Query 025921
Match_columns 246
No_of_seqs 125 out of 135
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 20:39:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025921.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025921hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ev1_A Anabena TIC22; TIC22 fo 100.0 1.2E-45 4E-50 330.9 20.1 169 70-242 2-201 (252)
2 4e6z_A Apicoplast TIC22, putat 100.0 2.3E-42 7.8E-47 313.7 16.5 166 68-238 63-248 (279)
3 4ev1_A Anabena TIC22; TIC22 fo 99.5 1.7E-14 5.9E-19 129.2 6.8 118 53-174 101-227 (252)
4 4e6z_A Apicoplast TIC22, putat 99.1 1.1E-10 3.8E-15 105.8 9.3 109 53-171 163-272 (279)
5 2lrn_A Thiol:disulfide interch 81.9 12 0.0004 28.2 9.5 124 82-219 9-143 (152)
6 3or5_A Thiol:disulfide interch 77.0 20 0.00067 26.9 9.3 128 81-219 13-153 (165)
7 4eo3_A Bacterioferritin comigr 70.9 4.3 0.00015 36.3 4.7 75 79-161 1-86 (322)
8 2yzh_A Probable thiol peroxida 70.2 17 0.00059 28.1 7.6 77 81-159 26-110 (171)
9 4hde_A SCO1/SENC family lipopr 62.9 7.4 0.00025 30.8 4.1 61 81-142 11-77 (170)
10 1psq_A Probable thiol peroxida 58.1 14 0.00047 28.5 4.8 77 81-159 21-105 (163)
11 3fkf_A Thiol-disulfide oxidore 56.1 50 0.0017 23.9 7.5 124 81-218 10-147 (148)
12 1q98_A Thiol peroxidase, TPX; 55.1 28 0.00095 26.8 6.2 75 81-160 22-107 (165)
13 2z0r_A Putative uncharacterize 53.9 20 0.0007 27.6 4.9 53 79-140 5-57 (103)
14 3fw2_A Thiol-disulfide oxidore 53.4 66 0.0022 23.8 8.5 123 81-217 10-148 (150)
15 3p7x_A Probable thiol peroxida 50.8 23 0.00077 27.3 5.0 77 81-160 25-109 (166)
16 3zrd_A Thiol peroxidase; oxido 50.3 31 0.0011 28.0 6.0 75 80-160 56-142 (200)
17 3drn_A Peroxiredoxin, bacterio 48.8 31 0.001 26.3 5.5 77 81-160 7-94 (161)
18 3ha9_A Uncharacterized thiored 44.0 98 0.0034 23.1 7.9 56 81-142 16-77 (165)
19 3me7_A Putative uncharacterize 41.9 1.2E+02 0.004 23.4 12.0 134 81-219 6-164 (170)
20 3lwa_A Secreted thiol-disulfid 39.4 1.3E+02 0.0043 23.0 9.0 126 80-217 35-181 (183)
21 2wfc_A Peroxiredoxin 5, PRDX5; 39.4 26 0.0009 27.6 3.8 76 81-160 8-100 (167)
22 2jsy_A Probable thiol peroxida 39.0 25 0.00085 26.8 3.5 78 81-159 23-107 (167)
23 1xvw_A Hypothetical protein RV 38.1 61 0.0021 24.2 5.6 78 81-159 14-100 (160)
24 3kcm_A Thioredoxin family prot 37.8 72 0.0024 23.4 5.9 123 81-219 7-145 (154)
25 1xvq_A Thiol peroxidase; thior 36.1 60 0.002 25.2 5.4 128 81-219 23-167 (175)
26 3gl3_A Putative thiol:disulfid 35.4 75 0.0026 23.2 5.6 122 81-219 8-144 (152)
27 4g2e_A Peroxiredoxin; redox pr 34.4 13 0.00046 28.7 1.2 77 81-161 9-96 (157)
28 2ggt_A SCO1 protein homolog, m 33.3 27 0.00091 26.2 2.8 131 82-218 3-162 (164)
29 3ia1_A THIO-disulfide isomeras 32.7 1.2E+02 0.004 22.3 6.4 122 81-219 10-146 (154)
30 2b7k_A SCO1 protein; metalloch 32.6 58 0.002 26.0 4.9 77 82-159 21-112 (200)
31 3bid_A UPF0339 protein NMB1088 31.9 63 0.0022 22.5 4.3 40 81-129 11-50 (64)
32 3fk8_A Disulphide isomerase; A 31.4 25 0.00085 25.7 2.3 49 74-124 79-132 (133)
33 3kij_A Probable glutathione pe 30.7 92 0.0031 24.1 5.7 58 81-142 17-80 (180)
34 1xzo_A BSSCO, hypothetical pro 30.1 44 0.0015 25.3 3.6 61 81-142 12-78 (174)
35 3mng_A Peroxiredoxin-5, mitoch 29.7 51 0.0018 26.3 4.0 77 81-161 20-113 (173)
36 2rli_A SCO2 protein homolog, m 29.0 51 0.0017 24.8 3.7 59 83-142 7-73 (171)
37 2lja_A Putative thiol-disulfid 28.2 69 0.0024 23.4 4.3 123 81-219 8-145 (152)
38 3erw_A Sporulation thiol-disul 27.8 1.6E+02 0.0056 20.8 9.1 59 80-143 13-77 (145)
39 3gkn_A Bacterioferritin comigr 26.6 26 0.00087 26.6 1.6 79 81-160 12-100 (163)
40 3hdc_A Thioredoxin family prot 26.0 1.4E+02 0.0049 22.1 5.9 78 80-160 19-103 (158)
41 1lu4_A Soluble secreted antige 25.9 1E+02 0.0034 21.8 4.7 118 81-215 3-134 (136)
42 3keb_A Probable thiol peroxida 25.2 47 0.0016 28.3 3.2 126 81-219 27-178 (224)
43 2f9s_A Thiol-disulfide oxidore 24.5 1.4E+02 0.0046 21.9 5.4 122 82-219 6-140 (151)
44 3raz_A Thioredoxin-related pro 24.2 1.7E+02 0.0059 21.4 6.0 48 73-129 93-144 (151)
45 2p31_A CL683, glutathione pero 24.1 1.4E+02 0.0046 23.1 5.5 58 81-142 28-91 (181)
46 3ewl_A Uncharacterized conserv 24.0 1.4E+02 0.0047 21.5 5.3 121 81-216 6-140 (142)
47 2v1m_A Glutathione peroxidase; 22.9 1.4E+02 0.0048 22.1 5.2 58 81-142 10-73 (169)
48 3ixr_A Bacterioferritin comigr 22.1 26 0.00088 27.6 0.8 75 82-160 31-116 (179)
49 3eur_A Uncharacterized protein 22.0 1.3E+02 0.0045 21.8 4.8 60 81-144 10-78 (142)
50 1jfu_A Thiol:disulfide interch 21.5 1.7E+02 0.0057 22.3 5.6 59 81-143 39-103 (186)
51 2k6v_A Putative cytochrome C o 20.9 86 0.0029 23.4 3.6 77 82-161 16-108 (172)
52 2pju_A Propionate catabolism o 20.8 3.4E+02 0.011 22.9 7.7 99 106-217 85-193 (225)
53 1zzo_A RV1677; thioredoxin fol 20.4 2E+02 0.007 19.9 5.5 120 81-217 4-135 (136)
No 1
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=100.00 E-value=1.2e-45 Score=330.93 Aligned_cols=169 Identities=22% Similarity=0.350 Sum_probs=154.2
Q ss_pred CChHHHHhhcCCCcEEEEEcCCCCeEEEeCCCC------CeeEEEEEecHHHHHHHHHHHHH---hcc---cccCCceEE
Q 025921 70 LSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNG------AKSIGLLCFRQEDAEAFLAQVRL---RRK---ELRSAAKVV 137 (246)
Q Consensus 70 L~~~eI~ekL~~VPVF~Vtn~~g~plli~~~~g------~~~v~~fFfs~eDAqa~L~qlk~---~nP---~la~~~kV~ 137 (246)
||++||+|||++||||+|||++|+||+++++++ +++|++||||++||++||+++|+ +|| ++++++||+
T Consensus 2 L~e~eV~ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~ 81 (252)
T 4ev1_A 2 LSEQQIKEKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYMSRQEAQAFINELRNAKNKDPKMQEIVKSLQVT 81 (252)
T ss_dssp CCHHHHHHHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEESCHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEE
T ss_pred CCHHHHHHHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEecHHHHHHHHHHHHhccccCchhhhhccCceEE
Confidence 899999999999999999999999999998872 46899999999999999999999 999 999999999
Q ss_pred EEehhhHhhh------hcCCeeEEEecCHHHHHHHHHHHhhccC--CCCCCCcEEeec------ceEEEeC--CeEEEee
Q 025921 138 PITLDQVYML------KVEGIAFRFLPDPAQIRNALELKAADVR--TGFDGVPVFQSE------LLVVKKK--NKRYCPV 201 (246)
Q Consensus 138 ~V~L~~Vy~l------k~~~~~f~fVP~~~qVe~A~~L~~~~gq--~~f~GVPVF~~~------~Lti~~~--~~~~iPl 201 (246)
+|+||+||++ +.+++.|+|||+++||++|++|++++|+ ++|+|||||++. +|||+++ |++||||
T Consensus 82 ~vsL~~vyql~~~~~~k~~~l~F~fvP~~~qV~~A~~Ll~~~Gq~~~~f~gVPvF~~~~~~~~~~Lti~~~~~~~~~iPl 161 (252)
T 4ev1_A 82 AVPLGVIYQQLQQTKKDPNRLLFAFKPVDQEIKGAMDLLRQSGQQVNQFKSVPMFAVRFAPDQGYVPIKVGTGNEQVVPL 161 (252)
T ss_dssp EEEHHHHHHHHHHTTTCTTCEEEEEECCHHHHHHHHHHHHTTTCCCSCCCSCEEEEEESSTTSCBCCEEETTTTEEEEEE
T ss_pred EeeHHHHHHHHHhhccCCcCceEEEcCCHHHHHHHHHHHHHcCCCcccCCCccEEEEecCCCCccEEEEeCCCCCEEEee
Confidence 9999999999 4578999999999999999999999987 568899999976 7999999 9999999
Q ss_pred eecHHHHHHHHHHHhhhcCCCCCCcceeechhh---hhhhhccc
Q 025921 202 YFQKEDIEKELSKVSRASRGAGVSQHIMVEKHL---ITFICSFE 242 (246)
Q Consensus 202 FF~KedL~~~l~k~~k~~~~P~~~~~i~v~sl~---~~~~~~~~ 242 (246)
||+||||+++|+++++++ |+ .+|+|.+|- .+|-.+++
T Consensus 162 FF~KedL~~~l~~~kkq~--P~--~~I~V~~Le~vI~~m~~~~d 201 (252)
T 4ev1_A 162 FLSKQDAQGLLGQVKPKH--PK--ADIQVLDIDGVLQTLQDKND 201 (252)
T ss_dssp ESSHHHHHHHHHHHTTTC--TT--CEEEEEEHHHHHHHHHHCCC
T ss_pred EecHHHHHHHHHHHHHhC--CC--CcEEEeeHHHHHHHHhcCcc
Confidence 999999999999999999 88 789988764 44444444
No 2
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.3e-42 Score=313.75 Aligned_cols=166 Identities=19% Similarity=0.283 Sum_probs=146.2
Q ss_pred ccCChHHHHhhcCCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHH-hcccccCCceEEEEehhhHhh
Q 025921 68 ATLSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRL-RRKELRSAAKVVPITLDQVYM 146 (246)
Q Consensus 68 ~AL~~~eI~ekL~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~eDAqa~L~qlk~-~nP~la~~~kV~~V~L~~Vy~ 146 (246)
.++++++|+|||++||||+|||++|+||++++++ ++|++||||++||+++|+++++ ++|++++++||++++|++||+
T Consensus 63 ~~~~e~~I~EKL~~VPVF~Itn~~G~Pll~~~~~--~~V~~fF~s~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~kvy~ 140 (279)
T 4e6z_A 63 KRYDERPIEEKLEVIPVFLITNYNSSPYIFQENE--KQVCYMFLCPYDAENMLNDMIKYNGMKYNGNIKIHNITMKKAYE 140 (279)
T ss_dssp -----CCHHHHSTTSEEEEEECTTCCBCCEEETT--EEEEEEESSHHHHHHHHHHHHHHCHHHHTTSCEEEEEEHHHHHH
T ss_pred hcccHHhHHHHhcCCCEEEEEcCCCCEEEecCCC--CeEEEEECCHHHHHHHHHHHHhccCcccccCceEEEecHHHHHH
Confidence 4899999999999999999999999999998764 6899999999999999999755 558999999999999999998
Q ss_pred h------------------hcCCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEEEeeeecHHHH
Q 025921 147 L------------------KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDI 208 (246)
Q Consensus 147 l------------------k~~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~iPlFF~KedL 208 (246)
+ +.+++.|+|+|+++||++|+.+++++|++ ++|||||++++|||++++++++|+||+||||
T Consensus 141 l~~~~~~~~~~~i~~~~~~k~~~l~fr~vP~~~qV~~A~~ll~~~gq~-~~gVPVF~~~~Lti~k~~k~iiPlFF~keDL 219 (279)
T 4e6z_A 141 LMKEFLQLEKMEVNKEDSKKKQNIYWKLISSKRQLQNALYYLSFTKKS-ELMYPVFYAENLYIQKDGSNIIPLFFDLEDL 219 (279)
T ss_dssp HHHHHHHHHHC----------CCEEEEEECCHHHHHHHHTTSCTTTST-TCCSEEEEETTCCEECSSSEEEEEESSHHHH
T ss_pred HHhhcccccchhcccccccCCcceeeEecCCHHHHHHHHHHHHhcCCc-CCCccEEEEeeEEEeeCCeEEEeeEecHHHH
Confidence 8 22579999999999999999999888865 8899999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCC-Ccceeechhhhhhh
Q 025921 209 EKELSKVSRASRGAGV-SQHIMVEKHLITFI 238 (246)
Q Consensus 209 ~~~l~k~~k~~~~P~~-~~~i~v~sl~~~~~ 238 (246)
+++|+++++++ |+. .++|+|.+|..++.
T Consensus 220 ~~~l~q~~~~~--p~~~~~~I~V~~L~~ll~ 248 (279)
T 4e6z_A 220 KEAIEEQKNKA--LSKVDYKIKVLNMVDLIF 248 (279)
T ss_dssp HHHHHHHHTTC--SSCCCCCEEEEEHHHHHT
T ss_pred HHHHHHhhhcC--CCCCCCceEEEhHHHHHh
Confidence 99999999988 543 37899999977764
No 3
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=99.50 E-value=1.7e-14 Score=129.18 Aligned_cols=118 Identities=18% Similarity=0.227 Sum_probs=97.2
Q ss_pred CCCeeeeccchh-hhhccCChH--HHHhhcCCCcEEEEEc-CCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhcc
Q 025921 53 VPPFAFLSQPKQ-ALAATLSSD--FVSKTLAGTAVYTVSN-SSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRK 128 (246)
Q Consensus 53 ~p~fa~v~~~~~-~~a~AL~~~--eI~ekL~~VPVF~Vtn-~~g~plli~~~~g~~~v~~fFfs~eDAqa~L~qlk~~nP 128 (246)
.-.|+++|.+++ ..|+.|..+ +-.+.+.|||||.+.. .++++|++...+|++.++||||+++|++++|+++++++|
T Consensus 101 ~l~F~fvP~~~qV~~A~~Ll~~~Gq~~~~f~gVPvF~~~~~~~~~~Lti~~~~~~~~~iPlFF~KedL~~~l~~~kkq~P 180 (252)
T 4ev1_A 101 RLLFAFKPVDQEIKGAMDLLRQSGQQVNQFKSVPMFAVRFAPDQGYVPIKVGTGNEQVVPLFLSKQDAQGLLGQVKPKHP 180 (252)
T ss_dssp CEEEEEECCHHHHHHHHHHHHTTTCCCSCCCSCEEEEEESSTTSCBCCEEETTTTEEEEEEESSHHHHHHHHHHHTTTCT
T ss_pred CceEEEcCCHHHHHHHHHHHHHcCCCcccCCCccEEEEecCCCCccEEEEeCCCCCEEEeeEecHHHHHHHHHHHHHhCC
Confidence 578999999887 677777655 3456788999999995 556888886544468899999999999999999999999
Q ss_pred cccCCceEEEEehhhHhhh--hc-C--CeeEEEecCHHHHHHHHHHHhhcc
Q 025921 129 ELRSAAKVVPITLDQVYML--KV-E--GIAFRFLPDPAQIRNALELKAADV 174 (246)
Q Consensus 129 ~la~~~kV~~V~L~~Vy~l--k~-~--~~~f~fVP~~~qVe~A~~L~~~~g 174 (246)
+ .+|.+++|+.+++. .+ + --.++|||+.+.+++++++.++.+
T Consensus 181 ~----~~I~V~~Le~vI~~m~~~~d~~~~~ivfiPs~es~e~i~~~~~~~~ 227 (252)
T 4ev1_A 181 K----ADIQVLDIDGVLQTLQDKNDTWLNQVVLVPSPESREYIRTLPKPPN 227 (252)
T ss_dssp T----CEEEEEEHHHHHHHHHHCCCGGGGGEEEECCHHHHHHHHTSCCCC-
T ss_pred C----CcEEEeeHHHHHHHHhcCcccccceEEEECCHHHHHHHHhccccCC
Confidence 7 89999999999987 22 2 247899999999999999875444
No 4
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=99.14 E-value=1.1e-10 Score=105.82 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=88.1
Q ss_pred CCCeeeeccchh-hhhccCChHHHHhhcCCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhccccc
Q 025921 53 VPPFAFLSQPKQ-ALAATLSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKELR 131 (246)
Q Consensus 53 ~p~fa~v~~~~~-~~a~AL~~~eI~ekL~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~eDAqa~L~qlk~~nP~la 131 (246)
.-.|.++|...+ ..|..+..+.- +.-.|||||.+.+ +++.. |++.++|+||+++|+++.++++++++|+ .
T Consensus 163 ~l~fr~vP~~~qV~~A~~ll~~~g-q~~~gVPVF~~~~-----Lti~k--~~k~iiPlFF~keDL~~~l~q~~~~~p~-~ 233 (279)
T 4e6z_A 163 NIYWKLISSKRQLQNALYYLSFTK-KSELMYPVFYAEN-----LYIQK--DGSNIIPLFFDLEDLKEAIEEQKNKALS-K 233 (279)
T ss_dssp CEEEEEECCHHHHHHHHTTSCTTT-STTCCSEEEEETT-----CCEEC--SSSEEEEEESSHHHHHHHHHHHHTTCSS-C
T ss_pred ceeeEecCCHHHHHHHHHHHHhcC-CcCCCccEEEEee-----EEEee--CCeEEEeeEecHHHHHHHHHHhhhcCCC-C
Confidence 467999999877 67777766643 3467899999963 66644 3467999999999999999999999997 5
Q ss_pred CCceEEEEehhhHhhhhcCCeeEEEecCHHHHHHHHHHHh
Q 025921 132 SAAKVVPITLDQVYMLKVEGIAFRFLPDPAQIRNALELKA 171 (246)
Q Consensus 132 ~~~kV~~V~L~~Vy~lk~~~~~f~fVP~~~qVe~A~~L~~ 171 (246)
...+|.+++|..+..-.+ .-.|.|||+++.+++++++..
T Consensus 234 ~~~~I~V~~L~~ll~~~d-~~kivFIPs~eSlefi~~l~~ 272 (279)
T 4e6z_A 234 VDYKIKVLNMVDLIFTED-HKKFGFVPSTQSVKYLDKLNI 272 (279)
T ss_dssp CCCCEEEEEHHHHHTCSC-CTTEEEECCHHHHHHHHHHHH
T ss_pred CCCceEEEhHHHHHhhCC-cCeEEEECCHHHHHHHHHHhc
Confidence 568899999999886533 337899999999999999854
No 5
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=81.95 E-value=12 Score=28.20 Aligned_cols=124 Identities=10% Similarity=0.097 Sum_probs=71.7
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhh----h-hcC
Q 025921 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYM----L-KVE 150 (246)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~----l-k~~ 150 (246)
+|-|.+.|.+|..+..+.-.|. -+...|. ++.. ...|+++.++.++ .+++|..|+.+.--+ . +..
T Consensus 9 ~p~f~l~~~~G~~~~l~~~~gk-~vll~F~a~~C~~C~~~-~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~ 84 (152)
T 2lrn_A 9 APAITGIDLKGNSVSLNDFKGK-YVLVDFWFAGCSWCRKE-TPYLLKTYNAFKD--KGFTIYGVSTDRREEDWKKAIEED 84 (152)
T ss_dssp CCCCEEECSSSCEEESGGGTTS-EEEEEEECTTCTTHHHH-HHHHHHHHHHHTT--TTEEEEEEECCSCHHHHHHHHHHH
T ss_pred CCCceeEcCCCCEEeHHHcCCC-EEEEEEECCCChhHHHH-HHHHHHHHHHhcc--CCeEEEEEEccCCHHHHHHHHHHh
Confidence 6889999999998887665554 3444444 2222 2334455544333 358888888874211 1 234
Q ss_pred CeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEEEeeeecHHHHHHHHHHHhhhc
Q 025921 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSRAS 219 (246)
Q Consensus 151 ~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~iPlFF~KedL~~~l~k~~k~~ 219 (246)
++.|.++.+..... ..+.+.-| ..|+|-++ .|.++|+ ++-.+.+.+++++.|+++.+..
T Consensus 85 ~~~~~~~~d~~~~~--~~~~~~~~---v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 85 KSYWNQVLLQKDDV--KDVLESYC---IVGFPHII----LVDPEGK-IVAKELRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp TCCSEEEEECHHHH--HHHHHHTT---CCSSCEEE----EECTTSE-EEEECCCTTHHHHHHHHHHTSS
T ss_pred CCCCeEEecccchh--HHHHHHhC---CCcCCeEE----EECCCCe-EEEeeCCHHHHHHHHHHHHhhc
Confidence 56677776653221 11222111 34788643 2333443 4445678999999999998765
No 6
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=77.02 E-value=20 Score=26.91 Aligned_cols=128 Identities=13% Similarity=0.132 Sum_probs=70.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCceEEEEehhhHhhh-----hc
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML-----KV 149 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs------~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l-----k~ 149 (246)
..|-|.++|.+|..+....-.|. -+...|+. +.. ...|+++.++.++ .+++|..|+.+.--+. +.
T Consensus 13 ~~p~~~l~~~~g~~~~l~~~~gk-~vlv~f~~~~C~~C~~~-~~~l~~l~~~~~~--~~v~~v~v~~d~~~~~~~~~~~~ 88 (165)
T 3or5_A 13 PAPSFSGVTVDGKPFSSASLKGK-AYIVNFFATWCPPCRSE-IPDMVQVQKTWAS--RGFTFVGIAVNEQLPNVKNYMKT 88 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTC-EEEEEEECTTSHHHHHH-HHHHHHHHHHHTT--TTEEEEEEECSCCHHHHHHHHHH
T ss_pred CCCCceeeCCCCCEechhHcCCC-EEEEEEEcCcCHHHHHH-HHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHH
Confidence 47889999999998887666553 34444442 222 2334555554443 3588888887642211 23
Q ss_pred CCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEE--EeeeecHHHHHHHHHHHhhhc
Q 025921 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRAS 219 (246)
Q Consensus 150 ~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~--iPlFF~KedL~~~l~k~~k~~ 219 (246)
.++.|.++-+..++..+...... .+..|+|-++ .|.++|+.+ ..=+.+.+++.+.++++-++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 89 QGIIYPVMMATPELIRAFNGYID---GGITGIPTSF----VIDASGNVSGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp HTCCSCEEECCHHHHHHHHTTST---TCSCSSSEEE----EECTTSBEEEEECSCCCHHHHHHHHHHHHC--
T ss_pred cCCCCceEecCHHHHHHHhhhhc---cCCCCCCeEE----EECCCCcEEEEEcCCCCHHHHHHHHHHHHhhh
Confidence 45566666666544333221111 1345888754 222333321 111357899999999887654
No 7
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=70.85 E-value=4.3 Score=36.31 Aligned_cols=75 Identities=24% Similarity=0.282 Sum_probs=53.7
Q ss_pred cCCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhhh---
Q 025921 79 LAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK--- 148 (246)
Q Consensus 79 L~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~lk--- 148 (246)
++-+|=|++.|.+|+.+..++=.|.. |.++|. +..++..|- +.+ ..++.|..|+.|.+..++
T Consensus 1 ~ak~p~F~l~~~~G~~~~Lsd~~Gk~-vvl~F~p~~~tp~C~~e~~~~~----~~~---~~~~~v~gis~D~~~~~~~f~ 72 (322)
T 4eo3_A 1 MARVKHFELLTDEGKTFTHVDLYGKY-TILFFFPKAGTSGSTREAVEFS----REN---FEKAQVVGISRDSVEALKRFK 72 (322)
T ss_dssp -CBCCCCEEEETTSCEEEGGGTTTSE-EEEEECSSTTSHHHHHHHHHHH----HSC---CTTEEEEEEESCCHHHHHHHH
T ss_pred CCCCCCcEEECCCcCEEeHHHhCCCe-EEEEEECCCCCCCCHHHHHHHH----HHh---hCCCEEEEEeCCCHHHHHHHH
Confidence 35689999999999999988877754 555554 556665552 222 246889999998887763
Q ss_pred -cCCeeEEEecCHH
Q 025921 149 -VEGIAFRFLPDPA 161 (246)
Q Consensus 149 -~~~~~f~fVP~~~ 161 (246)
+.++.|.++-|+.
T Consensus 73 ~~~~l~fp~l~D~~ 86 (322)
T 4eo3_A 73 EKNDLKVTLLSDPE 86 (322)
T ss_dssp HHHTCCSEEEECTT
T ss_pred HhhCCceEEEEcCc
Confidence 3678888888853
No 8
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=70.20 E-value=17 Score=28.10 Aligned_cols=77 Identities=8% Similarity=0.039 Sum_probs=51.0
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEec---HHHHHHHHHHHHHhcccccCCceEEEEehhhHhhh----hcCCe-
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI- 152 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs---~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l----k~~~~- 152 (246)
.+|-|.++|.+|..+..+.-.|.. +..+|+. -.-....+..+++...++ .+++|..|+.|..-.+ ++.++
T Consensus 26 ~~P~f~l~~~~G~~~~l~~~~gk~-vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~ 103 (171)
T 2yzh_A 26 RAPEAVVVTKDLQEKIVGGAKDVV-QVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQ 103 (171)
T ss_dssp BCCCEEEEETTSCEEEESSCCSSE-EEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCC
T ss_pred cCCceEEECCCCCEeeHHHhCCCe-EEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCC
Confidence 478899999999999987766643 4444431 112344455555554555 7899999999865444 23456
Q ss_pred eEEEecC
Q 025921 153 AFRFLPD 159 (246)
Q Consensus 153 ~f~fVP~ 159 (246)
.|.++-|
T Consensus 104 ~~~~l~D 110 (171)
T 2yzh_A 104 NVTVASD 110 (171)
T ss_dssp SSEEEEC
T ss_pred CeEEeec
Confidence 6888877
No 9
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=62.90 E-value=7.4 Score=30.82 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~ 142 (246)
.+|=|+++|.+|..+..+.-+|...+..|++ ++.....+ .++.+.-.+.+.++++..|++|
T Consensus 11 ~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l-~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 11 DLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANM-AKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp CCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHH-HHHHHHHHHTTCCCEEEEEESC
T ss_pred cCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHH-HHHHHhhhcccccceeEeeecC
Confidence 4788999999999998877667544444442 33333332 2333322222446788888876
No 10
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=58.08 E-value=14 Score=28.51 Aligned_cols=77 Identities=14% Similarity=0.157 Sum_probs=49.6
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEec---HHHHHHHHHHHHHhcccccCCceEEEEehhhHhhh----hcCCe-
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI- 152 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs---~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l----k~~~~- 152 (246)
..|-|.++|.+|..+..+.-.|.. +...|+. -.--...+..+++...++ .+++|..|+.|..-.+ +..++
T Consensus 21 ~~P~f~l~~~~G~~v~l~~~~gk~-vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~ 98 (163)
T 1psq_A 21 KALDFSLTTTDLSKKSLADFDGKK-KVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLD 98 (163)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSE-EEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCT
T ss_pred CCCCEEEEcCCCcEeeHHHhCCCE-EEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCC
Confidence 478899999999998887666654 4334432 112333444455544455 6899999999865544 23456
Q ss_pred eEEEecC
Q 025921 153 AFRFLPD 159 (246)
Q Consensus 153 ~f~fVP~ 159 (246)
.|.++-|
T Consensus 99 ~~~~l~D 105 (163)
T 1psq_A 99 NAIMLSD 105 (163)
T ss_dssp TSEEEEC
T ss_pred CcEEecC
Confidence 7787777
No 11
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=56.06 E-value=50 Score=23.92 Aligned_cols=124 Identities=15% Similarity=0.129 Sum_probs=67.1
Q ss_pred CCcEEEEEcCCCCeEEEe--CCCCCeeEEEEEe------cHHHHHHHHHHHHHhc-ccccCCceEEEEehhhHh----hh
Q 025921 81 GTAVYTVSNSSNEFVLIS--DPNGAKSIGLLCF------RQEDAEAFLAQVRLRR-KELRSAAKVVPITLDQVY----ML 147 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~--~~~g~~~v~~fFf------s~eDAqa~L~qlk~~n-P~la~~~kV~~V~L~~Vy----~l 147 (246)
.+|-|.+++.+|..+..+ .-+|. -+...|+ ++.... .+.++.++. .+ .+++|..|+.+.-- +.
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~~~gk-~vll~F~~~~C~~C~~~~~-~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~~~ 85 (148)
T 3fkf_A 10 SAPYFSLPNEKGEKLSRSAERFRNR-YLLLNFWASWCDPQPEANA-ELKRLNKEYKKN--KNFAMLGISLDIDREAWETA 85 (148)
T ss_dssp BCCCCCEEBTTSCEECTTSTTTTTS-EEEEEEECGGGCCCHHHHH-HHHHHHHHTTTC--TTEEEEEEECCSCHHHHHHH
T ss_pred cCCCeEeeCCCCCEEeccccccCCc-EEEEEEECCCCHHHHHHhH-HHHHHHHHhcCC--CCeEEEEEECCCCHHHHHHH
Confidence 478899999999988776 44553 3443443 333333 445555543 32 35888888876422 11
Q ss_pred -hcCCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEEEeeeecHHHHHHHHHHHhhh
Q 025921 148 -KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSRA 218 (246)
Q Consensus 148 -k~~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~iPlFF~KedL~~~l~k~~k~ 218 (246)
+..++.|..+-+..... ..+.+. =+..|+|-++ .+.++|+ ++-.+.+.+++.+.++++-++
T Consensus 86 ~~~~~~~~~~~~d~~~~~--~~~~~~---~~v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 86 IKKDTLSWDQVCDFTGLS--SETAKQ---YAILTLPTNI----LLSPTGK-ILARDIQGEALTGKLKELLKT 147 (148)
T ss_dssp HHHTTCCSEEECCSCGGG--CHHHHH---TTCCSSSEEE----EECTTSB-EEEESCCHHHHHHHHHHHC--
T ss_pred HHHcCCCceEEEccCCcc--hHHHHh---cCCCCcCEEE----EECCCCe-EEEecCCHHHHHHHHHHHHcc
Confidence 23455666665542110 011111 1134788653 2333333 333444999999999887543
No 12
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=55.15 E-value=28 Score=26.83 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=49.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhhh----cC
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----VE 150 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~lk----~~ 150 (246)
.+|-|.++|.+|..+..+.-.|...+..||. +..+... |+++.++ + .+++|..|+.|..-.++ +.
T Consensus 22 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~-l~~~~~~---~-~~v~vv~Is~d~~~~~~~~~~~~ 96 (165)
T 1q98_A 22 IVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRK-FNQQAAK---L-SNTIVLCISADLPFAQARFCGAE 96 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHH-HHHHHHH---S-TTEEEEEEESSCHHHHTTCTTTT
T ss_pred CCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHH-HHHHHHH---c-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 4788999999999888876666543443431 3444433 3333333 3 57899999998766552 35
Q ss_pred Ce-eEEEecCH
Q 025921 151 GI-AFRFLPDP 160 (246)
Q Consensus 151 ~~-~f~fVP~~ 160 (246)
++ .|.++-|.
T Consensus 97 ~~~~~~~l~D~ 107 (165)
T 1q98_A 97 GIENAKTVSTF 107 (165)
T ss_dssp TCTTEEEEECT
T ss_pred CCCceEEeecc
Confidence 67 68888775
No 13
>2z0r_A Putative uncharacterized protein TTHA0547; alpha/beta protein, structural genomics, unknown function; 2.30A {Thermus thermophilus}
Probab=53.87 E-value=20 Score=27.63 Aligned_cols=53 Identities=23% Similarity=0.372 Sum_probs=40.8
Q ss_pred cCCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhcccccCCceEEEEe
Q 025921 79 LAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKELRSAAKVVPIT 140 (246)
Q Consensus 79 L~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~eDAqa~L~qlk~~nP~la~~~kV~~V~ 140 (246)
|++ |.|.+.+..|+.++..... .....+|.|.+.|++|+.. .|. .+.+|.+..
T Consensus 5 Ldg-~wY~L~~~~gEhl~L~~lg--~rlAliwTs~~~A~~f~~~----~p~--~Gm~V~~l~ 57 (103)
T 2z0r_A 5 LSG-TWYVLEGDPGEHLVVEALG--ERLSGIWTSRELAEAFLAH----HPH--LGMRVSALE 57 (103)
T ss_dssp CCS-CEEEEESSTTCCCEEEETT--EEEEEEBSCHHHHHHHHHT----SCS--SCCEEEEEC
T ss_pred ccC-CEEEecCCcCceeEEeccC--CceEEEEechHHHHHHHhh----CCc--cccEEeecc
Confidence 443 8999999899988886663 3588999999999999754 576 457776653
No 14
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=53.41 E-value=66 Score=23.79 Aligned_cols=123 Identities=13% Similarity=0.161 Sum_probs=68.2
Q ss_pred CCcEEEEEcCCCCeEEEe--CCCCCeeEEEEEe--------cHHHHHHHHHHHHHhc-ccccCCceEEEEehhhHh---h
Q 025921 81 GTAVYTVSNSSNEFVLIS--DPNGAKSIGLLCF--------RQEDAEAFLAQVRLRR-KELRSAAKVVPITLDQVY---M 146 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~--~~~g~~~v~~fFf--------s~eDAqa~L~qlk~~n-P~la~~~kV~~V~L~~Vy---~ 146 (246)
..|-|.++|.+|..+..+ .-.|. -+...|+ ++.... .|.++.++. .+ .++.|..|+.|.-- +
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~~~gk-~vll~F~a~~C~~v~C~~~~~-~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~ 85 (150)
T 3fw2_A 10 YAPFFSLPNAKGEKITRSSDAFKQK-SLLINFWASWNDSISQKQSNS-ELREIYKKYKKN--KYIGMLGISLDVDKQQWK 85 (150)
T ss_dssp BCCCCCEEBTTCCEECTTSTTTTTS-EEEEEEECTTCCCHHHHHHHH-HHHHHHHHHTTC--SSEEEEEEECCSCHHHHH
T ss_pred cCCccEeECCCCCEEecchhhhCCC-EEEEEEEeCCCCchHHHHHHH-HHHHHHHHhccC--CCeEEEEEEcCCCHHHHH
Confidence 478899999999988876 54554 3333333 344333 344444432 21 35889989887432 1
Q ss_pred h--hcCCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEEEeeeecHHHHHHHHHHHhh
Q 025921 147 L--KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSR 217 (246)
Q Consensus 147 l--k~~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~iPlFF~KedL~~~l~k~~k 217 (246)
- ++.++.|.++-+..... ..+.+.-| ..++|-++ .|.++|+ ++=.+.+.+++++.++++-+
T Consensus 86 ~~~~~~~~~~~~~~d~~~~~--~~~~~~~~---v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 86 DAIKRDTLDWEQVCDFGGLN--SEVAKQYS---IYKIPANI----LLSSDGK-ILAKNLRGEELKKKIENIVE 148 (150)
T ss_dssp HHHHHTTCCSEEECCSCGGG--CHHHHHTT---CCSSSEEE----EECTTSB-EEEESCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEEcCcccc--hHHHHHcC---CCccCeEE----EECCCCE-EEEccCCHHHHHHHHHHHHh
Confidence 1 33566777776652110 01111111 24777553 3333333 33345599999999988765
No 15
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=50.80 E-value=23 Score=27.33 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=48.7
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-c--HHHHHHHHHHHHHhcccccCCceEEEEehhhHhhhh----cCCe-
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-R--QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----VEGI- 152 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-s--~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~lk----~~~~- 152 (246)
..|=|.++|.+|..+..+.-.|.. +..+|+ . -.--...+..+++...+ .++.|..|+.|....++ +.++
T Consensus 25 ~aP~f~l~~~~G~~~~l~~~~Gk~-vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~ 101 (166)
T 3p7x_A 25 FAPDFTVLDNDLNQVTLADYAGKK-KLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLD 101 (166)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSC-EEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCS
T ss_pred CCCCeEEEcCCCCEEeHHHhCCCc-EEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 478899999999998887656643 444444 1 11122223333333333 57899999998766552 3466
Q ss_pred eEEEecCH
Q 025921 153 AFRFLPDP 160 (246)
Q Consensus 153 ~f~fVP~~ 160 (246)
.|.++-|.
T Consensus 102 ~~~~l~D~ 109 (166)
T 3p7x_A 102 NVITLSDH 109 (166)
T ss_dssp SCEEEECT
T ss_pred ceEEccCC
Confidence 68888776
No 16
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=50.29 E-value=31 Score=27.98 Aligned_cols=75 Identities=20% Similarity=0.167 Sum_probs=51.5
Q ss_pred CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhhh----
Q 025921 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK---- 148 (246)
Q Consensus 80 ~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~lk---- 148 (246)
..+|=|.++|.+|..+..+.-.|.. +..+|+ +..+... |+++.+ ++ .++.|..|+.|....++
T Consensus 56 ~~aPdf~l~d~~G~~v~L~d~~Gk~-vvl~F~~~~~c~~C~~e~~~-l~~l~~---~~-~~v~vv~Is~D~~~~~~~~~~ 129 (200)
T 3zrd_A 56 DKAKDFTLVAKDLSDVALSSFAGKR-KVLNIFPSIDTGVCAASVRK-FNQLAG---EL-ENTVVLCISSDLPFAQSRFCG 129 (200)
T ss_dssp CBCCCCEEECTTSCEEEGGGGTTSE-EEEEECSCCCCSCCCHHHHH-HHHHHH---TS-TTEEEEEEESSCHHHHTTCTT
T ss_pred CCCCCeEEECCCCCEEcHHHhCCCc-EEEEEECCCCCchhHHHHHH-HHHHHH---Hh-CCCEEEEEECCCHHHHHHHHH
Confidence 3578899999999998887766644 444443 3444433 344444 33 57999999999777663
Q ss_pred cCCe-eEEEecCH
Q 025921 149 VEGI-AFRFLPDP 160 (246)
Q Consensus 149 ~~~~-~f~fVP~~ 160 (246)
..++ .|.++-|.
T Consensus 130 ~~~~~~f~~l~D~ 142 (200)
T 3zrd_A 130 AEGLSNVITLSTL 142 (200)
T ss_dssp TTTCTTEEEEETT
T ss_pred HcCCCCceEEecC
Confidence 3578 89999886
No 17
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=48.85 E-value=31 Score=26.34 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=49.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhh----hc
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KV 149 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l----k~ 149 (246)
..|-|.++|.+|..+..+.-.|...+...|+ ++..... |.++.++..+ .+++|..|+.|..-.+ ++
T Consensus 7 ~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~-l~~~~~~~~~--~~v~vv~vs~d~~~~~~~~~~~ 83 (161)
T 3drn_A 7 KAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASA-FRDNWDLLKD--YDVVVIGVSSDDINSHKRFKEK 83 (161)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHH-HHHTHHHHHT--TCEEEEEEESCCHHHHHHHHHH
T ss_pred cCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHH-HHHHHHHHHH--cCCEEEEEeCCCHHHHHHHHHH
Confidence 4788999999999988876666432555555 3444433 3333333222 3589999999865554 23
Q ss_pred CCeeEEEecCH
Q 025921 150 EGIAFRFLPDP 160 (246)
Q Consensus 150 ~~~~f~fVP~~ 160 (246)
.++.|.++.+.
T Consensus 84 ~~~~~~~~~d~ 94 (161)
T 3drn_A 84 YKLPFILVSDP 94 (161)
T ss_dssp TTCCSEEEECT
T ss_pred hCCCceEEECC
Confidence 56778888773
No 18
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=44.00 E-value=98 Score=23.11 Aligned_cols=56 Identities=13% Similarity=0.203 Sum_probs=36.9
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~ 142 (246)
.+|-|.++|.+|..+..+.-+|. -+...|+ ++.. ...|.++.++.+ +++|..|+.+
T Consensus 16 ~~p~~~l~~~~g~~~~l~~~~gk-~~lv~F~~~~C~~C~~~-~~~l~~l~~~~~----~v~vv~i~~d 77 (165)
T 3ha9_A 16 REASFSLTTIDGEVISLNNVGGD-VVILWFMAAWCPSCVYM-ADLLDRLTEKYR----EISVIAIDFW 77 (165)
T ss_dssp HHHCCCEEBTTSCEECGGGCCSS-EEEEEEECTTCTTHHHH-HHHHHHHHHHCT----TEEEEEEECC
T ss_pred cCCCCEeecCCCCEeeHHHhCCC-EEEEEEECCCCcchhhh-HHHHHHHHHHcC----CcEEEEEEec
Confidence 46889999999998887666654 3444444 2332 345556666544 6888888887
No 19
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=41.93 E-value=1.2e+02 Score=23.41 Aligned_cols=134 Identities=13% Similarity=0.061 Sum_probs=69.2
Q ss_pred CCc-EEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCceEEEEehhh---Hhhh---
Q 025921 81 GTA-VYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQ---VYML--- 147 (246)
Q Consensus 81 ~VP-VF~Vtn~~g~plli~~~~g~~~v~~fFfs------~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~---Vy~l--- 147 (246)
.+| -|.++|.+|..+..+.-.|...+..|+.+ ..+.. .|+++.++..+.+.+++|..|++|- .-.+
T Consensus 6 ~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~-~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~ 84 (170)
T 3me7_A 6 YVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITK-SLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRF 84 (170)
T ss_dssp BCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHH-HHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHH
T ss_pred cCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHH-HHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHH
Confidence 478 89999999999887665564333333322 22222 2333333322224568999999873 1111
Q ss_pred -hc---CCeeEEE--ecCHHHHHHHHHHHhhcc--C-CCCCCCcEEeecceEEEeCCe---EEEeeeecHHHHHHHHHHH
Q 025921 148 -KV---EGIAFRF--LPDPAQIRNALELKAADV--R-TGFDGVPVFQSELLVVKKKNK---RYCPVYFQKEDIEKELSKV 215 (246)
Q Consensus 148 -k~---~~~~f~f--VP~~~qVe~A~~L~~~~g--q-~~f~GVPVF~~~~Lti~~~~~---~~iPlFF~KedL~~~l~k~ 215 (246)
+. +...|.| ..+..++....+-..-.. . ..+...|.++ .|.++|+ .+...-++.+++.+.|+++
T Consensus 85 ~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 85 QKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVV----VLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEE----EECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEE----EECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 11 2234444 467666655433211000 0 0122334222 2333332 1234456789999999998
Q ss_pred hhhc
Q 025921 216 SRAS 219 (246)
Q Consensus 216 ~k~~ 219 (246)
.+..
T Consensus 161 ~~~~ 164 (170)
T 3me7_A 161 RGEG 164 (170)
T ss_dssp TTCS
T ss_pred hccc
Confidence 8755
No 20
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=39.43 E-value=1.3e+02 Score=23.05 Aligned_cols=126 Identities=10% Similarity=0.075 Sum_probs=62.9
Q ss_pred CCCcEEEEEcC--CCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccc----cCCceEEEEehhh--Hh
Q 025921 80 AGTAVYTVSNS--SNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKEL----RSAAKVVPITLDQ--VY 145 (246)
Q Consensus 80 ~~VPVF~Vtn~--~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~l----a~~~kV~~V~L~~--Vy 145 (246)
..+|=|.+++- +|..+..+.-.|. -+...|+ ++.... .|+++.++..+. ..+++|..|+.+. .-
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk-~vlv~F~a~~C~~C~~~~~-~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~ 112 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQ-VVILNAWGQWCAPCRSESD-DLQIIHEELQAAGNGDTPGGTVLGINVRDYSRD 112 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTS-EEEEEEECTTCHHHHHHHH-HHHHHHHHHHHCC---CCSEEEEEEECSCCCHH
T ss_pred CCCCceeccccccCCcEecHHHhCCC-EEEEEEECCcCHhHHHHHH-HHHHHHHHHHhcCCCccCCcEEEEEECCCCCHH
Confidence 46899999999 9999888766664 3443443 222222 334444433321 1123888888765 21
Q ss_pred hh----hcCCeeEEEecCHHHHHHHHHHHhhccCCCCCCCc-EEeecceEEEeCCeEE--EeeeecHHHHHHHHHHHhh
Q 025921 146 ML----KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVP-VFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSR 217 (246)
Q Consensus 146 ~l----k~~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVP-VF~~~~Lti~~~~~~~--iPlFF~KedL~~~l~k~~k 217 (246)
.+ +..++.|.++-+.. ..+...-|.-...++| +|+ |.++|+.+ ..=..+.++|.+.++++.+
T Consensus 113 ~~~~~~~~~~~~~~~~~d~~-----~~~~~~~~~~~v~~~P~~~l-----id~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 113 IAQDFVTDNGLDYPSIYDPP-----FMTAASLGGVPASVIPTTIV-----LDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp HHHHHHHHTTCCSCEEECTT-----CGGGGGTTTCCTTCCSEEEE-----ECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccEEECCc-----chHHHHhccCCCCCCCeEEE-----ECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 11 22344444443331 1111111111235788 333 22222211 1112478999999988765
No 21
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=39.36 E-value=26 Score=27.59 Aligned_cols=76 Identities=17% Similarity=0.295 Sum_probs=48.3
Q ss_pred CCcEEEEE-cCCCCeEEEeCC-CCCeeEEEEEe-------cHH-HHHHHHHHHHHhcccccCCc-eEEEEehhhHhhh--
Q 025921 81 GTAVYTVS-NSSNEFVLISDP-NGAKSIGLLCF-------RQE-DAEAFLAQVRLRRKELRSAA-KVVPITLDQVYML-- 147 (246)
Q Consensus 81 ~VPVF~Vt-n~~g~plli~~~-~g~~~v~~fFf-------s~e-DAqa~L~qlk~~nP~la~~~-kV~~V~L~~Vy~l-- 147 (246)
..|-|.+. |.+|..+..+.- .|.. +..+|+ +.. ++..+.+..++- . ..++ +|..|+.|....+
T Consensus 8 ~aP~f~l~~~~~G~~v~L~d~~~Gk~-vvl~f~~a~wcp~C~~~e~p~l~~~~~~~-~--~~gv~~vv~Is~d~~~~~~~ 83 (167)
T 2wfc_A 8 KLPAVTVFGATPNDKVNMAELFAGKK-GVLFAVPGAFTPGSSKTHLPGYVEQAAAI-H--GKGVDIIACMAVNDSFVMDA 83 (167)
T ss_dssp BCCCCEEESSSTTCEEEHHHHTTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHH-H--HTTCCEEEEEESSCHHHHHH
T ss_pred cCCCcEeecCCCCcEEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHH-H--HCCCCEEEEEeCCCHHHHHH
Confidence 47889999 999998887664 5544 444544 344 554443322221 1 1468 9999999877655
Q ss_pred --hcCCee--EEEecCH
Q 025921 148 --KVEGIA--FRFLPDP 160 (246)
Q Consensus 148 --k~~~~~--f~fVP~~ 160 (246)
++.++. |.++-|.
T Consensus 84 ~~~~~~~~~~fp~l~D~ 100 (167)
T 2wfc_A 84 WGKAHGADDKVQMLADP 100 (167)
T ss_dssp HHHHTTCTTTSEEEECT
T ss_pred HHHhcCCCcceEEEECC
Confidence 234565 8888874
No 22
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=39.01 E-value=25 Score=26.82 Aligned_cols=78 Identities=21% Similarity=0.164 Sum_probs=47.3
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecH--HHHHHHHHHHHHhcccccCCceEEEEehhhHhhh----hcCCe-e
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ--EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI-A 153 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~--eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l----k~~~~-~ 153 (246)
.+|-|.++|.+|..+..+.-.|...+..||-+- .-..+.+..+++-..++ .+++|..|+.|..-.+ +..++ .
T Consensus 23 ~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~ 101 (167)
T 2jsy_A 23 QAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDK 101 (167)
T ss_dssp CCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTT
T ss_pred cCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCC
Confidence 478899999999988876555543333333221 23333344443333334 5799999999865444 23456 7
Q ss_pred EEEecC
Q 025921 154 FRFLPD 159 (246)
Q Consensus 154 f~fVP~ 159 (246)
|.++-+
T Consensus 102 ~~~~~d 107 (167)
T 2jsy_A 102 VETLSD 107 (167)
T ss_dssp EEEEEG
T ss_pred ceEeeC
Confidence 777776
No 23
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=38.15 E-value=61 Score=24.19 Aligned_cols=78 Identities=21% Similarity=0.314 Sum_probs=48.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe----cHHHHHHHHHHHHHhccccc-CCceEEEEehhhHhhh----hcCC
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF----RQEDAEAFLAQVRLRRKELR-SAAKVVPITLDQVYML----KVEG 151 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf----s~eDAqa~L~qlk~~nP~la-~~~kV~~V~L~~Vy~l----k~~~ 151 (246)
.+|-|.++|.+|..+..+.-.|.+-+...|+ +. .-...+..+++-..++. .+++|..|+.|..-.+ +..+
T Consensus 14 ~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~-~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 92 (160)
T 1xvw_A 14 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTG-ICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSG 92 (160)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSS-HHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCC-chHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcC
Confidence 4788999999999888776666523444554 21 23444444444433443 4688999998765444 2245
Q ss_pred eeEEEecC
Q 025921 152 IAFRFLPD 159 (246)
Q Consensus 152 ~~f~fVP~ 159 (246)
+.|.++-+
T Consensus 93 ~~~~~~~d 100 (160)
T 1xvw_A 93 FTFPLLSD 100 (160)
T ss_dssp CCSCEEEC
T ss_pred CCceEEec
Confidence 66667666
No 24
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=37.80 E-value=72 Score=23.41 Aligned_cols=123 Identities=13% Similarity=0.205 Sum_probs=62.3
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhH--hhh----hc
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQV--YML----KV 149 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~-----eDAqa~L~qlk~~nP~la~~~kV~~V~L~~V--y~l----k~ 149 (246)
.+|-|.++|.+|..+....-.|. -+...|+.. ......|.++.++.++ .+++|..|+.+.- -.+ +.
T Consensus 7 ~~p~~~l~~~~g~~~~l~~~~gk-~vll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~ 83 (154)
T 3kcm_A 7 PAPDFTLNTLNGEVVKLSDLKGQ-VVIVNFWATWCPPCREEIPSMMRLNAAMAG--KPFRMLCVSIDEGGKVAVEEFFRK 83 (154)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-EEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEEECCTTHHHHHHHHHHH
T ss_pred CCCCeEEEcCCCCEEehhhcCCC-EEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEEcCCcchHHHHHHHHH
Confidence 47889999999998887665554 344444421 1223345555554443 3688888887652 111 12
Q ss_pred CCeeEEEecCHHHHHHHHHHHhhccCCCCCCCc-EEeecceEEEeCCeEE----EeeeecHHHHHHHHHHHhhhc
Q 025921 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVP-VFQSELLVVKKKNKRY----CPVYFQKEDIEKELSKVSRAS 219 (246)
Q Consensus 150 ~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVP-VF~~~~Lti~~~~~~~----iPlFF~KedL~~~l~k~~k~~ 219 (246)
.++.|.++-+... +.+..+ | ..|+| +|+ |.++|+.+ -..-++.+++.+.|+++....
T Consensus 84 ~~~~~~~~~d~~~-~~~~~~----~---v~~~P~~~l-----id~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 84 TGFTLPVLLDADK-RVGKLY----G---TTGVPETFV-----IDRHGVILKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp HCCCCCEEECTTC-HHHHHH----T---CCSBCEEEE-----ECTTSBEEEEEESCCCTTSHHHHHHHHTC----
T ss_pred cCCCeeEEecCch-HHHHHh----C---CCCCCeEEE-----ECCCCcEEEEEcCCCccccHHHHHHHHHHHHHh
Confidence 2344444443321 011111 1 34788 333 22222211 111247789999999887766
No 25
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=36.10 E-value=60 Score=25.19 Aligned_cols=128 Identities=13% Similarity=0.112 Sum_probs=67.0
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhhh----cC
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----VE 150 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~lk----~~ 150 (246)
.+|-|.++|.+|..+..+.-.|...+..||- ++.+.. .|+++.++ .+++|..|+.|....++ ..
T Consensus 23 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~-~l~~l~~~-----~~v~vv~Is~D~~~~~~~~~~~~ 96 (175)
T 1xvq_A 23 PAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVR-TFDERAAA-----SGATVLCVSKDLPFAQKRFCGAE 96 (175)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHH-HHHHHHHH-----TTCEEEEEESSCHHHHTTCC---
T ss_pred cCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHH-HHHHHHhh-----cCCEEEEEECCCHHHHHHHHHHc
Confidence 4788999999999888766555433333331 233333 33444433 46899999998766552 24
Q ss_pred Ce-eEEEecCHH-HHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEEEeee-----ecHHHHHHHHHHHhhhc
Q 025921 151 GI-AFRFLPDPA-QIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVY-----FQKEDIEKELSKVSRAS 219 (246)
Q Consensus 151 ~~-~f~fVP~~~-qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~iPlF-----F~KedL~~~l~k~~k~~ 219 (246)
++ .|.++.|.. ++..+..+... .....|.+ .-..+.|.++|+ ++=.+ -+.+++++.++.+.+..
T Consensus 97 ~~~~~~~l~D~~~~~~~~~gv~~~--~~~~~g~~--~p~~~lid~~G~-I~~~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 97 GTENVMPASAFRDSFGEDYGVTIA--DGPMAGLL--ARAIVVIGADGN-VAYTELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp ---CEEEEECTTSSHHHHTTCBBC--SSTTTTSB--CSEEEEECTTSB-EEEEEECSBTTCCCCHHHHHHHHHHTC
T ss_pred CCCCceEeeCCHHHHHHHhCCccc--ccccCCcc--cceEEEECCCCe-EEEEEECCCcCCCCCHHHHHHHHHhhc
Confidence 56 688888753 22222211110 01112321 112333444444 22222 35668899998888765
No 26
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=35.36 E-value=75 Score=23.24 Aligned_cols=122 Identities=17% Similarity=0.228 Sum_probs=63.8
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhh-----hc
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML-----KV 149 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l-----k~ 149 (246)
.+|-|.+++ +|..+....-.|. -+..+|+ ++.. ...|+++.++.++ .+++|..|+.+.--+. +.
T Consensus 8 ~~P~f~l~~-~g~~~~l~~~~gk-~vll~f~~~~C~~C~~~-~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~ 82 (152)
T 3gl3_A 8 KAPDFALPG-KTGVVKLSDKTGS-VVYLDFWASWCGPCRQS-FPWMNQMQAKYKA--KGFQVVAVNLDAKTGDAMKFLAQ 82 (152)
T ss_dssp BCCCCEEEB-SSSEEEGGGGTTS-EEEEEEECTTCTHHHHH-HHHHHHHHHHHGG--GTEEEEEEECCSSHHHHHHHHHH
T ss_pred cCCceEeeC-CCCeEeHHHhCCC-EEEEEEECCcCHHHHHH-HHHHHHHHHHhhc--CCeEEEEEECCCCHHHHHHHHHH
Confidence 478899999 8988877666554 3444444 2222 3335555554443 3488888887642211 22
Q ss_pred CCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEE---Ee-eeecHHHHHHHHHHHhhhc
Q 025921 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY---CP-VYFQKEDIEKELSKVSRAS 219 (246)
Q Consensus 150 ~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~---iP-lFF~KedL~~~l~k~~k~~ 219 (246)
.++.|.++-+... .+.+. -+..|+|-++ .|.++|+.+ .. .-.+.++|++.+++.....
T Consensus 83 ~~~~~~~~~d~~~-----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 83 VPAEFTVAFDPKG-----QTPRL---YGVKGMPTSF----LIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SCCCSEEEECTTC-----HHHHH---TTCCSSSEEE----EECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred cCCCCceeECCcc-----hhHHH---cCCCCCCeEE----EECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 3455555554321 11111 1134788643 222222211 11 1135688999888887665
No 27
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=34.36 E-value=13 Score=28.73 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=47.0
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhh----hc
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KV 149 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l----k~ 149 (246)
..|=|++.|.+|+.+..+.-.|.. +...|+ +..+...+.+...+ .. ..++.|..|+.|....+ ++
T Consensus 9 ~aPdF~l~~~~G~~~~l~d~~Gk~-vvl~f~~~~~c~~C~~e~~~l~~~~~~-~~--~~~~~~v~vs~d~~~~~~~~~~~ 84 (157)
T 4g2e_A 9 LAPDFELPDTELKKVKLSALKGKV-VVLAFYPAAFTQVCTKEMCTFRDSMAK-FN--QVNAVVLGISVDPPFSNKAFKEH 84 (157)
T ss_dssp BCCCCEEEBTTSCEEEGGGGTTSC-EEEEECSCTTCCC------CCSCGGGG-GG--GCSSEEEEEESSCHHHHHHHHHH
T ss_pred CCcCeEeECCCCCEEeHHHHCCCe-EEEEecCCCCCCccccchhhccccccc-cc--ccCceEeeecccchhHHHHHHHH
Confidence 478899999999998887766644 444444 23433333222222 11 24688999999877766 34
Q ss_pred CCeeEEEecCHH
Q 025921 150 EGIAFRFLPDPA 161 (246)
Q Consensus 150 ~~~~f~fVP~~~ 161 (246)
.++.|.++-|..
T Consensus 85 ~~~~~p~l~D~~ 96 (157)
T 4g2e_A 85 NKLNFTILSDYN 96 (157)
T ss_dssp TTCCSEEEECTT
T ss_pred cCCcEEEEEcCC
Confidence 678888887753
No 28
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=33.33 E-value=27 Score=26.19 Aligned_cols=131 Identities=13% Similarity=0.044 Sum_probs=65.3
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccc--cCCceEEEEehhhHh----hh--
Q 025921 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKEL--RSAAKVVPITLDQVY----ML-- 147 (246)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~l--a~~~kV~~V~L~~Vy----~l-- 147 (246)
.|-|.++|.+|..+..+.-.|...+..||. ++.... .|+++.++..+. ..+++|..|+.|.-. .+
T Consensus 3 ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~-~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~ 81 (164)
T 2ggt_A 3 GGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELE-KMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIAN 81 (164)
T ss_dssp CCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHH-HHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHH
T ss_pred CCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHH-HHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHH
Confidence 477999999999988776566433333332 333332 233333322210 136889999887521 12
Q ss_pred --hcCCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEe----------e-cceEEEeCCeEE--EeeeecHHHHHHHH
Q 025921 148 --KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQ----------S-ELLVVKKKNKRY--CPVYFQKEDIEKEL 212 (246)
Q Consensus 148 --k~~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~----------~-~~Lti~~~~~~~--iPlFF~KedL~~~l 212 (246)
+..+..|.++....+ ....+.+.-| ..++|.-- . ..+.|.++|+.+ ..-..+.++|.+.+
T Consensus 82 ~~~~~~~~~~~l~~~~d--~~~~~~~~~~---v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 156 (164)
T 2ggt_A 82 YVKEFSPKLVGLTGTRE--EVDQVARAYR---VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASI 156 (164)
T ss_dssp HHHTTCSSCEEEECCHH--HHHHHHHTTT---CCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHH
T ss_pred HHHHcCCCeEEEeCCHH--HHHHHHHhcC---eEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHH
Confidence 234566777754322 1122222111 22455211 0 122233333322 12235778888888
Q ss_pred HHHhhh
Q 025921 213 SKVSRA 218 (246)
Q Consensus 213 ~k~~k~ 218 (246)
+++.++
T Consensus 157 ~~ll~~ 162 (164)
T 2ggt_A 157 ATHMRP 162 (164)
T ss_dssp HHHHGG
T ss_pred HHHHHh
Confidence 887653
No 29
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=32.67 E-value=1.2e+02 Score=22.25 Aligned_cols=122 Identities=14% Similarity=0.049 Sum_probs=67.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCceEEEEeh---hhHhhh----
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITL---DQVYML---- 147 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs------~eDAqa~L~qlk~~nP~la~~~kV~~V~L---~~Vy~l---- 147 (246)
.+|-|.+++.+|..+....-. +-+...|+. +.. ...|.++.++. +++|..|++ +..-.+
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~--k~vll~f~~~~C~~C~~~-~~~l~~l~~~~-----~v~~v~v~~d~~~~~~~~~~~~ 81 (154)
T 3ia1_A 10 PLPDFLLLDPKGQPVTPATVS--KPAVIVFWASWCTVCKAE-FPGLHRVAEET-----GVPFYVISREPRDTREVVLEYM 81 (154)
T ss_dssp ECCCCCEECTTSCEECTTTSC--SSEEEEEECTTCHHHHHH-HHHHHHHHHHH-----CCCEEEEECCTTCCHHHHHHHH
T ss_pred cCCceEEECCCCCEechHHcC--CeEEEEEEcccChhHHHH-HHHHHHHHHHc-----CCeEEEEeCCCcccHHHHHHHH
Confidence 378889999999887765543 334444442 222 23344444433 688888888 222222
Q ss_pred hcCCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEE--EeeeecHHHHHHHHHHHhhhc
Q 025921 148 KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRAS 219 (246)
Q Consensus 148 k~~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~--iPlFF~KedL~~~l~k~~k~~ 219 (246)
+..++.|.++-+... ....+.+.-| ..++|-++ .|.++|+.+ ..=+.+.++|.+.|++..+..
T Consensus 82 ~~~~~~~~~~~d~~~--~~~~~~~~~~---v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 82 KTYPRFIPLLASDRD--RPHEVAARFK---VLGQPWTF----VVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp TTCTTEEECBCCSSC--CHHHHHTTSS---BCSSCEEE----EECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred HHcCCCccccccccc--chHHHHHHhC---CCcccEEE----EECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 335678887776211 0112221111 24788633 222333311 122468999999999988766
No 30
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=32.64 E-value=58 Score=25.97 Aligned_cols=77 Identities=13% Similarity=-0.010 Sum_probs=43.1
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcc-cccCCceEEEEehhh----Hhhh---
Q 025921 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRK-ELRSAAKVVPITLDQ----VYML--- 147 (246)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP-~la~~~kV~~V~L~~----Vy~l--- 147 (246)
.|-|.++|.+|..+..+.-.|...+..|+. ++.+... |+++.++-. +.+.+++|..|+.|. .-.+
T Consensus 21 ~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~-l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~ 99 (200)
T 2b7k_A 21 GGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDK-LGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEY 99 (200)
T ss_dssp CCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHH-HHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHH
T ss_pred CCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHH-HHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHH
Confidence 488999999999988776566433333332 3333332 233222111 123478999999883 2222
Q ss_pred -hcCCeeEEEecC
Q 025921 148 -KVEGIAFRFLPD 159 (246)
Q Consensus 148 -k~~~~~f~fVP~ 159 (246)
+..+..|.+++.
T Consensus 100 ~~~~~~~~~~l~~ 112 (200)
T 2b7k_A 100 LSDFHPSILGLTG 112 (200)
T ss_dssp HTTSCTTCEEEEC
T ss_pred HHHcCCCceEEeC
Confidence 233556777765
No 31
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=31.88 E-value=63 Score=22.49 Aligned_cols=40 Identities=5% Similarity=0.116 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhccc
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKE 129 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~eDAqa~L~qlk~~nP~ 129 (246)
|=--|-+..++|+.++ +. -.|-++.+|++-++.+|++-|+
T Consensus 11 G~frfrLka~NGevI~-sS--------e~Y~sk~~a~~gI~sVk~na~~ 50 (64)
T 3bid_A 11 GEYRWRLKAANHEIIA-QG--------EGYTSKQNCQHAVDLLKSTTAA 50 (64)
T ss_dssp SCEEEEEECTTSCEEE-EC--------CCBSCHHHHHHHHHHHHTCCTT
T ss_pred CCEEEEEEeCCCCEEE-EC--------CCcCCHHHHHHHHHHHHHhCCC
Confidence 3344555555555555 22 2588999999999999997664
No 32
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=31.41 E-value=25 Score=25.71 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=33.8
Q ss_pred HHHhhc-----CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHH
Q 025921 74 FVSKTL-----AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVR 124 (246)
Q Consensus 74 eI~ekL-----~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~eDAqa~L~qlk 124 (246)
++.+++ .++|.+++-|.+|..+..... |. ....-+++.++.+++|++++
T Consensus 79 ~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g-~~-~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 79 ELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKG-GE-LANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHHHHTTCGGGGCSSEEEEECTTSCEEEECCS-CT-TTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHhCCccCCccceEEEECCCCCEEEEecC-Cc-ccccccCCHHHHHHHHHHhc
Confidence 556655 579999999999987765332 11 11123678899999998875
No 33
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=30.66 E-value=92 Score=24.06 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~ 142 (246)
.+|=|.++|.+|..+..+.-.|. -+...|. ++.+... |+++.++..+ .++.|..|+.+
T Consensus 17 ~~p~f~l~d~~G~~v~l~~~~Gk-~vlv~F~atwC~~C~~~~p~-l~~l~~~~~~--~~~~vi~is~d 80 (180)
T 3kij_A 17 SFYAFEVKDAKGRTVSLEKYKGK-VSLVVNVASDCQLTDRNYLG-LKELHKEFGP--SHFSVLAFPCN 80 (180)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTS-EEEEEEECSSSTTHHHHHHH-HHHHHHHHTT--TSEEEEEEECC
T ss_pred cccceEEecCCCCEecHHHcCCC-EEEEEEEecCCCCcHHHHHH-HHHHHHHhcc--CCeEEEEEECC
Confidence 57889999999998888766664 3333333 4444433 4455544332 35788888754
No 34
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=30.05 E-value=44 Score=25.26 Aligned_cols=61 Identities=13% Similarity=0.223 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~ 142 (246)
.+|-|.++|.+|..+..+.-.|...+..||- ++... ..|.++.++..+.+.+++|..|+.|
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~-~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 12 EVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMT-AHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp ECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHH-HHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred ccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHH-HHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 3788999999999888766555433333332 22222 2344444433332235899999986
No 35
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=29.70 E-value=51 Score=26.28 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=48.1
Q ss_pred CCcEEEEE-cCCCCeEEEeC-CCCCeeEEEEEe-------cH-HHHHHHHHHHHHhcccccCCceEEE-EehhhHhhhh-
Q 025921 81 GTAVYTVS-NSSNEFVLISD-PNGAKSIGLLCF-------RQ-EDAEAFLAQVRLRRKELRSAAKVVP-ITLDQVYMLK- 148 (246)
Q Consensus 81 ~VPVF~Vt-n~~g~plli~~-~~g~~~v~~fFf-------s~-eDAqa~L~qlk~~nP~la~~~kV~~-V~L~~Vy~lk- 148 (246)
..|-|++. +.+|+.+..+. -.|.. +.++|+ +. +++-.+.+...+- . ..++.|.. |+.|....++
T Consensus 20 ~aPdf~l~~~~~g~~v~L~d~~~gk~-vvL~f~pa~wcp~C~~~e~p~l~~~~~~~-~--~~gv~vv~~iS~D~~~~~~~ 95 (173)
T 3mng_A 20 AIPAVEVFEGEPGNKVNLAELFKGKK-GVLFGVPGAFTPGCSKTHLPGFVEQAEAL-K--AKGVQVVACLSVNDAFVTGE 95 (173)
T ss_dssp BCCCCEEECSSTTCEEEHHHHTTTSE-EEEEECSCTTCHHHHHTHHHHHHHTHHHH-H--TTTCCEEEEEESSCHHHHHH
T ss_pred CCCCeEeeeCCCCCEEEhHHHhCCCc-EEEEEEeCCCCCCCCHHHHHHHHHHHHHH-H--hCCCEEEEEEcCCCHHHHHH
Confidence 36788888 88898888766 35543 444444 45 4555544333221 1 14688885 9999877663
Q ss_pred ---cCCee--EEEecCHH
Q 025921 149 ---VEGIA--FRFLPDPA 161 (246)
Q Consensus 149 ---~~~~~--f~fVP~~~ 161 (246)
+.++. |.++-|..
T Consensus 96 f~~~~~~~~~fp~l~D~~ 113 (173)
T 3mng_A 96 WGRAHKAEGKVRLLADPT 113 (173)
T ss_dssp HHHHTTCTTTCEEEECTT
T ss_pred HHHHhCCCCceEEEECCC
Confidence 34555 88998864
No 36
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=29.03 E-value=51 Score=24.83 Aligned_cols=59 Identities=19% Similarity=0.129 Sum_probs=34.6
Q ss_pred cEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhccc--ccCCceEEEEehh
Q 025921 83 AVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKE--LRSAAKVVPITLD 142 (246)
Q Consensus 83 PVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~--la~~~kV~~V~L~ 142 (246)
|-|.++|.+|..+..+.-.|...+..||. ++.... .|+++.++..+ ...+++|..|+.|
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~-~l~~l~~~~~~~~~~~~v~vv~is~d 73 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELE-KLVQVVRQLEAEPGLPPVQPVFITVD 73 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHH-HHHHHHHHHHHSTTSCCEEEEEEESC
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHH-HHHHHHHHHhhccCCCceEEEEEEEC
Confidence 77899999999988876666433333321 333332 33333333221 1246889999887
No 37
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=28.22 E-value=69 Score=23.43 Aligned_cols=123 Identities=11% Similarity=0.156 Sum_probs=64.2
Q ss_pred CCc-EEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHh----hh-h
Q 025921 81 GTA-VYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVY----ML-K 148 (246)
Q Consensus 81 ~VP-VF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy----~l-k 148 (246)
.+| -|.+++.+|..+....-.|. -+...|+ ++.. ...++++.++.++ .+++|..|+.+.-- +. +
T Consensus 8 ~~p~~f~l~~~~g~~~~l~~~~gk-~~lv~f~~~~C~~C~~~-~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~ 83 (152)
T 2lja_A 8 PSAASFSYPDINGKTVSLADLKGK-YIYIDVWATWCGPCRGE-LPALKELEEKYAG--KDIHFVSLSCDKNKKAWENMVT 83 (152)
T ss_dssp CCSSSCEEEETTTEEEESTTTTTS-EEEEEECCSSCCGGGGT-HHHHHHHHHHSTT--SSEEEEEEECCSCHHHHHHHHH
T ss_pred CCCcccEeecCCCCEeeHHHcCCC-EEEEEEECCcCHhHHHH-hHHHHHHHHHhcc--CCeEEEEEEccCcHHHHHHHHH
Confidence 367 88999999988877665553 3444444 2332 3345566655443 45788888765421 11 1
Q ss_pred cCCee-EEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEEE--eeeecHHHHHHHHHHHhhhc
Q 025921 149 VEGIA-FRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYC--PVYFQKEDIEKELSKVSRAS 219 (246)
Q Consensus 149 ~~~~~-f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~i--PlFF~KedL~~~l~k~~k~~ 219 (246)
..++. +.+.-+.. - .+.+. =+..|+|-++ .+.++|+.+- .=+.+.++|.+.|+++....
T Consensus 84 ~~~~~~~~~~~d~~-~----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 84 KDQLKGIQLHMGTD-R----TFMDA---YLINGIPRFI----LLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp HHTCCSEEEECSSC-T----HHHHH---TTCCSSCCEE----EECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred hcCCCCceeecCcc-h----hHHHH---cCcCCCCEEE----EECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 11111 22222220 0 11111 1134788654 2222222111 11468899999999998876
No 38
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=27.78 E-value=1.6e+02 Score=20.81 Aligned_cols=59 Identities=17% Similarity=0.186 Sum_probs=38.4
Q ss_pred CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCceEEEEehhh
Q 025921 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQ 143 (246)
Q Consensus 80 ~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs------~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~ 143 (246)
...|-|.+++.+|..+.... +|. -+...|+. +. ....|+++.++.++ .+++|..|+.+.
T Consensus 13 ~~~p~~~l~~~~g~~~~l~~-~gk-~~ll~f~~~~C~~C~~-~~~~l~~~~~~~~~--~~~~~v~v~~d~ 77 (145)
T 3erw_A 13 AVPAVFLMKTIEGEDISIPN-KGQ-KTILHFWTSWCPPCKK-ELPQFQSFYDAHPS--DSVKLVTVNLVN 77 (145)
T ss_dssp CSCCEEEEECTTSCEEEESC-TTS-EEEEEEECSSCHHHHH-HHHHHHHHHHHCCC--SSEEEEEEECGG
T ss_pred CcCCCceeecCCCCEEeHHH-CCC-EEEEEEECCCCHHHHH-HHHHHHHHHHHcCC--CCEEEEEEEccC
Confidence 35899999999999998877 554 34444442 22 23345555555443 468888887764
No 39
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=26.56 E-value=26 Score=26.57 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=45.6
Q ss_pred CCcEEE--EEcCCCCeEEEeCCCCCeeEEEEEec---HHHHHHHHHHHHHhccccc-CCceEEEEehhhHhhh----hcC
Q 025921 81 GTAVYT--VSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELR-SAAKVVPITLDQVYML----KVE 150 (246)
Q Consensus 81 ~VPVF~--Vtn~~g~plli~~~~g~~~v~~fFfs---~eDAqa~L~qlk~~nP~la-~~~kV~~V~L~~Vy~l----k~~ 150 (246)
.+|-|. ++|.+|..+..+.-.|. -+..+|+. -..-...+..+++...++. .+++|..|+.|..-.+ ++.
T Consensus 12 ~~P~f~~~l~~~~G~~~~l~~~~gk-~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 90 (163)
T 3gkn_A 12 PAATFDLPLSLSGGTQTTLRAHAGH-WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQ 90 (163)
T ss_dssp CGGGGGCCEECSTTCEECSGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred cCCCccccccCCCCCEEEHHHhCCC-cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHh
Confidence 477888 99999998887665564 34444442 1122222333322222221 4689999999855544 234
Q ss_pred CeeEEEecCH
Q 025921 151 GIAFRFLPDP 160 (246)
Q Consensus 151 ~~~f~fVP~~ 160 (246)
++.|.++-|.
T Consensus 91 ~~~~~~~~d~ 100 (163)
T 3gkn_A 91 GFAFPLVSDG 100 (163)
T ss_dssp CCSSCEEECT
T ss_pred CCCceEEECC
Confidence 6667777663
No 40
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=26.00 E-value=1.4e+02 Score=22.10 Aligned_cols=78 Identities=13% Similarity=0.193 Sum_probs=48.2
Q ss_pred CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhHhhh--hcCCe
Q 025921 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML--KVEGI 152 (246)
Q Consensus 80 ~~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~-----eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l--k~~~~ 152 (246)
..+|-|.+++.+|..+..+.-.|. -+...|+.. ......|+++.++.++ .++.|..|+.+.-++- +..++
T Consensus 19 ~~~p~f~l~~~~g~~~~l~~~~gk-~vll~F~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~ 95 (158)
T 3hdc_A 19 ALAPNFKLPTLSGENKSLAQYRGK-IVLVNFWASWCPYCRDEMPSMDRLVKSFPK--GDLVVLAVNVEKRFPEKYRRAPV 95 (158)
T ss_dssp SBCCCCEEECTTSCEEESGGGTTS-EEEEEEECTTCHHHHHHHHHHHHHHHHSST--TSEEEEEEECSSSCCGGGGGCCC
T ss_pred CcCCCceeEcCCCCEEehHHhCCC-EEEEEEECCcCHHHHHHHHHHHHHHHHccc--CCeEEEEEeCCHHHHHHHHHcCC
Confidence 357889999999998887766554 344444421 1223345555555443 5688999988873322 33456
Q ss_pred eEEEecCH
Q 025921 153 AFRFLPDP 160 (246)
Q Consensus 153 ~f~fVP~~ 160 (246)
.|.++-+.
T Consensus 96 ~~~~~~d~ 103 (158)
T 3hdc_A 96 SFNFLSDA 103 (158)
T ss_dssp SCEEEECT
T ss_pred CceEEECc
Confidence 67766654
No 41
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=25.89 E-value=1e+02 Score=21.83 Aligned_cols=118 Identities=13% Similarity=0.101 Sum_probs=61.3
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhh----Hhhh-hcC
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQ----VYML-KVE 150 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~-----eDAqa~L~qlk~~nP~la~~~kV~~V~L~~----Vy~l-k~~ 150 (246)
..|-|.++|.+|..+....-+|. .+...|+.. ......++++.++.+ ++++..|+.+. +-+. +..
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~~k-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 3 ERLQFTATTLSGAPFDGASLQGK-PAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTTS-CEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCeEeecCCCCeecHHHhCCC-EEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHc
Confidence 46889999999998887665553 344444432 122334455555443 68888888754 1111 123
Q ss_pred CeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEE-Ee---eeecHHHHHHHHHHH
Q 025921 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY-CP---VYFQKEDIEKELSKV 215 (246)
Q Consensus 151 ~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~-iP---lFF~KedL~~~l~k~ 215 (246)
++.|.++-+... +.++. -+..|+|-++ .+.++|+.+ .. =+.+.+++.+.++++
T Consensus 78 ~~~~~~~~d~~~-~~~~~-------~~i~~~P~~~----lid~~G~i~~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 78 NLNFTNLNDADG-VIWAR-------YNVPWQPAFV----FYRADGTSTFVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp TCCSEEEECTTS-HHHHH-------TTCCSSSEEE----EECTTSCEEEECCSSSCCCHHHHHHHHHHC
T ss_pred CCCceEEECCch-hHHHh-------cCCCCCCEEE----EECCCCcEEEEEcCCCccCHHHHHHHHHHH
Confidence 344444443211 11111 1135788654 222333322 11 134688888888765
No 42
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=25.21 E-value=47 Score=28.29 Aligned_cols=126 Identities=11% Similarity=0.138 Sum_probs=71.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cH-----HHHHHHHHHHHHhcccccCCceEEEEehhhHhhhh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK 148 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-------s~-----eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~lk 148 (246)
..|-|++.|.+|..+..+.-.|.. +..+|+ +. .++. .+.+. . .++.|..|+.|....++
T Consensus 27 ~APdFtL~d~~G~~vsLsd~~Gk~-vVL~F~ps~~cp~C~~~~~~~El~----~~~~~---~-~gv~VvgIS~Ds~~~~~ 97 (224)
T 3keb_A 27 YLPSFMLVDDQKHDAALESFSHTP-KLIVTLLSVDEDEHAGLLLLRETR----RFLDS---W-PHLKLIVITVDSPSSLA 97 (224)
T ss_dssp BCCCCEEEETTSCEEEGGGGTTCC-EEEEECSCTTCSTTTSHHHHHHHH----HHHTT---C-TTSEEEEEESSCHHHHH
T ss_pred CCCCeEEECCCCCEEeHHHhCCCc-EEEEEEeCCCCCCCCCCccHHHHH----HHHHH---c-CCCEEEEEECCCHHHHH
Confidence 478999999999988877655643 444444 22 3333 33332 2 57899999999887773
Q ss_pred ----cCCe-eEEEecCH--HHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeE----EEeee---ecHHHHHHHHHH
Q 025921 149 ----VEGI-AFRFLPDP--AQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKR----YCPVY---FQKEDIEKELSK 214 (246)
Q Consensus 149 ----~~~~-~f~fVP~~--~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~----~iPlF---F~KedL~~~l~k 214 (246)
+.++ .|.++-|. .++..+..+.... ..+.|++. -....|.++|+- +.+-. -+.+++.++|+.
T Consensus 98 ~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~--~~~~G~~~--p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~ 173 (224)
T 3keb_A 98 RARHEHGLPNIALLSTLRGRDFHKRYGVLITE--YPLSGYTS--PAIILADAANVVHYSERLANTRDFFDFDAIEKLLQE 173 (224)
T ss_dssp HHHHHHCCTTCEEEESTTCTTHHHHTTCBCCS--TTSTTCBC--CEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred HHHHHcCCCCceEEEcCCchHHHHHhCCcccc--ccccCCcc--CEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 3466 69999986 3444444333211 11234210 112223223221 11222 246888888888
Q ss_pred Hhhhc
Q 025921 215 VSRAS 219 (246)
Q Consensus 215 ~~k~~ 219 (246)
+.++.
T Consensus 174 l~~~~ 178 (224)
T 3keb_A 174 GEQQA 178 (224)
T ss_dssp HHHHC
T ss_pred hhhcc
Confidence 87764
No 43
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=24.55 E-value=1.4e+02 Score=21.85 Aligned_cols=122 Identities=12% Similarity=0.212 Sum_probs=62.2
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCceEEEEehhhH----hhh-hcC
Q 025921 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQV----YML-KVE 150 (246)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs------~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~V----y~l-k~~ 150 (246)
+|-|.++|.+|..+..+.-.|. -+...|+. +. ....|.++.++.++ .+++|..|+.+.- -+. +..
T Consensus 6 ~p~~~l~~~~g~~~~l~~~~gk-~vlv~F~~~~C~~C~~-~~~~l~~~~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~ 81 (151)
T 2f9s_A 6 APNFVLEDTNGKRIELSDLKGK-GVFLNFWGTWCEPCKK-EFPYMANQYKHFKS--QGVEIVAVNVGESKIAVHNFMKSY 81 (151)
T ss_dssp CCCCEEECTTCCEEEGGGGTTS-EEEEEEECTTCHHHHH-HHHHHHHHHHHHGG--GTEEEEEEEESCCHHHHHHHHHHH
T ss_pred CCcceeEcCCCCEEEHHHcCCC-EEEEEEECCCCHHHHH-HHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHHc
Confidence 6889999999998887665554 34444442 22 22334444443332 3578888877531 111 122
Q ss_pred CeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEE--EeeeecHHHHHHHHHHHhhhc
Q 025921 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRAS 219 (246)
Q Consensus 151 ~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~--iPlFF~KedL~~~l~k~~k~~ 219 (246)
++.|.++-+... .+.+. -+..|+|-++ .+.++|+.+ ..=+.+.++|.+.++++.+..
T Consensus 82 ~~~~~~~~d~~~-----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 82 GVNFPVVLDTDR-----QVLDA---YDVSPLPTTF----LINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp TCCSCEEEETTS-----HHHHH---TTCCSSCEEE----EECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCCceEEECCch-----HHHHh---cCCCCCCeEE----EECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 333444333210 11111 1135788643 122222211 111348999999999987654
No 44
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=24.23 E-value=1.7e+02 Score=21.39 Aligned_cols=48 Identities=10% Similarity=0.057 Sum_probs=32.4
Q ss_pred HHHHhhcC----CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhccc
Q 025921 73 DFVSKTLA----GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKE 129 (246)
Q Consensus 73 ~eI~ekL~----~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~eDAqa~L~qlk~~nP~ 129 (246)
.++.+++. ++|.+.|.|.+|..+-.. .|. .+.++..++|+++++.++.
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~--~g~-------~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTI--TGE-------VNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEEC--CSC-------CCHHHHHHHHHHHHTC---
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEE--CCC-------CCHHHHHHHHHHHHHHhhc
Confidence 34555554 899999999998765542 222 3678889999999887654
No 45
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=24.07 E-value=1.4e+02 Score=23.13 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~ 142 (246)
.+|=|.++|.+|..+..+.-.|.. +...|. ++.+.. .|+++.++..+ .+++|..|+.+
T Consensus 28 ~~p~f~l~~~~G~~~~l~~~~Gk~-vlv~F~atwC~~C~~~~p-~l~~l~~~~~~--~~v~vv~vs~d 91 (181)
T 2p31_A 28 DFYDFKAVNIRGKLVSLEKYRGSV-SLVVNVASECGFTDQHYR-ALQQLQRDLGP--HHFNVLAFPCN 91 (181)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTSE-EEEEEECSSSTTHHHHHH-HHHHHHHHHGG--GTEEEEEEECC
T ss_pred ccCceEeecCCCCEecHHHcCCCE-EEEEEeccCCCCcHHHHH-HHHHHHHHhhc--CCEEEEEEECc
Confidence 478889999999988876655643 333333 344433 34444444332 35788888765
No 46
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=24.00 E-value=1.4e+02 Score=21.51 Aligned_cols=121 Identities=10% Similarity=0.004 Sum_probs=61.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHH---HHHhcccccCCceEEEEehhhHh----hh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQ---VRLRRKELRSAAKVVPITLDQVY----ML 147 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~q---lk~~nP~la~~~kV~~V~L~~Vy----~l 147 (246)
..|-|.++|.+|..+..+.-.|. -+...|. ++..... |.+ +.+...+ .+++|..|+++.-- +.
T Consensus 6 ~~p~f~l~~~~g~~~~l~~~~gk-~vll~F~a~~C~~C~~~~~~-l~~~~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~ 81 (142)
T 3ewl_A 6 KAADFTYVTVHGDNSRMSRLKAQ-YTMLFFYDPDCSNCRKFEKL-FAEIPAFVEMVEN--GTLRVLAIYPDENREEWATK 81 (142)
T ss_dssp BCCCCEEECTTCCEEEGGGCCCS-EEEEEECCSSCHHHHHHHHH-HHTCHHHHHHHHH--TSEEEEEEECSSCHHHHHHH
T ss_pred cCCCCEEECCCCCEEEhhhcCCC-EEEEEEECCCCccHHHHHHH-HHHhHHHHHHhcc--CCeEEEEEEecCCHHHHHHH
Confidence 47889999999999888776664 3443443 2333222 222 3332222 35888888876311 11
Q ss_pred -hcCCeeEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEEEeeeecHHHHHHHHHHHh
Q 025921 148 -KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVS 216 (246)
Q Consensus 148 -k~~~~~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~iPlFF~KedL~~~l~k~~ 216 (246)
+..++.|.++-+...--. . . ..=+..|+|-++ .|.++|+ ++--..+.++|++.+++..
T Consensus 82 ~~~~~~~~~~~~d~~~~~~-~--~---~~~~v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 82 AVYMPQGWIVGWNKAGDIR-T--R---QLYDIRATPTIY----LLDGRKR-VILKDTSMEQLIDYLATQA 140 (142)
T ss_dssp HTTSCTTCEEEECTTCHHH-H--T---TCSCCCSSSEEE----EECTTCB-EEECSCCHHHHHHHHHC--
T ss_pred HHHcCCCcceeeCCccchh-h--H---HHcCCCCCCeEE----EECCCCC-EEecCCCHHHHHHHHHHHc
Confidence 234555555554432110 0 0 011134788543 2222222 2223467889988887654
No 47
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=22.91 E-value=1.4e+02 Score=22.13 Aligned_cols=58 Identities=10% Similarity=0.122 Sum_probs=35.7
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~ 142 (246)
.+|=|.++|.+|..+..+.-.|.. +...|. ++.+.. .|+++.++..+ .+++|..|+.+
T Consensus 10 ~~p~f~l~~~~G~~~~l~~~~gk~-vlv~f~a~~C~~C~~~~~-~l~~l~~~~~~--~~~~vv~v~~d 73 (169)
T 2v1m_A 10 SIYEFTVKDINGVDVSLEKYRGHV-CLIVNVACKCGATDKNYR-QLQEMHTRLVG--KGLRILAFPCN 73 (169)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTSE-EEEEEECSSSTTHHHHHH-HHHHHHHHHGG--GTEEEEEEECC
T ss_pred ccccceeecCCCCCccHHHcCCCE-EEEEEeeccCCchHHHHH-HHHHHHHHhhc--CCeEEEEEECC
Confidence 478899999999988877656643 333333 333333 34444443332 35888888875
No 48
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=22.08 E-value=26 Score=27.61 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=45.6
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhh----hcC
Q 025921 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVE 150 (246)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~l----k~~ 150 (246)
+|=|.++|.+|..+..+.-.|. -+..+|+ +..+... |+++.++.. ..++.|..|+.|....+ ++.
T Consensus 31 aP~f~l~~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~-l~~l~~~~~--~~~~~vv~Vs~D~~~~~~~~~~~~ 106 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLE-FNLLLPQFE--QINATVLGVSRDSVKSHDSFCAKQ 106 (179)
T ss_dssp HHHCCEEEGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHH-HHHHHHHHH--TTTEEEEEEESCCHHHHHHHHHHH
T ss_pred CCCeeEECCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHH-HHHHHHHHH--HCCCEEEEEcCCCHHHHHHHHHHc
Confidence 5778888889988877665564 3444554 3333332 233333222 24688999999876555 234
Q ss_pred CeeEEEecCH
Q 025921 151 GIAFRFLPDP 160 (246)
Q Consensus 151 ~~~f~fVP~~ 160 (246)
++.|.++-|.
T Consensus 107 ~~~f~~l~D~ 116 (179)
T 3ixr_A 107 GFTFPLVSDS 116 (179)
T ss_dssp TCCSCEEECT
T ss_pred CCceEEEECC
Confidence 6777777764
No 49
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=22.03 E-value=1.3e+02 Score=21.81 Aligned_cols=60 Identities=17% Similarity=0.001 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHH---HHHhcccccCCceEEEEehhhH
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQ---VRLRRKELRSAAKVVPITLDQV 144 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~q---lk~~nP~la~~~kV~~V~L~~V 144 (246)
..|-|.+++.+|..+..+.-.| +-+...|. ++.+... |.+ +.++..+ .++.|..|+.+.-
T Consensus 10 ~ap~f~l~~~~g~~~~l~~~~g-k~vll~F~a~wC~~C~~~~~~-l~~~~~l~~~~~~--~~~~vi~i~~d~~ 78 (142)
T 3eur_A 10 KALNFTYTLDSGVKGTLYQFPA-EYTLLFINNPGCHACAEMIEG-LKASPVINGFTAA--KKLKVLSIYPDEE 78 (142)
T ss_dssp BCCCCEEEETTSCEEETTTCCC-SEEEEEECCSSSHHHHHHHHH-HHHCHHHHHHHHT--TSEEEEEEECSSC
T ss_pred ccCCcEEEcCCCCEeeHHHcCC-CEEEEEEECCCCccHHHHHHH-HhhhHHHHHHhcc--CCeEEEEEEcCCC
Confidence 4788999999999888766556 43444443 2333332 333 3333222 4688888888654
No 50
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=21.55 E-value=1.7e+02 Score=22.32 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=36.6
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehhh
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQ 143 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFf------s~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~ 143 (246)
.+|-|.++|.+|..+..+.-.|.. +...|. ++.... .|+++.++..+ .+++|..|+.+.
T Consensus 39 ~~p~f~l~~~~G~~~~l~~~~gk~-vll~F~a~~C~~C~~~~~-~l~~l~~~~~~--~~~~vv~v~~d~ 103 (186)
T 1jfu_A 39 KLPDLAFEDADGKPKKLSDFRGKT-LLVNLWATWCVPCRKEMP-ALDELQGKLSG--PNFEVVAINIDT 103 (186)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSE-EEEEEECTTCHHHHHHHH-HHHHHHHHHCB--TTEEEEEEECCC
T ss_pred cCCCcEeEcCCCCEeeHHHcCCCE-EEEEEEeCCCHhHHHHHH-HHHHHHHHhcc--CCcEEEEEECCC
Confidence 478899999999988876655543 433443 233322 23444443332 568899998874
No 51
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=20.90 E-value=86 Score=23.44 Aligned_cols=77 Identities=12% Similarity=0.025 Sum_probs=43.4
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhccccc-CCceEEEEehhhH----hhh--
Q 025921 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELR-SAAKVVPITLDQV----YML-- 147 (246)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fFf-------s~eDAqa~L~qlk~~nP~la-~~~kV~~V~L~~V----y~l-- 147 (246)
.|-|.++|.+| .+..+.-.|.. +...|. ++... ..|+++.++..+.+ .+++|..|++|.- -.+
T Consensus 16 ~p~f~l~~~~g-~~~l~~~~gk~-vll~f~~~~C~~~C~~~~-~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 92 (172)
T 2k6v_A 16 PVDFALEGPQG-PVRLSQFQDKV-VLLFFGFTRCPDVCPTTL-LALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADR 92 (172)
T ss_dssp ECCCEEECSSS-EEEGGGSTTSE-EEEEEECTTCSSHHHHHH-HHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHH
T ss_pred CCCeEEEcCCC-CCcHHHhCCCE-EEEEEECCCCcchhHHHH-HHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHH
Confidence 57789999999 87776655543 333332 23322 23344444333211 3688999997632 111
Q ss_pred --hcCCeeEEEecCHH
Q 025921 148 --KVEGIAFRFLPDPA 161 (246)
Q Consensus 148 --k~~~~~f~fVP~~~ 161 (246)
++.+..|.++.+..
T Consensus 93 ~~~~~~~~~~~l~d~~ 108 (172)
T 2k6v_A 93 YAKAFHPSFLGLSGSP 108 (172)
T ss_dssp HHHHHCTTEEEECCCH
T ss_pred HHHHhCCCcEEEeCCH
Confidence 23456788888765
No 52
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.82 E-value=3.4e+02 Score=22.87 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=0.0
Q ss_pred EEEEEecHHHHHHHHHHHHHhcccccCCceEEEEehhhHhhhhc-------CCeeEEEecCHHHHHHHHHHHhhccCCCC
Q 025921 106 IGLLCFRQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLKV-------EGIAFRFLPDPAQIRNALELKAADVRTGF 178 (246)
Q Consensus 106 v~~fFfs~eDAqa~L~qlk~~nP~la~~~kV~~V~L~~Vy~lk~-------~~~~f~fVP~~~qVe~A~~L~~~~gq~~f 178 (246)
|..+-++-.|--..|.+.++ .+-||..|.-+.+..--. -++.+..+=+.++++.+.+-+++.|.+
T Consensus 85 VV~I~vs~~Dil~aL~~a~~------~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~-- 156 (225)
T 2pju_A 85 VILIKPSGYDVLQFLAKAGK------LTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTE-- 156 (225)
T ss_dssp EEEECCCHHHHHHHHHHTTC------TTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCC--
T ss_pred EEEecCCHHHHHHHHHHHHh------hCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCC--
Q ss_pred CCCcEEeecceEE---EeCCeEEEeeeecHHHHHHHHHHHhh
Q 025921 179 DGVPVFQSELLVV---KKKNKRYCPVYFQKEDIEKELSKVSR 217 (246)
Q Consensus 179 ~GVPVF~~~~Lti---~~~~~~~iPlFF~KedL~~~l~k~~k 217 (246)
++..+.++. ++-|-..+.++ ++|-+..+++++.+
T Consensus 157 ----vVVG~~~~~~~A~~~Gl~~vlI~-s~eSI~~Ai~eA~~ 193 (225)
T 2pju_A 157 ----AVVGAGLITDLAEEAGMTGIFIY-SAATVRQAFSDALD 193 (225)
T ss_dssp ----EEEESHHHHHHHHHTTSEEEESS-CHHHHHHHHHHHHH
T ss_pred ----EEECCHHHHHHHHHcCCcEEEEC-CHHHHHHHHHHHHH
No 53
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=20.42 E-value=2e+02 Score=19.93 Aligned_cols=120 Identities=10% Similarity=0.116 Sum_probs=61.0
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhH----hhh-hcC
Q 025921 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQV----YML-KVE 150 (246)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fFfs~-----eDAqa~L~qlk~~nP~la~~~kV~~V~L~~V----y~l-k~~ 150 (246)
.+|-|.+++.+|..+....-.|. .+...|++. ......++++.++.+ ++++..|+.+.- -+. +..
T Consensus 4 ~~p~~~~~~~~g~~~~l~~~~~k-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~ 78 (136)
T 1zzo_A 4 AQLQFSAKTLDGHDFHGESLLGK-PAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKY 78 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTTS-CEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHT
T ss_pred CCCCcccccCCCCEeeHHHhCCC-eEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHc
Confidence 36889999999998887665553 344444422 122334455555433 688888887531 111 112
Q ss_pred Ce-eEEEecCHHHHHHHHHHHhhccCCCCCCCcEEeecceEEEeCCeEE-EeeeecHHHHHHHHHHHhh
Q 025921 151 GI-AFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY-CPVYFQKEDIEKELSKVSR 217 (246)
Q Consensus 151 ~~-~f~fVP~~~qVe~A~~L~~~~gq~~f~GVPVF~~~~Lti~~~~~~~-iPlFF~KedL~~~l~k~~k 217 (246)
++ .|.++-+... .+.+. -+..|+|-++ .+.++|+.+ ..=+.+.+++.+.++++-+
T Consensus 79 ~~~~~~~~~d~~~-----~~~~~---~~i~~~P~~~----~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 79 PVKTFTQLADTDG-----SVWAN---FGVTQQPAYA----FVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp TCTTSEEEECTTC-----HHHHH---TTCCSSSEEE----EECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred CCCceEEEEcCCc-----HHHHH---cCCCCCceEE----EECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 33 3333333210 11111 1135788654 222233321 2223578899988887643
Done!