BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025926
(246 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255587521|ref|XP_002534300.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
communis]
gi|223525544|gb|EEF28082.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
communis]
Length = 278
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/243 (73%), Positives = 205/243 (84%), Gaps = 10/243 (4%)
Query: 1 MWLMKCPALVSRSLKI-PSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WLMKCPALVS SLK PSS D+D +RP+AKVILSI+PL SN+D+SS +FTM
Sbjct: 40 VWLMKCPALVSNSLKKNPSSP--DNDPSRPIAKVILSINPLNSNDDNSSR------QFTM 91
Query: 60 ELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGK 119
EL ESGNAPK YSMDMS+D IPM V +ES+ GK+SVEGKI KFDMRPH EN+ENY K
Sbjct: 92 ELAGNESGNAPKSYSMDMSEDFIPMFVLSESAQGKVSVEGKILYKFDMRPHTENLENYAK 151
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRG 179
+CRERT KYMTK RQIQ+IDNDNGSHMRPMP +MI++G +KKKP K ++VKRTRRDRG
Sbjct: 152 MCRERTKKYMTKGRQIQIIDNDNGSHMRPMP-LMIASGSNDKKKPPAKATDVKRTRRDRG 210
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
EME IMFKLFERQ NWTLRQLIQETDQPEQFLKD+LK+LCVYNNKG+NQGSYELKPEYK+
Sbjct: 211 EMEAIMFKLFERQPNWTLRQLIQETDQPEQFLKDILKELCVYNNKGTNQGSYELKPEYKR 270
Query: 240 AAD 242
+ +
Sbjct: 271 STE 273
>gi|225449108|ref|XP_002274802.1| PREDICTED: general transcription factor IIF subunit 2 [Vitis
vinifera]
Length = 257
Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 174/242 (71%), Positives = 207/242 (85%), Gaps = 9/242 (3%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +VSRS S + DS RPVAKVI+S+DPL +N+D S +FTME
Sbjct: 20 VWLMKCPPVVSRS----LSSSSASDSLRPVAKVIVSLDPLLANDDDDSPP-----QFTME 70
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
L TESGNAPK YSMDMS+D IPM+VF+ESS G+ +VEGKI NKFDM+PH+EN++NYGKL
Sbjct: 71 LAGTESGNAPKCYSMDMSQDFIPMAVFSESSQGRTAVEGKILNKFDMKPHNENIQNYGKL 130
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGE 180
CRERT+KYMTKSRQIQVIDNDNGSHMRPMPGM+I++ ++KKK KGS++KRTRRDRGE
Sbjct: 131 CRERTSKYMTKSRQIQVIDNDNGSHMRPMPGMVIASAVSDKKKMPTKGSDMKRTRRDRGE 190
Query: 181 MEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
ME+I+FKLFERQ NWTLRQLIQETDQPEQFLKD+LKDLCVYNNKG+NQG+YELKPEYK++
Sbjct: 191 MEEILFKLFERQPNWTLRQLIQETDQPEQFLKDLLKDLCVYNNKGTNQGTYELKPEYKRS 250
Query: 241 AD 242
+
Sbjct: 251 GE 252
>gi|296086049|emb|CBI31490.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/242 (71%), Positives = 207/242 (85%), Gaps = 9/242 (3%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +VSRS S + DS RPVAKVI+S+DPL +N+D S +FTME
Sbjct: 63 VWLMKCPPVVSRS----LSSSSASDSLRPVAKVIVSLDPLLANDDDDSPP-----QFTME 113
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
L TESGNAPK YSMDMS+D IPM+VF+ESS G+ +VEGKI NKFDM+PH+EN++NYGKL
Sbjct: 114 LAGTESGNAPKCYSMDMSQDFIPMAVFSESSQGETAVEGKILNKFDMKPHNENIQNYGKL 173
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGE 180
CRERT+KYMTKSRQIQVIDNDNGSHMRPMPGM+I++ ++KKK KGS++KRTRRDRGE
Sbjct: 174 CRERTSKYMTKSRQIQVIDNDNGSHMRPMPGMVIASAVSDKKKMPTKGSDMKRTRRDRGE 233
Query: 181 MEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
ME+I+FKLFERQ NWTLRQLIQETDQPEQFLKD+LKDLCVYNNKG+NQG+YELKPEYK++
Sbjct: 234 MEEILFKLFERQPNWTLRQLIQETDQPEQFLKDLLKDLCVYNNKGTNQGTYELKPEYKRS 293
Query: 241 AD 242
+
Sbjct: 294 GE 295
>gi|356511855|ref|XP_003524637.1| PREDICTED: general transcription factor IIF subunit 2-like [Glycine
max]
Length = 252
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 201/244 (82%), Gaps = 13/244 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP LVSRSL+ P SD +RPVAKV++SIDPL SN+D S +FTME
Sbjct: 20 VWLMKCPPLVSRSLRAPPSD-----PSRPVAKVVVSIDPLNSNDDDSPP------QFTME 68
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
L TE+G+ P+ Y MDMSKD IPMSVF+++ GKISVEGKI NKFDMRPH++ +E YGKL
Sbjct: 69 LAGTEAGHIPRCYVMDMSKDFIPMSVFSDTPQGKISVEGKILNKFDMRPHNQTLELYGKL 128
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM--ISTGFTEKKKPQPKGSEVKRTRRDR 178
CRERTNKYM KSRQIQVIDND+G+HMRPMPGM+ ++G +EKKK K ++ KRTRRDR
Sbjct: 129 CRERTNKYMVKSRQIQVIDNDSGAHMRPMPGMISFSTSGPSEKKKSPAKATDTKRTRRDR 188
Query: 179 GEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
GEME+I+FKLFERQ NW+LR LIQETDQPEQFLKD+LKDLCVYNNKG+NQG+YELKPEY+
Sbjct: 189 GEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDILKDLCVYNNKGTNQGTYELKPEYR 248
Query: 239 KAAD 242
K+ D
Sbjct: 249 KSGD 252
>gi|297819938|ref|XP_002877852.1| hypothetical protein ARALYDRAFT_348323 [Arabidopsis lyrata subsp.
lyrata]
gi|297323690|gb|EFH54111.1| hypothetical protein ARALYDRAFT_348323 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 164/242 (67%), Positives = 192/242 (79%), Gaps = 13/242 (5%)
Query: 1 MWLMKCPALVSRSLK-IPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
M LMK P+LV+ SL+ +P D D RP AKVIL++D L + T+F M
Sbjct: 27 MLLMKAPSLVASSLQSLPFPD----DPYRPDAKVILNVDLL--------APEDEETKFVM 74
Query: 60 ELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGK 119
EL ESGN P+RY++DMSKD IPM+VF ESS+GK+SVEGKIKNKFDMRPH+EN+E+YG+
Sbjct: 75 ELARAESGNMPRRYTLDMSKDFIPMNVFCESSDGKMSVEGKIKNKFDMRPHNENIESYGR 134
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRG 179
LCRERTNKYM K+RQIQVIDN G HMRPMPGM+I T EKKK + SE+KRTRRDR
Sbjct: 135 LCRERTNKYMGKNRQIQVIDNARGMHMRPMPGMIIPTAAPEKKKLTNRTSEMKRTRRDRR 194
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
EME++MF LFERQSNWTLR LIQETDQPEQFLKD+L+DLC+YNNKGSNQG+YELKPEYKK
Sbjct: 195 EMEEVMFNLFERQSNWTLRLLIQETDQPEQFLKDLLRDLCIYNNKGSNQGTYELKPEYKK 254
Query: 240 AA 241
A
Sbjct: 255 AT 256
>gi|334185929|ref|NP_190795.3| Transcription initiation factor IIF, beta subunit [Arabidopsis
thaliana]
gi|332645403|gb|AEE78924.1| Transcription initiation factor IIF, beta subunit [Arabidopsis
thaliana]
Length = 269
Score = 328 bits (842), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 194/244 (79%), Gaps = 11/244 (4%)
Query: 1 MWLMKCPALVSRSLKIPS---SDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRF 57
M LMK P+LV+ SL+ S DD RP AKVIL +DPL ++ED T+F
Sbjct: 32 MLLMKAPSLVASSLQSHSFPDDPYRPDDPYRPDAKVILGVDPL-AHEDEG-------TQF 83
Query: 58 TMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENY 117
MEL +SGN P+RY++DMSKD IPM+VF ESS+GK+SVEGKIKNKFDMRPH+EN+E+Y
Sbjct: 84 VMELARADSGNMPRRYTLDMSKDFIPMNVFCESSDGKMSVEGKIKNKFDMRPHNENIESY 143
Query: 118 GKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRD 177
G+LCRERTNKYM K+RQIQVIDN G HMRPMPGM+I T EKKK + SE+KRTRRD
Sbjct: 144 GRLCRERTNKYMGKNRQIQVIDNARGMHMRPMPGMIIPTAAPEKKKLTNRTSEMKRTRRD 203
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
R EME++MF LFERQSNWTLR LIQETDQPEQFLKD+LKDLC+YNNKGSNQG+YELKPEY
Sbjct: 204 RREMEEVMFNLFERQSNWTLRLLIQETDQPEQFLKDLLKDLCIYNNKGSNQGTYELKPEY 263
Query: 238 KKAA 241
KKA
Sbjct: 264 KKAT 267
>gi|449469921|ref|XP_004152667.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Cucumis sativus]
gi|449520699|ref|XP_004167371.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Cucumis sativus]
Length = 260
Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 196/246 (79%), Gaps = 17/246 (6%)
Query: 1 MWLMKCPALVSRSLKI-PSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WLMKCP LV++S + P SD + P+AKVILS+DPLQS+E SSS +F M
Sbjct: 23 VWLMKCPLLVAKSWQAHPPSD------SLPLAKVILSLDPLQSDE-------SSSLQFKM 69
Query: 60 ELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGK 119
E+ TE+GN PK +S++M KD +PM VF+E+S GK+S+EGK+++KFDM+PH EN+E YGK
Sbjct: 70 EMAGTETGNVPKSFSLNMFKDFVPMCVFSEASQGKVSMEGKVEHKFDMKPHSENLEMYGK 129
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRR 176
LCRERTNK M K+RQIQVIDND G HMRPMPGM +IS+ EKKK P K S+VKRTRR
Sbjct: 130 LCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMVGLISSTSKEKKKVAPVKQSDVKRTRR 189
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DRGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPE
Sbjct: 190 DRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPE 249
Query: 237 YKKAAD 242
YKK+ +
Sbjct: 250 YKKSVE 255
>gi|449452114|ref|XP_004143805.1| PREDICTED: general transcription factor IIF subunit 2-like [Cucumis
sativus]
Length = 277
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/243 (65%), Positives = 195/243 (80%), Gaps = 10/243 (4%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
MWL+KCP LV+R+L N D +RPVAKVI+S+DPLQS + SSST FTME
Sbjct: 39 MWLLKCPQLVTRAL-----SNSPDAPSRPVAKVIVSVDPLQS----NDDDDSSSTEFTME 89
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
L ST+SGNA + YS++MS D IPMSVF+ESS GK ++EGKI NKFDM+PH +N+E YGKL
Sbjct: 90 LASTDSGNALRSYSLNMSTDFIPMSVFSESSQGKFTIEGKILNKFDMKPHDQNLERYGKL 149
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM-MISTGFTEKKKPQPKGSEVKRTRRDRG 179
CRERT+K MTKSRQIQVID+ G HMRPMPGM ++S G EKKK KGSE KR R++RG
Sbjct: 150 CRERTHKSMTKSRQIQVIDHVTGGHMRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERG 209
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
E+E I+FKLFERQ WT +QLIQETDQPEQ++K++LKDLCVYNNKG +QG+YELKPEY++
Sbjct: 210 ELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTYELKPEYRE 269
Query: 240 AAD 242
+++
Sbjct: 270 SSE 272
>gi|224085774|ref|XP_002307692.1| predicted protein [Populus trichocarpa]
gi|118481065|gb|ABK92486.1| unknown [Populus trichocarpa]
gi|222857141|gb|EEE94688.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 194/245 (79%), Gaps = 12/245 (4%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +V++S K +S + D + P+AKV+LS+DPLQS++ S+ +FTME
Sbjct: 21 VWLMKCPVVVAKSWKTHTSPSSSDSA--PLAKVVLSLDPLQSDD-------PSALQFTME 71
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
+ TE+GN PK YS++M KD +PM VF+E+ GK+++EGK+++KFDM+PH +N+E Y KL
Sbjct: 72 MARTEAGNVPKSYSLNMFKDFVPMCVFSETPQGKVAMEGKVEHKFDMKPHEQNIEEYHKL 131
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRRD 177
CRERT K M K RQIQVI+ND G HMRPMPGM +IS+ +KK+PQP K S+VKRTRRD
Sbjct: 132 CRERTKKSMVKIRQIQVINNDRGVHMRPMPGMVGLISSSSKDKKRPQPVKQSDVKRTRRD 191
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
RGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPEY
Sbjct: 192 RGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPEY 251
Query: 238 KKAAD 242
KK +
Sbjct: 252 KKTVE 256
>gi|224062059|ref|XP_002300734.1| predicted protein [Populus trichocarpa]
gi|222842460|gb|EEE80007.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 194/245 (79%), Gaps = 13/245 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +V++S K S DSA P+AKV+LS+DPLQS++ S+ +FTME
Sbjct: 26 VWLMKCPVVVAKSWK--SHHTSSSDSA-PLAKVVLSLDPLQSDD-------PSAIQFTME 75
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
+ TE+GN PK YS++M KD +PM VF+E+ G++S+EGK+++KFDM+PH EN+E Y KL
Sbjct: 76 MARTETGNVPKSYSLNMFKDFVPMGVFSETPQGRVSMEGKVEHKFDMKPHEENIEEYSKL 135
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRRD 177
CR+RT K M K+RQI+VIDND G HMRPMPGM +IS+ +KKK QP K S+VKRTRRD
Sbjct: 136 CRDRTKKSMIKNRQIRVIDNDRGVHMRPMPGMVGLISSTSKDKKKTQPVKQSDVKRTRRD 195
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
RGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPEY
Sbjct: 196 RGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPEY 255
Query: 238 KKAAD 242
KK A+
Sbjct: 256 KKTAE 260
>gi|255538806|ref|XP_002510468.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
communis]
gi|223551169|gb|EEF52655.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
communis]
Length = 257
Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/245 (62%), Positives = 198/245 (80%), Gaps = 16/245 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +V+RS K +S +D + PVAKV+LS+DPL+S++ S +FTME
Sbjct: 21 VWLMKCPLVVARSWKSHASSSD----SHPVAKVVLSLDPLRSDD---------SLQFTME 67
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
+ TE+GN PK YS++M KD +PMSVF+E++ G++++EGK+++KFDM+PH ENME YG+L
Sbjct: 68 MAGTENGNVPKSYSLNMFKDFVPMSVFSETTQGRVAIEGKVEHKFDMKPHEENMEEYGRL 127
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRRD 177
CRERTNK M K+RQIQVIDND G HMRPMPGM +IS+ +KKK P K S++KRTRRD
Sbjct: 128 CRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLISSSSKDKKKTAPVKQSDMKRTRRD 187
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
RGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPEY
Sbjct: 188 RGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPEY 247
Query: 238 KKAAD 242
KK+A+
Sbjct: 248 KKSAE 252
>gi|224109724|ref|XP_002315290.1| predicted protein [Populus trichocarpa]
gi|222864330|gb|EEF01461.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 184/246 (74%), Gaps = 26/246 (10%)
Query: 1 MWLMKCPALVSRSLKIPSSD-NDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WLMKCP++VSR L+ + D D S+ PVAK FTM
Sbjct: 44 VWLMKCPSIVSRFLRSQEHEVGDGDASSPPVAK------------------------FTM 79
Query: 60 ELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGK 119
E+ T G+ K YSM+MSKDL+ MSVF+ESS GK+SVEG+I NKFD+RPH EN+ENY K
Sbjct: 80 EMAGTGPGDGLKSYSMEMSKDLVDMSVFSESSQGKLSVEGRILNKFDVRPHSENLENYRK 139
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRG 179
+CRERT KYM KSRQI+VIDND GSHM PMPGM+IS G +KKK K S++KRTRRDR
Sbjct: 140 ICRERTKKYMVKSRQIKVIDNDTGSHMMPMPGMIIS-GLADKKKLPIKASDMKRTRRDRR 198
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
EME IMFKLFE+Q NWTL+QL+QETDQPEQF+KDMLKDLCVYNNKGSNQGSYELKPEYKK
Sbjct: 199 EMEGIMFKLFEKQPNWTLKQLVQETDQPEQFVKDMLKDLCVYNNKGSNQGSYELKPEYKK 258
Query: 240 AADGPA 245
+ + PA
Sbjct: 259 SNEEPA 264
>gi|317106673|dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]
Length = 262
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 193/245 (78%), Gaps = 14/245 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +V++S + +S +D + PVAKV+LS+DPL+S++ S+ +FTME
Sbjct: 24 VWLMKCPLVVAKSWQSHASSSD----SHPVAKVVLSLDPLRSDD-------PSALQFTME 72
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
+ E GN PK YS++M KD +PM VF+E+S G++++EGK+++KFDM+PH EN+E YG+L
Sbjct: 73 MAGNEIGNIPKSYSLNMFKDFVPMCVFSETSQGRVAMEGKVEHKFDMKPHEENIEEYGRL 132
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM---MISTGFTEKKKPQPKGSEVKRTRRD 177
CRERTNK M K+RQIQVIDND G HMRPMPGM M S+ +KK K S++KRTRRD
Sbjct: 133 CRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMIGLMSSSSKDKKKTAPVKQSDMKRTRRD 192
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
RGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPEY
Sbjct: 193 RGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPEY 252
Query: 238 KKAAD 242
KK+A+
Sbjct: 253 KKSAE 257
>gi|242091041|ref|XP_002441353.1| hypothetical protein SORBIDRAFT_09g025080 [Sorghum bicolor]
gi|241946638|gb|EES19783.1| hypothetical protein SORBIDRAFT_09g025080 [Sorghum bicolor]
Length = 267
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/244 (59%), Positives = 188/244 (77%), Gaps = 4/244 (1%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPV-AKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WLMKCP +VSR+ + S+ + D ++A PV AKV+LS+D L+ E + +F M
Sbjct: 17 VWLMKCPPVVSRAWQAASASSSDPNNANPVVAKVVLSLDLLRPEEPPEDRPEEPTLQFKM 76
Query: 60 ELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGK 119
EL T +GN PK YS++M KD +PM VF+ES+ GK+S EGK+++KFDM PH +N+ NYGK
Sbjct: 77 ELAQTNTGNTPKSYSLNMFKDFVPMCVFSESNQGKLSCEGKVEHKFDMEPHSDNLANYGK 136
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRR 176
LCRERT KYM KSRQ+QV+DND+G MRPMPG+ +I +G EKKK P K S+VKRTRR
Sbjct: 137 LCRERTQKYMVKSRQVQVLDNDHGMSMRPMPGLVGLIPSGSKEKKKQAPAKPSDVKRTRR 196
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DR EME+I+FKLFERQ NW L+ L+QETDQPEQFLK++L DLCVYN +G NQG++ELKPE
Sbjct: 197 DRTEMENIIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCVYNKRGPNQGTHELKPE 256
Query: 237 YKKA 240
YKK+
Sbjct: 257 YKKS 260
>gi|302142579|emb|CBI19782.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 192/245 (78%), Gaps = 15/245 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP VS+S + ++PVAKV+LS+DPL+S + S+ FTME
Sbjct: 22 VWLMKCPLAVSKS-----WQSHSSSESQPVAKVVLSLDPLRSED-------PSALEFTME 69
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
+ T + N PK YS++M KD +PM VF+E++ G++++EGK+++KFDM+PH+EN+E YGKL
Sbjct: 70 MTGTGAPNMPKSYSLNMFKDFVPMCVFSETNQGRVAMEGKVEHKFDMKPHNENIEEYGKL 129
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRRD 177
CRERTNK M K+RQIQVIDND G HMRPMPGM +I++ +KKK P KGS++KRTRRD
Sbjct: 130 CRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKKKTAPVKGSDMKRTRRD 189
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
RGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPEY
Sbjct: 190 RGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPEY 249
Query: 238 KKAAD 242
KK+A+
Sbjct: 250 KKSAE 254
>gi|359492177|ref|XP_002279990.2| PREDICTED: transcription initiation factor IIF subunit beta [Vitis
vinifera]
Length = 260
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 194/245 (79%), Gaps = 14/245 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP VS+S + ++PVAKV+LS+DPL+S ED S+ +FTME
Sbjct: 22 VWLMKCPLAVSKS-----WQSHSSSESQPVAKVVLSLDPLRS-EDPSALE-----QFTME 70
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
+ T + N PK YS++M KD +PM VF+E++ G++++EGK+++KFDM+PH+EN+E YGKL
Sbjct: 71 MTGTGAPNMPKSYSLNMFKDFVPMCVFSETNQGRVAMEGKVEHKFDMKPHNENIEEYGKL 130
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRRD 177
CRERTNK M K+RQIQVIDND G HMRPMPGM +I++ +KKK P KGS++KRTRRD
Sbjct: 131 CRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKKKTAPVKGSDMKRTRRD 190
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
RGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPEY
Sbjct: 191 RGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPEY 250
Query: 238 KKAAD 242
KK+A+
Sbjct: 251 KKSAE 255
>gi|359807121|ref|NP_001241605.1| uncharacterized protein LOC100788473 [Glycine max]
gi|255646380|gb|ACU23669.1| unknown [Glycine max]
Length = 262
Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 145/246 (58%), Positives = 190/246 (77%), Gaps = 16/246 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +V++S + ++P+AKV+LS+DPL ED S+ +FTME
Sbjct: 24 VWLMKCPLVVAKSWQA-------HPPSQPLAKVVLSLDPLHPEEDDPSA-----VQFTME 71
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESS-NGKISVEGKIKNKFDMRPHHENMENYGK 119
+ +E+ N PK YS++M KD +PM VF+E+S GK+++EGK+++KFDM+PH EN+E YGK
Sbjct: 72 MAGSEAVNMPKTYSLNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGK 131
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRR 176
LCRERTNK M K+RQIQVIDND G MRPMPGM ++S+ +KKK QP K S+ KRTRR
Sbjct: 132 LCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKKTQPVKQSDTKRTRR 191
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DRGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPE
Sbjct: 192 DRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPE 251
Query: 237 YKKAAD 242
YKK+ +
Sbjct: 252 YKKSVE 257
>gi|356518378|ref|XP_003527856.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Glycine max]
Length = 262
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/246 (58%), Positives = 189/246 (76%), Gaps = 16/246 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +V++S + ++P+AKV+LS+DPL ED S+ +FTME
Sbjct: 24 VWLMKCPLVVAKSWQT-------HPPSQPLAKVVLSLDPLHPEEDDPSA-----VQFTME 71
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESS-NGKISVEGKIKNKFDMRPHHENMENYGK 119
+ TE+ N K YS++M KD +PM VF+E+S GK+++EGK+++KFDM+PH EN+E YGK
Sbjct: 72 MAGTEAVNMSKTYSLNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGK 131
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRR 176
LCRERTNK M K+RQIQVIDND G MRPMPGM ++S+ +KKK QP K S+ KRTRR
Sbjct: 132 LCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKKTQPVKQSDTKRTRR 191
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DRGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPE
Sbjct: 192 DRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPE 251
Query: 237 YKKAAD 242
YKK+ +
Sbjct: 252 YKKSVE 257
>gi|388521215|gb|AFK48669.1| unknown [Lotus japonicus]
Length = 258
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/246 (57%), Positives = 190/246 (77%), Gaps = 15/246 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +V++S + N ++P++KV+LS+DPL +D S +FTME
Sbjct: 19 VWLMKCPVVVAKSWQ-----NHHPSPSQPLSKVVLSLDPLLPEDDPSH------LQFTME 67
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNG-KISVEGKIKNKFDMRPHHENMENYGK 119
+ +E+ N PK Y+++M KD +PM VF+E+S G K+++EGK+++KFDM+PH EN+E YGK
Sbjct: 68 MTGSEAVNMPKTYALNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGK 127
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRR 176
LCRERTNK M K+RQIQVIDND G MRPMPGM ++S+ +KK+ QP K S+ KRTRR
Sbjct: 128 LCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKRTQPVKQSDTKRTRR 187
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DRGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPE
Sbjct: 188 DRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPE 247
Query: 237 YKKAAD 242
YKK+ +
Sbjct: 248 YKKSVE 253
>gi|217075038|gb|ACJ85879.1| unknown [Medicago truncatula]
gi|388492442|gb|AFK34287.1| unknown [Medicago truncatula]
Length = 262
Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 137/246 (55%), Positives = 190/246 (77%), Gaps = 17/246 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP V++S + + ++P++KV+ SIDPL +D + +FTME
Sbjct: 25 VWLMKCPVAVAKSWQ-------NHPPSQPLSKVVFSIDPLLPEDDPAH------LQFTME 71
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNG-KISVEGKIKNKFDMRPHHENMENYGK 119
+ TE+ N PK YS++M KD +PM +F+E+S G K+++EGK+++KFDM+P HENM++YGK
Sbjct: 72 MSGTEAVNMPKTYSLNMFKDFVPMCIFSETSEGDKVAMEGKVEHKFDMKPRHENMDDYGK 131
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRR 176
LCRERT K M K+RQ+Q+I +D G+HMRPMPGM ++S+ F +KK+ QP K ++ KRTRR
Sbjct: 132 LCRERTKKSMIKNRQVQIIADDRGTHMRPMPGMVGLVSSNFKDKKRTQPVKQTDTKRTRR 191
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DRGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +LCVYN +G+NQG+YELKPE
Sbjct: 192 DRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPE 251
Query: 237 YKKAAD 242
YKK+ +
Sbjct: 252 YKKSVE 257
>gi|10045560|emb|CAC07918.1| putative protein [Arabidopsis thaliana]
Length = 376
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 183/263 (69%), Gaps = 34/263 (12%)
Query: 13 SLKIPSSDNDDDDSARPVAKVILSIDPLQSNED----SSSSSSSSSTRFTMELISTESGN 68
SL+I S + D + + +LS++ L + + +S + +F MEL +SGN
Sbjct: 112 SLEISSGPHFDHEIPCNLRIGLLSMNFLARHLNYEFLGVKHGNSFALQFVMELARADSGN 171
Query: 69 APKRYSMDMSKDLIPMSVFAESSN------------------GKISVEGKIKNKFDMRPH 110
P+RY++DMSKD IPM+VF ESS+ GK+SVEGKIKNKFDMRPH
Sbjct: 172 MPRRYTLDMSKDFIPMNVFCESSDDFGSLGEEFSIGMFIYSPGKMSVEGKIKNKFDMRPH 231
Query: 111 HENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSE 170
+EN+E+YG+LCRERTNKYM K+RQIQVIDN G HMRPMPGM+I T EKKK + SE
Sbjct: 232 NENIESYGRLCRERTNKYMGKNRQIQVIDNARGMHMRPMPGMIIPTAAPEKKKLTNRTSE 291
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPE------------QFLKDMLKDL 218
+KRTRRDR EME++MF LFERQSNWTLR LIQETDQPE QFLKD+LKDL
Sbjct: 292 MKRTRRDRREMEEVMFNLFERQSNWTLRLLIQETDQPEVCVAYGKVYLVQQFLKDLLKDL 351
Query: 219 CVYNNKGSNQGSYELKPEYKKAA 241
C+YNNKGSNQG+YELKPEYKKA
Sbjct: 352 CIYNNKGSNQGTYELKPEYKKAT 374
>gi|226506332|ref|NP_001149812.1| LOC100283439 [Zea mays]
gi|195634813|gb|ACG36875.1| ATP binding protein [Zea mays]
gi|219888615|gb|ACL54682.1| unknown [Zea mays]
gi|413945986|gb|AFW78635.1| ATP binding protein [Zea mays]
Length = 269
Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/247 (58%), Positives = 185/247 (74%), Gaps = 6/247 (2%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARP---VAKVILSIDPLQSNEDSSSSSSSSSTRF 57
+WLMKCP +VSR+ + S+ D+A VAKV+LS+D L+ E + +F
Sbjct: 17 VWLMKCPPVVSRAWQAASASASSSDAANANPVVAKVVLSLDLLRPEERPEERPEEPTLQF 76
Query: 58 TMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENY 117
MEL T +GN PK YS++M KD +PM VF+ES+ GK+S EGK+++KFDM PH +N+ NY
Sbjct: 77 KMELAQTNTGNTPKSYSLNMFKDFVPMCVFSESNQGKLSCEGKVEHKFDMEPHSDNLANY 136
Query: 118 GKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRT 174
GKLCRERT KYM KSRQ+QV+DND+G MRPMPG+ +I +G EKKK P K S+VKRT
Sbjct: 137 GKLCRERTQKYMVKSRQVQVLDNDHGMSMRPMPGLVGLIPSGSKEKKKQAPAKPSDVKRT 196
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
RRDR EME+I+FKLFERQ NW L+ L+QETDQPEQFLK++L DLCVYN +G NQG++ELK
Sbjct: 197 RRDRTEMENIIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCVYNKRGPNQGTHELK 256
Query: 235 PEYKKAA 241
PEYKK+
Sbjct: 257 PEYKKST 263
>gi|297842295|ref|XP_002889029.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334870|gb|EFH65288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 260
Score = 286 bits (731), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 187/252 (74%), Gaps = 15/252 (5%)
Query: 1 MWLMKCPALVSRSLK--IPSSDNDDDDSARP-VAKVILSIDPLQSNEDSSSSSSSSSTRF 57
+WLMKCP +V+++ + PSS + + P +AKV+L +DPL+ + S F
Sbjct: 16 IWLMKCPVVVAKTWEKLAPSSSSYSSSDSLPNLAKVVLDVDPLRPD---------YSPEF 66
Query: 58 TMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENY 117
TM++++ E GN PK Y+++M KD +PM F+E++ +VEG + +KFDM+PH EN+E Y
Sbjct: 67 TMQMVAAEYGNMPKCYALNMFKDFVPMEAFSETNLVNTAVEGNVDHKFDMKPHGENIEEY 126
Query: 118 GKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM--ISTGFTEKKKPQP-KGSEVKRT 174
+LCRERT+K M K+RQIQVIDND G HMRPMPGM+ +S+ EK+KP P K +EVKRT
Sbjct: 127 ARLCRERTSKAMVKNRQIQVIDNDRGVHMRPMPGMLGLVSSNSKEKRKPPPVKQTEVKRT 186
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
RRDRGE+E IMFKLFE Q NWTL+QL+QETDQP QFLK++L +LCVYN +GSNQG+YELK
Sbjct: 187 RRDRGELEAIMFKLFEGQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGSNQGTYELK 246
Query: 235 PEYKKAADGPAS 246
PEYKK+A+ A
Sbjct: 247 PEYKKSAEDDAG 258
>gi|326493564|dbj|BAJ85243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/251 (54%), Positives = 187/251 (74%), Gaps = 14/251 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +VS++ + S+ + D + VAKV+LS+DPL SS+ S +F ME
Sbjct: 17 VWLMKCPPVVSQAWQGASASSGDANPNPVVAKVVLSLDPL--------SSAEPSLQFKME 68
Query: 61 LISTE---SGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENY 117
+ T + N PK YS++M KD +PM VF+E++ GK+S EGK+++KFDM PH +N+ NY
Sbjct: 69 MSQTSVASTCNLPKSYSLNMFKDFVPMCVFSETNQGKLSCEGKVEHKFDMEPHKDNLLNY 128
Query: 118 GKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRT 174
KLCRERT K M K+R++QV+DND+G MRPMPGM +IS+ EK+KP P K S+VKRT
Sbjct: 129 AKLCRERTQKSMVKTRKVQVLDNDHGMSMRPMPGMVGLISSSSKEKRKPTPTKPSDVKRT 188
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
RRDR E+E+I FKLFE+Q NW L+ L+QETDQPEQFLK++L DLC+YN +G NQG++ELK
Sbjct: 189 RRDRRELENITFKLFEKQPNWALKALVQETDQPEQFLKEILNDLCMYNKRGPNQGTHELK 248
Query: 235 PEYKKAADGPA 245
PEYKK+++ A
Sbjct: 249 PEYKKSSEDAA 259
>gi|357133056|ref|XP_003568144.1| PREDICTED: transcription initiation factor IIF subunit beta-like
isoform 1 [Brachypodium distachyon]
Length = 261
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 188/248 (75%), Gaps = 14/248 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +VS++ + S+ + D + VAKV+LS+DPL SS+ S +F ME
Sbjct: 17 VWLMKCPPVVSQAWQGASASSGDGNPNPVVAKVVLSLDPL--------SSAEPSIKFKME 68
Query: 61 LISTE--SGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYG 118
+ T + N PK YS++M KD +PM VF+E++ GK+S EGK+++KFDM PH +N+ NY
Sbjct: 69 MAQTRDITCNLPKSYSLNMFKDFVPMCVFSEANQGKLSCEGKVEHKFDMEPHKDNLINYA 128
Query: 119 KLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFT-EKKKPQP-KGSEVKRT 174
KLCRERT K M K+R++QV+DND+G MRP+PGM +I +G + EK+KP P K S+VKRT
Sbjct: 129 KLCRERTQKSMVKTRKVQVLDNDHGMSMRPLPGMVGLIPSGSSKEKRKPTPTKPSDVKRT 188
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
RRDR E+E+I+FKLFE+Q NW L+ L+QETDQPEQFLK++L DLC+YN +G NQG++ELK
Sbjct: 189 RRDRRELENIIFKLFEKQPNWALKALVQETDQPEQFLKEILNDLCMYNKRGPNQGTHELK 248
Query: 235 PEYKKAAD 242
PEYKK+++
Sbjct: 249 PEYKKSSE 256
>gi|357133058|ref|XP_003568145.1| PREDICTED: transcription initiation factor IIF subunit beta-like
isoform 2 [Brachypodium distachyon]
Length = 279
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/258 (52%), Positives = 189/258 (73%), Gaps = 16/258 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDS-----------SSS 49
+WLMKCP +VS++ + S+ + D + VAKV+LS+DPL S E S S
Sbjct: 17 VWLMKCPPVVSQAWQGASASSGDGNPNPVVAKVVLSLDPLSSAEPSIKARTPPRRPRCSP 76
Query: 50 SSSSSTRFTMELISTE--SGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDM 107
+ +F ME+ T + N PK YS++M KD +PM VF+E++ GK+S EGK+++KFDM
Sbjct: 77 PPTCLLQFGMEMAQTRDITCNLPKSYSLNMFKDFVPMCVFSEANQGKLSCEGKVEHKFDM 136
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQ 165
PH +N+ NY KLCRERT K M K+R++QV+DND+G MRP+PGM +I +G ++K+KP
Sbjct: 137 EPHKDNLINYAKLCRERTQKSMVKTRKVQVLDNDHGMSMRPLPGMVGLIPSGSSKKRKPT 196
Query: 166 P-KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNK 224
P K S+VKRTRRDR E+E+I+FKLFE+Q NW L+ L+QETDQPEQFLK++L DLC+YN +
Sbjct: 197 PTKPSDVKRTRRDRRELENIIFKLFEKQPNWALKALVQETDQPEQFLKEILNDLCMYNKR 256
Query: 225 GSNQGSYELKPEYKKAAD 242
G NQG++ELKPEYKK+++
Sbjct: 257 GPNQGTHELKPEYKKSSE 274
>gi|219362667|ref|NP_001136767.1| hypothetical protein [Zea mays]
gi|194696976|gb|ACF82572.1| unknown [Zea mays]
gi|413949783|gb|AFW82432.1| hypothetical protein ZEAMMB73_178832 [Zea mays]
gi|413949784|gb|AFW82433.1| hypothetical protein ZEAMMB73_178832 [Zea mays]
Length = 272
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 186/244 (76%), Gaps = 8/244 (3%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPV-AKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WLMKCP +VSR+ + S+ + D +A PV AKV+LS+D L+ E + +F M
Sbjct: 26 VWLMKCPPVVSRAWQAASASSSDAANANPVVAKVVLSLDLLRQEE----RPEEPTLQFKM 81
Query: 60 ELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGK 119
EL T +GN PK YS++M KD +PM VF+ES+ GK+S EGK+++KFDM PH +N+ NYGK
Sbjct: 82 ELAQTNTGNTPKSYSLNMFKDFVPMCVFSESNQGKLSCEGKVEHKFDMEPHSDNLANYGK 141
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRR 176
LCRERT KYM KSRQ+QV+DND+G MRPMPG+ +IS+ EKKK P K S+ KRTRR
Sbjct: 142 LCRERTQKYMVKSRQVQVLDNDHGMSMRPMPGIVGLISSSSKEKKKQAPVKPSDAKRTRR 201
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DR EME+++FKLFERQ NW L+ L+QETDQPEQFLK++L DLCVYN +G NQG++ELKPE
Sbjct: 202 DRTEMENVIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCVYNKRGPNQGTHELKPE 261
Query: 237 YKKA 240
YKK+
Sbjct: 262 YKKS 265
>gi|357136669|ref|XP_003569926.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Brachypodium distachyon]
Length = 261
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/249 (54%), Positives = 185/249 (74%), Gaps = 16/249 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARP-----VAKVILSIDPLQSNEDSSSSSSSSST 55
+WLMKCP +VSR+ + +S +P VAKVILS+DPL S++D +
Sbjct: 17 VWLMKCPTIVSRAWQ-EASAASAAGGPKPNPNPVVAKVILSLDPLSSDDDPA-------- 67
Query: 56 RFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENME 115
+F ME+ T++GN PK YS++M KD +PMSVF+ES+ GK++ EGK++ KFDM PH EN+
Sbjct: 68 QFKMEMAQTDNGNKPKSYSLNMFKDFVPMSVFSESNQGKLACEGKVEYKFDMEPHRENLS 127
Query: 116 NYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM-ISTGFTEKKKPQP-KGSEVKR 173
+Y KLCRERT K M K+R++ V++ DNG MRP+ ++ ++ G EKKK P K S++KR
Sbjct: 128 DYAKLCRERTEKSMIKTRKVHVLEKDNGMGMRPLLNIISLTPGLKEKKKSIPAKVSDMKR 187
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
TRRDRGE+E I+FKLFERQ NW+L+ L+QETDQPEQFLK+++ DLCVYN +G NQG++EL
Sbjct: 188 TRRDRGELEIILFKLFERQPNWSLKHLMQETDQPEQFLKEIMNDLCVYNKRGPNQGTHEL 247
Query: 234 KPEYKKAAD 242
KPEYKK+A+
Sbjct: 248 KPEYKKSAE 256
>gi|449521623|ref|XP_004167829.1| PREDICTED: general transcription factor IIF subunit 2-like [Cucumis
sativus]
Length = 190
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 59 MELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYG 118
MEL ST+SGNA + YS++MS D IPMSVF+ESS GK ++EGKI NKFDM+PH +N+E YG
Sbjct: 1 MELASTDSGNALRSYSLNMSTDFIPMSVFSESSQGKFTIEGKILNKFDMKPHDQNLERYG 60
Query: 119 KLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM-MISTGFTEKKKPQPKGSEVKRTRRD 177
KLCRERT+K MTKSRQIQVID+ G HMRPMPGM ++S G EKKK KGSE KR R++
Sbjct: 61 KLCRERTHKSMTKSRQIQVIDHVTGGHMRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKE 120
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
RGE+E I+FKLFERQ WT +QLIQETDQPEQ++K++LKDLCVYNNKG +QG+YELKPEY
Sbjct: 121 RGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTYELKPEY 180
Query: 238 KKAAD 242
+++++
Sbjct: 181 RESSE 185
>gi|115464811|ref|NP_001056005.1| Os05g0509900 [Oryza sativa Japonica Group]
gi|48475207|gb|AAT44276.1| putative transcription initiation factor [Oryza sativa Japonica
Group]
gi|113579556|dbj|BAF17919.1| Os05g0509900 [Oryza sativa Japonica Group]
gi|215706385|dbj|BAG93241.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632183|gb|EEE64315.1| hypothetical protein OsJ_19152 [Oryza sativa Japonica Group]
Length = 259
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 180/246 (73%), Gaps = 14/246 (5%)
Query: 1 MWLMKCPALVSRSLK--IPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFT 58
+WLMKCP +VS + + + SSD + VAKV+LS+D L+S E S +F
Sbjct: 17 VWLMKCPPVVSHAWQGAVSSSDAAGSNPNPVVAKVVLSLDLLRSEE--------PSLQFK 68
Query: 59 MELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYG 118
ME+ T +GN PK YS++MSKD +PM VF+ES+ GK+S EGK+++KFDM+PH +N+ NYG
Sbjct: 69 MEMAQTNTGNTPKSYSLNMSKDFVPMCVFSESNQGKLSCEGKVEHKFDMKPHSDNLVNYG 128
Query: 119 KLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTR 175
KLCRERT K M K+R++QVI+ D+ + P+PGM +I +G EKKK P K S+ KR R
Sbjct: 129 KLCRERTQKSMIKTRKVQVIE-DHRMSLIPLPGMVGLIPSGSKEKKKQTPTKPSDAKRIR 187
Query: 176 RDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKP 235
RDR E+E+I+FKLFERQ NW L+ L+QETDQPEQFLK++L DLC YN +G NQG++ELKP
Sbjct: 188 RDRRELENIIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCFYNKRGPNQGTHELKP 247
Query: 236 EYKKAA 241
EYKK+
Sbjct: 248 EYKKST 253
>gi|413945985|gb|AFW78634.1| hypothetical protein ZEAMMB73_145723 [Zea mays]
Length = 200
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 154/189 (81%), Gaps = 3/189 (1%)
Query: 56 RFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENME 115
+F MEL T +GN PK YS++M KD +PM VF+ES+ GK+S EGK+++KFDM PH +N+
Sbjct: 6 QFKMELAQTNTGNTPKSYSLNMFKDFVPMCVFSESNQGKLSCEGKVEHKFDMEPHSDNLA 65
Query: 116 NYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVK 172
NYGKLCRERT KYM KSRQ+QV+DND+G MRPMPG+ +I +G EKKK P K S+VK
Sbjct: 66 NYGKLCRERTQKYMVKSRQVQVLDNDHGMSMRPMPGLVGLIPSGSKEKKKQAPAKPSDVK 125
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
RTRRDR EME+I+FKLFERQ NW L+ L+QETDQPEQFLK++L DLCVYN +G NQG++E
Sbjct: 126 RTRRDRTEMENIIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCVYNKRGPNQGTHE 185
Query: 233 LKPEYKKAA 241
LKPEYKK+
Sbjct: 186 LKPEYKKST 194
>gi|15222264|ref|NP_177683.1| transcription initiation factor TFIIF beta subunit [Arabidopsis
thaliana]
gi|9369371|gb|AAF87120.1|AC006434_16 F10A5.27 [Arabidopsis thaliana]
gi|11692842|gb|AAG40024.1|AF324673_1 At1g75700 [Arabidopsis thaliana]
gi|11935195|gb|AAG42013.1|AF327423_1 putative transcription initiation factor [Arabidopsis thaliana]
gi|12642908|gb|AAK00396.1|AF339714_1 putative transcription initiation factor [Arabidopsis thaliana]
gi|39545896|gb|AAR28011.1| TFIIF-beta 2 [Arabidopsis thaliana]
gi|110741044|dbj|BAE98616.1| putative transcription initiation factor [Arabidopsis thaliana]
gi|332197607|gb|AEE35728.1| transcription initiation factor TFIIF beta subunit [Arabidopsis
thaliana]
Length = 261
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/249 (53%), Positives = 179/249 (71%), Gaps = 16/249 (6%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARP---VAKVILSIDPLQSNEDSSSSSSSSSTR 56
+WLMKCP +V ++ KI +S + S+ +AK++ +DPL+ + S
Sbjct: 16 IWLMKCPVVVDKAWHKIAASSSSSFASSDSPPDMAKIVREVDPLRDD---------SPPE 66
Query: 57 FTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMEN 116
F M ++ E GN PK Y+++M D +PM F++ + G + EGK+ +KFDM+P+ E +E
Sbjct: 67 FKMYMVGAEYGNMPKCYALNMFTDFVPMGGFSDVNQGCAAAEGKVDHKFDMKPYGETIEE 126
Query: 117 YGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM--ISTGFTEKKKPQP-KGSEVKR 173
Y +LCRERT+K M K+RQIQVIDND G HMRPMPGM+ +S+ EK+KP P K +EVKR
Sbjct: 127 YARLCRERTSKAMVKNRQIQVIDNDRGVHMRPMPGMLGLVSSNSKEKRKPPPVKQTEVKR 186
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
TRRDRGE+E IMFKLFE Q NWTL+QL+QETDQP QFLK++L +LCVYN +GSNQG+YEL
Sbjct: 187 TRRDRGELEAIMFKLFEGQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGSNQGTYEL 246
Query: 234 KPEYKKAAD 242
KPEYKK+A+
Sbjct: 247 KPEYKKSAE 255
>gi|56785216|dbj|BAD82068.1| putative transcription initiation factor IIF beta subunit [Oryza
sativa Japonica Group]
Length = 277
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/269 (51%), Positives = 188/269 (69%), Gaps = 31/269 (11%)
Query: 1 MWLMKCPALVSRSLK----------------IPSSDNDDDDSARPVAKVILSIDPLQSNE 44
+WLMKCP +VSR+ + ++ N + + VAKVI+S+DPL+S +
Sbjct: 17 VWLMKCPTVVSRAWQEAATAAASSSSSSDAAAGANSNSNANPNPVVAKVIVSLDPLRSED 76
Query: 45 DSSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNK 104
+F ME+ T +GN PK YS++M KD +PM VF+ES+ GK+S EGK+ +K
Sbjct: 77 --------QQLQFKMEMAQTGNGNTPKSYSLNMFKDFVPMCVFSESNQGKLSCEGKVGHK 128
Query: 105 FDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEK- 161
FDM PH +N+ NYGKLCRERT K M K+R++ V+ NDNG MRP+PG+ ++S+G +K
Sbjct: 129 FDMEPHSDNLVNYGKLCRERTQKSMIKNRKLMVLANDNGMSMRPLPGLVGLMSSGPKQKE 188
Query: 162 KKPQP-KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCV 220
KKP P K S++KRTRRDR E+E+I+FKLFERQ NW+L+ L+QETDQPEQFLK++L DLC
Sbjct: 189 KKPLPVKPSDMKRTRRDRRELENILFKLFERQPNWSLKNLMQETDQPEQFLKEILNDLCF 248
Query: 221 YNNKGSNQGSYELKPEYKKA---ADGPAS 246
YN +G NQG++ELKPEYKK+ AD A+
Sbjct: 249 YNKRGPNQGTHELKPEYKKSTEDADATAT 277
>gi|218197080|gb|EEC79507.1| hypothetical protein OsI_20575 [Oryza sativa Indica Group]
Length = 259
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/246 (54%), Positives = 178/246 (72%), Gaps = 14/246 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDD-SARPV-AKVILSIDPLQSNEDSSSSSSSSSTRFT 58
+WLMKCP +VS + + S + + PV AKV+LS+D L+S E S +F
Sbjct: 17 VWLMKCPPVVSHAWQGAVSSSSAAGSNPNPVVAKVVLSLDLLRSEE--------PSLQFK 68
Query: 59 MELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYG 118
ME+ T +GN PK YS++MSKD +PM VF+ES+ GK+S EGK+++KFDM+PH +N+ NYG
Sbjct: 69 MEMAQTNTGNTPKSYSLNMSKDFVPMCVFSESNQGKLSCEGKVEHKFDMKPHSDNLVNYG 128
Query: 119 KLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEKKKPQP-KGSEVKRTR 175
KLCRERT K M K+R++QVI+ D+ + P+PGM +I +G EKKK P K S+ KR R
Sbjct: 129 KLCRERTQKSMIKTRKVQVIE-DHRMSLIPLPGMVGLIPSGSKEKKKQTPTKPSDAKRIR 187
Query: 176 RDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKP 235
RDR E+E+I+FKLFERQ NW L+ L+QETDQPEQFLK++L DLC YN + NQG++ELKP
Sbjct: 188 RDRRELENIIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCFYNKRRPNQGTHELKP 247
Query: 236 EYKKAA 241
EYKK+
Sbjct: 248 EYKKST 253
>gi|294464268|gb|ADE77647.1| unknown [Picea sitchensis]
Length = 293
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 188/275 (68%), Gaps = 40/275 (14%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSN--------EDSSSSSSS 52
+WLMKCP ++ ++ K S DS +P+AK+ +S+DP +++ ED ++ S++
Sbjct: 21 VWLMKCPLVIGQAWKEIS------DSGQPLAKITVSVDPCKADDQPIEAKVEDPTAPSAT 74
Query: 53 S---------------------STRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESS 91
+ F ME+ + S APK YS++MS ++IPM +F+E+S
Sbjct: 75 RRKVERQQMSSSRSQTQSTHRIKSEFMMEVAANGSVTAPKSYSLNMSTEIIPMYIFSETS 134
Query: 92 NGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPG 151
GK++V+GK+++KFDM+PH +N+++Y +LCRERTNK K+RQ+QVIDND G + PM G
Sbjct: 135 EGKVAVDGKVEHKFDMKPHTKNIDDYRRLCRERTNKSNFKARQVQVIDNDRGGY-NPMQG 193
Query: 152 MM-ISTGFTEKKKPQP---KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
MM ST ++ KK K E+KRTR DRGE+E+I+FKLFERQSNWTL+QL+ ETDQP
Sbjct: 194 MMDFSTILSKDKKGSAAPVKAQEMKRTRMDRGELENILFKLFERQSNWTLKQLVTETDQP 253
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAAD 242
+QF+K++L DL +YN +G+NQG+YELKPEYKK+ +
Sbjct: 254 QQFIKEILNDLGLYNKRGTNQGTYELKPEYKKSTE 288
>gi|125527873|gb|EAY75987.1| hypothetical protein OsI_03910 [Oryza sativa Indica Group]
gi|222619327|gb|EEE55459.1| hypothetical protein OsJ_03621 [Oryza sativa Japonica Group]
Length = 261
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 181/253 (71%), Gaps = 15/253 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WLMKCP +VSR+ + + + + S +N +S+++ + +F ME
Sbjct: 17 VWLMKCPTVVSRAWQ--------EAATAAASSSSSSDAAAGANSNSNANPNPVVAKFKME 68
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
+ T +GN PK YS++M KD +PM VF+ES+ GK+S EGK+ +KFDM PH +N+ NYGKL
Sbjct: 69 MAQTGNGNTPKSYSLNMFKDFVPMCVFSESNQGKLSCEGKVGHKFDMEPHSDNLVNYGKL 128
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM--MISTGFTEK-KKPQP-KGSEVKRTRR 176
CRERT K M K+R++ V+ NDNG MRP+PG+ ++S+G +K KKP P K S++KRTRR
Sbjct: 129 CRERTQKSMIKNRKLMVLANDNGMSMRPLPGLVGLMSSGPKQKEKKPLPVKPSDMKRTRR 188
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
DR E+E+I+FKLFERQ NW+L+ L+QETDQPEQFLK++L DLC YN +G NQG++ELKPE
Sbjct: 189 DRRELENILFKLFERQPNWSLKNLMQETDQPEQFLKEILNDLCFYNKRGPNQGTHELKPE 248
Query: 237 YKKA---ADGPAS 246
YKK+ AD A+
Sbjct: 249 YKKSTEDADATAT 261
>gi|147863867|emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera]
Length = 584
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/248 (54%), Positives = 159/248 (64%), Gaps = 62/248 (25%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTR---- 56
+WLMKCP +VSRS S + DS RPVAKVI+S+DPL +N+D S
Sbjct: 20 VWLMKCPPVVSRS----LSSSSASDSLRPVAKVIVSLDPLLANDDDDSPPQGFMIAHEHA 75
Query: 57 -----FTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHH 111
FTMEL TESGNAPK YSMDMS+D IPM+VF+ESS G+ +VEGKI NKFDM+PH+
Sbjct: 76 FDYELFTMELAGTESGNAPKCYSMDMSQDFIPMAVFSESSQGRTAVEGKILNKFDMKPHN 135
Query: 112 ENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEV 171
EN++NYGKLCRERT+KYMTKSRQIQVIDNDNGSHMRPMPGM+I++ +
Sbjct: 136 ENIQNYGKLCRERTSKYMTKSRQIQVIDNDNGSHMRPMPGMVIASAVS------------ 183
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
QFLKD+LKDLCVYNNKG+NQG+Y
Sbjct: 184 -------------------------------------QFLKDLLKDLCVYNNKGTNQGTY 206
Query: 232 ELKPEYKK 239
ELKPEYK+
Sbjct: 207 ELKPEYKR 214
>gi|168039739|ref|XP_001772354.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676341|gb|EDQ62825.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 155/247 (62%), Gaps = 25/247 (10%)
Query: 1 MWLMKCPALVSRS-LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P LV LK D A +AKV +S+DPL N DS F M
Sbjct: 32 VWLLKVPPLVGHQWLK-------QQDGAPVLAKVTMSMDPLNPNSDS--------VEFMM 76
Query: 60 ELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHH-ENMENYG 118
L + K Y+++++KDL+PM +F+E++ GK+ VEGK+++KFDM+P + N + Y
Sbjct: 77 TLPEKDLVAPHKSYNLNVTKDLVPMHIFSETTQGKLKVEGKVEHKFDMKPSNIGNNDEYR 136
Query: 119 KLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQP-----KGSEVKR 173
KLCR+R NK M K+R QV+ ND G MRP P I T KK P K E KR
Sbjct: 137 KLCRDRLNKSMVKTRTTQVLSNDRGGFMRPPP---IDAWPTSTKKKAPISSAVKAPEGKR 193
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
RRDR E+E I+FKLFE++ NW L+ L++ETDQP FLK++L DLC+YN +G+NQG+YEL
Sbjct: 194 IRRDRVELEAIVFKLFEQRPNWALKHLVEETDQPVAFLKEILNDLCIYNKRGANQGTYEL 253
Query: 234 KPEYKKA 240
KPEYK+
Sbjct: 254 KPEYKRT 260
>gi|302795362|ref|XP_002979444.1| hypothetical protein SELMODRAFT_111128 [Selaginella moellendorffii]
gi|300152692|gb|EFJ19333.1| hypothetical protein SELMODRAFT_111128 [Selaginella moellendorffii]
Length = 270
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 162/255 (63%), Gaps = 33/255 (12%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVA-----------KVILSIDPLQSNEDSSSS 49
+WL+K PA+V+ + N D S + VA KV + DPL + +++
Sbjct: 20 VWLLKLPAIVATAW------NAQDSSGKSVAAGAGPADPTLAKVTCTFDPLNPDPEAA-- 71
Query: 50 SSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRP 109
FTMEL + A YS+++ KD++P +F+++ G+++VEGK++ KFD++P
Sbjct: 72 -----LEFTMELSGPDDIKA---YSLNLQKDVVPTHIFSDT-QGRLAVEGKVERKFDIKP 122
Query: 110 HHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPM--PGMMISTGFTEKKKPQP- 166
+ + E Y +LCRER K+ K+R IQV+ +D G+ MRP P +M+ + K+ P
Sbjct: 123 NSKAREEYRQLCRERDRKFNMKTRTIQVLKDDRGNLMRPALPPTIMLQSSKDAAKRKAPV 182
Query: 167 --KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNK 224
K ++ KRTRR+RGE+ED +FKLFE+Q+NW L+QL+Q TDQP FLK++L DLC YN +
Sbjct: 183 NAKNNDGKRTRRERGELEDHVFKLFEQQANWALKQLVQRTDQPVAFLKEILNDLCTYNKR 242
Query: 225 GSNQGSYELKPEYKK 239
G+NQG+YELKPEY+K
Sbjct: 243 GTNQGTYELKPEYRK 257
>gi|302792232|ref|XP_002977882.1| transcription factor [Selaginella moellendorffii]
gi|300154585|gb|EFJ21220.1| transcription factor [Selaginella moellendorffii]
Length = 262
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 162/249 (65%), Gaps = 21/249 (8%)
Query: 1 MWLMKCPALVSRSLKIP-SSDNDDDDSARP----VAKVILSIDPLQSNEDSSSSSSSSST 55
+WL+K PA+V+ + SS A P +AKV + DPL + +++
Sbjct: 20 VWLLKLPAIVATAWNAQDSSGKSVAAGAGPADPTLAKVTCTFDPLNPDPEAA-------L 72
Query: 56 RFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENME 115
FTMEL + A YS+++ KD++P +F+++ G+++VEGK++ KFD++P+ + E
Sbjct: 73 EFTMELSGPDDIKA---YSLNLQKDVVPTHIFSDTQ-GRLAVEGKVERKFDIKPNSKARE 128
Query: 116 NYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPM--PGMMISTGFTEKKKPQP---KGSE 170
Y +LCRER K+ K+R IQV+ +D G+ MRP P +M+ + K+ P K ++
Sbjct: 129 EYRQLCRERDRKFNMKTRTIQVLKDDRGNLMRPALPPTIMLQSSKDAAKRKAPVNAKNND 188
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
KRTRR+RGE+ED +FKLFE+Q+NW L+QL+Q TDQP FLK++L DLC YN +G+NQG+
Sbjct: 189 GKRTRRERGELEDHVFKLFEQQANWALKQLVQRTDQPVAFLKEILNDLCTYNKRGTNQGT 248
Query: 231 YELKPEYKK 239
YELKPEY+K
Sbjct: 249 YELKPEYRK 257
>gi|297819942|ref|XP_002877854.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323692|gb|EFH54113.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 130
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 112/147 (76%), Gaps = 19/147 (12%)
Query: 95 ISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMI 154
+SVEGKIKNK+DMRPH+EN+E+Y VID+ G HMRPMP M+I
Sbjct: 1 MSVEGKIKNKYDMRPHNENIESY-------------------VIDDARGMHMRPMPEMII 41
Query: 155 STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDM 214
T EKKK + SE+KRTRRDR EME++MF LFERQSNWTLR LIQETDQPEQFLKD+
Sbjct: 42 PTAAPEKKKLTNRTSEMKRTRRDRREMEEVMFNLFERQSNWTLRLLIQETDQPEQFLKDL 101
Query: 215 LKDLCVYNNKGSNQGSYELKPEYKKAA 241
L+DLC+YNNKGSNQG+YELKPEYKKA
Sbjct: 102 LRDLCIYNNKGSNQGTYELKPEYKKAT 128
>gi|255585869|ref|XP_002533609.1| ATP binding protein, putative [Ricinus communis]
gi|223526510|gb|EEF28778.1| ATP binding protein, putative [Ricinus communis]
Length = 139
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 103/142 (72%), Gaps = 15/142 (10%)
Query: 4 MKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTMELIS 63
MKCP +V+RS K +S +D + PV KV+LS+DPL+S++ S +FTME+
Sbjct: 1 MKCPLVVARSWKSHASSSD----SHPVDKVVLSLDPLRSDD---------SLQFTMEMAG 47
Query: 64 TESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRE 123
TE+GN PK YS++M KD +PMSVF+E++ G++++EGK+++KFDM PH EN E YG LCRE
Sbjct: 48 TENGNVPKSYSLNMFKDFVPMSVFSETTQGRVAMEGKVEHKFDMNPHEENTEEYGSLCRE 107
Query: 124 RTNKYMTKSRQIQVIDNDNGSH 145
RTNK M K+RQI IDND G H
Sbjct: 108 RTNKSMIKNRQI--IDNDRGVH 127
>gi|224032837|gb|ACN35494.1| unknown [Zea mays]
Length = 107
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 81/99 (81%), Gaps = 3/99 (3%)
Query: 146 MRPMPGM--MISTGFTEKKKPQP-KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQ 202
MRPMPG+ +IS+ EKKK P K S+ KRTRRDR EME+++FKLFERQ NW L+ L+Q
Sbjct: 3 MRPMPGIVGLISSSSKEKKKQAPVKPSDAKRTRRDRTEMENVIFKLFERQPNWALKALVQ 62
Query: 203 ETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
ETDQPEQFLK++L DLCVYN +G NQG++ELKPEYKK+
Sbjct: 63 ETDQPEQFLKEILNDLCVYNKRGPNQGTHELKPEYKKST 101
>gi|308811420|ref|XP_003083018.1| putative transcription initiation factor (ISS) [Ostreococcus tauri]
gi|116054896|emb|CAL56973.1| putative transcription initiation factor (ISS) [Ostreococcus tauri]
Length = 347
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 45/258 (17%)
Query: 2 WLMKCPALVSRSL--------KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSS 53
W++K P VSR L ++PS ++D D +D Q+++ + +
Sbjct: 111 WIIKVPKFVSRVLHDAAAANIQMPSMEDDMD------------VDMTQTDK------TKA 152
Query: 54 STRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNG-------KISVEGKIKNKFD 106
T+ MEL E+ + PK+Y + +PM VF++ G I++E +I K D
Sbjct: 153 MTQGVMELTGKEAASVPKKYILANQATDMPMHVFSDVREGLKLGGHQDITLEARIDLKLD 212
Query: 107 MRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR--PMPGMMISTGFTEKKKP 164
MRP + +Y ++ +ER + TK+R Q + S MR P+P FT
Sbjct: 213 MRPSSIDDVDYNRVSKERMEQAQTKTRVTQ-----SSSEMRFAPLPKRANLVRFTA---- 263
Query: 165 QPKGSEV-KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNN 223
G++ K+ R ++ +E+++F LFE+Q W+++QL+ E+ QP +LK L ++ +
Sbjct: 264 DAVGAKTEKKERMEKKALENLLFGLFEKQPYWSMKQLLLESKQPADWLKTNLSEIAILTR 323
Query: 224 KGSNQGSYELKPEYKKAA 241
+G N G + LKPE+K+A
Sbjct: 324 RGPNMGLWGLKPEWKQAG 341
>gi|384254108|gb|EIE27582.1| winged helix DNA-binding domain-containing protein [Coccomyxa
subellipsoidea C-169]
Length = 189
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 8/179 (4%)
Query: 70 PKRYSM-DMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMEN-----YGKLCRE 123
P+ + + + + + P VFA+ G++S EG++K KFD+ + Y ++ R+
Sbjct: 2 PQAFDLTEQTDNFAPTLVFADL-QGRLSAEGRVKRKFDLVMKSSGDLDALDPAYRQINRD 60
Query: 124 RTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTE-KKKPQPKGSEVKRTRRDRGEME 182
R+ K K+R +QV+ + MRP +S G E +K KG +R R ++ ++E
Sbjct: 61 RSAKAAAKTRTMQVLSEAPDTQMRPGAVQRVSFGNKESTRKRFEKGQFERRARMEKDDLE 120
Query: 183 DIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
+++F+LFERQS W QL +ETDQP +LK++L ++ V N +G N +ELK EY+ A
Sbjct: 121 NLLFRLFERQSRWNFIQLQKETDQPAVWLKEVLGEVAVLNKRGPNANLWELKKEYRAAG 179
>gi|168039837|ref|XP_001772403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676390|gb|EDQ62874.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 111/238 (46%), Gaps = 52/238 (21%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P LV D A +AKV +S+DPL N DS F M
Sbjct: 32 VWLLKVPPLVGHQWL------KQQDGAPVLAKVTMSMDPLNPNSDS--------VEFMMT 77
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESS-------------------------NGKI 95
L + K Y+++++KDL+PM +F+E++ K+
Sbjct: 78 LPEKDLVAPHKSYNLNVTKDLVPMHIFSETTQEDEEAACGGVRIGKADVWKQTQACGWKL 137
Query: 96 SVEGKIKNKFDMRPHH-ENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMP-GMM 153
VEGK+++KFDM+P + N + Y KLCR+R NK M K+R QV+ ND G MRP P
Sbjct: 138 KVEGKVEHKFDMKPSNIGNNDEYRKLCRDRLNKSMVKTRTTQVLSNDRGGFMRPPPIDAW 197
Query: 154 ISTGFTEKKKPQPKGSEVK----------RTRRDRGEMEDIMFKLF-ERQSNWTLRQL 200
++ FT K + S V+ R RRDRGE E +L E W L ++
Sbjct: 198 PTSTFTGKGCSGVEWSGVEARVGVTRFEVRFRRDRGEAEGGHARLRNEIGCGWWLHEM 255
>gi|384498641|gb|EIE89132.1| hypothetical protein RO3G_13843 [Rhizopus delemar RA 99-880]
Length = 298
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 25/245 (10%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P ++ + K DN + + L+ +D+ SS R ++
Sbjct: 39 VWLVKVPKFLAETWKNIDQDN-------------VHLGSLRIYKDAQPPGKSS--RISLV 83
Query: 61 LI-STESGNAPKRYSMDM-SKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYG 118
L +T + + PK YS+ + S ++ VF+++ +GK ++ G + ++ P N Y
Sbjct: 84 LPENTMTSHIPKEYSISLLSAEVQNKFVFSQTEHGK-TISGTVHHECVAVPTEANA--YR 140
Query: 119 KLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTG----FTEKKKPQPKGSEVKRT 174
+ R+R + T R QV+ +N P + + F KKP+ E K T
Sbjct: 141 NIMRKRVREAGTPQRTTQVLGQNNQPVFVPGASSAVPSSDFSDFVTSKKPKTDNKE-KAT 199
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
R R E+ D++F F+R W+ + +++ET QP Q+LK++L ++C+ N +G G+Y+LK
Sbjct: 200 RMPRNELMDLLFAAFDRYPYWSFKGILEETKQPSQYLKEILSEICILNKRGPYAGNYQLK 259
Query: 235 PEYKK 239
EYK+
Sbjct: 260 QEYKQ 264
>gi|301107059|ref|XP_002902612.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098486|gb|EEY56538.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 243
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 24/195 (12%)
Query: 63 STESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCR 122
ST + P Y +++S+ + + VF+ +G++++EG +KN + + Y K+C+
Sbjct: 60 STLEDDIPTEYRVEISETPLKLKVFSLDGSGRMAIEGTVKNSCTIMAQRND--QYSKMCK 117
Query: 123 ERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEV----------- 171
+R K M K+R +Q +++ +P + + +KP P+ E
Sbjct: 118 QRLIKSMVKTRIVQPLED--------LPRVKKARIQFTIEKPDPEAEEDDADAKLLDKSD 169
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K+ + + E+++++F FE + W L++L QPE LK++LK++CVY+ KG N+ Y
Sbjct: 170 KKIKMSKDELKNLVFHHFEEREYWPLKELNYHCRQPESLLKEVLKEICVYHRKGPNKSCY 229
Query: 232 ELKPEYKKAADGPAS 246
ELKP+YK DG +S
Sbjct: 230 ELKPQYK---DGVSS 241
>gi|412985430|emb|CCO18876.1| predicted protein [Bathycoccus prasinos]
Length = 376
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 38/265 (14%)
Query: 2 WLMKCPALVSRSLKIPS-----SDNDDDDSARPV----------AKVILSIDPL-QSNED 45
WL+K P V R+ K S +DN++D+ + KV + IDP + N++
Sbjct: 116 WLVKVPNFVDRAWKSFSDRRSKADNENDEDGMDIDAELNDNDELGKVRVVIDPFDKENKE 175
Query: 46 SSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKIS--------- 96
+ + + +++ E P +Y M + + + VF+E+ G +
Sbjct: 176 AFAVTLNAAVN------EDEEHEIPVKYIMTENIEAPEIHVFSETREGTAAATSAMDVNE 229
Query: 97 --VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMI 154
VE K+ K DMRP + Y ++ + R K +KSR +Q + + + + P+P
Sbjct: 230 FIVEAKVHKKLDMRPKDASDAAYARVSKNRLEKAQSKSRFVQSVVGADAARIAPLPKRSN 289
Query: 155 STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDM 214
+ +PK ++ ++ ++ D +F LFER++ W+L+QL++ET QP L++
Sbjct: 290 LVRLADGGVTKPKAEKM-----EKAQLTDKLFGLFERRTFWSLKQLLEETKQPAMHLRET 344
Query: 215 LKDLCVYNNKGSNQGSYELKPEYKK 239
++++ +G N G Y LK Y++
Sbjct: 345 VQEIANLARRGPNNGMYSLKDIYRQ 369
>gi|281210350|gb|EFA84517.1| TFIIF subunit [Polysphondylium pallidum PN500]
Length = 258
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 3/161 (1%)
Query: 83 PMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDN 142
P+ +F+E + +S EG I + D+R + Y +L + RT Y TK+RQ + I+ ++
Sbjct: 88 PIKIFSEDTENALSFEGSIGLRCDVRMDLSS-PAYRELMKSRTTSYNTKTRQSKTIEAND 146
Query: 143 GSHMRPMPG--MMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQL 200
S + + I+ T KP+ K E KR R ++ D++FK F + W L+ L
Sbjct: 147 RSQLHRVYSNPAKIAVSTTVYTKPKGKSQEDKRERMQEEDLIDLIFKAFGEKQYWLLKDL 206
Query: 201 IQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
+ TDQP+ +LK L+ +C + +GS++ SYE+KPEYK +
Sbjct: 207 VAYTDQPQVWLKQTLEKICTLHKRGSHRNSYEIKPEYKTST 247
>gi|348681790|gb|EGZ21606.1| hypothetical protein PHYSODRAFT_354403 [Phytophthora sojae]
Length = 249
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 24/195 (12%)
Query: 63 STESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCR 122
ST + P Y +++S+ + + VF+ +G++++EG +KN + + Y K+C+
Sbjct: 66 STLEDDIPTEYRIEISETPLKLKVFSLDGSGRMAIEGTVKNSCTVMAQRND--QYSKMCK 123
Query: 123 ERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEV----------- 171
+R K M K+R +Q +++ +P + + +KP + E
Sbjct: 124 QRLIKSMVKTRIVQPLED--------LPRVKKARIQFTIEKPDAENEEDDADSKLLDKSD 175
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K+ + + E+++++F FE + W L++L QPE FLK++LK++CVY+ KG N+ Y
Sbjct: 176 KKIKMSKDELKNLVFHHFEEREYWPLKELNYHCRQPESFLKEVLKEICVYHRKGPNKSCY 235
Query: 232 ELKPEYKKAADGPAS 246
ELKP+YK DG +S
Sbjct: 236 ELKPQYK---DGVSS 247
>gi|328874575|gb|EGG22940.1| TFIIF subunit [Dictyostelium fasciculatum]
Length = 243
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
Query: 83 PMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDN 142
P+ +F+E +++EG + K D+R + ++ + Y +LCR R+ Y TK+RQ + ++
Sbjct: 80 PLKIFSEDKENALALEGSVGLKCDIRMNVDS-KGYRELCRGRSESYNTKTRQSKTLEGHQ 138
Query: 143 GSHMR---PMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQ 199
S + P+ + + K K Q E KR R E+ D++F LFE ++ W L+
Sbjct: 139 TSIFKNHNPIKPTVSTLAAVMKTKKQ----EDKRERMAEDELVDLLFHLFEEKTYWDLKS 194
Query: 200 LIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
LI T+QP+ +LK +L+ +C+ N +G ++ YE+K EYK
Sbjct: 195 LISRTEQPQAWLKQVLERICILNKRGPHRNYYEIKSEYK 233
>gi|260800648|ref|XP_002595210.1| hypothetical protein BRAFLDRAFT_100378 [Branchiostoma floridae]
gi|229280454|gb|EEN51222.1| hypothetical protein BRAFLDRAFT_100378 [Branchiostoma floridae]
Length = 249
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 1 MWLMKCPALVSR-----------SLKIPSSDNDDDDSARPVAKVILSI--DPLQSNEDSS 47
+WL+K P +S +LKI + P +VI S+ D Q ++
Sbjct: 17 LWLVKVPKYMSNKWMTVEDGEVGTLKI------NRRPGAPKPEVIFSLKEDLAQRDDGKG 70
Query: 48 SSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDM 107
+S + +F + SG A + PM VF+++S G +++EGK+ ++ D
Sbjct: 71 NSEAPREHKFVL------SGTAGQ-----------PMGVFSQTSTGALALEGKVAHRVDC 113
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP E+Y KL R + MT R +D ++ +P+ + +KK
Sbjct: 114 RP--VGGEHYMKLKRLQVLDAMTPMRTTMALDRAVTNNYKPVANHANNLEIERRKK---- 167
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
+ KR R D ++++++F FE+ + ++ L++ T QP Q+LK++LK++ YN K +
Sbjct: 168 -EDGKRARADPEKVQEMLFSAFEKHQYYNIKDLVEITKQPIQYLKEVLKEIATYNLKAPH 226
Query: 228 QGSYELKPEYKKAADG 243
+ ++ELKPEY+ G
Sbjct: 227 KNTWELKPEYRHYKGG 242
>gi|145357023|ref|XP_001422722.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582965|gb|ABP01039.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 241
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 2 WLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTMEL 61
WL+K P VSR S + +A + ++ + + T MEL
Sbjct: 11 WLVKVPKFVSRVFH-----EAAAASKQAMADDDDMDTDTKEEDEPAIGTVRHMTHAIMEL 65
Query: 62 ISTESGNAPKRYSMDMSKDLIPMSVFAESSNGK------ISVEGKIKNKFDMRPHHENME 115
E+ PK+Y + +PM VF++ G I++E K+ K DMRP +
Sbjct: 66 TGKEANGVPKQYILANQPSDMPMRVFSDVREGTTSGQADITLEAKVDLKLDMRPTSIDDV 125
Query: 116 NYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR--PMPGMMISTGFTEKKKPQPKGSEVKR 173
+Y ++ ++R + TK+R Q + S MR P+P FT+ + K+
Sbjct: 126 DYHRVSKDRMIQAQTKTRVTQ-----SSSEMRFAPLPKARNLIRFTDAAS----NKKEKK 176
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
R ++ +E+++F LFERQ W+L+QLI ET QP +LK L ++ + +G N G + L
Sbjct: 177 ERMEKKALENVLFGLFERQPYWSLKQLILETKQPVDWLKTNLGEIALLTRRGPNMGLWGL 236
Query: 234 KPEYK 238
KPE+K
Sbjct: 237 KPEWK 241
>gi|297720443|ref|NP_001172583.1| Os01g0772200 [Oryza sativa Japonica Group]
gi|255673728|dbj|BAH91313.1| Os01g0772200 [Oryza sativa Japonica Group]
Length = 138
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 24/126 (19%)
Query: 1 MWLMKCPALVSRSLK----------------IPSSDNDDDDSARPVAKVILSIDPLQSNE 44
+WLMKCP +VSR+ + ++ N + + VAKVI+S+DPL+S +
Sbjct: 17 VWLMKCPTVVSRAWQEAATAAASSSSSSDAAAGANSNSNANPNPVVAKVIVSLDPLRSED 76
Query: 45 DSSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNK 104
+F ME+ T +GN PK YS++M KD +PM VF+ES+ GK+S EGK+ +K
Sbjct: 77 QQ--------LQFKMEMAQTGNGNTPKSYSLNMFKDFVPMCVFSESNQGKLSCEGKVGHK 128
Query: 105 FDMRPH 110
FDM PH
Sbjct: 129 FDMEPH 134
>gi|325179553|emb|CCA13951.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 330
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 95/180 (52%), Gaps = 20/180 (11%)
Query: 69 APKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKY 128
P Y +++ + + VF++ +G++++EG + N + + Y K+C++R +
Sbjct: 117 VPTEYRIEIGPTPLKLKVFSQDGSGRMAIEGTVSNSCTIIAQRND--QYSKMCKQRLLRS 174
Query: 129 MTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEV----------KRTRRDR 178
M K+R +Q +++ +P + + KP P E K+ + +
Sbjct: 175 MVKTRIVQPLED--------LPRVKKARIQFTIDKPDPDTEEAIESKISERLDKKVKMSK 226
Query: 179 GEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
E++D++F F+ + W L++L QPE FLK++LK++CVY+ KG N+ YELKP+YK
Sbjct: 227 DELKDLVFHHFDERDFWPLKELNSHCRQPESFLKEVLKEICVYHRKGPNKSCYELKPQYK 286
>gi|325179554|emb|CCA13952.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 329
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 95/180 (52%), Gaps = 20/180 (11%)
Query: 69 APKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKY 128
P Y +++ + + VF++ +G++++EG + N + + Y K+C++R +
Sbjct: 116 VPTEYRIEIGPTPLKLKVFSQDGSGRMAIEGTVSNSCTIIAQRND--QYSKMCKQRLLRS 173
Query: 129 MTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEV----------KRTRRDR 178
M K+R +Q +++ +P + + KP P E K+ + +
Sbjct: 174 MVKTRIVQPLED--------LPRVKKARIQFTIDKPDPDTEEAIESKISERLDKKVKMSK 225
Query: 179 GEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
E++D++F F+ + W L++L QPE FLK++LK++CVY+ KG N+ YELKP+YK
Sbjct: 226 DELKDLVFHHFDERDFWPLKELNSHCRQPESFLKEVLKEICVYHRKGPNKSCYELKPQYK 285
>gi|328767698|gb|EGF77747.1| hypothetical protein BATDEDRAFT_20656 [Batrachochytrium
dendrobatidis JAM81]
Length = 299
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
Query: 66 SGNAPKRYSMDMSKDLIPMS--VFAESSNGK-ISVEGKIKNKFDMRP---HHENMENYGK 119
S + PK Y++ + +L P + VF E+S G+ + + G ++++ + P + +Y +
Sbjct: 96 SADLPKNYNLKFT-NLAPKNEYVFTETSQGRAVGIAGIVQHEATVSPMVTDATHSAHYQR 154
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST---GFTEKKKPQPKGSEVKRTRR 176
+ ++RT T SR +++ID + H R M T G K+ + S KR R
Sbjct: 155 IMKKRTTTAATPSRVVKMIDENKTEHRRLMGSASSDTWNAGLEHIKQKKSSKSLDKRERM 214
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
R ++ +++F LF W + L+++T QP +LK++L ++C+ N +G G Y+LKPE
Sbjct: 215 TRSDLLNVLFPLFSGYPYWNFKGLVEQTKQPHAWLKEILAEVCILNKRGPYTGMYQLKPE 274
Query: 237 YKKAADGPAS 246
+ P++
Sbjct: 275 FVLGGQKPSN 284
>gi|255585871|ref|XP_002533610.1| conserved hypothetical protein [Ricinus communis]
gi|223526511|gb|EEF28779.1| conserved hypothetical protein [Ricinus communis]
Length = 60
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 49/55 (89%)
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKG 225
+KRTRRDRGE+EDIMFKLFERQ NW L+QL+QETDQP QFLK++L +L VYN +G
Sbjct: 1 MKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELYVYNKRG 55
>gi|363729437|ref|XP_003640649.1| PREDICTED: general transcription factor IIF subunit 2 isoform 1
[Gallus gallus]
Length = 249
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS K+S+EG + + + RP ENY KL R + + R Q +D
Sbjct: 93 LTVFTESSTDKLSLEGIVVQRAECRPAAS--ENYMKLKRFQIEESSKPVRLSQQLDKAVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + +KKK + KR R D+ ++ D++F FE+ + ++ L+
Sbjct: 151 TNYKPVANHQYNIEYEKKKK-----EDGKRARADKQQVLDMLFSAFEKHQYYNIKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++L+++ +YN KG+++ ++ELKPEY+
Sbjct: 206 TKQPVIYLKEILREIGIYNVKGTHKNTWELKPEYR 240
>gi|126337679|ref|XP_001363893.1| PREDICTED: general transcription factor IIF subunit 2-like
[Monodelphis domestica]
Length = 249
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 91/155 (58%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKAVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + +KKK + KR R D+ ++ D++F FE+ + ++ L+
Sbjct: 151 TNFKPVANHQNNIEYEKKKK-----EDGKRARADKQQVLDMLFSAFEKHQYYNIKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++L+++ +YN KG+++ ++ELKPEY+
Sbjct: 206 TKQPVIYLKEILREIGIYNVKGTHKNTWELKPEYR 240
>gi|440905270|gb|ELR55673.1| General transcription factor IIF subunit 2, partial [Bos grunniens
mutus]
Length = 227
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 71 LTVFTESSSDKLSLEGIVVQRAECRP--AANENYMRLKRLQIEESSKPVRLSQQLDKVVT 128
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 129 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 183
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LKD+LK++ V N KG ++ ++ELKPEY+
Sbjct: 184 TKQPVSYLKDILKEIGVQNVKGIHKNTWELKPEYR 218
>gi|255087202|ref|XP_002505524.1| predicted protein [Micromonas sp. RCC299]
gi|226520794|gb|ACO66782.1| predicted protein [Micromonas sp. RCC299]
Length = 417
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 118/287 (41%), Gaps = 61/287 (21%)
Query: 2 WLMKCPALVSRSLKIPSS----------------DNDDDDSARPVAKVILSIDPLQSNED 45
WL+K PA V+R+ + S D D + ++ +++DP E
Sbjct: 140 WLVKVPAFVTRAWRAASDALDEVSELDGGVGTEIDGGKVDDKELLGRMRMTVDPFAPPEK 199
Query: 46 SSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAE---------------- 89
T+E + + PK Y M M+ D P+ VF++
Sbjct: 200 RQRHF------LTLEDNVSAANRIPKEYDMVMTPDDQPIHVFSDVRENTAAAAARAAARL 253
Query: 90 ----------SSNGKISV-------EGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKS 132
S ++S+ EG + KFD+RP E Y R + K+
Sbjct: 254 AAERALAGRGSGENQLSLPHDEFVLEGAVSEKFDVRPASVTDEAYRATHLRRIEEATKKT 313
Query: 133 RQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQ 192
R + D P+P T + K+ + +E R ++ +ED + LFERQ
Sbjct: 314 RVMG--DVKGPQRTVPLPKARNITQRLDGKEDVKEKAE----RLEKPLLEDRLMGLFERQ 367
Query: 193 SNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
S W+ +QL+ ET QP +LK++L +L V N +G N G Y LK EY++
Sbjct: 368 SLWSFKQLVAETRQPAVWLKEVLTELAVLNRRGPNTGMYVLKEEYRR 414
>gi|330806103|ref|XP_003291013.1| hypothetical protein DICPUDRAFT_38380 [Dictyostelium purpureum]
gi|325078810|gb|EGC32441.1| hypothetical protein DICPUDRAFT_38380 [Dictyostelium purpureum]
Length = 256
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 43/256 (16%)
Query: 1 MWLMKCPALVSRSL---------KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSS 51
+WL+K P +S KI D+ + + K+ LSI L N + +S
Sbjct: 21 VWLIKVPKFLSEHWNGIGKGEIGKIHIKGGDNVNFYFYIIKITLSISGLSENNEFQLMTS 80
Query: 52 SSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHH 111
+++ + T+ P+ +F+E S+G +++EG I + D++
Sbjct: 81 ANN-------LETQ-----------------PLKIFSEDSDGSLALEGNIGLRCDIKIDV 116
Query: 112 ENMENYGKLCRERTNKYMTKSRQIQVIDND---NGSHMRPMPGMMISTGFTEKKKPQPKG 168
++ +Y +L + R KY TK+R +VID+ + P + +TG ++K
Sbjct: 117 QS-SSYRELMKTRHTKYNTKTRMTKVIDDKELFTPAIFNPNRVQVSTTGLGKRKTTD--- 172
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
K+ + E+ D++F F +S W L+ L ET QP+ +LK +L+ +C+ N +G++
Sbjct: 173 ---KKEKLPEDEVIDLIFDAFRNKSYWDLKGLEAETGQPKGYLKQVLEKVCILNKRGAHN 229
Query: 229 GSYELKPEYKKAADGP 244
YELK E+K + P
Sbjct: 230 HLYELKSEFKDKENPP 245
>gi|84000109|ref|NP_001033153.1| general transcription factor IIF subunit 2 [Bos taurus]
gi|426236297|ref|XP_004012106.1| PREDICTED: general transcription factor IIF subunit 2 [Ovis aries]
gi|118573901|sp|Q2T9L9.1|T2FB_BOVIN RecName: Full=General transcription factor IIF subunit 2; AltName:
Full=ATP-dependent helicase GTF2F2; AltName:
Full=Transcription initiation factor IIF subunit beta;
Short=TFIIF-beta
gi|83405774|gb|AAI11361.1| General transcription factor IIF, polypeptide 2, 30kDa [Bos taurus]
gi|296481803|tpg|DAA23918.1| TPA: general transcription factor IIF subunit 2 [Bos taurus]
Length = 249
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRPAAN--ENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LKD+LK++ V N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVSYLKDILKEIGVQNVKGIHKNTWELKPEYR 240
>gi|355693889|gb|AER99486.1| proteinral transcription factor IIF, polypeptide 2, 30kDa [Mustela
putorius furo]
Length = 201
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 49 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 106
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 107 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 161
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ V N KG+++ ++ELKPEY+
Sbjct: 162 TKQPVGYLKEILKEIGVQNVKGTHKNTWELKPEYR 196
>gi|301758318|ref|XP_002915010.1| PREDICTED: general transcription factor IIF subunit 2-like
[Ailuropoda melanoleuca]
gi|345788533|ref|XP_851466.2| PREDICTED: general transcription factor IIF subunit 2 [Canis lupus
familiaris]
gi|410947437|ref|XP_003980453.1| PREDICTED: general transcription factor IIF subunit 2 [Felis catus]
Length = 249
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ V N KG+++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGVQNVKGTHKNTWELKPEYR 240
>gi|45360629|ref|NP_988987.1| general transcription factor IIF, polypeptide 2, 30kDa [Xenopus
(Silurana) tropicalis]
gi|38174399|gb|AAH61312.1| general transcription factor 2F, polypeptide 2, 30kDa [Xenopus
(Silurana) tropicalis]
Length = 264
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 94/167 (56%), Gaps = 19/167 (11%)
Query: 84 MSVFAESSNG------------KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTK 131
++VF ES +G K+++EG + ++ + RP ENY ++ R++ +
Sbjct: 96 LTVFTESLSGQSDDKSENRVIDKLALEGIVVHRAECRP--AASENYMQMKRKQIEESSKP 153
Query: 132 SRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFER 191
RQ Q I+ ++ RP+ + + +KKK + KR R D+ ++ D++F FE+
Sbjct: 154 KRQSQQIEKAVTTNYRPVSNHQYNIEYEKKKK-----DDGKRARADKHQVLDMLFSAFEK 208
Query: 192 QSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ ++ L+ T QP +LK++L+D+ +YN KG+++ ++ELKPEY+
Sbjct: 209 HQYYNIKDLVDITKQPVSYLKEILRDIGIYNMKGTHKNTWELKPEYR 255
>gi|449484507|ref|XP_004175135.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIF
subunit 2 [Taeniopygia guttata]
Length = 307
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF E+S K+++EG + + + RP NY KL R + + R Q +D
Sbjct: 151 LTVFTETSVDKLALEGIVVQRAECRPAASX--NYMKLKRLQIEESSKPVRLSQQLDKAVT 208
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + +KKK + KR R D+ ++ D++F FE+ + ++ L+
Sbjct: 209 TNYKPVANHQYNIEYEKKKK-----EDGKRARADKQQVLDMLFSAFEKHQYYNIKDLVDI 263
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++L+++ +YN KG+++ ++ELKPEY+
Sbjct: 264 TKQPVIYLKEILREIGIYNVKGTHKNTWELKPEYR 298
>gi|164448676|ref|NP_001096603.1| general transcription factor IIF, polypeptide 2a isoform 2 [Danio
rerio]
gi|156230595|gb|AAI52268.1| MGC174761 protein [Danio rerio]
Length = 249
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 124/241 (51%), Gaps = 21/241 (8%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +S+ + + V K L I Q + S + + T T+E
Sbjct: 18 VWLVKVPKYLSQQWTKATGRGE-------VGK--LRISKNQGKAEVSFTLNEELT--TIE 66
Query: 61 LISTESG--NAPKRYSMDM-SKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENY 117
I ++ AP+ + + + ++VF E+S+ KI++EG + + + RP E+Y
Sbjct: 67 TIGEKTSMVRAPREHPFTLQTVGGQTLAVFTENSSDKIALEGVVVQRAECRP--AVSESY 124
Query: 118 GKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRD 177
+L + + + R Q +D ++ +P+ + + ++KK E KR R D
Sbjct: 125 MRLKKLQIEELSKPLRFSQQLDKAVTTNYKPVANHAYNLDYEKRKK-----EEGKRARAD 179
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
+ ++ D++F FE+ + ++ L+ T QP +LK++L+D+ +YN KG+++ ++ELKPEY
Sbjct: 180 KQQVLDMLFSAFEKHQFYNIKDLVDITKQPVIYLKEILRDIGIYNVKGTHKNTWELKPEY 239
Query: 238 K 238
+
Sbjct: 240 R 240
>gi|39930425|ref|NP_081092.1| general transcription factor IIF subunit 2 [Mus musculus]
gi|62901035|sp|Q8R0A0.1|T2FB_MOUSE RecName: Full=General transcription factor IIF subunit 2; AltName:
Full=ATP-dependent helicase GTF2F2; AltName:
Full=Transcription initiation factor IIF subunit beta;
Short=TFIIF-beta
gi|20072603|gb|AAH27173.1| General transcription factor IIF, polypeptide 2 [Mus musculus]
gi|74201290|dbj|BAE26104.1| unnamed protein product [Mus musculus]
gi|148703868|gb|EDL35815.1| general transcription factor IIF, polypeptide 2, isoform CRA_c [Mus
musculus]
Length = 249
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY KL R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMKLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|31542922|ref|NP_112304.2| general transcription factor IIF subunit 2 [Rattus norvegicus]
gi|220891|dbj|BAA01516.1| RAP30 [Rattus norvegicus]
gi|60552080|gb|AAH91112.1| General transcription factor IIF, polypeptide 2 [Rattus norvegicus]
gi|149049981|gb|EDM02305.1| general transcription factor IIF, polypeptide 2, isoform CRA_b
[Rattus norvegicus]
Length = 249
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY KL R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMKLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|417397839|gb|JAA45953.1| Putative proteinral transcription factor iif polypeptide 2 30kda
[Desmodus rotundus]
Length = 249
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ RP+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYRPVANHQYNIEYERKKK-----EDGKRARADKQYVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|296203835|ref|XP_002749072.1| PREDICTED: general transcription factor IIF subunit 2 [Callithrix
jacchus]
gi|403286252|ref|XP_003934413.1| PREDICTED: general transcription factor IIF subunit 2 [Saimiri
boliviensis boliviensis]
Length = 249
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ V N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYR 240
>gi|62901918|gb|AAY18910.1| RAP30 [synthetic construct]
Length = 273
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 117 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 174
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 175 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 229
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ V N KG ++ ++ELKPEY+
Sbjct: 230 TKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYR 264
>gi|4758488|ref|NP_004119.1| general transcription factor IIF subunit 2 [Homo sapiens]
gi|114651459|ref|XP_001154142.1| PREDICTED: uncharacterized protein LOC741868 [Pan troglodytes]
gi|297693990|ref|XP_002824282.1| PREDICTED: general transcription factor IIF subunit 2 [Pongo
abelii]
gi|397472363|ref|XP_003807716.1| PREDICTED: general transcription factor IIF subunit 2 [Pan
paniscus]
gi|426375361|ref|XP_004054510.1| PREDICTED: general transcription factor IIF subunit 2 [Gorilla
gorilla gorilla]
gi|464519|sp|P13984.2|T2FB_HUMAN RecName: Full=General transcription factor IIF subunit 2; AltName:
Full=ATP-dependent helicase GTF2F2; AltName:
Full=General transcription factor IIF 30 kDa subunit;
AltName: Full=Transcription initiation factor IIF
subunit beta; Short=TFIIF-beta; AltName:
Full=Transcription initiation factor RAP30
gi|35865|emb|CAA34775.1| 30kb subunit of RAB30 /74 [Homo sapiens]
gi|35867|emb|CAA42419.1| RAP30 [Homo sapiens]
gi|12804689|gb|AAH01771.1| General transcription factor IIF, polypeptide 2, 30kDa [Homo
sapiens]
gi|54695920|gb|AAV38332.1| general transcription factor IIF, polypeptide 2, 30kDa [Homo
sapiens]
gi|61356697|gb|AAX41274.1| general transcription factor IIF polypeptide 2 [synthetic
construct]
gi|119629133|gb|EAX08728.1| general transcription factor IIF, polypeptide 2, 30kDa, isoform
CRA_c [Homo sapiens]
gi|119629134|gb|EAX08729.1| general transcription factor IIF, polypeptide 2, 30kDa, isoform
CRA_c [Homo sapiens]
gi|158256522|dbj|BAF84234.1| unnamed protein product [Homo sapiens]
gi|190689903|gb|ACE86726.1| general transcription factor IIF, polypeptide 2, 30kDa protein
[synthetic construct]
gi|190691275|gb|ACE87412.1| general transcription factor IIF, polypeptide 2, 30kDa protein
[synthetic construct]
gi|261859240|dbj|BAI46142.1| general transcription factor IIF, polypeptide 2, 30kDa [synthetic
construct]
gi|410217096|gb|JAA05767.1| general transcription factor IIF, polypeptide 2, 30kDa [Pan
troglodytes]
gi|410248632|gb|JAA12283.1| general transcription factor IIF, polypeptide 2, 30kDa [Pan
troglodytes]
gi|410288620|gb|JAA22910.1| general transcription factor IIF, polypeptide 2, 30kDa [Pan
troglodytes]
gi|410336085|gb|JAA36989.1| general transcription factor IIF, polypeptide 2, 30kDa [Pan
troglodytes]
Length = 249
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ V N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYR 240
>gi|194902220|ref|XP_001980647.1| GG17267 [Drosophila erecta]
gi|190652350|gb|EDV49605.1| GG17267 [Drosophila erecta]
Length = 277
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPEEKIPTEHV 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + + K S S A+ N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPSDGKENST---------SSAAQPDNEKLYMEGRIVQKLECR 135
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 136 PIADNC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 187
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 188 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 247
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 248 NMWELKKEYR 257
>gi|291392998|ref|XP_002713006.1| PREDICTED: general transcription factor IIF, polypeptide 2, 30kDa
[Oryctolagus cuniculus]
Length = 249
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKIVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ ++ D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQQVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|344281782|ref|XP_003412656.1| PREDICTED: general transcription factor IIF subunit 2-like
[Loxodonta africana]
Length = 249
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++L+++ + N KG+++ ++ELKPEY+
Sbjct: 206 TKQPVVYLKEILREIGIQNVKGTHKNTWELKPEYR 240
>gi|349605491|gb|AEQ00709.1| General transcription factor IIF subunit 2-like protein, partial
[Equus caballus]
Length = 231
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 75 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 132
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 133 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 187
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 188 TKQPVLYLKEILKEIGIQNVKGIHKNTWELKPEYR 222
>gi|395834851|ref|XP_003790402.1| PREDICTED: general transcription factor IIF subunit 2 [Otolemur
garnettii]
Length = 249
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSTDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ V N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGVQNVKGIHKNTWELKPEYR 240
>gi|354476267|ref|XP_003500346.1| PREDICTED: general transcription factor IIF subunit 2-like
[Cricetulus griseus]
gi|344240972|gb|EGV97075.1| General transcription factor IIF subunit 2 [Cricetulus griseus]
Length = 249
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|149730248|ref|XP_001491541.1| PREDICTED: general transcription factor IIF subunit 2-like [Equus
caballus]
Length = 249
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVLYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|388454665|ref|NP_001253640.1| general transcription factor IIF subunit 2 [Macaca mulatta]
gi|402901916|ref|XP_003913880.1| PREDICTED: general transcription factor IIF subunit 2 [Papio
anubis]
gi|380786557|gb|AFE65154.1| general transcription factor IIF subunit 2 [Macaca mulatta]
gi|383413475|gb|AFH29951.1| general transcription factor IIF subunit 2 [Macaca mulatta]
gi|384946658|gb|AFI36934.1| general transcription factor IIF subunit 2 [Macaca mulatta]
Length = 249
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 13/158 (8%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCR---ERTNKYMTKSRQIQVIDN 140
++VF ESS+ K+S+EG + + + RP ENY +L R E ++K + S+Q++ +
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLEKVVT 150
Query: 141 DNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQL 200
N +P+ + + KKK + KR R D+ + D++F FE+ + L+ L
Sbjct: 151 TN---YKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDL 202
Query: 201 IQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ T QP +LK++LK++ V N KG ++ ++ELKPEY+
Sbjct: 203 VDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYR 240
>gi|400922|sp|Q01750.1|T2FB_RAT RecName: Full=General transcription factor IIF subunit 2; AltName:
Full=ATP-dependent helicase GTF2F2; AltName:
Full=Transcription initiation factor IIF subunit beta;
Short=TFIIF-beta; AltName: Full=Transcription initiation
factor RAP30
gi|206551|gb|AAA42005.1| helicase [Rattus norvegicus]
Length = 249
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY KL R + + R Q D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMKLKRLQIEESSKPVRLSQQADKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|19111874|ref|NP_595082.1| transcription factor TFIIF complex beta subunit Tfg2 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582884|sp|O94424.1|T2FB_SCHPO RecName: Full=Transcription initiation factor IIF subunit beta;
AltName: Full=ATP-dependent helicase TFG2; AltName:
Full=TFIIF medium subunit; AltName: Full=TFIIF-beta
gi|7801320|emb|CAB91188.1| transcription factor TFIIF complex beta subunit Tfg2 (predicted)
[Schizosaccharomyces pombe]
Length = 307
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 63 STESGNAPKRYSMDMSKDLIPMS-VFAES----SNGKISVEGKIKNKFDMRPHHENMENY 117
S E+ + PK Y++ + + S VF ES S ++ G + ++ ++ P ++Y
Sbjct: 73 SPENADVPKIYNLRVMNKFVRNSYVFRESETSSSMKSTALVGTVAHECNVSPVIN--DDY 130
Query: 118 GKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIS-----TGFTEKKKPQPKGSEVK 172
++ ++R R++Q+ID+ GS + PG + S T F KP+ G +K
Sbjct: 131 RRVMQKRALAASAPKRKVQMIDDRGGSLL--APGTLGSRSRSTTSFIRNVKPR-TGEGLK 187
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
+R R E+ DI+FK FE WTL+ L + QPE +LK++L + + N +G Y
Sbjct: 188 NSRIPRNELLDILFKCFEDYEYWTLKGLREYVKQPEVYLKEVLDSIAILNKRGPYALKYS 247
Query: 233 LKPEYKKAADG 243
LKPEYK D
Sbjct: 248 LKPEYKGTMDA 258
>gi|348583519|ref|XP_003477520.1| PREDICTED: general transcription factor IIF subunit 2-like [Cavia
porcellus]
Length = 249
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|343791023|ref|NP_001230557.1| general transcription factor IIF, polypeptide 2, 30kDa [Sus scrofa]
Length = 249
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQYVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 206 TKQPVSYLKEILKEIGIQNVKGIHKNTWELKPEYR 240
>gi|24645751|ref|NP_524305.2| transcription factor TFIIFbeta [Drosophila melanogaster]
gi|1729817|sp|P41900.2|T2FB_DROME RecName: Full=General transcription factor IIF subunit 2; AltName:
Full=ATP-dependent helicase TfIIF-beta; AltName:
Full=Transcription initiation factor IIF subunit beta;
Short=TFIIF-beta
gi|806871|gb|AAA86888.1| initiation factor TFIIF small subunit [Drosophila melanogaster]
gi|7299356|gb|AAF54548.1| transcription factor TFIIFbeta [Drosophila melanogaster]
gi|17946191|gb|AAL49136.1| RE56801p [Drosophila melanogaster]
gi|220942436|gb|ACL83761.1| TfIIFbeta-PA [synthetic construct]
gi|220952660|gb|ACL88873.1| TfIIFbeta-PA [synthetic construct]
Length = 277
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPEEKIPTEHI 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + + K S + A+ N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPSDGKENSTTSA---------AQPDNEKLYMEGRIVQKLECR 135
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 136 PIADNC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 187
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 188 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 247
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 248 NMWELKKEYR 257
>gi|449662180|ref|XP_002160344.2| PREDICTED: general transcription factor IIF subunit 2-like [Hydra
magnipapillata]
Length = 265
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 70 PKRYSMDMSKDLIPMSVFAESS----------NGKISVEGKIKNKFDMRPHHENMENYGK 119
P ++ +MS VF+E+S KI+ EGKI + D RP + NY +
Sbjct: 82 PSKHKFEMSDIWQTFGVFSETSCDDEDANEQAREKIAFEGKIIKRADCRPIED--PNYMQ 139
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRG 179
+ R+ K RQ++ I + +P+ I+ +K+K E KR R +R
Sbjct: 140 MKRKAIEKACRPVRQVKQITGLVTT-FKPVNDHQINMEPIKKRK-----EEGKRVRAERD 193
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
E+ +++F FE+ +TL+ L+ T QP LK +L+D+C YN K ++ +YELKPEY+
Sbjct: 194 EVLEVLFSAFEKHQFYTLKDLVGITQQPVVHLKAILRDVCNYNLKNPHKNTYELKPEYR 252
>gi|170096937|ref|XP_001879688.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645091|gb|EDR09339.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 351
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 43/279 (15%)
Query: 1 MWLMKCPA-LVSRSLKIPSSD----------NDDDDSARPVAKVILSIDPLQSNEDSSSS 49
+WL+K P L+ R + D N+D + RP + L + + ++
Sbjct: 39 VWLVKIPKFLMERWASVNVEDAHLATLRVYTNNDPTTGRPRIILFLPPNINPNTPNAPLP 98
Query: 50 SSSSSTRFTMELISTESGNAPKRYSMDMSKDLI-------------PMSVFAESSNGKIS 96
+ + F +G P Y +DM D + +SV ++ ++
Sbjct: 99 YNPNRPLFQTTTYYPTTGAEPDCYELDMVHDNVENQIVVAERPKDPSLSVSTSAAAATVN 158
Query: 97 -------VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDN-----GS 144
+ G+IK++ ++RP + Y K +ER KY T RQI++I++ G
Sbjct: 159 SRARTTVLTGRIKHECNLRPAFS--QTYRKQMKERHKKYNTPVRQIRMIEDAGVPGGRGG 216
Query: 145 HMRPMPGMMISTG-----FTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQ 199
R G+ + G + K QPKG+ + R R ++ D +F LF +W +R
Sbjct: 217 VNRLSSGVGVGAGAAFGDLIKVKPKQPKGTFERMARMPRNQLLDQIFSLFRETPHWGIRP 276
Query: 200 LIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L ++T QPE +LK++L ++ + G + G +ELK YK
Sbjct: 277 LREKTQQPEAYLKEVLSEVAFLHRSGEHSGFFELKENYK 315
>gi|194741034|ref|XP_001952994.1| GF17437 [Drosophila ananassae]
gi|190626053|gb|EDV41577.1| GF17437 [Drosophila ananassae]
Length = 281
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 25/250 (10%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPSNMDVGKLRISKTPGQKAQVSLSLTPAVLALDPEEKIPTEHV 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S S + M + + A S N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMS-----QAEMAANNGKENSTAPALSDNEKLYMEGRIVQKLECR 139
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 140 PIADNC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 191
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 192 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 251
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 252 NMWELKKEYR 261
>gi|195571933|ref|XP_002103955.1| GD20705 [Drosophila simulans]
gi|194199882|gb|EDX13458.1| GD20705 [Drosophila simulans]
Length = 277
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPDEKIPTEHI 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + + K S + A+ N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPSDGKENSTTST---------AQPDNEKLYMEGRIVQKLECR 135
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 136 PIADNC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 187
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 188 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 247
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 248 NMWELKKEYR 257
>gi|195499852|ref|XP_002097123.1| GE24669 [Drosophila yakuba]
gi|194183224|gb|EDW96835.1| GE24669 [Drosophila yakuba]
Length = 277
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPEEKIPTEHV 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + + K S S ++ N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPSDGKENST---------SSASQPDNEKLYMEGRIVQKLECR 135
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 136 PIADNC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 187
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 188 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 247
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 248 NMWELKKEYR 257
>gi|195330041|ref|XP_002031717.1| GM26151 [Drosophila sechellia]
gi|194120660|gb|EDW42703.1| GM26151 [Drosophila sechellia]
Length = 277
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTTAVLALDPDEKIPTEHI 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + + K S + A+ N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPSDGKENSTTST---------AQPDNEKLYMEGRIVQKLECR 135
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 136 PIADNC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 187
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 188 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 247
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 248 NMWELKKEYR 257
>gi|213410311|ref|XP_002175925.1| transcription initiation factor IIF subunit beta
[Schizosaccharomyces japonicus yFS275]
gi|212003972|gb|EEB09632.1| transcription initiation factor IIF subunit beta
[Schizosaccharomyces japonicus yFS275]
Length = 298
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 63 STESGNAPKRYSMD-MSKDLIPMSVFAE----SSNGKISVEGKIKNKFDMRPHHENMENY 117
S E+ + PK Y++ M+K + VF E S + + ++ G + ++ ++ P ++Y
Sbjct: 70 SAENMDVPKEYNLKVMNKYVRNSYVFREFEQPSGSKQTALVGTVAHECNVSPVIN--DDY 127
Query: 118 GKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM-----ISTGFTEKKKPQPKGSEVK 172
++ +R R++Q+ID+ GS + PG + +T F KP+ G +K
Sbjct: 128 RRVMHKRALAASAPRRRVQMIDDRGGSLL--APGTLGARSRSTTSFIRNVKPR-TGEVLK 184
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R R E+ DI+FK FE WTL+ L + QPE +LK++L + V N +G Y
Sbjct: 185 NARIPRNELLDILFKCFEDYEYWTLKGLREYVKQPEVYLKEVLDSIAVLNKRGPYALKYS 244
Query: 233 LKPEYK 238
LKPEYK
Sbjct: 245 LKPEYK 250
>gi|340370336|ref|XP_003383702.1| PREDICTED: general transcription factor IIF subunit 2-like
[Amphimedon queenslandica]
Length = 256
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 44/251 (17%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM- 59
+WL+K P VS K D + + ++ ++ +P ++S++ +F +
Sbjct: 26 VWLVKVPNYVSERWKKAKKDQE-------LGRMRITRNP----------NNSTTVQFFLA 68
Query: 60 -ELIST--ESGNA---PKRYSMDMSKD-LIPMSVFAES-SNGKISVEGKIKNKFDMRPHH 111
EL+ E G PK + +++ + +SVF ES S G + +EGKI + +++P
Sbjct: 69 PELLEVKMEDGTVTQLPKDHRVNLQETKHQSLSVFTESQSGGDLVIEGKISQRAEIQPVD 128
Query: 112 ENMENYGKLCRERTNKYMT-KSRQIQVIDND--NGSHMRPMPGMMIS--TGFTEKKKPQP 166
++ YM+ K QIQ + SH+ +P E + +
Sbjct: 129 SSI-------------YMSLKKHQIQQAEKTKFTASHLNELPSHSYKPVAYHPEHEAIER 175
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K E K+ R D+ + D++F F+R +T + L+ T QP +LK++LK++C+YN K
Sbjct: 176 KKKEPKKARDDKNVVFDLLFSAFQRHQYYTFKDLVDITQQPATYLKEILKEVCIYNTKSP 235
Query: 227 NQGSYELKPEY 237
++ +ELKPEY
Sbjct: 236 HKYMWELKPEY 246
>gi|91082807|ref|XP_968134.1| PREDICTED: similar to AGAP007002-PA [Tribolium castaneum]
gi|270007102|gb|EFA03550.1| hypothetical protein TcasGA2_TC013555 [Tribolium castaneum]
Length = 266
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 36/251 (14%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P V+ + SD + V K+ ++ ++ S + SS +
Sbjct: 20 VWLVKVPKYVANRWEKAPSDME-------VGKLKIT----KNGTPPQVSLTLSSAILNLN 68
Query: 61 LISTESGNAPKRYSMDMSK----------DLIPM---SVFAESSNGKISVEGKIKNKFDM 107
ES PK + +D+SK +IP +V E+ K+ +EGKI K +
Sbjct: 69 EPGEES--IPKDHRLDVSKVTQQTLGVFSHVIPTQTDAVVPETE--KLYMEGKIVQKLEC 124
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP+ +N Y KL E K +R+++ +D S+ +P+ + + E+KK
Sbjct: 125 RPYADNC--YMKLKLESIRKASLPTRKVKQLDRVVTSY-KPVSDHKNNIEYMERKK---- 177
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
+E K+ R D+ + +++F FE+ + +R L++ T QP +LK++LK++C YN K +
Sbjct: 178 -AEGKKARDDKDAVLEMLFAAFEKHQYYNIRDLVKITKQPITYLKEILKEVCNYNLKNPH 236
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 237 KNMWELKPEYR 247
>gi|195157940|ref|XP_002019852.1| GL12621 [Drosophila persimilis]
gi|194116443|gb|EDW38486.1| GL12621 [Drosophila persimilis]
Length = 282
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 25/250 (10%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPSNMDVGKLRISKTPGQKAQVSLSLTPAVLALDPDEKIPTEHV 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + A + S + A N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPEAAANIGKENS-----TAPGAAPDNEKLYMEGRIVQKLECR 139
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P + Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 140 PIADTC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 191
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 192 AEGKKARDDKNSVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 251
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 252 NMWELKKEYR 261
>gi|291190817|ref|NP_001167406.1| Transcription initiation factor IIF subunit beta [Salmo salar]
gi|223648348|gb|ACN10932.1| Transcription initiation factor IIF subunit beta [Salmo salar]
Length = 257
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 84 MSVF----AESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID 139
++VF +ESS +IS+EG + + + RP E+Y KL R + + R Q ++
Sbjct: 93 LAVFTETQSESSKERISLEGLVVQRAECRP--AVSESYMKLKRLQIEELSKPLRLSQQLE 150
Query: 140 NDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQ 199
++ +P+ + + KKK E KR R D+ ++ D++F FE+ + ++
Sbjct: 151 KAVTTNYKPVANHSYNLEYDRKKK-----DEGKRARADKQQVLDMLFSAFEKHQYYNIKD 205
Query: 200 LIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
L+ T QP +LK++L+D+ +YN KG+++ ++ELKPEY+ G
Sbjct: 206 LVDITKQPVSYLKEILRDIGIYNVKGTHKNTWELKPEYRHYQGG 249
>gi|125778480|ref|XP_001359998.1| GA19669 [Drosophila pseudoobscura pseudoobscura]
gi|54639748|gb|EAL29150.1| GA19669 [Drosophila pseudoobscura pseudoobscura]
Length = 282
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 25/250 (10%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPSNMDVGKLRISKTPGQKAQVSLSLTPAVLALDPDEKIPTEHV 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + A + S + A N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPEAATNIGKENS-----TAPGAAPDNEKLYMEGRIVQKLECR 139
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P + Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 140 PIADTC--YMKLKLESIRKASEPQRRVQPIDK-IVQNFKPVKDHAHNIEYRERKK----- 191
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 192 AEGKKARDDKNSVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 251
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 252 NMWELKKEYR 261
>gi|195389999|ref|XP_002053656.1| GJ23231 [Drosophila virilis]
gi|194151742|gb|EDW67176.1| GJ23231 [Drosophila virilis]
Length = 286
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 33/256 (12%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +++ + S+ D V K+ +S P Q + S S + + E
Sbjct: 25 VWLVKVPKYIAQKWEKAPSNMD-------VGKLRISKTPGQKAQVSLSLTPAVLALDPDE 77
Query: 61 LISTESG---NAPKRYSMDMSKDLIPMSVFAESSNGK---------------ISVEGKIK 102
I TE + + ++ + + P A +SNGK + +EG+I
Sbjct: 78 KIPTEHVLDVSQVTKQTLGVFSHMAPTEAAAVASNGKENGTGAASGTPDSEKLYMEGRIV 137
Query: 103 NKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKK 162
K + RP + Y KL E K R++Q ID ++ +P+ + + E+K
Sbjct: 138 QKLECRPIADTC--YMKLKLESIRKASEPQRRVQPIDKIVQNY-KPVKDHAHNIEYRERK 194
Query: 163 KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYN 222
K +E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN
Sbjct: 195 K-----AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYN 249
Query: 223 NKGSNQGSYELKPEYK 238
K ++ +ELK EY+
Sbjct: 250 MKNPHKNMWELKKEYR 265
>gi|327283876|ref|XP_003226666.1| PREDICTED: general transcription factor IIF subunit 2-like [Anolis
carolinensis]
Length = 228
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 93/158 (58%), Gaps = 13/158 (8%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCR---ERTNKYMTKSRQIQVIDN 140
++VF ES+ K+S+EG + + + RP ENY KL R E ++K ++ + Q++
Sbjct: 72 LTVFTESALEKLSLEGIVVQRAECRPAAS--ENYMKLKRLQIEESSKPVSWTMQLEKAVT 129
Query: 141 DNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQL 200
N +P+ + + +KKK + KR R ++ ++ D++F FE+ + ++ L
Sbjct: 130 TN---YKPVANHQYNIEYEKKKK-----EDGKRARAEKQQVLDMLFSAFEKHQYYNIKDL 181
Query: 201 IQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ T QP +LK++L+++ +YN KG+++ ++ELKPEY+
Sbjct: 182 VDITKQPVSYLKEILREIGIYNVKGTHKNTWELKPEYR 219
>gi|126305072|ref|XP_001362176.1| PREDICTED: general transcription factor IIF subunit 2-like
[Monodelphis domestica]
Length = 261
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 88 AESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR 147
+ES N ++S+EG + + + RP ENY +L R + + R Q +D ++ +
Sbjct: 109 SESRNNQLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLAQHLDKAVTTNFK 166
Query: 148 PMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
P+ + + +KKK + KR R ++ ++ D++F FE+ + ++ L+ T QP
Sbjct: 167 PVANHQNNIAYEKKKK-----EDGKRARAEKQQVLDMLFSAFEKHQYYNIKDLVDITKQP 221
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADGPAS 246
+LK++L+++ +YN KG+++ ++ELKPEY+ G S
Sbjct: 222 IIYLKELLREIGIYNVKGTHKNTWELKPEYRHYQGGDKS 260
>gi|195055594|ref|XP_001994698.1| GH14638 [Drosophila grimshawi]
gi|193892461|gb|EDV91327.1| GH14638 [Drosophila grimshawi]
Length = 287
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 33/256 (12%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +++ + ++ D V K+ +S P Q + S S + + E
Sbjct: 25 VWLVKVPKYIAQKWEKAPTNMD-------VGKLRISKTPGQKAQVSLSLTPAVLALDPDE 77
Query: 61 LISTESG---NAPKRYSMDMSKDLIPMSVFAESSNGK---------------ISVEGKIK 102
I TE + + ++ + + P A SSNGK + +EG+I
Sbjct: 78 KIPTEHVLDVSQVTKQTLGVFSHMTPTEAAAGSSNGKENGAAGASATPDSEKLYMEGRIV 137
Query: 103 NKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKK 162
K + RP + Y KL E K R++Q ID ++ +P+ + + E+K
Sbjct: 138 QKLECRPIADTC--YMKLKLESIRKASEPQRRVQPIDKIVQNY-KPVKDHAHNIEYRERK 194
Query: 163 KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYN 222
K +E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN
Sbjct: 195 K-----AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYN 249
Query: 223 NKGSNQGSYELKPEYK 238
K ++ +ELK EY+
Sbjct: 250 MKNPHKNMWELKKEYR 265
>gi|62955637|ref|NP_001017832.1| novel protein similar to H.sapiens GTF2F2, general transcription
factor IIF, polypeptide 2, 30kDa (GTF2F2, zgc:110187)
[Danio rerio]
gi|62202165|gb|AAH92783.1| Zgc:110187 [Danio rerio]
gi|182890810|gb|AAI65452.1| Zgc:110187 protein [Danio rerio]
Length = 256
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 123/252 (48%), Gaps = 34/252 (13%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDD--SARPVAKVILSIDPLQ-------SNEDSSSSSS 51
+WL+K P +S+ S + + K ++S + + S E SS S
Sbjct: 19 VWLVKVPKYLSQQWAKASGRGEVGKLKIGKAQGKTVVSFNLNEELTVVDCSGEKISSVRS 78
Query: 52 SSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHH 111
FTM+ + ++ ++VF ESS+ KI++EG + + + RP
Sbjct: 79 PREHPFTMQTVGGQT-----------------LAVFTESSD-KIALEGMVVQRAECRP-- 118
Query: 112 ENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEV 171
E+Y KL + + + R Q ++ ++ +P+ + + ++KK E
Sbjct: 119 AVSESYMKLKKLQIEESTKPLRFSQRLEKAITTNYKPVSNHSHNLEYEKRKK-----EEG 173
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
KR R D+ ++ +++F FE+ + +R L+ T QP +LK++L+++ VYN++G ++ ++
Sbjct: 174 KRARADKQKVLEMLFSAFEKHQFYNIRDLVDITKQPVIYLKEILREIGVYNSRGPHKSTW 233
Query: 232 ELKPEYKKAADG 243
ELKPEY+ +G
Sbjct: 234 ELKPEYRHYQEG 245
>gi|239790566|dbj|BAH71836.1| ACYPI008218 [Acyrthosiphon pisum]
Length = 257
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 32/251 (12%)
Query: 1 MWLMKCPALVSRSL----------KIPSSDN---DDDDSARPVAKVILSIDPLQSNEDSS 47
+WL+K P V+ KI ++ D + +++ +L +D +SNE
Sbjct: 15 LWLVKVPKYVADKWDNAPGSLDVGKIKVTNTIPGKRPDISLHLSEAVLCLDGEKSNEPIP 74
Query: 48 SSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDM 107
S + FT + + S + R S + P +V E+ ++++ GKI K +
Sbjct: 75 KSFKLDVSHFTSQTMVALSEH---RMSYN------PDAVVQETD--RLAILGKISQKLEC 123
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP + + Y L ++ K +RQ+Q +D + +P+ + + EKKK
Sbjct: 124 RPIGDQV--YMDLKKQAIRKAHIPTRQVQKLDK-VVQNFKPISDHKHNIEYNEKKK---- 176
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
SE K+ R D+ + ++FK FE+ + ++ L+ T QP +LK++LK++C YN K +
Sbjct: 177 -SEGKKARDDKDAVMAMLFKAFEKHQYYNIKDLVTLTKQPVVYLKEILKEVCNYNLKHPH 235
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 236 KNMWELKPEYR 246
>gi|450771|gb|AAA81888.1| dTFIIF30 [Drosophila melanogaster]
Length = 276
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 30/250 (12%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPEEKIPTEHI 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ T +R + S N K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGYSRTWHRPMARRTRLPRR----------HSDNEKLYMEGRIVQKLECR 134
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y KL E K R++Q ID + +P+ + + E+KK
Sbjct: 135 PIADNC--YMKLKLESIRKASEPQRRVQPIDKI-VQNFKPVKDHAHNIEYRERKK----- 186
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 187 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 246
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 247 NMWELKKEYR 256
>gi|303288686|ref|XP_003063631.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454699|gb|EEH52004.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 489
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+EG + KFD+RP + Y ++ R + K+R +Q + S + P+P T
Sbjct: 336 LEGTVSEKFDVRPADVDDSLYREVSARRIAEATRKTRVVQA--SKGPSRVAPLP-----T 388
Query: 157 GFTEKKKPQPKGSEVKRTRR-DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDML 215
K+ K +R R +RG +ED + L+ER+S W+ +QL +ET QP FLK+ L
Sbjct: 389 ARNIVKREDGKEDTRERAERMERGALEDKLMGLYERRSLWSFKQLKEETRQPAMFLKETL 448
Query: 216 KDLCVYNNKGSNQGSYELKPEYKK 239
L N +G N G Y LK YK+
Sbjct: 449 DGLATLNRRGPNVGMYSLKDMYKR 472
>gi|195107531|ref|XP_001998362.1| GI23671 [Drosophila mojavensis]
gi|193914956|gb|EDW13823.1| GI23671 [Drosophila mojavensis]
Length = 288
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 118/250 (47%), Gaps = 20/250 (8%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P +++ L+I + + + +L++DP +
Sbjct: 25 VWLVKVPKYIAQKWEKAPSNMDVGKLRISKTPGQKAQVSLSLTPAVLALDPDEKIPTEHV 84
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + + + K+ + A + K+ +EG+I K + R
Sbjct: 85 LDVSQVTKQTLGVFSHMAPTEATTAAANNGKENGSAAASATPDSEKLYMEGRIVQKLECR 144
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P + Y KL E K R++Q ID ++ +P+ + + E+KK
Sbjct: 145 PIADTC--YMKLKLESIRKASEPQRRVQPIDKIVQNY-KPVKDHAHNIEYRERKK----- 196
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN K ++
Sbjct: 197 AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHK 256
Query: 229 GSYELKPEYK 238
+ELK EY+
Sbjct: 257 NMWELKKEYR 266
>gi|389750468|gb|EIM91639.1| hypothetical protein STEHIDRAFT_144833 [Stereum hirsutum FP-91666
SS1]
Length = 348
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 99 GKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHM------RPMPGM 152
GKIK++ ++RP E Y K +ERT M+ +Q++ +D R G+
Sbjct: 150 GKIKHECNLRPRLS--ERYRKRVKERTRMAMSPVKQVKYLDEKGMGVGGQGGINRLSSGV 207
Query: 153 MISTGFTEKKKPQPKGSE---VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+ GFT+ KP+ KG + + R R ++ D++F +F + W ++ L + QPE
Sbjct: 208 TSTVGFTDLSKPKQKGVKGQFERMARMPRNQLLDMLFGIFREREFWPIKLLRERLQQPEV 267
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
+LK++L D+ + G + G +ELKP +K +A
Sbjct: 268 YLKEILNDIATLHRSGEHNGHWELKPGFKDSA 299
>gi|118084831|ref|XP_417039.2| PREDICTED: general transcription factor IIF subunit 2 isoform 2
[Gallus gallus]
Length = 262
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 20/168 (11%)
Query: 84 MSVFAESSN-------------GKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMT 130
++VF ESS K+S+EG + + + RP ENY KL R + +
Sbjct: 93 LTVFTESSTESQPEEKSESGSYDKLSLEGIVVQRAECRPAAS--ENYMKLKRFQIEESSK 150
Query: 131 KSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFE 190
R Q +D ++ +P+ + + +KKK + KR R D+ ++ D++F FE
Sbjct: 151 PVRLSQQLDKAVTTNYKPVANHQYNIEYEKKKK-----EDGKRARADKQQVLDMLFSAFE 205
Query: 191 RQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ + ++ L+ T QP +LK++L+++ +YN KG+++ ++ELKPEY+
Sbjct: 206 KHQYYNIKDLVDITKQPVIYLKEILREIGIYNVKGTHKNTWELKPEYR 253
>gi|148231943|ref|NP_001082266.1| general transcription factor IIF subunit 2 [Xenopus laevis]
gi|464520|sp|Q03123.1|T2FB_XENLA RecName: Full=General transcription factor IIF subunit 2; AltName:
Full=ATP-dependent helicase gtf2f2; AltName:
Full=Transcription initiation factor IIF subunit beta;
Short=TFIIF-beta; AltName: Full=Transcription initiation
factor RAP30
gi|65135|emb|CAA78835.1| transcription factor RAP30 [Xenopus laevis]
gi|49256181|gb|AAH73677.1| LOC398333 protein [Xenopus laevis]
Length = 264
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 93/167 (55%), Gaps = 19/167 (11%)
Query: 84 MSVFAESSNG------------KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTK 131
++V ES +G K+++EG + ++ + RP +NY ++ R++ +
Sbjct: 96 LTVLTESLSGQSEDKSENRVIDKLALEGIVVHRAECRP--AASDNYMQMKRKQIEESSKP 153
Query: 132 SRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFER 191
RQ Q ++ S+ +P+ + + +KKK + KR R D+ ++ D++F FE+
Sbjct: 154 KRQSQQLEKAVTSNYKPVSNHQYNIEYEKKKK-----DDGKRARVDKHQVLDMLFSAFEK 208
Query: 192 QSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ ++ L+ T QP +LK++L+D+ +YN KG+++ ++ELKPEY+
Sbjct: 209 HQYYNIKDLVDITKQPVTYLKEILRDIGIYNMKGTHKNTWELKPEYR 255
>gi|326914113|ref|XP_003203372.1| PREDICTED: general transcription factor IIF subunit 2-like
[Meleagris gallopavo]
Length = 262
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 20/168 (11%)
Query: 84 MSVFAESSN-------------GKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMT 130
++VF ESS K+S+EG + + + RP ENY KL R + +
Sbjct: 93 LTVFTESSTENQSEEKSESSSYDKLSLEGIVVQRAECRPAAS--ENYMKLKRFQIEESSK 150
Query: 131 KSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFE 190
R Q +D ++ +P+ + + +KKK + KR R D+ ++ D++F FE
Sbjct: 151 PVRLSQQLDKAVTTNYKPVANHQYNIEYEKKKK-----EDGKRARADKQQVLDMLFSAFE 205
Query: 191 RQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ + ++ L+ T QP +LK++L+++ +YN KG+++ ++ELKPEY+
Sbjct: 206 KHQYYNIKDLVDITKQPVIYLKEILREIGIYNVKGTHKNTWELKPEYR 253
>gi|193620369|ref|XP_001951556.1| PREDICTED: general transcription factor IIF subunit 2-like
[Acyrthosiphon pisum]
Length = 257
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 32/251 (12%)
Query: 1 MWLMKCPALVSRSL----------KIPSSDN---DDDDSARPVAKVILSIDPLQSNEDSS 47
+WL+K P V+ KI ++ D + +++ +L +D ++NE
Sbjct: 15 LWLVKVPKYVADKWDNAPGSLDVGKIKVTNTIPGKRPDISLHLSEAVLCLDGEKNNEPIP 74
Query: 48 SSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDM 107
S + FT + + S + R S + P +V E+ ++++ GKI K +
Sbjct: 75 KSFKLDVSHFTSQTMVALSEH---RMSYN------PDAVVQETD--RLAILGKISQKLEC 123
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP + + Y L ++ K +RQ+Q +D + +P+ + + EKKK
Sbjct: 124 RPIGDQV--YMDLKKQAIRKAHIPTRQVQKLDK-VVQNFKPISDHKHNIEYNEKKK---- 176
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
SE K+ R D+ + ++FK FE+ + ++ L+ T QP +LK++LK++C YN K +
Sbjct: 177 -SEGKKARDDKDAVMAMLFKAFEKHQYYNIKDLVTLTKQPVVYLKEILKEVCNYNLKHPH 235
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 236 KNMWELKPEYR 246
>gi|432931999|ref|XP_004081735.1| PREDICTED: general transcription factor IIF subunit 2-like [Oryzias
latipes]
Length = 253
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 89/155 (57%), Gaps = 8/155 (5%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
M+VF++S IS+EG + ++ + RP+ E+Y K+ R ++ + R Q +D
Sbjct: 93 MAVFSQSDTDGISLEGTVVHRAECRPN--VSEDYMKIKRLQSES-VKPQRLSQQLDRAIT 149
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
+ +P+ + F +KKK SE K R +R + D++F FE+ ++ + L+
Sbjct: 150 TVFKPVANHDFNVEFEKKKK-----SEGKMVRAERQVVMDMLFSAFEKHQYYSFKDLVDI 204
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++++++ V N KG+++ S+ELKPEY+
Sbjct: 205 TKQPVTYLKEIVREIGVCNRKGAHKSSWELKPEYQ 239
>gi|241829140|ref|XP_002414741.1| transcription initiation factor IIF, small subunit, putative
[Ixodes scapularis]
gi|215508953|gb|EEC18406.1| transcription initiation factor IIF, small subunit, putative
[Ixodes scapularis]
Length = 254
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 51/266 (19%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P ++ LKI N D + LS + + + +
Sbjct: 17 VWLVKVPKYIASRWNKAPPMSEAGRLKITKGPNGKTD-----IRFTLSDECVNMKDVTEK 71
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFA---------ESSNGKISVEG 99
S+ RF + IS ++ ++VF+ E S GK+ +EG
Sbjct: 72 STIPKEHRFVISNISNQN-----------------LAVFSQNKVVEDGVEHSTGKVCLEG 114
Query: 100 KIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFT 159
+ K + RP + + Y +L R+ K RQ++ +D ++ +P+ + F
Sbjct: 115 HVVQKGECRPMGD--DRYMQLKRQTILKASQPVRQVKQLDRIVQNY-KPVADHKHNLEFE 171
Query: 160 EKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLC 219
+KKK +E K+ R D+ ++ D++F FE+ + ++ L + T QP +LK++LK++C
Sbjct: 172 QKKK-----AEGKKAREDKDKVLDMLFSAFEKHQYYNIKDLEKITRQPVPYLKEILKEIC 226
Query: 220 VYNNKGSNQGSYELKPEYKKAADGPA 245
YN K ++ +ELKPEY+ D A
Sbjct: 227 NYNAKNPHKNMWELKPEYRHYKDQEA 252
>gi|442759999|gb|JAA72158.1| Putative transcription initiation factor iif small subunit rap30
[Ixodes ricinus]
Length = 254
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 51/266 (19%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P ++ LKI N D + LS + + + +
Sbjct: 17 VWLVKVPKYIASRWNKAPPMSEAGRLKITKGPNGKTD-----IRFTLSDECVNMKDVTEK 71
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFA---------ESSNGKISVEG 99
S+ RF + IS ++ ++VF+ E S GK+ +EG
Sbjct: 72 STIPKEHRFVISNISNQN-----------------LAVFSQNKVVEDGVEHSTGKVCLEG 114
Query: 100 KIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFT 159
+ K + RP + + Y +L R+ K RQ++ +D ++ +P+ + F
Sbjct: 115 HVVQKGECRPMGD--DRYMQLKRQTILKASQPIRQVKQLDRIVQNY-KPVADHKHNLEFE 171
Query: 160 EKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLC 219
+KKK +E K+ R D+ ++ D++F FE+ + ++ L + T QP +LK++LK++C
Sbjct: 172 QKKK-----AEGKKAREDKDKVLDMLFSAFEKHQYYNIKDLEKITRQPVPYLKEILKEIC 226
Query: 220 VYNNKGSNQGSYELKPEYKKAADGPA 245
YN K ++ +ELKPEY+ D A
Sbjct: 227 NYNAKNPHKNMWELKPEYRHYKDQEA 252
>gi|226372114|gb|ACO51682.1| Transcription initiation factor IIF subunit beta [Rana catesbeiana]
Length = 264
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 19/167 (11%)
Query: 84 MSVFAESSNG------------KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTK 131
++VF ES G K+++EG + + + R E+Y ++ R + +
Sbjct: 96 LTVFTESLTGQPEEKSENRTTDKLAIEGIVVQRAECRA--AASEHYMQMKRRQIEESSKP 153
Query: 132 SRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFER 191
RQ Q I+ + +P+ + + KKK E KR R D+ ++ D++F FE+
Sbjct: 154 KRQSQQIERAVTINYKPVSNHQNNIEYERKKK-----DEGKRARADKQQVLDMLFSAFEK 208
Query: 192 QSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ L+ L+ T QP +LK++LKD+ VYN KG+++ ++EL+PEY+
Sbjct: 209 HQYYNLKDLVDITKQPVLYLKEILKDIGVYNVKGTHKNTWELRPEYR 255
>gi|313569846|ref|NP_001002127.2| general transcription factor IIF, polypeptide 2a isoform 1 [Danio
rerio]
Length = 265
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 125/257 (48%), Gaps = 37/257 (14%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +S+ + + V K L I Q + S + + T T+E
Sbjct: 18 VWLVKVPKYLSQQWTKATGRGE-------VGK--LRISKNQGKAEVSFTLNEELT--TIE 66
Query: 61 LISTESG--NAPKRYSMDM-SKDLIPMSVFAESSNG----------------KISVEGKI 101
I ++ AP+ + + + ++VF E+S+G KI++EG +
Sbjct: 67 TIGEKTSMVRAPREHPFTLQTVGGQTLAVFTENSSGQSDAEASGSGTGSGPDKIALEGVV 126
Query: 102 KNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEK 161
+ + RP E+Y +L + + + R Q +D ++ +P+ + + ++
Sbjct: 127 VQRAECRP--AVSESYMRLKKLQIEELSKPLRFSQQLDKAVTTNYKPVANHAYNLDYEKR 184
Query: 162 KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVY 221
KK E KR R D+ ++ D++F FE+ + ++ L+ T QP +LK++L+D+ +Y
Sbjct: 185 KK-----EEGKRARADKQQVLDMLFSAFEKHQFYNIKDLVDITKQPVIYLKEILRDIGIY 239
Query: 222 NNKGSNQGSYELKPEYK 238
N KG+++ ++ELKPEY+
Sbjct: 240 NVKGTHKNTWELKPEYR 256
>gi|348515663|ref|XP_003445359.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
1 [Oreochromis niloticus]
Length = 255
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
M+VF+ S +IS+EG + ++ + RP ++Y KL + + + + R Q ++
Sbjct: 93 MAVFSHSDTDEISLEGMVVHRAECRP--VVTDSYMKLKKLQIKESVKPQRLSQQLERAVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
+ +P+ + + +KKK +E K R +R + D++F FE+ + ++ L+
Sbjct: 151 TIFKPVANHDFNVEYEKKKK-----TEGKMVRAERQLVLDMLFSAFEKHQYYNIKALVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++++++ YN+KG+++ ++ELKPEY+
Sbjct: 206 TKQPVTYLKEIMREIGTYNSKGAHKSTWELKPEYR 240
>gi|195451370|ref|XP_002072887.1| GK13842 [Drosophila willistoni]
gi|194168972|gb|EDW83873.1| GK13842 [Drosophila willistoni]
Length = 280
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 39/255 (15%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +++ + S+ D V K+ +S P Q + S S + + E
Sbjct: 26 VWLVKVPKYIAQKWEKAPSNMD-------VGKLRISKTPGQKAQVSLSLTPAVLALDPEE 78
Query: 61 LISTESGNAPKRYSMDMSKDLI-PMSVFAE----------------SSNGKISVEGKIKN 103
I TE + +D+S+ + VF+ + N K+ +EG+I
Sbjct: 79 KIPTE-------HVLDVSQVTKQTLGVFSHMAPAEAAAAAAAAAAAADNEKLYMEGRIVQ 131
Query: 104 KFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKK 163
K + RP + Y KL E K R++Q ID ++ +P+ + + E+KK
Sbjct: 132 KLECRPIADTC--YMKLKLESIRKASEPQRRVQPIDKIVQNY-KPVKDHAHNIEYRERKK 188
Query: 164 PQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNN 223
+E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LKD+C YN
Sbjct: 189 -----AEGKKARDDKNAVMDMLFNAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNM 243
Query: 224 KGSNQGSYELKPEYK 238
K ++ +ELK EY+
Sbjct: 244 KNPHKNMWELKKEYR 258
>gi|449280331|gb|EMC87658.1| General transcription factor IIF subunit 2 [Columba livia]
Length = 262
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 1 MWLMKCPALVSRSLKIPSSDND------DDDSARPVAKVILSIDPLQSNEDSSSSSSSSS 54
MWL+K P +S+ S + + R L+ + ++ +S S+
Sbjct: 18 MWLVKVPKYLSQQWNKASGRGEVGKLRITKNQGRTEVSFTLNEELANISDIGGKPTSVSA 77
Query: 55 TRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENM 114
R ++ + G ++ + S + P SS+ K+++EG + + + RP
Sbjct: 78 PREHPFILQSVGGQTLTVFT-ESSVESQPDEKSESSSSDKLALEGIVVQRAECRPAAS-- 134
Query: 115 ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRT 174
ENY KL R + + R Q +D ++ +P+ + + +KKK + KR
Sbjct: 135 ENYMKLKRLQIEESSKPVRLSQQLDKAVTTNYKPVANHQYNIEYEKKKK-----EDGKRA 189
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
R D+ ++ D++F FE+ + ++ L+ T QP +LK++L+++ +YN KG+++ ++ELK
Sbjct: 190 RADKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVIYLKEILREIGIYNVKGTHKNTWELK 249
Query: 235 PEYK 238
PEY+
Sbjct: 250 PEYR 253
>gi|351715101|gb|EHB18020.1| General transcription factor IIF subunit 2 [Heterocephalus glaber]
Length = 271
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 84 MSVFAESSN--GKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDND 141
++VF ESS+ +++ EG + + + RP ENY +L R + + R Q +D
Sbjct: 113 LTVFTESSSVVQRLNAEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKV 170
Query: 142 NGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLI 201
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 171 VTTNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLV 225
Query: 202 QETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 226 DITKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 262
>gi|321464705|gb|EFX75711.1| hypothetical protein DAPPUDRAFT_306632 [Daphnia pulex]
Length = 272
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 77 MSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQ 136
S+ P + + KI EGK+ K + RP +Y KL R+ K +R ++
Sbjct: 111 FSQQTTPATTNSPMETEKIIFEGKVAQKLECRPTAN--ASYMKLKRDSLIKAAQPTRIVK 168
Query: 137 VIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWT 196
+D S+ +P IS K+ + K +E K+ R D+G++ D++F FE+ +
Sbjct: 169 QLDRVVQSY-KP-----ISDHKHNKEFDEKKKAEGKKARDDKGKVMDMLFAAFEKHQYYN 222
Query: 197 LRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAAD 242
++ L++ T+QP +LK++LKD+CVYN K ++ +ELKPEY+ D
Sbjct: 223 IKDLVKLTNQPVTYLKEILKDVCVYNLKNPHKNMWELKPEYRHYKD 268
>gi|332376103|gb|AEE63192.1| unknown [Dendroctonus ponderosae]
Length = 265
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 85 SVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGS 144
SV E+ K+ +EGKI K + RP+ + Y KL E K +R+++ +D S
Sbjct: 105 SVVPETE--KLHMEGKIVQKLECRPYADTC--YMKLKLESIRKASLPTRKVKQLDRVVHS 160
Query: 145 HMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQET 204
+ +P+ + + E+KK +E K+ R D+ + +++F FE+ + ++ L++ T
Sbjct: 161 Y-KPVSDHKNNIEYMERKK-----AEGKKARDDKDSVLEMLFSAFEKHQYYNIKDLVKIT 214
Query: 205 DQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
QP +LK++LK++C YN K ++ +ELKPEY+
Sbjct: 215 RQPITYLKEILKEVCNYNLKNPHKNMWELKPEYR 248
>gi|225717456|gb|ACO14574.1| Transcription initiation factor IIF subunit beta [Caligus clemensi]
Length = 275
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 22/246 (8%)
Query: 1 MWLMKCPALVS-RSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P +S R K P DN+ R V + D S +D + T
Sbjct: 22 VWLVKVPKYISDRWEKAP--DNEVVGKLRIVKRARAKPDVSFSLDDKIVAKREG----TP 75
Query: 60 ELISTESGNAPKRYSMDMSKDLI-PMSVFAE----SSNG--KISVEGKIKNKFDMRPHHE 112
E ++ + PK++ +S + + VF+ +S G ++S+EG++ K + RP +
Sbjct: 76 ESKTSTNQAIPKQHKFIVSNVMAQTLGVFSRLTSSASEGPDRVSLEGRVVKKAECRPISD 135
Query: 113 NMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVK 172
+ Y + RE K + +RQ +D +H +P+ + +KK E K
Sbjct: 136 --KTYMSVKREAILKAIEPTRQTVQLDR-AVNHYKPISNHAANIEHARRKK-----EEGK 187
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
++R D+ ++ + +F LFE+ + ++ L++ET QP LK++LK +C YN K ++ +E
Sbjct: 188 KSRDDKEKVMERLFALFEKHQYYNIKDLVRETRQPITHLKEVLKGVCNYNLKNPHKNMWE 247
Query: 233 LKPEYK 238
LKPEY+
Sbjct: 248 LKPEYR 253
>gi|346469073|gb|AEO34381.1| hypothetical protein [Amblyomma maculatum]
Length = 255
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
Query: 89 ESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP 148
E S+GK+ +EG + K + RP ++ Y +L R+ K RQ++ +D ++ +P
Sbjct: 105 EHSSGKVYLEGHVVQKGECRPMGDD--RYMQLKRQIFVKASQPVRQVKQLDRIVQNY-KP 161
Query: 149 MPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPE 208
+ + F +KKK +E K+ R D+ ++ D++F FE+ + ++ L + T QP
Sbjct: 162 VADHKHNLEFEQKKK-----AEGKKAREDKDKVLDMLFSAFEKHQYYNIKDLEKITRQPV 216
Query: 209 QFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+LK++LK++C YN K ++ +ELKPEY+
Sbjct: 217 PYLKEILKEICNYNAKNPHKNMWELKPEYR 246
>gi|348516620|ref|XP_003445836.1| PREDICTED: general transcription factor IIF subunit 2-like
[Oreochromis niloticus]
Length = 266
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 124/255 (48%), Gaps = 33/255 (12%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +S+ + + V K+ + Q + S + + T ++
Sbjct: 18 VWLVKVPKYLSQQWAKATGRGE-------VGKLRICKKGNQGKPEVSFTLNEELT--VID 68
Query: 61 LISTESGNAPKRYSMDM-SKDLIPMSVFAESSNG----------------KISVEGKIKN 103
I ++ +AP+ + M S ++VF E+S+ KI++EG +
Sbjct: 69 GIEDKTVSAPREHPFTMQSVGGQTLAVFTETSSERSDGSSSGSGAGTGPDKITLEGVVVQ 128
Query: 104 KFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKK 163
+ + RP E+Y +L R + + +R Q +D ++ +P+ + + KKK
Sbjct: 129 RAECRP--AVSESYMRLKRLQIEESSKPARLSQQLDKAVTNNYKPVANHDYNREYERKKK 186
Query: 164 PQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNN 223
E KR R D+ ++ D++F FE+ + ++ L+ T QP +LK++L+D+ +YN
Sbjct: 187 -----EEGKRARADKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVIYLKEILRDIGIYNV 241
Query: 224 KGSNQGSYELKPEYK 238
KG+++ ++EL+PEY+
Sbjct: 242 KGTHKNTWELRPEYR 256
>gi|47940041|gb|AAH71444.1| General transcription factor IIF, polypeptide 2 [Danio rerio]
Length = 265
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 124/257 (48%), Gaps = 37/257 (14%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +S+ + + V K L I Q + S + + T T+E
Sbjct: 18 VWLVKVPKYLSQQWTKATGRGE-------VGK--LRISKNQGKAEVSFTLNEELT--TIE 66
Query: 61 LISTESG--NAPKRYSMDM-SKDLIPMSVFAESSNG----------------KISVEGKI 101
I ++ AP+ + + + ++VF E+S+G KI++ G +
Sbjct: 67 TIGEKTSMVRAPREHPFTLQTVGGQTLAVFTENSSGQSDAEASGSGTGSGPDKIALGGVV 126
Query: 102 KNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEK 161
+ + RP E+Y +L + + + R Q +D ++ +P+ + + ++
Sbjct: 127 VQRAECRPAVS--ESYMRLKKLQIEELSKPLRFSQQLDKAVTTNYKPVANHAYNLDYEKR 184
Query: 162 KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVY 221
KK E KR R D+ ++ D++F FE+ + ++ L+ T QP +LK++L+D+ +Y
Sbjct: 185 KK-----EEGKRARADKQQVLDMLFSAFEKHQFYNIKDLVDITKQPVIYLKEILRDIGIY 239
Query: 222 NNKGSNQGSYELKPEYK 238
N KG+++ ++ELKPEY+
Sbjct: 240 NVKGTHKNTWELKPEYR 256
>gi|348515665|ref|XP_003445360.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
2 [Oreochromis niloticus]
Length = 271
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 121/256 (47%), Gaps = 35/256 (13%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILS------------IDPLQS----NE 44
+WL+K P +S+ + D V K+ + ID L + E
Sbjct: 18 VWLVKVPKYLSQQWDKAAEKGD-------VGKITIGKKQGKTEVCFSLIDELTALDAVGE 70
Query: 45 DSSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGK--ISVEGKIK 102
+ +S FTM + G +S + P + AE+ +G+ IS+EG +
Sbjct: 71 NDASLQVPKDHPFTMHTVG---GQTMAVFSHSDTGQSKPTTSPAETGSGRDEISLEGMVV 127
Query: 103 NKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKK 162
++ + RP ++Y KL + + + + R Q ++ + +P+ + + +KK
Sbjct: 128 HRAECRP--VVTDSYMKLKKLQIKESVKPQRLSQQLERAVTTIFKPVANHDFNVEYEKKK 185
Query: 163 KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYN 222
K +E K R +R + D++F FE+ + ++ L+ T QP +LK++++++ YN
Sbjct: 186 K-----TEGKMVRAERQLVLDMLFSAFEKHQYYNIKALVDITKQPVTYLKEIMREIGTYN 240
Query: 223 NKGSNQGSYELKPEYK 238
+KG+++ ++ELKPEY+
Sbjct: 241 SKGAHKSTWELKPEYR 256
>gi|387019065|gb|AFJ51650.1| General transcription factor IIF subunit 2-like [Crotalus
adamanteus]
Length = 262
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 26/171 (15%)
Query: 84 MSVFAESS-------------NGKISVEGKIKNKFDMRPHHENMENYGKLCR---ERTNK 127
++VF ESS N K+S+EG + + + RP ENY KL R E ++K
Sbjct: 93 LTVFTESSGESQTDEKSDSSNNEKLSLEGIVVQRAECRPAAN--ENYMKLKRLQIEESSK 150
Query: 128 YMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFK 187
++ + Q+ D ++ +P+ + + +KKK + KR R ++ ++ D++F
Sbjct: 151 PVSWTMQL---DKAVTTNYKPVANHQYNIEYDKKKK-----EDGKRARAEKQQVLDMLFS 202
Query: 188 LFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
FE+ + ++ L+ T QP +LK++L+++ +YN KG ++ ++ELKPEY+
Sbjct: 203 AFEKHQYYNIKDLVDITKQPVIYLKEILREIGIYNFKGPHKSTWELKPEYR 253
>gi|169863699|ref|XP_001838468.1| hypothetical protein CC1G_09096 [Coprinopsis cinerea okayama7#130]
gi|116500507|gb|EAU83402.1| hypothetical protein CC1G_09096 [Coprinopsis cinerea okayama7#130]
Length = 387
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 81 LIPMSVFAESSNGKISV-EGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID 139
IP +S + ++ G+IK++ ++RP Y K RER KY T +RQ+ I+
Sbjct: 178 FIPPGAAPANSRARTTILTGRIKHECNLRPSFS--ATYRKQMRERHRKYNTPTRQVMRIE 235
Query: 140 NDNGSHMR-------PMPGMMISTGFTE--KKKPQP-KGSEVKRTRRDRGEMEDIMFKLF 189
+ S R G+ F++ + KP+P KG+ + R R ++ D +F LF
Sbjct: 236 DAGVSGGRGGINRLSSGVGVGAGGAFSDLVRTKPKPTKGTFERMARMPRNQLLDNLFSLF 295
Query: 190 ERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
Q W+++ L + T QPE +LK++L D+ + G + G +ELK +K
Sbjct: 296 REQQRWSIKPLRERTQQPEVYLKEVLSDIAFLHRSGEHNGLWELKANFK 344
>gi|410912909|ref|XP_003969931.1| PREDICTED: general transcription factor IIF subunit 2-like
[Takifugu rubripes]
Length = 249
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 124/239 (51%), Gaps = 18/239 (7%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P +S+ + + + V K+ + Q + S + + T +E
Sbjct: 17 VWLVKVPKYLSQQWEKATGRGE-------VGKLQICKKGSQGKPEVSFNLNEELT--VIE 67
Query: 61 LISTESGNAPKRYSMDM-SKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGK 119
+ ++ +AP + M S ++VF E+++ K+++EG + + D RP ENY +
Sbjct: 68 GLEKKTVSAPHEHKFTMQSVGGQILAVFTETTSDKLALEGMVVQRADCRPAVN--ENYMR 125
Query: 120 LCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRG 179
L R + + +R Q I N ++ +P+ + + +KKK E KR R D+
Sbjct: 126 LKRLQIEESSKPTRLSQQIQNPV-TNYKPVANHSYNLEYEKKKK-----EEGKRARADKQ 179
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
++ D++F FE+ + ++ L+ T QP +LK++L+D+ YN KG+++ ++EL+PEY+
Sbjct: 180 QVLDMLFSAFEKHQYYNIKDLVDITKQPVIYLKEILRDIGHYNIKGTHKNTWELRPEYR 238
>gi|432851975|ref|XP_004067134.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
3 [Oryzias latipes]
Length = 242
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 8/160 (5%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ KI++EG + + + RP E+Y KL R + + SR Q +
Sbjct: 86 LAVFTESSSDKIALEGVVVQRAECRP--AVSESYMKLKRLQIEESSKPSRLSQQLSKPVT 143
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P ++ ++ + K E KR R D+ ++ +++F FE+ + ++ L+
Sbjct: 144 NY-KP-----VANHEYNREYEKKKKEEGKRARADKQQVLEMLFSAFEKHQYYNIKDLVDI 197
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
T QP +LK++L+D+ +YN KG+++ ++ELKPEY+ G
Sbjct: 198 TKQPVIYLKEILRDIGIYNVKGTHKNTWELKPEYRHYQPG 237
>gi|348515667|ref|XP_003445361.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
3 [Oreochromis niloticus]
Length = 259
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 90/159 (56%), Gaps = 11/159 (6%)
Query: 84 MSVFA----ESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID 139
M+VF+ ES +IS+EG + ++ + RP ++Y KL + + + + R Q ++
Sbjct: 93 MAVFSHSDTESYKNEISLEGMVVHRAECRP--VVTDSYMKLKKLQIKESVKPQRLSQQLE 150
Query: 140 NDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQ 199
+ +P+ + + +KKK +E K R +R + D++F FE+ + ++
Sbjct: 151 RAVTTIFKPVANHDFNVEYEKKKK-----TEGKMVRAERQLVLDMLFSAFEKHQYYNIKA 205
Query: 200 LIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L+ T QP +LK++++++ YN+KG+++ ++ELKPEY+
Sbjct: 206 LVDITKQPVTYLKEIMREIGTYNSKGAHKSTWELKPEYR 244
>gi|432851973|ref|XP_004067133.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
2 [Oryzias latipes]
Length = 249
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 8/160 (5%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ KI++EG + + + RP E+Y KL R + + SR Q +
Sbjct: 93 LAVFTESSSDKIALEGVVVQRAECRP--AVSESYMKLKRLQIEESSKPSRLSQQLSKPV- 149
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P ++ ++ + K E KR R D+ ++ +++F FE+ + ++ L+
Sbjct: 150 TNYKP-----VANHEYNREYEKKKKEEGKRARADKQQVLEMLFSAFEKHQYYNIKDLVDI 204
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
T QP +LK++L+D+ +YN KG+++ ++ELKPEY+ G
Sbjct: 205 TKQPVIYLKEILRDIGIYNVKGTHKNTWELKPEYRHYQPG 244
>gi|336363992|gb|EGN92358.1| hypothetical protein SERLA73DRAFT_191197 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383070|gb|EGO24219.1| hypothetical protein SERLADRAFT_467154 [Serpula lacrymans var.
lacrymans S7.9]
Length = 361
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR-------PM 149
+ G+IK++ ++RP E+Y + RER+ KY T RQI++I++ S R
Sbjct: 166 LTGRIKHECNLRPIFN--ESYRRQMRERSRKYNTPRRQIRMIEDAGVSGGRGGINRLSSG 223
Query: 150 PGMMISTGFTE--KKKPQP-KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQ 206
G+ F++ K KP+P KG+ + R R ++ D++F LF Q W+++ L + T Q
Sbjct: 224 VGVGAGGAFSDLIKSKPKPAKGAFERMARMPRNQLLDLLFTLFREQPRWSIKPLRERTQQ 283
Query: 207 PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
PE +LK++L ++ N G G +EL + K
Sbjct: 284 PEAYLKEVLGEIGQLNRSGEYNGMWELSEVFTK 316
>gi|410897211|ref|XP_003962092.1| PREDICTED: general transcription factor IIF subunit 2-like
[Takifugu rubripes]
Length = 252
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 89 ESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP 148
E+S+ +S+EG + ++ + P + NY KL + + + R Q ++ + +P
Sbjct: 102 ENSSDALSLEGTVVHRAECTPVVND--NYMKLKKMQIKECTKCPRLSQQLERAITTVFKP 159
Query: 149 MPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPE 208
+ + + +KKK SE K R +R + D++F FE+ + +++L+ T QP
Sbjct: 160 VANHDFNIVYEKKKK-----SEGKMVRAERQVVLDMLFSAFEKHQYYNIKELVDITKQPV 214
Query: 209 QFLKDMLKDLCVYNNKGSNQGSYELKPEYK--KAADG 243
+LK++LK++ YNNKG ++ ++ELKPEY+ + A+G
Sbjct: 215 TYLKEILKEIGTYNNKGPHKSTWELKPEYRHYQTAEG 251
>gi|390598822|gb|EIN08219.1| hypothetical protein PUNSTDRAFT_143873 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 386
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+ G ++++ ++RP + +Y + + R+ T RQI++ID+ S M+S+
Sbjct: 190 LAGAVRHECNVRPMFTS--SYRRRMKARSVAANTPLRQIRMIDDVISSTDGINKINMLSS 247
Query: 157 G---------FTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
G F + K+ PKG + R R ++ D++F LF +Q W ++ L + T QP
Sbjct: 248 GVQDSSAFRGFVKTKQKPPKGQFERMARMPRNQLLDMLFFLFRQQERWPIKILRERTQQP 307
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
E +LK++L ++ V G G++ELKP +++
Sbjct: 308 EVYLKEVLSEIAVLTRSGEFSGTWELKPNFRE 339
>gi|357622901|gb|EHJ74261.1| putative Transcription initiation factor IIF subunit beta [Danaus
plexippus]
Length = 271
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 43/255 (16%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P ++ S D + V K+ +S P Q + S S +
Sbjct: 23 VWLVKVPKYIANKWDKASGDIE-------VGKLKISRVPGQRAQVQLSLSEAV------- 68
Query: 61 LISTESGNA--PKRYSMDMSK-DLIPMSVFAES----------SNGKISVEGKIKNKFDM 107
L E G PK + +D+S + VF+ + + K+ +EG+I K +
Sbjct: 69 LCLNEPGEQALPKEHRLDVSNVTRQSLGVFSHAVPSNTDTVVPESEKLYMEGRIVQKLEC 128
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQ----VIDNDNGSHMRPMPGMMISTGFTEKKK 163
+P+ + Y KL E K + RQ+Q ++ N +P+ + + KKK
Sbjct: 129 KPYAD--PTYYKLKSESIRKALMPQRQVQQLKGIVQN-----FKPVSDHKHNIDYQVKKK 181
Query: 164 PQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNN 223
+E K+ R D+ + +++F FE+ + ++ L T QP +LK++LK++C YN
Sbjct: 182 -----AEGKKARDDKESVLNVLFAAFEKHQYYNIKDLQNITRQPIVYLKEILKEVCNYNL 236
Query: 224 KGSNQGSYELKPEYK 238
K ++ +ELKPEY+
Sbjct: 237 KNPHKNMWELKPEYR 251
>gi|332018908|gb|EGI59454.1| General transcription factor IIF subunit 2 [Acromyrmex echinatior]
Length = 269
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 32/250 (12%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P ++ + + + V K+ ++ +P Q E S S + +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE-------VGKLKITKNPGQKAEVSLKLSEA-----VLA 68
Query: 61 LISTESGNAPKRYSMDMSKDLIPM-SVFAESS-----------NGKISVEGKIKNKFDMR 108
L + G PK++ +D++ M VF+ + K+ +EG+I K + R
Sbjct: 69 LKESGEGEIPKQHRLDVTTVTRQMLGVFSHVAPSTSSDAIVPETEKLFMEGRIVQKLECR 128
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P+ +N Y KL E + RQ+Q +D + +P+ + + EKKK
Sbjct: 129 PYADNC--YMKLKLESIKRASVPQRQVQQLDR-VVQNFKPVSDHKHNIEYAEKKK----- 180
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K+ R D+ + D++F FE+ + +R L++ T QP +LK++L ++C YN K ++
Sbjct: 181 AEGKKMRDDKDAVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYNLKNPHR 240
Query: 229 GSYELKPEYK 238
+ELKPEY+
Sbjct: 241 NMWELKPEYR 250
>gi|339236175|ref|XP_003379642.1| general transcription factor IIF subunit 2 [Trichinella spiralis]
gi|316977683|gb|EFV60754.1| general transcription factor IIF subunit 2 [Trichinella spiralis]
Length = 192
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 63 STESGNAPKRYSMDMS----KDLIPMSVFAESSN--GKISVEGKIKNKFDMRPHHENMEN 116
S++ GN P + S + L+PM AE SN K + G++ K + RP + +
Sbjct: 11 SSDEGNTPLEHRFITSGFSNQTLLPMKTHAEESNEFKKFVLLGRVVQKAECRP--PSNDA 68
Query: 117 YGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRR 176
Y K+ + N S+ + N + ++ P + + +P K R
Sbjct: 69 YMKM---KINHIEAVSKPQNKVITINRAEVKFKPSSVPTA--------EPSKKAEKSVRL 117
Query: 177 DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
R E+ D +F FE+ ++ L L++ T QP FLKD+L ++ YN + N+ ++ELKPE
Sbjct: 118 SREELRDALFLAFEKNPHYKLVDLVRMTQQPPNFLKDVLSEIACYNTQHPNRYTWELKPE 177
Query: 237 YKKAAD 242
Y+ +D
Sbjct: 178 YRLYSD 183
>gi|226503|prf||1515353A transcription initiation factor RAP30
Length = 234
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
++VF ESS+ K+S+EG + + + RP ENY +L R + + R Q +D
Sbjct: 93 LTVFTESSSDKLSLEGIVVQRAECRP--AASENYMRLKRLQIEESSKPVRLSQQLDKVVT 150
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 151 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 205
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQ 228
T QP +LK++LK++ V N KGS +
Sbjct: 206 TKQPVVYLKEILKEIGVQNVKGSTK 230
>gi|392595271|gb|EIW84595.1| hypothetical protein CONPUDRAFT_142809 [Coniophora puteana
RWD-64-598 SS2]
Length = 351
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID-----NDNGSHMRPMPG 151
V G+I+++ +RP ++Y K RERT Y T RQI++I+ G + G
Sbjct: 164 VTGRIRHECSLRPIFN--DSYRKHMRERTRVYNTPQRQIRMIEEAGVRGGRGGINQLSSG 221
Query: 152 MMISTGFTE----KKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
+ S F++ K +P PKG+ + R R ++ D++F LF Q W ++ L + T QP
Sbjct: 222 VNNSGSFSDLVKSKNRP-PKGAFERMARMPRNQLLDMLFSLFREQPRWPIKGLRERTQQP 280
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
E +LK++L ++ + G + G +EL +K
Sbjct: 281 EVYLKEILNEIASLHRSGEHNGLWELSEVFK 311
>gi|320582620|gb|EFW96837.1| transcription initiation factor TFIIF middle subunit [Ogataea
parapolymorpha DL-1]
Length = 406
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 36 SIDPLQSNE-DSSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGK 94
+++PL E + S+ S++ I G + + + K ++P FA++ K
Sbjct: 159 TLNPLDGEEPEESNPWSTAKVPQRASYIPEARGRGYEEENFEEPKKVVP---FAKTIPKK 215
Query: 95 ISVEGKIKNKFDMRPHHENMENYGKLCRE-RTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
++ GKI ++ + P + N KL + R MTK + I + + N ++ G
Sbjct: 216 TALVGKIVHECQVIPTKLSTNNKLKLLEQKRRLAQMTKRKTITYMKDANAGVLQGRTGPN 275
Query: 154 ISTGFTEK------KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
+ TG T + + + + E + +R DR + ++F LF WTL+ + ++T+QP
Sbjct: 276 LQTGSTIQLSRELAARKEQQRLEGRASRMDREHLMKVLFNLFNEYDYWTLKGIREKTNQP 335
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
E +LKD L+++ V KG+ Y LK EYKK+
Sbjct: 336 EAYLKDCLENIAVMERKGTYALKYRLKDEYKKS 368
>gi|318037396|ref|NP_001187504.1| general transcription factor IIf subunit 2 [Ictalurus punctatus]
gi|308323183|gb|ADO28728.1| general transcription factor IIf subunit 2 [Ictalurus punctatus]
Length = 265
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 23/171 (13%)
Query: 84 MSVFAESSNG----------------KISVEGKIKNKFDMRPHHENMENYGKLCRERTNK 127
++VF E+S+G KI++EG + + + R E+Y +L R + +
Sbjct: 93 LAVFTETSSGQSDAEGSSSGTATGPDKIALEGLVVQRAECRAAAN--EHYMRLKRLQIEE 150
Query: 128 YMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFK 187
R Q +D ++ +P+ + + +KKK E KR R DR ++ D++F
Sbjct: 151 SSKPHRFSQQLDKAVTTNYKPVANHAYNLDYEKKKK-----EEGKRARADRQQVLDMLFS 205
Query: 188 LFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
FE+ + ++ L+ T QP +LK++L+D+ +YN KG+++ ++ELKPEY+
Sbjct: 206 AFEKHQYYNIKDLVDITKQPVIYLKEILRDIGIYNVKGTHKNTWELKPEYR 256
>gi|313245840|emb|CBY34829.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 129 MTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKL 188
M + R +Q+ + H++P+ G T K+ + KG+E KRTR D ++ + +L
Sbjct: 156 MQRKRAVQLTEVPQ--HIKPV------NGITRKEIQEAKGNE-KRTRMDDNQLTSRLLEL 206
Query: 189 FERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
FE+ +TL+ L T QP FLK+ LK++ VYN++ + + +ELKPEY+
Sbjct: 207 FEKHQYYTLKDLCDITKQPTAFLKEKLKEIAVYNSRATQRNMWELKPEYR 256
>gi|313225075|emb|CBY20868.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 129 MTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKL 188
M + R +Q+ + H++P+ G T K+ + KG+E KRTR D ++ + +L
Sbjct: 156 MQRKRAVQLTEVPQ--HIKPV------NGITRKEIQEAKGNE-KRTRMDDNQLTSRLLEL 206
Query: 189 FERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
FE+ +TL+ L T QP FLK+ LK++ VYN++ + + +ELKPEY+
Sbjct: 207 FEKHQYYTLKDLCDITKQPTAFLKEKLKEIAVYNSRATQRNMWELKPEYR 256
>gi|156555618|ref|XP_001602997.1| PREDICTED: general transcription factor IIF subunit 2-like [Nasonia
vitripennis]
Length = 270
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
K+S+EGKI K + RPH +N Y KL E K RQ+Q + + +P+
Sbjct: 115 KLSMEGKIVQKLECRPHADN--TYMKLKLESIKKASIPQRQVQQLQR-AVQNFKPVSDHK 171
Query: 154 ISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKD 213
+ + EKK +E K+ R D+ + +++F FE+ + ++ L++ T QP +LK+
Sbjct: 172 HNIEYAEKK-----KAEGKKMRDDKAVVLEMLFAAFEKHQYYNIKDLVKITRQPVVYLKE 226
Query: 214 MLKDLCVYNNKGSNQGSYELKPEYKKAAD 242
+L ++C YN K ++ +ELKPEY+ D
Sbjct: 227 ILNEVCNYNLKNPHRNMWELKPEYRHYKD 255
>gi|170065599|ref|XP_001868006.1| transcription initiation factor IIF subunit beta [Culex
quinquefasciatus]
gi|167862525|gb|EDS25908.1| transcription initiation factor IIF subunit beta [Culex
quinquefasciatus]
Length = 280
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQS-----N 43
+WL+K P ++ LKI + ++ +++IDP +
Sbjct: 28 VWLVKVPKYIANKWEKAPGNIEVGKLKISKQVGQKAQVSLTLSDAVINIDPAEEIPRDHR 87
Query: 44 EDSSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKN 103
D S + + F + ++ +G+A D P S K+ +EG+I
Sbjct: 88 LDVSVVTKQTLGVFAHSVPASGAGSA----------DPTPES-------EKLFMEGRIVQ 130
Query: 104 KFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKK 163
K + RP+ +N Y K+ E K +RQ++ ++ + +P+ + E+KK
Sbjct: 131 KLECRPYADNC--YMKMKLESIRKASQPARQLKSLEKIVQT-FKPVSDHKHNIEEKERKK 187
Query: 164 PQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNN 223
+E K++R D+ + D++F FE+ + ++ L++ T QP +LK++LK++C YN
Sbjct: 188 -----AEGKKSRDDKNAVLDMLFNAFEKHQYYNIKDLVKITRQPISYLKEILKEVCDYNM 242
Query: 224 KGSNQGSYELKPEYK 238
K ++ +ELK EY+
Sbjct: 243 KNPHKNMWELKKEYR 257
>gi|312384124|gb|EFR28929.1| hypothetical protein AND_02541 [Anopheles darlingi]
Length = 271
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+EG+I K + RP+ +N Y K+ E K +RQI+ ++ ++ +P+ +
Sbjct: 116 MEGRIVQKLECRPYADNC--YMKMKLESIRKASQPARQIKSLEKIVHNY-KPVSDHKHNI 172
Query: 157 GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLK 216
E+KK +E K++R D+ + D++F FE+ + ++ L++ T QP +LK++LK
Sbjct: 173 EDRERKK-----AEGKKSREDKNAVLDMLFNAFEKHQYYNIKDLVKLTRQPISYLKEILK 227
Query: 217 DLCVYNNKGSNQGSYELKPEYK 238
++C YN K ++ +ELK EY+
Sbjct: 228 EVCDYNMKNPHKNMWELKKEYR 249
>gi|242005669|ref|XP_002423685.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506861|gb|EEB10947.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 58/249 (23%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P V+ + S + + V K+ + P Q + S S + +
Sbjct: 18 VWLVKVPKYVATKWEKASGNIE-------VGKLKICKQPGQKMQVELSLSEA-----VLN 65
Query: 61 LISTESGNAPKRYSMD-MSKDLIPMSVFAESS----------NGKISVEGKIKNKFDMRP 109
L N PK + +D + + + VF+ ++ + K+++EG+I K + RP
Sbjct: 66 LKEPGEENIPKDHRLDVLPVKHLTLGVFSHTAPSNLEGVIPESEKLAMEGRIVQKLECRP 125
Query: 110 HHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGS 169
+ +N Y KL E K RQ++ +D
Sbjct: 126 YADN--TYMKLKLETIRKASLPVRQVKQLD------------------------------ 153
Query: 170 EVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQG 229
R R D+ + +++F FE+ + +R L++ T+QP +LK++L ++C YN K ++
Sbjct: 154 ---RARDDKEAVLNMLFAAFEKHQYYNIRDLVKITNQPIVYLKEILNEVCNYNIKNPHKN 210
Query: 230 SYELKPEYK 238
+ELKPEY+
Sbjct: 211 MWELKPEYR 219
>gi|343429875|emb|CBQ73447.1| related to TFG2-TFIIF subunit (transcription initiation factor), 54
kD [Sporisorium reilianum SRZ2]
Length = 424
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 25 DSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPM 84
DSA + + I + + D S+SSS+ T + G KR +
Sbjct: 142 DSAATLKRNIYAFRETLQDVDPSASSSTKPDDDTDNSDDDDQGRTKKRGKTRR------I 195
Query: 85 SVFAESSNGKISVEGKIKNKFDMRPHHENM----------ENYGKLCRERTNKYMTKSRQ 134
+ + + +++ +I++ D++P + ++Y +L R+R + R
Sbjct: 196 TTLCGTVTNEAALQPQIRSAADVKPGSSSSMGLGGAAPISDSYRELLRKRREEASKPKRT 255
Query: 135 IQVIDN-DNGSHMRPMPGM----------MISTGFTEKKKPQPKGSEVKRTRRDRGEMED 183
I+++D+ D G H + G+ + + K K G K R + E+ D
Sbjct: 256 IKMLDSTDAGRHNMLVAGVGAGLANSQKSRFNAAISAKPKSAAAGGGEKFARMPKNELLD 315
Query: 184 IMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
++F LFER W+L++L ET QPE +L++ L + + +G G++ LKPEY
Sbjct: 316 LLFTLFERWQYWSLKRLRSETQQPESYLRETLTGIADLHKRGPYVGNWSLKPEY 369
>gi|402225030|gb|EJU05092.1| hypothetical protein DACRYDRAFT_98779 [Dacryopinax sp. DJM-731 SS1]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 70 PKRYSMDMSK-----DLIPMSVFAESSNGKIS--VEGKIKNKFDMRPHHENMENYGKLCR 122
PK+YS+ M + + + S E IS +EGKI + P + +Y L
Sbjct: 111 PKQYSLKMQRKTVENEFVMASKMKERERNIISTKLEGKIVHDCHAFPIMD--ASYTSLVA 168
Query: 123 ERTNKYMTKSRQIQVIDNDNGSHMR-----PMPGMMISTGF-----TEKKKPQPKGSEVK 172
R + RQ +V++++ G+ R G + TGF TEKK + +
Sbjct: 169 SRHREANAPKRQTKVLEDEGGALHRINMLAGGAGENLGTGFGNFVSTEKKAAVASSAFER 228
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R R E+ D++F LF NW++R L T QPE +L+++L+++ + G+ +
Sbjct: 229 AARMPRNELMDLLFPLFRSNDNWSIRDLRNRTRQPEAYLREVLQEIGFLHRTGTFANMWS 288
Query: 233 LKPEYKKAA 241
L P YK A
Sbjct: 289 LLPAYKGRA 297
>gi|254566865|ref|XP_002490543.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030339|emb|CAY68262.1| hypothetical protein PAS_chr1-4_0679 [Komagataella pastoris GS115]
gi|328350932|emb|CCA37332.1| transcription initiation factor TFIIF beta subunit [Komagataella
pastoris CBS 7435]
Length = 372
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 113 NMENYGKLCRERTN-KYMTKSRQIQVIDNDNGSHMRPM-PGMMISTGFT----EKKKPQP 166
N NY K+ R N +Y+ ++ ++DN G + P +M + T EKK +
Sbjct: 206 NDRNYSKVVESRKNLRYVKPKSKVTLLDNLPGVIQSNITPNLMRNKNSTFLRSEKKDRRA 265
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
+G + R + ++ D++F LF++ WTL+ L ++T QPE +LK++L+ + N KG
Sbjct: 266 EGRAI---RMPQNQLLDVLFGLFDQYEYWTLKGLREKTSQPEAYLKEVLESVAELNKKGP 322
Query: 227 NQGSYELKPEYKKAADG 243
Y LKPEYKK D
Sbjct: 323 YALRYSLKPEYKKLRDA 339
>gi|320167105|gb|EFW44004.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 70 PKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRP-HHENMENYGKLCRERTNKY 128
P +Y M + + + + F+E +G ++ EG K D+ P ++ Y RE K
Sbjct: 173 PHQYRMQILPNTLGAAAFSEDESGNLAFEGTAVQKCDVMPVLNDEYRAYLSAKRELEAKP 232
Query: 129 MTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEV-KRTRRDRGEMEDIMFK 187
+++Q+ V+ E +K + K +V KR R D+ +++D +
Sbjct: 233 KFETQQVAVV-----------------KALYEPEKQREKRRDVDKRERIDKEQLKDQITA 275
Query: 188 LFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
+FER +L+QL Q T+QP +LK +L +LC YN +G+N+ +Y+LKPE+
Sbjct: 276 VFERYQFASLQQLQQLTNQPPNYLKQVLSELCDYNTRGANRNTYQLKPEF 325
>gi|157138343|ref|XP_001657254.1| hypothetical protein AaeL_AAEL013998 [Aedes aegypti]
gi|108869504|gb|EAT33729.1| AAEL013998-PA [Aedes aegypti]
Length = 270
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 1 MWLMKCPALVSRS------------LKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSS 48
+WL+K P ++ LKI + +++ +++IDP +
Sbjct: 23 VWLVKVPKYIANKWEKAPGNIEVGKLKISKQVGQKAQVSLTLSEAVINIDPGEEIPREHK 82
Query: 49 SSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMR 108
S T+ T+ + S + K +D P K+ +EG+I + + R
Sbjct: 83 LDVSVVTKQTLGVFSHSVPSGTK-------EDGAP-------EGEKLFMEGRIVQRLECR 128
Query: 109 PHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG 168
P +N Y K+ E K +RQ++ ++ + +P+ + E+KK
Sbjct: 129 PLGDNA--YMKMKLESIRKASQPARQVKSLEK-IVHNFKPVSDHKHNIEDKERKK----- 180
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K++R D+ + D++F FE+ + ++ L++ T QP +LK++LK++C YN K ++
Sbjct: 181 AEGKKSRDDKNAVLDMLFNAFEKHQYYNIKDLVKITRQPISYLKEILKEVCDYNMKNPHK 240
Query: 229 GSYELKPEYKKAAD 242
+ELK EY+ D
Sbjct: 241 NMWELKKEYRHYKD 254
>gi|353526286|sp|Q54KT7.2|T2FB_DICDI RecName: Full=General transcription factor IIF subunit 2; AltName:
Full=ATP-dependent helicase gtf2f2; AltName:
Full=Transcription initiation factor IIF subunit beta;
Short=TFIIF-beta
Length = 241
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 83 PMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDN 142
P+ +F+E +G +++EG I + D++ E+ + Y L + R KY TK+R QVID
Sbjct: 79 PLKIFSEDKDGALALEGNIGLRCDIKIDVESPQ-YRDLMKSRHTKYNTKTRMTQVIDESE 137
Query: 143 --GSHMRPMPGMMIST-GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQ 199
+ + +ST G T Q K S K+ + E+ D++F F + + L+
Sbjct: 138 LFTPTLFDANKVKVSTVGIT-----QKKKSTDKKEKLPEDEVLDLIFSAFRAEKHLDLKT 192
Query: 200 LIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L T+QP+ LK +L+ +C+ N +G YELKPE++
Sbjct: 193 LESFTEQPKNHLKTILEKVCILNKRGPYHHLYELKPEFR 231
>gi|212545717|ref|XP_002153012.1| transcription initiation factor iif, beta subunit [Talaromyces
marneffei ATCC 18224]
gi|210064532|gb|EEA18627.1| transcription initiation factor iif, beta subunit [Talaromyces
marneffei ATCC 18224]
Length = 364
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID--NDNGSHMRPMPG 151
+ ++ GK+ ++F+ P EN E Y ++ + K + ++++ID G ++R +
Sbjct: 179 QTALVGKVADEFNCMPV-ENAE-YQRISEAKALKALEPKEKVRLIDLRQHKGPNVREVAA 236
Query: 152 MMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQF 210
+ GF ++ KP +P+ E K TRR+R + D +F LF S+W + T+QPEQ+
Sbjct: 237 GTVG-GFVQQAKPLKPRTQENKATRRERNVLLDEIFGLFREYSHWKFADIKARTNQPEQY 295
Query: 211 LKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
LK+ L+ + G ++ELKPE ++
Sbjct: 296 LKETLEMVAHLVRTGDFAMTWELKPEARE 324
>gi|449540474|gb|EMD31465.1| hypothetical protein CERSUDRAFT_119685 [Ceriporiopsis subvermispora
B]
Length = 324
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 31/188 (16%)
Query: 73 YSMDMSKDLIPMSVFA---ESSNGKIS------VEGKIKNKFDMRPHHENMENYGKLCRE 123
Y MDM + + V E G S + G++K++ ++RP E Y + +E
Sbjct: 101 YEMDMVNEAVENQVVVAEREKEPGTASRARTTILTGRVKHECNLRPVFS--ERYRQRIKE 158
Query: 124 RTNKYMTKSRQIQVIDNDNGSHMRPMPGM-----MISTGFTEKK-------KPQP-KGSE 170
R +RQI I++ +PG M+++G + K KP+P KG
Sbjct: 159 RHRVANAPARQIMRIED-------ALPGGRGNINMLTSGVSHTKPFDLVRPKPKPPKGQF 211
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
+ R R ++ D +FK F+ + +W+++ L + T QPE +LK++L ++ + G + G+
Sbjct: 212 ERMARMPRDQLLDELFKAFQEREHWSIKVLRERTQQPEAYLKEVLGEIAFLHRAGEHSGT 271
Query: 231 YELKPEYK 238
+EL YK
Sbjct: 272 WELLANYK 279
>gi|66807241|ref|XP_637343.1| TFIIF subunit [Dictyostelium discoideum AX4]
gi|60465764|gb|EAL63840.1| TFIIF subunit [Dictyostelium discoideum AX4]
Length = 248
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 83 PMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDN 142
P+ +F+E +G +++EG I + D++ E+ + Y L + R KY TK+R QVID
Sbjct: 86 PLKIFSEDKDGALALEGNIGLRCDIKIDVESPQ-YRDLMKSRHTKYNTKTRMTQVIDESE 144
Query: 143 --GSHMRPMPGMMIST-GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQ 199
+ + +ST G T Q K S K+ + E+ D++F F + + L+
Sbjct: 145 LFTPTLFDANKVKVSTVGIT-----QKKKSTDKKEKLPEDEVLDLIFSAFRAEKHLDLKT 199
Query: 200 LIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L T+QP+ LK +L+ +C+ N +G YELKPE++
Sbjct: 200 LESFTEQPKNHLKTILEKVCILNKRGPYHHLYELKPEFR 238
>gi|391326183|ref|XP_003737600.1| PREDICTED: general transcription factor IIF subunit 2-like
[Metaseiulus occidentalis]
Length = 266
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 89 ESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQI----QVIDNDNGS 144
E GKI +EG I K + RP ++ +Y L R + + R +V+ N
Sbjct: 102 ECGQGKICLEGSIVQKGECRPIGNDI-HYMDLKRRKIMEASQPKRAAIGLERVVQN---- 156
Query: 145 HMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQET 204
+P+ + + +KK +E K+ R DR ++ +++F FE+ + ++ L + T
Sbjct: 157 -FKPVARHVHQVEYEARKK-----NEGKKARGDRDQVLEMLFAAFEKHQYYNIKDLERIT 210
Query: 205 DQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
QP FLK++LK++C YN K ++ +ELKPEY+
Sbjct: 211 KQPAPFLKELLKEVCNYNVKNPHRNMWELKPEYR 244
>gi|196011287|ref|XP_002115507.1| hypothetical protein TRIADDRAFT_59521 [Trichoplax adhaerens]
gi|190581795|gb|EDV21870.1| hypothetical protein TRIADDRAFT_59521 [Trichoplax adhaerens]
Length = 256
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 16/239 (6%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P VS++ + S + + L+++ +++SS ++ +
Sbjct: 17 VWLLKVPKFVSQAWQKSESGKVGSVKIQKKGPNEEMLFLLENSLTTATSSGEANIPTEYK 76
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
L+S E G +Y + + + L + A S+ + + GK+ K D+R +E M Y L
Sbjct: 77 LVSNECG----QYQVALKRSLSIDN--AADSSTEPEIVGKVVRKIDLRALNERM--YLNL 128
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGE 180
R +T + RQ + + ++ RP+ + E + P K E KR R DR
Sbjct: 129 KRRKTELAKSPRRQPKFLSQVVNTY-RPV------SDHVELRVPVQKKEEGKRARADRDH 181
Query: 181 MEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN-QGSYELKPEYK 238
+++++F FE+ ++L+ L T QP +LK ++ ++ +N K + +ELKPEY+
Sbjct: 182 VKEMLFAAFEKHQYYSLKSLADITQQPVMYLKGIMHEIGQFNTKEKRYRNLWELKPEYR 240
>gi|393221663|gb|EJD07148.1| transcription initiation factor IIF, beta subunit [Fomitiporia
mediterranea MF3/22]
Length = 334
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 73 YSMDMSKDLIP-MSVFAESSNGKIS------VEGKIKNKFDMRPHHENMENYGKLCRERT 125
Y +DM + + V AES+ + S + G++K++ +RP + Y + R RT
Sbjct: 108 YDLDMVNESVENQIVVAESTPTQGSRVRSTILTGRVKHECSLRPKLTDA--YRRRVRMRT 165
Query: 126 NKYMTKSRQIQVIDNDNGSHMRPM----PGMMI-STGFTEKKKPQPK---GSEVKRTRRD 177
T R +++D + M GM S+ F+ KP+PK G+ + R
Sbjct: 166 ITANTPKRSAKIMDEAEAGGVGRMNRLGSGMATPSSAFSNLVKPKPKPAKGTYERFARIP 225
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
R ++ D++F L+ + W+ + L T+QPE +LK++L + + G G YELKP +
Sbjct: 226 RNQLLDMLFALYRERPRWSAKDLRSRTEQPEAYLKEVLNGIADLHRSGEFNGMYELKPNF 285
Query: 238 K 238
+
Sbjct: 286 R 286
>gi|426215262|ref|XP_004001893.1| PREDICTED: general transcription factor IIF subunit 2-like [Ovis
aries]
Length = 257
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 118/244 (48%), Gaps = 27/244 (11%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
MWL+K P +S+ S + V K+ ++ +N+ S S + + T +
Sbjct: 26 MWLVKVPKYLSQQWSEASGSGE-------VGKLKIA-----TNQGKSEISFTLNKELT-D 72
Query: 61 LISTESGNAP------KRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENM 114
+ T+ AP ++ + + + ++V E + + S++G + ++ + RP
Sbjct: 73 IRGTDGQPAPVHAPTEHQFLLQTDRGQV-LTVLTEHAPDQFSLQGTVVHRGECRP--APS 129
Query: 115 ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRT 174
ENY +L R + +R +Q ++ ++ +P+ + + ++KK KR
Sbjct: 130 ENYMRLKRMQIEGASKPARTVQKLEKVVTTNYKPVANHQYNIEYEKRKK-----ETGKRV 184
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
+ D+ ++ ++F FE+ + ++ L+ T QP +LK++L ++ V N KG ++ ++ELK
Sbjct: 185 KADKDQVLTLLFAAFEKHQYYNIKDLVGITMQPVVYLKEILNEIGVRNVKGPHKNTWELK 244
Query: 235 PEYK 238
EY+
Sbjct: 245 EEYR 248
>gi|47199299|emb|CAF89231.1| unnamed protein product [Tetraodon nigroviridis]
Length = 146
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 50/72 (69%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K SE K R +R + D++F FE+ ++ +++L+ T QP +LK++LK++ YNNKG
Sbjct: 74 KKSEGKMVRAERQAVLDMLFSAFEKHQHYNIKELVDITKQPVTYLKEILKEIGTYNNKGP 133
Query: 227 NQGSYELKPEYK 238
++ ++E+KPEY+
Sbjct: 134 HKSTWEVKPEYR 145
>gi|409081467|gb|EKM81826.1| hypothetical protein AGABI1DRAFT_112060 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 369
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+ G+IK++ ++RP ENY K RER K TK RQI++I++ S R + S
Sbjct: 179 LTGRIKHECNLRPSF--TENYRKQMRERHIKANTKQRQIRMIEDAGVSGGRGGINRLSSG 236
Query: 157 G-----------FTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETD 205
++KP KG + R R ++ D +F F +W LR L +T
Sbjct: 237 VGVGSGGAFRDLIKTRQKPA-KGGFERMARIPRNQLLDQLFSHFRDTPHWGLRPLRDKTQ 295
Query: 206 QPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
QPE +LKD+L ++ + G G +ELK +K
Sbjct: 296 QPEAYLKDVLSEIAFLHRSGEFNGMWELKENFK 328
>gi|426196707|gb|EKV46635.1| hypothetical protein AGABI2DRAFT_193303 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+ G+IK++ ++RP ENY K RER K TK RQI++I++ S R + S
Sbjct: 179 LTGRIKHECNLRPSF--TENYRKQMRERHIKANTKQRQIRMIEDAGVSGGRGGINRLSSG 236
Query: 157 G-----------FTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETD 205
++KP KG + R R ++ D +F F +W LR L +T
Sbjct: 237 VGVGSGGAFRDLIKTRQKPA-KGGFERMARIPRNQLLDQLFSHFRDTPHWGLRPLRDKTQ 295
Query: 206 QPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
QPE +LKD+L ++ + G G +ELK +K
Sbjct: 296 QPEAYLKDVLSEIAFLHRSGEFNGMWELKENFK 328
>gi|242820387|ref|XP_002487500.1| transcription initiation factor iif, beta subunit [Talaromyces
stipitatus ATCC 10500]
gi|218713965|gb|EED13389.1| transcription initiation factor iif, beta subunit [Talaromyces
stipitatus ATCC 10500]
Length = 363
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID--NDNGSHMRPMPG 151
+ ++ GK+ ++F+ P EN E Y ++ + K + ++++ID G ++R +
Sbjct: 179 QTALVGKVADEFNCMPV-ENAE-YQRISEAKALKALEPREKVRLIDLRQHKGPNVREVAA 236
Query: 152 MMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQF 210
+ GF ++ KP + + E K TRR+R + D +F LF S+W + T+QPEQ+
Sbjct: 237 GTVG-GFVQQAKPAKARTQENKATRRERNVLLDEIFGLFREYSHWKFADIKARTNQPEQY 295
Query: 211 LKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
LK+ L+ + G ++ELKPE ++A
Sbjct: 296 LKETLEMVAHLVRTGDFAMTWELKPEAREA 325
>gi|380020787|ref|XP_003694260.1| PREDICTED: general transcription factor IIF subunit 2-like [Apis
florea]
Length = 271
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P ++ K P + V K+ ++ +P Q E S S + +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE--------VGKLKITKNPGQKAEVSLRLSEA-----VL 67
Query: 60 ELISTESGNAPKRYSMDMSKDLIPM-SVFAESS-----------NGKISVEGKIKNKFDM 107
L PK++ +D++ M VF+ + K+ +EG+I K +
Sbjct: 68 ALKEPGEEEIPKQHRLDVTTVTKQMLGVFSHVTPSSSSDSIVPETEKLYMEGRIVQKLEC 127
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP+ +N Y KL + + RQ+Q +D + +P+ + + EKKK
Sbjct: 128 RPYADNC--YMKLKLQSIKRASVPQRQVQQLDR-VVQNFKPVSDHKHNIEYAEKKK---- 180
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
+E K+ R D+ + D++F FE+ + +R L++ T QP +LK++L ++C YN K +
Sbjct: 181 -AEGKKMRDDKDAVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYNLKNPH 239
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 240 RNMWELKPEYR 250
>gi|383858209|ref|XP_003704594.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
1 [Megachile rotundata]
Length = 272
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 34/251 (13%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P ++ K P + V K+ ++ +P Q E S S + +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE--------VGKLKITKNPGQKAEVSLKLSEA-----VL 67
Query: 60 ELISTESGNAPKRYSMDMSKDLIPM-SVFAESS-----------NGKISVEGKIKNKFDM 107
L PK++ +D++ M VF+ + K+ +EG+I K +
Sbjct: 68 ALKEPGEEEIPKQHRLDVTTVTKQMLGVFSHVTPSTSSDSIVPETEKLYMEGRIVQKLEC 127
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP+ +N Y KL + + RQ+Q +D ++ +P+ + + EKKK
Sbjct: 128 RPYADNC--YMKLKLQSIKRASVPQRQVQQLDRVVQNY-KPVSDHKHNIEYAEKKK---- 180
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
+E K+ R D+ + D++F FE+ + +R L++ T QP +LK++L ++C YN K +
Sbjct: 181 -AEGKKMRDDKDTVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYNLKNPH 239
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 240 RNMWELKPEYR 250
>gi|340719856|ref|XP_003398361.1| PREDICTED: general transcription factor IIF subunit 2-like [Bombus
terrestris]
Length = 271
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P ++ K P + V K+ ++ +P Q E S S + +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE--------VGKLKITKNPGQKAEVSLRLSEA-----VL 67
Query: 60 ELISTESGNAPKRYSMDMSKDLIPM-SVFAESS-----------NGKISVEGKIKNKFDM 107
L PK++ +D++ M VF+ + K+ +EG+I K +
Sbjct: 68 ALKEPGEEEIPKQHRLDVTTVTKQMLGVFSHVTPSSSSDSIVPETEKLYMEGRIVQKLEC 127
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP+ +N Y KL + + RQ+Q +D + +P+ + + EKKK
Sbjct: 128 RPYADNC--YMKLKLQSIKRASVPQRQVQQLDR-VVQNFKPVSDHKHNIEYAEKKK---- 180
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
+E K+ R D+ + D++F FE+ + +R L++ T QP +LK++L ++C YN K +
Sbjct: 181 -AEGKKMRDDKDAVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYNLKNPH 239
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 240 RNMWELKPEYR 250
>gi|118778639|ref|XP_308768.3| AGAP007002-PA [Anopheles gambiae str. PEST]
gi|116132481|gb|EAA04044.3| AGAP007002-PA [Anopheles gambiae str. PEST]
Length = 272
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+EG+I K + RP+ ++ Y K+ E K +RQ++ ++ ++ +P+ +
Sbjct: 116 MEGRIVQKLECRPYADHC--YMKMKLESIRKASQPARQVKSLEKIVHNY-KPVSDHKHNI 172
Query: 157 GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLK 216
E+KK +E K++R D+ + D++F FE+ + ++ L++ T QP +LK++LK
Sbjct: 173 EDRERKK-----AEGKKSRDDKNAVLDMLFNAFEKHQYYNIKDLVRITRQPISYLKEILK 227
Query: 217 DLCVYNNKGSNQGSYELKPEYK 238
++C YN K ++ +ELK EY+
Sbjct: 228 EVCDYNMKNPHKNMWELKKEYR 249
>gi|66564899|ref|XP_623868.1| PREDICTED: general transcription factor IIF subunit 2 isoform 1
[Apis mellifera]
Length = 271
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P ++ K P + V K+ ++ +P Q E S S + +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE--------VGKLKITKNPGQKAEVSLRLSEA-----VL 67
Query: 60 ELISTESGNAPKRYSMDMSKDLIPM-SVFAESS-----------NGKISVEGKIKNKFDM 107
L PK++ +D++ M VF+ + K+ +EG+I K +
Sbjct: 68 ALKEPGEEEIPKQHRLDVTTVTKQMLGVFSHVTPSSSSDSIVPETEKLYMEGRIVQKLEC 127
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP+ +N Y KL + + RQ+Q +D + +P+ + + EKKK
Sbjct: 128 RPYADNC--YMKLKLQSIKRASVPQRQVQQLDR-VVQNFKPVSDHKHNIEYAEKKK---- 180
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
+E K+ R D+ + D++F FE+ + +R L++ T QP +LK++L ++C YN K +
Sbjct: 181 -AEGKKMRDDKDAVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYNLKNPH 239
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 240 RNMWELKPEYR 250
>gi|307203229|gb|EFN82384.1| General transcription factor IIF subunit 2 [Harpegnathos saltator]
Length = 272
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 36/252 (14%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL+K P ++ + + + V K+ ++ +P Q E S S +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE-------VGKLKITKNPGQKAEVSLRLSEAV------- 66
Query: 61 LISTESGN--APKRYSMDMSKDLIP-MSVFAESS-----------NGKISVEGKIKNKFD 106
L ESG PK++ +D++ + VF+ + KI +EG+I K +
Sbjct: 67 LALKESGEEEIPKQHRLDVTTVTTQILGVFSHVTPSTSSDAIVPETEKIFMEGRIVQKLE 126
Query: 107 MRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQP 166
RP+ +N Y KL E + RQ+Q +D + +P+ + + EKKK
Sbjct: 127 CRPYADNC--YMKLKLESIKRASVPQRQVQQLDRV-VQNFKPVSDHKHNIEYAEKKK--- 180
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
+E K+ R D+ + ++F FER + ++ L++ T QP +LK++L ++C YN K
Sbjct: 181 --AEGKKMRDDKEAVLGMLFAAFERHQYYNIKDLVKITRQPIVYLKEILNEVCNYNLKNP 238
Query: 227 NQGSYELKPEYK 238
++ +ELKPEY+
Sbjct: 239 HRNMWELKPEYR 250
>gi|350416874|ref|XP_003491146.1| PREDICTED: general transcription factor IIF subunit 2-like [Bombus
impatiens]
Length = 271
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P ++ K P + V K+ ++ +P Q E S S + +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE--------VGKLKITKNPGQKAEVSLRLSEA-----VL 67
Query: 60 ELISTESGNAPKRYSMDMSKDLIPM-SVFAESS-----------NGKISVEGKIKNKFDM 107
L PK++ +D++ M VF+ + K+ +EG+I K +
Sbjct: 68 ALKEPGEEEIPKQHRLDVTTVTKQMLGVFSHVTPSSSSDSIVPETEKLYMEGRIVQKLEC 127
Query: 108 RPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
RP+ +N Y KL + + RQ+Q +D + +P+ + + EKKK
Sbjct: 128 RPYADNC--YMKLKLQSIKRASVPQRQVQQLDR-VVQNFKPVSDHKHNIEYAEKKK---- 180
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
+E K+ R D+ + D++F FE+ + +R L++ T QP +LK++L ++C YN K +
Sbjct: 181 -AEGKKMRDDKDAVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYNLKNPH 239
Query: 228 QGSYELKPEYK 238
+ +ELKPEY+
Sbjct: 240 RNMWELKPEYR 250
>gi|443721667|gb|ELU10906.1| hypothetical protein CAPTEDRAFT_544 [Capitella teleta]
Length = 211
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 90 SSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPM 149
SSN ++S+EGK+ + + +P ++ NY L R +RQ+ +D + +
Sbjct: 60 SSNEELSLEGKVIQRAECKPVADS--NYMALKRSSFETSNNPARQVVHLDK---AVLNYK 114
Query: 150 PGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
P + S KP+ + KR R D+ + +++F FE+ + L+ L++ TDQP
Sbjct: 115 PKSIHSAMVEMDNKPK----DQKRMRMDKDRVMEMLFSAFEKHQYYNLKDLVKITDQPVV 170
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKKAAD 242
FLK++L+++ YN K ++ +ELK E++ D
Sbjct: 171 FLKEILREIGNYNMKAPHKNMWELKSEFRHYKD 203
>gi|19073998|ref|NP_584604.1| TRANSCRIPTION INITIATION FACTOR TFIIF BETA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
gi|19068640|emb|CAD25108.1| TRANSCRIPTION INITIATION FACTOR TFIIF BETA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
Length = 228
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL K P ++ + S + + I L+ + +S+ + S R + E
Sbjct: 12 IWLAKVPLFLAERILGQSREAE--------------IGELEITKATSTEPAVLSLRLSKE 57
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
G P + + + M V N VEG I N+ + P E E Y +
Sbjct: 58 FCV---GGFPSSFDVKIKPRDNNMYVIRTHENNA-DVEGMINNECYITP--EVNEEYLRY 111
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGE 180
R+ K +K +QVID G + + +K+ + + KR R + E
Sbjct: 112 KRDVGFKSDSKKSDVQVIDYLKEGKRGEKFGSLRELEYLARKRKKMLMDK-KRERLGKNE 170
Query: 181 MEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
+ D++FK FE+ +WT++ L QP F+++++ D+CV N K + +YEL+PEYK+
Sbjct: 171 VIDMVFKAFEKYPSWTVKDLADFCGQPVAFIQEIVSDICVLNKKDL-KNTYELRPEYKQ 228
>gi|432851971|ref|XP_004067132.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
1 [Oryzias latipes]
Length = 267
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 26/178 (14%)
Query: 84 MSVFAESSNG------------------KISVEGKIKNKFDMRPHHENMENYGKLCRERT 125
++VF ESS+G KI++EG + + + RP E+Y KL R +
Sbjct: 93 LAVFTESSSGQSEERSDGSSSGAGSGPDKIALEGVVVQRAECRPAVS--ESYMKLKRLQI 150
Query: 126 NKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIM 185
+ SR Q + ++ +P ++ ++ + K E KR R D+ ++ +++
Sbjct: 151 EESSKPSRLSQQLSKPV-TNYKP-----VANHEYNREYEKKKKEEGKRARADKQQVLEML 204
Query: 186 FKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
F FE+ + ++ L+ T QP +LK++L+D+ +YN KG+++ ++ELKPEY+ G
Sbjct: 205 FSAFEKHQYYNIKDLVDITKQPVIYLKEILRDIGIYNVKGTHKNTWELKPEYRHYQPG 262
>gi|429966047|gb|ELA48044.1| hypothetical protein VCUG_00467 [Vavraia culicis 'floridensis']
Length = 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 62 ISTESGNAPKRYSMDMSKDLIPMSV---FAESSN------GKISVEGKIKNKFDMRPHHE 112
IST + +AP + S+ ++ +P++ F E S G +EGK+ + + P +
Sbjct: 83 ISTATSDAPAQVSIGITLSDVPLNFTIRFNEISQPMYVLKGNDRIEGKVVKEVFVNPVFD 142
Query: 113 NMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVK 172
N K E + ++ I + + + S KK+ Q + K
Sbjct: 143 NAYLEFKKMEEVSAAAQPSTQIIDYMKEGRKTDRFGTVSELESLARRRKKQLQSQ----K 198
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R R +R E+ D++FK FE+ +WT + L + QP +++++L ++ V N K ++ SY
Sbjct: 199 RERLERNEVMDMVFKAFEKFDSWTAKDLADFSGQPVAYIQEILGEIAVLNKK-DHRNSYS 257
Query: 233 LKPEYKKAADGPA 245
LKPEYK+A+D A
Sbjct: 258 LKPEYKEASDEDA 270
>gi|302679342|ref|XP_003029353.1| hypothetical protein SCHCODRAFT_78184 [Schizophyllum commune H4-8]
gi|300103043|gb|EFI94450.1| hypothetical protein SCHCODRAFT_78184 [Schizophyllum commune H4-8]
Length = 364
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDN---DNGSHMRPMPGMM 153
+ G++K++ MRP Y R R+ + R + ID D G+ R G
Sbjct: 171 LTGRLKHECTMRPAFN--AKYRNQMRMRSMYHNAPRRATKHIDESGLDKGAVSRLNTGGS 228
Query: 154 I---STGF-TEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+ S F + KP+ KG + R R E+ D++F LF+ Q W L+ L + T QPE
Sbjct: 229 LGGPSGAFDFGRPKPKAKGQFERMARMPRNELLDMLFNLFKEQPYWALKPLRERTQQPEA 288
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELK 234
+LK++L D+ + G + GS+ELK
Sbjct: 289 YLKEVLNDVATLHRSGEHNGSWELK 313
>gi|383858211|ref|XP_003704595.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
2 [Megachile rotundata]
Length = 277
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 39/256 (15%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P ++ K P + V K+ ++ +P Q E S S + +
Sbjct: 21 VWLVKVPKYIANKWEKAPGNIE--------VGKLKITKNPGQKAEVSLKLSEA-----VL 67
Query: 60 ELISTESGNAPKRYSMDMS---KDLIPMSVFAESS--------------NGKISVEGKIK 102
L PK++ +D++ K ++ +F + + K+ +EG+I
Sbjct: 68 ALKEPGEEEIPKQHRLDVTTVTKQMLDALLFHKCNFWLASTSSDSIVPETEKLYMEGRIV 127
Query: 103 NKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKK 162
K + RP+ +N Y KL + + RQ+Q +D ++ +P+ + + EKK
Sbjct: 128 QKLECRPYADNC--YMKLKLQSIKRASVPQRQVQQLDRVVQNY-KPVSDHKHNIEYAEKK 184
Query: 163 KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYN 222
K +E K+ R D+ + D++F FE+ + +R L++ T QP +LK++L ++C YN
Sbjct: 185 K-----AEGKKMRDDKDTVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYN 239
Query: 223 NKGSNQGSYELKPEYK 238
K ++ +ELKPEY+
Sbjct: 240 LKNPHRNMWELKPEYR 255
>gi|449329311|gb|AGE95584.1| transcription initiation factor tfIIf beta subunit [Encephalitozoon
cuniculi]
Length = 228
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTME 60
+WL K P ++ + S + + + L+ + +S+ + S R + E
Sbjct: 12 IWLAKVPLFLAERILGQSREAE--------------VGELEITKATSTEPAVLSLRLSKE 57
Query: 61 LISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKL 120
G P + + + M V N VEG I N+ + P E E Y +
Sbjct: 58 FCV---GGFPSSFDVKIKPRDNNMYVIRTHENNA-DVEGMINNECYITP--EVNEEYLRY 111
Query: 121 CRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGE 180
R+ K +K +QVID G + + +K+ + + KR R + E
Sbjct: 112 KRDVGFKSDSKKSDVQVIDYLKEGKRGEKFGSLRELEYLARKRKKMLMDK-KRERLGKNE 170
Query: 181 MEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
+ D++FK FE+ +WT++ L QP F+++++ D+CV N K + +YEL+PEYK+
Sbjct: 171 VIDMVFKAFEKYPSWTVKDLADFCGQPVAFIQEIVSDICVLNKKDL-KNTYELRPEYKQ 228
>gi|296481326|tpg|DAA23441.1| TPA: general transcription factor IIF, polypeptide 2, 30kDa-like
[Bos taurus]
Length = 118
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 136 QVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNW 195
Q +D ++ +P+ + + KKK + KR R D+ + D++F FE+ +
Sbjct: 12 QQLDKVVTTNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYY 66
Query: 196 TLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L+ L+ T QP +LKD+LK++ V N KG ++ ++ELKPEY+
Sbjct: 67 NLKDLVDITKQPVSYLKDILKEIGVQNVKGIHKNTWELKPEYR 109
>gi|328857693|gb|EGG06808.1| hypothetical protein MELLADRAFT_77731 [Melampsora larici-populina
98AG31]
Length = 356
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
V GKI ++ + P ++Y + R R K R I+ ++ D G+ R G+
Sbjct: 155 VTGKIMHECLVSPVIN--DSYRAVMRARQQKASQPKRTIKRVNEDVGTLNRMASGISTQV 212
Query: 157 ------GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQF 210
FT P K +E K TR R E+ D +F F R W+++ L +T QPE +
Sbjct: 213 QANKFAAFTRAAGPSTKSTE-KFTRMPRTELLDALFAGFLRYEYWSMKSLRDQTKQPEAY 271
Query: 211 LKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
L+++L D+ G G + LKP+Y +
Sbjct: 272 LREVLSDIATLLKAGPYVGHWVLKPQYAQ 300
>gi|296488873|tpg|DAA30986.1| TPA: hypothetical protein LOC511494 [Bos taurus]
gi|440898074|gb|ELR49646.1| hypothetical protein M91_07858 [Bos grunniens mutus]
Length = 257
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 118/245 (48%), Gaps = 29/245 (11%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
MWL+K P +S+ + P S V K+ ++ +N+ S S + + T
Sbjct: 26 MWLVKVPKYLSQQWSEAPGSGE--------VGKLKIA-----TNQGKSEISFTLNKELT- 71
Query: 60 ELISTESGNAP------KRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHEN 113
++ T+ AP ++ + + + ++V E + S++G + ++ + RP
Sbjct: 72 DIRGTDGQPAPVHAPTEHQFLLQTDRGQV-LTVLTEHEPDQFSLQGTVVHRGECRP--AP 128
Query: 114 MENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKR 173
ENY +L R + +R +Q ++ ++ +P+ + + ++KK KR
Sbjct: 129 SENYMRLKRMQIEGASKPARTVQKLEKVVTTNYKPVANHQYNIEYEKRKK-----ETGKR 183
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
+ D+ ++ ++F FE+ + ++ L+ T QP +LK++L ++ V N KG ++ ++EL
Sbjct: 184 VKADKDQVLTLLFAAFEKHQYYNIKDLVGITMQPVVYLKEILNEIGVRNVKGPHKNTWEL 243
Query: 234 KPEYK 238
K EY+
Sbjct: 244 KEEYR 248
>gi|154152057|ref|NP_001093809.1| uncharacterized protein LOC511494 [Bos taurus]
gi|151554352|gb|AAI49620.1| LOC511494 protein [Bos taurus]
Length = 257
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 118/244 (48%), Gaps = 27/244 (11%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
MWL+K P +S+ + P S V K+ ++ +N+ S S + + T
Sbjct: 26 MWLVKVPKYLSQQWSEAPGSGE--------VGKLKIA-----TNQGKSEISFTLNKELT- 71
Query: 60 ELISTE----SGNAPKRYSMDMSKDL-IPMSVFAESSNGKISVEGKIKNKFDMRPHHENM 114
++ T+ S +AP + + D ++V E + S++G + ++ + RP
Sbjct: 72 DIRGTDGQPASVHAPMEHQFLLQTDRGQVLTVLTEHEPDQFSLQGTVVHRGECRP--APS 129
Query: 115 ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRT 174
ENY +L R + +R +Q ++ ++ +P+ + + ++KK KR
Sbjct: 130 ENYMRLKRMQIEGASKPARTVQKLEKVVTTNYKPVANHQYNIEYEKRKK-----ETGKRV 184
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
+ D+ ++ ++F FE+ + ++ L+ T QP +LK++L ++ V N KG ++ ++ELK
Sbjct: 185 KADKDQVLTLLFAAFEKHQYYNIKDLVGITMQPVVYLKEILNEIGVRNVKGPHKNTWELK 244
Query: 235 PEYK 238
EY+
Sbjct: 245 EEYR 248
>gi|358423064|ref|XP_003585581.1| PREDICTED: general transcription factor IIF subunit 2-like [Bos
taurus]
Length = 257
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 118/245 (48%), Gaps = 29/245 (11%)
Query: 1 MWLMKCPALVSRSL-KIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
MWL+K P +S+ + P S V K+ ++ +N+ S S + + T
Sbjct: 26 MWLVKVPKYLSQQWSEAPGSGE--------VGKLKIA-----TNQGKSEISFTLNKELT- 71
Query: 60 ELISTESGNAP------KRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHEN 113
++ T+ AP ++ + + + ++V E + S++G + ++ + RP
Sbjct: 72 DVRGTDGQPAPVHAPTEHQFLLQTDRGQV-LTVLTEHEPDQFSLQGTVVHRGECRP--AP 128
Query: 114 MENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKR 173
ENY +L R + +R +Q ++ ++ +P+ + + ++KK KR
Sbjct: 129 SENYMRLKRMQIEGASKPARTVQKLEKVVTTNYKPVANHQYNIEYEKRKK-----ETGKR 183
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
+ D+ ++ ++F FE+ + ++ L+ T QP +LK++L ++ V N KG ++ ++EL
Sbjct: 184 VKADKDQVLTLLFAAFEKHQYYNIKDLVGITMQPVVYLKEILNEIGVRNVKGPHKNTWEL 243
Query: 234 KPEYK 238
K EY+
Sbjct: 244 KEEYR 248
>gi|198423704|ref|XP_002119394.1| PREDICTED: similar to RAP30 [Ciona intestinalis]
Length = 252
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 1 MWLMKCPA-LVSRSLKIPSSDND-----DDDSARPVAKVILSIDPLQSNEDSSSSSSSSS 54
+WL+K P L ++ L P + ++ R A+V S+D + +SS ++
Sbjct: 18 VWLVKVPKYLATQWLNAPDGMSVGKLRITKNAGR--AEVTYSMDKNLTQANSSEKFLATD 75
Query: 55 TRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENM 114
+F ++ +S ++VF+ ++ K ++EG++ K D RP +
Sbjct: 76 HKFVLQGTCGQS-----------------LAVFSTTTGEKRAMEGRVVQKVDCRPIVSH- 117
Query: 115 ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRT 174
NY +L R + + R + + + +P+ + + KK KG K+
Sbjct: 118 -NYMQLKRAQMIEASKPQRTTKQLAEAVKTVYKPVTKIKEQIEYDAMKKE--KG---KKM 171
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
R D+ ++ I+F FE+ + ++ L T QP FLK++L+++ +YN ++ +ELK
Sbjct: 172 RVDKDVLQSILFNAFEKHQYYNIKDLQNITQQPVPFLKEVLREIGMYNKHPGHRHMWELK 231
Query: 235 PEYK 238
PEY+
Sbjct: 232 PEYR 235
>gi|443898632|dbj|GAC75966.1| transcription initiation factor IIF, small subunit [Pseudozyma
antarctica T-34]
Length = 401
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 13/116 (11%)
Query: 133 RQIQVIDN-DNGSHMRPMPGMMISTGFTEKK---------KPQPKGSEVKR-TRRDRGEM 181
R I+++D+ D G H + G + G +K KP+ G+ ++ R + E+
Sbjct: 241 RTIKMLDSADAGRHNMLVAG--VGAGLHSQKSRFNAAIATKPKATGAGTEKFARMPKNEL 298
Query: 182 EDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
D++F LFER W+L++L ET QPE +L++ L + + +G G++ LKPEY
Sbjct: 299 LDLLFALFERWQYWSLKKLRTETQQPESYLRETLTGIADLHKRGPYVGNWSLKPEY 354
>gi|358056590|dbj|GAA97559.1| hypothetical protein E5Q_04237 [Mixia osmundae IAM 14324]
Length = 399
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 99 GKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM----- 153
G++ ++ RP E+ + Y + R+R R +Q ++ D + R G +
Sbjct: 180 GRVAHECQARPDFES-DVYRAIIRKRIEVAEKPKRVVQALNEDMATSNRLASGALRLKQS 238
Query: 154 ISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKD 213
+ T K +P+ ++ K R R E+ D + LF W+LR + + QP+ +LK+
Sbjct: 239 LMTPSLVKARPK-TAADQKLARAPRAEVTDQIMALFSTHEYWSLRNIKERIAQPDAWLKE 297
Query: 214 MLKDLCVYNNKGSNQGSYELKPEYKKAADGPA 245
++ D+ + N G G Y L P +K A A
Sbjct: 298 IMTDVAIMNASGPYAGLYSLAPAFKSLAAAKA 329
>gi|281349943|gb|EFB25527.1| hypothetical protein PANDA_002952 [Ailuropoda melanoleuca]
Length = 123
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 136 QVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNW 195
Q +D ++ +P+ + + KKK + KR R D+ + D++F FE+ +
Sbjct: 17 QQLDKVVTTNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYY 71
Query: 196 TLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L+ L+ T QP +LK++LK++ V N KG+++ ++ELKPEY+
Sbjct: 72 NLKDLVDITKQPVGYLKEILKEIGVQNVKGTHKNTWELKPEYR 114
>gi|401825424|ref|XP_003886807.1| transcription initiation factor IIF small subunit [Encephalitozoon
hellem ATCC 50504]
gi|392997963|gb|AFM97826.1| transcription initiation factor IIF small subunit [Encephalitozoon
hellem ATCC 50504]
Length = 228
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
VEG I N+ + P E E Y K ++ K TK +QVID G +
Sbjct: 90 VEGMINNECYITP--EINEEYLKYKKDAGFKSDTKKGDVQVIDYLKEGKRGEKFGSLREL 147
Query: 157 GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLK 216
+ +K+ + + KR R + E+ D++FK FE+ +WT++ L QP F+++++
Sbjct: 148 EYLARKRKKMLMDK-KRERLGKNEVIDMVFKAFEKYPSWTVKDLADFCGQPVAFIQEIVS 206
Query: 217 DLCVYNNKGSNQGSYELKPEYKK 239
D+CV N K + +YEL+PEYK+
Sbjct: 207 DICVLNKKDL-KNTYELRPEYKQ 228
>gi|443920503|gb|ELU40411.1| transcription initiation factor IIF, beta subunit domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 298
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSAR-------PVAKVILSIDPLQSNEDSSSSSSSS 53
+WL+K P V S D +D + R PV +++LS DP S S
Sbjct: 39 VWLVKVPRTVMESWMRIDKDGEDLGTLRVYHETEPPVIQLLLSNDP-------SLKESLR 91
Query: 54 STRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHEN 113
FT+ T + PK ++F S I + + K RP
Sbjct: 92 GAVFTL----TPTAVRPK-------------NMFVISETTPIQTDMR-KTAIIKRPT-AI 132
Query: 114 MENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTE--KKKPQPKGSEV 171
+ +L K RQ+ ID+ N + G F+ K+KP+P +
Sbjct: 133 LTVGSRLFNIAFTKANEPRRQLIQIDDGNAQIKKIASGAGHLGNFSNMVKQKPKPAAGQF 192
Query: 172 KRTRR-DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
+R R + E+ D++FKLF QS+W+++ L + T QP +LK+ L+++ + + G + +
Sbjct: 193 ERAARIPKNELLDMLFKLFMVQSHWSMKVLRERTKQPLDYLKETLEEIAILHKSGPHTNT 252
Query: 231 YELKPEYKKAADGP 244
+ L+ Y + P
Sbjct: 253 WSLQASYAQQFGAP 266
>gi|388853672|emb|CCF52640.1| related to TFG2-TFIIF subunit (transcription initiation factor), 54
kD [Ustilago hordei]
Length = 445
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
G K R + E+ D++F LFER W+L++L ET QPE +L+++L + + +G
Sbjct: 312 GGGEKFARMPKNELLDMLFALFERWQYWSLKKLRAETQQPESYLREVLTGIADLHKRGPY 371
Query: 228 QGSYELKPEYKKA 240
G++ LKPEY A
Sbjct: 372 VGNWSLKPEYSSA 384
>gi|358332274|dbj|GAA31513.2| transcription initiation factor TFIIF subunit beta [Clonorchis
sinensis]
Length = 330
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K +E K RR++ ++ +FK FER +T+R LI T QP +L ++LK++ ++N +
Sbjct: 244 KRAEGKNLRREKDDVMQDLFKAFERHQYYTIRDLILLTKQPVTYLTEILKEIAIFNPRAP 303
Query: 227 NQGSYELKPEYKKAA 241
++ +ELKPEY+ A
Sbjct: 304 HKNMWELKPEYRHYA 318
>gi|392563992|gb|EIW57170.1| hypothetical protein TRAVEDRAFT_168775 [Trametes versicolor
FP-101664 SS1]
Length = 318
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 70 PKRYSMDM-SKDLIPMSVFAE-------SSNGKISV-EGKIKNKFDMRPHHENMENYGKL 120
P Y MDM + D+ V AE +S + ++ G +K++ +MRP E Y +
Sbjct: 97 PDEYEMDMVNHDVENQIVIAEREKEPGTASRARTTILTGSVKHECNMRP--TLTERYRRQ 154
Query: 121 CRERTNKYMTKSRQIQVIDNDN----GSHMRPMPGMMISTGFT-EKKKPQPKGSEVKR-T 174
+ER R I++ + G G GF K KP+P+ + +R
Sbjct: 155 LKERNRAANAPKRTTMRIEDAHPGGRGEINMLTSGAKNHAGFNLVKAKPKPQKGQFERMA 214
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
R R ++ D +F+ F+ + W+++ L + T QPE +LK++L ++ + G GS+EL
Sbjct: 215 RMPRDQLLDELFRAFQERERWSIKVLRERTQQPEAYLKEVLSEIAFLHRSGEFNGSWELL 274
Query: 235 PEYK 238
YK
Sbjct: 275 ANYK 278
>gi|396080925|gb|AFN82545.1| transcription initiation factor TFIIF subunit beta [Encephalitozoon
romaleae SJ-2008]
Length = 228
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
VEG I N+ + P E E Y K ++ K K +QVID G +
Sbjct: 90 VEGMINNECYITP--EINEEYLKYKKDAGFKSSAKKGDVQVIDYLKEGKRGEKFGSLREL 147
Query: 157 GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLK 216
+ +K+ + + KR R + E+ D++FK FE+ +WT++ L QP F+++++
Sbjct: 148 EYLARKRKKMLMDK-KRERLGKNEVIDMVFKAFEKYPSWTVKDLADFCGQPVAFIQEIVS 206
Query: 217 DLCVYNNKGSNQGSYELKPEYKK 239
D+CV N K + +YEL+PEYK+
Sbjct: 207 DICVLNKKDL-KNTYELRPEYKQ 228
>gi|403168797|ref|XP_003328399.2| hypothetical protein PGTG_09693 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167664|gb|EFP83980.2| hypothetical protein PGTG_09693 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 357
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 92 NGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPG 151
+G I+ E ++ D +NY + R R K R I+ ++ D G+ R G
Sbjct: 154 SGTIAHECQVAPVLD--------DNYRAVMRARQQKAAQPKRTIKRVNQDLGTLNRMASG 205
Query: 152 MMIST------GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETD 205
+ FT + +P+G+E K TR R E+ D +F F R W + L +T
Sbjct: 206 VTTHAQASKFAAFT-RSVTKPQGTE-KFTRMPRTELMDTLFANFLRYDYWATKSLRAQTK 263
Query: 206 QPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
QPE +LK++L ++ G G + LKP+Y +
Sbjct: 264 QPEAYLKEVLTEIATLLKAGPYVGHWVLKPQYAQ 297
>gi|291001011|ref|XP_002683072.1| transcription initiation factor IIF, beta subunit [Naegleria
gruberi]
gi|284096701|gb|EFC50328.1| transcription initiation factor IIF, beta subunit [Naegleria
gruberi]
Length = 300
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R R D +++ +F L++ + W + +L TDQP Q +K +L +CVYN G +G Y+
Sbjct: 216 RVREDGEKIKAKIFSLYKERQYWKMEELANITDQPTQHVKTILSSICVYNKSGEYKGYYQ 275
Query: 233 LKPEY 237
LKPEY
Sbjct: 276 LKPEY 280
>gi|149049980|gb|EDM02304.1| general transcription factor IIF, polypeptide 2, isoform CRA_a
[Rattus norvegicus]
Length = 125
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 136 QVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNW 195
Q +D ++ +P+ + + KKK + KR R D+ + D++F FE+ +
Sbjct: 19 QQLDKVVTTNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYY 73
Query: 196 TLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L+ L+ T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 74 NLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWELKPEYR 116
>gi|409049093|gb|EKM58571.1| hypothetical protein PHACADRAFT_253017 [Phanerochaete carnosa
HHB-10118-sp]
Length = 320
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
Query: 99 GKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDN----DNGSHMRPMPGMMI 154
G++K++ +++P + Y + + R K +R I+ I++ D GS R G+
Sbjct: 136 GRVKHECNLKPML--TDKYRQRLKMRNLKANMPARTIKRIEDEHPGDRGSINRLTSGVTN 193
Query: 155 STGFTE---KKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+TGFT+ K PKG + R R ++ D +F F + +W+++QL + T QPE +L
Sbjct: 194 TTGFTDLVKPKPKPPKGQFERMARMPRNQLLDALFIAFREREHWSVKQLRERTQQPEAYL 253
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYK 238
K++L ++ + G + G++EL +K
Sbjct: 254 KEVLSEIAFMHRSGEHNGTWELMANFK 280
>gi|395326223|gb|EJF58635.1| transcription initiation factor IIF beta subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 317
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 54/274 (19%)
Query: 1 MWLMKCP-ALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM 59
+WL+K P L+ R I D+ P+A + + ++ +++ R +
Sbjct: 37 VWLVKIPRHLMERWSAI-------DEEGVPLATIRVY--------HNAETATGKKPRIML 81
Query: 60 ELI-STESGNAPKRYSMDMSKDLIP-MSVFAE-------SSNGKISV-EGKIKNKFDMRP 109
L + E+G + Y MDM D + V AE S + ++ G++K++ ++RP
Sbjct: 82 LLPPNPETGAEAEEYEMDMVNDDVENQIVVAEREKEPGTQSRARTTILTGRVKHECNLRP 141
Query: 110 HHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM-----MISTGFTE---- 160
+ Y + + R +R+I++I++ +PG M+++G +
Sbjct: 142 IL--TDRYRQRLKMRNLSANQPTRRIRMIED-------AVPGGRGNINMLTSGAAQHSPF 192
Query: 161 -----KKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDML 215
K KP KG + R R ++ D +FK F+ + W+++ L + T QPE +LK++L
Sbjct: 193 SLVRPKAKPA-KGQFERMARMPRDQLLDELFKAFQERERWSIKALRERTQQPEAYLKEVL 251
Query: 216 KDLCVYNNKGSNQGSYELKPEYK----KAADGPA 245
++ + G GS+EL YK KA D P
Sbjct: 252 SEIAFLHRSGEFNGSWELMANYKGEGMKAEDVPG 285
>gi|90086425|dbj|BAE91765.1| unnamed protein product [Macaca fascicularis]
Length = 125
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P+ + + KKK + KR R D+ + D++F FE+ + L+ L+
Sbjct: 27 TNYKPVANHQYNIEYERKKK-----EDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDI 81
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK++LK++ V N KG ++ ++ELKPEY+
Sbjct: 82 TKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYR 116
>gi|1362632|pir||S55766 transcription initiation factor TFIIF small chain - fruit fly
(Drosophila melanogaster) (fragments)
Length = 165
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+EG+I K + RP +N Y KL E K R++Q ID I
Sbjct: 53 MEGRIVQKLECRPIADNC--YMKLKLESIRKASEPQRRVQPIDK-------------IVQ 97
Query: 157 GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLK 216
F + + K +E K+ R D+ + D++F FE+ + ++ L++ T+QP +LK++LK
Sbjct: 98 NFKNIEYRERKKAEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILK 157
Query: 217 DLCVYNNK 224
D+C YN K
Sbjct: 158 DVCDYNMK 165
>gi|345315416|ref|XP_001520962.2| PREDICTED: general transcription factor IIF subunit 2-like, partial
[Ornithorhynchus anatinus]
Length = 85
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 48/67 (71%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
KR R D+ ++ D++F FE+ + ++ L+ T QP +LK++L+++ ++N KG+++ ++
Sbjct: 12 KRARADKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVVYLKEILREIGIHNVKGTHKNTW 71
Query: 232 ELKPEYK 238
ELKPEY+
Sbjct: 72 ELKPEYR 78
>gi|50556122|ref|XP_505469.1| YALI0F15785p [Yarrowia lipolytica]
gi|49651339|emb|CAG78278.1| YALI0F15785p [Yarrowia lipolytica CLIB122]
Length = 366
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 87 FAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHM 146
FA + K ++ G++ ++ + P ++ NY K+ ++R + + ND
Sbjct: 184 FARTIPKKTALAGRVIHECTVVPSLKDA-NYKKVIQKRKERLQQPPAARVTLLND----- 237
Query: 147 RPMPGMMISTGFTEKK---------KPQPKGSEV--KRTRRDRGEMEDIMFKLFERQSNW 195
+PG++ S+ + K Q K ++ K R +R + DI+FKLFE W
Sbjct: 238 --LPGVVASSNAPNLRGTGSQSHFMKAQKKDIKLDGKAVRIERSALLDILFKLFEEYPYW 295
Query: 196 TLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADGPAS 246
+L+ L + T QPE +L+++L + V N G Y L+ EYK+ ++ +
Sbjct: 296 SLKGLKERTKQPEVYLREVLDSMAVLNKSGPYAMKYSLQQEYKQLSNSAGA 346
>gi|432112403|gb|ELK35198.1| General transcription factor IIF subunit 2 [Myotis davidii]
Length = 187
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 136 QVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNW 195
Q +D ++ +P+ + + KKK + KR R D+ + D++F FE+ +
Sbjct: 81 QQLDKVVTTNYKPVANHQYNIEYERKKK-----EDGKRARADKQYVLDMLFSAFEKHQYY 135
Query: 196 TLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L+ L+ T QP +LK++LK++ + N KG ++ ++ELKPEY+
Sbjct: 136 NLKDLVDITKQPVVYLKEILKEIGIQNVKGIHKNTWELKPEYR 178
>gi|403416077|emb|CCM02777.1| predicted protein [Fibroporia radiculosa]
Length = 329
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 99 GKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGF 158
G++K++ ++RP + Y + ++R T +QI I+ + G R M+ S G
Sbjct: 134 GRVKHECNLRPVF--TDRYRQRLKQRAVAANTPKKQIMWIE-EAGVGGRGNINMLTS-GV 189
Query: 159 TE-------KKKPQPKGSEVKR-TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQF 210
T K KP+P + +R R R ++ D +F+ F+ + +W+++ L + T QPE +
Sbjct: 190 TNAVPFSFGKPKPKPAKGQFERMARMPRDQLLDGLFRAFQEREHWSIKVLRERTQQPEAY 249
Query: 211 LKDMLKDLCVYNNKGSNQGSYELKPEYK 238
LK++L ++ + G + G++EL +K
Sbjct: 250 LKEVLSEIAFLHRSGEHNGTWELLQNFK 277
>gi|389612050|dbj|BAM19555.1| transcription factor TFIIFbeta [Papilio xuthus]
Length = 154
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
+EG+I K + RP+ +N KL E K RQ+Q +D + +P+ +
Sbjct: 1 MEGRIVQKLECRPYADNTX--YKLKSESIRKASMPQRQVQQLDRI-VQNFKPVSDHKHNI 57
Query: 157 GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLK 216
F EKK +E K+ R D+ + +++F FE+ + ++ L + T QP +LKD+LK
Sbjct: 58 DFLEKK-----KAEGKKARDDKDVVLNMLFAAFEKHQYYNIKDLQKITKQPIVYLKDILK 112
Query: 217 DLCVYNNKGSNQGSYELKPEYK 238
++C YN K ++ +ELKPEY+
Sbjct: 113 EVCNYNLKNPHKNMWELKPEYR 134
>gi|410080956|ref|XP_003958058.1| hypothetical protein KAFR_0F03270 [Kazachstania africana CBS 2517]
gi|372464645|emb|CCF58923.1| hypothetical protein KAFR_0F03270 [Kazachstania africana CBS 2517]
Length = 389
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 116 NYGKLCRERTN--KYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKG-SEVK 172
NY K+ +R N KY K R I +D G M M S T K + K S +K
Sbjct: 212 NYHKIVEQRRNLVKYNNKER-ITTLDQTVGVTMSHTGMSMKSDTSTFLKVGREKAKSNIK 270
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 271 SIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKYT 330
Query: 233 LKPEYKK 239
LKPEYKK
Sbjct: 331 LKPEYKK 337
>gi|366987389|ref|XP_003673461.1| hypothetical protein NCAS_0A05170 [Naumovozyma castellii CBS 4309]
gi|342299324|emb|CCC67075.1| hypothetical protein NCAS_0A05170 [Naumovozyma castellii CBS 4309]
Length = 412
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKYMTKSRQ-IQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
NY K+ +R N + +++ I ++ G MR GM + ++ F + + + K S +
Sbjct: 236 NYNKIVEQRRNIVKSNNKERITTLEETVGVTMR-HAGMSMKSDTSNFLKVGREKTK-SNI 293
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + + KG Y
Sbjct: 294 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVAILVKKGPYAFKY 353
Query: 232 ELKPEYKK 239
LKPEYKK
Sbjct: 354 TLKPEYKK 361
>gi|388580343|gb|EIM20658.1| transcription initiation factor IIF, beta subunit [Wallemia sebi
CBS 633.66]
Length = 313
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 70 PKRYSMDMSKDLIPMS-VFAE-------------SSNGKISVEGKIKNKFDMRPHHENM- 114
P+ Y++++ K S VFAE +S + I K + HHE
Sbjct: 89 PREYTLNVHKHTSDNSYVFAEKESEITQEQQNVANSGAFTKINPPINTKLSGKIHHEGSL 148
Query: 115 -----ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGS 169
++Y + ++R R ++++ ++ + F + K + KG+
Sbjct: 149 IPDLNDSYKHIMKQRQQSASQPKRTAKILEPEDTKLASGFNTASRFSSFIKTDKSKQKGA 208
Query: 170 EVKRTRR-DRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+ +R R R E+ D++F LFERQ W +R L T QP +LK+ L + NKG
Sbjct: 209 QFERAARMPRNELLDLLFSLFERQKYWNMRDLRSRTQQPLTYLKETLMTIAHLANKGPYH 268
Query: 229 GSYELKPEYKK 239
G + L+ Y++
Sbjct: 269 GHWYLQDVYQR 279
>gi|71017955|ref|XP_759208.1| hypothetical protein UM03061.1 [Ustilago maydis 521]
gi|46098829|gb|EAK84062.1| hypothetical protein UM03061.1 [Ustilago maydis 521]
Length = 432
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D++F LFER W+L++L ET QPE +LK+ L + + +G G++
Sbjct: 311 KFARMPKNELLDMLFGLFERWQYWSLKKLRTETQQPESYLKETLLGIADLHKRGPYVGNW 370
Query: 232 ELKPEY 237
LKPEY
Sbjct: 371 SLKPEY 376
>gi|324518109|gb|ADY47006.1| General transcription factor IIF subunit 2 [Ascaris suum]
Length = 297
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 77 MSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQ 136
+S+D ++ AE +G+++ EG++ + D RP +Y + + K RQ++
Sbjct: 133 LSEDKTGLNEDAEICSGRLAFEGRVIKRADCRP--PQTVDYLHMKINQIEKSSIPKRQLK 190
Query: 137 VIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWT 196
ID + ++ P + I T +++ + +G+ K R D+ + +F FE+ +
Sbjct: 191 QIDK---AEVKFKP-VAIHTETLARERQKKEGA--KTVRGDKDVVRQAIFHAFEKHQYYR 244
Query: 197 LRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
L L + T+QP F+K++L ++ +YN ++ +ELKPEY+
Sbjct: 245 LIDLQKLTNQPPGFVKEILTEIAMYNTTPPHKSMWELKPEYR 286
>gi|303388395|ref|XP_003072432.1| transcription initiation factor TFIIF subunit beta [Encephalitozoon
intestinalis ATCC 50506]
gi|303301572|gb|ADM11072.1| transcription initiation factor TFIIF subunit beta [Encephalitozoon
intestinalis ATCC 50506]
Length = 227
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 97 VEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIST 156
VEG I N+ + P Y + +E K K +QVID G +
Sbjct: 90 VEGVINNECYITPEING--EYLRYKKEAGFKSDAKKSDVQVIDYLKEGKRGEKFGSLREL 147
Query: 157 GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLK 216
+ +K+ + + KR R + E+ D++FK FE+ +WT++ L QP F+++++
Sbjct: 148 EYLARKRKKMLMDK-KRERLGKNEVIDMVFKAFEKYPSWTVKDLADFCGQPVAFIQEIVS 206
Query: 217 DLCVYNNKGSNQGSYELKPEYK 238
D+CV N K + +YEL+PEY+
Sbjct: 207 DICVLNKKDL-KNAYELRPEYR 227
>gi|156370365|ref|XP_001628441.1| predicted protein [Nematostella vectensis]
gi|156215417|gb|EDO36378.1| predicted protein [Nematostella vectensis]
Length = 249
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTK-SRQIQVIDNDNGSHMRPMPGM 152
K++VEG++ + D RP + + + + L + ++ + +K +RQ Q + + +P+
Sbjct: 99 KLAVEGRVVQRADCRPLNPSNDYF--LHKRKSIQVASKPARQAQQLKKIVTNAYKPVSDH 156
Query: 153 MISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLK 212
++ + +KKK E KR R +++ +F FE+ + L+ L+ +T QP +LK
Sbjct: 157 KMNIEYKKKKK-----DEGKRARATEEDVKASLFSAFEQHQYYNLKDLVHKTQQPIVYLK 211
Query: 213 DMLKDLCVYNNKGSNQGSYELKPEYK 238
+LK++ YN K ++ +ELKPEY+
Sbjct: 212 SILKEIAQYNTKNPHKNMWELKPEYR 237
>gi|429961404|gb|ELA40949.1| hypothetical protein VICG_02038 [Vittaforma corneae ATCC 50505]
Length = 236
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
KR R ++ ++ +I+F FE+ WT+R L + QP ++++++ ++CV N K ++ +Y
Sbjct: 169 KRERLEKTDVMEIVFNAFEKHKRWTVRDLADFSGQPVAYIQEIVNEICVLNKK-DHKNTY 227
Query: 232 ELKPEYK 238
ELKPEYK
Sbjct: 228 ELKPEYK 234
>gi|295665530|ref|XP_002793316.1| transcription initiation factor iif [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278230|gb|EEH33796.1| transcription initiation factor iif [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 387
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP--MPG 151
+ ++ G ++++F+ P EN E Y ++ R ++ R+ I +G ++P +
Sbjct: 190 QTAIVGVVRDEFNCLPV-EN-EQYQRMAEARALDFLKPKRETLYIGKVSGEMLKPKTVAA 247
Query: 152 MMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
ST K P+ + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 248 ADKSTFIQVAKPPKARAQENKTARMPQNELLDLIYGCFRRHKYWPFKSLKAELKQPESYL 307
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 308 KQTLEMVAHLVKSGDFAMTWELKPEARES 336
>gi|385304830|gb|EIF48833.1| transcription initiation factor tfiif middle subunit [Dekkera
bruxellensis AWRI1499]
Length = 375
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 129 MTKSRQIQVIDNDNGSHMRPMPGMMISTGFT------EKKKPQPKGSEVKRTRRDRGEME 182
M K + I + N + ++ G I TG T K + +E + +R D+ +
Sbjct: 231 MVKRKHINYLKNVDTGILQGKAGPNIHTGSTITLSRELAAKREAAKTEGRASRMDKKALM 290
Query: 183 DIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAAD 242
++F+LF++ WT++ L ++T+QPE +LK+ L+++ V +G Y L+ EYKK+ +
Sbjct: 291 KVLFELFDKYDYWTMKGLKEKTNQPEVYLKECLENIAVMERRGPYALKYRLRDEYKKSRE 350
>gi|410927374|ref|XP_003977124.1| PREDICTED: general transcription factor IIF subunit 2-like
[Takifugu rubripes]
Length = 206
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 83/155 (53%), Gaps = 12/155 (7%)
Query: 84 MSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNG 143
+ VF+E+S+ I GK+ + D P + + Y +L R K K++ +Q+
Sbjct: 59 LGVFSENSDD-IDYLGKVLVRADCTPAY--FDEYLRLKRLEKKKSPQKAKMLQI--QSPI 113
Query: 144 SHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQE 203
++ +P +S ++ + G++ T D+ + D++F FE+ ++QL+
Sbjct: 114 ANYKP-----VSKHPYHREDKRKVGAQY--TSMDKKLVMDLLFSAFEKHQYCNIKQLVDM 166
Query: 204 TDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
T QP +LK +L+++ VYN G+++ ++EL+PEY+
Sbjct: 167 TKQPVVYLKSILREIGVYNVTGTHKYTWELRPEYR 201
>gi|403215585|emb|CCK70084.1| hypothetical protein KNAG_0D03370 [Kazachstania naganishii CBS
8797]
Length = 382
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTN--KYMTKSRQIQVIDNDNGSHMRPMPG 151
K S+ G + ++ + P N NY K+ R N K+ K R I +D G M G
Sbjct: 188 KTSISGTVCHECQVMPSM-NDPNYHKIVEARRNIVKHNNKER-ITTLDGTVGVTM-SHTG 244
Query: 152 MMI---STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPE 208
M + S+ F + + + K + K R + E+ D +FKLF+ W+L+ L + T QPE
Sbjct: 245 MSMKSDSSKFLKVGREKTKNN-TKSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTKQPE 303
Query: 209 QFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
LK+ L + + KG Y LKPEYKK
Sbjct: 304 AHLKECLDKVAILVKKGPYAFKYTLKPEYKK 334
>gi|444321913|ref|XP_004181612.1| hypothetical protein TBLA_0G01470 [Tetrapisispora blattae CBS 6284]
gi|387514657|emb|CCH62093.1| hypothetical protein TBLA_0G01470 [Tetrapisispora blattae CBS 6284]
Length = 399
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 116 NYGKLCRERTN--KYMTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSE 170
NY K+ +R N KY K R I +D G M GM + ++ F + + + K +
Sbjct: 226 NYNKIVEQRRNIVKYNNKER-ITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKTKNN- 282
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
+K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG
Sbjct: 283 IKSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFK 342
Query: 231 YELKPEYKK 239
Y L+PEYKK
Sbjct: 343 YTLRPEYKK 351
>gi|365991739|ref|XP_003672698.1| hypothetical protein NDAI_0K02640 [Naumovozyma dairenensis CBS 421]
gi|343771474|emb|CCD27455.1| hypothetical protein NDAI_0K02640 [Naumovozyma dairenensis CBS 421]
Length = 418
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 116 NYGKLCRERTNKYMTKSRQ--------IQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPK 167
NY K+ +R N T +++ + V + G MR + G EK K
Sbjct: 237 NYHKIVEQRRNIVKTNNKERITTLAETVGVTMSHTGMSMRSDTSNFLKVG-REKAK---- 291
Query: 168 GSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSN 227
S +K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + + KG
Sbjct: 292 -SNIKSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVAILVKKGPY 350
Query: 228 QGSYELKPEYKK 239
Y L+PEYKK
Sbjct: 351 AFKYTLRPEYKK 362
>gi|149248558|ref|XP_001528666.1| hypothetical protein LELG_01186 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448620|gb|EDK43008.1| hypothetical protein LELG_01186 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 403
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 87 FAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHM 146
F ++ K S+ GK+ + + P N +Y +L ++R + R + N+ +
Sbjct: 214 FVKTIPKKTSLLGKVCHDCTVVPLR-NDSSYAELLKKRESLVKAPERPKVTLLNEIPGVI 272
Query: 147 RPMPGMMI----STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQ 202
+ G I ++ F + +P+ K SE + R R ++ D++F+ FE W+++ L +
Sbjct: 273 QSNAGPSIKGNNTSVFLKSTQPKSK-SEGRAIRMPRKDLLDLLFRCFEEYEYWSIKGLKE 331
Query: 203 ETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
T QPE +LK+ L+ + KG + LK EYKK D
Sbjct: 332 RTKQPESYLKESLESIATLIKKGPYTSKWALKAEYKKLRDA 372
>gi|358394163|gb|EHK43564.1| hypothetical protein TRIATDRAFT_167360, partial [Trichoderma
atroviride IMI 206040]
Length = 373
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID-NDNGSHMRPMPGM 152
K + GKI+ +D+R N+ +L +R ++Q+I N S + P
Sbjct: 194 KTKIFGKIR--YDLRVEPRNLREEEELLAKRIFDAENSKTKLQIISRNKASSIINPGATG 251
Query: 153 MISTGFTEKKKPQP-----KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
+S G K P KG +K TR + ++ D++F F + W+++ L Q T QP
Sbjct: 252 SVSWGGNFIKNAAPTTKPKKGEILKATRIPKNQLLDLIFDCFRQYQYWSMKALRQRTQQP 311
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ +L+ +L+++ V N G Y L Y+
Sbjct: 312 DSYLRQVLEEVAVLNKSGPFANHYCLSEAYR 342
>gi|387594063|gb|EIJ89087.1| hypothetical protein NEQG_00906 [Nematocida parisii ERTm3]
gi|387595736|gb|EIJ93359.1| hypothetical protein NEPG_01701 [Nematocida parisii ERTm1]
Length = 219
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 170 EVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQG 229
E KR R + E+ DI+F+ FE W+++ L + QP +++++L D+ V N K +++
Sbjct: 149 EKKRERLSKTEVMDIIFRAFEEYPYWSVKDLADRSGQPLAYIQELLPDIAVLNKK-THRN 207
Query: 230 SYELKPEYK 238
YELKPEYK
Sbjct: 208 MYELKPEYK 216
>gi|393912406|gb|EFO26064.2| hypothetical protein LOAG_02427 [Loa loa]
Length = 294
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 88 AESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR 147
A+ +G++S+EG++ + D RP +Y ++ ++ K R ++ ++ + ++
Sbjct: 142 ADICSGRLSIEGRVVKRADCRP--PQTADYMRMKIKQIEKSSQPKRHVKQMEK---AEVK 196
Query: 148 PMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
P + + ++K + +G+ K R D+ + +F FE+ + L L + T QP
Sbjct: 197 FKP-IAVHAEMQAREKQKKEGA--KTVRADKDVVRQAIFHAFEKHQYYRLVDLQKLTSQP 253
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
F+K++L ++ VYN ++ +ELKPEY+
Sbjct: 254 PGFVKEILTEIAVYNTMPPHKSMWELKPEYR 284
>gi|367013210|ref|XP_003681105.1| hypothetical protein TDEL_0D03100 [Torulaspora delbrueckii]
gi|359748765|emb|CCE91894.1| hypothetical protein TDEL_0D03100 [Torulaspora delbrueckii]
Length = 399
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 116 NYGKLCRERTN--KYMTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSE 170
NY K+ +R N K K R I +D G M GM + ++ F + + + K S
Sbjct: 223 NYHKIVEQRRNIVKNYNKER-ITTLDQTVGVTM-SHTGMSMRSDNSNFLKVAREKSK-SN 279
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
K R + E+ D +FKLF+ W+L+ L + T QPE LKD L + KG
Sbjct: 280 TKYIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKDCLDKVATLVKKGPYAFK 339
Query: 231 YELKPEYKKAAD 242
Y L+PEYK+ D
Sbjct: 340 YTLRPEYKRLKD 351
>gi|157830215|pdb|1BBY|A Chain A, Dna-Binding Domain From Human Rap30, Nmr, Minimized
Average
gi|157834686|pdb|2BBY|A Chain A, Dna-Binding Domain From Human Rap30, Nmr, 30 Structures
Length = 69
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 175 RRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELK 234
R D+ + D++F FE+ + L+ L+ T QP +LK++LK++ V N KG ++ ++ELK
Sbjct: 3 RADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELK 62
Query: 235 PEYK 238
PEY+
Sbjct: 63 PEYR 66
>gi|320592141|gb|EFX04580.1| transcription initiation factor beta subunit [Grosmannia clavigera
kw1407]
Length = 389
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 87 FAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHM 146
F ++ K +V G+I+++ + P Y + ER M Q++ D
Sbjct: 193 FRKAIPKKTTVAGRIRHELNCAPVKNPESEY--ILNERARAAMLPKAQVKFGDASKPEFR 250
Query: 147 RPMPGMMISTGF------TEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQL 200
G + S + T + P+ K +E K R ++ D++F F R W++R L
Sbjct: 251 IIGSGGIASHSYATDFIKTAQTAPKVKKAETKTARMPENDLLDLIFACFARFRFWSMRAL 310
Query: 201 IQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADGPAS 246
E QPE +L+ L+ + + G ++ELKPE +K DG A+
Sbjct: 311 RAEIPQPEIYLRQTLEKVADLHRSGRFANNWELKPENRK--DGSAT 354
>gi|358387418|gb|EHK25013.1| hypothetical protein TRIVIDRAFT_128281, partial [Trichoderma virens
Gv29-8]
Length = 368
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID-NDNGSHMRPMPGM 152
K + GKI+ +D+R N+ +L +R + ++Q+I N S + P
Sbjct: 189 KTKIFGKIR--YDLRVEPRNLREEEELLAKRIFEVENSKSKLQIISRNKASSIINPGSAG 246
Query: 153 MISTGFTEKK------KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQ 206
+S G K KP+ KG +K TR + ++ D++F F + W+++ L Q T Q
Sbjct: 247 SVSWGGNFIKNAPSTVKPK-KGEILKATRIPKNQLLDLIFDCFRQYQYWSMKALRQRTQQ 305
Query: 207 PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
P+ +L+ +L+++ V N G Y L Y+
Sbjct: 306 PDSYLRQVLEEVAVLNKSGPFANHYCLSEAYR 337
>gi|365760663|gb|EHN02368.1| Tfg2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 400
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKY-MTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
NY K+ +R N + +I +D G M GM + ++ F + + + K S +
Sbjct: 232 NYHKIVEQRRNIVKLNNKERITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKAK-SNI 289
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 290 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKY 349
Query: 232 ELKPEYKK 239
L+PEYKK
Sbjct: 350 TLRPEYKK 357
>gi|156844255|ref|XP_001645191.1| hypothetical protein Kpol_1062p42 [Vanderwaltozyma polyspora DSM
70294]
gi|156115849|gb|EDO17333.1| hypothetical protein Kpol_1062p42 [Vanderwaltozyma polyspora DSM
70294]
Length = 408
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQ-IQVIDNDNGSHMRPMPGM 152
K S+ G + ++ + P N NY K+ +R N +++ I +D G M GM
Sbjct: 202 KTSISGTVCHECQVMPSM-NDPNYHKIVEQRRNIVKNSNKERITTLDETVGVTM-SHTGM 259
Query: 153 MI---STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+ ++ F + + + K + +K R + E+ D +FKLF+ W+L+ L + T QPE
Sbjct: 260 SMKSDNSNFLKVGREKAKAN-IKSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEA 318
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
LK+ L + KG Y L+PEYKK
Sbjct: 319 HLKECLDKVATLVKKGPYAFKYTLRPEYKK 348
>gi|402588061|gb|EJW81995.1| hypothetical protein WUBG_07095 [Wuchereria bancrofti]
Length = 271
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 88 AESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR 147
A+ +G++S+EG++ + D RP ++Y ++ ++ K R ++ ++ + ++
Sbjct: 120 ADICSGRLSIEGRVVKRADCRP--PQTDDYMRMKIKQIEKSSQPKRHVKQMEK---AEVK 174
Query: 148 PMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
P + + E+ + + E K R D+ + +F FE+ + L L + T QP
Sbjct: 175 FKP-IAVHAEMLERSR---RKKEQKTVRADKDVVRQAIFHAFEKHQYYRLVDLQKLTSQP 230
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
F+K++L ++ VYN ++ +ELKPEY+
Sbjct: 231 PGFVKEILTEIAVYNTMPPHKSMWELKPEYR 261
>gi|50287833|ref|XP_446346.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525653|emb|CAG59270.1| unnamed protein product [Candida glabrata]
Length = 395
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTN--------KYMTKSRQIQVIDNDNGSH 145
K S+ G + ++ + P N NY K+ +R N K +T + V + G
Sbjct: 205 KTSIVGTVCHECQVMPSM-NDPNYHKIVEQRRNIVKNSNKEKIVTLDETVGVTMSHTGMS 263
Query: 146 MRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETD 205
MR + G EK K + +K R + E+ D +FKLF+ W+L+ L + T
Sbjct: 264 MRSDNSNFLKVG-REKAK-----NNIKSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTR 317
Query: 206 QPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
QPE LK+ L + KG Y L+PEYKK
Sbjct: 318 QPEAHLKECLDKVATLVKKGPYAFKYTLRPEYKK 351
>gi|261197806|ref|XP_002625305.1| transcription initiation factor iif [Ajellomyces dermatitidis
SLH14081]
gi|239595268|gb|EEQ77849.1| transcription initiation factor iif [Ajellomyces dermatitidis
SLH14081]
gi|239607691|gb|EEQ84678.1| transcription initiation factor iif [Ajellomyces dermatitidis ER-3]
gi|327355621|gb|EGE84478.1| transcription initiation factor iif [Ajellomyces dermatitidis ATCC
18188]
Length = 387
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP--MPG 151
+ ++ G ++++F+ P EN E Y ++ R + R+ I +G ++P +
Sbjct: 190 QTAIVGSVRDEFNCLPV-EN-EEYQRMAEARALDVLKPKRETIYIGKVSGEMLKPKTVAA 247
Query: 152 MMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
ST K P+ + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 248 ADKSTFIQVAKPPKARAQENKTARMPQNELLDLIYGCFRRHKYWPFKSLKAELRQPEAYL 307
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 308 KQTLEMVAHLVKSGDFAMTWELKPEARES 336
>gi|401840264|gb|EJT43155.1| TFG2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 400
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKY-MTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
NY K+ +R N + +I +D G M GM + ++ F + + + K S +
Sbjct: 232 NYHKIVEQRRNIVKLNNKERITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKAK-SNI 289
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 290 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKY 349
Query: 232 ELKPEYKK 239
L+PEYKK
Sbjct: 350 TLRPEYKK 357
>gi|392564191|gb|EIW57369.1| hypothetical protein TRAVEDRAFT_72488 [Trametes versicolor
FP-101664 SS1]
Length = 366
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 122 RERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEM 181
R RT RQI++ + G +RP M + K P+ K + +R R D+ E+
Sbjct: 216 RARTVAAAIPQRQIKIYEPKPGE-VRPE--CMPRVRPRDAKAPR-KRTANRRVRADKAEL 271
Query: 182 EDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
D++F+LF + W+ + L ++T QPE +LK +L ++ + G + +EL Y
Sbjct: 272 LDMLFQLFVDRPQWSFKDLQEKTRQPEAYLKKVLPEIAFLHRGGLHYNYWELSANY 327
>gi|240275599|gb|EER39113.1| transcription initiation factor iif [Ajellomyces capsulatus H143]
gi|325091431|gb|EGC44741.1| transcription initiation factor iif [Ajellomyces capsulatus H88]
Length = 387
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP--MPG 151
+ ++ G ++++F+ P EN E Y ++ R + R+ I +G ++P +
Sbjct: 190 QTAIVGSVRDEFNCLPV-EN-EEYQRMAEARALDVLKPKRETLYIGKVSGEMLKPKTVAA 247
Query: 152 MMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
ST K P+ + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 248 ADKSTFIQVAKPPKVRAQENKTARMPQNELLDLIYGCFRRHKYWPFKSLKAELKQPEAYL 307
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 308 KQTLEMVAHLVKSGDFAMTWELKPEARES 336
>gi|225561990|gb|EEH10270.1| transcription initiation factor iif [Ajellomyces capsulatus G186AR]
Length = 387
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP--MPG 151
+ ++ G ++++F+ P EN E Y ++ R + R+ I +G ++P +
Sbjct: 190 QTAIVGSVRDEFNCLPV-EN-EEYQRMAEARALDVLKPKRETLYIGKVSGEMLKPKTVAA 247
Query: 152 MMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
ST K P+ + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 248 ADKSTFIQVAKPPKVRAQENKTARMPQNELLDLIYGCFRRHKYWPFKSLKAELKQPEAYL 307
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 308 KQTLEMVAHLVKSGDFAMTWELKPEARES 336
>gi|398365043|ref|NP_011519.3| Tfg2p [Saccharomyces cerevisiae S288c]
gi|1729818|sp|P41896.2|T2FB_YEAST RecName: Full=Transcription initiation factor IIF subunit beta;
AltName: Full=ATP-dependent helicase TFG2; AltName:
Full=TFIIF medium subunit; AltName: Full=TFIIF-beta;
AltName: Full=Transcription factor G 54 kDa subunit
gi|1322961|emb|CAA96988.1| TFG2 [Saccharomyces cerevisiae]
gi|51013193|gb|AAT92890.1| YGR005C [Saccharomyces cerevisiae]
gi|151943292|gb|EDN61605.1| transcription initiation factor TFIIF middle subunit [Saccharomyces
cerevisiae YJM789]
gi|190406965|gb|EDV10232.1| transcription initiation factor IIF beta subunit [Saccharomyces
cerevisiae RM11-1a]
gi|207345246|gb|EDZ72129.1| YGR005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273879|gb|EEU08800.1| Tfg2p [Saccharomyces cerevisiae JAY291]
gi|285812203|tpg|DAA08103.1| TPA: Tfg2p [Saccharomyces cerevisiae S288c]
gi|323309114|gb|EGA62342.1| Tfg2p [Saccharomyces cerevisiae FostersO]
gi|323333468|gb|EGA74862.1| Tfg2p [Saccharomyces cerevisiae AWRI796]
gi|349578225|dbj|GAA23391.1| K7_Tfg2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765618|gb|EHN07125.1| Tfg2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299264|gb|EIW10358.1| Tfg2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 400
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKY-MTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
NY K+ +R N + +I +D G M GM + ++ F + + + K S +
Sbjct: 232 NYHKIVEQRRNIVKLNNKERITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKAK-SNI 289
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 290 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKY 349
Query: 232 ELKPEYKK 239
L+PEYKK
Sbjct: 350 TLRPEYKK 357
>gi|259146508|emb|CAY79765.1| Tfg2p [Saccharomyces cerevisiae EC1118]
Length = 400
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKY-MTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
NY K+ +R N + +I +D G M GM + ++ F + + + K S +
Sbjct: 232 NYHKIVEQRRNIVKLNNKERITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKAK-SNI 289
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 290 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKY 349
Query: 232 ELKPEYKK 239
L+PEYKK
Sbjct: 350 TLRPEYKK 357
>gi|323337655|gb|EGA78900.1| Tfg2p [Saccharomyces cerevisiae Vin13]
Length = 400
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKY-MTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
NY K+ +R N + +I +D G M GM + ++ F + + + K S +
Sbjct: 232 NYHKIVEQRRNIVKLNNKERITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKAK-SNI 289
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 290 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKY 349
Query: 232 ELKPEYKK 239
L+PEYKK
Sbjct: 350 TLRPEYKK 357
>gi|401625726|gb|EJS43721.1| tfg2p [Saccharomyces arboricola H-6]
Length = 399
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKY-MTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
NY K+ +R N + +I +D G M GM + ++ F + + + K S +
Sbjct: 231 NYHKIVEQRRNIVKLNNKERITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKAK-SNI 288
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 289 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKY 348
Query: 232 ELKPEYKK 239
L+PEYKK
Sbjct: 349 TLRPEYKK 356
>gi|367005961|ref|XP_003687712.1| hypothetical protein TPHA_0K01450 [Tetrapisispora phaffii CBS 4417]
gi|357526017|emb|CCE65278.1| hypothetical protein TPHA_0K01450 [Tetrapisispora phaffii CBS 4417]
Length = 403
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQ-IQVIDNDNGSHMRPMPGM 152
K S+ G + ++ + P N NY K+ +R N +++ I +D G M GM
Sbjct: 209 KTSITGTVCHECQVMPSM-NDPNYHKIVEQRRNIVKRNNKETITTLDETVGVTM-SHTGM 266
Query: 153 MI---STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+ S+ F + + + K + VK R + E+ D +FKLF+ W+L+ L + T QPE
Sbjct: 267 SMKSDSSNFLKVGREKAKQN-VKSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEA 325
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
LK+ L + KG Y L+PEYKK
Sbjct: 326 HLKECLDKVATLVKKGPYAFKYTLRPEYKK 355
>gi|393245345|gb|EJD52856.1| hypothetical protein AURDEDRAFT_111380 [Auricularia delicata
TFB-10046 SS5]
Length = 359
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 83 PMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQI----QVI 138
P A + NGKI E ++ + R Y ++ +ER R I +V+
Sbjct: 162 PSRTKATTRNGKIRHECNLQPIMNAR--------YRRIIKERVRIANMSKRPIMRMEEVL 213
Query: 139 D----NDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKR-TRRDRGEMEDIMFKLFERQS 193
+ N S + P + + + +KPQ + E +R R R E+ D +F+ F+ +
Sbjct: 214 ETQAINRLASGVPSGPPVSSTWQPSRSQKPQARKGEFERFARMPRNELYDALFERFKEKP 273
Query: 194 NWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
+W+L++L T QPE +LK++L ++ + G G + LK Y
Sbjct: 274 DWSLKELRARTQQPEAYLKEVLAEVATLHRSGEKVGLWTLKTNY 317
>gi|350645052|emb|CCD60234.1| transcription initiation factor iif (tfiif),beta subunit-related
[Schistosoma mansoni]
Length = 335
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K E K RR++ ++ +FK FER ++++ L+ T QP +L ++LK++ ++N
Sbjct: 250 KKVEGKNLRREKEDVLQDLFKAFERHQYYSIKDLVVLTKQPLAYLTEILKEIAIFNTHIP 309
Query: 227 NQGSYELKPEYK 238
++ +ELKPEY+
Sbjct: 310 HKNMWELKPEYR 321
>gi|256070160|ref|XP_002571412.1| transcription initiation factor iif (tfiif) beta subunit-related
[Schistosoma mansoni]
Length = 335
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K E K RR++ ++ +FK FER ++++ L+ T QP +L ++LK++ ++N
Sbjct: 250 KKVEGKNLRREKEDVLQDLFKAFERHQYYSIKDLVVLTKQPLAYLTEILKEIAIFNTHIP 309
Query: 227 NQGSYELKPEYK 238
++ +ELKPEY+
Sbjct: 310 HKNMWELKPEYR 321
>gi|302666417|ref|XP_003024808.1| hypothetical protein TRV_01024 [Trichophyton verrucosum HKI 0517]
gi|291188880|gb|EFE44197.1| hypothetical protein TRV_01024 [Trichophyton verrucosum HKI 0517]
Length = 402
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP-MPGM 152
+ ++ ++ ++F+ P EN E Y +L ER + + R+ + I+ G ++P
Sbjct: 205 QTAITARVHDEFNCLPV-EN-EEYQRLAEERALESLKPKRETKFIEKVPGKMLQPKTVAA 262
Query: 153 MISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + KP + + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 263 ADKSNFIQIAKPAKVRAQENKTARMPQNELLDLIYACFRRHKYWPFKALKAELQQPEVYL 322
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA--ADGPA 245
K L+ + G ++ELKPE +++ AD A
Sbjct: 323 KQTLEIVAHLVKSGDFAMTWELKPEARESNYADAIA 358
>gi|345566346|gb|EGX49289.1| hypothetical protein AOL_s00078g322 [Arthrobotrys oligospora ATCC
24927]
Length = 383
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 159 TEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDL 218
TEKKK Q E K TR R E+ D +F F WTL+ L + +QPE +LK+ L+ +
Sbjct: 272 TEKKKTQ----ENKATRMPRNELLDALFTCFSEYEFWTLKGLRERLNQPEAYLKETLESI 327
Query: 219 CVYNNKGSNQGSYELKPEYK 238
G ++LKPEYK
Sbjct: 328 ATLLKTGPFALKWQLKPEYK 347
>gi|326482640|gb|EGE06650.1| transcription initiation factor IIF subunit beta [Trichophyton
equinum CBS 127.97]
Length = 383
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP-MPGM 152
+ ++ ++ ++F+ P EN E Y +L ER + + R+ + I+ G ++P
Sbjct: 186 QTAITARVHDEFNCLPV-EN-EEYQRLAEERALESLKPKRETKFIEKVPGKMLQPKTVAA 243
Query: 153 MISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + KP + + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 244 ADKSNFIQIAKPAKVRAQENKTARMPQNELLDLIYACFRRHKYWPFKALKAELQQPEVYL 303
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 304 KQTLEIVAHLVKSGDFAMTWELKPEARES 332
>gi|327298045|ref|XP_003233716.1| transcription initiation factor iif [Trichophyton rubrum CBS
118892]
gi|326463894|gb|EGD89347.1| transcription initiation factor iif [Trichophyton rubrum CBS
118892]
Length = 381
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP-MPGM 152
+ ++ ++ ++F+ P EN E Y +L ER + + R+ + I+ G ++P
Sbjct: 184 QTAITARVHDEFNCLPV-EN-EEYQRLAEERALESLKPKRETKFIEKVPGKMLQPKTVAA 241
Query: 153 MISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + KP + + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 242 ADKSNFIQIAKPAKVRAQENKTARMPQNELLDLIYACFRRHKYWPFKALKAELQQPEVYL 301
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 302 KQTLEIVAHLVKSGDFAMTWELKPEARES 330
>gi|326470092|gb|EGD94101.1| transcription initiation factor iif [Trichophyton tonsurans CBS
112818]
Length = 381
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP-MPGM 152
+ ++ ++ ++F+ P EN E Y +L ER + + R+ + I+ G ++P
Sbjct: 184 QTAITARVHDEFNCLPV-EN-EEYQRLAEERALESLKPKRETKFIEKVPGKMLQPKTVAA 241
Query: 153 MISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + KP + + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 242 ADKSNFIQIAKPAKVRAQENKTARMPQNELLDLIYACFRRHKYWPFKALKAELQQPEVYL 301
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 302 KQTLEIVAHLVKSGDFAMTWELKPEARES 330
>gi|226487338|emb|CAX75534.1| general transcription factor IIF, polypeptide 2 [Schistosoma
japonicum]
Length = 335
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K RR++ ++ +FK FER ++++ L+ T QP +L ++LK++ ++N ++
Sbjct: 252 AEGKNLRREKEDVLQDLFKAFERHQYYSIKDLVVLTKQPLAYLTEILKEIAIFNTHIPHK 311
Query: 229 GSYELKPEYK 238
+ELKPEY+
Sbjct: 312 NMWELKPEYR 321
>gi|226471062|emb|CAX70612.1| general transcription factor IIF, polypeptide 2 [Schistosoma
japonicum]
gi|226487346|emb|CAX75536.1| general transcription factor IIF, polypeptide 2 [Schistosoma
japonicum]
Length = 335
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K RR++ ++ +FK FER ++++ L+ T QP +L ++LK++ ++N ++
Sbjct: 252 AEGKNLRREKEDVLQDLFKAFERHQYYSIKDLVVLTKQPLAYLTEILKEIAIFNTHIPHK 311
Query: 229 GSYELKPEYK 238
+ELKPEY+
Sbjct: 312 NMWELKPEYR 321
>gi|226487340|emb|CAX75535.1| general transcription factor IIF, polypeptide 2 [Schistosoma
japonicum]
Length = 335
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K RR++ ++ +FK FER ++++ L+ T QP +L ++LK++ ++N ++
Sbjct: 252 AEGKNLRREKEDVLQDLFKAFERHQYYSIKDLVVLTKQPLAYLTEILKEIAIFNTHIPHK 311
Query: 229 GSYELKPEYK 238
+ELKPEY+
Sbjct: 312 NMWELKPEYR 321
>gi|76154945|gb|AAX26335.2| SJCHGC05520 protein [Schistosoma japonicum]
Length = 322
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K RR++ ++ +FK FER ++++ L+ T QP +L ++LK++ ++N ++
Sbjct: 245 AEGKNLRREKEDVLQDLFKAFERHQYYSIKDLVVLTKQPLAYLTEILKEIAIFNTHIPHK 304
Query: 229 GSYELKPEYK 238
+ELKPEY+
Sbjct: 305 NMWELKPEYR 314
>gi|378755987|gb|EHY66012.1| hypothetical protein NERG_00708 [Nematocida sp. 1 ERTm2]
Length = 220
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 170 EVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQG 229
E KR R + E+ DI+F+ FE W+++ L + QP +++++L + V N K +++
Sbjct: 149 EKKRERLSKTEVMDILFRAFEEYPYWSVKDLADRSGQPLAYIQELLPGIAVLNKK-AHRN 207
Query: 230 SYELKPEYKKAAD 242
YELKPEYK +
Sbjct: 208 MYELKPEYKSGTN 220
>gi|296818645|ref|XP_002849659.1| transcription initiation factor IIF subunit beta [Arthroderma otae
CBS 113480]
gi|238840112|gb|EEQ29774.1| transcription initiation factor IIF subunit beta [Arthroderma otae
CBS 113480]
Length = 381
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP-MPGM 152
+ ++ ++ ++F+ P EN E Y ++ ER + + R+ + I+ G +RP
Sbjct: 184 QTAITARVHDEFNCLPV-EN-EEYQRIAEERALESLKPKRETKFIEKVPGKMLRPKTVAA 241
Query: 153 MISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + KP + + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 242 ADKSNFIQVTKPAKVRAQENKTARMPQNELLDLIYACFRRYKYWPFKSLKAELRQPEVYL 301
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 302 KQTLEIVAHLVKSGDFALTWELKPEARES 330
>gi|226471060|emb|CAX70611.1| general transcription factor IIF, polypeptide 2 [Schistosoma
japonicum]
Length = 304
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 169 SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQ 228
+E K RR++ ++ +FK FER ++++ L+ T QP +L ++LK++ ++N ++
Sbjct: 221 AEGKNLRREKEDVLQDLFKAFERHQYYSIKDLVVLTKQPLAYLTEILKEIAIFNTHIPHK 280
Query: 229 GSYELKPEYK 238
+ELKPEY+
Sbjct: 281 NMWELKPEYR 290
>gi|302507152|ref|XP_003015537.1| hypothetical protein ARB_05848 [Arthroderma benhamiae CBS 112371]
gi|291179105|gb|EFE34892.1| hypothetical protein ARB_05848 [Arthroderma benhamiae CBS 112371]
Length = 381
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP-MPGM 152
+ ++ ++ ++F+ P EN E Y +L ER + + R+ + I+ G ++P
Sbjct: 184 QTAITARVHDEFNCLPV-EN-EEYQRLAEERALESLKPKRETKFIEKVPGKMLQPKTVAA 241
Query: 153 MISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + KP + + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 242 ADKSNFIQIAKPAKVRAQENKTARMPQNELLDLIYACFRRHKYWPFKALKAELQQPEVYL 301
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 302 KQTLEIVAHLVKSGDFAMTWELKPEARES 330
>gi|315040055|ref|XP_003169405.1| hypothetical protein MGYG_08309 [Arthroderma gypseum CBS 118893]
gi|311346095|gb|EFR05298.1| hypothetical protein MGYG_08309 [Arthroderma gypseum CBS 118893]
Length = 381
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP-MPGM 152
+ ++ ++ ++F+ P EN E Y +L ER + + R+ + I+ G ++P
Sbjct: 184 QTAITARVHDEFNCLPV-EN-EEYQRLAEERALESLKPKRETKFIEKVPGKMLQPKTVAA 241
Query: 153 MISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + KP + + E K R + E+ D+++ F R W + L E QPE +L
Sbjct: 242 ADKSNFIQVAKPAKVRAQENKTARMPQNELLDLIYACFRRHKYWPFKSLKAELRQPEVYL 301
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE +++
Sbjct: 302 KQTLEIVAHLVKSGDFAMTWELKPEARES 330
>gi|341895421|gb|EGT51356.1| hypothetical protein CAEBREN_08139 [Caenorhabditis brenneri]
Length = 266
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 37 IDPLQSNEDSSSSSSSSSTRFTMELISTESGNAPKRYSMDM-----------SKDLIPMS 85
++P + +D +SS+++ + +E+ P +YS + S+D +
Sbjct: 58 LNPPKPKDDGEGTSSTTAP------MPSEASEIPTQYSFILNDVRGQTMSLLSEDKTGLG 111
Query: 86 VFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSH 145
A GK+++EG+I K + RP Y K+ K + +++ID
Sbjct: 112 SEAAVKTGKLAIEGRIIKKAECRP--PATSKYMKMKLAHIVKNTQPKKTVKMIDK-AAVK 168
Query: 146 MRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETD 205
+P +S + + + K K R DR + +FK FE+ S + L+ L Q
Sbjct: 169 FKP-----VSVHAEDMIRSKAKKDGAKTYRADRDVLRQSLFKAFEKHSYYRLQDLQQLLQ 223
Query: 206 QPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
QP ++K++L+++ VYN ++ + LKPEY
Sbjct: 224 QPVSYVKEVLQEIAVYNTAPPHKSLWCLKPEY 255
>gi|225679339|gb|EEH17623.1| transcription initiation factor iif [Paracoccidioides brasiliensis
Pb03]
Length = 369
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 115 ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP--MPGMMISTGFTEKKKPQPKGSEVK 172
E Y ++ R ++ R+ I +G ++P + ST K P+ + E K
Sbjct: 191 EQYQRMAEARALDFLKPKRETLYIGKVSGEMLKPKTVAAADKSTFIQVAKPPKARAQENK 250
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R + E+ D+++ F R W + L E QPE +LK L+ + G ++E
Sbjct: 251 TARMPQNELLDLIYGCFRRHKYWPFKSLKAELKQPESYLKQTLEMVAHLVKSGDFAMTWE 310
Query: 233 LKPEYKKA 240
LKPE +++
Sbjct: 311 LKPEARES 318
>gi|226291060|gb|EEH46488.1| transcription initiation factor iif [Paracoccidioides brasiliensis
Pb18]
Length = 369
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 115 ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP--MPGMMISTGFTEKKKPQPKGSEVK 172
E Y ++ R ++ R+ I +G ++P + ST K P+ + E K
Sbjct: 191 EQYQRMAEARALDFLKPKRETLYIGKVSGEMLKPKTVAAADKSTFIQVAKPPKARAQENK 250
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R + E+ D+++ F R W + L E QPE +LK L+ + G ++E
Sbjct: 251 TARMPQNELLDLIYGCFRRHKYWPFKSLKAELKQPESYLKQTLEMVAHLVKSGDFAMTWE 310
Query: 233 LKPEYKKA 240
LKPE +++
Sbjct: 311 LKPEARES 318
>gi|639703|gb|AAA61642.1| transcription initiation factor TFIIF middle subunit [Saccharomyces
cerevisiae]
Length = 400
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 116 NYGKLCRERTNKY-MTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKGSEV 171
+Y K+ +R N + +I +D G M GM + ++ F + + + K S +
Sbjct: 232 HYHKIVEQRRNIVKLNNKERITTLDETVGVTM-SHTGMSMRSDNSNFLKVGREKAK-SNI 289
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R + E+ D +FKLF+ W+L+ L + T QPE LK+ L + KG Y
Sbjct: 290 KSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKY 349
Query: 232 ELKPEYKK 239
L+PEYKK
Sbjct: 350 TLRPEYKK 357
>gi|392866571|gb|EAS27802.2| transcription initiation factor iif [Coccidioides immitis RS]
Length = 382
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
+ ++ ++ ++F+ P EN E Y ++ +R + + R+ + I+ G ++P
Sbjct: 187 QTAIAARVHDEFNCLPV-EN-EEYHRIAEKRALEALKPKRETKFIERVTGKMLQPKTAQA 244
Query: 154 I--STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
S K P+ + + K R + E+ D+++ F R W + L E QPE +L
Sbjct: 245 ADKSNFIQVTKPPKIRTQDNKTARMPQNELLDLIYACFRRYRYWPFKSLKAELKQPEAYL 304
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
K L+ + G ++ELKPE ++A+
Sbjct: 305 KQTLEMVAHLVKSGDFAMTWELKPEAREAS 334
>gi|119180086|ref|XP_001241550.1| hypothetical protein CIMG_08713 [Coccidioides immitis RS]
Length = 370
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
+ ++ ++ ++F+ P EN E Y ++ +R + + R+ + I+ G ++P
Sbjct: 175 QTAIAARVHDEFNCLPV-EN-EEYHRIAEKRALEALKPKRETKFIERVTGKMLQPKTAQA 232
Query: 154 I--STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
S K P+ + + K R + E+ D+++ F R W + L E QPE +L
Sbjct: 233 ADKSNFIQVTKPPKIRTQDNKTARMPQNELLDLIYACFRRYRYWPFKSLKAELKQPEAYL 292
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
K L+ + G ++ELKPE ++A+
Sbjct: 293 KQTLEMVAHLVKSGDFAMTWELKPEAREAS 322
>gi|145253018|ref|XP_001398022.1| transcription initiation factor iif, beta subunit [Aspergillus
niger CBS 513.88]
gi|134083580|emb|CAL00495.1| unnamed protein product [Aspergillus niger]
Length = 383
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP---MP 150
+ ++ G + +F+ P EN E + +L ++ + + R+ ID G ++P +P
Sbjct: 190 QTALVGSVSEEFNCLPV-EN-EEFRRLSEKKALEALKPKRETVFIDKIPGKMLQPRNALP 247
Query: 151 GMMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
G F + +P +PK E K TR + E+ D++++ F W + L QPE
Sbjct: 248 GE--KGAFVQATRPVKPKAQENKTTRMPQNELLDLIYQCFREYKYWPFKNLKARLRQPEA 305
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
+LK L+ + G ++ELKPE +++
Sbjct: 306 YLKQTLEMVAHLVKAGDFAMTWELKPEARES 336
>gi|406601241|emb|CCH47093.1| Transcription initiation factor IIF subunit beta [Wickerhamomyces
ciferrii]
Length = 424
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 76 DMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQI 135
D + +IP F ++ K S+ GKI ++ + P N NY K+ + R N + R
Sbjct: 226 DGTDKVIP---FVKTIPKKTSLIGKIAHECQITPMV-NDPNYSKIIQRRKNLIKEEPRPT 281
Query: 136 QVIDNDNGSHMRPMPGMMISTG----------FTEKKKPQPKGSEVKRTRRDRGEMEDIM 185
+ N+ +PG+ +S F + +E + R + ++ D++
Sbjct: 282 VTLLNE-------IPGVTLSNAGLTLKTDTSKFLKSSASTKNKNEGRAIRMPQKDLFDLL 334
Query: 186 FKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAAD 242
FKLF+ W+L+ L + T QPE +LK+ L+ + KG Y LK E+K+ D
Sbjct: 335 FKLFDEYDYWSLKGLKERTKQPEVYLKETLEQIAQLIKKGPYALKYALKREFKELKD 391
>gi|358372641|dbj|GAA89243.1| transcription initiation factor IIF subunit beta [Aspergillus
kawachii IFO 4308]
Length = 383
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP---MP 150
+ ++ G + +F+ P EN E + +L ++ + + R+ ID G ++P +P
Sbjct: 190 QTALVGSVSEEFNCLPV-EN-EEFRRLSEKKALEALKPKRETVFIDKIPGKMLQPRNALP 247
Query: 151 GMMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
G F + +P +PK E K TR + E+ D++++ F W + L QPE
Sbjct: 248 GE--KGAFVQATRPAKPKAQENKTTRMPQNELLDLIYQCFREYKYWPFKNLKARLRQPEA 305
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
+LK L+ + G ++ELKPE +++
Sbjct: 306 YLKQTLEMVAHLVKAGDFAMTWELKPEARES 336
>gi|342879567|gb|EGU80812.1| hypothetical protein FOXB_08679 [Fusarium oxysporum Fo5176]
Length = 369
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 68 NAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNK 127
N P+R S D P + ++ K + GKI + PH ++ E ++ +++
Sbjct: 166 NGPERPSYDRRSRYQPY--YRKAVPKKTKIFGKIHYDVRVEPHGKDEEE--RVLQQKILD 221
Query: 128 YMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEK--------KKPQPKGSEVKRTRRDRG 179
++Q+I S + PG + F + KP+ KG K R
Sbjct: 222 AEANKSKVQIISRHAASAV-VNPGTTRAAEFGDSFIKNIAATAKPK-KGEVFKAARIPEN 279
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
++ D++F+ F + W+++ L Q+ QPEQ+L+ +L+ + V N G Y L Y+
Sbjct: 280 QLLDLIFECFRQYQYWSVKALRQKLQQPEQYLRQVLEKIAVLNKSGRFANQYCLSDAYR 338
>gi|258577985|ref|XP_002543174.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903440|gb|EEP77841.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 295
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGM- 152
+ ++ K+ ++F+ P EN E Y ++ +R + + ++ + I+ G ++P
Sbjct: 100 QTAIAAKVHDEFNCLPV-EN-EEYQRIAEKRALEALKPKKETKFIERVTGKMLQPKTAQD 157
Query: 153 MISTGFTE-KKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ F + K P+ + + K TR + E+ D+++ F R W + L E QPE +L
Sbjct: 158 ADKSNFIQVTKPPKVRAQDNKTTRMPQNELLDLVYACFRRYRYWPFKSLKAELKQPEAYL 217
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
K L+ + G ++ELKPE ++A
Sbjct: 218 KQTLEMVAHLVKSGDFAMTWELKPEAREA 246
>gi|303321147|ref|XP_003070568.1| Transcription initiation factor IIF, beta subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240110264|gb|EER28423.1| Transcription initiation factor IIF, beta subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320035964|gb|EFW17904.1| transcription initiation factor iif [Coccidioides posadasii str.
Silveira]
Length = 382
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
+ ++ ++ ++F+ P EN E Y ++ +R + + R + I+ G ++P
Sbjct: 187 QTAIAARVHDEFNCLPV-EN-EEYHRIAEKRALEALKPKRNTKFIERVTGKMLQPKTAQA 244
Query: 154 I--STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
S K P+ + + K R + E+ D+++ F R W + L E QPE +L
Sbjct: 245 ADKSNFIQVTKPPRIRTQDNKTARMPQNELLDLIYACFRRYRYWPFKSLKAELKQPEAYL 304
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
K L+ + G ++ELKPE ++A+
Sbjct: 305 KQTLEMVAHLVKSGDFAMTWELKPEAREAS 334
>gi|340516471|gb|EGR46719.1| transcription factor IIF beta subunit [Trichoderma reesei QM6a]
Length = 357
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
K + GKI+ +D+R N+ +L +R + ++Q+I + S + PG
Sbjct: 175 KTKIFGKIR--YDLRVEPRNLREEEELLAKRIFEAENSKSKLQIISRNKASSI-INPGSA 231
Query: 154 IST---GFTEKKKP---QPKGSEV-KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQ 206
S G K P +PK +EV K R + ++ D++F F + W+++ L Q T Q
Sbjct: 232 GSVNWGGNFIKNAPSVLKPKKTEVLKAARIPKNQLLDLIFDCFRQYQYWSMKALRQRTQQ 291
Query: 207 PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
P+ +L+ +L+++ V N G Y L Y+
Sbjct: 292 PDSYLRQVLEEVAVLNKSGPFANHYCLSEAYR 323
>gi|402467254|gb|EJW02583.1| hypothetical protein EDEG_03016 [Edhazardia aedis USNM 41457]
Length = 231
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 33/243 (13%)
Query: 1 MWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVILSIDPLQSNEDSSSSSSSSSTRFTM- 59
+WL K PA+++ L+ + ++ VI ++ N + + +S S FT+
Sbjct: 12 VWLAKFPAIITEKLQKMNPES-----------VIGTM-----NYEKNEQNSQSKITFTLS 55
Query: 60 -ELISTESGNAPKRYSMDMSKDLIPMSVF-AESSNGKISVEGKIKNKFDMRP--HHENME 115
E+++ P +Y + + M + E KI EG IK + ++RP +HE +
Sbjct: 56 DEMLAL---GLPSQYDIVFNDVRTNMYILKLEGLQSKI--EGTIKKECNIRPKINHEYLN 110
Query: 116 NYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTR 175
+L E+ N + K + + + N + + G+ ++K+K SE KR R
Sbjct: 111 FKKRLAEEKRN--IQKCCETITLKDVNMAE--KVLGVADIEFLSKKRKKML--SEKKRER 164
Query: 176 RDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKP 235
E +++F +E +WT++ + +QP F + ++ ++C+ NK ++ +ELKP
Sbjct: 165 TGSSEALNMIFMAYEESESWTVKDMAARINQPVAFTQQLMNEICIL-NKRDHRNLWELKP 223
Query: 236 EYK 238
YK
Sbjct: 224 LYK 226
>gi|254585803|ref|XP_002498469.1| ZYRO0G11022p [Zygosaccharomyces rouxii]
gi|238941363|emb|CAR29536.1| ZYRO0G11022p [Zygosaccharomyces rouxii]
Length = 388
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQ-IQVIDNDNGSHMRPMPGM 152
K S+ G + ++ + P N NY K+ +R N +++ I +D G M GM
Sbjct: 200 KTSITGTVCHECQVMPSM-NDPNYHKIVEQRRNLIKNNNKERITTLDETVGVTM-SHTGM 257
Query: 153 MI---STGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+ ++ F + + + K S K R + E+ D +FKLF+ W+L+ L + T QPE
Sbjct: 258 SMRGDNSNFLKVGREKAK-SNTKSIRMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEA 316
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
LK+ L + KG Y L+PEYK+
Sbjct: 317 HLKECLDKVATLVKKGPYAFKYTLRPEYKR 346
>gi|255715141|ref|XP_002553852.1| KLTH0E08646p [Lachancea thermotolerans]
gi|238935234|emb|CAR23415.1| KLTH0E08646p [Lachancea thermotolerans CBS 6340]
Length = 382
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
++ R + E+ D +FKLF+ W+L+ L + T QPE +LK+ L + + KG
Sbjct: 275 IRAIRMPKKELLDFLFKLFDEYDYWSLKGLKERTKQPEVYLKECLDQVAILVKKGPYALK 334
Query: 231 YELKPEYKKAADG 243
Y LK EYK+ +
Sbjct: 335 YTLKTEYKRLKEA 347
>gi|322708595|gb|EFZ00172.1| transcription initiation factor iif [Metarhizium anisopliae ARSEF
23]
Length = 376
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
K + GKI +D+R N+ +L +R + ++Q+I ++ S + PG
Sbjct: 196 KTKIFGKIH--YDVRVEPRNIREEERLLAQRLLDAESSKTKLQIISRNSASAI-INPGTA 252
Query: 154 IST----GFTEKKKP---QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQ 206
S GF + P KG K R + ++ D++F F + W+++ L Q+ Q
Sbjct: 253 GSATWGGGFIKNAPPTVKAKKGEVFKAARIPKNQLLDLIFDCFRQYQYWSMKALRQKLQQ 312
Query: 207 PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
P+ +L+ +L+++ V + G Y L YK A
Sbjct: 313 PDSYLRQVLEEVAVLHKSGRFANHYGLNDAYKDKA 347
>gi|342326290|gb|AEL23060.1| transcription initiation factor IIF [Cherax quadricarinatus]
Length = 88
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K +E ++ R D+ ++ ++++ FE+ + ++ L + T QP LK++LK++C YN K
Sbjct: 19 KKAEGRKARDDKDKVMEMLYAAFEKHQYYNIKDLQKITKQPIMHLKEILKEVCDYNVKNP 78
Query: 227 NQGSYELKPE 236
++ +ELKPE
Sbjct: 79 HKNMWELKPE 88
>gi|308471818|ref|XP_003098139.1| hypothetical protein CRE_11367 [Caenorhabditis remanei]
gi|308269480|gb|EFP13433.1| hypothetical protein CRE_11367 [Caenorhabditis remanei]
Length = 268
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 77 MSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQ 136
+S+D + A G++++EG+I K + RP Y K+ K + ++
Sbjct: 105 LSEDKQALGSEATVKTGRLAIEGRIIKKAECRP--PATSKYMKMKLAHIVKNTQPKKTVK 162
Query: 137 VIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWT 196
+ID +P +S + K + K K R DR + +FK FE+ S +
Sbjct: 163 MIDK-AAVKFKP-----VSVHAEDMIKSKQKKDGAKTYRADRDVLRQALFKAFEKHSFYR 216
Query: 197 LRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
L+ L Q QP ++K++L+++ VYN ++ + LKPEY
Sbjct: 217 LQDLQQLLQQPVSYVKEVLQEIAVYNTAPPHKSLWCLKPEY 257
>gi|322696875|gb|EFY88661.1| transcription initiation factor iif [Metarhizium acridum CQMa 102]
Length = 375
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
K + GKI +D+R N+ +L +R + ++Q+I ++ S + PG
Sbjct: 195 KTKIFGKIH--YDVRVEPRNIREEERLLAQRLLDAESCKSKLQIISRNSASAI-INPGTA 251
Query: 154 IST----GFTEKKKP---QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQ 206
S GF + P KG K R + ++ D++F F + W+++ L Q+ Q
Sbjct: 252 GSATWGGGFIKNAPPTVKAKKGEVFKAARIPKNQLLDLIFDCFRQYQYWSMKALRQKLQQ 311
Query: 207 PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
P+ +L+ +L+++ V + G Y L YK A
Sbjct: 312 PDSYLRQVLEEVAVLHKSGRFANHYGLNDAYKDKA 346
>gi|312070149|ref|XP_003138013.1| hypothetical protein LOAG_02427 [Loa loa]
Length = 279
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 35/151 (23%)
Query: 88 AESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR 147
A+ +G++S+EG++ + D RP +T YM
Sbjct: 154 ADICSGRLSIEGRVVKRADCRP-------------PQTADYMR----------------- 183
Query: 148 PMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
M ++ EK+K + K R D+ + +F FE+ + L L + T QP
Sbjct: 184 -MKMYILQIQAREKQKKEG----AKTVRADKDVVRQAIFHAFEKHQYYRLVDLQKLTSQP 238
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
F+K++L ++ VYN ++ +ELKPEY+
Sbjct: 239 PGFVKEILTEIAVYNTMPPHKSMWELKPEYR 269
>gi|300709319|ref|XP_002996825.1| hypothetical protein NCER_100012 [Nosema ceranae BRL01]
gi|239606151|gb|EEQ83154.1| hypothetical protein NCER_100012 [Nosema ceranae BRL01]
Length = 230
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
KR R D+ E +I+F FE+ +WT+R L T QP F+++++ ++C + K ++ Y
Sbjct: 165 KRERLDKTEAMNIVFNAFEKYESWTVRDLADFTGQPTAFVQEIVNEICNVDKK-EHKSLY 223
Query: 232 ELKPEYK 238
LK EYK
Sbjct: 224 TLKNEYK 230
>gi|296423716|ref|XP_002841399.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637637|emb|CAZ85590.1| unnamed protein product [Tuber melanosporum]
Length = 370
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
+ S+ G ++++ M P E Y + + + QV+D + PG
Sbjct: 184 RTSLVGTVRHECSMSPVIN--EEYKRFQLSKFRQADAPRVTTQVLDPNAAGGNLLAPGTT 241
Query: 154 IST-----GFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPE 208
+T GF + + K ++ K R E+ +F LF W++R + + QPE
Sbjct: 242 GATAKSFAGFVKPTQAVRKTTDNKAARMPHSELLTALFSLFAEHEYWSMRGIRERLFQPE 301
Query: 209 QFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAAD 242
Q+LK L ++ + G G + LK EYK D
Sbjct: 302 QYLKQTLDEIAKMDRNGPFTGKWSLKSEYKNTDD 335
>gi|25151550|ref|NP_741661.1| Protein Y39B6A.36 [Caenorhabditis elegans]
gi|21038853|emb|CAD31828.1| Protein Y39B6A.36 [Caenorhabditis elegans]
Length = 263
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 77 MSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQ 136
+S+D + A GK+++EG+I K + RP Y K+ K + ++
Sbjct: 101 LSEDKQGLGADAPIKTGKLAIEGRIIKKAECRP--PATSKYMKMKLAHIVKNTQPKKTVK 158
Query: 137 VIDNDNGSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWT 196
+I+ +P +S + K + K K R DR + +FK FE+ S +
Sbjct: 159 MIEK-AAVKFKP-----VSVHAEDMIKSKQKKDGAKTYRADRDVLRGALFKAFEKHSFYR 212
Query: 197 LRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
L+ L Q QP ++K++L+++ VYN ++ + LKPEY
Sbjct: 213 LQDLQQLLQQPVSYVKEVLQEIAVYNTAPPHKSLWCLKPEY 253
>gi|350633101|gb|EHA21467.1| transcription initiation factor IIF, beta subunit [Aspergillus
niger ATCC 1015]
Length = 383
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP---MP 150
+ ++ G + +F+ P EN E + +L ++ + + R+ ID G ++P +P
Sbjct: 190 QTALVGSVSEEFNCLPV-EN-EEFRRLSEKKALEALKPKRETVFIDKIPGKMLQPRNALP 247
Query: 151 GMMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
G F + +P + K E K TR + E+ D++++ F W + L QPE
Sbjct: 248 GE--KGAFVQATRPVKAKAQENKTTRMPQNELLDLIYQCFREYKYWPFKNLKARLRQPEA 305
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
+LK L+ + G ++ELKPE +++
Sbjct: 306 YLKQTLEMVAHLVKAGDFAMTWELKPEARES 336
>gi|346320883|gb|EGX90483.1| transcription initiation factor iif [Cordyceps militaris CM01]
Length = 382
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 70 PKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYM 129
P+R++ D P F ++ K V GKI +D+R N + ++ +
Sbjct: 180 PQRHTFDRKSRFQPY--FRKAIPKKTKVFGKIH--YDVRVEPRNTGEEERYLGQQLFQAE 235
Query: 130 TKSRQIQVIDNDNGSHMRPMPGMMISTGFTE---KKKP---QPKGSEV-KRTRRDRGEME 182
++Q+I + S + PG + G+ K P +PK E+ K R + ++
Sbjct: 236 HSRAKLQIISRNTASSI-INPGTAGAVGWAGNFIKNTPSLVKPKKGEIFKAARIPKNQLL 294
Query: 183 DIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
D++F F W+++ L Q T QP+ +L+ +L+++ V N G Y L Y+
Sbjct: 295 DLIFDCFRLYQYWSMKALRQRTQQPDSYLRQVLEEVAVLNKSGPFANHYCLSDAYR 350
>gi|400601426|gb|EJP69069.1| transcription initiation factor IIF [Beauveria bassiana ARSEF 2860]
Length = 697
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 66 SGNAPKRYSMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERT 125
G P+R + D P + ++ K + GKI +D+R N + ++
Sbjct: 175 GGVGPQRNTYDRKSRFQPY--YRKAIPKKTKIFGKIH--YDVRVEPRNTGEEERYLGQQL 230
Query: 126 NKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTEK--------KKPQPKGSEVKRTRRD 177
+ ++Q+I + S + PG + G+ KP+ KG K R
Sbjct: 231 FQAEHSKAKLQIISRNTASSI-INPGTAGAVGWAGNFIKNTPSLVKPK-KGENFKAARIP 288
Query: 178 RGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
+ ++ D++F F + W+++ L Q T QP+ +L+ +L+++ V N G Y L Y
Sbjct: 289 KNQLLDLIFDCFRQYQYWSMKALRQRTQQPDSYLRQVLEEVAVLNKSGPFANHYCLSEAY 348
Query: 238 KKAA 241
+ A
Sbjct: 349 RDKA 352
>gi|452819715|gb|EME26769.1| transcription initiation factor IIF beta subunit (TFIIF-beta)
family protein [Galdieria sulphuraria]
Length = 306
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 185 MFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK------ 238
+F+LFER+ W++R+L E P LK ++ ++C + G +G YELK EYK
Sbjct: 212 LFQLFERKPRWSIRELNNEIQIPTSRLKTVVNEVCQIHRSGPLRGQYELKDEYKTKQQRD 271
Query: 239 -KAADGPA 245
AAD A
Sbjct: 272 ETAADAAA 279
>gi|45199020|ref|NP_986049.1| AFR502Cp [Ashbya gossypii ATCC 10895]
gi|44985095|gb|AAS53873.1| AFR502Cp [Ashbya gossypii ATCC 10895]
gi|374109280|gb|AEY98186.1| FAFR502Cp [Ashbya gossypii FDAG1]
Length = 407
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
E+ D +FKLF+ W+L+ L + T QPE +LK+ L + + KG Y LK EYKK
Sbjct: 299 ELLDYLFKLFDEYDYWSLKGLKERTRQPEAYLKESLDQVALLVKKGPYALKYTLKTEYKK 358
Query: 240 AADGPAS 246
+ S
Sbjct: 359 LKEAERS 365
>gi|154283733|ref|XP_001542662.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410842|gb|EDN06230.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 369
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 115 ENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP--MPGMMISTGFTEKKKPQPKGSEVK 172
E Y ++ R + R+ I +G ++P + ST K P+ + E K
Sbjct: 191 EEYQRMAEARALDVLKPKRETLYIGKVSGEMLKPKTVAAADKSTFIQVAKPPKVRAQENK 250
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R + E+ D+++ F + W + L E QPE +LK L+ + G ++E
Sbjct: 251 TARMPQNELLDLIYGCFRQHKYWPFKSLKAELKQPEAYLKQTLEMVAHLVKSGDFAMTWE 310
Query: 233 LKPEYKKA 240
LKPE +++
Sbjct: 311 LKPEARES 318
>gi|321255194|ref|XP_003193340.1| hypothetical protein CGB_D1830W [Cryptococcus gattii WM276]
gi|317459810|gb|ADV21553.1| Hypothetical protein CGB_D1830W [Cryptococcus gattii WM276]
Length = 336
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
R +R E+ D +F+ F W L L Q +QP+ +L+++L+D+ +G QG ++L
Sbjct: 230 ARLERHELTDRIFQCFRDHPYWALGALKQTLEQPDAWLREVLRDVAEQVKEGQYQGYWQL 289
Query: 234 KPEYKKAA 241
KP +++ A
Sbjct: 290 KPVWREDA 297
>gi|405119596|gb|AFR94368.1| hypothetical protein CNAG_05103 [Cryptococcus neoformans var.
grubii H99]
Length = 336
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
R +R E+ D +F+ F W L L Q +QP+ +L+++L+D+ +G QG ++L
Sbjct: 230 ARLERHELTDRIFQCFRDHPYWALGALKQTLEQPDAWLREVLRDVAEQVKEGQYQGYWQL 289
Query: 234 KPEYKKAA 241
KP +++ A
Sbjct: 290 KPVWREDA 297
>gi|363748542|ref|XP_003644489.1| hypothetical protein Ecym_1446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888121|gb|AET37672.1| hypothetical protein Ecym_1446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 414
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 180 EMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
E+ D +FKLF+ W+L+ L + T QPE +LK+ L + + KG Y LK EYKK
Sbjct: 301 ELLDYLFKLFDEYDYWSLKGLKERTRQPEAYLKESLDQVALLVKKGPYALKYTLKTEYKK 360
Query: 240 AADG 243
+
Sbjct: 361 LKEA 364
>gi|452987606|gb|EME87361.1| hypothetical protein MYCFIDRAFT_212854 [Pseudocercospora fijiensis
CIRAD86]
Length = 403
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 110 HHENMENYGKLCRERTNKYMTKSRQIQVIDND----NGSHMRPMPGM-----MISTGFTE 160
HHE + N + + T +Y T++ Q +I + N S PGM I + ++
Sbjct: 220 HHEAVAN--PVDDDSTFQYFTQNYQKALIGSTKTRFNDSTKLRHPGMDNDSFNIGSLTSK 277
Query: 161 KKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCV 220
+K + K + K R D+ ++ D + F+ W+LR L Q QPE ++K+ L D+ V
Sbjct: 278 PRKGKKKVPKEKAVRMDKDKLLDALKNCFKEYQYWSLRALRQRLQQPEVYIKETLDDIAV 337
Query: 221 YNNKGSNQGSYELKPEYKK 239
G +Y+LKPEY++
Sbjct: 338 LMRSGDFVQNYKLKPEYER 356
>gi|70983648|ref|XP_747351.1| transcription initiation factor iif, beta subunit [Aspergillus
fumigatus Af293]
gi|66844977|gb|EAL85313.1| transcription initiation factor iif, beta subunit [Aspergillus
fumigatus Af293]
gi|159123644|gb|EDP48763.1| transcription initiation factor iif, beta subunit [Aspergillus
fumigatus A1163]
Length = 374
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP---MP 150
+ ++ G + +F+ P EN E + +L +R + + R+ ID G ++ +P
Sbjct: 179 QTALVGGVSEEFNCLPV-EN-EEFRRLSEKRALEALKPKRETVFIDKVPGKLLQARNVLP 236
Query: 151 GMMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
G F + KP + K E K TR + E+ D++++ F W + L QPE
Sbjct: 237 GE--KGAFVQATKPVKAKAQENKTTRMPQNELLDLIYQCFREYKYWPFKTLKARLRQPEA 294
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPE 236
+LK L+ + G ++ELKPE
Sbjct: 295 YLKQTLEMVAHLVKSGDFAMTWELKPE 321
>gi|119484622|ref|XP_001262090.1| transcription initiation factor iif, beta subunit [Neosartorya
fischeri NRRL 181]
gi|119410246|gb|EAW20193.1| transcription initiation factor iif, beta subunit [Neosartorya
fischeri NRRL 181]
Length = 374
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP---MP 150
+ ++ G + +F+ P EN E + +L +R + + R+ ID G ++ +P
Sbjct: 179 QTALVGGVSEEFNCLPV-EN-EEFRRLSEKRALEALKPKRETVFIDKVPGKLLQARNVLP 236
Query: 151 GMMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
G F + KP + K E K TR + E+ D++++ F W + L QPE
Sbjct: 237 GE--KGAFVQATKPVKAKAQENKTTRMPQNELLDLIYQCFREYKYWPFKTLKARLRQPEA 294
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPE 236
+LK L+ + G ++ELKPE
Sbjct: 295 YLKQTLEMVAHLVKSGDFAMTWELKPE 321
>gi|58261296|ref|XP_568058.1| hypothetical protein CNL05180 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134115671|ref|XP_773549.1| hypothetical protein CNBI1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256175|gb|EAL18902.1| hypothetical protein CNBI1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230140|gb|AAW46541.1| hypothetical protein CNL05180 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 336
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
R +R E+ D +F+ F W L L Q +QP+ +L+++L+D+ +G QG ++L
Sbjct: 230 ARLERHELTDRIFQCFRDHPYWALGALKQTLEQPDAWLREVLRDVAEQVKEGQYQGYWQL 289
Query: 234 KPEYKK 239
KP +++
Sbjct: 290 KPVWRE 295
>gi|353242683|emb|CCA74305.1| hypothetical protein PIIN_08258 [Piriformospora indica DSM 11827]
Length = 331
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 166 PKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKG 225
PK + R + ++ D +F F ++++W+++ L Q QPE +L+++L ++ + G
Sbjct: 198 PKQPFERMARMAKNDLLDALFHHFRQKTHWSIKDLRQRVQQPEVYLREVLNEIAILERSG 257
Query: 226 SNQGSYELKPEY 237
N G Y L Y
Sbjct: 258 PNNGMYRLTENY 269
>gi|408391403|gb|EKJ70781.1| hypothetical protein FPSE_09074 [Fusarium pseudograminearum CS3096]
Length = 363
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHM-RPMPGM 152
+ + GKI +D+R ++ +L +++ + ++Q+I S + P
Sbjct: 184 RTKIFGKIH--YDVRVEPRDIREEERLLQQKLLEAEGNKSKLQIISQSAASSIVAPGSAG 241
Query: 153 MISTGFTEKK------KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQ 206
+S G + K KP+ KG K R ++ D++F+ F + W+++ L Q+ Q
Sbjct: 242 AVSWGGSFIKNTASTAKPK-KGEVFKAARIPENQLLDLIFECFRQYQYWSMKALRQKLQQ 300
Query: 207 PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
P+Q+L+ +L+ + V N G Y L Y+
Sbjct: 301 PDQYLRQVLEKIAVLNKSGRFANHYCLSDAYR 332
>gi|302922467|ref|XP_003053471.1| hypothetical protein NECHADRAFT_74647 [Nectria haematococca mpVI
77-13-4]
gi|256734412|gb|EEU47758.1| hypothetical protein NECHADRAFT_74647 [Nectria haematococca mpVI
77-13-4]
Length = 369
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVID-NDNGSHMRPMPGM 152
+ V GKI +D+R ++ +L +R ++++I N S + P
Sbjct: 191 RTKVFGKIH--YDVRVEPRDVREEERLLAQRLQDAEQSKSKLKIISRNKASSIINPGATG 248
Query: 153 MISTG--FTEKKKP--QPKGSEV-KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
S G F + P +PK EV K R ++ D++F+ F + W+++ L Q+ QP
Sbjct: 249 SASWGGNFIKNTAPINKPKKGEVFKAARIPENQLLDLIFECFRQYQYWSMKALRQKLQQP 308
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+Q+L+ +L+ + V N G Y L Y+
Sbjct: 309 DQYLRQVLEKIAVLNKSGRFANHYCLSDAYR 339
>gi|67522162|ref|XP_659142.1| hypothetical protein AN1538.2 [Aspergillus nidulans FGSC A4]
gi|40745089|gb|EAA64245.1| hypothetical protein AN1538.2 [Aspergillus nidulans FGSC A4]
gi|259486863|tpe|CBF85067.1| TPA: transcription initiation factor iif, beta subunit
(AFU_orthologue; AFUA_8G05490) [Aspergillus nidulans
FGSC A4]
Length = 357
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR---PMP 150
+ ++ G++K +F+ P EN E + L ++ + + R+++ +D ++ +P
Sbjct: 167 RTALVGQVKEEFNCLPV-EN-EEFRILSEKKALEALKPRREVKYVDKMPAKLLQQRHALP 224
Query: 151 GMMISTGFTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
G F + KP + K E K TR + E+ D++++ F W + L QPE
Sbjct: 225 GE--QGAFVQATKPAKLKAQENKTTRMPQNELLDLIYQCFREYRYWPFKTLKARLRQPEA 282
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
+LK L+ + G ++ELKPE +++
Sbjct: 283 YLKQTLEMIAHLVKSGDFAMTWELKPEARES 313
>gi|453089619|gb|EMF17659.1| TFIIF_beta-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 361
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 101 IKNKFDMRPHHEN------MENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMI 154
I N+FDM P + E+Y S++++ DN S + G +
Sbjct: 178 IANEFDMHPVEDQSSLDYFAESYRNALNAGNKTTFVNSQRVRHPGQDNESFVF---GTLT 234
Query: 155 S-TGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKD 213
S G KK K + K R ++ + D + F+ + W+L+ L Q QPE ++K+
Sbjct: 235 SKVGGAGNKK---KAIKEKAVRMEKAALLDALKMCFKEYTYWSLKALRQRLRQPEAYIKE 291
Query: 214 MLKDLCVYNNKGSNQGSYELKPEYK 238
L ++ +G +Y+LKPEYK
Sbjct: 292 TLDEIATLMRQGDFVQNYKLKPEYK 316
>gi|260946685|ref|XP_002617640.1| hypothetical protein CLUG_03084 [Clavispora lusitaniae ATCC 42720]
gi|238849494|gb|EEQ38958.1| hypothetical protein CLUG_03084 [Clavispora lusitaniae ATCC 42720]
Length = 392
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 60 ELISTESGNAPKRY------SMDMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHEN 113
EL ES P ++ D K IP F ++ K ++ GKI + + P +N
Sbjct: 171 ELDKNESPRRPNKFFRVQKNGPDGEKKYIP---FVKTIPKKTNLVGKIVHDCQIVPS-KN 226
Query: 114 MENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMI---STGFTEKKKPQPKG-S 169
Y ++ +R N +T+ R N+ ++ G + ST K PK +
Sbjct: 227 DSRYAQMLLKRQNMPLTQERPKVTFLNEIPGVVQSQAGPSLTGKSTSLFLKSTTGPKSKT 286
Query: 170 EVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQG 229
E + R + ++ D++F+LFE W+++ L + T QPE +LK+ L+ + N KG
Sbjct: 287 EGRAIRMPKKDLLDLLFRLFEEYEYWSMKGLKERTRQPETYLKESLESIANLNKKGPYTS 346
Query: 230 SYELKPEYKKAADG 243
Y LKPEYK+ D
Sbjct: 347 KYNLKPEYKRLRDA 360
>gi|326429934|gb|EGD75504.1| hypothetical protein PTSG_06576 [Salpingoeca sp. ATCC 50818]
Length = 251
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 151 GMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQF 210
G++++ + +K E +TR+ E+++++F LF + +TL QL Q T QP Q+
Sbjct: 166 GLLMTQSLIKTQK-----RERTKTRKPEKEVKELLFGLFRKHEYYTLDQLSQLTQQPAQY 220
Query: 211 LKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
L +L+ + V G ++ + L+ +++
Sbjct: 221 LASILRTVAVREQSGEHRNKWHLRRAFRE 249
>gi|115401544|ref|XP_001216360.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190301|gb|EAU32001.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 394
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP---MP 150
+ ++ G + +F+ P EN E + +L ++ + + R+ ID G ++P +P
Sbjct: 179 QTALVGSVSEEFNCLPV-EN-EEFQRLSEKKALEALKPKRETVFIDKVPGKLLQPRNALP 236
Query: 151 G----------------MMISTGFT---EKKKPQPKGSEVKRTRRDRGEMEDIMFKLFER 191
G IS +T K P+ K E K TR + E+ D++++ F
Sbjct: 237 GEKSAFVVRTFPFSSAYFRISMTYTIQQATKPPKLKPQENKTTRMPQNELLDLIYQCFRE 296
Query: 192 QSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
W + L QPE +LK L+ + G ++ELKPE K+++
Sbjct: 297 YKYWPFKTLRARLRQPEAYLKQTLEMVAHLVKSGDFAMTWELKPEAKESS 346
>gi|46108468|ref|XP_381292.1| hypothetical protein FG01116.1 [Gibberella zeae PH-1]
Length = 363
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHM-RPMPGM 152
+ + GK+ +D+R ++ +L +++ + ++Q+I S + P
Sbjct: 184 RTKIFGKVH--YDVRVEPRDIREEERLLQQKLLEADGNKSKLQIISQSAASSIVAPGSAG 241
Query: 153 MISTGFTEKK------KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQ 206
+S G + K KP+ KG K R ++ D++F+ F + W+++ L Q+ Q
Sbjct: 242 AVSWGGSFIKNTASTAKPK-KGEVFKAARIPENQLLDLIFECFRQYQYWSMKALRQKLQQ 300
Query: 207 PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
P+Q+L+ +L+ + V N G Y L Y+
Sbjct: 301 PDQYLRQVLEKIAVLNKSGRFANHYCLSDAYR 332
>gi|342319205|gb|EGU11155.1| Transcription initiation factor IIF subunit beta [Rhodotorula
glutinis ATCC 204091]
Length = 409
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 55/290 (18%)
Query: 1 MWLMKCPALVSRSLKIPSSD----------NDDDDSARPVAKVILSIDPLQSNEDSSSSS 50
+WL K P + + S+ ++ D S +P VIL P S++ + S
Sbjct: 53 VWLCKVPRFLLEKWQQAQSEGEILGRLRVWDEKDASGQPKIAVILQDSPSTSSQPTPGPS 112
Query: 51 SSSSTRFTMEL---ISTESGNA-PKRYSMDM----SKDLIPMSVFAES-----SNGK--- 94
SS ++ ++ S +G+ P Y + M S++L VF E +G+
Sbjct: 113 SSRDSKPDLKGKRPASMSAGDGVPTEYKLTMQNSESRNLF---VFGEKVEEVMESGEEGA 169
Query: 95 ------ISVEGKIKNKFDMRPHHENMENYG---KLCRERTNKYMTKSRQIQVIDNDNGSH 145
S+ G + ++ + P + + ++ RER K R ++ ++ D+ +
Sbjct: 170 RKKRRITSLLGTVAHECSLTPSISSADASAAYARILRERQRKAAEPKRTLKRLEVDDATA 229
Query: 146 MRPMPGMMIS------TGFTE-----------KKKPQPKGSEVKRTRRDRGEMEDIMFKL 188
R GM + F E K KP + + T+ ++ + D +F
Sbjct: 230 NRLASGMGAAGIKGRVATFNELFFIRAQNTSSKAKPGSSAAAQRNTKMEKPALLDEIFTR 289
Query: 189 FERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
F W+ R L QP+ +L+++L ++ KG + LKPE+K
Sbjct: 290 FSSAPYWSFRTLNDHLRQPQTYLREVLGEVAHLVPKGPYANMWALKPEFK 339
>gi|190346005|gb|EDK37990.2| hypothetical protein PGUG_02088 [Meyerozyma guilliermondii ATCC
6260]
Length = 380
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 65 ESGNAPKRYSM--------DMSKDLIPMSVFAESSNGKISVEGKIKNKFDMRPHHENMEN 116
ES +AP+ +S D + +P+ ++ K + GKI + + P +N
Sbjct: 169 ESASAPRGHSSYSNSTTGNDAGEKFVPI---VKTIPKKTKLSGKICHDCQIVPS-KNDRQ 224
Query: 117 YGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMISTGFTE---KKKPQPKGS-EVK 172
Y K R N + K R + N+ ++ G + G K P+ E +
Sbjct: 225 YSKFLNRRQNIQVAKPRPRVTLLNEIPGVLQSNAGPSVRGGNASVFLKTTTVPRSKIEGR 284
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R R ++ D++F+LFE W+++ L + T QPE FLK+ L + + KG Y
Sbjct: 285 AVRMPRKDLLDLLFRLFEEYEYWSMKGLKERTRQPESFLKECLDSIAILIKKGPYTSKYS 344
Query: 233 LKPEYKKAADG 243
L+PEYKK ++
Sbjct: 345 LRPEYKKLSEA 355
>gi|171684567|ref|XP_001907225.1| hypothetical protein [Podospora anserina S mat+]
gi|170942244|emb|CAP67896.1| unnamed protein product [Podospora anserina S mat+]
Length = 358
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
K + G+IK++ P N E + RT K ++++V + G++ R + G
Sbjct: 181 KTRIAGRIKHEVLCTPA-ANPET-ERFLFSRTKKTQETKKEVKVYEA--GTNPRGLSGDK 236
Query: 154 ISTGFTE--KKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
G+ + +K + K E K R ++ D + + F R W+++ + QPE +L
Sbjct: 237 EWAGYLKVTEKPTKAKKMENKTARWPENQLLDAIAECFGRHRFWSIKAIRAVIPQPEVYL 296
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYK 238
++ L+ + V + GS +ELK EYK
Sbjct: 297 RETLEKIAVLHRSGSFANHWELKAEYK 323
>gi|425765785|gb|EKV04433.1| Transcription initiation factor iif, beta subunit [Penicillium
digitatum PHI26]
gi|425783911|gb|EKV21727.1| Transcription initiation factor iif, beta subunit [Penicillium
digitatum Pd1]
Length = 363
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 96 SVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIS 155
++ G + +F+ P EN E + ++ +R + + ++ ID G ++ +
Sbjct: 179 ALAGAVSEEFNCLPV-EN-EEFRRISEKRALEALKPRKETVFIDKIPGKIIQARHALPTE 236
Query: 156 TG-FTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKD 213
G F + +P + K E K TR + E+ D++F+ F W + L QPE +LK
Sbjct: 237 RGQFVQATRPSKGKAQENKSTRMPQNELLDLIFQCFREFKYWPFKTLKARLAQPEAYLKQ 296
Query: 214 MLKDLCVYNNKGSNQGSYELKPE 236
L+ + G ++ELKPE
Sbjct: 297 TLEMVAHLVKAGDFAMTWELKPE 319
>gi|255931265|ref|XP_002557189.1| Pc12g03030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581808|emb|CAP79930.1| Pc12g03030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 96 SVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIS 155
++ G + +F+ P EN E + ++ +R + + ++ ID G ++ +
Sbjct: 179 ALAGAVSEEFNCLPV-EN-EEFRRISEKRALEALKPRKETVFIDKIPGKIIQARHALPTE 236
Query: 156 TG-FTEKKKP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKD 213
G F + +P + K E K TR + E+ D++F+ F W + L QPE +LK
Sbjct: 237 KGQFVQATRPIKGKSQENKSTRMPQNELLDLIFQCFREFKYWPFKTLKARLAQPEAYLKQ 296
Query: 214 MLKDLCVYNNKGSNQGSYELKPE 236
L+ + G ++ELKPE
Sbjct: 297 TLEMVAHLVKAGDFAMTWELKPE 319
>gi|449017678|dbj|BAM81080.1| similar to transcription initiation factor IIF beta subunit
[Cyanidioschyzon merolae strain 10D]
Length = 476
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 185 MFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+F+LFE Q W L+ L + P LK ++ +LC YN +G +G Y LK K
Sbjct: 335 VFRLFEEQFWWRLQDLAENLQIPAARLKPVISELCDYNQRGPYRGMYSLKDHLK 388
>gi|116192479|ref|XP_001222052.1| hypothetical protein CHGG_05957 [Chaetomium globosum CBS 148.51]
gi|88181870|gb|EAQ89338.1| hypothetical protein CHGG_05957 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 159 TEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDL 218
T++K + K E K TR ++ D + + F W+++ + QPE +L++ L+ +
Sbjct: 145 TKEKPTKAKKMENKATRWPENQLLDAIARCFSEHKYWSIKAFRGKIPQPEAYLRETLEKV 204
Query: 219 CVYNNKGSNQGSYELKPEYK 238
V + G+ + LKPEY+
Sbjct: 205 AVLHRSGTFANHWSLKPEYQ 224
>gi|121719914|ref|XP_001276655.1| transcription initiation factor iif, beta subunit [Aspergillus
clavatus NRRL 1]
gi|119404867|gb|EAW15229.1| transcription initiation factor iif, beta subunit [Aspergillus
clavatus NRRL 1]
Length = 374
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRP---MP 150
+ ++ G + +F+ P EN E + L ++ + + R+ ID G +R +P
Sbjct: 179 QTALVGGVNEEFNCLPV-EN-EEFRLLSEKKALEALKPKRETVFIDKVPGKLLRARNALP 236
Query: 151 G---MMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
G + T K K Q E K TR + E+ D++++ F W + L QP
Sbjct: 237 GDKGAFVQAAKTAKAKTQ----ENKTTRMPQNELLDLIYQCFREYKYWPFKTLKARLQQP 292
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPE 236
E +LK L+ + G ++ELKPE
Sbjct: 293 EAYLKQTLEMVAHLVKSGDFAMTWELKPE 321
>gi|317139615|ref|XP_001817641.2| transcription initiation factor iif, beta subunit [Aspergillus
oryzae RIB40]
Length = 374
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGS-----HMRP 148
+ ++ G + +F+ P EN E + L ++ + + R+ ID G H+ P
Sbjct: 180 QTALVGSVSEEFNCLPV-EN-EEFRLLSEQKVLQSLKPKRETVFIDKVPGKLLQARHVLP 237
Query: 149 -MPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
G + K KPQ E K TR + E+ D++++ F W + L QP
Sbjct: 238 GEKGAFVQATKAAKLKPQ----ENKTTRMPQNELLDLIYQCFREYRYWPFKALKARLRQP 293
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
E +LK L+ + G ++ELKPE K+++
Sbjct: 294 EAYLKQTLEMIGHLVKSGDFAMTWELKPEAKESS 327
>gi|367042832|ref|XP_003651796.1| hypothetical protein THITE_2112481 [Thielavia terrestris NRRL 8126]
gi|346999058|gb|AEO65460.1| hypothetical protein THITE_2112481 [Thielavia terrestris NRRL 8126]
Length = 349
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 24/156 (15%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
K + GKIK++ P N + R N ++ ++++ G+M
Sbjct: 171 KTRIAGKIKHEVVCTPVQNAEAN--RFLALRANAAENTQKRTKMVN-----------GLM 217
Query: 154 ISTGFTEKK----------KP-QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQ 202
S G T K KP + K E K TR ++ D + + F W++R
Sbjct: 218 PSQGLTNPKEWDAFLKTREKPTKAKKLENKATRWPENQLLDAIARCFSEHKYWSIRAFRG 277
Query: 203 ETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
QPE +L++ L + V G+ + LKPEY+
Sbjct: 278 RIPQPEAYLRECLDKIAVLQRSGTFANHWSLKPEYQ 313
>gi|391864707|gb|EIT74001.1| hypothetical protein Ao3042_10034 [Aspergillus oryzae 3.042]
Length = 374
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGS-----HMRP 148
+ ++ G + +F+ P EN E + L ++ + + R+ ID G H+ P
Sbjct: 180 QTALVGSVSEEFNCLPV-EN-EEFRLLSEQKVLQSLKPKRETVFIDKVPGKLLQARHVLP 237
Query: 149 -MPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
G + K KPQ E K TR + E+ D++++ F W + L QP
Sbjct: 238 GEKGAFVQATKAAKLKPQ----ENKTTRMPQNELLDLIYQCFREYRYWPFKALKARLRQP 293
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
E +LK L+ + G ++ELKPE K+++
Sbjct: 294 EAYLKQTLEMIGHLVKSGDFAMTWELKPEAKESS 327
>gi|238483049|ref|XP_002372763.1| transcription initiation factor IIF subunit beta, putative
[Aspergillus flavus NRRL3357]
gi|220700813|gb|EED57151.1| transcription initiation factor IIF subunit beta, putative
[Aspergillus flavus NRRL3357]
Length = 374
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGS-----HMRP 148
+ ++ G + +F+ P EN E + L ++ + + R+ ID G H+ P
Sbjct: 180 QTALVGSVSEEFNCLPV-EN-EEFRLLSEQKVLQSLKPKRETVFIDKVPGKLLQARHVLP 237
Query: 149 -MPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQP 207
G + K KPQ E K TR + E+ D++++ F W + L QP
Sbjct: 238 GEKGAFVQATKAAKLKPQ----ENKTTRMPQNELLDLIYQCFREYRYWPFKALKARLRQP 293
Query: 208 EQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
E +LK L+ + G ++ELKPE K+++
Sbjct: 294 EAYLKQTLEMIGHLVKSGDFAMTWELKPEAKESS 327
>gi|401882364|gb|EJT46625.1| hypothetical protein A1Q1_04802 [Trichosporon asahii var. asahii
CBS 2479]
gi|406702158|gb|EKD05223.1| hypothetical protein A1Q2_00453 [Trichosporon asahii var. asahii
CBS 8904]
Length = 327
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
R +R E+ D +F LF + W++ L Q QP+ +L+++LKD+ +G +EL
Sbjct: 227 ARLERNELIDRLFALFTEKPYWSITALKQTLKQPDAWLREVLKDVASLIKEGQYANMWEL 286
Query: 234 KPEYKKAADGPA 245
K +K G A
Sbjct: 287 KENWKDVNVGGA 298
>gi|146420929|ref|XP_001486417.1| hypothetical protein PGUG_02088 [Meyerozyma guilliermondii ATCC
6260]
Length = 380
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMM 153
K + GKI + + P +N Y K R N + K R + N+ ++ G
Sbjct: 203 KTKLSGKICHDCQIVPS-KNDRQYSKFLNRRQNIQVAKPRPRVTLLNEIPGVLQSNAGPS 261
Query: 154 ISTG----FTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+ G F + E + R R ++ D++F+LFE W+++ L + T QPE
Sbjct: 262 VRGGNASVFLKTTTVPRSKIEGRAVRMPRKDLLDLLFRLFEEYEYWSMKGLKERTRQPES 321
Query: 210 FLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
FLK+ L + + KG Y L+PEYKK ++
Sbjct: 322 FLKECLDSIAILIKKGPYTSKYSLRPEYKKLSEA 355
>gi|406866036|gb|EKD19076.1| transcription initiation factor IIF [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 367
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 161 KKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCV 220
K++PQ K R + E+ D +F+ F R + W+L+ L E QPE +L++ L + V
Sbjct: 254 KERPQ----MTKTARMPQNELLDRIFECFRRYNYWSLKALRNELKQPEVYLRETLDLIAV 309
Query: 221 YNNKGSNQGSYELKP 235
G G++ LKP
Sbjct: 310 LAKSGKFTGNWYLKP 324
>gi|451849754|gb|EMD63057.1| hypothetical protein COCSADRAFT_37932 [Cochliobolus sativus ND90Pr]
Length = 350
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 152 MMISTGFTEKKKPQPKG--SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+M++ F +P KG + K R R ++ D + LF+ W ++ + Q T QPEQ
Sbjct: 230 IMLNNRFKNFIRPMTKGKSQQNKAARMARSDLIDFLHTLFDEYQYWPMKAIKQRTKQPEQ 289
Query: 210 FLKDMLKDLCVYNNKG 225
+LK++L D+ + G
Sbjct: 290 YLKEVLGDIALLVKSG 305
>gi|452001571|gb|EMD94030.1| hypothetical protein COCHEDRAFT_1020164 [Cochliobolus
heterostrophus C5]
Length = 350
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 152 MMISTGFTEKKKPQPKG--SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQ 209
+M++ F +P KG + K R R ++ D + LF+ W ++ + Q T QPEQ
Sbjct: 230 IMLNNRFKNFIRPMTKGKSQQNKAARMARSDLIDFLHTLFDEYQYWPMKAIKQRTKQPEQ 289
Query: 210 FLKDMLKDLCVYNNKG 225
+LK++L D+ + G
Sbjct: 290 YLKEVLGDIALLVKSG 305
>gi|302831431|ref|XP_002947281.1| hypothetical protein VOLCADRAFT_87484 [Volvox carteri f.
nagariensis]
gi|300267688|gb|EFJ51871.1| hypothetical protein VOLCADRAFT_87484 [Volvox carteri f.
nagariensis]
Length = 358
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 200 LIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADGPAS 246
LI ET QP LK +L+ + +G N+ YELKPEY+ + P S
Sbjct: 210 LITETRQPHMHLKAVLEGIAAQQKRGPNKDKYELKPEYRSKSRAPGS 256
>gi|380488282|emb|CCF37485.1| transcription initiation factor IIF [Colletotrichum higginsianum]
Length = 365
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 162 KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVY 221
K +PK +E + R ++ D + + F R W + L DQPE FL+ L+ + V
Sbjct: 258 KATKPKKAENRAARMSEEQLLDGLMEAFRRYEYWKMSILKARFDQPEAFLRQTLEKIAVL 317
Query: 222 NNKGSNQGSYELKPEYKKAADGPAS 246
N G + + L+ K A G S
Sbjct: 318 NRSGIHANEWSLQEHLKSMASGATS 342
>gi|378729505|gb|EHY55964.1| transcription initiation factor TFIIF beta subunit [Exophiala
dermatitidis NIH/UT8656]
Length = 380
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 170 EVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQG 229
E + R ++ + D + LF + W LR L +QPE +L++ L ++ G G
Sbjct: 272 ETRAARVEKHVLIDKLMDLFRQHRIWGLRDLKARVNQPEAYLRETLSEIAFMWKAGDFNG 331
Query: 230 SYELKPEYKKAA 241
+ELK E+K A
Sbjct: 332 KWELKDEFKSDA 343
>gi|367020804|ref|XP_003659687.1| hypothetical protein MYCTH_2297030 [Myceliophthora thermophila ATCC
42464]
gi|347006954|gb|AEO54442.1| hypothetical protein MYCTH_2297030 [Myceliophthora thermophila ATCC
42464]
Length = 345
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 159 TEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDL 218
T +K + K E K TR ++ D + K F W+++ QPE +L++ L +
Sbjct: 230 TREKPTKAKKMENKATRWPENQLLDAIAKCFSEHKYWSIKAFRGRIPQPEAYLRETLDKV 289
Query: 219 CVYNNKGSNQGSYELKPEYK 238
V + G+ + LKPEY+
Sbjct: 290 AVLHRSGTFANHWSLKPEYE 309
>gi|449297147|gb|EMC93165.1| hypothetical protein BAUCODRAFT_36832 [Baudoinia compniacensis UAMH
10762]
Length = 377
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
R DRG++ D + + F R W+++ L E QPE ++K++L+ + G ++ L
Sbjct: 259 VRMDRGDLLDALQRCFRRYRYWSMKALRNELRQPEVWIKEVLEGIAFLVRSGDFAMNWTL 318
Query: 234 KPE 236
KPE
Sbjct: 319 KPE 321
>gi|341038658|gb|EGS23650.1| putative transcription initiation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 350
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDN--DNGSHMRPMPG 151
K + G+IK++ P +N E + R + Q+Q++D NG R
Sbjct: 173 KTRIAGRIKHEVVCTPA-QNAET-DRFLYLRAQEAQKVREQVQIVDKLPPNGITNRDDWE 230
Query: 152 MMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+ T K+ K E K TR ++ D + K F + W+++ Q QPE ++
Sbjct: 231 NYLKTSTKPTKQ---KKMENKATRWPENQLMDEIAKCFSQHKYWSIKAFRQRIPQPEAYI 287
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYK 238
++ L+ + V G ++ LKPE++
Sbjct: 288 RECLEKVAVLQRSGKFANNWSLKPEFQ 314
>gi|396471048|ref|XP_003838777.1| hypothetical protein LEMA_P024500.1 [Leptosphaeria maculans JN3]
gi|312215346|emb|CBX95298.1| hypothetical protein LEMA_P024500.1 [Leptosphaeria maculans JN3]
Length = 459
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 165 QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNK 224
+PK K R R ++ DI+ F+ W ++ L T QPEQ+LK++L D+
Sbjct: 354 KPKSQLNKAARVARADLIDILHSCFDEYQYWPMKALKARTKQPEQYLKEVLADIAHLVKS 413
Query: 225 GSNQGSYE 232
GS +++
Sbjct: 414 GSFASTWK 421
>gi|268562593|ref|XP_002638649.1| Hypothetical protein CBG23703 [Caenorhabditis briggsae]
Length = 354
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 93/240 (38%), Gaps = 53/240 (22%)
Query: 39 PLQSNEDSSSSSSSSSTRFTMELISTESGNAPKRYSM-----------DMSKDLIPMSVF 87
P +E +SS++++T T S+ P +Y+ +S+D +
Sbjct: 116 PPPKDEGEGTSSTTTNTAVT----SSRVSEIPTQYTFILHDVKGSTMSVLSEDKQALGAE 171
Query: 88 AESSNGKISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMR 147
A GK+++EG+I + + RP Y K+ K + +++ID +
Sbjct: 172 ATVKTGKLAIEGRIMKRAECRP--PATSKYMKMKLAHIVKNTQPKKTVKMIDKA-AVKFK 228
Query: 148 PMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQET--- 204
P ++ + K + K K R DR + +FK FE+ S + L + E
Sbjct: 229 P-----VAVHAEDMIKNKQKKDGAKTYRADRDVLRGALFKAFEKHSYYRLVLKLLEIYLK 283
Query: 205 ---------------------------DQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
QP ++K++L+++ VYN ++ + LKPEY
Sbjct: 284 LVKMGEIQSERSILVLPSRLQDLQNILQQPVSYVKEVLQEIAVYNTAPPHKSLWCLKPEY 343
>gi|346978122|gb|EGY21574.1| transcription initiation factor iif [Verticillium dahliae VdLs.17]
Length = 368
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 172 KRTRRDRGEMEDIMFKLF-ERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
K TR D E+ + + F R W + L +QPE +L+ L+ + V N G +
Sbjct: 271 KATRMDETELREALLDAFTNRFQYWKMSVLKATFNQPEAYLRQELEKIAVMNRSGPHSNE 330
Query: 231 YELKPEYK 238
+E+KPE+K
Sbjct: 331 WEIKPEFK 338
>gi|302411154|ref|XP_003003410.1| transcription initiation factor iif [Verticillium albo-atrum
VaMs.102]
gi|261357315|gb|EEY19743.1| transcription initiation factor iif [Verticillium albo-atrum
VaMs.102]
Length = 368
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 172 KRTRRDRGEMEDIMFKLF-ERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
K TR D E+ + + F R W + L +QPE +L+ L+ + V N G +
Sbjct: 271 KATRMDETELREALLDAFTNRFQYWKMSVLKATFNQPEAYLRQELEKIAVMNRSGPHSNE 330
Query: 231 YELKPEYK 238
+E+KPE+K
Sbjct: 331 WEIKPEFK 338
>gi|189203143|ref|XP_001937907.1| transcription initiation factor IIF [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985006|gb|EDU50494.1| transcription initiation factor IIF [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 348
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKG 225
K + K R R ++ D++ LF+ W ++ + Q T QPEQ+LK++L D+ + G
Sbjct: 245 KSQQNKAARMARSDLIDVLHSLFDEYQYWPMKAIKQRTKQPEQYLKEVLGDIALLVKSG 303
>gi|310793774|gb|EFQ29235.1| transcription initiation factor IIF [Glomerella graminicola M1.001]
Length = 364
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 162 KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVY 221
K +PK +E + R ++ D + + F + W + L DQPE FL+ L+ + V
Sbjct: 258 KATKPKKAENRAARMSEEQLLDGLMEAFRKYEYWKMSILKARFDQPEAFLRQTLEKIAVL 317
Query: 222 NNKGSNQGSYELKPEYKKAADGPAS 246
N G + + L+ K A G S
Sbjct: 318 NRSGIHANEWSLQEHLKSMASGATS 342
>gi|156062600|ref|XP_001597222.1| hypothetical protein SS1G_01416 [Sclerotinia sclerotiorum 1980]
gi|154696752|gb|EDN96490.1| hypothetical protein SS1G_01416 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 363
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 158 FTEKKKPQPKGSEVKRTRRDR---GEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDM 214
F + K P G++ + T+ R E+ D +F F R + W+++ L E QPE +L++
Sbjct: 246 FIKTKNPT-AGTKTQLTKAARMPENELLDRIFDCFRRYNYWSMKALRAELQQPEAYLRET 304
Query: 215 LKDLCVYNNKGSNQGSYELKPE-----YKKAADGPA 245
L+ + G + LKPE Y+ A D A
Sbjct: 305 LEKIAFLAKTGRFATQWSLKPENKLNNYEGAGDAIA 340
>gi|330907654|ref|XP_003295884.1| hypothetical protein PTT_03617 [Pyrenophora teres f. teres 0-1]
gi|311332404|gb|EFQ96017.1| hypothetical protein PTT_03617 [Pyrenophora teres f. teres 0-1]
Length = 354
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKG 225
K + K R R ++ D++ LF+ W ++ + Q T QPEQ+LK++L D+ + G
Sbjct: 251 KSQQNKAARMARSDLIDVLHSLFDEYQYWPMKAIKQRTRQPEQYLKEVLGDIALLVKSG 309
>gi|440634689|gb|ELR04608.1| hypothetical protein GMDG_06890 [Geomyces destructans 20631-21]
Length = 371
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 94 KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYM-----------TKSRQIQVIDNDN 142
K ++ G++ ++ + P N +L +RT M T+SR+ I
Sbjct: 183 KTTLAGRVAHEINCVPVDNPETN--RLLAQRTIAAMQPRNRTVFLSGTRSREAGFIQPGT 240
Query: 143 GSHMRPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQ 202
G + +TG + K G + K R + E+ D +F+ F+ + W+++ L
Sbjct: 241 IRAQEAFGGFIKNTGALKSKS----GQDTKTARMPQNELLDHIFQCFKEYNFWSMKALRA 296
Query: 203 ETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ QPE +L++ L+ + G + LK EYK
Sbjct: 297 KLQQPEAYLRETLEKVADMPRSGRFAMHWTLKKEYK 332
>gi|440473976|gb|ELQ42745.1| hypothetical protein OOU_Y34scaffold00194g58 [Magnaporthe oryzae
Y34]
gi|440485018|gb|ELQ65017.1| hypothetical protein OOW_P131scaffold00538g30 [Magnaporthe oryzae
P131]
Length = 388
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K +E+K R E+ D +F+LF + S + ++ L E QPE +L+ L+ + V + G+
Sbjct: 281 KKTELKAARIPENELLDQIFQLFRKFSYYHMKTLRVELRQPEAYLRQTLEKVAVLHKSGN 340
Query: 227 NQGSYELKPEYKK----AADGPAS 246
++ L + K+ + DGPA+
Sbjct: 341 LTNTWGLTDDAKRSNGISLDGPAT 364
>gi|389632127|ref|XP_003713716.1| hypothetical protein MGG_04761 [Magnaporthe oryzae 70-15]
gi|351646049|gb|EHA53909.1| hypothetical protein MGG_04761 [Magnaporthe oryzae 70-15]
Length = 394
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGS 226
K +E+K R E+ D +F+LF + S + ++ L E QPE +L+ L+ + V + G+
Sbjct: 287 KKTELKAARIPENELLDQIFQLFRKFSYYHMKTLRVELRQPEAYLRQTLEKVAVLHKSGN 346
Query: 227 NQGSYELKPEYKK----AADGPAS 246
++ L + K+ + DGPA+
Sbjct: 347 LTNTWGLTDDAKRSNGISLDGPAT 370
>gi|407040073|gb|EKE39965.1| hypothetical protein ENU1_107980 [Entamoeba nuttalli P19]
Length = 219
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLC-VYNNKGSNQGS 230
KR R + E+ D + +F+ + +T L E QPEQ+LK+ LK +C + + S+
Sbjct: 152 KRVRMNETELTDRILAMFKIKPTYTFNMLNLELKQPEQYLKEQLKKICDLVQSPTSSMKE 211
Query: 231 YELKPEYK 238
Y+LK +Y+
Sbjct: 212 YQLKKDYQ 219
>gi|67473245|ref|XP_652389.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469239|gb|EAL47003.1| hypothetical protein EHI_174950 [Entamoeba histolytica HM-1:IMSS]
gi|449702266|gb|EMD42939.1| Hypothetical protein EHI5A_077970 [Entamoeba histolytica KU27]
Length = 219
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLC-VYNNKGSNQGS 230
KR R + E+ D + +F+ + +T L E QPEQ+LK+ LK +C + + S+
Sbjct: 152 KRVRMNETELTDRILSMFKIKPTYTFNMLNLELKQPEQYLKEQLKKICDLVQSPTSSMKE 211
Query: 231 YELKPEYK 238
Y+LK +Y+
Sbjct: 212 YQLKKDYQ 219
>gi|440299546|gb|ELP92098.1| hypothetical protein EIN_379950 [Entamoeba invadens IP1]
Length = 215
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 167 KGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLC 219
KG KR R D ++++ +F++F ++ T +++ E DQP+Q+LK L LC
Sbjct: 143 KGKVDKRVRMDENQLKNKIFEMFSKKEAMTFQEINTELDQPDQYLKTQLDKLC 195
>gi|167391016|ref|XP_001739603.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896679|gb|EDR24026.1| hypothetical protein EDI_139490 [Entamoeba dispar SAW760]
Length = 219
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLC-VYNNKGSNQGS 230
KR R + E+ D + +F+ + +T L E QPEQ+LK+ LK +C + + S+
Sbjct: 152 KRVRMNETELTDKILSMFKIKPTYTFTMLNLELKQPEQYLKEQLKKICDLVQSPTSSMKE 211
Query: 231 YELKPEYK 238
Y+LK +Y+
Sbjct: 212 YQLKKDYQ 219
>gi|429859735|gb|ELA34503.1| transcription initiation factor iif [Colletotrichum gloeosporioides
Nara gc5]
Length = 367
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 162 KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVY 221
K +PK +E + R ++ D + + F + W + L DQPE FL+ L+ + V
Sbjct: 258 KATKPKKAENRSARMSEEQLLDGLMEAFRKYEYWKMSILKARFDQPEAFLRQTLEKIAVL 317
Query: 222 NNKGSNQGSYELKPEYKKAADG 243
N G + + L+ K A G
Sbjct: 318 NRSGIHANEWSLQEHMKSMASG 339
>gi|169806038|ref|XP_001827764.1| transcription initiation factor IIF RAP30 [Enterocytozoon bieneusi
H348]
gi|161779050|gb|EDQ31076.1| transcription initiation factor IIF RAP30 [Enterocytozoon bieneusi
H348]
Length = 220
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 173 RTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYE 232
R R ++ ++ +++FK FE+ +WT++ L + QP ++++++ ++ + + K N+ +Y
Sbjct: 154 RERLEKPDVLNLIFKAFEKHDSWTVKDLADFSGQPIAYIQEIINEIAILDKK-DNRNTYV 212
Query: 233 LKPEYK 238
LK ++K
Sbjct: 213 LKDQFK 218
>gi|344229087|gb|EGV60973.1| transcription initiation factor IIF, beta subunit [Candida tenuis
ATCC 10573]
gi|344229088|gb|EGV60974.1| hypothetical protein CANTEDRAFT_116016 [Candida tenuis ATCC 10573]
Length = 363
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L + KG Y LKPEYKK D
Sbjct: 284 WSIKGLRERTKQPESYLKESLDSIANLIKKGPYTSKYNLKPEYKKLRDA 332
>gi|354546980|emb|CCE43713.1| hypothetical protein CPAR2_213560 [Candida parapsilosis]
Length = 397
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L + + KG + LKPEY+K D
Sbjct: 315 WSIKGLKERTKQPESYLKESLDSIAILIKKGPYTSKWVLKPEYRKLRDA 363
>gi|336274256|ref|XP_003351882.1| hypothetical protein SMAC_00429 [Sordaria macrospora k-hell]
gi|380096165|emb|CCC06212.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 345
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R ++ D + K F W+++ L QPE F+++ L + V + G+ +
Sbjct: 241 KTARWPENQLLDELAKCFSVYMYWSIKALRSRIPQPEAFIRECLDKIAVIHRAGTFANHW 300
Query: 232 ELKPEYK 238
LKPEY+
Sbjct: 301 SLKPEYQ 307
>gi|241950553|ref|XP_002417999.1| ATP-dependent helicase, putative; transcription initiation factor
IIF, beta subunit, putative [Candida dubliniensis CD36]
gi|223641338|emb|CAX43298.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 383
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L+ + +G Y LKPEY++ D
Sbjct: 303 WSMKGLKERTRQPESYLKESLESIATLIKRGPYTSKYTLKPEYRRLRDA 351
>gi|336465225|gb|EGO53465.1| hypothetical protein NEUTE1DRAFT_92770 [Neurospora tetrasperma FGSC
2508]
gi|350295518|gb|EGZ76495.1| hypothetical protein NEUTE2DRAFT_153399 [Neurospora tetrasperma
FGSC 2509]
Length = 345
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R ++ D + K F W+++ L QPE F+++ L + V + G+ +
Sbjct: 241 KTARWPENQLLDELAKCFSVYMYWSIKALRSRIPQPEAFIRECLDKIAVIHRTGTFANHW 300
Query: 232 ELKPEYK 238
LKPEY+
Sbjct: 301 SLKPEYQ 307
>gi|164427513|ref|XP_963893.2| hypothetical protein NCU03047 [Neurospora crassa OR74A]
gi|157071774|gb|EAA34657.2| predicted protein [Neurospora crassa OR74A]
Length = 345
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R ++ D + K F W+++ L QPE F+++ L + V + G+ +
Sbjct: 241 KTARWPENQLLDELAKCFSVYMYWSIKALRSRIPQPEAFIRECLDKIAVIHRTGTFANHW 300
Query: 232 ELKPEYK 238
LKPEY+
Sbjct: 301 SLKPEYQ 307
>gi|255723710|ref|XP_002546784.1| hypothetical protein CTRG_01089 [Candida tropicalis MYA-3404]
gi|240134675|gb|EER34229.1| hypothetical protein CTRG_01089 [Candida tropicalis MYA-3404]
Length = 391
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L + +G Y LKPEY++ D
Sbjct: 311 WSMKGLKERTRQPESYLKESLDSIATLIKRGPYTSKYTLKPEYRRLRDA 359
>gi|448514436|ref|XP_003867110.1| hypothetical protein CORT_0A12890 [Candida orthopsilosis Co 90-125]
gi|380351448|emb|CCG21672.1| hypothetical protein CORT_0A12890 [Candida orthopsilosis Co 90-125]
Length = 394
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L + + KG + LKPEY++ D
Sbjct: 313 WSIKGLKERTKQPESYLKESLDSIAILIKKGPYTSKWVLKPEYRRLRDA 361
>gi|50406447|ref|XP_456634.1| DEHA2A07106p [Debaryomyces hansenii CBS767]
gi|49652298|emb|CAG84590.1| DEHA2A07106p [Debaryomyces hansenii CBS767]
Length = 403
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L + KG Y LKPEY++ D
Sbjct: 325 WSMKGLKERTRQPESYLKESLDSIANLIKKGPYTSKYNLKPEYRRLRDA 373
>gi|392572981|gb|EIW66123.1| hypothetical protein TREMEDRAFT_45844 [Tremella mesenterica DSM
1558]
Length = 335
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 154 ISTGFTEK--KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFL 211
+++GF + +P K V+ T D + + +F LF+ + W +R L +QP+ F+
Sbjct: 218 LASGFGKGLVNRPAQKDKYVRTTHSD---LTNRLFALFKDRPYWGIRALRVTLEQPDAFI 274
Query: 212 KDMLKDLCVYNNKGSNQGSYELKPEYKKA 240
+++L+++ G G Y LK +K+
Sbjct: 275 REVLEEIAEVVKDGQYAGLYTLKDVWKEG 303
>gi|164662327|ref|XP_001732285.1| hypothetical protein MGL_0060 [Malassezia globosa CBS 7966]
gi|159106188|gb|EDP45071.1| hypothetical protein MGL_0060 [Malassezia globosa CBS 7966]
Length = 393
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 191 RQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAA 241
+ +W+L++L +ET QP +L+++L + ++ G GS+ LK EY + +
Sbjct: 313 KYKHWSLKRLREETQQPYAYLREVLSSIADQHHNGPYAGSWSLKREYSEGS 363
>gi|150863704|ref|XP_001382266.2| hypothetical protein PICST_81830 [Scheffersomyces stipitis CBS
6054]
gi|149384960|gb|ABN64237.2| RNA polymerase II transcription initiation factor TFIIF middle
subunit [Scheffersomyces stipitis CBS 6054]
Length = 402
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L + KG Y LKPEY++ D
Sbjct: 323 WSMKGLKERTRQPESYLKESLDSIANLIKKGPYTSKYNLKPEYRRLRDA 371
>gi|223993441|ref|XP_002286404.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977719|gb|EED96045.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 841
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 185 MFKLFERQSNWTLRQLIQETDQ--PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+F+ F ++ W++R+L + PE+ +D+L+D+ Y+ G ++ +ELK EY+
Sbjct: 774 LFEYFSKRPLWSVRELRLASGGRLPEKETRDVLRDIAHYHRIGVHKNMWELKAEYR 829
>gi|169602625|ref|XP_001794734.1| hypothetical protein SNOG_04316 [Phaeosphaeria nodorum SN15]
gi|160706214|gb|EAT88076.2| hypothetical protein SNOG_04316 [Phaeosphaeria nodorum SN15]
Length = 329
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 163 KPQPKG--SEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCV 220
KP KG + K R R E+ D++ F+ W ++ L T QPEQFLK+ L ++
Sbjct: 219 KPPVKGKSQQNKAARVSREELIDMLHSAFDEYQYWPMKALKTRTKQPEQFLKETLAEIAQ 278
Query: 221 YNNKGSNQGSYELKPEY 237
G +++ +P +
Sbjct: 279 LVRSGPFASNWQRQPMF 295
>gi|344303297|gb|EGW33571.1| hypothetical protein SPAPADRAFT_60912 [Spathaspora passalidarum
NRRL Y-27907]
Length = 389
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L + KG Y LKPEY++ D
Sbjct: 313 WSMKGLKERTRQPESYLKESLDSIANLIKKGPYTSKYNLKPEYRRLRDA 361
>gi|397627470|gb|EJK68484.1| hypothetical protein THAOC_10324 [Thalassiosira oceanica]
Length = 335
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 181 MEDIMFKLFERQSNWTLRQLIQETDQ--PEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
+ ++F+LF ++ W+ +++ + P++ ++D L+ + Y+ G N+ +ELK E+K
Sbjct: 270 VRTMLFELFSKKQFWSAKEIKFASGGRLPDREMRDALRLIATYHKNGENRNMWELKAEFK 329
Query: 239 KAA 241
A+
Sbjct: 330 SAS 332
>gi|448119808|ref|XP_004203823.1| Piso0_000843 [Millerozyma farinosa CBS 7064]
gi|359384691|emb|CCE78226.1| Piso0_000843 [Millerozyma farinosa CBS 7064]
Length = 398
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
W+++ L + T QPE +LK+ L + KG Y LKPEY+K
Sbjct: 314 WSMKGLKERTRQPESYLKESLDSIANLIKKGPYTSKYNLKPEYRK 358
>gi|448117382|ref|XP_004203241.1| Piso0_000843 [Millerozyma farinosa CBS 7064]
gi|359384109|emb|CCE78813.1| Piso0_000843 [Millerozyma farinosa CBS 7064]
Length = 398
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKK 239
W+++ L + T QPE +LK+ L + KG Y LKPEY+K
Sbjct: 314 WSMKGLKERTRQPESYLKESLDSIANLIKKGPYTSKYNLKPEYRK 358
>gi|452847112|gb|EME49044.1| hypothetical protein DOTSEDRAFT_67924 [Dothistroma septosporum
NZE10]
Length = 366
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 172 KRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSY 231
K R E+ D + K F W++R L + QPE F+K+ L+ + G G+Y
Sbjct: 255 KAVRMTTNELIDALQKCFTEYQYWSMRSLRKHLQQPEAFIKETLEGIAFLIKSGDFVGTY 314
Query: 232 EL 233
+L
Sbjct: 315 KL 316
>gi|195380583|ref|XP_002049050.1| GJ21374 [Drosophila virilis]
gi|194143847|gb|EDW60243.1| GJ21374 [Drosophila virilis]
Length = 247
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 183 DIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYK 238
D++F+ FE+ +TL+ L T Q LK +LKD+ Y+ +++ +ELK EY+
Sbjct: 182 DMLFQAFEKHQYYTLKDLQFITKQSVFVLKAILKDIGDYSKDPAHRQMWELKEEYR 237
>gi|154308826|ref|XP_001553748.1| hypothetical protein BC1G_07941 [Botryotinia fuckeliana B05.10]
gi|347838640|emb|CCD53212.1| similar to transcription initiation factor iif [Botryotinia
fuckeliana]
Length = 364
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 171 VKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGS 230
K R E+ D +F+ F + W+++ L QPE +L++ L+ + G
Sbjct: 261 TKAARMPENELLDKIFECFREYNYWSMKALRARLQQPEAYLRETLEKIAFLAKTGRFATQ 320
Query: 231 YELKPE 236
+ LKPE
Sbjct: 321 WSLKPE 326
>gi|403350233|gb|EJY74568.1| hypothetical protein OXYTRI_04174 [Oxytricha trifallax]
Length = 275
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 150 PGM-MISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPE 208
PG I +G ++ QPK KR D+G+++ +F LF++ +TL + +QP
Sbjct: 192 PGQETILSGAAASQRQQPKE---KRFAMDQGDLKMEIFGLFQKYYQYTLEDIQNILNQPR 248
Query: 209 QFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
+K +L+++C N N YELK Y
Sbjct: 249 DPVKKVLEEICELNR---NTRFYELKRSY 274
>gi|398410784|ref|XP_003856740.1| hypothetical protein MYCGRDRAFT_31899 [Zymoseptoria tritici IPO323]
gi|339476625|gb|EGP91716.1| hypothetical protein MYCGRDRAFT_31899 [Zymoseptoria tritici IPO323]
Length = 367
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 174 TRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYEL 233
R ++ ++ D + + F+ W+L+ L QPE ++K+ L ++ G +Y+L
Sbjct: 255 VRLEKSQLLDKIQECFKDYQYWSLKALRNRLHQPEAYIKETLDEIATLVKSGDFVQNYKL 314
Query: 234 KPEY 237
KP+Y
Sbjct: 315 KPDY 318
>gi|361127293|gb|EHK99267.1| putative Transcription initiation factor IIF subunit beta [Glarea
lozoyensis 74030]
Length = 377
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 162 KKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVY 221
KKPQ + K R + E+ D +F+ F + W+++ QPE +L++ L +
Sbjct: 266 KKPQMQ----KTARMPQNELLDRIFECFREFNYWSMKAFRGRLQQPEVYLRETLDRIATL 321
Query: 222 NNKGSNQGSYELKPE 236
+ G Y LKPE
Sbjct: 322 HKSGPFASHYSLKPE 336
>gi|50306097|ref|XP_453010.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642143|emb|CAH01861.1| KLLA0C18194p [Kluyveromyces lactis]
Length = 388
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+L+ L + T QPE +LK+ L + + KG Y LK EYKK +
Sbjct: 291 WSLKGLKERTRQPEAYLKESLDQVAMLVKKGPYALKYTLKSEYKKLKEA 339
>gi|403351978|gb|EJY75492.1| hypothetical protein OXYTRI_03121 [Oxytricha trifallax]
Length = 319
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 179 GEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
+M +++ KL + RQ+ + D PE+ L+ +LK+LC Y+ N Y LKP Y
Sbjct: 263 SQMRELLLKLLRSNKKMSFRQIQRLFDNPERPLRQVLKELCDYDR---NSNLYSLKPCY 318
>gi|403337498|gb|EJY67968.1| hypothetical protein OXYTRI_11518 [Oxytricha trifallax]
Length = 319
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 179 GEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEY 237
+M +++ KL + RQ+ + D PE+ L+ +LK+LC Y+ N Y LKP Y
Sbjct: 263 SQMRELLLKLLRSNKKMSFRQIQRLFDNPEKPLRQVLKELCDYDR---NSNLYSLKPCY 318
>gi|238881836|gb|EEQ45474.1| hypothetical protein CAWG_03802 [Candida albicans WO-1]
Length = 381
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L+ + +G Y LK EY++ D
Sbjct: 302 WSMKGLKERTRQPESYLKESLESIATLIKRGPYTSKYTLKAEYRRLRDA 350
>gi|68472727|ref|XP_719682.1| hypothetical protein CaO19.9659 [Candida albicans SC5314]
gi|68472984|ref|XP_719557.1| hypothetical protein CaO19.2111 [Candida albicans SC5314]
gi|46441379|gb|EAL00677.1| hypothetical protein CaO19.2111 [Candida albicans SC5314]
gi|46441509|gb|EAL00806.1| hypothetical protein CaO19.9659 [Candida albicans SC5314]
Length = 381
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 195 WTLRQLIQETDQPEQFLKDMLKDLCVYNNKGSNQGSYELKPEYKKAADG 243
W+++ L + T QPE +LK+ L+ + +G Y LK EY++ D
Sbjct: 302 WSMKGLKERTRQPESYLKESLESIATLIKRGPYTSKYTLKAEYRRLRDA 350
>gi|331218922|ref|XP_003322138.1| hypothetical protein PGTG_03675 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301128|gb|EFP77719.1| hypothetical protein PGTG_03675 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Query: 107 MRPHHENMENYGKLCRERTNKYMTKSRQIQVIDN----DNGSHMRPMPGMMISTGFTEKK 162
+RP Y L R K+ S + VI N + ++RP+ + + G T
Sbjct: 577 IRPGETVPTLYNNLVRAPLFKHTPSSNEFLVIRNTTETETNYYIRPIDHLYV-VGQTYPV 635
Query: 163 KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLR---QLIQETDQPEQFLKDMLKDLC 219
P K T + + ++ I FKL + + +R + DQ E ++ LK+
Sbjct: 636 VEVPGPHSRKTTTQLKHRLQTIAFKLCSKSEDGRIRIGKVMKYFNDQNEMQMRQRLKEFM 695
Query: 220 VYNNKGSNQGSYELKPEYK 238
Y KG NQG + ++P K
Sbjct: 696 EYTRKGHNQGFWTIRPGLK 714
>gi|407929419|gb|EKG22249.1| Transcription initiation factor IIF beta subunit [Macrophomina
phaseolina MS6]
Length = 355
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 165 QPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDMLKDLCVYNNK 224
+PK + K R + ++ D++ KLF+ W ++ L T QPE +L++ L +
Sbjct: 244 KPKSQDNKFARIPQNQLLDMLLKLFQEYKYWPIKALKDRTRQPEAYLRETLAKVATLVRT 303
Query: 225 GSNQGSYELKPEYKKA 240
G ++ L + ++A
Sbjct: 304 GQFANTWMLNKDAEEA 319
>gi|403180347|ref|XP_003338654.2| hypothetical protein PGTG_20151, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375166318|gb|EFP94235.2| hypothetical protein PGTG_20151, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 758
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Query: 107 MRPHHENMENYGKLCRERTNKYMTKSRQIQVIDN----DNGSHMRPMPGMMISTGFTEKK 162
+RP Y L R K+ S + VI N + ++RP+ + + G T
Sbjct: 574 IRPGETVPTLYNNLVRAPLFKHTPSSNEFLVIRNTTETETNYYIRPIDHLYV-VGQTYPV 632
Query: 163 KPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLR---QLIQETDQPEQFLKDMLKDLC 219
P K T + + ++ I FKL + + +R + DQ E ++ LK+
Sbjct: 633 VEVPGPHSRKTTTQLKHRLQTIAFKLCSKSEDGRIRIGKVMKYFNDQNEMQMRQRLKEFM 692
Query: 220 VYNNKGSNQGSYELKPEYK 238
Y KG NQG + ++P K
Sbjct: 693 EYTRKGLNQGFWTIRPGLK 711
>gi|118096224|ref|XP_414050.2| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial [Gallus gallus]
Length = 878
Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 137 VIDNDNGSHMRPMPGMMISTGFTEKKKPQ-PKGS---EVKRTRRDRGEMEDIMFKLFERQ 192
V+D D ++R G ++S GF + KP +G E+ + D E ++ L R
Sbjct: 283 VVDPDGRIYIRNWQGGILSGGFEKNPKPLFTEGRNQLEIHNLQEDWDHFEPLLSSLLRRM 342
Query: 193 SNWTLRQLIQETDQPEQFLKDM 214
N Q++Q + PE F DM
Sbjct: 343 PNLEALQIMQLVNCPESFTPDM 364
>gi|405961158|gb|EKC27003.1| General transcription factor IIF subunit 2 [Crassostrea gigas]
Length = 188
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 83 PMSVFAESSNG--------KISVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQ 134
P++V ESS+G +I+VEGK+ + D +P + +Y L R++ + Q
Sbjct: 56 PVTVKQESSSGSVDVVASDRIAVEGKVIQRADCQP--DKTISYMNLKRKQLE--IKNKPQ 111
Query: 135 IQVIDNDNGSHM-RPMPGMMISTGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQS 193
+VI M +P+ + + ++K K + KR R D+ ++ DI+F FE+
Sbjct: 112 REVIQITKVVPMYKPVNNHVHNAPSSDKNKVE------KRLREDKEKVMDILFNAFEKHQ 165
Query: 194 NWTLRQLIQETDQP 207
+ ++ L+ T QP
Sbjct: 166 YYNVKDLVTLTKQP 179
>gi|326927065|ref|XP_003209715.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial-like, partial [Meleagris gallopavo]
Length = 842
Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 137 VIDNDNGSHMRPMPGMMISTGFTEKKKPQ-PKGS---EVKRTRRDRGEMEDIMFKLFERQ 192
V+D D ++R G ++S GF + KP +G E+ + D E ++ L R
Sbjct: 247 VVDPDGRIYIRNWQGGILSGGFEKNPKPLFTEGRNQLEIHNLQEDWDHFEPLLSSLLRRM 306
Query: 193 SNWTLRQLIQETDQPEQFLKDM 214
N Q++Q + PE F DM
Sbjct: 307 PNLEALQIMQLVNCPESFTPDM 328
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.127 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,811,333,220
Number of Sequences: 23463169
Number of extensions: 148841280
Number of successful extensions: 528185
Number of sequences better than 100.0: 455
Number of HSP's better than 100.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 526871
Number of HSP's gapped (non-prelim): 876
length of query: 246
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 107
effective length of database: 9,097,814,876
effective search space: 973466191732
effective search space used: 973466191732
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 75 (33.5 bits)