BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025925
         (246 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1
           PE=2 SV=2
          Length = 255

 Score = 35.0 bits (79), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 30/62 (48%)

Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 198
           + G+ +W VG+ I   +D    + +   E   K    G ++Y    NYFGE+  W G  +
Sbjct: 148 LTGFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSSANYFGELVEWCGFAL 207

Query: 199 AS 200
           AS
Sbjct: 208 AS 209


>sp|O74507|YJD4_SCHPO Uncharacterized protein C594.04c OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPCC594.04c PE=3 SV=2
          Length = 344

 Score = 34.7 bits (78), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 31/175 (17%)

Query: 62  RQVVLTFLAVVWGLRLAL-FLLMRILNWG-EDRRFDEMRSNLGK-----LAIFWI--FQA 112
           R +++ FL  +W  RL   +      N G ED R+  +R  + K        F+I  FQ 
Sbjct: 108 RLMIMAFLQTLWSARLTYNYYRKGGYNRGAEDYRWVRVRQIMPKWIYPLFHYFYIHIFQV 167

Query: 113 VWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENR--- 169
           + ++ ++ P  +   +  + +  A D I   ++     +E +ADQQ+  +  +  +    
Sbjct: 168 LHLYLLASPTYIAMLAGNERAFGAWDWIALELFMFMFVLEMLADQQQWDYYEARNHYNVD 227

Query: 170 --------------GKWCN-VGFWKYSRHPNYFGEIFLWWGIF----VASTPVLD 205
                         G+  N  G +++SRHPN+  E  +W   +    +AS  +L+
Sbjct: 228 KTVPPRFKYDLLSLGRGFNATGLFRWSRHPNFLAEQLIWLSFYLFGAIASESLLN 282


>sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus
           GN=Srd5a1 PE=1 SV=2
          Length = 259

 Score = 34.7 bits (78), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 141 GWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVAS 200
           G+ +W VG+ I   +D    + +   E   K    G ++Y    NYFGE+  W G  +AS
Sbjct: 154 GFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSAANYFGELVEWCGFALAS 213


>sp|Q9LDR4|ERG24_ARATH Delta(14)-sterol reductase OS=Arabidopsis thaliana GN=FK PE=1 SV=2
          Length = 369

 Score = 33.5 bits (75), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 10/64 (15%)

Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENR----------GKWCNVGFWKYSRHPNYFG 188
           V+  +++ +G  +   A++QK  FK +P+            GK    G+W  +RH NY G
Sbjct: 245 VVNCLVFLIGYMVFRGANKQKHIFKKNPKTPIWGKPPVVVGGKLLVSGYWGIARHCNYLG 304

Query: 189 EIFL 192
           ++ L
Sbjct: 305 DLML 308


>sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis
           GN=SRD5A1 PE=1 SV=1
          Length = 263

 Score = 32.3 bits (72), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 30/62 (48%)

Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 198
           +IG+ +W  G+ I   +D    + +   +   K    G ++Y    NYFGEI  W G  +
Sbjct: 156 LIGFGLWLAGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYAL 215

Query: 199 AS 200
           AS
Sbjct: 216 AS 217


>sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1
           PE=1 SV=1
          Length = 259

 Score = 32.3 bits (72), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 30/62 (48%)

Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 198
           +IG+ +W  G+ I   +D    + +   +   K    G ++Y    NYFGEI  W G  +
Sbjct: 152 LIGFGLWLTGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYAL 211

Query: 199 AS 200
           AS
Sbjct: 212 AS 213


>sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos taurus GN=SRD5A1
           PE=2 SV=1
          Length = 257

 Score = 31.6 bits (70), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 29/62 (46%)

Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 198
           + G  +W +G+ I   +D    + +   E   K    G ++Y    NYFGE+  W G  +
Sbjct: 150 LTGSALWLIGMLINIHSDHVLRNLRKPGETGYKIPRGGLFEYISAANYFGEVVEWCGYAL 209

Query: 199 AS 200
           AS
Sbjct: 210 AS 211


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.330    0.143    0.477 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,396,768
Number of Sequences: 539616
Number of extensions: 3546828
Number of successful extensions: 8852
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 8835
Number of HSP's gapped (non-prelim): 37
length of query: 246
length of database: 191,569,459
effective HSP length: 114
effective length of query: 132
effective length of database: 130,053,235
effective search space: 17167027020
effective search space used: 17167027020
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 60 (27.7 bits)