789999999983 444 332100000000 0011135
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 162 NSAQAITDYAAILLYIKEKYNARHSP-VIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 162 t~~q~l~D~~~~i~~l~~~~~~~~~p-~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+.++..+|+.++++.++. .+ ++++||||||++++.++.++|+.|.++|+.++..
T Consensus 128 ~~~~~~~~~~~~l~~l~~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI------TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CHHHHHHHHHHHHHHhCC------CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 788888888888877642 24 5899999999999999999999999999876543
No 61
>PRK13604 luxD acyl transferase; Provisional
Probab=99.13 E-value=3.1e-10 Score=100.91 Aligned_cols=103 Identities=10% Similarity=0.020 Sum_probs=72.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccc-cCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYY-GKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~-G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
...|++.||..+....+ ..+++...+.|+.|+.+|.||+ |+|.. +.+..+......|+...++
T Consensus 37 ~~~vIi~HGf~~~~~~~----~~~A~~La~~G~~vLrfD~rg~~GeS~G------------~~~~~t~s~g~~Dl~aaid 100 (307)
T PRK13604 37 NNTILIASGFARRMDHF----AGLAEYLSSNGFHVIRYDSLHHVGLSSG------------TIDEFTMSIGKNSLLTVVD 100 (307)
T ss_pred CCEEEEeCCCCCChHHH----HHHHHHHHHCCCEEEEecCCCCCCCCCC------------ccccCcccccHHHHHHHHH
Confidence 45678888877754321 2445555678999999999988 99953 1222233335799999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+++++. ..++.|+||||||++|...+.+.+ ++++|+.++.
T Consensus 101 ~lk~~~---~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~ 140 (307)
T PRK13604 101 WLNTRG---INNLGLIAASLSARIAYEVINEID--LSFLITAVGV 140 (307)
T ss_pred HHHhcC---CCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCc
Confidence 998752 347999999999999866665443 6777776544
No 62
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.12 E-value=4.9e-10 Score=98.66 Aligned_cols=109 Identities=12% Similarity=0.034 Sum_probs=76.4
Q ss_pred CCcEEEEeCCCCCCCccccchhHHH-HHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLT-DNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~-~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
+.++|++||..++....+ ...+. .+..+.+++|+++|.++++.+.... ...+.+...++++.+++
T Consensus 36 ~p~vilIHG~~~~~~~~~--~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~------------a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 36 RPTRFIIHGWTSSGEESW--ISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ------------AVNNTRVVGAELAKFLD 101 (275)
T ss_pred CCcEEEEcCCCCCCCCcH--HHHHHHHHHhcCCCEEEEEECccccccChHH------------HHHhHHHHHHHHHHHHH
Confidence 567899999888762221 11222 2344467999999999984332100 01133455678888888
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
.+.++.+.+..+++++||||||.+|..++.++|+.+.++++..+
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDP 145 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDP 145 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecC
Confidence 88776444445799999999999999999999999999888653
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.11 E-value=3.1e-10 Score=97.49 Aligned_cols=101 Identities=18% Similarity=0.296 Sum_probs=82.2
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
..+++.||+..+.. ++..++..+..+.+++|+.+|.+|||.|...... ....+|+.++.+.+
T Consensus 61 ~~lly~hGNa~Dlg---q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---------------~n~y~Di~avye~L 122 (258)
T KOG1552|consen 61 PTLLYSHGNAADLG---QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---------------RNLYADIKAVYEWL 122 (258)
T ss_pred eEEEEcCCcccchH---HHHHHHHHHhhcccceEEEEecccccccCCCccc---------------ccchhhHHHHHHHH
Confidence 45677778755554 3445677788888999999999999999754321 14689999999999
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
+++++ ++.+++|+|+|+|...+..++.++| +.|+|+-|+
T Consensus 123 r~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SP 161 (258)
T KOG1552|consen 123 RNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSP 161 (258)
T ss_pred HhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEecc
Confidence 99997 6679999999999999999999999 788888764
No 64
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.10 E-value=7.9e-10 Score=97.90 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=85.8
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
...|++++||--|+...|. .+-..+++..+..|+++|.|-||.|... .-.+.+.+.+|+..|++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~---sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-------------~~h~~~~ma~dv~~Fi~ 114 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWR---SVAKNLSRKLGRDVYAVDVRNHGSSPKI-------------TVHNYEAMAEDVKLFID 114 (315)
T ss_pred CCCceEEecccccCCCCHH---HHHHHhcccccCceEEEecccCCCCccc-------------cccCHHHHHHHHHHHHH
Confidence 4689999999999998764 3556778888999999999999998532 22345678899999999
Q ss_pred HHHHHcCCCCCCEEEEecChHH-HHHHHHHHHCCCceeEEEE-ecCcc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGG-MLATWFRLKYPHVALGALA-SSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG-~la~~~~~~yP~~v~g~i~-sSap~ 221 (246)
..+... ...|++++|||||| .+++....++|+.+..+|. -.+|.
T Consensus 115 ~v~~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 115 GVGGST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG 160 (315)
T ss_pred Hccccc--ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCc
Confidence 887543 24589999999999 8888888999999887765 45664
No 65
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.00 E-value=1.4e-09 Score=89.54 Aligned_cols=102 Identities=21% Similarity=0.179 Sum_probs=71.9
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHc-CCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARF-NALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~-g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.+|+++||+.++...+.. ....+.... .+.++++|+||||.|.+. ........+|+..+++.
T Consensus 22 ~~i~~~hg~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~g~g~s~~~--------------~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 22 PPLVLLHGFPGSSSVWRP---VFKVLPALAARYRVIAPDLRGHGRSDPA--------------GYSLSAYADDLAALLDA 84 (282)
T ss_pred CeEEEeCCCCCchhhhHH---HHHHhhccccceEEEEecccCCCCCCcc--------------cccHHHHHHHHHHHHHH
Confidence 489999999988776643 111122211 179999999999999610 01122236666666664
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
++ . .+++++||||||.++..++.++|+.+.++++.+++..
T Consensus 85 ~~----~--~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 85 LG----L--EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred hC----C--CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 43 2 2499999999999999999999999999998876643
No 66
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.00 E-value=2e-09 Score=103.39 Aligned_cols=85 Identities=13% Similarity=-0.015 Sum_probs=66.4
Q ss_pred HHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHH
Q 025920 123 NAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATW 202 (246)
Q Consensus 123 ~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~ 202 (246)
...+.|+.|+.+|+||+|.|.... ...+ .+..+|+..+++++.++.. .+.++.++|+||||.++..
T Consensus 48 ~l~~~Gy~vv~~D~RG~g~S~g~~------------~~~~-~~~~~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~ 113 (550)
T TIGR00976 48 WFVAQGYAVVIQDTRGRGASEGEF------------DLLG-SDEAADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLL 113 (550)
T ss_pred HHHhCCcEEEEEeccccccCCCce------------EecC-cccchHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHH
Confidence 344579999999999999997411 1112 3578899999999987632 2358999999999999999
Q ss_pred HHHHCCCceeEEEEecCcc
Q 025920 203 FRLKYPHVALGALASSAPI 221 (246)
Q Consensus 203 ~~~~yP~~v~g~i~sSap~ 221 (246)
++..+|+.+++++..++..
T Consensus 114 ~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 114 AAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HhccCCCceeEEeecCccc
Confidence 9999999999988765543
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.98 E-value=2.7e-08 Score=87.25 Aligned_cols=119 Identities=15% Similarity=0.068 Sum_probs=71.1
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEcc--ccccCCCCCCChhh----h-hcccc--cC-CCCCHH-HH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEH--RYYGKSIPFGSREE----A-LKNAS--TL-GYFNSA-QA 166 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~--Rg~G~S~p~~~~~~----~-~~~~~--~~-~ylt~~-q~ 166 (246)
+.|+++||..++...+.. ...+..++.+.|+.|+++|. ||+|.+.-...... + +-+.. .. ...+.+ ..
T Consensus 43 P~vvllHG~~~~~~~~~~-~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 43 PVLWYLSGLTCTHENFMI-KAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred CEEEEccCCCCCccHHHh-hhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 456777888777665532 23345677778999999997 66664431100000 0 00000 00 001111 22
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 167 ITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 167 l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
++|+..+ +.+++..+..+++++|+||||.+|+.++.++|+.+.++++.++.
T Consensus 122 ~~~l~~~---~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 122 VQELPAL---VAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHH---HHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 3343333 33444445568999999999999999999999999988877654
No 68
>PLN02872 triacylglycerol lipase
Probab=98.97 E-value=1e-09 Score=101.38 Aligned_cols=116 Identities=18% Similarity=0.067 Sum_probs=75.1
Q ss_pred CCcEEEEeCCCCCCCccccch--hHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHH-HHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVI--GFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQ-AITDYAAI 173 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~--~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q-~l~D~~~~ 173 (246)
+.||+++||..++...|..+. ..+.....+.|+.|+++|.||+|.|..-...+ -.+.+-+. ++.++ +..|+.++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~--~~~~~fw~-~s~~e~a~~Dl~a~ 150 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLS--EKDKEFWD-WSWQELALYDLAEM 150 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCC--ccchhccC-CcHHHHHHHHHHHH
Confidence 578999999887777654221 12333345679999999999998764311110 00001112 34444 45899999
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEecC
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH---VALGALASSA 219 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~---~v~g~i~sSa 219 (246)
++++.+.. ..+++++|||+||+++..+ ..+|+ .++.+++.++
T Consensus 151 id~i~~~~---~~~v~~VGhS~Gg~~~~~~-~~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 151 IHYVYSIT---NSKIFIVGHSQGTIMSLAA-LTQPNVVEMVEAAALLCP 195 (395)
T ss_pred HHHHHhcc---CCceEEEEECHHHHHHHHH-hhChHHHHHHHHHHHhcc
Confidence 99987542 3589999999999999844 46787 4556665543
No 69
>PRK11071 esterase YqiA; Provisional
Probab=98.95 E-value=3e-09 Score=88.62 Aligned_cols=91 Identities=18% Similarity=0.247 Sum_probs=63.0
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHH--cCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAAR--FNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~--~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.||+++||..++...+.. ..+.+...+ .++.|+++|+||||. ++.+++.++++
T Consensus 2 p~illlHGf~ss~~~~~~--~~~~~~l~~~~~~~~v~~~dl~g~~~-----------------------~~~~~l~~l~~ 56 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKA--TLLKNWLAQHHPDIEMIVPQLPPYPA-----------------------DAAELLESLVL 56 (190)
T ss_pred CeEEEECCCCCCcchHHH--HHHHHHHHHhCCCCeEEeCCCCCCHH-----------------------HHHHHHHHHHH
Confidence 369999999998877542 123333333 368999999999851 24455555554
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
. +. ..+++++|+||||.+++.++.++|.. +|+.++++.
T Consensus 57 ~----~~--~~~~~lvG~S~Gg~~a~~~a~~~~~~---~vl~~~~~~ 94 (190)
T PRK11071 57 E----HG--GDPLGLVGSSLGGYYATWLSQCFMLP---AVVVNPAVR 94 (190)
T ss_pred H----cC--CCCeEEEEECHHHHHHHHHHHHcCCC---EEEECCCCC
Confidence 4 22 24799999999999999999999942 355555543
No 70
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.92 E-value=6.6e-09 Score=102.43 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=71.5
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhh--cccccCCCC----------CHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEAL--KNASTLGYF----------NSAQA 166 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~--~~~~~~~yl----------t~~q~ 166 (246)
+|+++||..++.+.|. .+.+...+.|+.|+++||||||+|..-.... .. .......|+ +.+|.
T Consensus 451 ~VVllHG~~g~~~~~~----~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~-~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 451 VVIYQHGITGAKENAL----AFAGTLAAAGVATIAIDHPLHGARSFDANAS-GVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred EEEEeCCCCCCHHHHH----HHHHHHHhCCcEEEEeCCCCCCccccccccc-cccccccCccceeccccccccccCHHHH
Confidence 6888899888877654 2233333468999999999999995421100 00 001123342 46899
Q ss_pred HHHHHHHHHHHH------HHc----CCCCCCEEEEecChHHHHHHHHHHHCC
Q 025920 167 ITDYAAILLYIK------EKY----NARHSPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 167 l~D~~~~i~~l~------~~~----~~~~~p~ilvG~S~GG~la~~~~~~yP 208 (246)
+.|+..++..++ .++ ..+..|++++||||||+++..+.....
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 999999999887 221 134579999999999999999987533
No 71
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.90 E-value=1.3e-09 Score=91.51 Aligned_cols=105 Identities=15% Similarity=0.205 Sum_probs=79.7
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
....++.+|++.|+..-+.... .-.-.+++.+|+.+|.||||+|...++. . -..-|....++
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~---~~fy~~l~mnv~ivsYRGYG~S~GspsE---------~------GL~lDs~avld 138 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIA---RVFYVNLKMNVLIVSYRGYGKSEGSPSE---------E------GLKLDSEAVLD 138 (300)
T ss_pred CCceEEEEccCCCcccchhhHH---HHHHHHcCceEEEEEeeccccCCCCccc---------c------ceeccHHHHHH
Confidence 4567888899999886554322 2234577899999999999999764321 1 12345566677
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASS 218 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sS 218 (246)
++..+...++.+++|+|.|.||++|...+++.-+++.++|+..
T Consensus 139 yl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivEN 181 (300)
T KOG4391|consen 139 YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVEN 181 (300)
T ss_pred HHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeec
Confidence 8877766678899999999999999999999999999988643
No 72
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.87 E-value=2.8e-08 Score=85.07 Aligned_cols=133 Identities=16% Similarity=0.120 Sum_probs=76.1
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHH----HHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDN----AARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYA 171 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~----a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~ 171 (246)
.+.||+|+||..|+...+........+. .....+.++++|........- + . +..+..+-+.
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-g------------~--~l~~q~~~~~ 67 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-G------------R--TLQRQAEFLA 67 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-c------------c--cHHHHHHHHH
Confidence 3689999999888766443211111110 112246677877654321110 0 0 1112223333
Q ss_pred HHHHHHHHHc---CCCCCCEEEEecChHHHHHHHHHHHCC---CceeEEEEecCcccccCCC--CChhhHHHHHHHHHhh
Q 025920 172 AILLYIKEKY---NARHSPVIVVGGSYGGMLATWFRLKYP---HVALGALASSAPILYFDDI--TPQNGYYSIVTRDFRV 243 (246)
Q Consensus 172 ~~i~~l~~~~---~~~~~p~ilvG~S~GG~la~~~~~~yP---~~v~g~i~sSap~~~~~~~--~~~~~~~~~v~~~~~~ 243 (246)
+.++.+.+.+ ..+..+++++||||||.+|..+....+ +.|.++|..++|+....-. .....+|+.+.+..++
T Consensus 68 ~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~~~~d~~~~~~y~~~~~~~~~ 147 (225)
T PF07819_consen 68 EAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSPLAFDRSLDRFYKRLNNFWRK 147 (225)
T ss_pred HHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCccccchHHHHHHHHHHHHHHHH
Confidence 3444444433 234568999999999999988876544 4789999999998755411 1245566666555544
No 73
>PLN00021 chlorophyllase
Probab=98.84 E-value=3.5e-08 Score=88.48 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=63.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
..+|+++||+.+....+. .....++ +.|+.|+++|+++++.+... ..+.|..+++++
T Consensus 52 ~PvVv~lHG~~~~~~~y~---~l~~~La-s~G~~VvapD~~g~~~~~~~-------------------~~i~d~~~~~~~ 108 (313)
T PLN00021 52 YPVLLFLHGYLLYNSFYS---QLLQHIA-SHGFIVVAPQLYTLAGPDGT-------------------DEIKDAAAVINW 108 (313)
T ss_pred CCEEEEECCCCCCcccHH---HHHHHHH-hCCCEEEEecCCCcCCCCch-------------------hhHHHHHHHHHH
Confidence 355788888877654432 2344444 56999999999986532110 112333333343
Q ss_pred HHHH--------cCCCCCCEEEEecChHHHHHHHHHHHCCC-----ceeEEEEecC
Q 025920 177 IKEK--------YNARHSPVIVVGGSYGGMLATWFRLKYPH-----VALGALASSA 219 (246)
Q Consensus 177 l~~~--------~~~~~~p~ilvG~S~GG~la~~~~~~yP~-----~v~g~i~sSa 219 (246)
+.+. ...+..+++++||||||.+|+.++.++|+ .+.++|+.++
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 3322 11223579999999999999999999986 4567776653
No 74
>PRK11460 putative hydrolase; Provisional
Probab=98.82 E-value=6.7e-08 Score=82.89 Aligned_cols=118 Identities=13% Similarity=-0.008 Sum_probs=70.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcc----cccCCCCCHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKN----ASTLGYFNSAQAITDYAA 172 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~----~~~~~ylt~~q~l~D~~~ 172 (246)
...||++||..++...+.. ....++.. +..+.++..||+..+...... ++-+ .+....-..++.++++.+
T Consensus 16 ~~~vIlLHG~G~~~~~~~~---l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~--~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGE---IGSWFAPA-FPDALVVSVGGPEPSGNGAGR--QWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CcEEEEEeCCCCChHHHHH---HHHHHHHH-CCCCEEECCCCCCCcCCCCCc--ccccCCCCCccchHHHHHHHHHHHHH
Confidence 4668999999888776542 33333333 334445555555432211000 0000 000000122344555666
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 173 ILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 173 ~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+++.+..+++.+..+++++|+|+||.+++.++.++|+.+.++++.|+.
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 667777676666668999999999999999999999988877766644
No 75
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.81 E-value=3.1e-08 Score=84.49 Aligned_cols=115 Identities=23% Similarity=0.226 Sum_probs=78.4
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
+-||++||..++.+.+.... -+.++|.+.|+.|+.+|...-.... ...+ -+ ....... ......++.+++++
T Consensus 17 PLVv~LHG~~~~a~~~~~~s-~~~~lAd~~GfivvyP~~~~~~~~~--~cw~-w~---~~~~~~g-~~d~~~i~~lv~~v 88 (220)
T PF10503_consen 17 PLVVVLHGCGQSAEDFAAGS-GWNALADREGFIVVYPEQSRRANPQ--GCWN-WF---SDDQQRG-GGDVAFIAALVDYV 88 (220)
T ss_pred CEEEEeCCCCCCHHHHHhhc-CHHHHhhcCCeEEEcccccccCCCC--Cccc-cc---ccccccC-ccchhhHHHHHHhH
Confidence 34577888888777665443 3567899999999999975322111 1100 00 0000001 11244566778889
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
..++.++..+|++.|.|.||+++..++..|||.+.++...|++
T Consensus 89 ~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 89 AARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred hhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 8899998899999999999999999999999999876655544
No 76
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.81 E-value=3.7e-08 Score=87.52 Aligned_cols=109 Identities=23% Similarity=0.263 Sum_probs=79.1
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.-|+++||-+|+..+-+ ...+.+.+.+.|+.|++++.||+|.+--.. . ..++. -..+|++.+++.+
T Consensus 76 P~vVl~HGL~G~s~s~y--~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~----------p-~~yh~-G~t~D~~~~l~~l 141 (345)
T COG0429 76 PLVVLFHGLEGSSNSPY--ARGLMRALSRRGWLVVVFHFRGCSGEANTS----------P-RLYHS-GETEDIRFFLDWL 141 (345)
T ss_pred ceEEEEeccCCCCcCHH--HHHHHHHHHhcCCeEEEEecccccCCcccC----------c-ceecc-cchhHHHHHHHHH
Confidence 46788999999887643 234556677789999999999999874211 1 11111 1239999999999
Q ss_pred HHHcCCCCCCEEEEecChHH-HHHHHHHHHCCC-ceeEEEEecCccc
Q 025920 178 KEKYNARHSPVIVVGGSYGG-MLATWFRLKYPH-VALGALASSAPIL 222 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG-~la~~~~~~yP~-~v~g~i~sSap~~ 222 (246)
+... ...|...+|.|+|| +|+.++..+--+ .+.++++.|+|..
T Consensus 142 ~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 142 KARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred HHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 9876 35689999999999 777777665433 3578888899864
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=98.77 E-value=8.8e-08 Score=84.53 Aligned_cols=121 Identities=17% Similarity=0.041 Sum_probs=71.3
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCC-------hhhhhccc--ccCC-CCCHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGS-------REEALKNA--STLG-YFNSAQAI 167 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~-------~~~~~~~~--~~~~-ylt~~q~l 167 (246)
+.|+++||+.++...+... .-+.+++...|+.|+.+|..++|.-.+... ...-+.+. ..++ +-..+..+
T Consensus 48 Pvv~~lHG~~~~~~~~~~~-~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 48 PVLYWLSGLTCTDENFIQK-SGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CEEEEecCCCcChHHHHHh-hhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 3456678877766544322 223455667799999999887762111000 00000000 0100 00112344
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 168 TDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 168 ~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+++...++...... +..+++++|+||||.+|++++.++|+.+.++++.|+..
T Consensus 127 ~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 127 KELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 55555555543333 33579999999999999999999999999888877654
No 78
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.73 E-value=2e-08 Score=72.03 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=49.9
Q ss_pred cccCCCCCCC-CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCC-CH
Q 025920 86 KYWGGGAGAD-AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYF-NS 163 (246)
Q Consensus 86 ~~~~~g~~~~-~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~yl-t~ 163 (246)
+.|.+ ++ +++.|+++||..+.+..+.. +++...+.|+.|+++||||||+|.. ...+. +.
T Consensus 7 ~~w~p---~~~~k~~v~i~HG~~eh~~ry~~----~a~~L~~~G~~V~~~D~rGhG~S~g------------~rg~~~~~ 67 (79)
T PF12146_consen 7 RRWKP---ENPPKAVVVIVHGFGEHSGRYAH----LAEFLAEQGYAVFAYDHRGHGRSEG------------KRGHIDSF 67 (79)
T ss_pred EEecC---CCCCCEEEEEeCCcHHHHHHHHH----HHHHHHhCCCEEEEECCCcCCCCCC------------cccccCCH
Confidence 34665 33 36788889998777766542 3344456899999999999999974 12222 56
Q ss_pred HHHHHHHHHHHH
Q 025920 164 AQAITDYAAILL 175 (246)
Q Consensus 164 ~q~l~D~~~~i~ 175 (246)
++.++|+..+++
T Consensus 68 ~~~v~D~~~~~~ 79 (79)
T PF12146_consen 68 DDYVDDLHQFIQ 79 (79)
T ss_pred HHHHHHHHHHhC
Confidence 788999988763
No 79
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.73 E-value=1.1e-07 Score=90.66 Aligned_cols=108 Identities=12% Similarity=-0.041 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCCCCcccc--chhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHH-HHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDIS--VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQA-ITDYAAI 173 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~--~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~-l~D~~~~ 173 (246)
+.||+++||.-.....+.. ..+++ +...+.|+.|+++|+|++|.|...- +.++. .+++.+.
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv-~~L~~qGf~V~~iDwrgpg~s~~~~---------------~~ddY~~~~i~~a 251 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLV-RWLVEQGHTVFVISWRNPDASQADK---------------TFDDYIRDGVIAA 251 (532)
T ss_pred CCcEEEECcccccceeeecccchHHH-HHHHHCCcEEEEEECCCCCcccccC---------------ChhhhHHHHHHHH
Confidence 5899999986544333211 12344 4445579999999999999885311 12223 3446666
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHH----HHHHHHC-CCceeEEEEecCccc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLA----TWFRLKY-PHVALGALASSAPIL 222 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la----~~~~~~y-P~~v~g~i~sSap~~ 222 (246)
++.+++..+ ..+++++||||||.++ +.++... |+.+.++++.++|+.
T Consensus 252 l~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 252 LEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred HHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 777766553 3479999999999985 2355555 888999998888864
No 80
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.72 E-value=1.2e-07 Score=86.84 Aligned_cols=110 Identities=22% Similarity=0.250 Sum_probs=82.3
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
..|+++||..|++... ....+...|.+.|++++.+.+||.|.|.-..+ +.++. -..+|+.++++++
T Consensus 126 P~vvilpGltg~S~~~--YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp-----------r~f~a-g~t~Dl~~~v~~i 191 (409)
T KOG1838|consen 126 PIVVILPGLTGGSHES--YVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP-----------RLFTA-GWTEDLREVVNHI 191 (409)
T ss_pred cEEEEecCCCCCChhH--HHHHHHHHHHhCCcEEEEECCCCCCCCccCCC-----------ceeec-CCHHHHHHHHHHH
Confidence 3456666877776553 23456677889999999999999998853221 11211 2368999999999
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecCcccc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPH--VALGALASSAPILY 223 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~--~v~g~i~sSap~~~ 223 (246)
++++ ++.|...+|.||||++...|..+--+ .+.++++.+.|...
T Consensus 192 ~~~~--P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 192 KKRY--PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred HHhC--CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 9988 57799999999999999999877544 35788888888764
No 81
>PRK10162 acetyl esterase; Provisional
Probab=98.72 E-value=1.9e-07 Score=83.72 Aligned_cols=105 Identities=22% Similarity=0.157 Sum_probs=68.7
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
..|+++|||................++.+.|+.|+.+|+|.-.+. +++ ..++|+...++++
T Consensus 82 p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-~~p------------------~~~~D~~~a~~~l 142 (318)
T PRK10162 82 ATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-RFP------------------QAIEEIVAVCCYF 142 (318)
T ss_pred CEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-CCC------------------CcHHHHHHHHHHH
Confidence 457778887744332211223556677778999999999954322 111 2456666666665
Q ss_pred HH---HcCCCCCCEEEEecChHHHHHHHHHHHC------CCceeEEEEecCcc
Q 025920 178 KE---KYNARHSPVIVVGGSYGGMLATWFRLKY------PHVALGALASSAPI 221 (246)
Q Consensus 178 ~~---~~~~~~~p~ilvG~S~GG~la~~~~~~y------P~~v~g~i~sSap~ 221 (246)
.+ +++.+..+++++|+|+||.+|+.++.+. |..+.++++.++..
T Consensus 143 ~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 143 HQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 43 4555556899999999999999988754 34677777766543
No 82
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.72 E-value=2.8e-08 Score=83.39 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=67.8
Q ss_pred HHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHH
Q 025920 121 TDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLA 200 (246)
Q Consensus 121 ~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la 200 (246)
..+..+.|+.|+.+|.||.+.... .+.. ....-.-...++|+.+.++.+.++...+..++.++|+|+||.++
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g~g~------~~~~--~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGGYGK------DFHE--AGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSSSHH------HHHH--TTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred HHHHHhCCEEEEEEcCCCCCccch------hHHH--hhhccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 344567899999999999874321 0100 01111223678999999999988776666799999999999999
Q ss_pred HHHHHHCCCceeEEEEecCccc
Q 025920 201 TWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 201 ~~~~~~yP~~v~g~i~sSap~~ 222 (246)
++++.++|+.++++++.+++..
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~d 100 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVSD 100 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-SS
T ss_pred chhhcccceeeeeeeccceecc
Confidence 9999999999999888775543
No 83
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.67 E-value=9.1e-08 Score=79.85 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=71.8
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHH
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKE 179 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~ 179 (246)
||++|||............+...++.+.|+.|+.+|+|=.-+. +..+.++|+.+.++++.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-------------------~~p~~~~D~~~a~~~l~~ 61 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-------------------PFPAALEDVKAAYRWLLK 61 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-------------------STTHHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-------------------cccccccccccceeeecc
Confidence 6899998876544333344666778878999999999953221 123788999988888887
Q ss_pred H---cCCCCCCEEEEecChHHHHHHHHHHHCCC----ceeEEEEecCcc
Q 025920 180 K---YNARHSPVIVVGGSYGGMLATWFRLKYPH----VALGALASSAPI 221 (246)
Q Consensus 180 ~---~~~~~~p~ilvG~S~GG~la~~~~~~yP~----~v~g~i~sSap~ 221 (246)
+ ++.+..+++++|+|-||.||+.++.+..+ .+.++++.++..
T Consensus 62 ~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 62 NADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp THHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 6 33445689999999999999998875443 378888887643
No 84
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.61 E-value=6.1e-08 Score=94.46 Aligned_cols=112 Identities=19% Similarity=0.133 Sum_probs=73.3
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEcccc---ccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRY---YGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg---~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
-|+++|||+.....+. .. ...+.....|+.|+.++.|| ||+.-... ....++. ..++|+.+.++
T Consensus 396 ~i~~~hGGP~~~~~~~-~~-~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~-------~~~~~g~----~~~~D~~~~~~ 462 (620)
T COG1506 396 LIVYIHGGPSAQVGYS-FN-PEIQVLASAGYAVLAPNYRGSTGYGREFADA-------IRGDWGG----VDLEDLIAAVD 462 (620)
T ss_pred EEEEeCCCCccccccc-cc-hhhHHHhcCCeEEEEeCCCCCCccHHHHHHh-------hhhccCC----ccHHHHHHHHH
Confidence 3567789986554421 11 22334456799999999995 44332100 0011221 35677777777
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
.+.+...++..++.++||||||.++++.+.+.| .++++++..+++...
T Consensus 463 ~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~ 510 (620)
T COG1506 463 ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWL 510 (620)
T ss_pred HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhh
Confidence 665554456668999999999999999999999 678888776655433
No 85
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.58 E-value=5.3e-07 Score=92.32 Aligned_cols=110 Identities=15% Similarity=0.026 Sum_probs=74.3
Q ss_pred CCCcEEEEeCCCCCCCccccc--hhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISV--IGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAI 173 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~--~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~ 173 (246)
.+.||+++||.......|... ..++ ....+.|+.|+++| +|.|.+.. .....+.++.+.++.+.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v-~~L~~~g~~v~~~d---~G~~~~~~----------~~~~~~l~~~i~~l~~~ 131 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAV-GILHRAGLDPWVID---FGSPDKVE----------GGMERNLADHVVALSEA 131 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHH-HHHHHCCCEEEEEc---CCCCChhH----------cCccCCHHHHHHHHHHH
Confidence 357999999988777665432 1123 33445689999999 57665411 11123555556566666
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC-CCceeEEEEecCccc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKY-PHVALGALASSAPIL 222 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~y-P~~v~g~i~sSap~~ 222 (246)
++.+++.- ..+++++||||||++++.+++.+ |+.|.++++.++|+.
T Consensus 132 l~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 132 IDTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred HHHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 66554332 23799999999999999988755 568999998888864
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.57 E-value=3.4e-07 Score=77.25 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=66.7
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
+|||++|++.|+...|.. +...+... ...|+.++.+|.+...+. ..+.++.++++.+.|+
T Consensus 1 ~~lf~~p~~gG~~~~y~~---la~~l~~~-~~~v~~i~~~~~~~~~~~--------------~~si~~la~~y~~~I~-- 60 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRP---LARALPDD-VIGVYGIEYPGRGDDEPP--------------PDSIEELASRYAEAIR-- 60 (229)
T ss_dssp -EEEEESSTTCSGGGGHH---HHHHHTTT-EEEEEEECSTTSCTTSHE--------------ESSHHHHHHHHHHHHH--
T ss_pred CeEEEEcCCccCHHHHHH---HHHhCCCC-eEEEEEEecCCCCCCCCC--------------CCCHHHHHHHHHHHhh--
Confidence 479999999998876642 22222222 356999999999844321 1356677777654444
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHH---CCCceeEEEEecCcc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLK---YPHVALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~---yP~~v~g~i~sSap~ 221 (246)
... ++.|++|+|||+||.+|..++.+ ....+..++++.++.
T Consensus 61 -~~~--~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 61 -ARQ--PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp -HHT--SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred -hhC--CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 332 23499999999999999998754 345577787766543
No 87
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.57 E-value=2.4e-06 Score=74.69 Aligned_cols=104 Identities=13% Similarity=0.196 Sum_probs=75.9
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.+.|+-+||.+|+-..|. ++.....+.|.++|.+..||+|.+.... ...|-+. +-..+...
T Consensus 35 ~gTVv~~hGsPGSH~DFk----Yi~~~l~~~~iR~I~iN~PGf~~t~~~~----------~~~~~n~-----er~~~~~~ 95 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFK----YIRPPLDEAGIRFIGINYPGFGFTPGYP----------DQQYTNE-----ERQNFVNA 95 (297)
T ss_pred ceeEEEecCCCCCccchh----hhhhHHHHcCeEEEEeCCCCCCCCCCCc----------ccccChH-----HHHHHHHH
Confidence 456888999999988874 6666677889999999999999987532 3333332 22244444
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+-++++.. .+++.+|||.|+-.|+.++...| +.|+++.++|=+
T Consensus 96 ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 96 LLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred HHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 44455544 48999999999999999999997 457776665533
No 88
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.56 E-value=1e-06 Score=77.30 Aligned_cols=119 Identities=14% Similarity=0.064 Sum_probs=89.3
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHH--cCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAAR--FNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~--~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
-|+++-|++|-.+-|. .|+..+... -++.|+++.|.||-.+...... ..+.+.++.++.++-..++++.
T Consensus 4 li~~IPGNPGlv~fY~---~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~------~~~~~~~sL~~QI~hk~~~i~~ 74 (266)
T PF10230_consen 4 LIVFIPGNPGLVEFYE---EFLSALYEKLNPQFEILGISHAGHSTSPSNSKF------SPNGRLFSLQDQIEHKIDFIKE 74 (266)
T ss_pred EEEEECCCCChHHHHH---HHHHHHHHhCCCCCeeEEecCCCCcCCcccccc------cCCCCccCHHHHHHHHHHHHHH
Confidence 3566779999887654 466666665 3788999999999877643110 1245677888888888888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCC---CceeEEEEecCcccccCC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYP---HVALGALASSAPILYFDD 226 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP---~~v~g~i~sSap~~~~~~ 226 (246)
+..+...++.+++++|||.|+.+++.+..+.| ..|.++++.=+-+....+
T Consensus 75 ~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~ 127 (266)
T PF10230_consen 75 LIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAK 127 (266)
T ss_pred HhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccC
Confidence 87754334679999999999999999999999 677888877665554443
No 89
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.46 E-value=5.4e-06 Score=72.80 Aligned_cols=116 Identities=18% Similarity=0.225 Sum_probs=79.4
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.-||++||..++........+ |..+|.+.|+.|+++| ++.++-+....-+.+...+..+ -.+-+.++.++++.+
T Consensus 62 pLvv~LHG~~~sgag~~~~sg-~d~lAd~~gFlV~yPd--g~~~~wn~~~~~~~~~p~~~~~---g~ddVgflr~lva~l 135 (312)
T COG3509 62 PLVVVLHGSGGSGAGQLHGTG-WDALADREGFLVAYPD--GYDRAWNANGCGNWFGPADRRR---GVDDVGFLRALVAKL 135 (312)
T ss_pred CEEEEEecCCCChHHhhcccc-hhhhhcccCcEEECcC--ccccccCCCcccccCCcccccC---CccHHHHHHHHHHHH
Confidence 356778898888877665444 5678999999999994 2333321100000000000011 114567888999999
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
..+++++..+|++.|-|-||.++.+++..+|+++.++-..++
T Consensus 136 ~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg 177 (312)
T COG3509 136 VNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAG 177 (312)
T ss_pred HHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeec
Confidence 999999888999999999999999999999999876543333
No 90
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.46 E-value=3.4e-07 Score=84.46 Aligned_cols=86 Identities=15% Similarity=0.177 Sum_probs=57.7
Q ss_pred CCeEEEEccccccCCC-CC-CChhhhhccc---c----cCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCE-EEEecChHH
Q 025920 128 NALLVYIEHRYYGKSI-PF-GSREEALKNA---S----TLGYFNSAQAITDYAAILLYIKEKYNARHSPV-IVVGGSYGG 197 (246)
Q Consensus 128 g~~Vi~~D~Rg~G~S~-p~-~~~~~~~~~~---~----~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~-ilvG~S~GG 197 (246)
.+-||++|..|=|.|+ |. +....+..++ . +..-++.++.++|+..++++++ .+ ++ +++||||||
T Consensus 99 ~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lg----i~--~~~~vvG~SmGG 172 (389)
T PRK06765 99 KYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLG----IA--RLHAVMGPSMGG 172 (389)
T ss_pred ceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcC----CC--CceEEEEECHHH
Confidence 5789999999876532 20 1000000011 1 1223577888888877776543 22 46 499999999
Q ss_pred HHHHHHHHHCCCceeEEEEecC
Q 025920 198 MLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 198 ~la~~~~~~yP~~v~g~i~sSa 219 (246)
++|+.++.+||+.|.++|+.++
T Consensus 173 ~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 173 MQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred HHHHHHHHHChHhhheEEEEec
Confidence 9999999999999999987643
No 91
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.42 E-value=1.8e-07 Score=77.99 Aligned_cols=106 Identities=20% Similarity=0.164 Sum_probs=72.9
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
..|+++.|.-|+.+..+. ..+..+-+.....|+++|.||||.|.|.... +..+-..+|....++-+
T Consensus 43 ~~iLlipGalGs~~tDf~--pql~~l~k~l~~TivawDPpGYG~SrPP~Rk------------f~~~ff~~Da~~avdLM 108 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFP--PQLLSLFKPLQVTIVAWDPPGYGTSRPPERK------------FEVQFFMKDAEYAVDLM 108 (277)
T ss_pred ceeEecccccccccccCC--HHHHhcCCCCceEEEEECCCCCCCCCCCccc------------chHHHHHHhHHHHHHHH
Confidence 568888898888765432 3444444444578999999999999985421 22333444444333322
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+ .+ +-.|+.++|+|=||..|+..+.|+++.|..+++.+|.
T Consensus 109 ~-aL--k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ 148 (277)
T KOG2984|consen 109 E-AL--KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAA 148 (277)
T ss_pred H-Hh--CCCCeeEeeecCCCeEEEEeeccChhhhhhheeeccc
Confidence 2 12 1348999999999999999999999999888776554
No 92
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.42 E-value=2e-06 Score=77.04 Aligned_cols=98 Identities=18% Similarity=0.179 Sum_probs=74.3
Q ss_pred CCCcEEEEeCCCCCCCcccc---chhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDIS---VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAA 172 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~---~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~ 172 (246)
+++-|++..|+.+.-+.... ....+.+++++.+++|+.+..||.|.|... .+.++.+.|...
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~---------------~s~~dLv~~~~a 200 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP---------------PSRKDLVKDYQA 200 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC---------------CCHHHHHHHHHH
Confidence 45667777787776655211 123677889999999999999999999642 245689999999
Q ss_pred HHHHHHHHc-CCCCCCEEEEecChHHHHHHHHHHHCC
Q 025920 173 ILLYIKEKY-NARHSPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 173 ~i~~l~~~~-~~~~~p~ilvG~S~GG~la~~~~~~yP 208 (246)
.+++++++. ++....+++.|||+||.+++....+..
T Consensus 201 ~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 201 CVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 999998644 334457999999999999998766553
No 93
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.38 E-value=7.7e-07 Score=81.91 Aligned_cols=111 Identities=22% Similarity=0.231 Sum_probs=68.4
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
..|++++.||..+...... ..+.+.+...|..++++|.||.|.|...+ + +-. .+.... .++++
T Consensus 189 p~P~VIv~gGlDs~qeD~~--~l~~~~l~~rGiA~LtvDmPG~G~s~~~~-l--------~~D---~~~l~~---aVLd~ 251 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDLY--RLFRDYLAPRGIAMLTVDMPGQGESPKWP-L--------TQD---SSRLHQ---AVLDY 251 (411)
T ss_dssp -EEEEEEE--TTS-GGGGH--HHHHCCCHHCT-EEEEE--TTSGGGTTT--S---------S----CCHHHH---HHHHH
T ss_pred CCCEEEEeCCcchhHHHHH--HHHHHHHHhCCCEEEEEccCCCcccccCC-C--------CcC---HHHHHH---HHHHH
Confidence 5799999999887764321 23344445689999999999999985321 1 001 112222 33455
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
+....-.+..++.++|-|+||.+|..++...+++++++|..+|++..+
T Consensus 252 L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 252 LASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF 299 (411)
T ss_dssp HHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG
T ss_pred HhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh
Confidence 554433455689999999999999999999999999999999986544
No 94
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.34 E-value=1.7e-06 Score=75.68 Aligned_cols=88 Identities=18% Similarity=0.036 Sum_probs=64.7
Q ss_pred HHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHH
Q 025920 124 AARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWF 203 (246)
Q Consensus 124 a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~ 203 (246)
..+.||.||..|.||+|.|...- ... .++-.+|..+.|+++..+ ...+.+|-++|.||+|+.+...
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~------------~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~ 118 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEF------------DPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAA 118 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-------------TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHH
T ss_pred HHhCCCEEEEECCcccccCCCcc------------ccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHH
Confidence 45679999999999999997421 111 456789999999999887 4444589999999999999999
Q ss_pred HHHCCCceeEEEEecCcccccC
Q 025920 204 RLKYPHVALGALASSAPILYFD 225 (246)
Q Consensus 204 ~~~yP~~v~g~i~sSap~~~~~ 225 (246)
+...|..+++++..+++.....
T Consensus 119 A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 119 AARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HTTT-TTEEEEEEESE-SBTCC
T ss_pred HhcCCCCceEEEecccCCcccc
Confidence 9978878888887766654444
No 95
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.34 E-value=2.2e-06 Score=80.17 Aligned_cols=86 Identities=14% Similarity=0.100 Sum_probs=64.9
Q ss_pred HHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHH
Q 025920 122 DNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLAT 201 (246)
Q Consensus 122 ~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~ 201 (246)
+...+.|+. ...|++|+|.+.+... ..++.++++.++++.+.+..+ ..|++++||||||.++.
T Consensus 115 ~~L~~~GY~-~~~dL~g~gYDwR~~~--------------~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 115 EQLIKWGYK-EGKTLFGFGYDFRQSN--------------RLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVK 177 (440)
T ss_pred HHHHHcCCc-cCCCcccCCCCccccc--------------cHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHH
Confidence 334456754 4889999999865321 134678899999998877653 45899999999999999
Q ss_pred HHHHHCCCc----eeEEEEecCccccc
Q 025920 202 WFRLKYPHV----ALGALASSAPILYF 224 (246)
Q Consensus 202 ~~~~~yP~~----v~g~i~sSap~~~~ 224 (246)
.++.++|+. |+..|+.++|..-.
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 999999974 57778888886544
No 96
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.28 E-value=3.1e-06 Score=71.97 Aligned_cols=90 Identities=23% Similarity=0.202 Sum_probs=67.9
Q ss_pred EEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHH
Q 025920 101 FVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEK 180 (246)
Q Consensus 101 ~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~ 180 (246)
+++-|+.|-.+.++ .-+++.+.+.|+.|++.|.||-|.|.|... ...++--.+-+..|+...++.+++.
T Consensus 33 ~~va~a~Gv~~~fY---RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~--------~~~~~~~~DwA~~D~~aal~~~~~~ 101 (281)
T COG4757 33 LVVAGATGVGQYFY---RRFAAAAAKAGFEVLTFDYRGIGQSRPASL--------SGSQWRYLDWARLDFPAALAALKKA 101 (281)
T ss_pred EEecccCCcchhHh---HHHHHHhhccCceEEEEecccccCCCcccc--------ccCccchhhhhhcchHHHHHHHHhh
Confidence 55667777666554 356677888999999999999999998542 1222333467889999999999876
Q ss_pred cCCCCCCEEEEecChHHHHHHHH
Q 025920 181 YNARHSPVIVVGGSYGGMLATWF 203 (246)
Q Consensus 181 ~~~~~~p~ilvG~S~GG~la~~~ 203 (246)
. +..|...+||||||.+.-.+
T Consensus 102 ~--~~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 102 L--PGHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred C--CCCceEEeeccccceeeccc
Confidence 5 56799999999999875444
No 97
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.24 E-value=3e-06 Score=72.27 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=52.5
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCe---EEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNAL---LVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAIL 174 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~---Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i 174 (246)
.||||+||..++...-+. .+.+..++.||. |++++.-....+.. . .... ... +.++.+++||
T Consensus 2 ~PVVlVHG~~~~~~~~w~---~~~~~l~~~GY~~~~vya~tyg~~~~~~~---~-------~~~~-~~~-~~~~~l~~fI 66 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS---TLAPYLKAAGYCDSEVYALTYGSGNGSPS---V-------QNAH-MSC-ESAKQLRAFI 66 (219)
T ss_dssp --EEEE--TTTTTCGGCC---HHHHHHHHTT--CCCEEEE--S-CCHHTH---H-------HHHH-B-H-HHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHH---HHHHHHHHcCCCcceeEeccCCCCCCCCc---c-------cccc-cch-hhHHHHHHHH
Confidence 699999999884433222 444555667877 78887633222111 0 0000 122 3458899999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKY 207 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~y 207 (246)
+.+.+.-+ . +|-++||||||+++.++....
T Consensus 67 ~~Vl~~TG--a-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 67 DAVLAYTG--A-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHT-----EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHhhC--C-EEEEEEcCCcCHHHHHHHHHc
Confidence 99887664 3 899999999999999998654
No 98
>PRK10115 protease 2; Provisional
Probab=98.24 E-value=8.7e-06 Score=80.35 Aligned_cols=114 Identities=16% Similarity=0.054 Sum_probs=75.0
Q ss_pred CcE-EEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 98 API-FVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 98 ~PI-~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.|+ +..|||.+...... +...+.-+ ...|+.|+.+..||-|.=.. .+.+.... ..-.+..+|+.+.+++
T Consensus 445 ~P~ll~~hGg~~~~~~p~-f~~~~~~l-~~rG~~v~~~n~RGs~g~G~------~w~~~g~~--~~k~~~~~D~~a~~~~ 514 (686)
T PRK10115 445 NPLLVYGYGSYGASIDAD-FSFSRLSL-LDRGFVYAIVHVRGGGELGQ------QWYEDGKF--LKKKNTFNDYLDACDA 514 (686)
T ss_pred CCEEEEEECCCCCCCCCC-ccHHHHHH-HHCCcEEEEEEcCCCCccCH------HHHHhhhh--hcCCCcHHHHHHHHHH
Confidence 355 55678887764321 11222223 34699999999998654322 11010000 0111457888888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+.++--.+..++.+.|+|+||.++++...++|+.++++|+..+.+
T Consensus 515 Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 515 LLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred HHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 876654566799999999999999999999999998888765443
No 99
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.22 E-value=2.9e-06 Score=80.91 Aligned_cols=116 Identities=24% Similarity=0.290 Sum_probs=74.5
Q ss_pred CCCcEEEEe-CCCCCCCcc--ccchhHH-HHHHHHcCCeEEEEccccccCCCC-CCChhhhhcccccCCCCCHHHHHHHH
Q 025920 96 AIAPIFVYL-GAEEALDGD--ISVIGFL-TDNAARFNALLVYIEHRYYGKSIP-FGSREEALKNASTLGYFNSAQAITDY 170 (246)
Q Consensus 96 ~~~PI~l~h-Gg~g~~~~~--~~~~~~~-~~~a~~~g~~Vi~~D~Rg~G~S~p-~~~~~~~~~~~~~~~ylt~~q~l~D~ 170 (246)
++-|.+++. ||++-.-.. +.++..+ .......|+.|+.+|.||.-...- +.+ .++ .++++..+++.
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~---~ik--~kmGqVE~eDQ---- 710 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFES---HIK--KKMGQVEVEDQ---- 710 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHH---HHh--hccCeeeehhh----
Confidence 346766666 888754221 1111111 122345799999999999755431 111 111 24555544444
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 171 AAILLYIKEKYN-ARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 171 ~~~i~~l~~~~~-~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
.+-++.+.++++ ++-.+|.+.|+||||.|++....+||++++.+|+. ||+
T Consensus 711 Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAG-apV 761 (867)
T KOG2281|consen 711 VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAG-APV 761 (867)
T ss_pred HHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEecc-Ccc
Confidence 444566666663 34568999999999999999999999999999975 555
No 100
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.20 E-value=1.3e-05 Score=71.29 Aligned_cols=105 Identities=21% Similarity=0.219 Sum_probs=70.4
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.+.|+++|||................++...|+.|+.+|+|---+- +++ .+++|+.+.+++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p------------------~~~~d~~~a~~~ 139 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-PFP------------------AALEDAYAAYRW 139 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-CCC------------------chHHHHHHHHHH
Confidence 3456667777655444333335677788899999999999964433 211 356666666666
Q ss_pred HHHH---cCCCCCCEEEEecChHHHHHHHHHHHCCC----ceeEEEEecCc
Q 025920 177 IKEK---YNARHSPVIVVGGSYGGMLATWFRLKYPH----VALGALASSAP 220 (246)
Q Consensus 177 l~~~---~~~~~~p~ilvG~S~GG~la~~~~~~yP~----~v~g~i~sSap 220 (246)
+.++ ++.+..+++++|+|-||.|++.++..-.+ ...+.++.++.
T Consensus 140 l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 140 LRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 6544 55666789999999999999998765443 23555655544
No 101
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.19 E-value=5.6e-06 Score=74.79 Aligned_cols=112 Identities=17% Similarity=0.194 Sum_probs=67.8
Q ss_pred CCcEEEEeCCCCCCCccc----cchhHHHHHH------HHcCCeEEEEccccccC--CCCCCChhhhhcccc------cC
Q 025920 97 IAPIFVYLGAEEALDGDI----SVIGFLTDNA------ARFNALLVYIEHRYYGK--SIPFGSREEALKNAS------TL 158 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~----~~~~~~~~~a------~~~g~~Vi~~D~Rg~G~--S~p~~~~~~~~~~~~------~~ 158 (246)
..-|+++|+-.|+..... ...|||.++. ....+-||+.+..|.+. |.|... ++. ..
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~------~p~g~~yg~~F 124 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI------NPGGKPYGSDF 124 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc------CCCCCccccCC
Confidence 456788887777543221 1124555432 12247899999999863 334221 112 11
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCCCCE-EEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 159 GYFNSAQAITDYAAILLYIKEKYNARHSPV-IVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 159 ~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~-ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
.-+| +.|..+.-+.+.+.++++ ++ .++|+|||||.|+.++..|||.|..++..++.
T Consensus 125 P~~t----i~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 125 PVIT----IRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred Cccc----HHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 2234 444444444455555544 34 49999999999999999999999887755443
No 102
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.15 E-value=2.2e-05 Score=67.29 Aligned_cols=49 Identities=24% Similarity=0.412 Sum_probs=42.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 172 AILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+++..+.+++.....++.+.|+||||..|+.++.++|+.+.++++.|+.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 6677788888754445999999999999999999999999999988854
No 103
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.13 E-value=1.3e-05 Score=67.66 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=74.7
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.+.-++++||..++...-.. ..++....++|..++-+|.+|-|+|... ..|-.-....+|+..+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~--~~vA~~~e~~gis~fRfDF~GnGeS~gs------------f~~Gn~~~eadDL~sV~q 97 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIM--KNVAKALEKEGISAFRFDFSGNGESEGS------------FYYGNYNTEADDLHSVIQ 97 (269)
T ss_pred CceEEEEeeccccccchHHH--HHHHHHHHhcCceEEEEEecCCCCcCCc------------cccCcccchHHHHHHHHH
Confidence 35678899998877654321 2334445678999999999999999741 111111123499999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
++.... ..--+++|||-||.++..++.||++ +.-+|..|+-.
T Consensus 98 ~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRy 139 (269)
T KOG4667|consen 98 YFSNSN---RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRY 139 (269)
T ss_pred HhccCc---eEEEEEEeecCccHHHHHHHHhhcC-chheEEccccc
Confidence 987522 1224789999999999999999998 45556555443
No 104
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.11 E-value=2.1e-05 Score=70.47 Aligned_cols=77 Identities=18% Similarity=0.323 Sum_probs=54.2
Q ss_pred HcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025920 126 RFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 126 ~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~ 205 (246)
+.|+.|+...|+||+.|+..+-. .. . -...| .+++.....++.+..-+|++|+|.||.-++|.++
T Consensus 266 ~lgYsvLGwNhPGFagSTG~P~p---------~n---~-~nA~D--aVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs 330 (517)
T KOG1553|consen 266 QLGYSVLGWNHPGFAGSTGLPYP---------VN---T-LNAAD--AVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAAS 330 (517)
T ss_pred HhCceeeccCCCCccccCCCCCc---------cc---c-hHHHH--HHHHHHHHHcCCCccceEEEEeecCCchHHHHhh
Confidence 56999999999999999753210 00 1 12223 2344444455544556999999999999999999
Q ss_pred HCCCceeEEEEec
Q 025920 206 KYPHVALGALASS 218 (246)
Q Consensus 206 ~yP~~v~g~i~sS 218 (246)
.||+. +++|+-.
T Consensus 331 ~YPdV-kavvLDA 342 (517)
T KOG1553|consen 331 NYPDV-KAVVLDA 342 (517)
T ss_pred cCCCc-eEEEeec
Confidence 99995 7777654
No 105
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.10 E-value=2.4e-05 Score=73.88 Aligned_cols=84 Identities=20% Similarity=0.195 Sum_probs=58.0
Q ss_pred CCeEEEEcc-ccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHH
Q 025920 128 NALLVYIEH-RYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYN-ARHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 128 g~~Vi~~D~-Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~-~~~~p~ilvG~S~GG~la~~~~~ 205 (246)
.+.|+.+|+ +|+|.|.... .. ...+.+++.+|+.++++.+.+++. ..+.|++|+|+||||..+..++.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~---------~~-~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADK---------AD-YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred ccCeEEEeCCCCcCcccCCC---------CC-CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 368999996 6999986411 11 113457889999999998776653 24579999999999998877665
Q ss_pred HC---C-------CceeEEEEecCcc
Q 025920 206 KY---P-------HVALGALASSAPI 221 (246)
Q Consensus 206 ~y---P-------~~v~g~i~sSap~ 221 (246)
+- . =.++|+++..+-+
T Consensus 191 ~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 191 RINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHhhccccCCceeeeEEEEEecccc
Confidence 41 1 1356777766543
No 106
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.04 E-value=8.6e-06 Score=68.63 Aligned_cols=113 Identities=19% Similarity=0.163 Sum_probs=68.0
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCC-CCCCChhhhhcccccCCCC---CHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKS-IPFGSREEALKNASTLGYF---NSAQAITDYAA 172 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S-~p~~~~~~~~~~~~~~~yl---t~~q~l~D~~~ 172 (246)
.+.||++|+..|-. .+...+.+...+.|+.|+++|.- .|.. .+.. ..+.. ..+..+ ..++..+|+..
T Consensus 14 ~~~Vvv~~d~~G~~----~~~~~~ad~lA~~Gy~v~~pD~f-~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~a 84 (218)
T PF01738_consen 14 RPAVVVIHDIFGLN----PNIRDLADRLAEEGYVVLAPDLF-GGRGAPPSD-PEEAF---AAMRELFAPRPEQVAADLQA 84 (218)
T ss_dssp EEEEEEE-BTTBS-----HHHHHHHHHHHHTT-EEEEE-CC-CCTS--CCC-HHCHH---HHHHHCHHHSHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCc----hHHHHHHHHHHhcCCCEEecccc-cCCCCCccc-hhhHH---HHHHHHHhhhHHHHHHHHHH
Confidence 45678888755533 22223444445679999999983 3433 2221 11000 011111 14577888888
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 173 ILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 173 ~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
.++.++.+...+..++.++|.|+||.+++.++.+. ..+++++..-+
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 89998876544456899999999999999998877 45677776444
No 107
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.02 E-value=8.7e-05 Score=65.92 Aligned_cols=114 Identities=13% Similarity=0.134 Sum_probs=65.7
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
..++++.||-++.---.....-+++.....++.|+-+.++--. ..+++-+.++.++|+.++++++
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy---------------~G~G~~SL~~D~~eI~~~v~yl 97 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSY---------------SGWGTSSLDRDVEEIAQLVEYL 97 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGB---------------TTS-S--HHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCcc---------------CCcCcchhhhHHHHHHHHHHHH
Confidence 4577888877764322222233444444568999999877311 1223335678899999999999
Q ss_pred HHHcCC--CCCCEEEEecChHHHHHHHHHHHCC-----CceeEEEEecCcccccCCC
Q 025920 178 KEKYNA--RHSPVIVVGGSYGGMLATWFRLKYP-----HVALGALASSAPILYFDDI 227 (246)
Q Consensus 178 ~~~~~~--~~~p~ilvG~S~GG~la~~~~~~yP-----~~v~g~i~sSap~~~~~~~ 227 (246)
+...+. ...+++|+|||-|..-++.|..+.. ..|+|+|+ -||+-..+-+
T Consensus 98 r~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~IL-QApVSDREa~ 153 (303)
T PF08538_consen 98 RSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAIL-QAPVSDREAI 153 (303)
T ss_dssp HHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEE-EEE---TTST
T ss_pred HHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEE-eCCCCChhHh
Confidence 987321 3458999999999999999988753 56889886 4677655544
No 108
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.01 E-value=4.7e-05 Score=62.45 Aligned_cols=52 Identities=19% Similarity=0.158 Sum_probs=38.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHH-HHCCCceeEEEEecCccc
Q 025920 171 AAILLYIKEKYNARHSPVIVVGGSYGGMLATWFR-LKYPHVALGALASSAPIL 222 (246)
Q Consensus 171 ~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~-~~yP~~v~g~i~sSap~~ 222 (246)
.++++.+.+.....+.++++||||+|+..++.++ ......|.|+++.+++-.
T Consensus 40 ~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 40 DEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 3445555554443345799999999999999999 778899999999887654
No 109
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.00 E-value=6.7e-05 Score=67.71 Aligned_cols=149 Identities=19% Similarity=0.294 Sum_probs=93.0
Q ss_pred CCCceeeEEEeecCCCC--CCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCccccchhHHH-HHHHHcC
Q 025920 52 SEDFQTFYYNQTLDHFN--YRPESYSTFQQRYVINFKYWGGGAGADAIAPIFVYLGAEEALDGDISVIGFLT-DNAARFN 128 (246)
Q Consensus 52 ~~~~~~~~~~q~lDhf~--~~p~~~~tF~qry~~~~~~~~~g~~~~~~~PI~l~hGg~g~~~~~~~~~~~~~-~~a~~~g 128 (246)
+..+.+..|..|+++.- .=|...++=.-++.. .+-|.. +.+||.+..-|.|+..-+. ...+++ .++++ |
T Consensus 50 ~~~~~eG~F~SP~~~~~~~~lP~es~~a~~~~~~-P~~~~~-----~~rp~~IhLagTGDh~f~r-R~~l~a~pLl~~-g 121 (348)
T PF09752_consen 50 DCKIREGEFRSPLAFYLPGLLPEESRTARFQLLL-PKRWDS-----PYRPVCIHLAGTGDHGFWR-RRRLMARPLLKE-G 121 (348)
T ss_pred ceEEEEeEeCCchhhhccccCChhHhheEEEEEE-CCcccc-----CCCceEEEecCCCccchhh-hhhhhhhHHHHc-C
Confidence 34578889999977642 224433332223333 344532 3477777556666654332 223433 45555 9
Q ss_pred CeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025920 129 ALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 129 ~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP 208 (246)
..-+.++.+|||...|.....-.+.+..++ ++-..+.+.+...++.+++++ + ..|+.+.|-||||.+|+..+...|
T Consensus 122 i~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl-~~~g~~~i~E~~~Ll~Wl~~~-G--~~~~g~~G~SmGG~~A~laa~~~p 197 (348)
T PF09752_consen 122 IASLILENPYYGQRKPKDQRRSSLRNVSDL-FVMGRATILESRALLHWLERE-G--YGPLGLTGISMGGHMAALAASNWP 197 (348)
T ss_pred cceEEEecccccccChhHhhcccccchhHH-HHHHhHHHHHHHHHHHHHHhc-C--CCceEEEEechhHhhHHhhhhcCC
Confidence 999999999999988743211001100000 001245678888888998877 3 348999999999999999999999
Q ss_pred Ccee
Q 025920 209 HVAL 212 (246)
Q Consensus 209 ~~v~ 212 (246)
..+.
T Consensus 198 ~pv~ 201 (348)
T PF09752_consen 198 RPVA 201 (348)
T ss_pred Ccee
Confidence 8754
No 110
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.00 E-value=3.1e-05 Score=80.96 Aligned_cols=99 Identities=14% Similarity=-0.047 Sum_probs=69.9
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.|++++||..+....|. .+...+ ..++.|+.+|.+|+|.+.+. ..+.++..+|+.+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~---~l~~~l--~~~~~v~~~~~~g~~~~~~~--------------~~~l~~la~~~~~~i~~ 1128 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFS---VLSRYL--DPQWSIYGIQSPRPDGPMQT--------------ATSLDEVCEAHLATLLE 1128 (1296)
T ss_pred CCCeEEecCCCCchHHHH---HHHHhc--CCCCcEEEEECCCCCCCCCC--------------CCCHHHHHHHHHHHHHh
Confidence 468999999888765443 222222 22578999999999866431 13566777787766664
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHH---CCCceeEEEEecC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLK---YPHVALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~---yP~~v~g~i~sSa 219 (246)
+. ...|++++||||||++|..++.+ .|+.+..+++..+
T Consensus 1129 ~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1129 QQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred hC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 32 23489999999999999999885 5788877776543
No 111
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.95 E-value=4.3e-05 Score=67.33 Aligned_cols=45 Identities=24% Similarity=0.319 Sum_probs=40.4
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
+.+..+++++.+++.++|.|+||+.+..+..++||.+.+++..++
T Consensus 258 ~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 258 EVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 367788889999999999999999999999999999999887654
No 112
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.94 E-value=1.8e-05 Score=67.78 Aligned_cols=100 Identities=18% Similarity=0.100 Sum_probs=57.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
..-+|.++..+|++..|..+...+ . -...++.++++|.|.-...+ .+.|++.+.+.
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~l----p-~~iel~avqlPGR~~r~~ep-------------------~~~di~~Lad~ 62 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRL----P-ADIELLAVQLPGRGDRFGEP-------------------LLTDIESLADE 62 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhC----C-chhheeeecCCCcccccCCc-------------------ccccHHHHHHH
Confidence 344566666666665553221111 1 13579999999999764211 12233333333
Q ss_pred HHHHcC--CCCCCEEEEecChHHHHHHHHHHHCC---CceeEEEEec--Cc
Q 025920 177 IKEKYN--ARHSPVIVVGGSYGGMLATWFRLKYP---HVALGALASS--AP 220 (246)
Q Consensus 177 l~~~~~--~~~~p~ilvG~S~GG~la~~~~~~yP---~~v~g~i~sS--ap 220 (246)
+..... ..+.|+.++||||||++|-..+.++- ....+.++|+ ||
T Consensus 63 la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 63 LANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred HHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 333332 24569999999999999999876542 2245565544 56
No 113
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.93 E-value=7.9e-05 Score=64.99 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=69.4
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHH-HcCC----eEEEEccccc----cCCCCCCChh----hhhcccccCCCCC
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAA-RFNA----LLVYIEHRYY----GKSIPFGSRE----EALKNASTLGYFN 162 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~-~~g~----~Vi~~D~Rg~----G~S~p~~~~~----~~~~~~~~~~ylt 162 (246)
...|.||+||..|+...+. .|.+.+. +.|. .++.++--|. |.=.. .... -.+.+..+ -+
T Consensus 10 ~~tPTifihG~~gt~~s~~----~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~-~~~nPiIqV~F~~n~~---~~ 81 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFN----HMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSK-NAKNPIIQVNFEDNRN---AN 81 (255)
T ss_dssp S-EEEEEE--TTGGCCCCH----HHHHHHHHCSTS-S-EEEEEEETTSEEEEES---T-T-SS-EEEEEESSTT----CH
T ss_pred CCCcEEEECCCCCChhHHH----HHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCC-CCCCCEEEEEecCCCc---CC
Confidence 3579999999999887764 3444443 3332 2333333222 22110 0000 00111111 23
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-----ceeEEEEecCcccccCC
Q 025920 163 SAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH-----VALGALASSAPILYFDD 226 (246)
Q Consensus 163 ~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~-----~v~g~i~sSap~~~~~~ 226 (246)
..+..+-+..+++.|++++..+ ++.+|||||||+.+..|+..|-. .+...|+..+|......
T Consensus 82 ~~~qa~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~ 148 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILG 148 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccc
Confidence 4455677778889999988755 69999999999999999988643 46899999999876644
No 114
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.91 E-value=5.3e-05 Score=68.25 Aligned_cols=117 Identities=17% Similarity=0.124 Sum_probs=66.7
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCC-CChh-hhhc-----cccc-CCCCCHHHHHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPF-GSRE-EALK-----NAST-LGYFNSAQAITDY 170 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~-~~~~-~~~~-----~~~~-~~ylt~~q~l~D~ 170 (246)
-||.+||..+....+.. ...++ ..|+.|+.+|-||.|..++. .... ...+ ...+ ..-+-...++.|+
T Consensus 85 avv~~hGyg~~~~~~~~----~~~~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 85 AVVQFHGYGGRSGDPFD----LLPWA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp EEEEE--TT--GGGHHH----HHHHH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred EEEEecCCCCCCCCccc----ccccc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 35667887766433221 11233 56999999999999933221 1000 0000 0001 1111234567898
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 171 AAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 171 ~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
...++.++.....+..++.+.|+|.||.+++..+...|. |.++++.-+-+
T Consensus 160 ~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~vP~l 209 (320)
T PF05448_consen 160 VRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEESESS
T ss_pred HHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecCCCc
Confidence 888888887655566789999999999999999999986 67777765433
No 115
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.89 E-value=1.2e-05 Score=72.52 Aligned_cols=107 Identities=18% Similarity=0.241 Sum_probs=78.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHH-----HHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDN-----AARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYA 171 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~-----a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~ 171 (246)
-.|++++||.+|+...|+..+..+.+- -..+-+.||++..+|||-|.... ..-++ .+..+
T Consensus 152 v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s-----------k~GFn----~~a~A 216 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS-----------KTGFN----AAATA 216 (469)
T ss_pred ccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc-----------cCCcc----HHHHH
Confidence 369999999999999888766665542 12234689999999999997522 11122 23445
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 172 AILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
.+++.+.-+++.. +.++-|+-||..++..++..||+.|.|.=+.-++
T Consensus 217 rvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 217 RVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred HHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 6666666666543 6999999999999999999999999887654433
No 116
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=5.4e-05 Score=75.44 Aligned_cols=119 Identities=18% Similarity=0.113 Sum_probs=78.7
Q ss_pred CCcEEEE-eCCCCCCCcccc-chhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHH
Q 025920 97 IAPIFVY-LGAEEALDGDIS-VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAIL 174 (246)
Q Consensus 97 ~~PI~l~-hGg~g~~~~~~~-~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i 174 (246)
+-|+++. |||+++...... ..++-...+...|+.|+.+|-||-|...+--. .+ -..+++. .-++|....+
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~--~~--~~~~lG~----~ev~D~~~~~ 596 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFR--SA--LPRNLGD----VEVKDQIEAV 596 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHH--HH--hhhhcCC----cchHHHHHHH
Confidence 5676554 488874432211 12344455778899999999999886653100 00 0123332 2467777777
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEE-EEecCccccc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGA-LASSAPILYF 224 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~-i~sSap~~~~ 224 (246)
+.+.+...++..++.++|+||||.+++....++|+.+.++ ++. +|+..+
T Consensus 597 ~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvav-aPVtd~ 646 (755)
T KOG2100|consen 597 KKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAV-APVTDW 646 (755)
T ss_pred HHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEe-cceeee
Confidence 7777766677789999999999999999999999655555 554 566444
No 117
>COG0400 Predicted esterase [General function prediction only]
Probab=97.88 E-value=4.7e-05 Score=64.36 Aligned_cols=54 Identities=28% Similarity=0.351 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 166 AITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 166 ~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
..+.++++++.+.++++.+..+++++|.|=|+++++....++|+.+.++|+.|+
T Consensus 79 ~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g 132 (207)
T COG0400 79 ETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSG 132 (207)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCC
Confidence 345566777777788888778999999999999999999999999999998764
No 118
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.88 E-value=9.5e-05 Score=73.88 Aligned_cols=88 Identities=18% Similarity=0.082 Sum_probs=65.8
Q ss_pred HHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHc--------------CCCC
Q 025920 120 LTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKY--------------NARH 185 (246)
Q Consensus 120 ~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~--------------~~~~ 185 (246)
+.+.....||.|+..|.||+|.|.... .. . ..+..+|...+|+++..+. ..-+
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~---------~~---~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~Wsn 337 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCP---------TT---G-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSN 337 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcC---------cc---C-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCC
Confidence 445556779999999999999997521 01 1 1356788888899887431 1124
Q ss_pred CCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 186 SPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 186 ~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
.+|.++|.||||.++...+...|..++++|..++.
T Consensus 338 GkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 338 GKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred CeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 58999999999999999999988888888875543
No 119
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.87 E-value=0.00023 Score=61.38 Aligned_cols=113 Identities=18% Similarity=0.144 Sum_probs=73.3
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEcccc-ccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRY-YGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg-~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+-||++|+-.|-... +.-+.+.....|+.|+++|.-+ .|.+............. ...-.+..+.+.|+...++.
T Consensus 28 P~VIv~hei~Gl~~~----i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~a~~~~ 102 (236)
T COG0412 28 PGVIVLHEIFGLNPH----IRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG-LVERVDPAEVLADIDAALDY 102 (236)
T ss_pred CEEEEEecccCCchH----HHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh-hhccCCHHHHHHHHHHHHHH
Confidence 346777765443321 1233344456799999999876 35554433211111110 01112347889999999999
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEE
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALA 216 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~ 216 (246)
++.+...+..++.++|.||||.+++.++.+.| .++++++
T Consensus 103 L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~ 141 (236)
T COG0412 103 LARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVA 141 (236)
T ss_pred HHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEE
Confidence 98776445568999999999999999999998 5566665
No 120
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.82 E-value=3.8e-05 Score=67.00 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=65.8
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.|+|++|+..|....|.. +...+.. ...|+.++-|++|.-.. ..-+.+++++.+.+-|+.+
T Consensus 1 ~pLF~fhp~~G~~~~~~~---L~~~l~~--~~~v~~l~a~g~~~~~~--------------~~~~l~~~a~~yv~~Ir~~ 61 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAP---LAAALGP--LLPVYGLQAPGYGAGEQ--------------PFASLDDMAAAYVAAIRRV 61 (257)
T ss_pred CCEEEEcCCCCcHHHHHH---HHHHhcc--CceeeccccCccccccc--------------ccCCHHHHHHHHHHHHHHh
Confidence 479999998888766532 2222222 25699999999985221 1124566766665555543
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHH---CCCceeEEEEecCccc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLK---YPHVALGALASSAPIL 222 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~---yP~~v~g~i~sSap~~ 222 (246)
. +.-|++|.|+|+||.+|...+.+ --+.|.-+++.-++..
T Consensus 62 Q-----P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 62 Q-----PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred C-----CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 3 45599999999999999998754 3446666666555443
No 121
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.80 E-value=0.00015 Score=69.34 Aligned_cols=109 Identities=7% Similarity=-0.036 Sum_probs=79.2
Q ss_pred CCcEEEEeCCCCCCCcc--ccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGD--ISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAIL 174 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~--~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i 174 (246)
+.||+++...---...+ .... -+.+.+.+.|+.|+++|.|.-+.+. +.++.++.++.+.+.+
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~-SlVr~lv~qG~~VflIsW~nP~~~~---------------r~~~ldDYv~~i~~Al 278 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEK-SFVQYCLKNQLQVFIISWRNPDKAH---------------REWGLSTYVDALKEAV 278 (560)
T ss_pred CCcEEEechhhhhhheeecCCcc-hHHHHHHHcCCeEEEEeCCCCChhh---------------cCCCHHHHHHHHHHHH
Confidence 57998888643221111 1112 3445566789999999999855432 4567778887777888
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHH----HHHHCCC-ceeEEEEecCcccc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATW----FRLKYPH-VALGALASSAPILY 223 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~----~~~~yP~-~v~g~i~sSap~~~ 223 (246)
+.+++..+ ..++.++|+|+||.+++. +++++++ .|+.+++..+|+..
T Consensus 279 d~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 279 DAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 88877653 347999999999999997 8889986 79999988888873
No 122
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.78 E-value=0.00024 Score=58.98 Aligned_cols=86 Identities=20% Similarity=0.237 Sum_probs=64.6
Q ss_pred HHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCE-EEEecChHHH
Q 025920 120 LTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPV-IVVGGSYGGM 198 (246)
Q Consensus 120 ~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~-ilvG~S~GG~ 198 (246)
+.....+.|+.++-++.||-|+|...-+ ... --++|..+.+++++.+. ++.+. .+.|.|+|+.
T Consensus 52 la~~l~~~G~atlRfNfRgVG~S~G~fD--------~Gi------GE~~Da~aaldW~~~~h--p~s~~~~l~GfSFGa~ 115 (210)
T COG2945 52 LARALVKRGFATLRFNFRGVGRSQGEFD--------NGI------GELEDAAAALDWLQARH--PDSASCWLAGFSFGAY 115 (210)
T ss_pred HHHHHHhCCceEEeecccccccccCccc--------CCc------chHHHHHHHHHHHHhhC--CCchhhhhcccchHHH
Confidence 3445667899999999999999974211 111 13789999999999876 45555 7889999999
Q ss_pred HHHHHHHHCCCceeEEEEecCccc
Q 025920 199 LATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 199 la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+++.++++.|+. ...+..++|+.
T Consensus 116 Ia~~la~r~~e~-~~~is~~p~~~ 138 (210)
T COG2945 116 IAMQLAMRRPEI-LVFISILPPIN 138 (210)
T ss_pred HHHHHHHhcccc-cceeeccCCCC
Confidence 999999999986 45555566654
No 123
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.74 E-value=0.00024 Score=59.96 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 165 QAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 165 q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+..+-+.++|+...++ ..+..++++.|.|.||++|+.++.++|+.+.|+|+.|+.+.
T Consensus 85 ~s~~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 85 ESAERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 3444455566654433 35566899999999999999999999999999999887653
No 124
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.73 E-value=5.5e-05 Score=69.00 Aligned_cols=99 Identities=16% Similarity=0.150 Sum_probs=56.9
Q ss_pred HHHHHHHcCCeEEEEccccccCCCCCCChhhh-------h-cccccCCCCCH-HHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 025920 120 LTDNAARFNALLVYIEHRYYGKSIPFGSREEA-------L-KNASTLGYFNS-AQAITDYAAILLYIKEKYNARHSPVIV 190 (246)
Q Consensus 120 ~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~-------~-~~~~~~~ylt~-~q~l~D~~~~i~~l~~~~~~~~~p~il 190 (246)
+.....+.|+.|+++|.+|+|+..+....... + .+...++ .|. -...-|....++.+...-.+++.++.+
T Consensus 152 ~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG-~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~ 230 (390)
T PF12715_consen 152 YGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLG-RSLAGLMAWDDMRALDFLASLPEVDPDRIGC 230 (390)
T ss_dssp HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT---HHHHHHHHHHHHHHHHCT-TTEEEEEEEE
T ss_pred HHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcC-cCHHHHHHHHHHHHHHHHhcCcccCccceEE
Confidence 34445568999999999999998653321100 0 0000111 111 122334445667777666667779999
Q ss_pred EecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 191 VGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 191 vG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
+|.||||..+.++++..+.+ +++++++..
T Consensus 231 ~GfSmGg~~a~~LaALDdRI-ka~v~~~~l 259 (390)
T PF12715_consen 231 MGFSMGGYRAWWLAALDDRI-KATVANGYL 259 (390)
T ss_dssp EEEGGGHHHHHHHHHH-TT---EEEEES-B
T ss_pred EeecccHHHHHHHHHcchhh-HhHhhhhhh
Confidence 99999999999999988765 666665543
No 125
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.70 E-value=0.00015 Score=68.52 Aligned_cols=110 Identities=15% Similarity=0.160 Sum_probs=66.3
Q ss_pred CCcE-EEEeCCCCCCCccccchhHHHHHHHHcC-CeEEEEccc----cccCCCCCCChhhhhcccccCCCCCHHHHHHHH
Q 025920 97 IAPI-FVYLGAEEALDGDISVIGFLTDNAARFN-ALLVYIEHR----YYGKSIPFGSREEALKNASTLGYFNSAQAITDY 170 (246)
Q Consensus 97 ~~PI-~l~hGg~g~~~~~~~~~~~~~~~a~~~g-~~Vi~~D~R----g~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~ 170 (246)
+.|| |++|||.-....-... ....++.+.+ ..|+.+++| ||+.+.... ......+.|.
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~--------------~~~n~g~~D~ 157 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIE--------------LPGNYGLKDQ 157 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCC--------------CCcchhHHHH
Confidence 4565 5566764322211110 1234455544 899999999 333221100 0111346777
Q ss_pred HHHHHHHHHH---cCCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCccc
Q 025920 171 AAILLYIKEK---YNARHSPVIVVGGSYGGMLATWFRLK--YPHVALGALASSAPIL 222 (246)
Q Consensus 171 ~~~i~~l~~~---~~~~~~p~ilvG~S~GG~la~~~~~~--yP~~v~g~i~sSap~~ 222 (246)
...+++++++ ++.+..++.++|+|.||.++.++... .+..+.++|+.|++..
T Consensus 158 ~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 158 RLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 7777777654 45556689999999999999988775 3456888888776543
No 126
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.68 E-value=0.00086 Score=60.74 Aligned_cols=108 Identities=23% Similarity=0.224 Sum_probs=69.4
Q ss_pred CcEEEEeCCCCCCCc--cccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDG--DISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~--~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
+-||++|||+..... ....-.+...++.+.++.|+.+|+|=-=+. |++ -+.+|....+.
T Consensus 91 p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-~~P------------------a~y~D~~~Al~ 151 (336)
T KOG1515|consen 91 PVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-PFP------------------AAYDDGWAALK 151 (336)
T ss_pred eEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC-CCC------------------ccchHHHHHHH
Confidence 446778888765543 222335677888999999999999943222 111 12344443344
Q ss_pred HHHH----HcCCCCCCEEEEecChHHHHHHHHHHHC------CCceeEEEEecCccccc
Q 025920 176 YIKE----KYNARHSPVIVVGGSYGGMLATWFRLKY------PHVALGALASSAPILYF 224 (246)
Q Consensus 176 ~l~~----~~~~~~~p~ilvG~S~GG~la~~~~~~y------P~~v~g~i~sSap~~~~ 224 (246)
++.+ ++..+-.+++|.|-|-||.+|..++++. +..++|.|+..+-....
T Consensus 152 w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 152 WVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred HHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 4333 3445556899999999999999987652 35678988887544433
No 127
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.65 E-value=0.00046 Score=60.13 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=66.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.-||+++++|......++ ...+.++| ..|+.|+.+|....+... ....++++++++++
T Consensus 16 ~yPVv~f~~G~~~~~s~Y--s~ll~hvA-ShGyIVV~~d~~~~~~~~-------------------~~~~~~~~~~vi~W 73 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWY--SQLLEHVA-SHGYIVVAPDLYSIGGPD-------------------DTDEVASAAEVIDW 73 (259)
T ss_pred CcCEEEEeCCcCCCHHHH--HHHHHHHH-hCceEEEEecccccCCCC-------------------cchhHHHHHHHHHH
Confidence 367777766655544442 34555555 579999999966533211 01235555566666
Q ss_pred HHHHcC--------CCCCCEEEEecChHHHHHHHHHHHC-----CCceeEEEEecC
Q 025920 177 IKEKYN--------ARHSPVIVVGGSYGGMLATWFRLKY-----PHVALGALASSA 219 (246)
Q Consensus 177 l~~~~~--------~~~~p~ilvG~S~GG~la~~~~~~y-----P~~v~g~i~sSa 219 (246)
+.+.+. .+-.++.+.|||-||-+|..++..+ +..++++++..+
T Consensus 74 l~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 74 LAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDP 129 (259)
T ss_pred HHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecc
Confidence 544321 2345899999999999999998887 567888888764
No 128
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.63 E-value=0.00013 Score=65.91 Aligned_cols=110 Identities=8% Similarity=0.044 Sum_probs=62.3
Q ss_pred CCcEEEEeCCCCCC-CccccchhHHHHHHHH--cCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEAL-DGDISVIGFLTDNAAR--FNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAI 173 (246)
Q Consensus 97 ~~PI~l~hGg~g~~-~~~~~~~~~~~~~a~~--~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~ 173 (246)
+..+|++||..++. ...+. ......+..+ .+++||++|....-... ...+. .++...-+.++.+
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~-~~~~~all~~~~~d~NVI~VDWs~~a~~~----Y~~a~--------~n~~~vg~~la~~ 137 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWI-QDMIKALLQKDTGDYNVIVVDWSRGASNN----YPQAV--------ANTRLVGRQLAKF 137 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHH-HHHHHHHHCC--S-EEEEEEE-HHHHSS-----HHHHH--------HHHHHHHHHHHHH
T ss_pred CCeEEEEcCcCCcccchhHH-HHHHHHHHhhccCCceEEEEcchhhcccc----ccchh--------hhHHHHHHHHHHH
Confidence 45678889988877 33221 1222333344 57899999997543211 00000 0123344456677
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecC
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH--VALGALASSA 219 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~--~v~g~i~sSa 219 (246)
|..|....+.+-.++.++|||+|+.+|.....+... ++..+.+.-+
T Consensus 138 l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 138 LSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred HHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 777775555556689999999999999999988877 6767766553
No 129
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.63 E-value=0.001 Score=58.69 Aligned_cols=108 Identities=14% Similarity=0.070 Sum_probs=79.5
Q ss_pred cEEEEeCCCCCCCc-ccc--chhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 99 PIFVYLGAEEALDG-DIS--VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 99 PI~l~hGg~g~~~~-~~~--~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
.|+=||.-.-+... |.. +..-+.++..+ +.|+-+|.+|+=.-.|. .+++..|.|.++..+++..+++
T Consensus 48 aiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~--------~p~~y~yPsmd~LAd~l~~VL~ 117 (326)
T KOG2931|consen 48 AIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPS--------FPEGYPYPSMDDLADMLPEVLD 117 (326)
T ss_pred eEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCcc--------CCCCCCCCCHHHHHHHHHHHHH
Confidence 35667765444333 211 22344555554 78999999999655441 2356788899999999999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+++-+ -+|-+|-.-|+.+-+.|++++|++|.|+|+.++--.
T Consensus 118 ~f~lk------~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 118 HFGLK------SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC 158 (326)
T ss_pred hcCcc------eEEEecccccHHHHHHHHhcChhheeEEEEEecCCC
Confidence 88754 399999999999999999999999999999875443
No 130
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.57 E-value=0.00033 Score=59.47 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=28.4
Q ss_pred CCCEEEEecChHHHHHHHHHHH---C----CC-----ceeEEEEecCcccccCC
Q 025920 185 HSPVIVVGGSYGGMLATWFRLK---Y----PH-----VALGALASSAPILYFDD 226 (246)
Q Consensus 185 ~~p~ilvG~S~GG~la~~~~~~---y----P~-----~v~g~i~sSap~~~~~~ 226 (246)
..|++++||||||.++-.+... . ++ .....+..++|.+-...
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~ 130 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRY 130 (217)
T ss_pred cccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCcc
Confidence 3589999999999999876542 2 11 23344567788865543
No 131
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.57 E-value=0.0012 Score=61.46 Aligned_cols=51 Identities=22% Similarity=0.332 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCC--CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 172 AILLYIKEKYNA--RHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 172 ~~i~~l~~~~~~--~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
+++-.+.+++.. +....+|.|+||||..|++.+.+||+.+.++++.|+-+.
T Consensus 272 eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~w 324 (411)
T PRK10439 272 ELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFW 324 (411)
T ss_pred HHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEecccee
Confidence 455566666543 345789999999999999999999999999988876553
No 132
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.52 E-value=0.00051 Score=63.13 Aligned_cols=113 Identities=19% Similarity=0.162 Sum_probs=67.9
Q ss_pred CCcEEE-EeCCCCCCCccccchhHHHH------------------HHHHcCCeEEEEccc-cccCCCCCCChhhhhcccc
Q 025920 97 IAPIFV-YLGAEEALDGDISVIGFLTD------------------NAARFNALLVYIEHR-YYGKSIPFGSREEALKNAS 156 (246)
Q Consensus 97 ~~PI~l-~hGg~g~~~~~~~~~~~~~~------------------~a~~~g~~Vi~~D~R-g~G~S~p~~~~~~~~~~~~ 156 (246)
+.||+| +.||+|+++.+. .+.+ ..-...+.|+.+|+| |.|-|.... .
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g----~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~---------~ 105 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWG----LFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGND---------P 105 (415)
T ss_dssp SS-EEEEEE-TTTB-THHH----HHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESS---------G
T ss_pred CccEEEEecCCceeccccc----cccccCceEEeecccccccccccccccccceEEEeecCceEEeeccc---------c
Confidence 456655 569999886531 2211 111224789999966 899996422 1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHHHH----HHC------CCceeEEEEecCccc
Q 025920 157 TLGYFNSAQAITDYAAILLYIKEKYNA-RHSPVIVVGGSYGGMLATWFR----LKY------PHVALGALASSAPIL 222 (246)
Q Consensus 157 ~~~ylt~~q~l~D~~~~i~~l~~~~~~-~~~p~ilvG~S~GG~la~~~~----~~y------P~~v~g~i~sSap~~ 222 (246)
.....+.+++.+|+.++++.+-.++.. .+.|++|.|-||||..+..++ ... +=.++|+++.++-+.
T Consensus 106 ~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 106 SDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp GGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred ccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 223457789999999999887766542 455999999999997654443 333 223678887775543
No 133
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.51 E-value=0.00048 Score=57.38 Aligned_cols=88 Identities=17% Similarity=0.221 Sum_probs=52.7
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCC--eEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNA--LLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~--~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
|+.+||..++..+... ..+.+...+.+. .+..+|.+. ..+++++.+.++++..
T Consensus 2 ilYlHGF~Ssp~S~Ka--~~l~~~~~~~~~~~~~~~p~l~~-----------------------~p~~a~~~l~~~i~~~ 56 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKA--QALKQYFAEHGPDIQYPCPDLPP-----------------------FPEEAIAQLEQLIEEL 56 (187)
T ss_pred eEEecCCCCCCCCHHH--HHHHHHHHHhCCCceEECCCCCc-----------------------CHHHHHHHHHHHHHhC
Confidence 6788998887766432 244444444332 233333221 1235666665555543
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
. ...+.|+|.|+||..|.+++.+++-. . |+..+.+
T Consensus 57 ~------~~~~~liGSSlGG~~A~~La~~~~~~--a-vLiNPav 91 (187)
T PF05728_consen 57 K------PENVVLIGSSLGGFYATYLAERYGLP--A-VLINPAV 91 (187)
T ss_pred C------CCCeEEEEEChHHHHHHHHHHHhCCC--E-EEEcCCC
Confidence 3 22499999999999999999999743 3 4444433
No 134
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.48 E-value=0.0007 Score=62.38 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=24.4
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 187 PVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
++.++|||+||+.++..+.+.+ .++.+|+.-+-+.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d~-r~~~~I~LD~W~~ 263 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQDT-RFKAGILLDPWMF 263 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH-T-T--EEEEES---T
T ss_pred heeeeecCchHHHHHHHHhhcc-CcceEEEeCCccc
Confidence 6999999999999999888774 4677777666444
No 135
>PLN02209 serine carboxypeptidase
Probab=97.44 E-value=0.0053 Score=57.63 Aligned_cols=84 Identities=18% Similarity=0.178 Sum_probs=52.7
Q ss_pred CCeEEEEcc-ccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHH-
Q 025920 128 NALLVYIEH-RYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYN-ARHSPVIVVGGSYGGMLATWFR- 204 (246)
Q Consensus 128 g~~Vi~~D~-Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~-~~~~p~ilvG~S~GG~la~~~~- 204 (246)
.++|+.+|+ -|.|-|.... ...+.+.++.++|+.++++.+-+++. ..+.|+++.|.||||.-+-.++
T Consensus 117 ~anllfiDqPvGtGfSy~~~----------~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~ 186 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKT----------PIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVH 186 (437)
T ss_pred cCcEEEecCCCCCCccCCCC----------CCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHH
Confidence 368999994 5889885321 11122334556888888887665553 2346999999999997444443
Q ss_pred ---HHC-----C-CceeEEEEecCcc
Q 025920 205 ---LKY-----P-HVALGALASSAPI 221 (246)
Q Consensus 205 ---~~y-----P-~~v~g~i~sSap~ 221 (246)
... + =.++|+++.++-+
T Consensus 187 ~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 187 EISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred HHHhhcccccCCceeeeeEEecCccc
Confidence 222 1 1356777766543
No 136
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.43 E-value=0.0038 Score=58.54 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=51.6
Q ss_pred CCeEEEEc-cccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHHHHH
Q 025920 128 NALLVYIE-HRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNA-RHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 128 g~~Vi~~D-~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~-~~~p~ilvG~S~GG~la~~~~~ 205 (246)
.++|+.+| .-|.|-|.... ...+.+.++.++|+.++++.+-+++.. .+.|++++|.||||..+-.++.
T Consensus 115 ~anllfiDqPvGtGfSy~~~----------~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKT----------PIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred cCcEEEecCCCCCCccCCCC----------CCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHH
Confidence 37899999 55899985321 111222223447888777766544432 4568999999999975544432
Q ss_pred ----HC------CCceeEEEEecCcc
Q 025920 206 ----KY------PHVALGALASSAPI 221 (246)
Q Consensus 206 ----~y------P~~v~g~i~sSap~ 221 (246)
.. +=.++|+++..+.+
T Consensus 185 ~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 185 EISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHhhcccccCCcccceeeEecCCCc
Confidence 22 11457877766543
No 137
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.42 E-value=0.0032 Score=54.92 Aligned_cols=50 Identities=20% Similarity=0.409 Sum_probs=41.0
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC
Q 025920 177 IKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFDD 226 (246)
Q Consensus 177 l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~~ 226 (246)
+.+++..+..+-.++|||+||.+++....++|+.+...++.|+-+.+.++
T Consensus 128 Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~ 177 (264)
T COG2819 128 IEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNE 177 (264)
T ss_pred HhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCH
Confidence 44456666678999999999999999999999999999888876655543
No 138
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.41 E-value=0.00078 Score=59.38 Aligned_cols=107 Identities=17% Similarity=0.101 Sum_probs=67.4
Q ss_pred CcEEEEeCCCCCCCc-ccc--chhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDG-DIS--VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAIL 174 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~-~~~--~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i 174 (246)
.+|+=||--+-+... |.. +..-+.++.+ ++.++=+|.+|+..-.+. -++...|.|.++..+++..++
T Consensus 24 p~ilT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~--------~p~~y~yPsmd~LAe~l~~Vl 93 (283)
T PF03096_consen 24 PAILTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAAT--------LPEGYQYPSMDQLAEMLPEVL 93 (283)
T ss_dssp -EEEEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-------------TT-----HHHHHCTHHHHH
T ss_pred ceEEEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCccc--------ccccccccCHHHHHHHHHHHH
Confidence 445557743333322 211 1234455554 578999999999875431 124668889999999999999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
++++-+ .+|-+|-.-|+.+-+.|+.+||++|.|+|+.+.-
T Consensus 94 ~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~ 133 (283)
T PF03096_consen 94 DHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVNPT 133 (283)
T ss_dssp HHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES--
T ss_pred HhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEecC
Confidence 998765 3999999999999999999999999999998744
No 139
>PRK04940 hypothetical protein; Provisional
Probab=97.40 E-value=0.0012 Score=54.47 Aligned_cols=56 Identities=7% Similarity=0.068 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccC
Q 025920 165 QAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 225 (246)
Q Consensus 165 q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~ 225 (246)
++++-+.+.+..+... + ...++.++|.|+||..|.|++.+|. + .+|+..+.+....
T Consensus 41 ~a~~~l~~~i~~~~~~-~-~~~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~ 96 (180)
T PRK04940 41 HDMQHLLKEVDKMLQL-S-DDERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEE 96 (180)
T ss_pred HHHHHHHHHHHHhhhc-c-CCCCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHH
Confidence 5555555555543321 1 1237999999999999999999997 3 3455566555443
No 140
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.35 E-value=0.0022 Score=53.33 Aligned_cols=82 Identities=17% Similarity=0.235 Sum_probs=62.1
Q ss_pred HHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHH
Q 025920 119 FLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGM 198 (246)
Q Consensus 119 ~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~ 198 (246)
-+.+...+.|..|+.+|-+-|=-+.+ |.+|..+|++++++...++.+ ..+++|+|.|+|+-
T Consensus 20 ~~a~~l~~~G~~VvGvdsl~Yfw~~r-----------------tP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGAD 80 (192)
T PF06057_consen 20 QIAEALAKQGVPVVGVDSLRYFWSER-----------------TPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGAD 80 (192)
T ss_pred HHHHHHHHCCCeEEEechHHHHhhhC-----------------CHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCch
Confidence 45555667899999999776655543 456899999999999888774 45799999999998
Q ss_pred HHHHHHHHCCC----ceeEEEEecC
Q 025920 199 LATWFRLKYPH----VALGALASSA 219 (246)
Q Consensus 199 la~~~~~~yP~----~v~g~i~sSa 219 (246)
+.-....+-|. .|..+++.+.
T Consensus 81 vlP~~~nrLp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 81 VLPFIYNRLPAALRARVAQVVLLSP 105 (192)
T ss_pred hHHHHHhhCCHHHHhheeEEEEecc
Confidence 87777777774 5566665553
No 141
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.31 E-value=0.00095 Score=56.18 Aligned_cols=102 Identities=14% Similarity=0.071 Sum_probs=68.5
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.+-.+|+|||-+....... +-.+..-|.+.|++|..++ ||.+.. -.+.+|.+.|+.+.++.
T Consensus 67 ~klfIfIHGGYW~~g~rk~-clsiv~~a~~~gY~vasvg---Y~l~~q---------------~htL~qt~~~~~~gv~f 127 (270)
T KOG4627|consen 67 AKLFIFIHGGYWQEGDRKM-CLSIVGPAVRRGYRVASVG---YNLCPQ---------------VHTLEQTMTQFTHGVNF 127 (270)
T ss_pred ccEEEEEecchhhcCchhc-ccchhhhhhhcCeEEEEec---cCcCcc---------------cccHHHHHHHHHHHHHH
Confidence 3455778898766554322 2233455778899988874 666632 13567889999988888
Q ss_pred HHHHcCCCCC-CEEEEecChHHHHHHHHHH--HCCCceeEEEEecCc
Q 025920 177 IKEKYNARHS-PVIVVGGSYGGMLATWFRL--KYPHVALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~-p~ilvG~S~GG~la~~~~~--~yP~~v~g~i~sSap 220 (246)
+-+.+. +. .+.+-|||-|+-||+...+ +.| +++|++++++.
T Consensus 128 ilk~~~--n~k~l~~gGHSaGAHLa~qav~R~r~p-rI~gl~l~~Gv 171 (270)
T KOG4627|consen 128 ILKYTE--NTKVLTFGGHSAGAHLAAQAVMRQRSP-RIWGLILLCGV 171 (270)
T ss_pred HHHhcc--cceeEEEcccchHHHHHHHHHHHhcCc-hHHHHHHHhhH
Confidence 766552 33 4566789999999988654 445 56888877654
No 142
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.22 E-value=0.0011 Score=60.14 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=62.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCe---EEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNAL---LVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAI 173 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~---Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~ 173 (246)
.-|+++.||..+....+... .......|+. ++.++.++-....+ .....+|..+-
T Consensus 59 ~~pivlVhG~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~--------------~~~~~~ql~~~---- 116 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPL----DYRLAILGWLTNGVYAFELSGGDGTYS--------------LAVRGEQLFAY---- 116 (336)
T ss_pred CceEEEEccCcCCcchhhhh----hhhhcchHHHhcccccccccccCCCcc--------------ccccHHHHHHH----
Confidence 46999999985555444322 1122334444 77777775511111 01122333333
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC--CceeEEEEecCccc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYP--HVALGALASSAPIL 222 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP--~~v~g~i~sSap~~ 222 (246)
++.+-...+ ..++.++||||||.++.++....+ ..|...+..++|..
T Consensus 117 V~~~l~~~g--a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 117 VDEVLAKTG--AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHhhcC--CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 333322222 358999999999999999999998 78888888888764
No 143
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.20 E-value=0.0018 Score=55.68 Aligned_cols=94 Identities=7% Similarity=0.006 Sum_probs=59.9
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCC--eEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNA--LLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAIL 174 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~--~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i 174 (246)
+..+|++||..-+.+.- .....++....++ .++.+..+..|.-..+. ... -+......++++++
T Consensus 18 ~~vlvfVHGyn~~f~~a---~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~-------~d~----~~a~~s~~~l~~~L 83 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDA---LRRAAQLAHDLGFPGVVILFSWPSDGSLLGYF-------YDR----ESARFSGPALARFL 83 (233)
T ss_pred CeEEEEEeCCCCCHHHH---HHHHHHHHHHhCCCceEEEEEcCCCCChhhhh-------hhh----hhHHHHHHHHHHHH
Confidence 46678888876654332 1233444444443 69999999877522110 000 13456677788888
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
+.+.+.. ...++.+++||||+.+.......
T Consensus 84 ~~L~~~~--~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 84 RDLARAP--GIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred HHHHhcc--CCceEEEEEeCchHHHHHHHHHH
Confidence 8887653 34589999999999999886543
No 144
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.15 E-value=0.00096 Score=61.68 Aligned_cols=57 Identities=18% Similarity=0.232 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC------ceeEEEEecCccccc
Q 025920 165 QAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH------VALGALASSAPILYF 224 (246)
Q Consensus 165 q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~------~v~g~i~sSap~~~~ 224 (246)
+....+..+|+.+.+.. +.|++|+||||||.++..+....+. .|++.|..++|..-.
T Consensus 101 ~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 56677777788776543 5699999999999999999988864 478999999987543
No 145
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.12 E-value=0.0019 Score=51.36 Aligned_cols=56 Identities=20% Similarity=0.143 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC----ceeEEEEecCccccc
Q 025920 167 ITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH----VALGALASSAPILYF 224 (246)
Q Consensus 167 l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~----~v~g~i~sSap~~~~ 224 (246)
..++...++....++ +..+++++|||+||.+|..++...+. ....+++.++|-.-.
T Consensus 11 ~~~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~ 70 (153)
T cd00741 11 ANLVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGN 70 (153)
T ss_pred HHHHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccc
Confidence 344444455544433 45689999999999999998877654 556777777776433
No 146
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.05 E-value=0.0034 Score=61.82 Aligned_cols=55 Identities=22% Similarity=0.203 Sum_probs=33.0
Q ss_pred CEEEEecChHHHHHHHHHH---HCCCceeEEEEecCcccccCC-C-CChhhHHHHHHHHH
Q 025920 187 PVIVVGGSYGGMLATWFRL---KYPHVALGALASSAPILYFDD-I-TPQNGYYSIVTRDF 241 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~---~yP~~v~g~i~sSap~~~~~~-~-~~~~~~~~~v~~~~ 241 (246)
.|+++||||||++|..+.. .+++.|.-+|..|+|+.+..= + ...-.||..+.+--
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~D~~l~~fy~~vnn~W 242 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPLDRFLLRFYLLVNNYW 242 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCCcHHHHHHHHHHHHHH
Confidence 3999999999999877653 134445555566777654421 1 11345555554443
No 147
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.94 E-value=0.0082 Score=48.74 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=47.5
Q ss_pred CCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-
Q 025920 128 NALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK- 206 (246)
Q Consensus 128 g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~- 206 (246)
+..|+.+|.+|+|.+.+... +.+...+++. +.+.... +..|++++|||+||.++..++.+
T Consensus 25 ~~~v~~~~~~g~~~~~~~~~--------------~~~~~~~~~~---~~l~~~~--~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 25 RRDVSALPLPGFGPGEPLPA--------------SADALVEAQA---EAVLRAA--GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred CccEEEecCCCCCCCCCCCC--------------CHHHHHHHHH---HHHHHhc--CCCCeEEEEECHHHHHHHHHHHHH
Confidence 46899999999987754221 2233333333 2333222 24589999999999999888775
Q ss_pred --CCCceeEEEEecC
Q 025920 207 --YPHVALGALASSA 219 (246)
Q Consensus 207 --yP~~v~g~i~sSa 219 (246)
.++.+.++++..+
T Consensus 86 ~~~~~~~~~l~~~~~ 100 (212)
T smart00824 86 EARGIPPAAVVLLDT 100 (212)
T ss_pred HhCCCCCcEEEEEcc
Confidence 4556777765543
No 148
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.93 E-value=0.013 Score=55.51 Aligned_cols=114 Identities=16% Similarity=0.119 Sum_probs=64.1
Q ss_pred CCcEEEE-eCCCCCCCccccchhHHHHHHHHcCCeEEEEccc----cccCCCCCCChhhhhcccccCCCCCHHHHHHHHH
Q 025920 97 IAPIFVY-LGAEEALDGDISVIGFLTDNAARFNALLVYIEHR----YYGKSIPFGSREEALKNASTLGYFNSAQAITDYA 171 (246)
Q Consensus 97 ~~PI~l~-hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~R----g~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~ 171 (246)
+-||+++ |||.-....-......-..++...+..||.+.+| ||-.+.-... ...| ..+.|..
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~------~~gN-------~Gl~Dq~ 190 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDA------PSGN-------YGLLDQR 190 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTS------HBST-------HHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccccccccccc------Cchh-------hhhhhhH
Confidence 3577654 5554322211000012234566778999999999 4433221100 0012 4688888
Q ss_pred HHHHHHHHHc---CCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCcccc
Q 025920 172 AILLYIKEKY---NARHSPVIVVGGSYGGMLATWFRLK--YPHVALGALASSAPILY 223 (246)
Q Consensus 172 ~~i~~l~~~~---~~~~~p~ilvG~S~GG~la~~~~~~--yP~~v~g~i~sSap~~~ 223 (246)
..+++++++- +-+..+|.|+|+|-||+.+..+... -...+.++|+.|+....
T Consensus 191 ~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 191 LALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred HHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 8888888654 3344589999999999988887765 23578999998875443
No 149
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.89 E-value=0.0024 Score=54.07 Aligned_cols=55 Identities=18% Similarity=0.304 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccC
Q 025920 170 YAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 225 (246)
Q Consensus 170 ~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~ 225 (246)
+.+.+++++++......++.|+|.|.||-+|+.++.++| .|.++|+.+++...+.
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--S
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEec
Confidence 445567777665555568999999999999999999999 5688888776654443
No 150
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.88 E-value=0.0037 Score=54.49 Aligned_cols=90 Identities=21% Similarity=0.237 Sum_probs=58.2
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
.-||++++.|..-...++ ...+.+++ ..|+.|++++.-. ...|.+ .+-+++.++++++
T Consensus 45 ~yPVilF~HG~~l~ns~Y--s~lL~HIA-SHGfIVVAPQl~~--~~~p~~-----------------~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFY--SQLLAHIA-SHGFIVVAPQLYT--LFPPDG-----------------QDEIKSAASVINW 102 (307)
T ss_pred CccEEEEeechhhhhHHH--HHHHHHHh-hcCeEEEechhhc--ccCCCc-----------------hHHHHHHHHHHHH
Confidence 357766654443333333 24555555 4699999998753 222311 1456788888888
Q ss_pred HHHHcC--------CCCCCEEEEecChHHHHHHHHHHHCC
Q 025920 177 IKEKYN--------ARHSPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 177 l~~~~~--------~~~~p~ilvG~S~GG~la~~~~~~yP 208 (246)
+.+.+. .+-.++.++|||.||-.|..+++.|-
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 776542 22348999999999999999988774
No 151
>COG0627 Predicted esterase [General function prediction only]
Probab=96.87 E-value=0.007 Score=54.47 Aligned_cols=123 Identities=18% Similarity=0.131 Sum_probs=68.3
Q ss_pred CCcEEEEeCCCCCCC-ccccchhHHHHHHHHcCCeEEEE--ccccccCCCC----CCChhhh-hcccccC----CCCCHH
Q 025920 97 IAPIFVYLGAEEALD-GDISVIGFLTDNAARFNALLVYI--EHRYYGKSIP----FGSREEA-LKNASTL----GYFNSA 164 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~-~~~~~~~~~~~~a~~~g~~Vi~~--D~Rg~G~S~p----~~~~~~~-~~~~~~~----~ylt~~ 164 (246)
.-||+++.+|..... .+.. .+-+...+.+.|+.+++. +.|+.|+-.. .+... + +.|.... .-+..+
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~-~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~-sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYL-LDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGA-SFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCEEEEeCCCCCCCCceEe-ccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCcc-ceecccccCccccCccchh
Confidence 467777776666543 3332 334566677788888885 4455554322 11100 0 1111110 001111
Q ss_pred H-HHHHHHHHHHHHHHHcCCCC--CCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 165 Q-AITDYAAILLYIKEKYNARH--SPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 165 q-~l~D~~~~i~~l~~~~~~~~--~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
. .+.++... +.+.+.... ..-.++||||||.=|+.+++++|+.+..+...|+.+...
T Consensus 131 tfl~~ELP~~---~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPAL---WEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHH---HHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 1 23333322 233333222 267899999999999999999999998887777655444
No 152
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.86 E-value=0.006 Score=52.86 Aligned_cols=118 Identities=17% Similarity=0.282 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHc----CCeEEEEccccccCCCCC-CChhhhhccc-ccCCC----CCHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARF----NALLVYIEHRYYGKSIPF-GSREEALKNA-STLGY----FNSAQA 166 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~----g~~Vi~~D~Rg~G~S~p~-~~~~~~~~~~-~~~~y----lt~~q~ 166 (246)
--|.+++||..|.....- +.+.++..+. ...++.+|--| |..+ +..+...+++ -..++ -+..+.
T Consensus 45 ~iPTIfIhGsgG~asS~~---~Mv~ql~~~~~~~~e~Lt~~V~~dg---slk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIPTIFIHGSGGTASSLN---GMVNQLLPDYKAGTESLTMTVDVDG---SLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccceEEEecCCCChhHHH---HHHHHhhhcccccccceEEEEcCCC---cEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 468999999999887753 3444544443 24577777666 3211 1100000000 00000 022233
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-----ceeEEEEecCccc
Q 025920 167 ITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH-----VALGALASSAPIL 222 (246)
Q Consensus 167 l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~-----~v~g~i~sSap~~ 222 (246)
..-+..++.+|+++++.+ ++-++||||||.-...|+..|.+ .+...|...+|..
T Consensus 119 s~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 555667788889888765 58999999999999999988764 3567788888876
No 153
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.85 E-value=0.0045 Score=54.15 Aligned_cols=116 Identities=14% Similarity=0.058 Sum_probs=70.8
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCC---CCChhhh---h---cccccCCCCCHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIP---FGSREEA---L---KNASTLGYFNSAQAI 167 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p---~~~~~~~---~---~~~~~~~ylt~~q~l 167 (246)
-.-|+-+||-.|....+..+. .++ ..|+.|+.+|-||.|.|.- -...+++ + ...++...+-.....
T Consensus 83 ~P~vV~fhGY~g~~g~~~~~l----~wa-~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~ 157 (321)
T COG3458 83 LPAVVQFHGYGGRGGEWHDML----HWA-VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVF 157 (321)
T ss_pred cceEEEEeeccCCCCCccccc----ccc-ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeeh
Confidence 355788998777665332211 222 3589999999999998732 1000000 0 000111111122346
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025920 168 TDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASS 218 (246)
Q Consensus 168 ~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sS 218 (246)
.|+...++.+..-...+..++.+.|+|-||.|++..+...|.+ +++++.-
T Consensus 158 ~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~ri-k~~~~~~ 207 (321)
T COG3458 158 LDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRI-KAVVADY 207 (321)
T ss_pred HHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhh-hcccccc
Confidence 6777777766655555677999999999999999999888754 6666543
No 154
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=96.82 E-value=0.014 Score=47.47 Aligned_cols=109 Identities=21% Similarity=0.259 Sum_probs=64.3
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccc-----cCCCCCCChhhhhcccccCCCCCHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYY-----GKSIPFGSREEALKNASTLGYFNSAQAITDYA 171 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~-----G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~ 171 (246)
...|++-||..++.++-.. ..........|+.|.-+|.+|- |...|.+. -+-++. ..+..
T Consensus 14 ~~tilLaHGAGasmdSt~m--~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~----------~~t~~~-~~~~~-- 78 (213)
T COG3571 14 PVTILLAHGAGASMDSTSM--TAVAAALARRGWLVARFEFPYMAARRTGRRKPPPG----------SGTLNP-EYIVA-- 78 (213)
T ss_pred CEEEEEecCCCCCCCCHHH--HHHHHHHHhCceeEEEeecchhhhccccCCCCcCc----------cccCCH-HHHHH--
Confidence 3567777887777655321 1222233356899998887664 43333211 111111 12222
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 172 AILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
+.++++.+ ...|.++=|+||||.++...+..---.|++++..+=|+...
T Consensus 79 --~aql~~~l--~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 79 --IAQLRAGL--AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred --HHHHHhcc--cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 23344433 23489999999999999998876444488999888776543
No 155
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.81 E-value=0.0036 Score=58.07 Aligned_cols=120 Identities=15% Similarity=0.006 Sum_probs=85.5
Q ss_pred CCCcEEEEeCCCCCCCccccch--hHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCC--CHHH-HHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVI--GFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYF--NSAQ-AITDY 170 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~--~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~yl--t~~q-~l~D~ 170 (246)
+++||++.||-..++..|..+. .-+.-+....||.|-.-.-||---|...-.+ +...+.++. +.++ +..|+
T Consensus 72 ~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l----~~~~~~~FW~FS~~Em~~yDL 147 (403)
T KOG2624|consen 72 KRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL----SPSSDKEFWDFSWHEMGTYDL 147 (403)
T ss_pred CCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc----CCcCCcceeecchhhhhhcCH
Confidence 4678899999998888776442 2344556778999999999997667543221 111122233 4444 57899
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEecCcc
Q 025920 171 AAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH---VALGALASSAPI 221 (246)
Q Consensus 171 ~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~---~v~g~i~sSap~ 221 (246)
.+.|+++-+.-+ ..++..+|||-|+.....+....|+ +++..++.++++
T Consensus 148 PA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 148 PAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 999999887653 4579999999999999888887776 677777776554
No 156
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.80 E-value=0.0013 Score=55.57 Aligned_cols=126 Identities=19% Similarity=0.188 Sum_probs=69.2
Q ss_pred CCcEEEEeCCCCCC-CccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCC-C--CHHH-----HH
Q 025920 97 IAPIFVYLGAEEAL-DGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGY-F--NSAQ-----AI 167 (246)
Q Consensus 97 ~~PI~l~hGg~g~~-~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~y-l--t~~q-----~l 167 (246)
.-|++++..|-... +.+.. ...+.+.|.+.|..|+.+|--=-|.-....+ +++.-....++ + |.|- -+
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~-Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~--eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIE-KSGFQQQASKHGLAVVAPDTSPRGVEVAGDD--ESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred cCceEEEecCCcccchhhHh-hhhHHHhHhhcCeEEECCCCCCCccccCCCc--ccccccCCceeEEecccchHhhhhhH
Confidence 46899988665554 44443 3456677888999999998643332221110 01100011111 1 1111 12
Q ss_pred HHHH--HHHHHHH-HHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC
Q 025920 168 TDYA--AILLYIK-EKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFDD 226 (246)
Q Consensus 168 ~D~~--~~i~~l~-~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~~ 226 (246)
-|+. ++.+.+. .....+-.++-++||||||.=|+...+|.|.+.+.+=+ =||+....+
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSA-FAPI~NP~~ 180 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSA-FAPICNPIN 180 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceec-cccccCccc
Confidence 2222 2222222 12223444789999999999999999999998655443 367765544
No 157
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.79 E-value=0.0029 Score=49.11 Aligned_cols=52 Identities=23% Similarity=0.330 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC----C--ceeEEEEecCccc
Q 025920 169 DYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYP----H--VALGALASSAPIL 222 (246)
Q Consensus 169 D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP----~--~v~g~i~sSap~~ 222 (246)
.+..-++.+.+++. +.++++.|||+||.+|..++.... . ....+++.++|-.
T Consensus 49 ~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 49 QILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 44444455555553 457999999999999998766522 1 3345666666654
No 158
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.77 E-value=0.0052 Score=50.72 Aligned_cols=58 Identities=16% Similarity=0.115 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 163 SAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 163 ~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
.+....++..|++.|.... .+...+.++|||||+.++...+...+..++.+|+.++|=
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 4566788999999888765 456689999999999999998887677788888766663
No 159
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.75 E-value=0.0045 Score=52.57 Aligned_cols=55 Identities=22% Similarity=0.259 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC-----CCceeEEEEecCccc
Q 025920 165 QAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKY-----PHVALGALASSAPIL 222 (246)
Q Consensus 165 q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~y-----P~~v~g~i~sSap~~ 222 (246)
....++...++.+++++ ++.++++.|||+||++|..++... +..+ .++..++|-.
T Consensus 109 ~~~~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i-~~~tFg~P~v 168 (229)
T cd00519 109 SLYNQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDV-TVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCce-EEEEeCCCCC
Confidence 34455555555555554 456899999999999998876542 3334 4555555543
No 160
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.67 E-value=0.0079 Score=54.73 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=61.6
Q ss_pred CCcEEEEe-CCCCCCCccccchhHHHHHHHHcCCeEEEEccccc--cCCCCCCChhhhhcccccCCCC--CHHHHHHHHH
Q 025920 97 IAPIFVYL-GAEEALDGDISVIGFLTDNAARFNALLVYIEHRYY--GKSIPFGSREEALKNASTLGYF--NSAQAITDYA 171 (246)
Q Consensus 97 ~~PI~l~h-Gg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~--G~S~p~~~~~~~~~~~~~~~yl--t~~q~l~D~~ 171 (246)
.-||+++- |..+....+ .++.+-..+.|+.|..+||+|- |..... +.... +|. -..+-..|+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f----~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~------~~~~~--~~~p~~~~erp~dis 137 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGF----AWLAEHLASYGFVVAAPDHPGSNAGGAPAA------YAGPG--SYAPAEWWERPLDIS 137 (365)
T ss_pred cCCeEEecCCCCCCccch----hhhHHHHhhCceEEEeccCCCcccccCChh------hcCCc--ccchhhhhcccccHH
Confidence 46777765 544444433 2555556678999999999983 433221 11100 111 1123467888
Q ss_pred HHHHHHHHH-----cC--CCCCCEEEEecChHHHHHHHHHHHCC
Q 025920 172 AILLYIKEK-----YN--ARHSPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 172 ~~i~~l~~~-----~~--~~~~p~ilvG~S~GG~la~~~~~~yP 208 (246)
.+++.+.+. +. .+..||.++|||+||..++..+.-..
T Consensus 138 ~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 138 ALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred HHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 888888766 21 13348999999999999988654433
No 161
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.52 E-value=0.02 Score=55.55 Aligned_cols=153 Identities=22% Similarity=0.240 Sum_probs=87.3
Q ss_pred CCceeeEEEeecCC-CCCCCCCCCeEEEEEEEecc---------ccCCCCCCCCCCcEEEEe-CCCCCCCc-cccchhHH
Q 025920 53 EDFQTFYYNQTLDH-FNYRPESYSTFQQRYVINFK---------YWGGGAGADAIAPIFVYL-GAEEALDG-DISVIGFL 120 (246)
Q Consensus 53 ~~~~~~~~~q~lDh-f~~~p~~~~tF~qry~~~~~---------~~~~g~~~~~~~PI~l~h-Gg~g~~~~-~~~~~~~~ 120 (246)
.+-.+.-.+|++-- |+ |+ ..+.+|.|+... .|+....-+..+|+++|- |.-|.+.. .+. ...+
T Consensus 397 t~er~~LkqqeV~~g~d--p~--~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs-~~~l 471 (682)
T COG1770 397 TGERTLLKQQEVPGGFD--PE--DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFS-IARL 471 (682)
T ss_pred CCcEEEEEeccCCCCCC--hh--HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcc-ccee
Confidence 34444556677654 54 53 467788888732 233210011246888877 66554432 111 1111
Q ss_pred HHHHHHcCCeEEEEcc-ccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHH
Q 025920 121 TDNAARFNALLVYIEH-RYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGML 199 (246)
Q Consensus 121 ~~~a~~~g~~Vi~~D~-Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~l 199 (246)
-+. ..| -|+++=| ||=|.=.. .. + ++-+.++-.+...|+.+..++|.++--.....++++|+|-||+|
T Consensus 472 -SLl-DRG-fiyAIAHVRGGgelG~--~W---Y---e~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmL 540 (682)
T COG1770 472 -SLL-DRG-FVYAIAHVRGGGELGR--AW---Y---EDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGML 540 (682)
T ss_pred -eee-cCc-eEEEEEEeecccccCh--HH---H---HhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHH
Confidence 111 223 4555555 55443221 00 1 11222333355777777777776654444458999999999999
Q ss_pred HHHHHHHCCCceeEEEEecCcc
Q 025920 200 ATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 200 a~~~~~~yP~~v~g~i~sSap~ 221 (246)
....+-..|+.+.|+|+-.+-+
T Consensus 541 mGav~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 541 MGAVANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred HHHHHhhChhhhhheeecCCcc
Confidence 9999999999999999876433
No 162
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.46 E-value=0.011 Score=55.81 Aligned_cols=115 Identities=22% Similarity=0.187 Sum_probs=65.4
Q ss_pred CCcE-EEEeCCCCCCCccccchhHHHHHHH------------------HcCCeEEEEc-cccccCCCCCCChhhhhcccc
Q 025920 97 IAPI-FVYLGAEEALDGDISVIGFLTDNAA------------------RFNALLVYIE-HRYYGKSIPFGSREEALKNAS 156 (246)
Q Consensus 97 ~~PI-~l~hGg~g~~~~~~~~~~~~~~~a~------------------~~g~~Vi~~D-~Rg~G~S~p~~~~~~~~~~~~ 156 (246)
+.|| |.+.||+|+++.+. .+.++.+ -..+.+|++| .-|.|-|.-.++. .
T Consensus 100 ~rPvi~wlNGGPGcSS~~g----~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e-------~ 168 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTG----LLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDE-------K 168 (498)
T ss_pred CCceEEEecCCCChHhhhh----hhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccc-------c
Confidence 4565 55669999887642 2322211 1136799999 5588988642221 1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHcC---CCCCCEEEEecChHHHHHHHHHHHCC---CceeEEEEecCcccccC
Q 025920 157 TLGYFNSAQAITDYAAILLYIKEKYN---ARHSPVIVVGGSYGGMLATWFRLKYP---HVALGALASSAPILYFD 225 (246)
Q Consensus 157 ~~~ylt~~q~l~D~~~~i~~l~~~~~---~~~~p~ilvG~S~GG~la~~~~~~yP---~~v~g~i~sSap~~~~~ 225 (246)
.. +.+.+-+|+..+.+.+-+.+. -..+|++|+|-||||.-+..++..-- ....+.+..++.+....
T Consensus 169 ~~---d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 169 KK---DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred cc---chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 11 223445555555554443321 12348999999999998888764322 23456666665554444
No 163
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.34 E-value=0.011 Score=48.60 Aligned_cols=56 Identities=18% Similarity=0.147 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 162 NSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 162 t~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
..+|.++-+.+-+.. ...|+++|+||.|+.+++.++...-..|.|+++.++|-...
T Consensus 42 ~~~dWi~~l~~~v~a-------~~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~ 97 (181)
T COG3545 42 VLDDWIARLEKEVNA-------AEGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSR 97 (181)
T ss_pred CHHHHHHHHHHHHhc-------cCCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccc
Confidence 445555554433332 23479999999999999999988777899999988775443
No 164
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.33 E-value=0.0092 Score=56.12 Aligned_cols=90 Identities=21% Similarity=0.191 Sum_probs=55.2
Q ss_pred HHHHHHcCCeEEEEcccc--cc---CCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHH---cCCCCCCEEEEe
Q 025920 121 TDNAARFNALLVYIEHRY--YG---KSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEK---YNARHSPVIVVG 192 (246)
Q Consensus 121 ~~~a~~~g~~Vi~~D~Rg--~G---~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~---~~~~~~p~ilvG 192 (246)
..++++-++.||.+++|= +| .|.-.... ....| -.+.|+...+++++++ ++-+...|.|+|
T Consensus 118 s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~----~~~~n-------~Gl~DqilALkWV~~NIe~FGGDp~NVTl~G 186 (491)
T COG2272 118 SALAARGDVVVVSVNYRLGALGFLDLSSLDTED----AFASN-------LGLLDQILALKWVRDNIEAFGGDPQNVTLFG 186 (491)
T ss_pred HHHHhcCCEEEEEeCcccccceeeehhhccccc----ccccc-------ccHHHHHHHHHHHHHHHHHhCCCccceEEee
Confidence 456666668999999991 11 11100000 00112 2466777666766654 444556799999
Q ss_pred cChHHHHHHHHHHHCCC---ceeEEEEecCccc
Q 025920 193 GSYGGMLATWFRLKYPH---VALGALASSAPIL 222 (246)
Q Consensus 193 ~S~GG~la~~~~~~yP~---~v~g~i~sSap~~ 222 (246)
+|-|++.++++.+ .|+ .+..+|+.|++..
T Consensus 187 eSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 187 ESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 9999999888765 454 5667777776654
No 165
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.27 E-value=0.014 Score=53.90 Aligned_cols=54 Identities=28% Similarity=0.333 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHcCCC--CCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 168 TDYAAILLYIKEKYNAR--HSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 168 ~D~~~~i~~l~~~~~~~--~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
-|....+.+++..+... +.|+|++|+|+||.||...+.-.|..++++|=-|+-.
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 46666666677666433 3599999999999999999999999999999655443
No 166
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.25 E-value=0.19 Score=45.10 Aligned_cols=136 Identities=12% Similarity=0.084 Sum_probs=76.9
Q ss_pred EEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEcccc--ccCCCCCC--Chh-----
Q 025920 79 QRYVINFKYWGGGAGADAIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRY--YGKSIPFG--SRE----- 149 (246)
Q Consensus 79 qry~~~~~~~~~g~~~~~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg--~G~S~p~~--~~~----- 149 (246)
++|..-.+-|.. +++.+-||++||...+..+- ...+.+.+-....|+..+.+..+. ...+.... ..+
T Consensus 72 ~~flaL~~~~~~---~~~~G~vIilp~~g~~~d~p-~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~ 147 (310)
T PF12048_consen 72 ERFLALWRPANS---AKPQGAVIILPDWGEHPDWP-GLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAG 147 (310)
T ss_pred EEEEEEEecccC---CCCceEEEEecCCCCCCCcH-hHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCC
Confidence 344443333443 34567889999877666532 234677777788999999998887 22111000 000
Q ss_pred -hhhccc-ccC---------CCC-CHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc-eeEEEE
Q 025920 150 -EALKNA-STL---------GYF-NSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHV-ALGALA 216 (246)
Q Consensus 150 -~~~~~~-~~~---------~yl-t~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~-v~g~i~ 216 (246)
...... ... .+. ..+...+-+...+..++.+ +..+++|+||+.|+.+++.+..+.+.. ++++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~ 224 (310)
T PF12048_consen 148 DQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVL 224 (310)
T ss_pred CCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEE
Confidence 000000 000 000 1123333444444444433 223499999999999999999887754 788888
Q ss_pred ecCcc
Q 025920 217 SSAPI 221 (246)
Q Consensus 217 sSap~ 221 (246)
.++-.
T Consensus 225 I~a~~ 229 (310)
T PF12048_consen 225 INAYW 229 (310)
T ss_pred EeCCC
Confidence 77643
No 167
>PLN02454 triacylglycerol lipase
Probab=96.07 E-value=0.04 Score=51.19 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025920 165 QAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 165 q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
.+.+++...++.+.+++...+.++++.|||+||+||+..+..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345556566677777664333459999999999999998743
No 168
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.05 E-value=0.014 Score=56.00 Aligned_cols=84 Identities=14% Similarity=-0.011 Sum_probs=62.3
Q ss_pred HHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHH
Q 025920 125 ARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFR 204 (246)
Q Consensus 125 ~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~ 204 (246)
...||.||..|.||-|.|...-. .+.+ |-++|-...|+++.++- .-+.+|-.+|.||+|+...+.+
T Consensus 77 aa~GYavV~qDvRG~~~SeG~~~-----------~~~~--~E~~Dg~D~I~Wia~Qp-WsNG~Vgm~G~SY~g~tq~~~A 142 (563)
T COG2936 77 AAQGYAVVNQDVRGRGGSEGVFD-----------PESS--REAEDGYDTIEWLAKQP-WSNGNVGMLGLSYLGFTQLAAA 142 (563)
T ss_pred ecCceEEEEecccccccCCcccc-----------eecc--ccccchhHHHHHHHhCC-ccCCeeeeecccHHHHHHHHHH
Confidence 45699999999999999975221 1112 45678888888887642 3355899999999999999999
Q ss_pred HHCCCceeEEEEecCccc
Q 025920 205 LKYPHVALGALASSAPIL 222 (246)
Q Consensus 205 ~~yP~~v~g~i~sSap~~ 222 (246)
+..|..+++++-.++...
T Consensus 143 a~~pPaLkai~p~~~~~D 160 (563)
T COG2936 143 ALQPPALKAIAPTEGLVD 160 (563)
T ss_pred hcCCchheeecccccccc
Confidence 888777677665555443
No 169
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.05 E-value=0.56 Score=44.31 Aligned_cols=113 Identities=19% Similarity=0.190 Sum_probs=67.6
Q ss_pred CCcE-EEEeCCCCCCCccccchhHHHHHHH-----------------HcCCeEEEEccc-cccCCCCCCChhhhhccccc
Q 025920 97 IAPI-FVYLGAEEALDGDISVIGFLTDNAA-----------------RFNALLVYIEHR-YYGKSIPFGSREEALKNAST 157 (246)
Q Consensus 97 ~~PI-~l~hGg~g~~~~~~~~~~~~~~~a~-----------------~~g~~Vi~~D~R-g~G~S~p~~~~~~~~~~~~~ 157 (246)
..|+ +.+.||+|.++.. |.+.|+.+ ..-++|+.+|+| |.|-|--... ..
T Consensus 72 ~dPlvLWLnGGPGCSSl~----G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~--------~~ 139 (454)
T KOG1282|consen 72 TDPLVLWLNGGPGCSSLG----GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTS--------SD 139 (454)
T ss_pred CCCEEEEeCCCCCccchh----hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCC--------Cc
Confidence 3555 4566999987542 33333211 113679999998 7887752110 11
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHH----HHHHHHHHHC-----CC-ceeEEEEecCccc
Q 025920 158 LGYFNSAQAITDYAAILLYIKEKYN-ARHSPVIVVGGSYGG----MLATWFRLKY-----PH-VALGALASSAPIL 222 (246)
Q Consensus 158 ~~ylt~~q~l~D~~~~i~~l~~~~~-~~~~p~ilvG~S~GG----~la~~~~~~y-----P~-~v~g~i~sSap~~ 222 (246)
.. .+-+...+|.-.++...-+++. ..+.++++.|-||+| +||....... |. .++|.++..+-+.
T Consensus 140 ~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 140 YK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTD 214 (454)
T ss_pred Cc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccC
Confidence 11 2345667787776665544443 245689999999999 6666666543 22 3577777665443
No 170
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.04 E-value=0.017 Score=49.37 Aligned_cols=53 Identities=25% Similarity=0.219 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC----CceeEEEEecCccccc
Q 025920 169 DYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYP----HVALGALASSAPILYF 224 (246)
Q Consensus 169 D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP----~~v~g~i~sSap~~~~ 224 (246)
...++++.+..++. .++++.|||.||.+|...+...+ +++..++...+|=+..
T Consensus 70 ~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 70 SALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 33455566655542 36999999999999999988743 4677888777775433
No 171
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.03 E-value=0.049 Score=48.31 Aligned_cols=83 Identities=24% Similarity=0.221 Sum_probs=54.3
Q ss_pred HHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHH
Q 025920 124 AARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNA-RHSPVIVVGGSYGGMLATW 202 (246)
Q Consensus 124 a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~-~~~p~ilvG~S~GG~la~~ 202 (246)
....|+.|++.|+.|.|. |+... .+.-.++-|..+-.+.+....+. .+.+|.++|+|=||.-+.|
T Consensus 22 ~L~~GyaVv~pDY~Glg~--~y~~~------------~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~ 87 (290)
T PF03583_consen 22 WLARGYAVVAPDYEGLGT--PYLNG------------RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALW 87 (290)
T ss_pred HHHCCCEEEecCCCCCCC--cccCc------------HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHH
Confidence 346799999999999997 44211 12234566665555555443222 3568999999999998877
Q ss_pred HHHH----CCCc---eeEEEEecCc
Q 025920 203 FRLK----YPHV---ALGALASSAP 220 (246)
Q Consensus 203 ~~~~----yP~~---v~g~i~sSap 220 (246)
.+.. .||. +.|+++.++|
T Consensus 88 AA~l~~~YApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 88 AAELAPSYAPELNRDLVGAAAGGPP 112 (290)
T ss_pred HHHHhHHhCcccccceeEEeccCCc
Confidence 6533 3554 5677766554
No 172
>PLN02606 palmitoyl-protein thioesterase
Probab=96.01 E-value=0.2 Score=44.71 Aligned_cols=109 Identities=14% Similarity=0.066 Sum_probs=69.0
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHc-CCeEEEEccccccCCCCCCChhhhhcccccCCC-CCHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARF-NALLVYIEHRYYGKSIPFGSREEALKNASTLGY-FNSAQAITDYAAILL 175 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~-g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~y-lt~~q~l~D~~~~i~ 175 (246)
-|||+.||-..+.... ..+.+.+++.+. +.-+..++ .|=|.. -++ .+..+.++.+.+-+.
T Consensus 27 ~PvViwHGlgD~~~~~--~~~~~~~~i~~~~~~pg~~v~-ig~~~~---------------~s~~~~~~~Qv~~vce~l~ 88 (306)
T PLN02606 27 VPFVLFHGFGGECSNG--KVSNLTQFLINHSGYPGTCVE-IGNGVQ---------------DSLFMPLRQQASIACEKIK 88 (306)
T ss_pred CCEEEECCCCcccCCc--hHHHHHHHHHhCCCCCeEEEE-ECCCcc---------------cccccCHHHHHHHHHHHHh
Confidence 7899999987555432 123455666433 55455554 221110 122 233445555555555
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecCcccccCCCC
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH--VALGALASSAPILYFDDIT 228 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~--~v~g~i~sSap~~~~~~~~ 228 (246)
...+ +. .-+.++|.|=||.++-.+..+.|+ .|+-.|..++|..-..++.
T Consensus 89 ~~~~-L~---~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p 139 (306)
T PLN02606 89 QMKE-LS---EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIP 139 (306)
T ss_pred cchh-hc---CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCc
Confidence 4332 21 249999999999999999999988 4999999999987766654
No 173
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.95 E-value=0.0065 Score=56.77 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc--------eeEEEEecCccccc
Q 025920 164 AQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHV--------ALGALASSAPILYF 224 (246)
Q Consensus 164 ~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~--------v~g~i~sSap~~~~ 224 (246)
++.+..++..|+..-+.. ...|++|++|||||.+...|...+++. +++.+..++|.+-.
T Consensus 162 d~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG~ 228 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLGS 228 (473)
T ss_pred HHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcCC
Confidence 467888888888776654 236899999999999999999999882 34555666665433
No 174
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=95.88 E-value=0.033 Score=49.81 Aligned_cols=39 Identities=23% Similarity=0.187 Sum_probs=28.8
Q ss_pred CCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 185 HSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 185 ~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
.+++.|+|||+||+.++....+.-+ ++.+|+.-+=++..
T Consensus 240 ~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~WM~Pl 278 (399)
T KOG3847|consen 240 TSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDAWMFPL 278 (399)
T ss_pred hhhhhheeccccchhhhhhhccccc-eeeeeeeeeeeccc
Confidence 3478999999999999888776544 57777766644443
No 175
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=95.79 E-value=0.084 Score=48.50 Aligned_cols=52 Identities=27% Similarity=0.330 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH--CCCc---eeEEEEecC
Q 025920 166 AITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK--YPHV---ALGALASSA 219 (246)
Q Consensus 166 ~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~--yP~~---v~g~i~sSa 219 (246)
.+.++.+..+++.+..+ ...++|+|-|-||.|++.+.+. .++. -+++|+.|+
T Consensus 177 QL~qlv~~Y~~Lv~~~G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 177 QLRQLVATYDYLVESEG--NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred HHHHHHHHHHHHHhccC--CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 34455555555553332 4579999999999999987542 2121 257787774
No 176
>PLN02310 triacylglycerol lipase
Probab=95.79 E-value=0.025 Score=52.42 Aligned_cols=57 Identities=21% Similarity=0.370 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH----HCCCceeEEEEecCccc
Q 025920 164 AQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRL----KYPHVALGALASSAPIL 222 (246)
Q Consensus 164 ~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~----~yP~~v~g~i~sSap~~ 222 (246)
+|.++.+.++++..+.+ .++.++++.|||+||+||+..+. ..|..-..++..++|-.
T Consensus 189 ~qVl~eV~~L~~~y~~~--~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGK--GEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHhhccc--CCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 45555555554443221 13457999999999999988763 24554345667777754
No 177
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=95.78 E-value=0.085 Score=49.10 Aligned_cols=105 Identities=7% Similarity=-0.042 Sum_probs=68.6
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.||+++-.--+..... ..+.+..+ .. |+.|+..|...-+.... .-+.++.++.++-+.++++.+
T Consensus 103 ~pvLiV~Pl~g~~~~L--~RS~V~~L-l~-g~dVYl~DW~~p~~vp~------------~~~~f~ldDYi~~l~~~i~~~ 166 (406)
T TIGR01849 103 PAVLIVAPMSGHYATL--LRSTVEAL-LP-DHDVYITDWVNARMVPL------------SAGKFDLEDYIDYLIEFIRFL 166 (406)
T ss_pred CcEEEEcCCchHHHHH--HHHHHHHH-hC-CCcEEEEeCCCCCCCch------------hcCCCCHHHHHHHHHHHHHHh
Confidence 5777776544433222 23344444 34 89999999987764421 224566777775444555544
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHC-----CCceeEEEEecCcccccC
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKY-----PHVALGALASSAPILYFD 225 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~y-----P~~v~g~i~sSap~~~~~ 225 (246)
+ .++.++|.++||.+++.+.+.. |..++.+++..+|+....
T Consensus 167 G-------~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 167 G-------PDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred C-------CCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 2 2489999999999976655443 667899999999997654
No 178
>COG3150 Predicted esterase [General function prediction only]
Probab=95.61 E-value=0.039 Score=45.07 Aligned_cols=93 Identities=16% Similarity=0.240 Sum_probs=58.6
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHH
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKE 179 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~ 179 (246)
|+.+||..++..+.. +.+..+ -+..|.|..+-|.|... -...|+++.+..+|...+.
T Consensus 2 ilYlHGFnSSP~shk------a~l~~q----~~~~~~~~i~y~~p~l~-------------h~p~~a~~ele~~i~~~~~ 58 (191)
T COG3150 2 ILYLHGFNSSPGSHK------AVLLLQ----FIDEDVRDIEYSTPHLP-------------HDPQQALKELEKAVQELGD 58 (191)
T ss_pred eEEEecCCCCcccHH------HHHHHH----HHhccccceeeecCCCC-------------CCHHHHHHHHHHHHHHcCC
Confidence 678889887554432 111222 35567788888887332 1345778877766665442
Q ss_pred HcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 180 KYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 180 ~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
....++|-|.||..|.|+..++- +.+++ ..+.+...
T Consensus 59 ------~~p~ivGssLGGY~At~l~~~~G--irav~-~NPav~P~ 94 (191)
T COG3150 59 ------ESPLIVGSSLGGYYATWLGFLCG--IRAVV-FNPAVRPY 94 (191)
T ss_pred ------CCceEEeecchHHHHHHHHHHhC--Chhhh-cCCCcCch
Confidence 23789999999999999998874 33333 34444433
No 179
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.56 E-value=0.025 Score=48.28 Aligned_cols=108 Identities=18% Similarity=0.057 Sum_probs=69.3
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIK 178 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~ 178 (246)
-.+++.||-++.-.-......+.....+.++.++.+-.|- ++. .++-.+..+..+|+..+++++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S----sy~-----------G~Gt~slk~D~edl~~l~~Hi~ 101 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS----SYN-----------GYGTFSLKDDVEDLKCLLEHIQ 101 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc----ccc-----------ccccccccccHHHHHHHHHHhh
Confidence 4577788887754332223344455667789999887772 221 1222234477899999999876
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHH--HCCCceeEEEEecCccccc
Q 025920 179 EKYNARHSPVIVVGGSYGGMLATWFRL--KYPHVALGALASSAPILYF 224 (246)
Q Consensus 179 ~~~~~~~~p~ilvG~S~GG~la~~~~~--~yP~~v~g~i~sSap~~~~ 224 (246)
..-. ...++|+|||-|..=.++|.. .-|..+.++|+ -||+-..
T Consensus 102 ~~~f--St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIl-qApVSDr 146 (299)
T KOG4840|consen 102 LCGF--STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAIL-QAPVSDR 146 (299)
T ss_pred ccCc--ccceEEEecCccchHHHHHHHhccchHHHHHHHH-hCccchh
Confidence 4321 237999999999998888873 24566667775 4666433
No 180
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.54 E-value=0.051 Score=48.86 Aligned_cols=83 Identities=17% Similarity=0.196 Sum_probs=53.0
Q ss_pred CeEEEEccc-cccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHH-
Q 025920 129 ALLVYIEHR-YYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYN-ARHSPVIVVGGSYGGMLATWFRL- 205 (246)
Q Consensus 129 ~~Vi~~D~R-g~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~-~~~~p~ilvG~S~GG~la~~~~~- 205 (246)
++|+.+|+| |.|-|.... ...+-+.++.++|+..+++.+-+++. ..+.|+++.|-||||..+-.++.
T Consensus 2 aNvLfiDqPvGvGfSy~~~----------~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKT----------PIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred ccEEEecCCCCCCCCCCCC----------CCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 479999999 999985321 11222333444898888887665553 25679999999999975544433
Q ss_pred ---HC-----CC-ceeEEEEecCcc
Q 025920 206 ---KY-----PH-VALGALASSAPI 221 (246)
Q Consensus 206 ---~y-----P~-~v~g~i~sSap~ 221 (246)
.. |. .++|+++..+-+
T Consensus 72 I~~~n~~~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 72 ISQGNYICCEPPINLQGYMLGNPVT 96 (319)
T ss_pred HHhhcccccCCceeeeEEEeCCCCC
Confidence 22 11 356777766543
No 181
>PLN02162 triacylglycerol lipase
Probab=95.46 E-value=0.046 Score=51.39 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=27.5
Q ss_pred CCCCEEEEecChHHHHHHHHHH---HC-----CCceeEEEEecCccc
Q 025920 184 RHSPVIVVGGSYGGMLATWFRL---KY-----PHVALGALASSAPIL 222 (246)
Q Consensus 184 ~~~p~ilvG~S~GG~la~~~~~---~y-----P~~v~g~i~sSap~~ 222 (246)
++.++++.|||+||++|+.++. .. .+.+.+++..++|-.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 4568999999999999998743 11 123456777777754
No 182
>PLN02571 triacylglycerol lipase
Probab=95.42 E-value=0.069 Score=49.64 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025920 164 AQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 164 ~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
+|.++++..++ +++..++.++++.|||+||+||+..+..
T Consensus 208 ~qvl~eV~~L~----~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLV----EKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHH----HhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45555554444 3343234479999999999999997754
No 183
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.29 E-value=0.025 Score=54.62 Aligned_cols=58 Identities=16% Similarity=0.118 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC---------------CceeEEEEecCcccc
Q 025920 164 AQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYP---------------HVALGALASSAPILY 223 (246)
Q Consensus 164 ~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP---------------~~v~g~i~sSap~~~ 223 (246)
++....+..+|+.+.+.. .+.|++|+||||||.++..|...-. ..|+..|..++|+.-
T Consensus 193 d~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 456677778888776543 2468999999999999999876432 135677777877643
No 184
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.23 E-value=0.084 Score=48.04 Aligned_cols=93 Identities=9% Similarity=0.043 Sum_probs=55.7
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCC--eEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNA--LLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAIL 174 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~--~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i 174 (246)
+.-++|+||..-.-+.-. --..++....|. ..+.+-.+--|+-.-+ +..--++++...+++.+|
T Consensus 116 k~vlvFvHGfNntf~dav---~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Y-----------n~DreS~~~Sr~aLe~~l 181 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAV---YRTAQIVHDSGNDGVPVVFSWPSRGSLLGY-----------NYDRESTNYSRPALERLL 181 (377)
T ss_pred CeEEEEEcccCCchhHHH---HHHHHHHhhcCCCcceEEEEcCCCCeeeec-----------ccchhhhhhhHHHHHHHH
Confidence 456778888544322211 123344444443 3455555544432111 111125667888999999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~ 205 (246)
+.|.++.. ...+.|++||||..++.....
T Consensus 182 r~La~~~~--~~~I~ilAHSMGtwl~~e~Lr 210 (377)
T COG4782 182 RYLATDKP--VKRIYLLAHSMGTWLLMEALR 210 (377)
T ss_pred HHHHhCCC--CceEEEEEecchHHHHHHHHH
Confidence 99987764 346999999999999988653
No 185
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.16 E-value=0.052 Score=51.67 Aligned_cols=56 Identities=20% Similarity=0.402 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH----HCCCc-eeEEEEecCcc
Q 025920 164 AQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRL----KYPHV-ALGALASSAPI 221 (246)
Q Consensus 164 ~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~----~yP~~-v~g~i~sSap~ 221 (246)
+|.++++..+++..+.. .++.++++.|||+||+||+..+. ..|+. -..++..++|-
T Consensus 298 eQVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPR 358 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPR 358 (525)
T ss_pred HHHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCC
Confidence 56667766666554421 13457999999999999998764 24543 23455556663
No 186
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.11 E-value=0.88 Score=40.79 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=71.0
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHc-CCeEEEEccccccCCCCCCChhhhhcccccCCCC-CHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARF-NALLVYIEHRYYGKSIPFGSREEALKNASTLGYF-NSAQAITDYAAIL 174 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~-g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~yl-t~~q~l~D~~~~i 174 (246)
.-|+++.||-+.++... ..+-+.+++... |.-+.+++. |.+.. -+++ +..+.++.+.+-+
T Consensus 25 ~~P~ViwHG~GD~c~~~--g~~~~~~l~~~~~g~~~~~i~i---g~~~~-------------~s~~~~~~~Qve~vce~l 86 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDA--TNANFTQLLTNLSGSPGFCLEI---GNGVG-------------DSWLMPLTQQAEIACEKV 86 (314)
T ss_pred CCCeEEecCCCcccCCc--hHHHHHHHHHhCCCCceEEEEE---CCCcc-------------ccceeCHHHHHHHHHHHH
Confidence 47999999988777653 224555666443 455555543 44411 1122 3344555555555
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecCcccccCCC
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH--VALGALASSAPILYFDDI 227 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~--~v~g~i~sSap~~~~~~~ 227 (246)
....+ +. .-+.++|+|=||.++-.+..+.|+ .|+-.|..++|..-..++
T Consensus 87 ~~~~~-l~---~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~ 137 (314)
T PLN02633 87 KQMKE-LS---QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSL 137 (314)
T ss_pred hhchh-hh---CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCC
Confidence 54332 21 249999999999999999999997 599999999887666554
No 187
>PLN00413 triacylglycerol lipase
Probab=95.11 E-value=0.074 Score=50.14 Aligned_cols=39 Identities=28% Similarity=0.302 Sum_probs=27.9
Q ss_pred CCCCEEEEecChHHHHHHHHHHH----C----CCceeEEEEecCccc
Q 025920 184 RHSPVIVVGGSYGGMLATWFRLK----Y----PHVALGALASSAPIL 222 (246)
Q Consensus 184 ~~~p~ilvG~S~GG~la~~~~~~----y----P~~v~g~i~sSap~~ 222 (246)
++.++++.|||+||++|..++.. . ...+.+++..++|-.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 45689999999999999998742 1 223446777777754
No 188
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.01 E-value=0.58 Score=44.71 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=72.4
Q ss_pred CCCcEEEEeCCCC---CCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEE---ALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAA 172 (246)
Q Consensus 96 ~~~PI~l~hGg~g---~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~ 172 (246)
.+.|++++-.-.| .+..|..... .-.|.+.|.-|+++-.. ..|.+ ..|.++.+.-.+.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~dSe--vG~AL~~GHPvYFV~F~----p~P~p-------------gQTl~DV~~ae~~ 127 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPDSE--VGVALRAGHPVYFVGFF----PEPEP-------------GQTLEDVMRAEAA 127 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcccH--HHHHHHcCCCeEEEEec----CCCCC-------------CCcHHHHHHHHHH
Confidence 3688888863222 2333332111 12345567777776543 23321 1244555555667
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccC
Q 025920 173 ILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 225 (246)
Q Consensus 173 ~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~ 225 (246)
|++.+.+... +..|.+|+|..=||-.++.+++.+|+.+.-+|+.+||+-+..
T Consensus 128 Fv~~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 128 FVEEVAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred HHHHHHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 8888876653 222889999999999999999999999988888899997776
No 189
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.97 E-value=0.3 Score=42.39 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=56.7
Q ss_pred EEEEeCCCCCCC-ccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCC-HHHHHHHHHHHHHHH
Q 025920 100 IFVYLGAEEALD-GDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFN-SAQAITDYAAILLYI 177 (246)
Q Consensus 100 I~l~hGg~g~~~-~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt-~~q~l~D~~~~i~~l 177 (246)
|+-+.||.--.. .-.....++..++ +.|+.|++.=..- ...+.. ..++...+...++.+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La-~~Gy~ViAtPy~~------------------tfDH~~~A~~~~~~f~~~~~~L 79 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLA-DRGYAVIATPYVV------------------TFDHQAIAREVWERFERCLRAL 79 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHH-hCCcEEEEEecCC------------------CCcHHHHHHHHHHHHHHHHHHH
Confidence 344447653322 1112233555566 5699999854321 111211 123444455555555
Q ss_pred HHHcCC--CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025920 178 KEKYNA--RHSPVIVVGGSYGGMLATWFRLKYPHVALGALASS 218 (246)
Q Consensus 178 ~~~~~~--~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sS 218 (246)
....+. ...|++-+|||+|.-+-+.+...++..-.|-++.|
T Consensus 80 ~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 80 QKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred HHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 544322 23589999999999999998888876556666655
No 190
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=94.81 E-value=0.11 Score=48.18 Aligned_cols=110 Identities=12% Similarity=-0.005 Sum_probs=76.7
Q ss_pred CCcEEEEeCCCCCCCcc--ccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHH-HHHHHH
Q 025920 97 IAPIFVYLGAEEALDGD--ISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAI-TDYAAI 173 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~--~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l-~D~~~~ 173 (246)
+.|+++++..--.-..+ .... -+..++.+.|..|+.++.|+=.++.. -.+.++.+ +++.+-
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~-s~V~~l~~~g~~vfvIsw~nPd~~~~---------------~~~~edYi~e~l~~a 170 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEK-SLVRWLLEQGLDVFVISWRNPDASLA---------------AKNLEDYILEGLSEA 170 (445)
T ss_pred CCceEeeccccCceeEEeCCCCc-cHHHHHHHcCCceEEEeccCchHhhh---------------hccHHHHHHHHHHHH
Confidence 57888888643221111 1112 23455667899999999997665542 23455665 777777
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc-eeEEEEecCccccc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHV-ALGALASSAPILYF 224 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~-v~g~i~sSap~~~~ 224 (246)
++.+++..+. ..+.++|++.||++++.+.+.+|.. ++.+.+..+|+...
T Consensus 171 id~v~~itg~--~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 171 IDTVKDITGQ--KDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred HHHHHHHhCc--cccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 8888776643 3699999999999999999999988 88888777776433
No 191
>PLN02324 triacylglycerol lipase
Probab=94.75 E-value=0.12 Score=48.09 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=23.2
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~ 205 (246)
++.+.+++..++..+++.|||+||+||+..+.
T Consensus 203 V~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 203 LKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 34444455433457999999999999998774
No 192
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=94.74 E-value=0.16 Score=42.80 Aligned_cols=117 Identities=15% Similarity=0.014 Sum_probs=51.8
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCC-CCCh---hh--hhcccccCC----------C
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIP-FGSR---EE--ALKNASTLG----------Y 160 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p-~~~~---~~--~~~~~~~~~----------y 160 (246)
+.-|+.+||...+.+.+...++-+.....+.++..+++|-+.-=...+ .... .. ...+..... +
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 356899999999988876655555555444467888888765431110 0000 00 000111112 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEecChHHHHHHHHHHHC--------CCceeEEEEecCcc
Q 025920 161 FNSAQAITDYAAILLYIKEKYNARHSP-VIVVGGSYGGMLATWFRLKY--------PHVALGALASSAPI 221 (246)
Q Consensus 161 lt~~q~l~D~~~~i~~l~~~~~~~~~p-~ilvG~S~GG~la~~~~~~y--------P~~v~g~i~sSap~ 221 (246)
...+++++.+.+.++ ++ .| .-|+|.|-||++|+.++... ...++-+|+.|+..
T Consensus 84 ~~~~~sl~~l~~~i~---~~-----GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 84 EGLDESLDYLRDYIE---EN-----GPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp ---HHHHHHHHHHHH---HH--------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred cCHHHHHHHHHHHHH---hc-----CCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 223444444433333 32 14 36999999999999987532 12346667666544
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.57 E-value=0.29 Score=41.68 Aligned_cols=84 Identities=15% Similarity=0.234 Sum_probs=49.0
Q ss_pred HHHHHcCCeEEEEccc----cccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025920 122 DNAARFNALLVYIEHR----YYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGG 197 (246)
Q Consensus 122 ~~a~~~g~~Vi~~D~R----g~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG 197 (246)
+.|.+.|+.|+.+..- +|- +.. ....|.+ .-++....+...+.... ....+.++.|||||
T Consensus 138 ~rAv~~Gygviv~N~N~~~kfye-~k~-----------np~kyir--t~veh~~yvw~~~v~pa--~~~sv~vvahsyGG 201 (297)
T KOG3967|consen 138 KRAVAEGYGVIVLNPNRERKFYE-KKR-----------NPQKYIR--TPVEHAKYVWKNIVLPA--KAESVFVVAHSYGG 201 (297)
T ss_pred HHHHHcCCcEEEeCCchhhhhhh-ccc-----------Ccchhcc--chHHHHHHHHHHHhccc--CcceEEEEEeccCC
Confidence 4467788988887543 222 211 1233333 23344444444443322 22369999999999
Q ss_pred HHHHHHHHHCCCc--eeEEEEecCcc
Q 025920 198 MLATWFRLKYPHV--ALGALASSAPI 221 (246)
Q Consensus 198 ~la~~~~~~yP~~--v~g~i~sSap~ 221 (246)
.+.+.+..++|+. |.++-+.-+++
T Consensus 202 ~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 202 SLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred hhHHHHHHhcCCccceEEEEeecccc
Confidence 9999999999973 44444444443
No 194
>PLN02408 phospholipase A1
Probab=94.37 E-value=0.093 Score=48.07 Aligned_cols=48 Identities=17% Similarity=0.309 Sum_probs=29.5
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH----CCCc-eeEEEEecCcc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK----YPHV-ALGALASSAPI 221 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~----yP~~-v~g~i~sSap~ 221 (246)
++.+.+++..+..++++.|||+||+||...+.. .++. ...++..++|-
T Consensus 188 I~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPR 240 (365)
T PLN02408 188 IARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPR 240 (365)
T ss_pred HHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCC
Confidence 334444443333469999999999999887643 3321 23456666664
No 195
>PLN02934 triacylglycerol lipase
Probab=94.28 E-value=0.16 Score=48.36 Aligned_cols=47 Identities=26% Similarity=0.349 Sum_probs=31.6
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH----C----CCceeEEEEecCccc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK----Y----PHVALGALASSAPIL 222 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~----y----P~~v~g~i~sSap~~ 222 (246)
++.+.+++ ++.++++.|||+||++|..++.. . ......++..++|-.
T Consensus 311 lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRV 365 (515)
T PLN02934 311 LKSLLKEH--KNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRI 365 (515)
T ss_pred HHHHHHHC--CCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCc
Confidence 44444444 45689999999999999998632 1 122346677777754
No 196
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=94.22 E-value=1.5 Score=38.30 Aligned_cols=105 Identities=6% Similarity=-0.041 Sum_probs=55.2
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccc-cCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYY-GKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~-G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
+.|.+++..|.+... .... -+++.....|++|+-+|+-.| |.|+. +..-++.+...+|+..+++
T Consensus 29 ~~~tiliA~Gf~rrm--dh~a-gLA~YL~~NGFhViRyDsl~HvGlSsG------------~I~eftms~g~~sL~~V~d 93 (294)
T PF02273_consen 29 RNNTILIAPGFARRM--DHFA-GLAEYLSANGFHVIRYDSLNHVGLSSG------------DINEFTMSIGKASLLTVID 93 (294)
T ss_dssp -S-EEEEE-TT-GGG--GGGH-HHHHHHHTTT--EEEE---B-------------------------HHHHHHHHHHHHH
T ss_pred cCCeEEEecchhHHH--HHHH-HHHHHHhhCCeEEEeccccccccCCCC------------ChhhcchHHhHHHHHHHHH
Confidence 346666664443322 2222 355666678999999999988 88874 3445677888999999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~ 221 (246)
+++. .+. ..+-|+..|..|.+|...+.+- + +.-+|..-+.+
T Consensus 94 wl~~-~g~--~~~GLIAaSLSaRIAy~Va~~i-~-lsfLitaVGVV 134 (294)
T PF02273_consen 94 WLAT-RGI--RRIGLIAASLSARIAYEVAADI-N-LSFLITAVGVV 134 (294)
T ss_dssp HHHH-TT-----EEEEEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred HHHh-cCC--CcchhhhhhhhHHHHHHHhhcc-C-cceEEEEeeee
Confidence 9984 333 3599999999999999998743 4 34445444444
No 197
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.16 E-value=0.63 Score=38.29 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH------CCCceeEEEEecCcccc
Q 025920 163 SAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK------YPHVALGALASSAPILY 223 (246)
Q Consensus 163 ~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~------yP~~v~g~i~sSap~~~ 223 (246)
..+..+++...++....+- ++.+++|+|.|-|++++...+.. ..+.|.++++.+-|...
T Consensus 60 ~~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 60 VAAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 4566788888888776664 56799999999999999999876 34578888888877664
No 198
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.08 E-value=0.54 Score=40.99 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=59.7
Q ss_pred CCcEEEEe-CCCCCCCccccchhHHHHHHHHcC--CeEEEEccccccCCCCCCChhhhhcccc---cCCCCCHHHHHHHH
Q 025920 97 IAPIFVYL-GAEEALDGDISVIGFLTDNAARFN--ALLVYIEHRYYGKSIPFGSREEALKNAS---TLGYFNSAQAITDY 170 (246)
Q Consensus 97 ~~PI~l~h-Gg~g~~~~~~~~~~~~~~~a~~~g--~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~---~~~ylt~~q~l~D~ 170 (246)
.+++++.. |++|...-+.. |..++-...+ ..+..+-|-||-.- |. ++++.. +-.-++.++.++--
T Consensus 28 ~~~li~~IpGNPG~~gFY~~---F~~~L~~~l~~r~~~wtIsh~~H~~~-P~-----sl~~~~s~~~~eifsL~~QV~HK 98 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTE---FARHLHLNLIDRLPVWTISHAGHALM-PA-----SLREDHSHTNEEIFSLQDQVDHK 98 (301)
T ss_pred CceEEEEecCCCCchhHHHH---HHHHHHHhcccccceeEEeccccccC-Cc-----ccccccccccccccchhhHHHHH
Confidence 45665554 88887754433 3333333333 34888888888643 21 111222 22333444444443
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-CCC-ceeEEEEe
Q 025920 171 AAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK-YPH-VALGALAS 217 (246)
Q Consensus 171 ~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~-yP~-~v~g~i~s 217 (246)
.+|++ ++-..+.+++++|||-|+.+.+.+... -++ .|..++..
T Consensus 99 laFik----~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 99 LAFIK----EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL 143 (301)
T ss_pred HHHHH----HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEe
Confidence 33333 333456799999999999999988752 222 34555543
No 199
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=93.86 E-value=0.33 Score=40.91 Aligned_cols=38 Identities=32% Similarity=0.374 Sum_probs=32.4
Q ss_pred CCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025920 182 NARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSA 219 (246)
Q Consensus 182 ~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSa 219 (246)
+.+..++++-|-|+||++|+..+..||..+.|.+..|+
T Consensus 89 Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 89 GIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred CCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 44556899999999999999999999988888877664
No 200
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.84 E-value=0.13 Score=45.70 Aligned_cols=60 Identities=22% Similarity=0.363 Sum_probs=42.2
Q ss_pred HHHHHHH-HHHHHHHHHcCC--CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025920 165 QAITDYA-AILLYIKEKYNA--RHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYF 224 (246)
Q Consensus 165 q~l~D~~-~~i~~l~~~~~~--~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~ 224 (246)
.....++ +++-.+++.+.. ....-+|.|.|+||.++++.++.||+.+--++..|+-+...
T Consensus 153 ~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 153 AYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred HHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 3444444 566667766642 22246899999999999999999999986666666554444
No 201
>PLN02761 lipase class 3 family protein
Probab=93.34 E-value=0.18 Score=48.14 Aligned_cols=22 Identities=27% Similarity=0.270 Sum_probs=18.6
Q ss_pred CCCCEEEEecChHHHHHHHHHH
Q 025920 184 RHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 184 ~~~p~ilvG~S~GG~la~~~~~ 205 (246)
++.++++.|||+||+||...+.
T Consensus 292 e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 292 HEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred CCceEEEeccchHHHHHHHHHH
Confidence 3457999999999999998763
No 202
>PLN02802 triacylglycerol lipase
Probab=93.32 E-value=0.17 Score=48.15 Aligned_cols=48 Identities=23% Similarity=0.320 Sum_probs=29.5
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHH----HCCCc-eeEEEEecCccc
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRL----KYPHV-ALGALASSAPIL 222 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~----~yP~~-v~g~i~sSap~~ 222 (246)
+.+.+++..++..+++.|||+||+||...+. ..++. -..++..++|-.
T Consensus 319 ~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRV 371 (509)
T PLN02802 319 RRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRV 371 (509)
T ss_pred HHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCc
Confidence 3344444333457999999999999997654 23432 124566666643
No 203
>PLN02753 triacylglycerol lipase
Probab=92.43 E-value=0.31 Score=46.62 Aligned_cols=21 Identities=33% Similarity=0.417 Sum_probs=18.5
Q ss_pred CCCEEEEecChHHHHHHHHHH
Q 025920 185 HSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 185 ~~p~ilvG~S~GG~la~~~~~ 205 (246)
+.++++.|||+||+||+..+.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred CceEEEEccCHHHHHHHHHHH
Confidence 458999999999999999864
No 204
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.37 E-value=1.5 Score=38.72 Aligned_cols=116 Identities=13% Similarity=0.151 Sum_probs=54.4
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHc--CCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARF--NALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAI 173 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~--g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~ 173 (246)
+..||++.||-..++..-.. .+.+.++.++. |.-|..++. |.+.. . +.++-=+.+..+.++.+.+.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~-m~~i~~~i~~~~PG~yV~si~i---g~~~~-~-------D~~~s~f~~v~~Qv~~vc~~ 71 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSS-MGSIKELIEEQHPGTYVHSIEI---GNDPS-E-------DVENSFFGNVNDQVEQVCEQ 71 (279)
T ss_dssp SS--EEEE--TT--S--TTT-HHHHHHHHHHHSTT--EEE--S---SSSHH-H-------HHHHHHHSHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCccccCChhH-HHHHHHHHHHhCCCceEEEEEE---CCCcc-h-------hhhhhHHHHHHHHHHHHHHH
Confidence 35899999998766532111 23455555443 344555443 21100 0 00010012233444444444
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-ceeEEEEecCcccccCCC
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPH-VALGALASSAPILYFDDI 227 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~-~v~g~i~sSap~~~~~~~ 227 (246)
+....+ + . .-+.++|.|=||.+.-.+..++|+ .|+-.|..++|..-.-++
T Consensus 72 l~~~p~-L--~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~ 122 (279)
T PF02089_consen 72 LANDPE-L--A-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGL 122 (279)
T ss_dssp HHH-GG-G--T-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-
T ss_pred HhhChh-h--h-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccC
Confidence 443221 1 1 259999999999999999999986 589999999998666554
No 205
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.34 E-value=0.59 Score=43.30 Aligned_cols=62 Identities=16% Similarity=0.375 Sum_probs=45.6
Q ss_pred HHHHHHcCCeEEEEcc-ccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHH
Q 025920 121 TDNAARFNALLVYIEH-RYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGML 199 (246)
Q Consensus 121 ~~~a~~~g~~Vi~~D~-Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~l 199 (246)
.+..++.|.-|+.+|- |||- |.+ |.++..+|+.++++....+.+ ..+++|+|.|+|.=+
T Consensus 280 ~~~l~~~gvpVvGvdsLRYfW-~~r-----------------tPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADv 339 (456)
T COG3946 280 AEALQKQGVPVVGVDSLRYFW-SER-----------------TPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADV 339 (456)
T ss_pred HHHHHHCCCceeeeehhhhhh-ccC-----------------CHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchh
Confidence 3445677999999884 5544 322 456899999999998887764 558999999999855
Q ss_pred HHH
Q 025920 200 ATW 202 (246)
Q Consensus 200 a~~ 202 (246)
--.
T Consensus 340 lP~ 342 (456)
T COG3946 340 LPF 342 (456)
T ss_pred hHH
Confidence 433
No 206
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=92.26 E-value=3.7 Score=36.19 Aligned_cols=111 Identities=14% Similarity=0.077 Sum_probs=66.4
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYI 177 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l 177 (246)
.|+++.||-...+.... +..+...+-+.-|..|+++|. |=| .. +--+....+.+.-+.+.+...
T Consensus 24 ~P~ii~HGigd~c~~~~-~~~~~q~l~~~~g~~v~~lei-g~g--~~------------~s~l~pl~~Qv~~~ce~v~~m 87 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLS-MANLTQLLEELPGSPVYCLEI-GDG--IK------------DSSLMPLWEQVDVACEKVKQM 87 (296)
T ss_pred CCEEEEeccCcccccch-HHHHHHHHHhCCCCeeEEEEe-cCC--cc------------hhhhccHHHHHHHHHHHHhcc
Confidence 79999999888877622 222322233334677888874 223 11 000112223333333333322
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-ceeEEEEecCcccccCCCC
Q 025920 178 KEKYNARHSPVIVVGGSYGGMLATWFRLKYPH-VALGALASSAPILYFDDIT 228 (246)
Q Consensus 178 ~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~-~v~g~i~sSap~~~~~~~~ 228 (246)
++ + ..-..++|.|=||.++-.++..-|+ .|+..|..++|.--..++.
T Consensus 88 ~~-l---sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p 135 (296)
T KOG2541|consen 88 PE-L---SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIP 135 (296)
T ss_pred hh-c---cCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCC
Confidence 22 2 1248999999999999999888665 4788898888987666654
No 207
>PLN02719 triacylglycerol lipase
Probab=92.10 E-value=0.33 Score=46.26 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=22.7
Q ss_pred HHHHHHHcCC---CCCCEEEEecChHHHHHHHHHH
Q 025920 174 LLYIKEKYNA---RHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 174 i~~l~~~~~~---~~~p~ilvG~S~GG~la~~~~~ 205 (246)
++.+.+++.. +..++++.|||+||+||...+.
T Consensus 283 V~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 283 VKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 4445444431 2347999999999999998764
No 208
>PLN02847 triacylglycerol lipase
Probab=91.95 E-value=0.37 Score=46.76 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=22.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025920 172 AILLYIKEKYNARHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~ 205 (246)
..+..+..++ ++-+++++|||+||.+|+.+..
T Consensus 239 ~~L~kal~~~--PdYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 239 PCLLKALDEY--PDFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred HHHHHHHHHC--CCCeEEEeccChHHHHHHHHHH
Confidence 3344444443 4568999999999999998654
No 209
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.95 E-value=0.31 Score=46.37 Aligned_cols=49 Identities=20% Similarity=0.216 Sum_probs=36.6
Q ss_pred HHHHHHHHHc-CCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 172 AILLYIKEKY-NARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 172 ~~i~~l~~~~-~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
.+-+.+.+.+ +.+...-+..|+|-||.-++..+++||+.++|+|+.++.
T Consensus 100 ~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 100 VVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred HHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCch
Confidence 3334444433 333346799999999999999999999999999986543
No 210
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=91.84 E-value=0.14 Score=49.77 Aligned_cols=84 Identities=20% Similarity=0.194 Sum_probs=59.3
Q ss_pred cCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025920 127 FNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 127 ~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
.|+.+...+-||=|+=.. .+.. +-+...-.+.++|+.+-+++|.++.-....+.-+.|+|-||.|++...-.
T Consensus 498 ~G~Vla~a~VRGGGe~G~------~WHk--~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~ 569 (712)
T KOG2237|consen 498 RGWVLAYANVRGGGEYGE------QWHK--DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQ 569 (712)
T ss_pred cceEEEEEeeccCccccc------chhh--ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhcc
Confidence 678888889998764321 0000 00111122467888888888877654456689999999999999999999
Q ss_pred CCCceeEEEEec
Q 025920 207 YPHVALGALASS 218 (246)
Q Consensus 207 yP~~v~g~i~sS 218 (246)
.|+.+.++|+--
T Consensus 570 rPdLF~avia~V 581 (712)
T KOG2237|consen 570 RPDLFGAVIAKV 581 (712)
T ss_pred CchHhhhhhhcC
Confidence 999998877644
No 211
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.78 E-value=0.48 Score=40.10 Aligned_cols=71 Identities=18% Similarity=0.107 Sum_probs=43.0
Q ss_pred CeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC
Q 025920 129 ALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKY 207 (246)
Q Consensus 129 ~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~y 207 (246)
++|+++=.|--....-.... ..+... -.+-+-.|+.+-.++..++.+ ++.|+||.|||=|+++...+..++
T Consensus 46 ~~vfAP~YRQatl~~~~~~~-----~~~~~~--a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTD-----REDAEK--AFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccC-----cchhHH--HHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 67888888855433211000 001111 123456677755555555543 457999999999999999998775
No 212
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=91.51 E-value=0.34 Score=43.99 Aligned_cols=46 Identities=26% Similarity=0.286 Sum_probs=30.1
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHH----HCC--CceeEEEEecCcc
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGMLATWFRL----KYP--HVALGALASSAPI 221 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~----~yP--~~v~g~i~sSap~ 221 (246)
++.++..+ ++-.+.+.|||+||++|...+. ..+ ..-.+++..+.|-
T Consensus 161 ~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 161 LRRLIELY--PNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred HHHHHHhc--CCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 44455544 3568999999999999988653 222 1234666666663
No 213
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.50 E-value=0.36 Score=42.82 Aligned_cols=43 Identities=23% Similarity=0.456 Sum_probs=31.1
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 173 ILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 173 ~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
++..+++.+ ++.++.|.|||.||++|+.+-.+|.-. +|+.++|
T Consensus 265 I~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fglP---~VaFesP 307 (425)
T KOG4540|consen 265 ILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFGLP---VVAFESP 307 (425)
T ss_pred HHHHHHHhC--CCceEEEeccccchHHHHHhccccCCc---eEEecCc
Confidence 344555555 567899999999999999998888532 3444444
No 214
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.50 E-value=0.36 Score=42.82 Aligned_cols=43 Identities=23% Similarity=0.456 Sum_probs=31.1
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025920 173 ILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAP 220 (246)
Q Consensus 173 ~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap 220 (246)
++..+++.+ ++.++.|.|||.||++|+.+-.+|.-. +|+.++|
T Consensus 265 I~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fglP---~VaFesP 307 (425)
T COG5153 265 ILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFGLP---VVAFESP 307 (425)
T ss_pred HHHHHHHhC--CCceEEEeccccchHHHHHhccccCCc---eEEecCc
Confidence 344555555 567899999999999999998888532 3444444
No 215
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.63 E-value=1.1 Score=40.47 Aligned_cols=97 Identities=24% Similarity=0.319 Sum_probs=62.0
Q ss_pred CCcEEEEe-CCCCCCCccccchhHHHHHHH------------HcCCeEEEEccc-cccCCCCCCChhhhhcccccCCCC-
Q 025920 97 IAPIFVYL-GAEEALDGDISVIGFLTDNAA------------RFNALLVYIEHR-YYGKSIPFGSREEALKNASTLGYF- 161 (246)
Q Consensus 97 ~~PI~l~h-Gg~g~~~~~~~~~~~~~~~a~------------~~g~~Vi~~D~R-g~G~S~p~~~~~~~~~~~~~~~yl- 161 (246)
..|.++-. ||+|.+..-. |-+.++.+ -..+.++++|.+ |-|-|.--+. .++
T Consensus 30 ~~pl~lwlqGgpGaSstG~---GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~-----------~~Y~ 95 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGF---GNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGS-----------SAYT 95 (414)
T ss_pred CCCeeEEecCCCCCCCcCc---cchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCc-----------cccc
Confidence 35665544 8888765432 22222211 113678888877 7777754221 222
Q ss_pred -CHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHHHC
Q 025920 162 -NSAQAITDYAAILLYIKEKYN-ARHSPVIVVGGSYGGMLATWFRLKY 207 (246)
Q Consensus 162 -t~~q~l~D~~~~i~~l~~~~~-~~~~p~ilvG~S~GG~la~~~~~~y 207 (246)
+.+|+..|+.++++.+-.... ....|.+++--||||-+|+.++..-
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 357889999988887654322 2456999999999999999887653
No 216
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=90.58 E-value=0.7 Score=44.29 Aligned_cols=56 Identities=20% Similarity=0.258 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHH---cCCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCccc
Q 025920 167 ITDYAAILLYIKEK---YNARHSPVIVVGGSYGGMLATWFRLK--YPHVALGALASSAPIL 222 (246)
Q Consensus 167 l~D~~~~i~~l~~~---~~~~~~p~ilvG~S~GG~la~~~~~~--yP~~v~g~i~sSap~~ 222 (246)
+.|...-+++++++ ++-+..++.++|||.||+.+..+... ..+.+..+|..|+..+
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 44655555555543 34455689999999999998776531 2245666666555543
No 217
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.04 E-value=0.37 Score=39.69 Aligned_cols=37 Identities=30% Similarity=0.301 Sum_probs=33.1
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccc
Q 025920 187 PVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILY 223 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~ 223 (246)
..++-|+||||..|+.+-.++|+.+.++|+.|+...+
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 3689999999999999999999999999999877543
No 218
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=89.74 E-value=0.82 Score=41.69 Aligned_cols=40 Identities=23% Similarity=0.335 Sum_probs=30.9
Q ss_pred CCCCEEEEecChHHHHHHHHHHHCC-----CceeEEEEecCcccc
Q 025920 184 RHSPVIVVGGSYGGMLATWFRLKYP-----HVALGALASSAPILY 223 (246)
Q Consensus 184 ~~~p~ilvG~S~GG~la~~~~~~yP-----~~v~g~i~sSap~~~ 223 (246)
.+.|+.|+|||+|+.+.......-. ..|.-+++.++|+-.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 5679999999999998877554433 347888888998854
No 219
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=89.69 E-value=3.1 Score=35.33 Aligned_cols=103 Identities=18% Similarity=0.123 Sum_probs=58.6
Q ss_pred cEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHH
Q 025920 99 PIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIK 178 (246)
Q Consensus 99 PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~ 178 (246)
|++++.|.-+...... .-..++-.+.|+.++.+-.+.--...|.. ....+++. +++.+.
T Consensus 1 plvvl~gW~gA~~~hl---~KY~~~Y~~~g~~il~~~~~~~~~~~~~~---------------~~~~~~~~---l~~~l~ 59 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHL---AKYSDLYQDPGFDILLVTSPPADFFWPSK---------------RLAPAADK---LLELLS 59 (240)
T ss_pred CEEEEEeCCCCCHHHH---HHHHHHHHhcCCeEEEEeCCHHHHeeecc---------------chHHHHHH---HHHHhh
Confidence 7899999887665422 11233334478888887665443333211 11223333 333333
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHH---------CCC-ceeEEEEecCccc
Q 025920 179 EKYNARHSPVIVVGGSYGGMLATWFRLK---------YPH-VALGALASSAPIL 222 (246)
Q Consensus 179 ~~~~~~~~p~ilvG~S~GG~la~~~~~~---------yP~-~v~g~i~sSap~~ 222 (246)
+....+..++++-..|.||........+ .+- .+.|.|.-|+|-.
T Consensus 60 ~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 60 DSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred hhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 3222122389999999988777765441 111 2789999999854
No 220
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=87.43 E-value=4.5 Score=42.69 Aligned_cols=80 Identities=24% Similarity=0.264 Sum_probs=50.7
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHH-HHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYA-AIL 174 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~-~~i 174 (246)
.+.|+||+|.-||... .+..++.+ ++-+-||.-.. +... .+.+++++ .+|
T Consensus 2122 e~~~~Ffv~pIEG~tt-------~l~~la~r-------le~PaYglQ~T-----------~~vP----~dSies~A~~yi 2172 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTT-------ALESLASR-------LEIPAYGLQCT-----------EAVP----LDSIESLAAYYI 2172 (2376)
T ss_pred cCCceEEEeccccchH-------HHHHHHhh-------cCCcchhhhcc-----------ccCC----cchHHHHHHHHH
Confidence 4689999998777553 33445554 34566775321 1111 13455655 456
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025920 175 LYIKEKYNARHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 175 ~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
+.+++-- +..|.-++|.|||..++-.++..
T Consensus 2173 rqirkvQ--P~GPYrl~GYSyG~~l~f~ma~~ 2202 (2376)
T KOG1202|consen 2173 RQIRKVQ--PEGPYRLAGYSYGACLAFEMASQ 2202 (2376)
T ss_pred HHHHhcC--CCCCeeeeccchhHHHHHHHHHH
Confidence 6666432 45699999999999999988754
No 221
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=86.41 E-value=3.8 Score=39.91 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=57.0
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHH-
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIK- 178 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~- 178 (246)
|+-+|||+--...-.....++.++++..|+-|+.+|+-=--+ .|++ .+++.+--..-++.
T Consensus 399 i~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-aPFP------------------RaleEv~fAYcW~in 459 (880)
T KOG4388|consen 399 IVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-APFP------------------RALEEVFFAYCWAIN 459 (880)
T ss_pred EEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-CCCC------------------cHHHHHHHHHHHHhc
Confidence 334456554444333344688999999999999999632211 1332 12333221111221
Q ss_pred --HHcCCCCCCEEEEecChHHHHHHHHHHH---CCCc-eeEEEEecCcc
Q 025920 179 --EKYNARHSPVIVVGGSYGGMLATWFRLK---YPHV-ALGALASSAPI 221 (246)
Q Consensus 179 --~~~~~~~~p~ilvG~S~GG~la~~~~~~---yP~~-v~g~i~sSap~ 221 (246)
..++....++++.|-|-||.|..-.+++ |.-+ -+|+++.-.|.
T Consensus 460 n~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 460 NCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred CHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 2234456689999999999886655433 2211 24666544443
No 222
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.81 E-value=2.2 Score=37.67 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=55.7
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHH----HH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYA----AI 173 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~----~~ 173 (246)
+|+-+...+.|+...+.. -.+.+-..+.+..-+.+|-++||...|....- ..+.| +.|+- +.
T Consensus 113 ~~KOG~~a~tgdh~y~rr--~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~------~~Le~------vtDlf~mG~A~ 178 (371)
T KOG1551|consen 113 ADLCLSWALTGDHVYTRR--LVLSKPINKREIATMVLEKPFYGQRVPEEQII------HMLEY------VTDLFKMGRAT 178 (371)
T ss_pred CCeeEEEeecCCceeEee--eeecCchhhhcchheeeecccccccCCHHHHH------HHHHH------HHHHHHhhHHH
Confidence 566555555555432221 01122223345567889999999998843210 11111 22321 33
Q ss_pred HHHHHHHcCC----CCCCEEEEecChHHHHHHHHHHHCCCce
Q 025920 174 LLYIKEKYNA----RHSPVIVVGGSYGGMLATWFRLKYPHVA 211 (246)
Q Consensus 174 i~~l~~~~~~----~~~p~ilvG~S~GG~la~~~~~~yP~~v 211 (246)
|++....+.. .-.+..++|-||||.+|...-..++.-|
T Consensus 179 I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pv 220 (371)
T KOG1551|consen 179 IQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPV 220 (371)
T ss_pred HHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCc
Confidence 3333333321 1237999999999999999998777654
No 223
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=85.75 E-value=1 Score=43.67 Aligned_cols=115 Identities=19% Similarity=0.186 Sum_probs=72.6
Q ss_pred CCcEEEEe-CCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 97 IAPIFVYL-GAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 97 ~~PI~l~h-Gg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
..|-+++. ||..-+.. ....+.+ .+=.+.|..-+....||=|+=.|.=.. .+.+ + +-+...+|+.++.+
T Consensus 420 ~~pTll~aYGGF~vslt-P~fs~~~-~~WLerGg~~v~ANIRGGGEfGp~WH~-Aa~k--~-----nrq~vfdDf~AVae 489 (648)
T COG1505 420 ENPTLLYAYGGFNISLT-PRFSGSR-KLWLERGGVFVLANIRGGGEFGPEWHQ-AGMK--E-----NKQNVFDDFIAVAE 489 (648)
T ss_pred CCceEEEeccccccccC-Cccchhh-HHHHhcCCeEEEEecccCCccCHHHHH-HHhh--h-----cchhhhHHHHHHHH
Confidence 35666665 44433221 1122344 222356778888999998876651000 0011 1 22367899999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~ 222 (246)
.+.++.-....++-+.|+|=||.|......++|+.+.++|. .-|++
T Consensus 490 dLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~-evPll 535 (648)
T COG1505 490 DLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVC-EVPLL 535 (648)
T ss_pred HHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceee-ccchh
Confidence 99876432334789999999999999999999999766654 44543
No 224
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=84.19 E-value=6.5 Score=37.45 Aligned_cols=99 Identities=23% Similarity=0.350 Sum_probs=65.2
Q ss_pred ccCCCCCCCCCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCe-EEEEccccccCCCCCCChhhhhcccccCCCCCHHH
Q 025920 87 YWGGGAGADAIAPIFVYLGAEEALDGDISVIGFLTDNAARFNAL-LVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQ 165 (246)
Q Consensus 87 ~~~~g~~~~~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~-Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q 165 (246)
|..+| +-++|+.+|-.|--.++.|.. +.. .++.|+- ++.-|.|=-|.+--.+ +++
T Consensus 281 YFnPG---D~KPPL~VYFSGyR~aEGFEg---y~M--Mk~Lg~PfLL~~DpRleGGaFYlG----------------s~e 336 (511)
T TIGR03712 281 YFNPG---DFKPPLNVYFSGYRPAEGFEG---YFM--MKRLGAPFLLIGDPRLEGGAFYLG----------------SDE 336 (511)
T ss_pred ecCCc---CCCCCeEEeeccCcccCcchh---HHH--HHhcCCCeEEeeccccccceeeeC----------------cHH
Confidence 45664 357899998866555666542 221 3455554 6667888777664332 333
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-CCC
Q 025920 166 AITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK-YPH 209 (246)
Q Consensus 166 ~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~-yP~ 209 (246)
.-+-+.+.|++.-..++-+...+||-|-|||..=|+.+.++ .|+
T Consensus 337 yE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 337 YEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 44445555666555666666789999999999999999887 464
No 225
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.50 E-value=3.6 Score=40.06 Aligned_cols=52 Identities=27% Similarity=0.428 Sum_probs=34.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-C----CC------ceeEEEEecCccc
Q 025920 171 AAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK-Y----PH------VALGALASSAPIL 222 (246)
Q Consensus 171 ~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~-y----P~------~v~g~i~sSap~~ 222 (246)
.++++.+...--.++.|++.+||||||.++=.+... + |+ ...|+|..|.|+.
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 345555443322246799999999999998776654 3 33 2368888888863
No 226
>PF03283 PAE: Pectinacetylesterase
Probab=78.19 E-value=13 Score=34.06 Aligned_cols=58 Identities=24% Similarity=0.273 Sum_probs=37.1
Q ss_pred HHHHHHHHHHH-cCCCCCCEEEEecChHHHHHHH----HHHHCCCce-eEEEEecCcccccCCCC
Q 025920 170 YAAILLYIKEK-YNARHSPVIVVGGSYGGMLATW----FRLKYPHVA-LGALASSAPILYFDDIT 228 (246)
Q Consensus 170 ~~~~i~~l~~~-~~~~~~p~ilvG~S~GG~la~~----~~~~yP~~v-~g~i~sSap~~~~~~~~ 228 (246)
+.++++++..+ +. +...++|-|.|-||.=+.. ++..+|..+ ..++.-|+..+...++.
T Consensus 140 ~~avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~ 203 (361)
T PF03283_consen 140 LRAVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYS 203 (361)
T ss_pred HHHHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcc
Confidence 44556666665 32 2347999999999977665 567788533 34455666766665543
No 227
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=76.40 E-value=1.8 Score=37.07 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=59.3
Q ss_pred hHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025920 118 GFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGG 197 (246)
Q Consensus 118 ~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG 197 (246)
...++.....|+.|+.+|.-. | .|-.........++=++-.+.+-...|+..++++++.+. ...++-++|.-|||
T Consensus 57 r~~Adk~A~~Gy~v~vPD~~~-G--dp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGa 131 (242)
T KOG3043|consen 57 REGADKVALNGYTVLVPDFFR-G--DPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGA 131 (242)
T ss_pred HHHHHHHhcCCcEEEcchhhc-C--CCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecc
Confidence 344555555699999999742 3 221110000000011223355667889999999999554 34589999999999
Q ss_pred HHHHHHHHHCCCceeEEEE
Q 025920 198 MLATWFRLKYPHVALGALA 216 (246)
Q Consensus 198 ~la~~~~~~yP~~v~g~i~ 216 (246)
.++..+..++|+...++.+
T Consensus 132 k~vv~~~~~~~~f~a~v~~ 150 (242)
T KOG3043|consen 132 KVVVTLSAKDPEFDAGVSF 150 (242)
T ss_pred eEEEEeeccchhheeeeEe
Confidence 9999999999954333333
No 228
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=73.42 E-value=12 Score=31.89 Aligned_cols=23 Identities=30% Similarity=0.411 Sum_probs=19.0
Q ss_pred CCCCEEEEecChHHHHHHHHHHH
Q 025920 184 RHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 184 ~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
...+++++|.|.|+.++...+.+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHH
Confidence 45689999999999999886544
No 229
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=72.55 E-value=19 Score=32.36 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=53.0
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccc--cccCCCCCCChhh-hhcc--------cccCCCCCHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHR--YYGKSIPFGSREE-ALKN--------ASTLGYFNSAQA 166 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~R--g~G~S~p~~~~~~-~~~~--------~~~~~ylt~~q~ 166 (246)
.+++++.|-.++..+ ..-.++|+++|+-||..|-. |-|-...+...+. .... -+.-..+++.+.
T Consensus 3 ~~~i~I~GPTAsGKT-----~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f 77 (308)
T COG0324 3 PKLIVIAGPTASGKT-----ALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEF 77 (308)
T ss_pred ccEEEEECCCCcCHH-----HHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHH
Confidence 457777775555433 35578999999999999965 2232211110000 0101 012235677888
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecCh
Q 025920 167 ITDYAAILLYIKEKYNARHSPVIVVGGSY 195 (246)
Q Consensus 167 l~D~~~~i~~l~~~~~~~~~p~ilvG~S~ 195 (246)
..|+...++.+..+ +...+++|+|+
T Consensus 78 ~~~a~~~i~~i~~r----gk~pIlVGGTg 102 (308)
T COG0324 78 QRDALAAIDDILAR----GKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHHHHhC----CCCcEEEccHH
Confidence 88888888887764 23468898875
No 230
>PLN02840 tRNA dimethylallyltransferase
Probab=71.54 E-value=21 Score=33.56 Aligned_cols=89 Identities=18% Similarity=0.165 Sum_probs=51.8
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccc--c----CCCCCCChhhh----h-cccccCCCCCHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYY--G----KSIPFGSREEA----L-KNASTLGYFNSAQ 165 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~--G----~S~p~~~~~~~----~-~~~~~~~ylt~~q 165 (246)
..+++++.|..|+.-. .....++++++..++..|-... | ...|....... + ...+.-..++..+
T Consensus 20 ~~~vi~I~GptgsGKT-----tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~ 94 (421)
T PLN02840 20 KEKVIVISGPTGAGKS-----RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGA 94 (421)
T ss_pred CCeEEEEECCCCCCHH-----HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHH
Confidence 4567777787776643 3556788899989999986422 2 22221100000 0 0001123357778
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEecC
Q 025920 166 AITDYAAILLYIKEKYNARHSPVIVVGGS 194 (246)
Q Consensus 166 ~l~D~~~~i~~l~~~~~~~~~p~ilvG~S 194 (246)
...|....++.+..+ +...||+|++
T Consensus 95 F~~~A~~~I~~i~~r----gkiPIvVGGT 119 (421)
T PLN02840 95 FFDDARRATQDILNR----GRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHHhc----CCCEEEEcCc
Confidence 888888888887654 2345788876
No 231
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=68.94 E-value=26 Score=26.00 Aligned_cols=41 Identities=15% Similarity=0.185 Sum_probs=28.5
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHH--HHHHHHHHCCCceeEEEE
Q 025920 174 LLYIKEKYNARHSPVIVVGGSYGGM--LATWFRLKYPHVALGALA 216 (246)
Q Consensus 174 i~~l~~~~~~~~~p~ilvG~S~GG~--la~~~~~~yP~~v~g~i~ 216 (246)
++.+.+.+ ++.+++++|-|=-.= +-..++.+||+.|.++.+
T Consensus 55 i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 55 IERILRDF--PERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 44444555 567899999886554 334467899999887754
No 232
>PLN02748 tRNA dimethylallyltransferase
Probab=68.57 E-value=34 Score=32.62 Aligned_cols=89 Identities=18% Similarity=0.222 Sum_probs=55.1
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEc--cccccCCCCCCCh--hh-h------hcccccCCCCCHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIE--HRYYGKSIPFGSR--EE-A------LKNASTLGYFNSAQ 165 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D--~Rg~G~S~p~~~~--~~-~------~~~~~~~~ylt~~q 165 (246)
+++|+++.|-.|+.-+ .+..++|.++++.||..| |-|-|....+... ++ . +...+.-..+++.+
T Consensus 21 ~~~~i~i~GptgsGKs-----~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 21 KAKVVVVMGPTGSGKS-----KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCEEEEECCCCCCHH-----HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 4678888897776644 355688999999999999 4555543221100 00 0 00001113457788
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEecC
Q 025920 166 AITDYAAILLYIKEKYNARHSPVIVVGGS 194 (246)
Q Consensus 166 ~l~D~~~~i~~l~~~~~~~~~p~ilvG~S 194 (246)
...+....|+.+..+. ...||+|+|
T Consensus 96 F~~~A~~~I~~I~~rg----k~PIlVGGT 120 (468)
T PLN02748 96 FRDHAVPLIEEILSRN----GLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHhcC----CCeEEEcCh
Confidence 8888888888876542 346888877
No 233
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=65.01 E-value=33 Score=30.71 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=26.6
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccc
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHR 137 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~R 137 (246)
.+++++.|..++.-. ..-..+++++++.++..|-+
T Consensus 4 ~~~i~i~GptgsGKt-----~la~~la~~~~~~iis~Ds~ 38 (307)
T PRK00091 4 PKVIVIVGPTASGKT-----ALAIELAKRLNGEIISADSM 38 (307)
T ss_pred ceEEEEECCCCcCHH-----HHHHHHHHhCCCcEEecccc
Confidence 468888887776643 24467888889999999986
No 234
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=60.14 E-value=31 Score=33.99 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHc--CCCCCCEEEEecChHHHHHHHHHHH-CCCceeEEEEecCcccccCC
Q 025920 161 FNSAQAITDYAAILLYIKEKY--NARHSPVIVVGGSYGGMLATWFRLK-YPHVALGALASSAPILYFDD 226 (246)
Q Consensus 161 lt~~q~l~D~~~~i~~l~~~~--~~~~~p~ilvG~S~GG~la~~~~~~-yP~~v~g~i~sSap~~~~~~ 226 (246)
.++.+.++-+..|.+....+. ..+..++||+|.|||..++.....- +-..|+++|-.+=|+...++
T Consensus 223 ~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg 291 (784)
T KOG3253|consen 223 ANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG 291 (784)
T ss_pred cchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc
Confidence 345567777777766443322 2356699999999998887776644 33457888877766655443
No 235
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=58.80 E-value=14 Score=29.81 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=27.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHcCCC--CCCEEEEecChHHH
Q 025920 157 TLGYFNSAQAITDYAAILLYIKEKYNAR--HSPVIVVGGSYGGM 198 (246)
Q Consensus 157 ~~~ylt~~q~l~D~~~~i~~l~~~~~~~--~~p~ilvG~S~GG~ 198 (246)
.+.-.+.++...-+..|-+.+++++... -.++.|+|||++..
T Consensus 73 ~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 73 TLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 4455566666666666667888776432 23799999999887
No 236
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=57.74 E-value=44 Score=29.71 Aligned_cols=87 Identities=17% Similarity=0.204 Sum_probs=48.5
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccc--cCCC----CCCChhhh----h-cccccCCCCCHHHHHH
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYY--GKSI----PFGSREEA----L-KNASTLGYFNSAQAIT 168 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~--G~S~----p~~~~~~~----~-~~~~~~~ylt~~q~l~ 168 (246)
|+++.|-.++.-+ .+..++++++++.+|..|-+-. |.+. |....... + ...+.-..++..+...
T Consensus 1 vi~i~G~t~~GKs-----~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~ 75 (287)
T TIGR00174 1 VIFIMGPTAVGKS-----QLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQT 75 (287)
T ss_pred CEEEECCCCCCHH-----HHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHH
Confidence 3567776666543 3556778888999999987533 3222 21100000 0 0001113346667777
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecCh
Q 025920 169 DYAAILLYIKEKYNARHSPVIVVGGSY 195 (246)
Q Consensus 169 D~~~~i~~l~~~~~~~~~p~ilvG~S~ 195 (246)
+....++.+..+ +...+++|+|.
T Consensus 76 ~a~~~i~~~~~~----g~~pi~vGGTg 98 (287)
T TIGR00174 76 LALNAIADITAR----GKIPLLVGGTG 98 (287)
T ss_pred HHHHHHHHHHhC----CCCEEEEcCcH
Confidence 777777776543 23468898873
No 237
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.69 E-value=53 Score=30.11 Aligned_cols=109 Identities=20% Similarity=0.224 Sum_probs=64.6
Q ss_pred CCCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHH
Q 025920 96 AIAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILL 175 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~ 175 (246)
...||+++.|+.|..+.+.. -...+-++.|+.++-+-.+-+=...+ .+...+ .+.+..+.+.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~---ky~~~Yq~~g~~~~~~tap~~~~~~~-----------~s~~~~----sl~~~~~~l~ 98 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLM---KYSKIYQDKGYIVVRITAPCPSVFLS-----------ASRRIL----SLSLASTRLS 98 (350)
T ss_pred ccccEEEEeeeccccchhHH---HHHHHHhcCCceEEEecCcccccccc-----------cccccc----hhhHHHHHHH
Confidence 34699999999999887432 33445566777777765554433221 122222 2344444455
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHH---HHHH-C-C---CceeEEEEecCccc
Q 025920 176 YIKEKYNARHSPVIVVGGSYGGMLATW---FRLK-Y-P---HVALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~p~ilvG~S~GG~la~~---~~~~-y-P---~~v~g~i~sSap~~ 222 (246)
.+.+.++.+..|++.---|+||..... ++.. . | +...+.+-.|+|..
T Consensus 99 ~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 99 ELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred HHhhhccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 555555556778888899999854433 3322 2 3 34556777777765
No 238
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=56.57 E-value=58 Score=29.13 Aligned_cols=87 Identities=15% Similarity=0.157 Sum_probs=51.0
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhh-----------cccccCCCCCHHHH
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEAL-----------KNASTLGYFNSAQA 166 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~-----------~~~~~~~ylt~~q~ 166 (246)
.+|+++.|-.++.-+ ..-.++|++ +..+|..|-+-.=+-.+.+....+. ...+.-..++..+.
T Consensus 4 ~~ii~I~GpTasGKS-----~LAl~LA~~-~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f 77 (300)
T PRK14729 4 NKIVFIFGPTAVGKS-----NILFHFPKG-KAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIF 77 (300)
T ss_pred CcEEEEECCCccCHH-----HHHHHHHHh-CCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHH
Confidence 468888887776644 345678888 5689999966432222211100000 00111233577778
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecC
Q 025920 167 ITDYAAILLYIKEKYNARHSPVIVVGGS 194 (246)
Q Consensus 167 l~D~~~~i~~l~~~~~~~~~p~ilvG~S 194 (246)
..|....++.+..+ +...+|+|+|
T Consensus 78 ~~~a~~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 78 YKEALKIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHHHHHC----CCCEEEEeCc
Confidence 88888888877653 2345888887
No 239
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=51.04 E-value=11 Score=25.52 Aligned_cols=19 Identities=16% Similarity=0.260 Sum_probs=10.2
Q ss_pred CCCcEEEEeCCCCCCCccc
Q 025920 96 AIAPIFVYLGAEEALDGDI 114 (246)
Q Consensus 96 ~~~PI~l~hGg~g~~~~~~ 114 (246)
+++||++.||-.+++..|.
T Consensus 42 ~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T--EEEEE--TT--GGGGC
T ss_pred CCCcEEEECCcccChHHHH
Confidence 4678999999888887764
No 240
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=45.98 E-value=29 Score=27.94 Aligned_cols=43 Identities=19% Similarity=0.341 Sum_probs=26.2
Q ss_pred CCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025920 128 NALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGG 197 (246)
Q Consensus 128 g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG 197 (246)
|..|+++|-||==.|+ +.++.+++.++.. + ..=.+++|+|+|=
T Consensus 67 ~~~vi~Ld~~Gk~~sS------------------------e~fA~~l~~~~~~-G--~~i~f~IGG~~Gl 109 (155)
T COG1576 67 GSYVVLLDIRGKALSS------------------------EEFADFLERLRDD-G--RDISFLIGGADGL 109 (155)
T ss_pred CCeEEEEecCCCcCCh------------------------HHHHHHHHHHHhc-C--CeEEEEEeCcccC
Confidence 6789999999744332 2233334444432 1 2247999999994
No 241
>PLN02165 adenylate isopentenyltransferase
Probab=45.16 E-value=1e+02 Score=28.07 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=26.9
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccc
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHR 137 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~R 137 (246)
.+.++++.|-.|+..+ .....+|...++.++..|-.
T Consensus 42 ~g~iivIiGPTGSGKS-----tLA~~LA~~l~~eIIsaDs~ 77 (334)
T PLN02165 42 KDKVVVIMGATGSGKS-----RLSVDLATRFPSEIINSDKM 77 (334)
T ss_pred CCCEEEEECCCCCcHH-----HHHHHHHHHcCCceecCChh
Confidence 4668889998777654 24456888888888888866
No 242
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=42.87 E-value=93 Score=26.75 Aligned_cols=101 Identities=20% Similarity=0.136 Sum_probs=57.4
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEcccc----ccCC--CC---CCChh------hhh--ccc-ccC
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRY----YGKS--IP---FGSRE------EAL--KNA-STL 158 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg----~G~S--~p---~~~~~------~~~--~~~-~~~ 158 (246)
+.-|+.+||...+...+..-+|-+.+..+.. +.++++|-+- -+.+ .+ ..... ..+ .+. ..-
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 4568999999998888877677777777666 7788887761 1111 11 00000 000 000 111
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025920 159 GYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRL 205 (246)
Q Consensus 159 ~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~ 205 (246)
.|...+..++ .+.++++++-.-+ -|+|.|=|+.+++.+..
T Consensus 84 ~~~~~eesl~---yl~~~i~enGPFD----GllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 84 EYFGFEESLE---YLEDYIKENGPFD----GLLGFSQGAALAALLAG 123 (230)
T ss_pred cccChHHHHH---HHHHHHHHhCCCc----cccccchhHHHHHHhhc
Confidence 2223333333 3344555443222 58999999999999876
No 243
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=41.78 E-value=72 Score=27.08 Aligned_cols=37 Identities=22% Similarity=0.110 Sum_probs=25.1
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccC
Q 025920 187 PVIVVGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 225 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP~~v~g~i~sSap~~~~~ 225 (246)
.+.|+++|||=..|..+....| +..++|..+-....+
T Consensus 58 ~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pid 94 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPID 94 (213)
T ss_pred eEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCCcC
Confidence 6999999999888877765554 455665554333343
No 244
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=38.80 E-value=2.7e+02 Score=24.33 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025920 173 ILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 173 ~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
..+.+.+++. +...+.++|.|-|+..|-.++..
T Consensus 80 ay~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 80 AYRFLSKNYE-PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHhccC-CcceEEEEecCccHHHHHHHHHH
Confidence 3444555553 45579999999999999888743
No 245
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.43 E-value=1.2e+02 Score=29.39 Aligned_cols=43 Identities=23% Similarity=0.176 Sum_probs=32.0
Q ss_pred CCCCEEEEecChHHHHHHHHHH-----HCCCceeEEEEecCcccccCC
Q 025920 184 RHSPVIVVGGSYGGMLATWFRL-----KYPHVALGALASSAPILYFDD 226 (246)
Q Consensus 184 ~~~p~ilvG~S~GG~la~~~~~-----~yP~~v~g~i~sSap~~~~~~ 226 (246)
.+.|+.|+|.|.|+.+...-.. +-=+++.-+++.+||+.....
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 5679999999999988764322 234567888999999865543
No 246
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=35.62 E-value=1.2e+02 Score=21.52 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHcCCCC-CCEEEEecChHHHHHHHHHHHCCC
Q 025920 167 ITDYAAILLYIKEKYNARH-SPVIVVGGSYGGMLATWFRLKYPH 209 (246)
Q Consensus 167 l~D~~~~i~~l~~~~~~~~-~p~ilvG~S~GG~la~~~~~~yP~ 209 (246)
.+.+.+-|++++.+...+. .++.++|.|-|=.||...+..+--
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 3444455666665432222 379999999999999888777643
No 247
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.34 E-value=61 Score=28.86 Aligned_cols=36 Identities=19% Similarity=0.091 Sum_probs=25.8
Q ss_pred CCEEEEecChHHHHHHHHHHHC---CCceeEEEEecCcc
Q 025920 186 SPVIVVGGSYGGMLATWFRLKY---PHVALGALASSAPI 221 (246)
Q Consensus 186 ~p~ilvG~S~GG~la~~~~~~y---P~~v~g~i~sSap~ 221 (246)
.+++|+|.|+|+.-+....... -+.++|++.+++|-
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 3799999999987666543322 24578999888775
No 248
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=35.20 E-value=1.9e+02 Score=25.73 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=51.0
Q ss_pred HHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHH
Q 025920 119 FLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGM 198 (246)
Q Consensus 119 ~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~ 198 (246)
.+.++.++.|.+|+++=||- -..+-++- .-.++. .+.|...+++.++... ++.++.++=|+.||.
T Consensus 39 ~i~~ie~kr~srvI~~Ihrq-e~~~~~gi--------Pi~~~I----~i~dse~v~raI~~~~--~~~~IdLii~TpGG~ 103 (285)
T PF01972_consen 39 LIREIEEKRGSRVITLIHRQ-ERVSFLGI--------PIYRYI----DIDDSEFVLRAIREAP--KDKPIDLIIHTPGGL 103 (285)
T ss_pred HHHHHHHHhCCEEEEEEEec-cccceecc--------ccceeE----cHhhHHHHHHHHHhcC--CCCceEEEEECCCCc
Confidence 55667778899999998873 11111110 011222 2467777778777543 345788888999998
Q ss_pred HHHHH-----HHHCCCceeEEE
Q 025920 199 LATWF-----RLKYPHVALGAL 215 (246)
Q Consensus 199 la~~~-----~~~yP~~v~g~i 215 (246)
+-+.. ..++|..+...|
T Consensus 104 v~AA~~I~~~l~~~~~~v~v~V 125 (285)
T PF01972_consen 104 VDAAEQIARALREHPAKVTVIV 125 (285)
T ss_pred HHHHHHHHHHHHhCCCCEEEEE
Confidence 76653 456787766555
No 249
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=33.92 E-value=61 Score=29.00 Aligned_cols=21 Identities=29% Similarity=0.265 Sum_probs=17.6
Q ss_pred EEEEecChHHHHHHHHHHHCC
Q 025920 188 VIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 188 ~ilvG~S~GG~la~~~~~~yP 208 (246)
=.+.|.|.||.+|+.++..++
T Consensus 34 D~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 34 DWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred cEEEeeChHHHHHHHHHcCCC
Confidence 378999999999999986543
No 250
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=32.77 E-value=56 Score=26.20 Aligned_cols=53 Identities=21% Similarity=0.263 Sum_probs=28.1
Q ss_pred cCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025920 127 FNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLK 206 (246)
Q Consensus 127 ~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~ 206 (246)
.+..+|++|-+|-=-|+ .++++.++....+- ...-++++|+|+| +.-.++.+
T Consensus 66 ~~~~~i~Ld~~Gk~~sS------------------------~~fA~~l~~~~~~g--~~~i~F~IGG~~G--~~~~~~~~ 117 (155)
T PF02590_consen 66 PNDYVILLDERGKQLSS------------------------EEFAKKLERWMNQG--KSDIVFIIGGADG--LSEEVRKR 117 (155)
T ss_dssp TTSEEEEE-TTSEE--H------------------------HHHHHHHHHHHHTT--S-EEEEEE-BTTB----HHHHHH
T ss_pred CCCEEEEEcCCCccCCh------------------------HHHHHHHHHHHhcC--CceEEEEEecCCC--CCHHHHhh
Confidence 36789999988754432 34455555554332 1224899999998 55555544
Q ss_pred C
Q 025920 207 Y 207 (246)
Q Consensus 207 y 207 (246)
.
T Consensus 118 a 118 (155)
T PF02590_consen 118 A 118 (155)
T ss_dssp -
T ss_pred c
Confidence 3
No 251
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=32.23 E-value=89 Score=25.11 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=26.2
Q ss_pred CCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025920 128 NALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGG 197 (246)
Q Consensus 128 g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG 197 (246)
+..+|++|-+|-=.|+ .+++++++...... ...-++++|+++|=
T Consensus 67 ~~~~i~LDe~Gk~~sS------------------------~~fA~~l~~~~~~g--~~~i~F~IGGa~G~ 110 (157)
T PRK00103 67 GARVIALDERGKQLSS------------------------EEFAQELERWRDDG--RSDVAFVIGGADGL 110 (157)
T ss_pred CCEEEEEcCCCCcCCH------------------------HHHHHHHHHHHhcC--CccEEEEEcCcccc
Confidence 4568999998743332 33444455443211 12358999999994
No 252
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=31.39 E-value=1.4e+02 Score=23.95 Aligned_cols=48 Identities=10% Similarity=-0.028 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEE
Q 025920 164 AQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGAL 215 (246)
Q Consensus 164 ~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i 215 (246)
++..+++.++++.++.+ +.++.++|.|-.|..-+.+.-..++.+..++
T Consensus 51 ~~~~~~l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 45556666666666653 4579999999999988888766666554443
No 253
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=29.50 E-value=66 Score=25.68 Aligned_cols=27 Identities=22% Similarity=0.253 Sum_probs=21.4
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeE
Q 025920 187 PVIVVGGSYGGMLATWFRLKYPHVALG 213 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP~~v~g 213 (246)
+++++|++.+|+.++..+.+....+.-
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~~~v~i 27 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPGAKVLI 27 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEE
T ss_pred CEEEEecHHHHHHHHHHHhcCCCeEEE
Confidence 379999999999999988865554433
No 254
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=29.37 E-value=90 Score=25.01 Aligned_cols=44 Identities=18% Similarity=0.114 Sum_probs=26.9
Q ss_pred CCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHH
Q 025920 128 NALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVGGSYGGM 198 (246)
Q Consensus 128 g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~ 198 (246)
+..||++|-+|-=.|+ .+++.+++...... ..-++++|+++|=.
T Consensus 65 ~~~~i~LDe~Gk~~sS------------------------~~fA~~l~~~~~~g---~~i~FvIGGa~G~~ 108 (153)
T TIGR00246 65 KAHVVTLDIPGKPWTT------------------------PQLADTLEKWKTDG---RDVTLLIGGPEGLS 108 (153)
T ss_pred CCeEEEEcCCCCcCCH------------------------HHHHHHHHHHhccC---CeEEEEEcCCCcCC
Confidence 4679999998744332 33444455443221 23689999999943
No 255
>PRK02399 hypothetical protein; Provisional
Probab=28.43 E-value=2e+02 Score=26.98 Aligned_cols=112 Identities=16% Similarity=0.081 Sum_probs=58.3
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhh-hh-----cccccC-CCCCHHHH----HH
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREE-AL-----KNASTL-GYFNSAQA----IT 168 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~-~~-----~~~~~~-~ylt~~q~----l~ 168 (246)
-+++.|--....... .|+.+...+.|..|+.+|--..|......+.+. .. ...+.+ .-..-.++ .+
T Consensus 5 ~I~iigT~DTK~~E~---~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ 81 (406)
T PRK02399 5 RIYIAGTLDTKGEEL---AYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAE 81 (406)
T ss_pred EEEEEeccCCcHHHH---HHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHH
Confidence 366667555544332 477777777899999999833332211010000 00 000000 00011122 22
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEE
Q 025920 169 DYAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALA 216 (246)
Q Consensus 169 D~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~ 216 (246)
-+..+++.+-++-... -++-+|+|.|..+++-....-|=.+-+++.
T Consensus 82 ga~~~v~~L~~~g~i~--gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 82 GAAAFVRELYERGDVA--GVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHHHhcCCcc--EEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 2333444333332222 489999999999999988877766655554
No 256
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=28.41 E-value=83 Score=25.39 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=24.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025920 172 AILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP 208 (246)
.+++.+.++. -.+=++.|-|.|+++|+.++..++
T Consensus 16 Gvl~~L~e~~---~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 16 GALKALEEAG---ILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHcC---CCcceEEEECHHHHHHHHHHcCCC
Confidence 4455555432 124689999999999999998654
No 257
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=27.85 E-value=71 Score=27.73 Aligned_cols=24 Identities=21% Similarity=0.167 Sum_probs=19.5
Q ss_pred CEEEEecChHHHHHHHHHHHCCCc
Q 025920 187 PVIVVGGSYGGMLATWFRLKYPHV 210 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP~~ 210 (246)
+|+++|++.+|..++....+.-..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G~~ 26 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAGID 26 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTCE
T ss_pred eEEEECCCHHHHHHHHHHHhcccc
Confidence 599999999999999999998654
No 258
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=27.29 E-value=33 Score=26.00 Aligned_cols=17 Identities=12% Similarity=0.124 Sum_probs=9.6
Q ss_pred CCcEEEEeCCCCCCCcc
Q 025920 97 IAPIFVYLGAEEALDGD 113 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~ 113 (246)
..|++|+||.+|+.-.+
T Consensus 92 aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 92 AIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp -EEEEEE--SS--GGGG
T ss_pred CeEEEEECCCCccHHhH
Confidence 46999999999986554
No 259
>PRK13690 hypothetical protein; Provisional
Probab=27.19 E-value=1.5e+02 Score=24.57 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChH
Q 025920 164 AQAITDYAAILLYIKEKYNARHSPVIVVGGSYG 196 (246)
Q Consensus 164 ~q~l~D~~~~i~~l~~~~~~~~~p~ilvG~S~G 196 (246)
++.-++....++++.++-...+..++++|+|-.
T Consensus 4 ~~i~~~~~~~~~El~~~a~l~~g~i~VvGcSTS 36 (184)
T PRK13690 4 EEIKKQTRQILEELLEQANLKPGQIFVLGCSTS 36 (184)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCEEEEecchH
Confidence 355666777777777666666668999999953
No 260
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=26.26 E-value=42 Score=26.75 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=15.9
Q ss_pred cChHHHHHHHHHHHCCC
Q 025920 193 GSYGGMLATWFRLKYPH 209 (246)
Q Consensus 193 ~S~GG~la~~~~~~yP~ 209 (246)
+.||+.+|..++.+||+
T Consensus 29 g~mG~GIA~~~k~~~P~ 45 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQ 45 (154)
T ss_pred CcCChHHHHHHHHHcCh
Confidence 58999999999999995
No 261
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=26.24 E-value=3.5e+02 Score=22.39 Aligned_cols=21 Identities=14% Similarity=0.214 Sum_probs=17.8
Q ss_pred CEEEEecCh----HHHHHHHHHHHC
Q 025920 187 PVIVVGGSY----GGMLATWFRLKY 207 (246)
Q Consensus 187 p~ilvG~S~----GG~la~~~~~~y 207 (246)
.++++|+|. |+.++...+.+-
T Consensus 110 ~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 110 DLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CEEEEcCCcccCCcCcHHHHHHHHh
Confidence 599999999 888998887764
No 262
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=24.07 E-value=6e+02 Score=23.82 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=61.3
Q ss_pred EEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhh-hh--c---ccccCCCC-CHHHHHHH---
Q 025920 100 IFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREE-AL--K---NASTLGYF-NSAQAITD--- 169 (246)
Q Consensus 100 I~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~-~~--~---~~~~~~yl-t~~q~l~D--- 169 (246)
-+++.|--...... ..++.+...+.|..++.+|-==.|.+....+.+. .. . ..+.+... +-.++++-
T Consensus 3 tI~iigT~DTK~~E---~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ 79 (403)
T PF06792_consen 3 TIAIIGTLDTKGEE---LLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMAR 79 (403)
T ss_pred EEEEEEccCCCHHH---HHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHH
Confidence 35556655444333 2477787888999999999765555432211110 00 0 00111111 22233332
Q ss_pred -HHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEe
Q 025920 170 -YAAILLYIKEKYNARHSPVIVVGGSYGGMLATWFRLKYPHVALGALAS 217 (246)
Q Consensus 170 -~~~~i~~l~~~~~~~~~p~ilvG~S~GG~la~~~~~~yP~~v~g~i~s 217 (246)
+..++..+-.+-... -++-+|+|.|..+++.....-|=.+-+++.|
T Consensus 80 ga~~~v~~l~~~g~i~--Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 80 GAARFVSDLYDEGKID--GVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHHHhcCCcc--EEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 223333333322122 4899999999999999888888766666543
No 263
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=23.79 E-value=2.1e+02 Score=20.87 Aligned_cols=41 Identities=24% Similarity=0.203 Sum_probs=26.9
Q ss_pred CcEEEEeCCCCCCCccccchhHHHHHHHHcC-CeEEEEccccccCC
Q 025920 98 APIFVYLGAEEALDGDISVIGFLTDNAARFN-ALLVYIEHRYYGKS 142 (246)
Q Consensus 98 ~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g-~~Vi~~D~Rg~G~S 142 (246)
.||+++.+.......+. .-...+.+++ ..++..|--|||-.
T Consensus 35 ~piL~l~~~~Dp~TP~~----~a~~~~~~l~~s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYE----GARAMAARLPGSRLVTVDGAGHGVY 76 (103)
T ss_pred CCEEEEecCcCCCCcHH----HHHHHHHHCCCceEEEEeccCccee
Confidence 67777766555555432 2234455555 78999999999976
No 264
>PF13552 DUF4127: Protein of unknown function (DUF4127)
Probab=23.74 E-value=1.4e+02 Score=28.60 Aligned_cols=61 Identities=20% Similarity=0.342 Sum_probs=38.7
Q ss_pred hHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe
Q 025920 118 GFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLYIKEKYNARHSPVIVVG 192 (246)
Q Consensus 118 ~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~l~~~~~~~~~p~ilvG 192 (246)
.|+.+.+....+.|+..|.--||.=.+ +....++.+++.+-+ +.++.++++. ++.|+++++
T Consensus 50 ~Wl~~~~~~~d~~ViS~D~L~yGGLv~-----------SR~~~~~~~~~~~rl-~~l~~lk~~~--p~~~iyaf~ 110 (497)
T PF13552_consen 50 DWLEENAPDADAAVISTDMLLYGGLVP-----------SRIHHLSLEEALERL-ERLRELKARN--PNLPIYAFS 110 (497)
T ss_pred HHHHhccccCCEEEEEHHhhhhcCcHh-----------hcCCCCCHHHHHHHH-HHHHHHHHHC--CCCeEEEEE
Confidence 356666666778999999999996433 122333444554444 5567777765 455777665
No 265
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=23.71 E-value=1.1e+02 Score=24.45 Aligned_cols=23 Identities=22% Similarity=0.215 Sum_probs=19.8
Q ss_pred CEEEEecChHHHHHHHHHHHCCC
Q 025920 187 PVIVVGGSYGGMLATWFRLKYPH 209 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP~ 209 (246)
+-.+.|-|.|+.+++.++...+.
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCCH
Confidence 56899999999999999986553
No 266
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=23.67 E-value=2.4e+02 Score=23.06 Aligned_cols=60 Identities=17% Similarity=0.099 Sum_probs=34.5
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEccccccCCCCCCChhhhhcccccCCCCCHHHHHHHHHHHHHH
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSREEALKNASTLGYFNSAQAITDYAAILLY 176 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G~S~p~~~~~~~~~~~~~~~ylt~~q~l~D~~~~i~~ 176 (246)
+.||++.||-....-.... ..-..+..++.+..|-.-+..|-|.+.. .+.+.|+.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~-~~~~~~~L~~~~~~v~~~~~~g~gH~i~-------------------~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEW-AEKTAEFLKAAGANVEFHEYPGGGHEIS-------------------PEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHH-HHHHHHHHHCTT-GEEEEEETT-SSS---------------------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHH-HHHHHHHHHhcCCCEEEEEcCCCCCCCC-------------------HHHHHHHHHHHhh
Confidence 4689999998887655422 1233445556677777777666665542 2567888777764
No 267
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=23.30 E-value=1.1e+02 Score=27.30 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=18.8
Q ss_pred CEEEEecChHHHHHHHHHHHCC
Q 025920 187 PVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP 208 (246)
+=.+.|.|+|+.+++.++..++
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 4589999999999999987753
No 268
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=22.24 E-value=1.4e+02 Score=27.83 Aligned_cols=21 Identities=29% Similarity=0.346 Sum_probs=18.2
Q ss_pred CEEEEecChHHHHHHHHHHHC
Q 025920 187 PVIVVGGSYGGMLATWFRLKY 207 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~y 207 (246)
+++++|+++||+-++....+.
T Consensus 3 ~VVIIGgG~aG~~aA~~l~~~ 23 (438)
T PRK13512 3 KIIVVGAVAGGATCASQIRRL 23 (438)
T ss_pred eEEEECCcHHHHHHHHHHHhh
Confidence 699999999999999877654
No 269
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=20.99 E-value=94 Score=26.56 Aligned_cols=19 Identities=26% Similarity=0.515 Sum_probs=14.2
Q ss_pred CCEEEEecChHHHHHHHHH
Q 025920 186 SPVIVVGGSYGGMLATWFR 204 (246)
Q Consensus 186 ~p~ilvG~S~GG~la~~~~ 204 (246)
..++++|||+|..=.-++.
T Consensus 235 ~~I~i~GhSl~~~D~~Yf~ 253 (270)
T PF14253_consen 235 DEIIIYGHSLGEVDYPYFE 253 (270)
T ss_pred CEEEEEeCCCchhhHHHHH
Confidence 4699999999986555443
No 270
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.73 E-value=1.4e+02 Score=25.08 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=19.0
Q ss_pred CEEEEecChHHHHHHHHHHHCC
Q 025920 187 PVIVVGGSYGGMLATWFRLKYP 208 (246)
Q Consensus 187 p~ilvG~S~GG~la~~~~~~yP 208 (246)
+-.+.|-|.|+.+++.++..++
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCCC
Confidence 4589999999999999997654
No 271
>PRK11460 putative hydrolase; Provisional
Probab=20.49 E-value=4.2e+02 Score=22.09 Aligned_cols=43 Identities=9% Similarity=0.002 Sum_probs=24.9
Q ss_pred CCcEEEEeCCCCCCCccccchhHHHHHHHHcCCeEEEEcccccc
Q 025920 97 IAPIFVYLGAEEALDGDISVIGFLTDNAARFNALLVYIEHRYYG 140 (246)
Q Consensus 97 ~~PI~l~hGg~g~~~~~~~~~~~~~~~a~~~g~~Vi~~D~Rg~G 140 (246)
+.||+++||.....-.... ...+.+..++.|..+-.....+-|
T Consensus 148 ~~pvli~hG~~D~vvp~~~-~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAH-AVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCcEEEEecCCCCccCHHH-HHHHHHHHHHCCCCeEEEEECCCC
Confidence 5799999998877655432 123344445556655554444333
Done!