Query 025927
Match_columns 246
No_of_seqs 116 out of 1146
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 20:47:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3inp_A D-ribulose-phosphate 3- 100.0 7.3E-64 2.5E-68 447.2 18.9 188 56-245 26-214 (246)
2 3ctl_A D-allulose-6-phosphate 100.0 5.8E-62 2E-66 430.5 20.5 185 59-245 2-186 (231)
3 3ovp_A Ribulose-phosphate 3-ep 100.0 2.5E-59 8.7E-64 412.4 20.0 184 56-245 3-188 (228)
4 1tqx_A D-ribulose-5-phosphate 100.0 4E-59 1.4E-63 411.8 19.6 181 57-245 5-192 (227)
5 3cu2_A Ribulose-5-phosphate 3- 100.0 2.6E-57 8.7E-62 402.7 15.9 183 59-245 15-206 (237)
6 1tqj_A Ribulose-phosphate 3-ep 100.0 5.2E-52 1.8E-56 364.9 21.0 187 57-245 4-192 (230)
7 1h1y_A D-ribulose-5-phosphate 100.0 2.8E-45 9.4E-50 319.8 20.2 183 57-245 6-192 (228)
8 1rpx_A Protein (ribulose-phosp 100.0 1.6E-40 5.5E-45 288.1 21.1 196 48-245 1-198 (230)
9 2fli_A Ribulose-phosphate 3-ep 100.0 2.7E-39 9.2E-44 277.1 21.1 187 57-245 3-189 (220)
10 2czd_A Orotidine 5'-phosphate 100.0 2.5E-35 8.6E-40 253.6 -2.0 168 62-244 1-175 (208)
11 1q6o_A Humps, 3-keto-L-gulonat 100.0 1.4E-30 4.9E-35 224.8 4.6 168 61-245 4-182 (216)
12 1geq_A Tryptophan synthase alp 100.0 1.6E-28 5.6E-33 214.2 14.2 179 55-244 2-210 (248)
13 3jr2_A Hexulose-6-phosphate sy 100.0 1.4E-29 4.8E-34 219.1 6.0 171 63-245 9-185 (218)
14 1eix_A Orotidine 5'-monophosph 100.0 2.2E-30 7.6E-35 229.2 -1.1 169 61-244 15-211 (245)
15 2yyu_A Orotidine 5'-phosphate 100.0 8.4E-30 2.9E-34 225.4 1.6 163 61-238 5-188 (246)
16 1dbt_A Orotidine 5'-phosphate 99.9 2.4E-28 8.4E-33 215.0 -1.5 164 62-240 5-189 (239)
17 1qop_A Tryptophan synthase alp 99.9 3E-26 1E-30 204.7 11.0 178 56-243 15-223 (268)
18 3f4w_A Putative hexulose 6 pho 99.9 1.2E-26 4E-31 197.7 5.5 169 64-245 4-178 (211)
19 3ajx_A 3-hexulose-6-phosphate 99.9 1.7E-25 5.7E-30 190.0 7.1 166 63-245 3-177 (207)
20 1rd5_A Tryptophan synthase alp 99.9 2.5E-23 8.6E-28 184.0 14.4 180 56-245 16-221 (262)
21 3exr_A RMPD (hexulose-6-phosph 99.9 1.5E-23 5.3E-28 183.2 8.1 172 63-245 8-187 (221)
22 1vzw_A Phosphoribosyl isomeras 99.9 6.5E-22 2.2E-26 172.0 9.9 162 71-245 33-210 (244)
23 3vnd_A TSA, tryptophan synthas 99.8 3.4E-21 1.2E-25 173.4 11.2 178 56-242 16-223 (267)
24 2y88_A Phosphoribosyl isomeras 99.8 1.2E-20 3.9E-25 163.6 10.7 161 72-245 33-213 (244)
25 3m47_A Orotidine 5'-phosphate 99.7 1E-17 3.5E-22 147.0 3.3 164 63-238 15-185 (228)
26 1y0e_A Putative N-acetylmannos 99.7 1.1E-15 3.9E-20 130.7 14.5 171 57-245 6-195 (223)
27 1yad_A Regulatory protein TENI 99.7 3E-16 1E-20 134.7 10.8 159 58-245 20-183 (221)
28 1yxy_A Putative N-acetylmannos 99.6 1.2E-15 4E-20 131.9 11.2 153 71-245 37-206 (234)
29 3iwp_A Copper homeostasis prot 99.6 1.1E-14 3.6E-19 132.5 13.6 156 74-245 50-228 (287)
30 1thf_D HISF protein; thermophI 99.6 5E-15 1.7E-19 128.7 10.3 162 72-245 32-215 (253)
31 1h5y_A HISF; histidine biosynt 99.6 6.2E-15 2.1E-19 126.3 10.0 164 70-245 33-218 (253)
32 1xi3_A Thiamine phosphate pyro 99.5 2.7E-14 9.4E-19 120.6 10.5 162 58-245 18-181 (215)
33 2v82_A 2-dehydro-3-deoxy-6-pho 99.5 2.9E-14 1E-18 121.4 6.0 157 57-245 6-167 (212)
34 2tps_A Protein (thiamin phosph 99.5 1.4E-13 4.9E-18 117.5 8.8 167 57-245 20-191 (227)
35 3nl6_A Thiamine biosynthetic b 99.0 1E-09 3.6E-14 107.1 11.2 172 58-244 13-191 (540)
36 2zbt_A Pyridoxal biosynthesis 99.0 1.2E-10 4E-15 104.4 2.5 141 62-245 80-229 (297)
37 2ekc_A AQ_1548, tryptophan syn 99.0 3.8E-09 1.3E-13 93.8 12.0 178 57-244 16-225 (262)
38 3nav_A Tryptophan synthase alp 98.9 3.5E-08 1.2E-12 88.8 14.3 177 55-241 17-224 (271)
39 2gjl_A Hypothetical protein PA 98.7 2.7E-08 9.2E-13 90.3 9.3 126 106-244 58-191 (328)
40 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 2.3E-07 7.7E-12 78.1 12.5 158 57-244 9-168 (205)
41 3bo9_A Putative nitroalkan dio 98.6 2.1E-07 7.1E-12 84.9 11.5 123 106-244 68-195 (326)
42 2h6r_A Triosephosphate isomera 98.4 4.5E-07 1.6E-11 78.5 7.7 136 94-243 36-188 (219)
43 2z6i_A Trans-2-enoyl-ACP reduc 98.3 3.1E-06 1.1E-10 77.0 10.5 123 106-244 54-181 (332)
44 3ru6_A Orotidine 5'-phosphate 98.2 2.4E-07 8.1E-12 84.8 1.2 165 62-238 26-203 (303)
45 3bw2_A 2-nitropropane dioxygen 98.1 9.4E-06 3.2E-10 74.8 9.9 103 128-244 112-227 (369)
46 3o63_A Probable thiamine-phosp 98.1 4.5E-06 1.5E-10 73.7 6.9 170 58-245 33-210 (243)
47 1vc4_A Indole-3-glycerol phosp 98.0 0.00014 4.9E-09 64.2 14.4 162 70-245 65-228 (254)
48 1ujp_A Tryptophan synthase alp 98.0 5.9E-05 2E-09 67.5 11.8 177 56-243 14-220 (271)
49 1vqt_A Orotidine 5'-phosphate 98.0 4.2E-07 1.5E-11 78.7 -2.1 120 102-240 46-169 (213)
50 3tsm_A IGPS, indole-3-glycerol 97.8 0.0011 3.6E-08 59.6 16.1 169 60-245 68-240 (272)
51 3khj_A Inosine-5-monophosphate 97.7 0.00031 1E-08 65.2 11.5 153 78-243 65-225 (361)
52 3tha_A Tryptophan synthase alp 97.6 0.0015 5E-08 58.2 15.0 184 48-245 5-219 (252)
53 1ka9_F Imidazole glycerol phos 97.6 0.00031 1.1E-08 60.3 10.2 163 70-245 31-216 (252)
54 3igs_A N-acetylmannosamine-6-p 97.6 0.0023 7.7E-08 55.7 15.8 152 69-245 35-201 (232)
55 2w6r_A Imidazole glycerol phos 97.6 0.0006 2E-08 59.1 11.6 164 71-244 31-219 (266)
56 3qja_A IGPS, indole-3-glycerol 97.6 0.0011 3.9E-08 59.2 13.6 169 60-245 61-233 (272)
57 3q58_A N-acetylmannosamine-6-p 97.5 0.0024 8.2E-08 55.5 14.4 153 69-245 35-201 (229)
58 1ep3_A Dihydroorotate dehydrog 97.5 9.1E-05 3.1E-09 65.6 4.6 152 57-244 98-260 (311)
59 3tdn_A FLR symmetric alpha-bet 97.4 0.00027 9.2E-09 61.0 6.7 163 71-245 36-220 (247)
60 3tr2_A Orotidine 5'-phosphate 97.4 0.00046 1.6E-08 60.7 7.9 94 63-164 11-111 (239)
61 3ldv_A Orotidine 5'-phosphate 97.4 0.0003 1E-08 62.7 6.7 111 63-181 30-151 (255)
62 2yw3_A 4-hydroxy-2-oxoglutarat 97.2 0.0098 3.3E-07 50.7 14.3 158 58-245 13-170 (207)
63 1wbh_A KHG/KDPG aldolase; lyas 96.9 0.046 1.6E-06 46.9 15.4 159 58-245 16-175 (214)
64 4aaj_A N-(5'-phosphoribosyl)an 96.8 0.033 1.1E-06 48.5 14.1 150 70-244 29-191 (228)
65 1vhc_A Putative KHG/KDPG aldol 96.7 0.037 1.3E-06 47.9 13.8 156 59-245 18-176 (224)
66 1nsj_A PRAI, phosphoribosyl an 96.7 0.0097 3.3E-07 51.0 9.9 150 74-244 13-169 (205)
67 2e6f_A Dihydroorotate dehydrog 96.7 0.02 6.7E-07 51.0 12.2 180 56-243 15-262 (314)
68 1qo2_A Molecule: N-((5-phospho 96.6 0.0041 1.4E-07 53.3 6.8 160 72-245 32-208 (241)
69 2nv1_A Pyridoxal biosynthesis 96.5 0.0063 2.2E-07 54.4 7.9 115 74-193 32-151 (305)
70 1i4n_A Indole-3-glycerol phosp 96.4 0.15 5.2E-06 45.0 16.1 157 71-245 62-222 (251)
71 1jub_A Dihydroorotate dehydrog 96.3 0.042 1.4E-06 48.7 12.1 126 115-243 93-260 (311)
72 1v5x_A PRA isomerase, phosphor 96.2 0.13 4.4E-06 43.9 13.8 146 74-243 12-163 (203)
73 1nvm_A HOA, 4-hydroxy-2-oxoval 96.1 0.19 6.5E-06 45.8 15.5 147 67-220 27-191 (345)
74 4adt_A Pyridoxine biosynthetic 96.1 0.0056 1.9E-07 55.5 5.1 118 68-194 27-152 (297)
75 3r2g_A Inosine 5'-monophosphat 96.0 0.016 5.4E-07 54.0 7.6 105 129-243 103-217 (361)
76 4e38_A Keto-hydroxyglutarate-a 95.9 0.21 7.3E-06 43.6 14.2 156 59-245 35-193 (232)
77 1mxs_A KDPG aldolase; 2-keto-3 95.9 0.14 4.8E-06 44.2 13.0 158 59-245 27-185 (225)
78 1xm3_A Thiazole biosynthesis p 95.8 0.093 3.2E-06 46.1 11.7 158 70-245 23-198 (264)
79 3iix_A Biotin synthetase, puta 95.8 0.068 2.3E-06 47.5 10.9 151 67-222 84-262 (348)
80 1twd_A Copper homeostasis prot 95.7 0.2 6.9E-06 44.6 13.2 155 74-244 12-188 (256)
81 3w01_A Heptaprenylglyceryl pho 95.6 0.11 3.6E-06 45.8 10.9 146 74-243 27-204 (235)
82 2agk_A 1-(5-phosphoribosyl)-5- 95.6 0.099 3.4E-06 46.0 10.8 161 65-244 36-224 (260)
83 4fo4_A Inosine 5'-monophosphat 95.5 0.24 8.2E-06 45.9 13.5 148 79-244 67-230 (366)
84 3p6l_A Sugar phosphate isomera 95.1 0.25 8.5E-06 41.7 11.5 128 55-186 7-153 (262)
85 3b0p_A TRNA-dihydrouridine syn 94.9 0.18 6.1E-06 46.1 10.6 139 55-193 55-224 (350)
86 3t7v_A Methylornithine synthas 94.8 0.18 6.3E-06 45.1 10.4 151 67-222 91-271 (350)
87 2zbt_A Pyridoxal biosynthesis 94.8 0.047 1.6E-06 48.2 6.3 117 73-194 31-152 (297)
88 3lmz_A Putative sugar isomeras 94.5 0.33 1.1E-05 41.0 10.8 110 57-173 17-134 (257)
89 3ffs_A Inosine-5-monophosphate 94.4 0.4 1.4E-05 45.1 12.0 112 128-244 146-265 (400)
90 3ceu_A Thiamine phosphate pyro 94.4 0.37 1.3E-05 40.4 10.7 155 58-245 4-163 (210)
91 1ydn_A Hydroxymethylglutaryl-C 94.3 0.34 1.2E-05 42.8 10.8 147 67-220 23-197 (295)
92 2qgq_A Protein TM_1862; alpha- 94.1 1.9 6.5E-05 38.0 15.3 129 67-198 33-195 (304)
93 4avf_A Inosine-5'-monophosphat 94.1 0.29 9.9E-06 46.8 10.5 166 71-243 167-350 (490)
94 1jcn_A Inosine monophosphate d 93.9 0.39 1.3E-05 45.7 11.1 107 128-243 257-376 (514)
95 2bdq_A Copper homeostasis prot 93.9 0.21 7.2E-06 43.7 8.3 152 78-244 16-196 (224)
96 1pii_A N-(5'phosphoribosyl)ant 93.8 1.3 4.4E-05 42.3 14.3 166 60-244 57-227 (452)
97 1eep_A Inosine 5'-monophosphat 93.8 0.34 1.2E-05 44.8 10.1 119 118-243 144-274 (404)
98 1pii_A N-(5'phosphoribosyl)ant 93.8 0.52 1.8E-05 45.0 11.5 146 74-244 266-417 (452)
99 4ef8_A Dihydroorotate dehydrog 93.7 0.53 1.8E-05 43.4 11.1 178 56-241 48-293 (354)
100 2ftp_A Hydroxymethylglutaryl-C 93.6 0.76 2.6E-05 40.9 11.7 162 67-242 27-223 (302)
101 2f6u_A GGGPS, (S)-3-O-geranylg 93.6 0.5 1.7E-05 41.3 10.2 145 74-243 24-208 (234)
102 2b7n_A Probable nicotinate-nuc 93.5 0.17 6E-06 44.9 7.4 84 145-245 161-248 (273)
103 4gj1_A 1-(5-phosphoribosyl)-5- 93.4 1.2 4.1E-05 38.5 12.4 168 63-244 27-215 (243)
104 1f76_A Dihydroorotate dehydrog 93.4 0.65 2.2E-05 41.5 11.0 134 106-242 123-306 (336)
105 1me8_A Inosine-5'-monophosphat 93.4 0.36 1.2E-05 46.1 9.8 110 125-238 241-364 (503)
106 1vrd_A Inosine-5'-monophosphat 93.3 0.33 1.1E-05 45.9 9.3 168 70-243 174-358 (494)
107 1viz_A PCRB protein homolog; s 93.3 0.69 2.3E-05 40.5 10.6 146 74-244 24-201 (240)
108 2uva_G Fatty acid synthase bet 93.2 0.85 2.9E-05 50.9 13.5 123 105-237 625-766 (2060)
109 2q02_A Putative cytoplasmic pr 93.2 0.75 2.6E-05 38.5 10.5 133 57-189 6-162 (272)
110 3o1n_A 3-dehydroquinate dehydr 93.0 0.71 2.4E-05 41.1 10.5 132 52-186 34-183 (276)
111 1dxe_A 2-dehydro-3-deoxy-galac 92.9 0.4 1.4E-05 41.8 8.6 147 73-228 30-214 (256)
112 3lab_A Putative KDPG (2-keto-3 92.7 2.6 9.1E-05 36.4 13.3 162 56-245 11-178 (217)
113 3noy_A 4-hydroxy-3-methylbut-2 92.4 0.86 2.9E-05 42.5 10.5 98 67-175 43-143 (366)
114 2yr1_A 3-dehydroquinate dehydr 92.3 1.5 5E-05 38.5 11.4 131 52-186 14-163 (257)
115 3b0p_A TRNA-dihydrouridine syn 92.2 0.62 2.1E-05 42.4 9.3 127 114-244 56-216 (350)
116 3gk0_A PNP synthase, pyridoxin 92.1 3.7 0.00013 36.9 13.8 161 74-246 57-234 (278)
117 3usb_A Inosine-5'-monophosphat 92.0 2.4 8.3E-05 40.6 13.5 167 70-242 193-376 (511)
118 2v5j_A 2,4-dihydroxyhept-2-ENE 91.8 0.73 2.5E-05 41.1 9.0 145 74-227 51-234 (287)
119 2vws_A YFAU, 2-keto-3-deoxy su 91.5 0.66 2.2E-05 40.7 8.3 145 74-227 30-213 (267)
120 2jbm_A Nicotinate-nucleotide p 91.3 0.39 1.3E-05 43.3 6.8 77 154-245 183-263 (299)
121 3qz6_A HPCH/HPAI aldolase; str 91.1 0.92 3.2E-05 39.8 8.8 144 76-229 30-213 (261)
122 3eyp_A Putative alpha-L-fucosi 91.0 0.6 2E-05 44.6 8.1 91 126-234 55-168 (469)
123 3c8f_A Pyruvate formate-lyase 90.9 4.5 0.00015 33.0 12.5 154 70-227 53-243 (245)
124 3gr7_A NADPH dehydrogenase; fl 90.8 0.96 3.3E-05 41.1 8.9 122 71-193 145-306 (340)
125 3ues_A Alpha-1,3/4-fucosidase; 90.5 1.2 4.1E-05 42.7 9.7 89 126-235 63-175 (478)
126 1jvn_A Glutamine, bifunctional 90.3 0.95 3.3E-05 43.9 8.9 164 71-244 281-515 (555)
127 1jub_A Dihydroorotate dehydrog 90.2 1.3 4.6E-05 38.9 9.2 161 57-226 93-299 (311)
128 2qr6_A IMP dehydrogenase/GMP r 90.1 2.2 7.5E-05 39.1 10.7 130 106-241 147-293 (393)
129 1yx1_A Hypothetical protein PA 90.0 1.1 3.7E-05 37.9 8.1 126 71-200 24-166 (264)
130 1o4u_A Type II quinolic acid p 89.9 1.5 5.3E-05 39.2 9.3 77 154-245 179-259 (285)
131 2wvv_A Alpha-L-fucosidase; alp 89.8 1 3.5E-05 42.6 8.5 97 126-237 79-200 (450)
132 3oix_A Putative dihydroorotate 89.6 1.3 4.5E-05 40.6 8.8 122 113-237 126-286 (345)
133 1olt_A Oxygen-independent copr 89.6 3.5 0.00012 38.5 11.9 157 69-232 86-288 (457)
134 3vzx_A Heptaprenylglyceryl pho 89.6 1.5 5.2E-05 38.1 8.7 146 74-243 22-198 (228)
135 3kws_A Putative sugar isomeras 89.3 5.3 0.00018 33.8 12.0 142 42-189 9-189 (287)
136 3cny_A Inositol catabolism pro 89.2 1.4 4.8E-05 37.4 8.2 112 70-189 31-181 (301)
137 3ppg_A 5-methyltetrahydroptero 89.1 0.57 1.9E-05 47.8 6.5 142 71-219 617-781 (789)
138 1qpo_A Quinolinate acid phosph 89.1 1.7 5.7E-05 38.9 8.9 78 153-245 180-260 (284)
139 2yci_X 5-methyltetrahydrofolat 89.1 2.5 8.6E-05 37.4 10.0 99 66-172 30-132 (271)
140 2cw6_A Hydroxymethylglutaryl-C 88.9 4.5 0.00015 35.7 11.6 140 69-220 26-198 (298)
141 1tv8_A MOAA, molybdenum cofact 88.8 12 0.0004 32.9 16.7 115 67-186 50-182 (340)
142 2ftp_A Hydroxymethylglutaryl-C 88.7 1.3 4.6E-05 39.3 7.9 78 67-146 156-236 (302)
143 1r30_A Biotin synthase; SAM ra 88.3 8.1 0.00028 34.6 13.0 150 67-223 99-280 (369)
144 1vhn_A Putative flavin oxidore 88.2 0.61 2.1E-05 41.7 5.4 132 57-193 58-212 (318)
145 2e6f_A Dihydroorotate dehydrog 88.1 0.37 1.3E-05 42.6 3.9 161 57-226 93-301 (314)
146 3aam_A Endonuclease IV, endoiv 88.1 4.7 0.00016 33.8 10.7 139 59-199 3-171 (270)
147 1uas_A Alpha-galactosidase; TI 88.0 2 6.9E-05 39.0 8.8 71 67-176 23-98 (362)
148 1sfl_A 3-dehydroquinate dehydr 88.0 4 0.00014 35.2 10.3 127 57-186 3-149 (238)
149 2zxd_A Alpha-L-fucosidase, put 87.9 1.2 4.1E-05 42.4 7.5 98 126-235 106-227 (455)
150 3rpd_A Methionine synthase (B1 87.7 0.51 1.7E-05 43.4 4.7 135 71-219 172-345 (357)
151 1wa3_A 2-keto-3-deoxy-6-phosph 87.5 1.9 6.6E-05 35.3 7.7 65 128-201 25-93 (205)
152 1p0k_A Isopentenyl-diphosphate 87.3 12 0.00041 33.4 13.5 124 114-242 115-268 (349)
153 3gr7_A NADPH dehydrogenase; fl 87.3 1.8 6.1E-05 39.3 8.0 87 57-146 213-308 (340)
154 2q02_A Putative cytoplasmic pr 87.2 9.1 0.00031 31.7 11.9 104 126-232 20-141 (272)
155 3ayv_A Putative uncharacterize 87.2 1 3.5E-05 37.6 5.9 124 67-199 7-164 (254)
156 1f6y_A 5-methyltetrahydrofolat 87.0 2.2 7.4E-05 37.6 8.1 93 67-171 22-122 (262)
157 1gte_A Dihydropyrimidine dehyd 86.9 2.6 9E-05 43.4 10.0 131 108-242 626-804 (1025)
158 3vzx_A Heptaprenylglyceryl pho 86.6 0.83 2.8E-05 39.8 5.1 74 120-199 8-87 (228)
159 3hgj_A Chromate reductase; TIM 86.3 6 0.0002 35.8 11.0 121 72-193 154-317 (349)
160 1ydo_A HMG-COA lyase; TIM-barr 86.3 15 0.00053 32.6 13.6 142 68-220 26-199 (307)
161 1m5w_A Pyridoxal phosphate bio 86.2 4.1 0.00014 35.9 9.4 161 75-246 30-206 (243)
162 3o6c_A PNP synthase, pyridoxin 86.1 3 0.0001 37.2 8.5 158 74-245 29-225 (260)
163 1z41_A YQJM, probable NADH-dep 86.1 6.2 0.00021 35.4 10.9 122 71-193 145-306 (338)
164 3aal_A Probable endonuclease 4 86.0 6.9 0.00024 33.6 10.8 141 59-199 7-185 (303)
165 3f4w_A Putative hexulose 6 pho 85.8 1.6 5.5E-05 35.9 6.4 137 74-222 68-209 (211)
166 2xn2_A Alpha-galactosidase; hy 85.5 3.5 0.00012 41.3 9.7 128 66-235 346-485 (732)
167 2w6r_A Imidazole glycerol phos 85.5 4.1 0.00014 34.6 9.0 138 74-226 87-252 (266)
168 1hg3_A Triosephosphate isomera 85.3 3.6 0.00012 35.5 8.5 127 104-243 48-193 (225)
169 1qtw_A Endonuclease IV; DNA re 85.3 9 0.00031 32.0 11.0 139 59-199 3-181 (285)
170 3w01_A Heptaprenylglyceryl pho 85.2 1.2 4.2E-05 38.9 5.6 80 120-206 13-98 (235)
171 1i60_A IOLI protein; beta barr 85.0 7.7 0.00026 32.1 10.3 107 126-235 15-147 (278)
172 1i60_A IOLI protein; beta barr 85.0 7.6 0.00026 32.1 10.3 129 60-189 3-165 (278)
173 4h3d_A 3-dehydroquinate dehydr 84.9 9.8 0.00034 33.2 11.3 127 53-185 15-162 (258)
174 1vyr_A Pentaerythritol tetrani 84.5 3.2 0.00011 38.0 8.3 122 71-193 162-322 (364)
175 1ypf_A GMP reductase; GUAC, pu 84.3 9.7 0.00033 34.1 11.3 114 74-193 109-238 (336)
176 4a29_A Engineered retro-aldol 84.3 3.2 0.00011 36.9 7.8 149 79-243 72-222 (258)
177 3qc0_A Sugar isomerase; TIM ba 84.1 2.9 0.0001 34.8 7.3 139 56-199 3-179 (275)
178 3noy_A 4-hydroxy-3-methylbut-2 84.1 4.9 0.00017 37.5 9.3 107 115-234 29-143 (366)
179 4fnq_A Alpha-galactosidase AGA 84.1 3.6 0.00012 41.1 9.1 128 66-235 342-481 (729)
180 3tva_A Xylose isomerase domain 83.8 1.9 6.4E-05 36.6 6.1 124 70-199 21-186 (290)
181 2gou_A Oxidoreductase, FMN-bin 83.8 2.9 9.9E-05 38.3 7.7 122 71-193 162-321 (365)
182 3qvq_A Phosphodiesterase OLEI0 83.5 4.7 0.00016 34.5 8.5 85 100-191 149-235 (252)
183 4fxs_A Inosine-5'-monophosphat 83.4 8 0.00027 36.8 10.8 112 127-243 232-352 (496)
184 2c6q_A GMP reductase 2; TIM ba 83.4 9.5 0.00032 34.7 10.9 104 129-237 121-234 (351)
185 3dxi_A Putative aldolase; TIM 83.2 5.5 0.00019 36.0 9.2 105 69-177 23-139 (320)
186 1z41_A YQJM, probable NADH-dep 83.2 1.8 6E-05 39.1 5.9 85 58-145 214-307 (338)
187 3lot_A Uncharacterized protein 83.2 6.3 0.00022 35.8 9.5 142 67-213 29-219 (314)
188 4fxs_A Inosine-5'-monophosphat 83.1 4.3 0.00015 38.7 8.8 67 72-144 232-299 (496)
189 3apt_A Methylenetetrahydrofola 83.1 6.2 0.00021 35.4 9.4 147 69-228 28-203 (310)
190 3ble_A Citramalate synthase fr 82.9 7.8 0.00027 35.0 10.1 141 70-220 41-211 (337)
191 3no5_A Uncharacterized protein 82.7 12 0.0004 33.3 10.9 143 67-213 27-189 (275)
192 1ydn_A Hydroxymethylglutaryl-C 82.5 2.4 8.3E-05 37.2 6.4 77 67-145 152-231 (295)
193 3inp_A D-ribulose-phosphate 3- 82.5 13 0.00045 32.3 11.0 124 59-193 88-222 (246)
194 2r14_A Morphinone reductase; H 82.4 2 6.7E-05 39.7 6.0 122 71-193 167-327 (377)
195 3chv_A Prokaryotic domain of u 82.2 11 0.00038 33.7 10.7 144 66-213 30-193 (284)
196 1kbi_A Cytochrome B2, L-LCR; f 82.1 16 0.00054 35.1 12.4 130 62-193 251-431 (511)
197 1vyr_A Pentaerythritol tetrani 81.8 2.6 9E-05 38.5 6.5 72 71-146 252-324 (364)
198 1vzw_A Phosphoribosyl isomeras 81.7 4.5 0.00015 34.0 7.6 114 74-195 88-223 (244)
199 2v82_A 2-dehydro-3-deoxy-6-pho 81.5 14 0.00047 30.2 10.4 129 74-221 71-201 (212)
200 1w0m_A TIM, triosephosphate is 81.5 4 0.00014 35.3 7.3 132 95-243 40-190 (226)
201 3e49_A Uncharacterized protein 81.5 8.8 0.0003 34.7 9.8 143 67-214 29-218 (311)
202 1q7z_A 5-methyltetrahydrofolat 81.4 7.4 0.00025 37.9 9.9 99 65-170 335-436 (566)
203 1tqj_A Ribulose-phosphate 3-ep 80.4 5.4 0.00018 33.9 7.7 128 59-195 64-202 (230)
204 3lot_A Uncharacterized protein 80.3 2.2 7.4E-05 38.8 5.4 99 127-231 31-175 (314)
205 2otd_A Glycerophosphodiester p 80.3 7.1 0.00024 33.0 8.4 92 100-200 146-239 (247)
206 3hgj_A Chromate reductase; TIM 79.7 3.2 0.00011 37.6 6.3 86 58-146 224-319 (349)
207 1tx2_A DHPS, dihydropteroate s 79.2 4.1 0.00014 36.7 6.7 150 67-228 60-234 (297)
208 3e02_A Uncharacterized protein 79.1 11 0.00037 34.1 9.6 142 67-213 29-217 (311)
209 1u1j_A 5-methyltetrahydroptero 79.0 15 0.0005 37.0 11.4 72 71-146 187-268 (765)
210 3c8f_A Pyruvate formate-lyase 78.9 11 0.00037 30.6 8.9 99 139-243 70-183 (245)
211 3e49_A Uncharacterized protein 78.9 2.6 9E-05 38.2 5.4 99 127-231 31-173 (311)
212 3tqv_A Nicotinate-nucleotide p 78.8 4.6 0.00016 36.3 6.9 75 153-245 184-261 (287)
213 3l12_A Putative glycerophospho 78.7 6.2 0.00021 34.8 7.8 72 78-167 240-311 (313)
214 1h1y_A D-ribulose-5-phosphate 78.7 21 0.00073 29.7 10.9 127 59-196 66-203 (228)
215 4avf_A Inosine-5'-monophosphat 78.1 14 0.00048 35.0 10.5 80 57-144 217-297 (490)
216 3khj_A Inosine-5-monophosphate 77.9 2.7 9.3E-05 38.6 5.3 68 73-146 107-174 (361)
217 1ps9_A 2,4-dienoyl-COA reducta 77.8 7 0.00024 38.0 8.5 86 58-146 213-311 (671)
218 2x7v_A Probable endonuclease 4 77.8 23 0.0008 29.4 10.8 129 71-199 13-180 (287)
219 2nli_A Lactate oxidase; flavoe 77.6 4.9 0.00017 36.8 7.0 125 67-193 143-312 (368)
220 3eb2_A Putative dihydrodipicol 77.6 16 0.00056 32.2 10.2 126 66-214 21-155 (300)
221 3tr9_A Dihydropteroate synthas 77.5 9.9 0.00034 34.5 8.8 147 67-227 46-231 (314)
222 2qul_A D-tagatose 3-epimerase; 77.3 19 0.00066 29.9 10.2 107 126-233 18-155 (290)
223 1jcn_A Inosine monophosphate d 77.2 2.8 9.5E-05 39.8 5.3 68 71-144 255-323 (514)
224 3e02_A Uncharacterized protein 77.2 2.5 8.6E-05 38.3 4.8 99 127-231 31-173 (311)
225 1k77_A EC1530, hypothetical pr 77.1 13 0.00043 30.7 8.9 70 70-146 15-106 (260)
226 3dx5_A Uncharacterized protein 77.0 3.4 0.00012 34.8 5.3 138 59-199 2-174 (286)
227 3l5l_A Xenobiotic reductase A; 76.9 3.2 0.00011 37.9 5.5 85 58-145 230-325 (363)
228 3zwt_A Dihydroorotate dehydrog 76.4 20 0.0007 32.8 10.8 119 115-236 146-308 (367)
229 2y88_A Phosphoribosyl isomeras 76.3 7.7 0.00026 32.3 7.4 113 74-195 87-226 (244)
230 2gou_A Oxidoreductase, FMN-bin 76.1 4.1 0.00014 37.3 5.9 71 71-145 251-322 (365)
231 3chv_A Prokaryotic domain of u 76.1 3.5 0.00012 37.0 5.3 99 127-231 33-149 (284)
232 1yxy_A Putative N-acetylmannos 76.0 28 0.00097 28.7 10.8 116 73-195 91-216 (234)
233 1f76_A Dihydroorotate dehydrog 75.8 2.8 9.4E-05 37.4 4.6 85 57-146 133-246 (336)
234 3a5v_A Alpha-galactosidase; be 75.3 50 0.0017 30.3 14.9 123 67-230 23-164 (397)
235 1zy9_A Alpha-galactosidase; TM 75.2 6.2 0.00021 38.4 7.2 64 68-175 210-273 (564)
236 3no5_A Uncharacterized protein 74.9 2.9 9.8E-05 37.3 4.4 102 127-234 29-149 (275)
237 1ypx_A Putative vitamin-B12 in 74.8 4.9 0.00017 36.9 6.1 149 71-221 168-362 (375)
238 2cw6_A Hydroxymethylglutaryl-C 74.8 5.4 0.00019 35.1 6.2 76 67-144 153-231 (298)
239 3iwp_A Copper homeostasis prot 74.7 17 0.00057 32.7 9.4 122 68-193 109-237 (287)
240 3l23_A Sugar phosphate isomera 74.1 8.2 0.00028 33.4 7.2 112 58-172 13-164 (303)
241 2o7s_A DHQ-SDH PR, bifunctiona 74.0 8.5 0.00029 36.6 7.8 85 56-146 3-100 (523)
242 3l0g_A Nicotinate-nucleotide p 73.9 7.2 0.00025 35.3 6.9 77 153-245 193-270 (300)
243 3eoo_A Methylisocitrate lyase; 73.9 2.6 8.9E-05 38.0 3.9 105 72-186 170-281 (298)
244 2yfo_A Alpha-galactosidase-suc 73.8 5.7 0.00019 39.8 6.7 74 66-175 342-415 (720)
245 1vhn_A Putative flavin oxidore 73.7 9.6 0.00033 33.7 7.6 83 58-147 131-215 (318)
246 1ep3_A Dihydroorotate dehydrog 73.6 12 0.0004 32.4 8.0 87 109-195 91-197 (311)
247 3cqj_A L-ribulose-5-phosphate 73.5 13 0.00045 31.4 8.2 105 126-234 31-170 (295)
248 1ypf_A GMP reductase; GUAC, pu 73.5 46 0.0016 29.6 12.2 121 105-237 85-221 (336)
249 2bdq_A Copper homeostasis prot 73.3 23 0.00077 30.7 9.6 116 67-186 73-197 (224)
250 1xg4_A Probable methylisocitra 73.0 4.4 0.00015 36.3 5.2 109 68-186 165-277 (295)
251 3l5l_A Xenobiotic reductase A; 72.9 8.1 0.00028 35.1 7.1 121 72-193 160-324 (363)
252 3ctl_A D-allulose-6-phosphate 72.5 18 0.0006 31.0 8.8 125 59-193 59-194 (231)
253 3u0h_A Xylose isomerase domain 72.5 12 0.00043 30.9 7.7 131 58-189 4-170 (281)
254 2hk0_A D-psicose 3-epimerase; 72.2 12 0.00039 32.1 7.6 126 58-189 21-194 (309)
255 3c6c_A 3-keto-5-aminohexanoate 72.1 18 0.00063 32.8 9.2 144 67-213 45-231 (316)
256 1gte_A Dihydropyrimidine dehyd 72.0 41 0.0014 34.6 12.8 132 58-193 635-815 (1025)
257 3dz1_A Dihydrodipicolinate syn 71.9 38 0.0013 30.0 11.1 126 66-214 25-159 (313)
258 1rpx_A Protein (ribulose-phosp 71.9 19 0.00066 29.8 8.8 116 72-195 80-208 (230)
259 3l21_A DHDPS, dihydrodipicolin 71.8 38 0.0013 29.9 11.1 126 66-214 32-166 (304)
260 3cqj_A L-ribulose-5-phosphate 71.7 22 0.00075 30.0 9.2 132 58-189 17-187 (295)
261 2yw3_A 4-hydroxy-2-oxoglutarat 71.6 43 0.0015 27.8 12.1 106 74-196 74-181 (207)
262 1thf_D HISF protein; thermophI 71.6 18 0.00062 30.2 8.6 92 71-167 152-247 (253)
263 1eye_A DHPS 1, dihydropteroate 71.3 22 0.00075 31.5 9.3 147 67-226 26-205 (280)
264 3qze_A DHDPS, dihydrodipicolin 71.3 26 0.00088 31.2 9.9 126 66-214 40-174 (314)
265 3tak_A DHDPS, dihydrodipicolin 71.2 29 0.00099 30.4 10.1 126 66-214 18-152 (291)
266 2h9a_A Carbon monoxide dehydro 71.0 19 0.00066 34.1 9.4 144 56-220 90-251 (445)
267 1tv5_A Dhodehase, dihydroorota 70.9 26 0.0009 33.0 10.3 120 115-237 179-384 (443)
268 3m5v_A DHDPS, dihydrodipicolin 70.8 39 0.0013 29.7 10.9 127 66-215 24-160 (301)
269 1wbh_A KHG/KDPG aldolase; lyas 70.6 35 0.0012 28.6 10.2 101 74-192 79-183 (214)
270 1ea0_A Glutamate synthase [NAD 70.5 32 0.0011 37.4 11.8 100 137-237 961-1075(1479)
271 2nx9_A Oxaloacetate decarboxyl 70.1 18 0.00063 34.3 9.1 140 76-220 36-200 (464)
272 3cyv_A URO-D, UPD, uroporphyri 70.1 32 0.0011 30.5 10.2 74 74-158 191-279 (354)
273 2nuw_A 2-keto-3-deoxygluconate 70.0 23 0.00078 31.0 9.2 124 66-213 16-147 (288)
274 2y7e_A 3-keto-5-aminohexanoate 69.9 20 0.0007 31.9 8.8 144 66-213 30-195 (282)
275 3vni_A Xylose isomerase domain 69.8 15 0.0005 30.9 7.6 128 57-189 3-175 (294)
276 1zlp_A PSR132, petal death pro 69.8 8.7 0.0003 34.9 6.4 106 70-186 189-299 (318)
277 3ih1_A Methylisocitrate lyase; 69.7 7.6 0.00026 35.1 6.0 107 69-186 174-285 (305)
278 1t7l_A 5-methyltetrahydroptero 69.7 26 0.00088 35.6 10.4 139 71-219 590-756 (766)
279 3c2e_A Nicotinate-nucleotide p 69.6 6.7 0.00023 35.0 5.6 77 154-245 185-268 (294)
280 1vhc_A Putative KHG/KDPG aldol 69.5 31 0.001 29.3 9.6 101 74-192 80-184 (224)
281 1w3i_A EDA, 2-keto-3-deoxy glu 69.5 39 0.0013 29.6 10.6 123 66-212 16-146 (293)
282 3kws_A Putative sugar isomeras 69.3 24 0.00083 29.6 8.9 102 127-232 40-167 (287)
283 3bg3_A Pyruvate carboxylase, m 69.2 96 0.0033 31.1 14.4 151 67-221 122-304 (718)
284 2o55_A Putative glycerophospho 69.2 22 0.00077 30.0 8.7 87 100-192 147-242 (258)
285 3aty_A Tcoye, prostaglandin F2 69.2 8.1 0.00028 35.6 6.2 93 70-176 266-359 (379)
286 2g0w_A LMO2234 protein; putati 68.9 11 0.00036 32.3 6.6 35 57-91 22-57 (296)
287 3aam_A Endonuclease IV, endoiv 68.8 9.6 0.00033 31.8 6.2 102 128-232 17-141 (270)
288 3ks6_A Glycerophosphoryl diest 68.8 20 0.00068 30.4 8.3 71 74-162 172-242 (250)
289 4fo4_A Inosine 5'-monophosphat 68.3 5 0.00017 37.0 4.6 68 72-145 109-177 (366)
290 2r91_A 2-keto-3-deoxy-(6-phosp 68.3 43 0.0015 29.2 10.6 123 66-212 15-145 (286)
291 2pz0_A Glycerophosphoryl diest 68.0 13 0.00044 31.6 6.9 85 100-191 150-236 (252)
292 3si9_A DHDPS, dihydrodipicolin 67.9 52 0.0018 29.3 11.2 126 66-214 39-173 (315)
293 3ngf_A AP endonuclease, family 67.9 18 0.00061 30.2 7.7 40 128-169 26-65 (269)
294 3i65_A Dihydroorotate dehydrog 67.9 15 0.00051 34.5 7.8 119 116-237 182-356 (415)
295 3l23_A Sugar phosphate isomera 67.7 16 0.00056 31.5 7.6 104 126-230 30-165 (303)
296 2nzl_A Hydroxyacid oxidase 1; 67.6 20 0.00068 33.1 8.6 124 67-193 157-335 (392)
297 3ffs_A Inosine-5-monophosphate 67.5 15 0.00052 34.2 7.8 125 58-193 135-274 (400)
298 3na8_A Putative dihydrodipicol 67.5 32 0.0011 30.6 9.7 125 66-213 41-174 (315)
299 3b8i_A PA4872 oxaloacetate dec 67.4 7.2 0.00025 34.9 5.3 102 68-185 166-270 (287)
300 1h5y_A HISF; histidine biosynt 67.4 17 0.00057 29.8 7.3 95 71-167 155-250 (253)
301 2pz0_A Glycerophosphoryl diest 67.4 7.7 0.00026 33.0 5.3 71 77-165 182-252 (252)
302 3daq_A DHDPS, dihydrodipicolin 67.2 32 0.0011 30.1 9.5 126 66-214 19-153 (292)
303 2qjg_A Putative aldolase MJ040 67.1 57 0.0019 27.5 15.2 144 67-239 42-215 (273)
304 1twi_A Diaminopimelate decarbo 66.9 41 0.0014 30.6 10.5 151 57-228 61-243 (434)
305 2qul_A D-tagatose 3-epimerase; 66.9 11 0.00036 31.6 6.1 48 70-122 17-67 (290)
306 3ovp_A Ribulose-phosphate 3-ep 66.7 35 0.0012 28.9 9.4 66 129-195 21-95 (228)
307 3fst_A 5,10-methylenetetrahydr 66.6 36 0.0012 30.4 9.8 148 70-227 39-205 (304)
308 3lmz_A Putative sugar isomeras 66.4 14 0.00048 30.7 6.8 42 127-168 32-77 (257)
309 2v9d_A YAGE; dihydrodipicolini 66.2 43 0.0015 30.2 10.4 127 65-214 47-182 (343)
310 3can_A Pyruvate-formate lyase- 66.2 24 0.0008 27.9 7.8 83 155-243 22-115 (182)
311 4af0_A Inosine-5'-monophosphat 66.2 33 0.0011 33.6 10.0 101 129-237 284-395 (556)
312 1xky_A Dihydrodipicolinate syn 66.0 46 0.0016 29.3 10.4 126 66-214 29-163 (301)
313 3lye_A Oxaloacetate acetyl hyd 65.9 22 0.00074 32.1 8.2 104 72-187 177-288 (307)
314 3sr7_A Isopentenyl-diphosphate 65.9 28 0.00096 31.9 9.1 81 114-194 143-237 (365)
315 3qxb_A Putative xylose isomera 65.8 28 0.00096 29.8 8.7 131 53-188 17-200 (316)
316 3qvq_A Phosphodiesterase OLEI0 65.8 21 0.00072 30.3 7.8 69 77-163 181-249 (252)
317 3vni_A Xylose isomerase domain 65.8 37 0.0013 28.4 9.3 106 126-232 18-153 (294)
318 3igs_A N-acetylmannosamine-6-p 65.7 52 0.0018 27.9 10.3 113 73-194 91-210 (232)
319 2qiw_A PEP phosphonomutase; st 65.7 16 0.00053 32.0 7.1 85 69-165 167-254 (255)
320 3ih1_A Methylisocitrate lyase; 65.7 15 0.00052 33.1 7.1 76 67-146 101-196 (305)
321 3qc0_A Sugar isomerase; TIM ba 65.6 15 0.00051 30.4 6.7 112 117-231 6-143 (275)
322 2yxg_A DHDPS, dihydrodipicolin 65.3 69 0.0024 27.9 11.8 126 66-214 17-151 (289)
323 4g9p_A 4-hydroxy-3-methylbut-2 65.3 81 0.0028 29.7 12.2 112 115-234 21-147 (406)
324 1ofd_A Ferredoxin-dependent gl 65.3 42 0.0014 36.7 11.4 100 137-237 996-1110(1520)
325 1s2w_A Phosphoenolpyruvate pho 65.3 6.7 0.00023 35.1 4.7 111 68-184 92-230 (295)
326 3tva_A Xylose isomerase domain 65.2 43 0.0015 28.0 9.6 114 116-232 11-160 (290)
327 2zvr_A Uncharacterized protein 65.1 25 0.00085 29.6 8.1 22 71-92 42-63 (290)
328 1icp_A OPR1, 12-oxophytodienoa 64.9 7.6 0.00026 35.6 5.1 122 71-193 168-329 (376)
329 1izc_A Macrophomate synthase i 64.9 19 0.00064 32.8 7.7 145 74-226 54-249 (339)
330 4ef8_A Dihydroorotate dehydrog 64.8 44 0.0015 30.4 10.2 161 57-226 126-334 (354)
331 3p6l_A Sugar phosphate isomera 64.8 30 0.001 28.6 8.5 33 154-186 65-98 (262)
332 3q58_A N-acetylmannosamine-6-p 64.7 50 0.0017 28.0 10.0 113 73-194 91-210 (229)
333 3b4u_A Dihydrodipicolinate syn 64.4 70 0.0024 27.9 11.2 126 66-214 20-158 (294)
334 2rfg_A Dihydrodipicolinate syn 64.4 29 0.00099 30.6 8.7 126 66-214 17-151 (297)
335 3vkj_A Isopentenyl-diphosphate 64.3 6 0.0002 36.4 4.3 74 68-144 136-217 (368)
336 3fij_A LIN1909 protein; 11172J 64.1 14 0.00046 31.6 6.3 39 156-196 32-70 (254)
337 2ehh_A DHDPS, dihydrodipicolin 64.1 74 0.0025 27.7 11.6 126 66-214 17-151 (294)
338 1icp_A OPR1, 12-oxophytodienoa 63.9 5 0.00017 36.9 3.6 73 71-147 257-332 (376)
339 2r14_A Morphinone reductase; H 63.8 7.2 0.00024 35.9 4.7 87 70-163 255-343 (377)
340 2wkj_A N-acetylneuraminate lya 63.4 78 0.0027 27.8 11.7 126 66-214 28-163 (303)
341 3obe_A Sugar phosphate isomera 63.3 33 0.0011 29.6 8.8 115 115-231 20-170 (305)
342 1ps9_A 2,4-dienoyl-COA reducta 63.3 14 0.00048 35.8 6.9 122 71-193 142-309 (671)
343 3fst_A 5,10-methylenetetrahydr 63.3 26 0.0009 31.3 8.2 123 60-184 85-223 (304)
344 3cu2_A Ribulose-5-phosphate 3- 62.8 28 0.00097 29.9 8.1 114 73-195 82-218 (237)
345 2ojp_A DHDPS, dihydrodipicolin 62.8 31 0.0011 30.2 8.5 126 66-214 18-152 (292)
346 2zds_A Putative DNA-binding pr 62.6 21 0.00072 30.6 7.3 139 60-199 5-212 (340)
347 3flu_A DHDPS, dihydrodipicolin 62.4 63 0.0022 28.3 10.5 126 66-214 24-158 (297)
348 1qo2_A Molecule: N-((5-phospho 62.2 53 0.0018 27.2 9.6 114 74-195 86-224 (241)
349 2z6i_A Trans-2-enoyl-ACP reduc 61.9 84 0.0029 27.7 11.8 117 61-193 67-190 (332)
350 3cpr_A Dihydrodipicolinate syn 61.8 83 0.0029 27.6 12.3 126 66-214 33-167 (304)
351 1ydo_A HMG-COA lyase; TIM-barr 61.7 8.4 0.00029 34.4 4.6 54 67-122 154-208 (307)
352 3tsm_A IGPS, indole-3-glycerol 61.3 55 0.0019 28.8 9.8 121 64-193 123-248 (272)
353 1o5k_A DHDPS, dihydrodipicolin 61.1 61 0.0021 28.5 10.2 126 66-214 29-163 (306)
354 2ekc_A AQ_1548, tryptophan syn 61.1 38 0.0013 29.1 8.7 111 73-195 112-235 (262)
355 1eep_A Inosine 5'-monophosphat 61.0 45 0.0016 30.3 9.6 126 59-193 143-284 (404)
356 1vd6_A Glycerophosphoryl diest 60.9 39 0.0013 28.0 8.5 82 100-191 128-211 (224)
357 2dqw_A Dihydropteroate synthas 60.9 63 0.0022 28.8 10.3 141 68-220 50-220 (294)
358 3can_A Pyruvate-formate lyase- 60.8 39 0.0013 26.5 8.1 77 153-229 80-180 (182)
359 3l5a_A NADH/flavin oxidoreduct 60.8 21 0.0007 33.3 7.3 123 71-193 171-345 (419)
360 3no3_A Glycerophosphodiester p 60.6 8.5 0.00029 32.6 4.3 72 78-165 166-237 (238)
361 3usb_A Inosine-5'-monophosphat 60.4 53 0.0018 31.2 10.3 80 57-144 244-324 (511)
362 3c6c_A 3-keto-5-aminohexanoate 60.3 6.8 0.00023 35.6 3.8 100 127-231 47-187 (316)
363 1f6k_A N-acetylneuraminate lya 60.2 86 0.003 27.3 11.6 126 66-214 20-155 (293)
364 1twd_A Copper homeostasis prot 60.0 36 0.0012 30.0 8.3 121 67-192 70-196 (256)
365 2qgh_A Diaminopimelate decarbo 59.8 94 0.0032 28.2 11.6 152 53-228 54-238 (425)
366 3kru_A NADH:flavin oxidoreduct 59.8 30 0.001 31.3 8.1 119 73-193 146-306 (343)
367 3aty_A Tcoye, prostaglandin F2 59.8 20 0.00069 32.9 7.0 119 73-193 177-335 (379)
368 2o55_A Putative glycerophospho 59.8 22 0.00074 30.1 6.8 67 78-162 184-254 (258)
369 1mxs_A KDPG aldolase; 2-keto-3 59.6 43 0.0015 28.4 8.6 101 74-192 89-193 (225)
370 3gza_A Putative alpha-L-fucosi 59.6 13 0.00044 35.3 5.7 97 126-235 60-185 (443)
371 1bxb_A Xylose isomerase; xylos 59.4 48 0.0016 29.8 9.4 46 126-171 34-89 (387)
372 3ble_A Citramalate synthase fr 59.2 14 0.00048 33.3 5.7 100 68-169 167-274 (337)
373 3gka_A N-ethylmaleimide reduct 59.2 6.6 0.00022 36.1 3.5 80 71-163 251-331 (361)
374 2tps_A Protein (thiamin phosph 59.0 29 0.00097 28.3 7.2 69 75-145 128-200 (227)
375 2f6u_A GGGPS, (S)-3-O-geranylg 58.9 12 0.0004 32.5 4.9 80 120-206 10-95 (234)
376 1rd5_A Tryptophan synthase alp 58.8 67 0.0023 27.1 9.8 113 76-196 111-232 (262)
377 1bxb_A Xylose isomerase; xylos 58.5 14 0.00048 33.3 5.6 128 70-199 33-218 (387)
378 3s5o_A 4-hydroxy-2-oxoglutarat 58.5 93 0.0032 27.3 11.0 126 66-214 31-167 (307)
379 3gnn_A Nicotinate-nucleotide p 58.4 13 0.00045 33.5 5.3 75 153-245 195-272 (298)
380 3ve9_A Orotidine-5'-phosphate 58.3 42 0.0015 28.3 8.3 76 64-148 5-86 (215)
381 2x7v_A Probable endonuclease 4 58.3 72 0.0025 26.3 9.8 50 119-168 5-63 (287)
382 3fkr_A L-2-keto-3-deoxyarabona 58.3 98 0.0033 27.3 11.7 125 65-214 24-161 (309)
383 2hjp_A Phosphonopyruvate hydro 58.2 9.3 0.00032 34.1 4.3 107 69-186 165-277 (290)
384 2uv8_G Fatty acid synthase sub 58.2 31 0.0011 38.7 9.1 122 106-237 633-773 (2051)
385 2j66_A BTRK, decarboxylase; bu 58.1 1.1E+02 0.0037 27.7 12.4 99 57-176 41-143 (428)
386 3cwo_X Beta/alpha-barrel prote 58.1 39 0.0013 26.8 7.7 90 71-166 131-225 (237)
387 4ab4_A Xenobiotic reductase B; 58.1 7 0.00024 35.9 3.5 79 71-162 243-322 (362)
388 4gj1_A 1-(5-phosphoribosyl)-5- 57.9 6 0.0002 34.0 2.9 62 175-244 31-94 (243)
389 3fa4_A 2,3-dimethylmalate lyas 57.8 17 0.00057 32.8 5.9 104 71-186 168-279 (302)
390 3qst_A Triosephosphate isomera 57.7 66 0.0022 28.2 9.6 112 131-244 82-225 (255)
391 3paj_A Nicotinate-nucleotide p 57.6 21 0.00073 32.4 6.6 74 154-245 218-294 (320)
392 2qjg_A Putative aldolase MJ040 57.3 21 0.00071 30.3 6.3 83 71-162 167-254 (273)
393 1szn_A Alpha-galactosidase; (b 57.2 1.2E+02 0.0041 28.0 14.2 71 67-176 26-101 (417)
394 3gka_A N-ethylmaleimide reduct 57.1 19 0.00065 32.9 6.3 116 72-193 163-315 (361)
395 2vef_A Dihydropteroate synthas 56.7 54 0.0018 29.4 9.1 97 68-173 31-137 (314)
396 2zvr_A Uncharacterized protein 56.7 25 0.00087 29.6 6.7 15 132-146 75-89 (290)
397 1yya_A Triosephosphate isomera 56.6 1E+02 0.0034 26.9 11.0 115 131-245 79-223 (250)
398 3qfe_A Putative dihydrodipicol 56.3 1.1E+02 0.0037 27.1 12.0 127 66-215 28-166 (318)
399 3ajx_A 3-hexulose-6-phosphate 56.3 73 0.0025 25.5 9.2 114 74-195 68-187 (207)
400 3obe_A Sugar phosphate isomera 56.2 32 0.0011 29.7 7.4 113 58-170 21-168 (305)
401 3ngf_A AP endonuclease, family 56.0 39 0.0013 28.1 7.7 48 68-122 21-69 (269)
402 1ka9_F Imidazole glycerol phos 55.9 35 0.0012 28.3 7.4 93 71-168 153-249 (252)
403 2vxn_A Triosephosphate isomera 55.8 81 0.0028 27.5 9.9 113 131-244 81-224 (251)
404 2oo0_A ODC, ornithine decarbox 55.8 99 0.0034 28.8 11.2 121 105-235 103-248 (471)
405 2ze3_A DFA0005; organic waste 55.7 24 0.00083 31.1 6.5 86 69-165 167-254 (275)
406 3a5f_A Dihydrodipicolinate syn 55.6 54 0.0019 28.6 8.8 125 67-214 19-152 (291)
407 3ks6_A Glycerophosphoryl diest 55.6 32 0.0011 29.1 7.1 85 100-192 138-230 (250)
408 3cz8_A Putative sporulation-sp 55.5 40 0.0014 29.6 8.0 67 132-198 105-185 (319)
409 1x1o_A Nicotinate-nucleotide p 55.4 33 0.0011 30.5 7.4 74 154-245 182-259 (286)
410 1xim_A D-xylose isomerase; iso 55.3 48 0.0016 29.8 8.7 47 126-172 34-90 (393)
411 1xm3_A Thiazole biosynthesis p 55.1 16 0.00055 31.6 5.2 69 74-145 138-207 (264)
412 3n2b_A Diaminopimelate decarbo 55.0 1.3E+02 0.0045 27.7 13.8 159 57-236 77-266 (441)
413 3qja_A IGPS, indole-3-glycerol 54.7 66 0.0023 28.0 9.2 121 65-194 117-242 (272)
414 3sgz_A Hydroxyacid oxidase 2; 54.7 40 0.0014 30.9 8.0 126 66-193 131-300 (352)
415 1y0e_A Putative N-acetylmannos 54.6 85 0.0029 25.4 11.8 116 73-194 78-204 (223)
416 2yx0_A Radical SAM enzyme; pre 54.5 89 0.0031 27.2 10.1 139 87-230 143-312 (342)
417 1p0k_A Isopentenyl-diphosphate 54.5 1.1E+02 0.0039 26.9 11.2 118 76-194 133-280 (349)
418 1tv5_A Dhodehase, dihydroorota 54.2 1.4E+02 0.0047 28.1 11.8 158 58-226 180-430 (443)
419 3r2g_A Inosine 5'-monophosphat 54.2 16 0.00055 33.6 5.3 69 70-144 99-168 (361)
420 2nq5_A 5-methyltetrahydroptero 54.1 67 0.0023 32.2 10.2 144 71-219 571-737 (755)
421 3apt_A Methylenetetrahydrofola 54.1 55 0.0019 29.1 8.7 123 60-184 74-220 (310)
422 2vp8_A Dihydropteroate synthas 53.9 41 0.0014 30.4 7.9 145 68-226 63-245 (318)
423 2hsa_B 12-oxophytodienoate red 53.5 51 0.0018 30.4 8.7 122 71-193 172-347 (402)
424 3btn_A Antizyme inhibitor 1; T 53.4 83 0.0028 29.0 10.1 121 105-235 93-238 (448)
425 2nx9_A Oxaloacetate decarboxyl 53.4 20 0.00068 34.1 5.9 101 68-170 156-262 (464)
426 2r8w_A AGR_C_1641P; APC7498, d 53.4 1.2E+02 0.004 27.1 10.8 126 66-214 51-185 (332)
427 3cny_A Inositol catabolism pro 53.4 33 0.0011 28.7 6.8 42 127-171 33-74 (301)
428 2hmc_A AGR_L_411P, dihydrodipi 53.2 1.2E+02 0.0042 27.2 11.0 123 66-213 43-174 (344)
429 1vrd_A Inosine-5'-monophosphat 53.2 16 0.00056 34.1 5.3 69 70-144 236-305 (494)
430 2vc6_A MOSA, dihydrodipicolina 52.7 78 0.0027 27.6 9.4 127 66-215 17-152 (292)
431 3qok_A Putative chitinase II; 52.3 23 0.00078 32.4 6.0 67 131-197 140-226 (420)
432 3kru_A NADH:flavin oxidoreduct 52.0 24 0.00081 32.0 6.0 85 57-145 214-307 (343)
433 3k13_A 5-methyltetrahydrofolat 52.0 55 0.0019 29.2 8.3 100 61-171 28-139 (300)
434 1k77_A EC1530, hypothetical pr 51.8 95 0.0033 25.2 9.8 102 126-232 16-145 (260)
435 1vcf_A Isopentenyl-diphosphate 51.7 62 0.0021 28.6 8.7 106 127-237 134-267 (332)
436 3vnd_A TSA, tryptophan synthas 51.6 18 0.0006 31.8 4.9 31 115-145 17-52 (267)
437 2e28_A Pyruvate kinase, PK; al 51.6 19 0.00065 35.3 5.6 103 116-225 164-273 (587)
438 3eoo_A Methylisocitrate lyase; 51.4 1E+02 0.0036 27.4 10.1 76 67-146 95-192 (298)
439 2p10_A MLL9387 protein; putati 51.1 1.4E+02 0.0047 26.8 11.2 154 76-237 41-239 (286)
440 1jnd_A Imaginal DISC growth fa 50.8 33 0.0011 31.4 6.8 44 154-197 173-223 (420)
441 2y7e_A 3-keto-5-aminohexanoate 50.7 9 0.00031 34.2 2.9 99 127-231 33-150 (282)
442 3lye_A Oxaloacetate acetyl hyd 50.1 95 0.0032 27.9 9.6 30 67-98 100-129 (307)
443 1s2w_A Phosphoenolpyruvate pho 50.1 14 0.00047 33.1 4.0 108 69-186 169-280 (295)
444 3bg3_A Pyruvate carboxylase, m 50.0 17 0.00057 36.6 5.0 101 68-170 259-366 (718)
445 3cwo_X Beta/alpha-barrel prote 49.9 93 0.0032 24.5 9.5 154 75-244 17-193 (237)
446 2i9e_A Triosephosphate isomera 49.9 86 0.0029 27.5 9.1 113 131-244 79-220 (259)
447 3vk5_A MOEO5; TIM barrel, tran 49.6 31 0.0011 31.0 6.2 83 105-196 29-125 (286)
448 2gjl_A Hypothetical protein PA 49.5 40 0.0014 29.6 7.0 110 70-193 83-200 (328)
449 2fli_A Ribulose-phosphate 3-ep 49.4 78 0.0027 25.6 8.3 121 64-195 68-199 (220)
450 2ocz_A 3-dehydroquinate dehydr 49.2 73 0.0025 27.0 8.4 86 68-162 76-165 (231)
451 1yad_A Regulatory protein TENI 49.1 36 0.0012 27.9 6.3 81 57-145 110-192 (221)
452 2p0o_A Hypothetical protein DU 49.0 1.5E+02 0.0051 27.4 11.0 100 59-175 69-181 (372)
453 1xla_A D-xylose isomerase; iso 48.7 31 0.0011 31.1 6.3 128 70-199 33-218 (394)
454 1xg4_A Probable methylisocitra 48.6 1.4E+02 0.0047 26.5 10.4 78 65-146 89-188 (295)
455 3ewb_X 2-isopropylmalate synth 48.5 31 0.0011 30.4 6.1 75 67-143 147-227 (293)
456 2v5b_A Triosephosphate isomera 48.3 97 0.0033 26.9 9.1 114 131-245 74-218 (244)
457 3vab_A Diaminopimelate decarbo 48.1 1.7E+02 0.0057 27.0 13.8 163 53-236 70-263 (443)
458 3mcm_A 2-amino-4-hydroxy-6-hyd 47.9 29 0.001 32.9 6.1 103 67-177 209-327 (442)
459 2a5h_A L-lysine 2,3-aminomutas 47.6 1.7E+02 0.0057 26.8 12.1 101 68-174 146-263 (416)
460 3dlo_A Universal stress protei 47.5 56 0.0019 24.9 6.8 77 138-214 53-144 (155)
461 3fnd_A Chitinase; TIM-barrel, 47.5 26 0.0009 30.7 5.5 67 131-198 98-172 (312)
462 3qz6_A HPCH/HPAI aldolase; str 47.2 69 0.0023 27.6 8.0 74 117-193 16-94 (261)
463 1qwg_A PSL synthase;, (2R)-pho 47.2 98 0.0033 27.2 9.0 88 126-213 86-193 (251)
464 3rlg_A Sphingomyelin phosphodi 47.1 21 0.00072 32.3 4.7 99 72-179 194-298 (302)
465 1vc4_A Indole-3-glycerol phosp 47.0 70 0.0024 27.5 8.0 121 64-194 109-236 (254)
466 3kts_A Glycerol uptake operon 47.0 23 0.0008 29.9 4.8 78 57-144 101-178 (192)
467 3txv_A Probable tagatose 6-pho 46.9 2E+02 0.0067 27.4 12.4 182 60-245 22-280 (450)
468 1zlp_A PSR132, petal death pro 46.7 42 0.0014 30.4 6.7 31 68-100 114-144 (318)
469 3zen_D Fatty acid synthase; tr 46.5 31 0.0011 40.2 7.0 128 106-237 471-617 (3089)
470 1zcc_A Glycerophosphodiester p 46.4 57 0.0019 27.4 7.2 85 100-191 133-220 (248)
471 1p4c_A L(+)-mandelate dehydrog 46.3 38 0.0013 30.9 6.5 87 102-193 212-306 (380)
472 2btm_A TIM, protein (triosepho 46.2 1.4E+02 0.0048 26.0 9.9 113 131-244 79-222 (252)
473 2yzr_A Pyridoxal biosynthesis 46.2 54 0.0018 30.0 7.4 51 73-124 27-83 (330)
474 1sgj_A Citrate lyase, beta sub 46.0 61 0.0021 28.1 7.5 161 62-233 9-192 (284)
475 1nvm_A HOA, 4-hydroxy-2-oxoval 45.9 72 0.0025 28.5 8.2 112 67-186 146-265 (345)
476 1aj0_A DHPS, dihydropteroate s 45.8 1.5E+02 0.0053 26.0 10.2 142 67-220 35-208 (282)
477 3krs_A Triosephosphate isomera 45.8 1.1E+02 0.0038 27.1 9.2 114 131-244 103-244 (271)
478 3hgm_A Universal stress protei 45.8 40 0.0014 24.7 5.6 60 154-213 72-136 (147)
479 2j27_A Triosephosphate isomera 45.7 1.3E+02 0.0045 26.1 9.6 113 131-244 80-223 (250)
480 1o94_A Tmadh, trimethylamine d 45.7 45 0.0015 32.8 7.3 133 60-193 121-320 (729)
481 4ab4_A Xenobiotic reductase B; 45.6 33 0.0011 31.3 6.0 115 73-193 156-307 (362)
482 3tfx_A Orotidine 5'-phosphate 45.3 14 0.00049 32.4 3.3 91 64-163 8-107 (259)
483 2hk0_A D-psicose 3-epimerase; 45.1 80 0.0028 26.7 8.1 104 128-232 40-172 (309)
484 2g0w_A LMO2234 protein; putati 44.3 1.3E+02 0.0044 25.3 9.3 45 126-170 37-86 (296)
485 2pgw_A Muconate cycloisomerase 44.3 85 0.0029 28.1 8.4 127 55-193 134-270 (384)
486 3h5d_A DHDPS, dihydrodipicolin 44.2 1.7E+02 0.0057 25.8 10.5 126 66-214 24-159 (311)
487 1viz_A PCRB protein homolog; s 44.2 28 0.00096 30.1 5.0 74 120-199 10-89 (240)
488 1mzh_A Deoxyribose-phosphate a 44.1 1.4E+02 0.0048 24.9 10.1 97 132-237 77-186 (225)
489 3kxq_A Triosephosphate isomera 44.1 1.7E+02 0.0057 25.9 10.1 113 131-245 105-246 (275)
490 3m9y_A Triosephosphate isomera 44.0 1.6E+02 0.0055 25.6 10.3 112 131-244 83-226 (254)
491 1qpo_A Quinolinate acid phosph 43.9 61 0.0021 28.7 7.3 83 105-192 183-267 (284)
492 1rvg_A Fructose-1,6-bisphospha 43.7 28 0.00095 31.4 5.0 101 69-178 152-256 (305)
493 1gox_A (S)-2-hydroxy-acid oxid 43.4 58 0.002 29.5 7.2 126 66-193 132-308 (370)
494 3dx5_A Uncharacterized protein 43.0 35 0.0012 28.4 5.4 103 126-232 16-144 (286)
495 2qw5_A Xylose isomerase-like T 42.9 35 0.0012 29.5 5.5 134 54-189 7-207 (335)
496 3bw2_A 2-nitropropane dioxygen 42.6 43 0.0015 30.1 6.1 70 74-144 156-236 (369)
497 3l5a_A NADH/flavin oxidoreduct 42.5 21 0.00073 33.2 4.2 88 58-147 247-348 (419)
498 1muw_A Xylose isomerase; atomi 42.5 55 0.0019 29.3 6.8 136 54-189 4-206 (386)
499 3ikh_A Carbohydrate kinase; tr 42.5 36 0.0012 29.0 5.4 54 137-193 130-183 (299)
500 2hzg_A Mandelate racemase/muco 42.4 1.4E+02 0.0049 26.8 9.8 128 55-193 131-276 (401)
No 1
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=100.00 E-value=7.3e-64 Score=447.24 Aligned_cols=188 Identities=44% Similarity=0.719 Sum_probs=180.5
Q ss_pred CCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHH
Q 025927 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDF 134 (246)
Q Consensus 56 ~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~ 134 (246)
++++|+|||||+|+.+|++++++++++|+||+|+|||||+||||++|||+++++||+.| ++|+|+|||+.||++|++.|
T Consensus 26 ~~~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~ 105 (246)
T 3inp_A 26 KHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESF 105 (246)
T ss_dssp -CCEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHH
T ss_pred cCCeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
+++|||+||||.|+ ..++.++++.||++|+|+|++|||+||++.++++++.+|+|++|||+||||||+|+|++++||+
T Consensus 106 ~~aGAd~itvH~Ea--~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~ 183 (246)
T 3inp_A 106 AKAGATSIVFHPEA--SEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAK 183 (246)
T ss_dssp HHHTCSEEEECGGG--CSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHHHHHH
T ss_pred HHcCCCEEEEcccc--chhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCCcccchHHHHHHH
Confidence 99999999999996 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 215 DLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++|++++++|+++.|+||||||.+|++++++
T Consensus 184 ~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~ 214 (246)
T 3inp_A 184 EISKWISSTDRDILLEIDGGVNPYNIAEIAV 214 (246)
T ss_dssp HHHHHHHHHTSCCEEEEESSCCTTTHHHHHT
T ss_pred HHHHHHHhcCCCeeEEEECCcCHHHHHHHHH
Confidence 9999999999999999999999999999875
No 2
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=100.00 E-value=5.8e-62 Score=430.51 Aligned_cols=185 Identities=32% Similarity=0.630 Sum_probs=179.0
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
+|+|||||+|+.+|+++++.+ ++|+||+|+||||||||||++||++++++||++|+.|+|+||||.||++|++.|.++|
T Consensus 2 ~i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aG 80 (231)
T 3ctl_A 2 KISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAG 80 (231)
T ss_dssp EEEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHT
T ss_pred eEEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcC
Confidence 699999999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHHH
Q 025927 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRR 218 (246)
Q Consensus 139 ad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~ 218 (246)
||+||||+|+. +.++.++++.||++|+++|+++||+||++.++++++.+|+|++|||+||||||+|+|.+++||+++|+
T Consensus 81 Ad~itvh~Ea~-~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~ 159 (231)
T 3ctl_A 81 ADFITLHPETI-NGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKA 159 (231)
T ss_dssp CSEEEECGGGC-TTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHH
T ss_pred CCEEEECcccC-CccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHH
Confidence 99999999961 35799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 219 MCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 219 l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+++++|+++.|+||||||.+|++++++
T Consensus 160 ~~~~~~~~~~I~VdGGI~~~~~~~~~~ 186 (231)
T 3ctl_A 160 WREREGLEYEIEVDGSCNQATYEKLMA 186 (231)
T ss_dssp HHHHHTCCCEEEEESCCSTTTHHHHHH
T ss_pred HHhccCCCceEEEECCcCHHHHHHHHH
Confidence 999999999999999999999998864
No 3
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=100.00 E-value=2.5e-59 Score=412.42 Aligned_cols=184 Identities=40% Similarity=0.647 Sum_probs=175.1
Q ss_pred CCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC--CCCCeeEEEeccCcccchHH
Q 025927 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPD 133 (246)
Q Consensus 56 ~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~--t~~plDvHLMV~~P~~~i~~ 133 (246)
.+++|+|||||+|+.+|+++++.++++|+||+|+||||||||||++|||+++++||+. +++|+|+|||+.+|++|++.
T Consensus 3 ~~~~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~ 82 (228)
T 3ovp_A 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKP 82 (228)
T ss_dssp -CCEEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHH
T ss_pred CCcEeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999998 68999999999999999999
Q ss_pred HHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHH
Q 025927 134 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 134 ~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
|+++|+|+||||.|+ ..++.++++.||++|+++|+++||+||++.++++++.+|+|++|||+|||+||+|+|.+++||
T Consensus 83 ~~~aGad~itvH~Ea--~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki 160 (228)
T 3ovp_A 83 MAVAGANQYTFHLEA--TENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 160 (228)
T ss_dssp HHHHTCSEEEEEGGG--CSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGHHHH
T ss_pred HHHcCCCEEEEccCC--chhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCCcccCHHHHHHH
Confidence 999999999999996 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+++|++. .++.|+||||||.+|++++++
T Consensus 161 ~~lr~~~----~~~~I~VdGGI~~~t~~~~~~ 188 (228)
T 3ovp_A 161 HWLRTQF----PSLDIEVDGGVGPDTVHKCAE 188 (228)
T ss_dssp HHHHHHC----TTCEEEEESSCSTTTHHHHHH
T ss_pred HHHHHhc----CCCCEEEeCCcCHHHHHHHHH
Confidence 9999874 257899999999999998764
No 4
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=100.00 E-value=4e-59 Score=411.76 Aligned_cols=181 Identities=37% Similarity=0.663 Sum_probs=173.8
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFI 135 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~ 135 (246)
+.+|+|||||+|+.+|+++++.++++|+||+|+||||||||||++||+..+++||++| +.++|+||||.||++|++.|+
T Consensus 5 ~~~i~pSila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~ 84 (227)
T 1tqx_A 5 KAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLK 84 (227)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCT
T ss_pred CCeEEeehhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred hcCCCEEEEccCCcccc-cHHHHHH---HHHHcCCcEEEEEcCCCChHHHHHhhh--hcceEEEEeecCCCCCCcccHHH
Q 025927 136 KAGADIVSVHCEQSSTI-HLHRTLN---QIKDLGAKAGVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQ 209 (246)
Q Consensus 136 ~agad~It~H~E~~~~~-~~~~~i~---~Ik~~G~k~GlAlnP~Tpve~l~~~l~--~vD~VLvMsV~PGfgGQ~F~~~~ 209 (246)
+ ||++|||+|+ +. ++.++++ .||++|+|+|+++||+||++.++++++ .+|+||+|||+|||+||+|.|.+
T Consensus 85 ~--Ad~itvH~ea--~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~ 160 (227)
T 1tqx_A 85 T--SNQLTFHFEA--LNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDM 160 (227)
T ss_dssp T--SSEEEEEGGG--GTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGG
T ss_pred h--CCEEEEeecC--CccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHH
Confidence 9 9999999997 44 7999999 999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 210 VKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 210 l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++||+++|++++ ++.|+||||||.+|++++++
T Consensus 161 l~ki~~lr~~~~----~~~I~VdGGI~~~ti~~~~~ 192 (227)
T 1tqx_A 161 MGKVSFLRKKYK----NLNIQVDGGLNIETTEISAS 192 (227)
T ss_dssp HHHHHHHHHHCT----TCEEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcc----CCeEEEECCCCHHHHHHHHH
Confidence 999999999984 57899999999999998864
No 5
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=100.00 E-value=2.6e-57 Score=402.69 Aligned_cols=183 Identities=24% Similarity=0.357 Sum_probs=177.4
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
+|+|||||+|+.+|+++++.++++|+||+|+||||||||||++||++.+++||++|+. |+||||++|++|++.|.++|
T Consensus 15 ~i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~~--DvhLMv~~p~~~i~~~~~aG 92 (237)
T 3cu2_A 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFK--DVHLMVRNQLEVAKAVVANG 92 (237)
T ss_dssp CEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSEE--EEEEECSCHHHHHHHHHHTT
T ss_pred eEEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCCC--CeEEEEECHHHHHHHHHHcC
Confidence 5999999999999999999999999999999999999999999999999999999875 99999999999999999999
Q ss_pred CCEEEEccCCcccccHHHHHHHHHHc---------CCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHH
Q 025927 139 ADIVSVHCEQSSTIHLHRTLNQIKDL---------GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQ 209 (246)
Q Consensus 139 ad~It~H~E~~~~~~~~~~i~~Ik~~---------G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~ 209 (246)
||+||||+|+ ..++.+++++||+. |+++|+++||+||++.++++++.+|+|++|||+||||||+|.|.+
T Consensus 93 Ad~itvH~ea--~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~ 170 (237)
T 3cu2_A 93 ANLVTLQLEQ--YHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELI 170 (237)
T ss_dssp CSEEEEETTC--TTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEESEETTTTEECCHHHH
T ss_pred CCEEEEecCC--cccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeeeeccCcCCeecChhH
Confidence 9999999997 46799999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 210 VKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 210 l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++||+++|++++++|+++.|+||||||.+|++++++
T Consensus 171 l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~ 206 (237)
T 3cu2_A 171 LDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQ 206 (237)
T ss_dssp HHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHH
Confidence 999999999999988889999999999999998865
No 6
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=100.00 E-value=5.2e-52 Score=364.89 Aligned_cols=187 Identities=68% Similarity=1.128 Sum_probs=176.4
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHh
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK 136 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ 136 (246)
.++|+|||+|+|+.++.++++.++++|+||+|+|+|||+||||++||++.+++||+.|+.|+|+|||+.||++|++.+.+
T Consensus 4 ~~~i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~ 83 (230)
T 1tqj_A 4 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAK 83 (230)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHH
T ss_pred CcEEEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEccC--CcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 137 AGADIVSVHCE--QSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 137 agad~It~H~E--~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
+|||.|++|.| + .+++.++++.+++.|+++|+++||+||.+.++++++.+|+|++|+|+||||||+|.+..++||+
T Consensus 84 aGadgv~vh~e~~~--~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~ 161 (230)
T 1tqj_A 84 AGADIISVHVEHNA--SPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIR 161 (230)
T ss_dssp HTCSEEEEECSTTT--CTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHH
T ss_pred cCCCEEEECccccc--chhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHH
Confidence 99999999999 7 4678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 215 DLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++|++++++|+++.|+||||||.+|++++.+
T Consensus 162 ~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~ 192 (230)
T 1tqj_A 162 ALRQMCDERGLDPWIEVDGGLKPNNTWQVLE 192 (230)
T ss_dssp HHHHHHHHHTCCCEEEEESSCCTTTTHHHHH
T ss_pred HHHHHHHhcCCCCcEEEECCcCHHHHHHHHH
Confidence 9999999989999999999999999998754
No 7
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=100.00 E-value=2.8e-45 Score=319.77 Aligned_cols=183 Identities=39% Similarity=0.673 Sum_probs=173.0
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHh
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK 136 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ 136 (246)
..+|+|||+++|+.++.++++.++++|+||+|+|+|||+|+||+++|++.+++||+.++.+++|||||.||++|++.+.+
T Consensus 6 ~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~ 85 (228)
T 1h1y_A 6 AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAK 85 (228)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHH
T ss_pred CCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred cCCCEEEEccCCcccccH-HHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh---hcceEEEEeecCCCCCCcccHHHHHH
Q 025927 137 AGADIVSVHCEQSSTIHL-HRTLNQIKDLGAKAGVVLNPATSLSAIECVLD---VVDLVLIMSVNPGFGGQSFIESQVKK 212 (246)
Q Consensus 137 agad~It~H~E~~~~~~~-~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~---~vD~VLvMsV~PGfgGQ~F~~~~l~K 212 (246)
+|+|.|++|.|. .+++ .++++.+|+.|+++|++++|.||++.++++++ .+|+|++|+|+|||+||+|.+..++|
T Consensus 86 agad~v~vH~~~--~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~ 163 (228)
T 1h1y_A 86 AGASGFTFHIEV--SRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEK 163 (228)
T ss_dssp HTCSEEEEEGGG--CTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred cCCCEEEECCCC--cccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHH
Confidence 999999999996 4566 89999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 213 ISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++++|++.. ++.|+||||||.+|++++++
T Consensus 164 i~~~~~~~~----~~pi~v~GGI~~~ni~~~~~ 192 (228)
T 1h1y_A 164 VRALRKKYP----SLDIEVDGGLGPSTIDVAAS 192 (228)
T ss_dssp HHHHHHHCT----TSEEEEESSCSTTTHHHHHH
T ss_pred HHHHHHhcC----CCCEEEECCcCHHHHHHHHH
Confidence 999999863 46899999999999988753
No 8
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=100.00 E-value=1.6e-40 Score=288.15 Aligned_cols=196 Identities=89% Similarity=1.377 Sum_probs=182.8
Q ss_pred cccccCCCCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCc
Q 025927 48 ARVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEP 127 (246)
Q Consensus 48 ~~~~~~~~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P 127 (246)
+|.+.+++..++|+||++++|+.++.+.++.+.+.|+||+|+|+|||+|+||+++|++.+++||+.++.++++|||+.+|
T Consensus 1 ~~~~~~~~~~~~i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~ 80 (230)
T 1rpx_A 1 SRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEP 80 (230)
T ss_dssp CGGGGSCTTSCEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSH
T ss_pred CCCCccCCCceEEEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecCH
Confidence 45666677778899999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ccchHHHHhcCCCEEEEccC--CcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcc
Q 025927 128 EQRVPDFIKAGADIVSVHCE--QSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSF 205 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E--~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F 205 (246)
+++++.+.++|+|.|++|.| . .+.+.++++.+++.|+++|++++|+|+.+.++.+.+.+|+|++|++.|||+||.|
T Consensus 81 ~~~v~~~~~~Gad~v~vh~~~~~--~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 81 DQRVPDFIKAGADIVSVHCEQSS--TIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHHTTCSEEEEECSTTT--CSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHHcCCCEEEEEecCcc--chhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 99999999999999999999 6 3567789999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 206 IESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 206 ~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
.+..+++++++|++.+++++++.|.++||||.+|++++.+
T Consensus 159 ~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~ 198 (230)
T 1rpx_A 159 IESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIE 198 (230)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHH
Confidence 9999999999999998777778899999999999988643
No 9
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=100.00 E-value=2.7e-39 Score=277.09 Aligned_cols=187 Identities=45% Similarity=0.775 Sum_probs=176.5
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHh
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK 136 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ 136 (246)
.++|+|||+++|+.++.+.++.+++.|+||+|+|+|||+|++++++|++.+++||+.++.++++|+|+.+|.++++.+.+
T Consensus 3 ~~~~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~ 82 (220)
T 2fli_A 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQ 82 (220)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHH
T ss_pred CcEEEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred cCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHH
Q 025927 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (246)
Q Consensus 137 agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~l 216 (246)
+|+|.|++|.+. .+.+.++++.+++.|+++|++++|.|+.+.++++.+.+|+|++|++.|||+||.|.+..+++++++
T Consensus 83 ~gad~v~vh~~~--~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~ 160 (220)
T 2fli_A 83 AGADIMTIHTES--TRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATV 160 (220)
T ss_dssp HTCSEEEEEGGG--CSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHH
T ss_pred cCCCEEEEccCc--cccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHH
Confidence 999999999996 367888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
|++..+.++++.|.++||||.+|++++.+
T Consensus 161 ~~~~~~~~~~~~i~v~GGI~~~~~~~~~~ 189 (220)
T 2fli_A 161 AKWRDEKGLSFDIEVDGGVDNKTIRACYE 189 (220)
T ss_dssp HHHHHHTTCCCEEEEESSCCTTTHHHHHH
T ss_pred HHHHHhcCCCceEEEECcCCHHHHHHHHH
Confidence 99998776678899999999999988753
No 10
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=100.00 E-value=2.5e-35 Score=253.60 Aligned_cols=168 Identities=15% Similarity=0.098 Sum_probs=153.2
Q ss_pred eeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC--CCCCeeEEEe--ccCcccchHHHHhc
Q 025927 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLM--IVEPEQRVPDFIKA 137 (246)
Q Consensus 62 PSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~--t~~plDvHLM--V~~P~~~i~~~~~a 137 (246)
+.++++|+.+++++++.+++.|.+|+|+|||||+| ++||++.+++||+. +.+++|+||| .++|.+|++.+.++
T Consensus 1 ~lila~D~~~l~~~~~~~~~~~~~~~~~kv~~~~f---~~~G~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~ 77 (208)
T 2czd_A 1 MIVLALDVYEGERAIKIAKSVKDYISMIKVNWPLI---LGSGVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGA 77 (208)
T ss_dssp CEEEECCCCSHHHHHHHHHHHGGGCSEEEEEHHHH---HHHCTTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHT
T ss_pred CeEEEecCCCHHHHHHHHHHhcccccEEEecHHHH---HhhCHHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999 99999999999997 7889999999 99999999999999
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHh-hhhcceEEEEeecCCCCCCcccHHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECV-LDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~-l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~l 216 (246)
|||+||+|+|+ .. .+++.+++.| |++++|.||.+.++++ ++.+|.++.|+++|||+||+|.+.+++|++++
T Consensus 78 Gad~vtvh~~~--g~---~~i~~~~~~~---gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~l 149 (208)
T 2czd_A 78 GADYVIVHTFV--GR---DSVMAVKELG---EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPERIGYI 149 (208)
T ss_dssp TCSEEEEESTT--CH---HHHHHHHTTS---EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSSTHHHHHH
T ss_pred CCCEEEEeccC--CH---HHHHHHHHhC---CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHH
Confidence 99999999996 22 3588999888 9999999999998877 88999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCChh--hhhhcc
Q 025927 217 RRMCLEKGVNPWIEVDGGVGPK--NAYKVP 244 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e--~i~~l~ 244 (246)
|+.+ +.++.| |||||+.+ |+.++.
T Consensus 150 r~~~---~~~~~i-v~gGI~~~g~~~~~~~ 175 (208)
T 2czd_A 150 RDRL---KEGIKI-LAPGIGAQGGKAKDAV 175 (208)
T ss_dssp HHHS---CTTCEE-EECCCCSSTTHHHHHH
T ss_pred HHhC---CCCeEE-EECCCCCCCCCHHHHH
Confidence 9886 445666 99999998 776654
No 11
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.96 E-value=1.4e-30 Score=224.79 Aligned_cols=168 Identities=14% Similarity=0.133 Sum_probs=144.7
Q ss_pred eeeecccChhhHHHHHHHHHHcCCCEEE-eeeccCcccCCCCCCHHHHhhcccC---CCCCeeEEEeccCcccchHHHHh
Q 025927 61 SPSILSANFAKLGEQVKAVELAGCDWIH-VDVMDGRFVPNITIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFIK 136 (246)
Q Consensus 61 sPSIl~aD~~~l~~~i~~l~~~g~d~lH-iDIMDG~FVpN~tfgp~~I~~ir~~---t~~plDvHLMV~~P~~~i~~~~~ 136 (246)
++|++++|+.+++++++.+++.| +++| +|||||+| ++|||+.|++||+. +.+++|+||| ..|..+++.+.+
T Consensus 4 ~~~ilalD~~~~~~~~~~~~~~~-~~v~~~kv~~~~f---~~~G~~~i~~l~~~~p~~~v~lD~kl~-dip~t~~~~~~~ 78 (216)
T 1q6o_A 4 PMLQVALDNQTMDSAYETTRLIA-EEVDIIEVGTILC---VGEGVRAVRDLKALYPHKIVLADAKIA-DAGKILSRMCFE 78 (216)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHG-GGCSEEEECHHHH---HHHCTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHH
T ss_pred CCeEEEECCCCHHHHHHHHHHhc-ccCCEEEECHHHH---HHhCHHHHHHHHHhCCCCeEEEEEEec-ccHHHHHHHHHh
Confidence 58999999999999999999887 4444 79999999 89999999999986 6789999999 589999999999
Q ss_pred cCCCEEEEccCCccccc-HHHHHHHHHHcCCcEEEEEc-C--CCChHHHHHhhhhcceEE---EEeecCCCCCCcccHHH
Q 025927 137 AGADIVSVHCEQSSTIH-LHRTLNQIKDLGAKAGVVLN-P--ATSLSAIECVLDVVDLVL---IMSVNPGFGGQSFIESQ 209 (246)
Q Consensus 137 agad~It~H~E~~~~~~-~~~~i~~Ik~~G~k~GlAln-P--~Tpve~l~~~l~~vD~VL---vMsV~PGfgGQ~F~~~~ 209 (246)
+|||+||+|.|+ ..+ +.++++.+++.|+++|+.+. . .|+.+.++++ ...|+|+ .|+++|||+| +
T Consensus 79 ~Gad~itvh~~~--g~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~-~~~~~vl~~a~~~~~~G~~g------~ 149 (216)
T 1q6o_A 79 ANADWVTVICCA--DINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDA-GIGQVVYHRSRDAQAAGVAW------G 149 (216)
T ss_dssp TTCSEEEEETTS--CHHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHT-TCCEEEEECCHHHHHTTCCC------C
T ss_pred CCCCEEEEeccC--CHHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhc-CcHHHHHHHHHHHHhcCCCC------C
Confidence 999999999996 344 78999999999999998444 4 5777777765 5678999 9999999998 4
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 210 VKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 210 l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
.++++++|+.+. .++.|+|||||+.+|++++++
T Consensus 150 ~~~i~~lr~~~~---~~~~i~v~GGI~~~~~~~~~~ 182 (216)
T 1q6o_A 150 EADITAIKRLSD---MGFKVTVTGGLALEDLPLFKG 182 (216)
T ss_dssp HHHHHHHHHHHH---TTCEEEEESSCCGGGGGGGTT
T ss_pred HHHHHHHHHhcC---CCCcEEEECCcChhhHHHHHH
Confidence 778888888873 356799999999999988765
No 12
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.96 E-value=1.6e-28 Score=214.20 Aligned_cols=179 Identities=16% Similarity=0.221 Sum_probs=157.7
Q ss_pred CCCcEEeeeecccChh--hHHHHHHHHHHcCCCEEEee------eccCcccC-----------CCCCCHHHHhhcccCCC
Q 025927 55 KSDIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVD------VMDGRFVP-----------NITIGPLVVDALRPVTD 115 (246)
Q Consensus 55 ~~~~~IsPSIl~aD~~--~l~~~i~~l~~~g~d~lHiD------IMDG~FVp-----------N~tfgp~~I~~ir~~t~ 115 (246)
+++..++||++++|+. ++.+.++.++++ +|+||+| +|||+|++ |++++.+.++++|+.++
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 2 FKDGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp CCTTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred CCCccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 4466799999999995 899999999999 9999999 99999999 99999999999999877
Q ss_pred CCeeEEEecc-Cc------ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhc
Q 025927 116 LPLDVHLMIV-EP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV 188 (246)
Q Consensus 116 ~plDvHLMV~-~P------~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~v 188 (246)
+ .+|+|+. || +++++.+.++|+|.|++|.++ ..++.++++.+|+.|.+++++++|.|+.+.++.+...+
T Consensus 81 ~--pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~--~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~ 156 (248)
T 1geq_A 81 T--PIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLP--VFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMT 156 (248)
T ss_dssp C--CEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCC--GGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred C--CEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCC--hhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcC
Confidence 6 4999995 99 899999999999999999885 46788999999999999999999999999999999999
Q ss_pred c-eEEEEeecCCCCCCc--ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhcc
Q 025927 189 D-LVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVP 244 (246)
Q Consensus 189 D-~VLvMsV~PGfgGQ~--F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~ 244 (246)
| +|.+|++ ||++||+ |.+..+++++++++.. ++.|.++|||+. +|++++.
T Consensus 157 d~~i~~~~~-~G~~g~~~~~~~~~~~~i~~l~~~~-----~~pi~~~GGI~~~e~i~~~~ 210 (248)
T 1geq_A 157 TGFVYLVSL-YGTTGAREEIPKTAYDLLRRAKRIC-----RNKVAVGFGVSKREHVVSLL 210 (248)
T ss_dssp SSEEEEECC-C-------CCCHHHHHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHH
T ss_pred CCeEEEEEC-CccCCCCCCCChhHHHHHHHHHhhc-----CCCEEEEeecCCHHHHHHHH
Confidence 9 9989999 9999987 8899999999998875 367999999999 9998874
No 13
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.95 E-value=1.4e-29 Score=219.14 Aligned_cols=171 Identities=16% Similarity=0.209 Sum_probs=149.4
Q ss_pred eecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CC--CCeeEEEeccCcccchHHHHhcCC
Q 025927 63 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TD--LPLDVHLMIVEPEQRVPDFIKAGA 139 (246)
Q Consensus 63 SIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~--~plDvHLMV~~P~~~i~~~~~aga 139 (246)
=++|+|+.++++.++.+++.+ + |+|+|++.|++|+++|+++|++||+. ++ +++|+||| ..|..+++.++++|+
T Consensus 9 lilalD~~~~~~~~~~~~~~~-~--~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~-d~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 9 IQIALDQTNLTDAVAVASNVA-S--YVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTT-DGGAILSRMAFEAGA 84 (218)
T ss_dssp EEEEECCSSHHHHHHHHHHHG-G--GCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHHHTC
T ss_pred eEEEeCCCCHHHHHHHHHHhc-C--CceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeec-ccHHHHHHHHHhcCC
Confidence 378999999999999998753 2 89999999999999999999999986 44 67899999 789999999999999
Q ss_pred CEEEEccCCcccccHHHHHHHHHHcCCcEEE-EEcCCCChHHHHHhhh-hcceEE-EEeecCCCCCCcccHHHHHHHHHH
Q 025927 140 DIVSVHCEQSSTIHLHRTLNQIKDLGAKAGV-VLNPATSLSAIECVLD-VVDLVL-IMSVNPGFGGQSFIESQVKKISDL 216 (246)
Q Consensus 140 d~It~H~E~~~~~~~~~~i~~Ik~~G~k~Gl-AlnP~Tpve~l~~~l~-~vD~VL-vMsV~PGfgGQ~F~~~~l~KI~~l 216 (246)
|+|++|.|+. .+.+.++++.+|++|+++++ +++|.|+ +.++++.+ .+|++. .|+++||++||.|.++.++||+++
T Consensus 85 d~i~vh~~~~-~~~~~~~~~~~~~~g~~~~~d~l~~~T~-~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~ 162 (218)
T 3jr2_A 85 DWITVSAAAH-IATIAACKKVADELNGEIQIEIYGNWTM-QDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQL 162 (218)
T ss_dssp SEEEEETTSC-HHHHHHHHHHHHHHTCEEEEECCSSCCH-HHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHH
T ss_pred CEEEEecCCC-HHHHHHHHHHHHHhCCccceeeeecCCH-HHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHH
Confidence 9999999962 23468899999999999999 9999997 66777665 689865 599999999999999999999988
Q ss_pred HHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+. .++.|+||||||.+|++++.+
T Consensus 163 ~~------~~~pi~v~GGI~~~~~~~~~~ 185 (218)
T 3jr2_A 163 SA------LGIELSITGGIVPEDIYLFEG 185 (218)
T ss_dssp HH------TTCEEEEESSCCGGGGGGGTT
T ss_pred hC------CCCCEEEECCCCHHHHHHHHH
Confidence 64 357899999999999998765
No 14
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.95 E-value=2.2e-30 Score=229.20 Aligned_cols=169 Identities=16% Similarity=0.229 Sum_probs=149.8
Q ss_pred eeeecccChhhHHHHHHHHHHcC--CCE--EEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCccc---chH
Q 025927 61 SPSILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQ---RVP 132 (246)
Q Consensus 61 sPSIl~aD~~~l~~~i~~l~~~g--~d~--lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~---~i~ 132 (246)
+||++++|+.+++++++.+++.| ++| +|+|+| ++|||+.+++||+. +.+++|+||| ..|.. |++
T Consensus 15 ~~~ilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~lr~~~~~v~lD~kl~-Dip~t~~~~i~ 86 (245)
T 1eix_A 15 SPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMF-------TLFGPQFVRELQQRGFDIFLDLKFH-DIPNTAAHAVA 86 (245)
T ss_dssp CCEEEEECCSSHHHHHHHHTTSCTTTCEEEEEHHHH-------HHHHHHHHHHHHHTTCCEEEEEEEC-SCHHHHHHHHH
T ss_pred CCeEEEECCCCHHHHHHHHHHhCccCcEEEEcHHHH-------HHhCHHHHHHHHHCCCcEEEEeecc-ccHHHHHHHHH
Confidence 79999999999999999999998 899 999996 89999999999998 7889999999 88984 999
Q ss_pred HHHhcCCCEEEEccCCccccc-HHHHHHHHHHcCC-cE-EEEEcCCCCh--HHHHHh---hhhcceEEEEee-cCCCCCC
Q 025927 133 DFIKAGADIVSVHCEQSSTIH-LHRTLNQIKDLGA-KA-GVVLNPATSL--SAIECV---LDVVDLVLIMSV-NPGFGGQ 203 (246)
Q Consensus 133 ~~~~agad~It~H~E~~~~~~-~~~~i~~Ik~~G~-k~-GlAlnP~Tpv--e~l~~~---l~~vD~VLvMsV-~PGfgGQ 203 (246)
.+.++|+|+||+|+|+ ..+ +.++++.+|+.|+ ++ ++++++.|+. +.++++ ++..|+|+.|++ +||||+|
T Consensus 87 ~~~~~Gad~vTvH~~~--g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~ 164 (245)
T 1eix_A 87 AAADLGVWMVNVHASG--GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLD 164 (245)
T ss_dssp HHHHHTCSEEEEBGGG--CHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCS
T ss_pred HHHhCCCCEEEEeccC--CHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999999996 445 7899999999998 77 5667766665 888887 578899999999 8999999
Q ss_pred cccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChh-----------hhhhcc
Q 025927 204 SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVP 244 (246)
Q Consensus 204 ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~l~ 244 (246)
.|++..++ ++++|+.+.. ..|+|||||+.+ |+++++
T Consensus 165 g~V~~~~e-i~~lr~~~~~----~~i~v~gGI~~~g~~~~dq~rv~t~~~a~ 211 (245)
T 1eix_A 165 GVVCSAQE-AVRFKQVFGQ----EFKLVTPGIRPQGSEAGDQRRIMTPEQAL 211 (245)
T ss_dssp EEECCGGG-HHHHHHHHCS----SSEEEECCBCCTTCCCTTCCSCBCHHHHH
T ss_pred eEEeCHHH-HHHHHHhcCC----CCEEEECCcCCCCCCccchhccCCHHHHH
Confidence 99999998 9999988742 369999999999 877664
No 15
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.95 E-value=8.4e-30 Score=225.39 Aligned_cols=163 Identities=18% Similarity=0.249 Sum_probs=146.0
Q ss_pred eeeecccChhhHHHHHHHHHHcC--CCE--EEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCccc---chH
Q 025927 61 SPSILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQ---RVP 132 (246)
Q Consensus 61 sPSIl~aD~~~l~~~i~~l~~~g--~d~--lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~---~i~ 132 (246)
+||++++|+.+++++++.+++.| ++| +|+|+| ++|||+.|++||+. +.+++|+||| ..|.. |++
T Consensus 5 ~~lilalD~~~l~~~~~~v~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~lr~~~~~v~lD~kl~-Dip~t~~~~~~ 76 (246)
T 2yyu_A 5 TPFIVALDFPSKQEVERFLRPFAGTPLFVKVGMELY-------YQEGPAIVAFLKEQGHAVFLDLKLH-DIPNTVKQAMK 76 (246)
T ss_dssp CCEEEECCCSSHHHHHHHHGGGTTSCCEEEECHHHH-------HHHTHHHHHHHHHTTCEEEEEEEEC-SCHHHHHHHHH
T ss_pred CCeEEEeCCCCHHHHHHHHHHhcccccEEEeCHHHH-------HHhCHHHHHHHHHCCCeEEEEeecc-cchHHHHHHHH
Confidence 58999999999999999999988 699 999996 89999999999998 6789999999 89988 999
Q ss_pred HHHhcCCCEEEEccCCccccc-HHHHHHHHHH---cCCcE--EEEEcCCCCh--HHH-HHh---hhhcceEEEEeec-CC
Q 025927 133 DFIKAGADIVSVHCEQSSTIH-LHRTLNQIKD---LGAKA--GVVLNPATSL--SAI-ECV---LDVVDLVLIMSVN-PG 199 (246)
Q Consensus 133 ~~~~agad~It~H~E~~~~~~-~~~~i~~Ik~---~G~k~--GlAlnP~Tpv--e~l-~~~---l~~vD~VLvMsV~-PG 199 (246)
.+.++|+|+||+|+|+ ..+ +.++++.+|+ .|++. +++++|.||. +.+ +++ ++..|+|+.|+++ ||
T Consensus 77 ~~~~~Gad~vTvH~~~--g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~ 154 (246)
T 2yyu_A 77 GLARVGADLVNVHAAG--GRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKE 154 (246)
T ss_dssp HHHHTTCSEEEEEGGG--CHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCC--CHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999996 445 5889999999 79763 6999999996 888 776 6778999999997 99
Q ss_pred CCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChh
Q 025927 200 FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK 238 (246)
Q Consensus 200 fgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e 238 (246)
||+|.|++..++ ++++|+++. ..+ |+|||||+.+
T Consensus 155 ~G~~g~V~~~~e-i~~lr~~~~---~~~-i~V~gGI~~~ 188 (246)
T 2yyu_A 155 SGLDGVVCSANE-AAFIKERCG---ASF-LAVTPGIRFA 188 (246)
T ss_dssp HTCCEEECCHHH-HHHHHHHHC---TTS-EEEECCCCCC
T ss_pred hCCCEEEeCHHH-HHHHHHhcC---CCC-EEEeCCcCCC
Confidence 999999999998 999998873 345 9999999999
No 16
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.93 E-value=2.4e-28 Score=214.96 Aligned_cols=164 Identities=18% Similarity=0.293 Sum_probs=141.5
Q ss_pred eeecccChhhHHHHHHHHHHcC--CCE--EEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCcc---cchHH
Q 025927 62 PSILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPE---QRVPD 133 (246)
Q Consensus 62 PSIl~aD~~~l~~~i~~l~~~g--~d~--lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~---~~i~~ 133 (246)
+-++++|+.+++++++.+++.| ++| +|+|+| ++|||+.+++||+. +.+++|+||| ..|. .|++.
T Consensus 5 ~lilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~l~~~~~~v~lD~kl~-Dip~t~~~~~~~ 76 (239)
T 1dbt_A 5 LPIIALDFASAEETLAFLAPFQQEPLFVKVGMELF-------YQEGPSIVKQLKERNCELFLDLKLH-DIPTTVNKAMKR 76 (239)
T ss_dssp SCEEECCCSSHHHHHHHTGGGTTSCCEEEECHHHH-------HHHTHHHHHHHHHTTCEEEEEEEEC-SCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHhcccCcEEEECHHHH-------HHhCHHHHHHHHHCCCcEEEEeccc-cchHHHHHHHHH
Confidence 4689999999999999999888 699 999996 89999999999998 6789999999 8898 49999
Q ss_pred HHhcCCCEEEEccCCccccc-HHHHHHHHHHc---CCc-E-EEEEcCCCCh--HHH-HHh-h--hhcceEEEEeec-CCC
Q 025927 134 FIKAGADIVSVHCEQSSTIH-LHRTLNQIKDL---GAK-A-GVVLNPATSL--SAI-ECV-L--DVVDLVLIMSVN-PGF 200 (246)
Q Consensus 134 ~~~agad~It~H~E~~~~~~-~~~~i~~Ik~~---G~k-~-GlAlnP~Tpv--e~l-~~~-l--~~vD~VLvMsV~-PGf 200 (246)
+.++|||+||+|+|+ ..+ +.++++.+|+. |++ + |+++++.|+. +.+ +++ + +..|+|+.|+++ |||
T Consensus 77 ~~~~Gad~vtvH~~~--g~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~ 154 (239)
T 1dbt_A 77 LASLGVDLVNVHAAG--GKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEES 154 (239)
T ss_dssp HHTTTCSEEEEEGGG--CHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHT
T ss_pred HHhcCCCEEEEeCcC--CHHHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHh
Confidence 999999999999996 345 57899999999 987 3 5665555544 788 776 6 668999999997 999
Q ss_pred CCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChhhh
Q 025927 201 GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNA 240 (246)
Q Consensus 201 gGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i 240 (246)
|+|.|++.. +|++++|+.+ + +..|+|||||+.+++
T Consensus 155 G~~g~v~~~-~~i~~lr~~~---~-~~~i~v~gGI~~~~~ 189 (239)
T 1dbt_A 155 GLDGVVCSV-HEAKAIYQAV---S-PSFLTVTPGIRMSED 189 (239)
T ss_dssp TCSEEECCG-GGHHHHTTTS---C-TTCEEEECCBCCTTS
T ss_pred CCCEEEECH-HHHHHHHHhc---C-CCcEEEeCCcCCCCC
Confidence 999999998 8898888765 2 236999999999988
No 17
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.93 E-value=3e-26 Score=204.71 Aligned_cols=178 Identities=13% Similarity=0.091 Sum_probs=158.2
Q ss_pred CCcEEeeeecccCh--hhHHHHHHHHHHcCCCEEEeee------ccCcccCC-----------CCCCHHHHhhcccC-CC
Q 025927 56 SDIIVSPSILSANF--AKLGEQVKAVELAGCDWIHVDV------MDGRFVPN-----------ITIGPLVVDALRPV-TD 115 (246)
Q Consensus 56 ~~~~IsPSIl~aD~--~~l~~~i~~l~~~g~d~lHiDI------MDG~FVpN-----------~tfgp~~I~~ir~~-t~ 115 (246)
++..+.|+|+++|+ .+..+.++.|+++|+|+||+|+ |||+|++| +.++++.++++|+. ++
T Consensus 15 ~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~ 94 (268)
T 1qop_A 15 REGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT 94 (268)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS
T ss_pred CCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 46689999999999 7888999999999999999999 99999997 66788999999987 78
Q ss_pred CCeeEEEec-cCc------ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhc
Q 025927 116 LPLDVHLMI-VEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV 188 (246)
Q Consensus 116 ~plDvHLMV-~~P------~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~v 188 (246)
+| +|+|+ .|| ++|++.+.++|+|.+++|-+. .++..++++.+|++|++.+..++|.|+.+.++.+....
T Consensus 95 ~P--v~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~--~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~ 170 (268)
T 1qop_A 95 IP--IGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP--VEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYG 170 (268)
T ss_dssp SC--EEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC--GGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHC
T ss_pred CC--EEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC--HHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhC
Confidence 88 89998 578 789999999999999999885 45678999999999999999999999999999998887
Q ss_pred c-eEEEEeecCCCCCC--cccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhc
Q 025927 189 D-LVLIMSVNPGFGGQ--SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (246)
Q Consensus 189 D-~VLvMsV~PGfgGQ--~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l 243 (246)
+ +|++|++. |++|| +|.+...++|+++|+.. +..|.|||||+ .++++++
T Consensus 171 ~g~v~~~s~~-G~tG~~~~~~~~~~~~i~~lr~~~-----~~pi~vggGI~t~e~~~~~ 223 (268)
T 1qop_A 171 RGYTYLLSRS-GVTGAENRGALPLHHLIEKLKEYH-----AAPALQGFGISSPEQVSAA 223 (268)
T ss_dssp CSCEEEESSS-SCCCSSSCC--CCHHHHHHHHHTT-----CCCEEEESSCCSHHHHHHH
T ss_pred CCcEEEEecC-CcCCCccCCCchHHHHHHHHHhcc-----CCcEEEECCCCCHHHHHHH
Confidence 7 89999998 99999 79999999999998864 35699999998 8999884
No 18
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.93 E-value=1.2e-26 Score=197.69 Aligned_cols=169 Identities=17% Similarity=0.216 Sum_probs=149.3
Q ss_pred ecccChhhHHHHHHHHHHcCCCEEEeee-ccCcccCC-CCCCHHHHhhcccC-CCCCeeEEEeccCcccc-hHHHHhcCC
Q 025927 64 ILSANFAKLGEQVKAVELAGCDWIHVDV-MDGRFVPN-ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQR-VPDFIKAGA 139 (246)
Q Consensus 64 Il~aD~~~l~~~i~~l~~~g~d~lHiDI-MDG~FVpN-~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~-i~~~~~aga 139 (246)
++|+|+.++++.++.+++.+ + |+|+ |||+ || +++|++.|+++|+. ++.|+++|+|+.+|.++ ++.+.++|+
T Consensus 4 i~a~D~~~~~~~~~~~~~~~-~--~~diie~G~--p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Ga 78 (211)
T 3f4w_A 4 QLALDELTLPEAMVFMDKVV-D--DVDIIEVGT--PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGA 78 (211)
T ss_dssp EEEECSCCHHHHHHHHHHHG-G--GCSEEEECH--HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTC
T ss_pred EEEeCCCCHHHHHHHHHHhh-c--CccEEEeCc--HHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCC
Confidence 68999999999999999885 5 9999 9998 88 89999999999986 78999999999998877 999999999
Q ss_pred CEEEEccCCcccccHHHHHHHHHHcCCcEEEE-EcCCCChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHHHHHHHH
Q 025927 140 DIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVV-LNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLR 217 (246)
Q Consensus 140 d~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlA-lnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr 217 (246)
|.|++|.++. .+++.++++.+|++|+++++. ++|.|+.+.++.+++. +|+| .++|||+||.|.+..+++++++|
T Consensus 79 d~v~v~~~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i---~v~~g~~g~~~~~~~~~~i~~l~ 154 (211)
T 3f4w_A 79 DYVTVLGVTD-VLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADML---AVHTGTDQQAAGRKPIDDLITML 154 (211)
T ss_dssp SEEEEETTSC-HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEE---EEECCHHHHHTTCCSHHHHHHHH
T ss_pred CEEEEeCCCC-hhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEE---EEcCCCcccccCCCCHHHHHHHH
Confidence 9999999952 356789999999999999996 7899999999998887 9985 56799999999877888998888
Q ss_pred HHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 218 RMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 218 ~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+.+. +..|.++|||+.+|++++.+
T Consensus 155 ~~~~----~~~i~~~gGI~~~~~~~~~~ 178 (211)
T 3f4w_A 155 KVRR----KARIAVAGGISSQTVKDYAL 178 (211)
T ss_dssp HHCS----SCEEEEESSCCTTTHHHHHT
T ss_pred HHcC----CCcEEEECCCCHHHHHHHHH
Confidence 8753 36799999999999988764
No 19
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.92 E-value=1.7e-25 Score=189.98 Aligned_cols=166 Identities=14% Similarity=0.102 Sum_probs=137.1
Q ss_pred eecccChhhHHHHHHHHHHc--CCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccC-cccchHHHHhcC
Q 025927 63 SILSANFAKLGEQVKAVELA--GCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVE-PEQRVPDFIKAG 138 (246)
Q Consensus 63 SIl~aD~~~l~~~i~~l~~~--g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~-P~~~i~~~~~ag 138 (246)
-++++|+.++++.++.+++. |++|+|+ ||++| +++|++.|++||+.+ +.|+++|||+.| |.+|++.+.++|
T Consensus 3 li~a~d~~~~~~~~~~~~~~~~~v~~iev--~~~~~---~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~G 77 (207)
T 3ajx_A 3 LQVAIDLLSTEAALELAGKVAEYVDIIEL--GTPLI---KAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAG 77 (207)
T ss_dssp EEEEECCSCHHHHHHHHHHHGGGCSEEEE--CHHHH---HHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTT
T ss_pred EEEEeCCCCHHHHHHHHHHhhccCCEEEE--CcHHH---HhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCC
Confidence 46889999999888877755 4588665 99886 789999999999976 899999999999 899999999999
Q ss_pred CCEEEEccCCcccccHHHHHHHHHHcCCcEEEEE----cCCCChHHHHHhhhhcceE-EEEeecCCCCCCcccHHHHHHH
Q 025927 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL----NPATSLSAIECVLDVVDLV-LIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 139 ad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAl----nP~Tpve~l~~~l~~vD~V-LvMsV~PGfgGQ~F~~~~l~KI 213 (246)
+|.|++|.+.. ...+.++++.+++.|+++|+++ +|.++++.+.++ .+|+| +.|++.|+|.||+|.+ ++|
T Consensus 78 ad~v~vh~~~~-~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~--g~d~v~~~~~~~~~~~g~~~~~---~~i 151 (207)
T 3ajx_A 78 ADLVTVLGSAD-DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRAL--GAKFVEMHAGLDEQAKPGFDLN---GLL 151 (207)
T ss_dssp CSEEEEETTSC-HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHT--TCSEEEEECCHHHHTSTTCCTH---HHH
T ss_pred CCEEEEeccCC-hHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHh--CCCEEEEEecccccccCCCchH---HHH
Confidence 99999999962 2467788999999999999977 344444444443 48999 9999999999999887 777
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+++++. +..|.++|||+.+|++++.+
T Consensus 152 ~~~~~~------~~pi~v~GGI~~~~~~~~~~ 177 (207)
T 3ajx_A 152 AAGEKA------RVPFSVAGGVKVATIPAVQK 177 (207)
T ss_dssp HHHHHH------TSCEEEESSCCGGGHHHHHH
T ss_pred HHhhCC------CCCEEEECCcCHHHHHHHHH
Confidence 777654 35699999999999988653
No 20
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.90 E-value=2.5e-23 Score=183.96 Aligned_cols=180 Identities=17% Similarity=0.271 Sum_probs=155.3
Q ss_pred CCcEEeeeecccCh--hhHHHHHHHHHHcCCCEEEee------eccCcccC-----------CCCCCHHHHhhcccCCCC
Q 025927 56 SDIIVSPSILSANF--AKLGEQVKAVELAGCDWIHVD------VMDGRFVP-----------NITIGPLVVDALRPVTDL 116 (246)
Q Consensus 56 ~~~~IsPSIl~aD~--~~l~~~i~~l~~~g~d~lHiD------IMDG~FVp-----------N~tfgp~~I~~ir~~t~~ 116 (246)
++..+.|+++++|+ .+..+.++.++++|+|+||+| +|||+|++ ++..+.+.++++|+.+++
T Consensus 16 ~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~ 95 (262)
T 1rd5_A 16 GKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSC 95 (262)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSS
T ss_pred CCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 45678999999999 778899999999999999999 79999998 566678899999998888
Q ss_pred CeeEEEec-cCccc--chHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcc-eEE
Q 025927 117 PLDVHLMI-VEPEQ--RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVD-LVL 192 (246)
Q Consensus 117 plDvHLMV-~~P~~--~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD-~VL 192 (246)
| +|+|+ .||.. .++.+.++|+|.+++|-+. ..+..++++.+|++|++..+.++|.|+.+.++.+....+ +|.
T Consensus 96 P--v~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~--~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~ 171 (262)
T 1rd5_A 96 P--VVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLP--YVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVY 171 (262)
T ss_dssp C--EEEECCSHHHHSCCTHHHHHTTCCEEECTTCB--TTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEE
T ss_pred C--EEEEecCcHHHHHHHHHHHHcCCCEEEEcCCC--hhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEE
Confidence 8 78896 45642 5667899999999999774 457889999999999999999999999999988876655 899
Q ss_pred EEeecCCCCCC--cccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhccc
Q 025927 193 IMSVNPGFGGQ--SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVPN 245 (246)
Q Consensus 193 vMsV~PGfgGQ--~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~~ 245 (246)
+|++ +|++|| .+.+..+++++++|+.. +..|.++|||+ .+|++++.+
T Consensus 172 ~~s~-~G~tG~~~~~~~~~~~~i~~v~~~~-----~~pI~vgGGI~~~e~~~~~~~ 221 (262)
T 1rd5_A 172 LVSV-NGVTGPRANVNPRVESLIQEVKKVT-----NKPVAVGFGISKPEHVKQIAQ 221 (262)
T ss_dssp EECS-SCCBCTTSCBCTHHHHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHHH
T ss_pred EecC-CCCCCCCcCCCchHHHHHHHHHhhc-----CCeEEEECCcCCHHHHHHHHH
Confidence 9998 999999 78899999999998874 35799999999 999988753
No 21
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.89 E-value=1.5e-23 Score=183.20 Aligned_cols=172 Identities=14% Similarity=0.191 Sum_probs=142.1
Q ss_pred eecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC---CCCCeeEEEeccCcccchHHHHhcCC
Q 025927 63 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFIKAGA 139 (246)
Q Consensus 63 SIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~---t~~plDvHLMV~~P~~~i~~~~~aga 139 (246)
=++++|+.++++.++.+++.|-...|++||++.| ++|||+.|++||+. +.+++|+||| ..|..+.+.+.++|+
T Consensus 8 livAlD~~~~~~a~~~~~~~~~~~~~ikvg~~lf---~~~G~~~v~~l~~~~p~~~iflDlKl~-Dip~t~~~~~~~~Ga 83 (221)
T 3exr_A 8 LQVALDHSNLKGAITAAVSVGNEVDVIEAGTVCL---LQVGSELVEVLRSLFPDKIIVADTKCA-DAGGTVAKNNAVRGA 83 (221)
T ss_dssp EEEEECCSSHHHHHHHHHHHGGGCSEEEECHHHH---HHHCTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHTTTC
T ss_pred EEEEeCCCCHHHHHHHHHhhCCCceEEEECHHHH---HhcCHHHHHHHHHhCCCCcEEEEEEee-ccHHHHHHHHHHcCC
Confidence 3789999999999999999884444555699999 78999999999885 4579999999 999999999999999
Q ss_pred CEEEEccCCcccccHHHHHHHHHHcC---CcEEEEEcCCCChHHHHHhhh-hcc-eEEEEeecCCCCCCcccHHHHHHHH
Q 025927 140 DIVSVHCEQSSTIHLHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVD-LVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 140 d~It~H~E~~~~~~~~~~i~~Ik~~G---~k~GlAlnP~Tpve~l~~~l~-~vD-~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
|++|+|.++. ...+.++++.+++.| .++|++++|.||.+.++++++ .+| .|+-|++.+++.|+.-- .++++
T Consensus 84 d~vtVH~~~g-~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s---~~e~~ 159 (221)
T 3exr_A 84 DWMTCICSAT-IPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALLAGETWG---EKDLN 159 (221)
T ss_dssp SEEEEETTSC-HHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCC---HHHHH
T ss_pred CEEEEeccCC-HHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcCCCccccC---HHHHH
Confidence 9999999962 334788999999988 899999999999999988876 564 46668888888887533 44555
Q ss_pred HHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 215 DLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
.+|+.+ +.++.|+|||||+.+|++++.+
T Consensus 160 ~ir~~~---~~~~~i~v~gGI~~~~~~~~~~ 187 (221)
T 3exr_A 160 KVKKLI---EMGFRVSVTGGLSVDTLKLFEG 187 (221)
T ss_dssp HHHHHH---HHTCEEEEESSCCGGGGGGGTT
T ss_pred HHHHhh---cCCceEEEECCCCHHHHHHHHH
Confidence 556654 3357899999999999988764
No 22
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.86 E-value=6.5e-22 Score=172.03 Aligned_cols=162 Identities=13% Similarity=0.159 Sum_probs=133.8
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~ 150 (246)
+..+.++.++++|+|++|++.|||+|+++..+ +.++++++.+++|+++|.|+.+|++ ++.+.++|||.|++|.|+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggI~~~~~-~~~~l~~Gad~V~lg~~~-- 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMDIKVELSGGIRDDDT-LAAALATGCTRVNLGTAA-- 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCSSEEEEESSCCSHHH-HHHHHHTTCSEEEECHHH--
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcCCcEEEECCcCCHHH-HHHHHHcCCCEEEECchH--
Confidence 34455678888999999999999999999888 8899999988999999999999997 889999999999999995
Q ss_pred cccHHHHHHHHHHcCCcEEEEEcCC--------------CChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 151 TIHLHRTLNQIKDLGAKAGVVLNPA--------------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 151 ~~~~~~~i~~Ik~~G~k~GlAlnP~--------------Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
..++..+.+.+++.|.++++++++. |+++.++.+.+. +|.|++|++.|++.+|.+..+.++++++
T Consensus 108 l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~ 187 (244)
T 1vzw_A 108 LETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCA 187 (244)
T ss_dssp HHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHH
T ss_pred hhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHH
Confidence 4567788888899998999999987 778888888877 9999999999999999998887777763
Q ss_pred HHHHHHhcCCCCeEEEeCCCCh-hhhhhccc
Q 025927 216 LRRMCLEKGVNPWIEVDGGVGP-KNAYKVPN 245 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~~ 245 (246)
. .++.|.++|||+. ++++++.+
T Consensus 188 ------~--~~ipvia~GGI~~~~d~~~~~~ 210 (244)
T 1vzw_A 188 ------A--TDRPVVASGGVSSLDDLRAIAG 210 (244)
T ss_dssp ------T--CSSCEEEESCCCSHHHHHHHHT
T ss_pred ------h--cCCCEEEECCCCCHHHHHHHHh
Confidence 1 2467999999996 99988765
No 23
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.85 E-value=3.4e-21 Score=173.43 Aligned_cols=178 Identities=15% Similarity=0.158 Sum_probs=152.1
Q ss_pred CCcEEeeeecccCh--hhHHHHHHHHHHcCCCEEEee------eccCcccCCCC-----CC------HHHHhhcccC-CC
Q 025927 56 SDIIVSPSILSANF--AKLGEQVKAVELAGCDWIHVD------VMDGRFVPNIT-----IG------PLVVDALRPV-TD 115 (246)
Q Consensus 56 ~~~~IsPSIl~aD~--~~l~~~i~~l~~~g~d~lHiD------IMDG~FVpN~t-----fg------p~~I~~ir~~-t~ 115 (246)
++..+.|+++++|+ ....+.++.|+++|+|+||++ +|||.++.+.+ .| .++++++|+. ++
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~ 95 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPD 95 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 46789999999999 888999999999999999999 99999999865 66 7899999985 77
Q ss_pred CCeeEEEecc-Cc------ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhc
Q 025927 116 LPLDVHLMIV-EP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV 188 (246)
Q Consensus 116 ~plDvHLMV~-~P------~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~v 188 (246)
.| +|||++ || ++|++.++++|+|.+.+|-.. .++..++++.++++|++....++|.|+.+.++.+....
T Consensus 96 ~P--ivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp--~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~ 171 (267)
T 3vnd_A 96 MP--IGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVP--VEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQG 171 (267)
T ss_dssp CC--EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSC--GGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHC
T ss_pred CC--EEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCC--HhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhC
Confidence 77 899998 88 889999999999999999775 45678899999999999999999999999999999988
Q ss_pred c-eEEEEeecCCCCCCc-ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhh
Q 025927 189 D-LVLIMSVNPGFGGQS-FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYK 242 (246)
Q Consensus 189 D-~VLvMsV~PGfgGQ~-F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~ 242 (246)
+ +|.+||+.+..|++. +.+...++++++|+.. +..+.|+|||+ .+++++
T Consensus 172 ~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-----~~pv~vGfGI~~~e~~~~ 223 (267)
T 3vnd_A 172 EGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-----APPPLLGFGIAEPEQVRA 223 (267)
T ss_dssp CSCEEESCCCCCC--------CHHHHHHHHHTTT-----CCCEEECSSCCSHHHHHH
T ss_pred CCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-----CCCEEEECCcCCHHHHHH
Confidence 5 999999999888886 8888889999888763 35699999995 888873
No 24
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.83 E-value=1.2e-20 Score=163.61 Aligned_cols=161 Identities=13% Similarity=0.145 Sum_probs=137.8
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccc
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSST 151 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~ 151 (246)
..+..+.++++|+|++|++.|||+|+++..+ +.++++++.+++|+++|.|+.+|++ ++.+.++|||.|++|.|. .
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggi~~~~~-~~~~l~~Gad~V~lg~~~--l 107 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKLDVQVELSGGIRDDES-LAAALATGCARVNVGTAA--L 107 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHCSSEEEEESSCCSHHH-HHHHHHTTCSEEEECHHH--H
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhcCCcEEEECCCCCHHH-HHHHHHcCCCEEEECchH--h
Confidence 4455667889999999999999999999888 8999999988999999999999996 889999999999999995 4
Q ss_pred ccHHHHHHHHHHcCCcEEEEEcCC------------------CChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHHH
Q 025927 152 IHLHRTLNQIKDLGAKAGVVLNPA------------------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKK 212 (246)
Q Consensus 152 ~~~~~~i~~Ik~~G~k~GlAlnP~------------------Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~K 212 (246)
.++..+.+.+++.|.++++++++. |+++.++.+.+. +|.|+++++++++.+|.+..+.+++
T Consensus 108 ~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~ 187 (244)
T 2y88_A 108 ENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAG 187 (244)
T ss_dssp HCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHH
T ss_pred hChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHH
Confidence 567778888888898888888876 668888888777 9999999999998888887777766
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhccc
Q 025927 213 ISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVPN 245 (246)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~~ 245 (246)
+++ ..++.|.++|||+. +++.++.+
T Consensus 188 l~~--------~~~ipvia~GGI~~~~d~~~~~~ 213 (244)
T 2y88_A 188 VAD--------RTDAPVIASGGVSSLDDLRAIAT 213 (244)
T ss_dssp HHT--------TCSSCEEEESCCCSHHHHHHHHT
T ss_pred HHH--------hCCCCEEEECCCCCHHHHHHHHh
Confidence 652 13567999999996 99988764
No 25
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=99.68 E-value=1e-17 Score=147.03 Aligned_cols=164 Identities=19% Similarity=0.265 Sum_probs=122.9
Q ss_pred eecccChhhHHHHHHHHHHcC--CCEEEeeeccCcccCCCCCCHHHHhhcccC--CCCCeeEEEeccCccc---chHHHH
Q 025927 63 SILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFI 135 (246)
Q Consensus 63 SIl~aD~~~l~~~i~~l~~~g--~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~--t~~plDvHLMV~~P~~---~i~~~~ 135 (246)
=++++|+.++++.++.+++.+ ++|+|+ +++.| ++|||+.+++||+. +.+++|+||| .-|.. |++.+.
T Consensus 15 lilAlD~~~~~~a~~~v~~~~~~v~~~Kv--g~~lf---~~~G~~~v~~l~~~~g~~v~lD~Kl~-DipnTv~~~~~~~~ 88 (228)
T 3m47_A 15 LILAMDLMNRDDALRVTGEVREYIDTVKI--GYPLV---LSEGMDIIAEFRKRFGCRIIADFKVA-DIPETNEKICRATF 88 (228)
T ss_dssp EEEECCCCSHHHHHHHHHTTTTTCSEEEE--EHHHH---HHHCTHHHHHHHHHHCCEEEEEEEEC-SCHHHHHHHHHHHH
T ss_pred eEEEeCCCCHHHHHHHHHHcCCcccEEEE--cHHHH---HhcCHHHHHHHHhcCCCeEEEEEeec-ccHhHHHHHHHHHH
Confidence 378899999999999999887 899999 55888 78999999999984 6789999999 66555 999999
Q ss_pred hcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 136 ~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
++|+|++|+|.|.. ...+..+++.+++.|.++ .+|.+-|+.+..+.+.+.++.+..|++++|+.|.-.-....+.+++
T Consensus 89 ~~gad~vtvh~~~G-~~~l~~~~~~~~~~g~~v-~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~~~e~~~ 166 (228)
T 3m47_A 89 KAGADAIIVHGFPG-ADSVRACLNVAEEMGREV-FLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSR 166 (228)
T ss_dssp HTTCSEEEEESTTC-HHHHHHHHHHHHHHTCEE-EEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSCHHHHHH
T ss_pred hCCCCEEEEeccCC-HHHHHHHHHHHHhcCCCe-EEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHH
Confidence 99999999999962 344778888898888643 3457777765433334566777889999999885544322344555
Q ss_pred HHHHHHhcCCCCeEEEeCCCChh
Q 025927 216 LRRMCLEKGVNPWIEVDGGVGPK 238 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e 238 (246)
+|+.. +.++.| |++||+.+
T Consensus 167 ir~~~---~~~~~i-v~PGI~~~ 185 (228)
T 3m47_A 167 LREII---GQDSFL-ISPGVGAQ 185 (228)
T ss_dssp HHHHH---CSSSEE-EECC----
T ss_pred HHHhc---CCCCEE-EecCcCcC
Confidence 55544 444667 99999887
No 26
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.66 E-value=1.1e-15 Score=130.66 Aligned_cols=171 Identities=16% Similarity=0.165 Sum_probs=128.7
Q ss_pred CcEEeeeeccc----ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCe---------eEEEe
Q 025927 57 DIIVSPSILSA----NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL---------DVHLM 123 (246)
Q Consensus 57 ~~~IsPSIl~a----D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~pl---------DvHLM 123 (246)
..++|--.... +.....+..+.++++|++++|+| +++.++++|+.++.|+ +.|+|
T Consensus 6 ~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~ 73 (223)
T 1y0e_A 6 GLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN------------TKEDILAIKETVDLPVIGIVKRDYDHSDVF 73 (223)
T ss_dssp EEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHHHCCSCEEEECBCCCTTCCCC
T ss_pred CeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC------------CHHHHHHHHHhcCCCEEeeeccCCCccccc
Confidence 34444444444 55567788899999999999986 6889999999999998 67999
Q ss_pred ccCcccchHHHHhcCCCEEEEccCCccc--ccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCC
Q 025927 124 IVEPEQRVPDFIKAGADIVSVHCEQSST--IHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPG 199 (246)
Q Consensus 124 V~~P~~~i~~~~~agad~It~H~E~~~~--~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PG 199 (246)
+.++..+++.+.++|+|.|++|.++... ..+.++++.+|+. |+.+++ ++.|+.+...-.-.-+|+ +|..++|
T Consensus 74 i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~--~~~t~~e~~~~~~~G~d~--i~~~~~g 149 (223)
T 1y0e_A 74 ITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMA--DIATVEEAKNAARLGFDY--IGTTLHG 149 (223)
T ss_dssp BSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHHHTTCSE--EECTTTT
T ss_pred cCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEe--cCCCHHHHHHHHHcCCCE--EEeCCCc
Confidence 9999999999999999999999996321 2567899999999 988875 666766544322223666 5778889
Q ss_pred CCCCcccHH-HHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhhhhhccc
Q 025927 200 FGGQSFIES-QVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVPN 245 (246)
Q Consensus 200 fgGQ~F~~~-~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~~ 245 (246)
|.+|++... ...+++.++++.+.. ++.+.++||| +.+++.++.+
T Consensus 150 ~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~~ 195 (223)
T 1y0e_A 150 YTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVMD 195 (223)
T ss_dssp SSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHHH
T ss_pred CcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHHH
Confidence 998887432 333455555555443 5789999999 9999988754
No 27
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.66 E-value=3e-16 Score=134.74 Aligned_cols=159 Identities=14% Similarity=0.124 Sum_probs=115.0
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCC--HHHHhhcccCCCCCeeEEEeccCcccchHHHH
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG--PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFI 135 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg--p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~ 135 (246)
+.|+||.+++| ++++ ++.+.+.|++++|+|.|| ++++ .+.++++++.+ .+.+ |+|+. .+++.+.
T Consensus 20 ~~It~~~~~~~--~l~~-~~~~~~~G~~~v~lr~~~------~~~~~~~~~~~~l~~~~-~~~~-~l~v~---~~~~~a~ 85 (221)
T 1yad_A 20 HAITDDSKPVE--ELAR-IIITIQNEVDFIHIRERS------KSAADILKLLDLIFEGG-IDKR-KLVMN---GRVDIAL 85 (221)
T ss_dssp EEECCSCSCHH--HHHH-HHHHHGGGCSEEEECCTT------SCHHHHHHHHHHHHHTT-CCGG-GEEEE---SCHHHHH
T ss_pred EEEECCCcCcc--hHHH-HHHHHHCCCCEEEEccCC------CCHHHHHHHHHHHHHhc-CcCC-eEEEe---ChHHHHH
Confidence 56999999886 6644 888888999999999887 4455 67888888875 4677 99997 3678999
Q ss_pred hcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcc---cHHHHHH
Q 025927 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSF---IESQVKK 212 (246)
Q Consensus 136 ~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F---~~~~l~K 212 (246)
++|+|.|++|.+.. ..+.++.++. |+++|+.++ |+.+..+.....+|+|+++++ |++|.+ .+..+++
T Consensus 86 ~~gad~v~l~~~~~----~~~~~~~~~~-~~~ig~sv~--t~~~~~~a~~~gaD~i~~~~~---f~~~~~~g~~~~~~~~ 155 (221)
T 1yad_A 86 FSTIHRVQLPSGSF----SPKQIRARFP-HLHIGRSVH--SLEEAVQAEKEDADYVLFGHV---FETDCKKGLEGRGVSL 155 (221)
T ss_dssp TTTCCEEEECTTSC----CHHHHHHHCT-TCEEEEEEC--SHHHHHHHHHTTCSEEEEECC---C----------CHHHH
T ss_pred HcCCCEEEeCCCcc----CHHHHHHHCC-CCEEEEEcC--CHHHHHHHHhCCCCEEEECCc---cccCCCCCCCCCCHHH
Confidence 99999999998731 2344555554 899999874 554544444556999999987 444433 2455667
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 213 ISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++++++.. ++.+.++||||.+|+.++.+
T Consensus 156 l~~~~~~~-----~~pvia~GGI~~~nv~~~~~ 183 (221)
T 1yad_A 156 LSDIKQRI-----SIPVIAIGGMTPDRLRDVKQ 183 (221)
T ss_dssp HHHHHHHC-----CSCEEEESSCCGGGHHHHHH
T ss_pred HHHHHHhC-----CCCEEEECCCCHHHHHHHHH
Confidence 76665543 45799999999999998754
No 28
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.63 E-value=1.2e-15 Score=131.88 Aligned_cols=153 Identities=17% Similarity=0.262 Sum_probs=120.6
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCe---------eEEEeccCcccchHHHHhcCCCE
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL---------DVHLMIVEPEQRVPDFIKAGADI 141 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~pl---------DvHLMV~~P~~~i~~~~~agad~ 141 (246)
.+.+.++.++++|++++|+| +|+.++++|+.+++|+ +.|+|+.+|..+++.+.++|+|.
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~------------~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~ 104 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN------------SVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAV 104 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSE
T ss_pred hHHHHHHHHHHCCCcEeecC------------CHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCE
Confidence 67788899999999999997 6889999999999998 67999999999999999999999
Q ss_pred EEEccCCccc---ccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhhcceE--EEEeecCCCCCCcccHHHHHHHH
Q 025927 142 VSVHCEQSST---IHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDVVDLV--LIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 142 It~H~E~~~~---~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~vD~V--LvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
|.+|.+.... ..+.++++.+|+. ++. +.+++.|+.+....+..-+|+| ++|+++||+ |.+.+..++.++
T Consensus 105 V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~--v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~--~~~~~~~~~~i~ 180 (234)
T 1yxy_A 105 IAMDCTKRDRHDGLDIASFIRQVKEKYPNQL--LMADISTFDEGLVAHQAGIDFVGTTLSGYTPYS--RQEAGPDVALIE 180 (234)
T ss_dssp EEEECCSSCCTTCCCHHHHHHHHHHHCTTCE--EEEECSSHHHHHHHHHTTCSEEECTTTTSSTTS--CCSSSCCHHHHH
T ss_pred EEEcccccCCCCCccHHHHHHHHHHhCCCCe--EEEeCCCHHHHHHHHHcCCCEEeeeccccCCCC--cCCCCCCHHHHH
Confidence 9999996321 2467899999988 555 5557777766555555569999 899999865 334443344444
Q ss_pred HHHHHHHhcCCCCeEEEeCCCC-hhhhhhccc
Q 025927 215 DLRRMCLEKGVNPWIEVDGGVG-PKNAYKVPN 245 (246)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~~ 245 (246)
++ .+. ++.|.++|||+ .+++.++.+
T Consensus 181 ~~---~~~---~ipvia~GGI~s~~~~~~~~~ 206 (234)
T 1yxy_A 181 AL---CKA---GIAVIAEGKIHSPEEAKKIND 206 (234)
T ss_dssp HH---HHT---TCCEEEESCCCSHHHHHHHHT
T ss_pred HH---HhC---CCCEEEECCCCCHHHHHHHHH
Confidence 44 333 46799999999 999988764
No 29
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=99.59 E-value=1.1e-14 Score=132.46 Aligned_cols=156 Identities=18% Similarity=0.178 Sum_probs=128.6
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCccc--------------chHHHHhcCC
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQ--------------RVPDFIKAGA 139 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~--------------~i~~~~~aga 139 (246)
+.+...+++|+|+||++ |+.+++++|.++.+++.+++.++ ++||.|+..... .|+.+.++|+
T Consensus 50 ~~a~~A~~gGAdRIELc--~~l~~GGlTPS~g~i~~a~~~~~--ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GA 125 (287)
T 3iwp_A 50 ESAVNAERGGADRIELC--SGLSEGGTTPSMGVLQVVKQSVQ--IPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGA 125 (287)
T ss_dssp HHHHHHHHHTCSEEEEC--BCGGGTCBCCCHHHHHHHHTTCC--SCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCEEEEC--CCCCCCCCCCCHHHHHHHHHhcC--CCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCC
Confidence 34556678899999999 99999999999999999998765 679999975543 7889999999
Q ss_pred CEEEEcc---CCcccccHHHHHHHHHHcCCcEEEEEcCC-----CChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHH
Q 025927 140 DIVSVHC---EQSSTIHLHRTLNQIKDLGAKAGVVLNPA-----TSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQV 210 (246)
Q Consensus 140 d~It~H~---E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-----Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l 210 (246)
|.|.|++ |. ..|..++.+.|+..+. .|+++++. +|.+.++.+++ -+|.||- +|| .+.+.
T Consensus 126 dGvVfG~L~~dg--~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILT-------SG~--~~~a~ 193 (287)
T 3iwp_A 126 DGLVFGALTEDG--HIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLT-------SGC--DSSAL 193 (287)
T ss_dssp SEEEECCBCTTS--CBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEE-------CTT--SSSTT
T ss_pred CEEEEeeeCCCC--CcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEEC-------CCC--CCChH
Confidence 9999996 42 4677888888887775 79999999 78899999888 6898887 555 34456
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 211 KKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 211 ~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+++..|+++.+..+-.+.|.++||||.+|++++.+
T Consensus 194 ~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~ 228 (287)
T 3iwp_A 194 EGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILE 228 (287)
T ss_dssp TTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHHH
T ss_pred HhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHHH
Confidence 77777777777666578999999999999998753
No 30
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.58 E-value=5e-15 Score=128.74 Aligned_cols=162 Identities=15% Similarity=0.087 Sum_probs=128.8
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccc
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSST 151 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~ 151 (246)
..+..+.++++|+|++|++-+|+.|. +.....+.++++++.+++|+.+|.++.+|++ ++.+.++|||.|.+|.+. .
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~-~~~~~~~Gad~V~lg~~~--l 107 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQIDIPFTVGGGIHDFET-ASELILRGADKVSINTAA--V 107 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTTCCSCEEEESSCCSHHH-HHHHHHTTCSEEEESHHH--H
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHhCCCCEEEeCCCCCHHH-HHHHHHcCCCEEEEChHH--H
Confidence 33445777899999999999999885 5567788899999988999999999999877 888889999999999985 3
Q ss_pred ccHHHHHHHHHHcCC-cEEEEEcCC-------------------CChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHH
Q 025927 152 IHLHRTLNQIKDLGA-KAGVVLNPA-------------------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQV 210 (246)
Q Consensus 152 ~~~~~~i~~Ik~~G~-k~GlAlnP~-------------------Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l 210 (246)
.++..+.+.++..|. ++.+++++. ++++.++.+.+. +|.|+++++.++..+|.+..+.+
T Consensus 108 ~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~ 187 (253)
T 1thf_D 108 ENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMI 187 (253)
T ss_dssp HCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHH
T ss_pred hChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHH
Confidence 455566666777775 456777763 566777777776 89999999999988888877766
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhccc
Q 025927 211 KKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVPN 245 (246)
Q Consensus 211 ~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~~ 245 (246)
+++++ . .+..+.++|||+. +++.++.+
T Consensus 188 ~~l~~------~--~~ipvia~GGI~~~~d~~~~~~ 215 (253)
T 1thf_D 188 RFVRP------L--TTLPIIASGGAGKMEHFLEAFL 215 (253)
T ss_dssp HHHGG------G--CCSCEEEESCCCSHHHHHHHHH
T ss_pred HHHHH------h--cCCCEEEECCCCCHHHHHHHHH
Confidence 66542 1 2467999999995 99887753
No 31
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.57 E-value=6.2e-15 Score=126.26 Aligned_cols=164 Identities=15% Similarity=0.126 Sum_probs=128.3
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~ 149 (246)
.+..+.++.++++|+|++|++-||+.+ ++.....+.++++++.+++|+.+|.++.+|+.. +.+.++|||.|.+|.+.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~-~~~~~~Gad~V~i~~~~- 109 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDA-TTLFRAGADKVSVNTAA- 109 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHH-HHHHHHTCSEEEESHHH-
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHH-HHHHHcCCCEEEEChHH-
Confidence 356788899999999999999999987 555667888999998889999999999999875 78888999999999875
Q ss_pred ccccHHHHHHHHHHcCC---cEEEEEc--C---------------CCChHHHHHhhhh-cceEEEEeecCCCCCCcccHH
Q 025927 150 STIHLHRTLNQIKDLGA---KAGVVLN--P---------------ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIES 208 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~~G~---k~GlAln--P---------------~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~ 208 (246)
..++..+.+.+++.|. .+|+..+ | .|+++.++.+.+. +|+|+++++.|++.+|.+..+
T Consensus 110 -~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~ 188 (253)
T 1h5y_A 110 -VRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVE 188 (253)
T ss_dssp -HHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHH
T ss_pred -hhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHH
Confidence 3445556666677774 4666654 1 3567777777776 999999999998888888655
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhccc
Q 025927 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVPN 245 (246)
Q Consensus 209 ~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~~ 245 (246)
.+ +++++.. +..|.++|||+. +++.++.+
T Consensus 189 ~i---~~l~~~~-----~~pvia~GGi~~~~~~~~~~~ 218 (253)
T 1h5y_A 189 LI---RRVADSV-----RIPVIASGGAGRVEHFYEAAA 218 (253)
T ss_dssp HH---HHHHHHC-----SSCEEEESCCCSHHHHHHHHH
T ss_pred HH---HHHHHhc-----CCCEEEeCCCCCHHHHHHHHH
Confidence 54 4444432 457999999995 88887653
No 32
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.54 E-value=2.7e-14 Score=120.58 Aligned_cols=162 Identities=17% Similarity=0.131 Sum_probs=115.1
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCC--HHHHhhcccCCCCCeeEEEeccCcccchHHHH
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG--PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFI 135 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg--p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~ 135 (246)
+.|+|+. +. ++.+.++.+.++|++++|++. |+.++. .+.++.+++.+. ..++|+|+. .+++.+.
T Consensus 18 ~~It~~~-~~---~~~~~~~~~~~~G~~~i~l~~------~~~~~~~~~~~~~~l~~~~~-~~~v~v~v~---~~~~~a~ 83 (215)
T 1xi3_A 18 YVITDRR-LK---PEVESVREALEGGATAIQMRI------KNAPTREMYEIGKTLRQLTR-EYDALFFVD---DRVDVAL 83 (215)
T ss_dssp EEECCTT-TS---CHHHHHHHHHHTTCSEEEECC------CSCCHHHHHHHHHHHHHHHH-HTTCEEEEE---SCHHHHH
T ss_pred EEEECCc-hh---hHHHHHHHHHHCCCCEEEECC------CCCCHHHHHHHHHHHHHHHH-HcCCeEEEc---ChHHHHH
Confidence 5689988 65 788899999999999999995 444443 566666766543 467899995 5678899
Q ss_pred hcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 136 ~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
++|+|.|.++... ..+ +.++.++ .++.+|+.. .|+.+....+-..+|+|+++++.|+++++.+.+..++++++
T Consensus 84 ~~gad~v~l~~~~---~~~-~~~~~~~-~~~~~~v~~--~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~ 156 (215)
T 1xi3_A 84 AVDADGVQLGPED---MPI-EVAKEIA-PNLIIGASV--YSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRK 156 (215)
T ss_dssp HHTCSEEEECTTS---CCH-HHHHHHC-TTSEEEEEE--SSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHH
T ss_pred HcCCCEEEECCcc---CCH-HHHHHhC-CCCEEEEec--CCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHH
Confidence 9999999776432 122 3444444 577778765 55555443334469999999999987766666777777877
Q ss_pred HHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+++.. +..+.++|||+.+|++++.+
T Consensus 157 l~~~~-----~~pvia~GGI~~~nv~~~~~ 181 (215)
T 1xi3_A 157 IVESV-----KIPVVAIGGINKDNAREVLK 181 (215)
T ss_dssp HHHHC-----SSCEEEESSCCTTTHHHHHT
T ss_pred HHHhC-----CCCEEEECCcCHHHHHHHHH
Confidence 76653 45799999999999988754
No 33
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.48 E-value=2.9e-14 Score=121.37 Aligned_cols=157 Identities=17% Similarity=0.191 Sum_probs=113.0
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEec-----cCcccch
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMI-----VEPEQRV 131 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV-----~~P~~~i 131 (246)
+..|.|||++.|+.++.+.++.+.+.|++++|++.+|... .+.++.+++. +++|+|+ .+++ ++
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~-------~~~i~~i~~~----~~~~l~vg~g~~~~~~-~i 73 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQW-------EQSIPAIVDA----YGDKALIGAGTVLKPE-QV 73 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTH-------HHHHHHHHHH----HTTTSEEEEECCCSHH-HH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-------HHHHHHHHHh----CCCCeEEEeccccCHH-HH
Confidence 5678999999999999999999999999999999998422 2344544432 3456777 4554 68
Q ss_pred HHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHH
Q 025927 132 PDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVK 211 (246)
Q Consensus 132 ~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~ 211 (246)
+.+.++|+|.|. ... .+ .++++.+++.|.++-+. ..|+.+..+....-+|+|.+ .|+ + +..++
T Consensus 74 ~~a~~~Gad~V~--~~~---~~-~~~~~~~~~~g~~~~~g--~~t~~e~~~a~~~G~d~v~v---~~t---~---~~g~~ 136 (212)
T 2v82_A 74 DALARMGCQLIV--TPN---IH-SEVIRRAVGYGMTVCPG--CATATEAFTALEAGAQALKI---FPS---S---AFGPQ 136 (212)
T ss_dssp HHHHHTTCCEEE--CSS---CC-HHHHHHHHHTTCEEECE--ECSHHHHHHHHHTTCSEEEE---TTH---H---HHCHH
T ss_pred HHHHHcCCCEEE--eCC---CC-HHHHHHHHHcCCCEEee--cCCHHHHHHHHHCCCCEEEE---ecC---C---CCCHH
Confidence 999999999885 443 12 35678889999874322 46666665555556999985 442 2 33467
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 212 KISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 212 KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+++++++..+ .++.|.++|||+.+|++++.+
T Consensus 137 ~~~~l~~~~~---~~ipvia~GGI~~~~i~~~~~ 167 (212)
T 2v82_A 137 YIKALKAVLP---SDIAVFAVGGVTPENLAQWID 167 (212)
T ss_dssp HHHHHHTTSC---TTCEEEEESSCCTTTHHHHHH
T ss_pred HHHHHHHhcc---CCCeEEEeCCCCHHHHHHHHH
Confidence 7777666542 146899999999999988753
No 34
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.46 E-value=1.4e-13 Score=117.49 Aligned_cols=167 Identities=17% Similarity=0.095 Sum_probs=119.0
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCC--HHHHhhcccCCCCCeeEEEeccCcccchHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG--PLVVDALRPVTDLPLDVHLMIVEPEQRVPDF 134 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg--p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~ 134 (246)
-+.|+|+.++.|. +.+.++.+.++|+|++|++.+|+. +..++ .+.++.+++.+. ..++|+++. .+++.+
T Consensus 20 i~~It~~~~~~~~--~~~~~~~~~~~G~~~i~l~~~~~~---~~~~~~~~~~~~~l~~~~~-~~~v~v~v~---~~~~~a 90 (227)
T 2tps_A 20 VYFIMGSNNTKAD--PVTVVQKALKGGATLYQFREKGGD---ALTGEARIKFAEKAQAACR-EAGVPFIVN---DDVELA 90 (227)
T ss_dssp EEEEECGGGCSSC--HHHHHHHHHHHTCSEEEECCCSTT---CCCHHHHHHHHHHHHHHHH-HHTCCEEEE---SCHHHH
T ss_pred EEEEECCccccch--HHHHHHHHHHCCCCEEEEecCCCC---HhHHHHHHHHHHHHHHHHH-HcCCeEEEc---CHHHHH
Confidence 3579999998886 889999999999999999999874 45555 356666665543 467888885 467888
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHH-HcCC-cEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCc-ccHHHHH
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIK-DLGA-KAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQS-FIESQVK 211 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik-~~G~-k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~-F~~~~l~ 211 (246)
.++|+|.|.+-.+ ... +..++ ..|. .+|+ ++.|+.+....+-.-+|+|+++++.|+++++. +.+..++
T Consensus 91 ~~~gad~v~l~~~---~~~----~~~~~~~~g~~~~~~--s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~ 161 (227)
T 2tps_A 91 LNLKADGIHIGQE---DAN----AKEVRAAIGDMILGV--SAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVS 161 (227)
T ss_dssp HHHTCSEEEECTT---SSC----HHHHHHHHTTSEEEE--EECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTH
T ss_pred HHcCCCEEEECCC---ccC----HHHHHHhcCCcEEEE--ecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHH
Confidence 9999999976333 122 23333 3564 5554 46677664433444699999999999876655 5555667
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 212 KISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 212 KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+++++++..+ +..+.++|||+.+|+.++.+
T Consensus 162 ~l~~~~~~~~----~~pvia~GGI~~~nv~~~~~ 191 (227)
T 2tps_A 162 LIEAVRRQGI----SIPIVGIGGITIDNAAPVIQ 191 (227)
T ss_dssp HHHHHHHTTC----CCCEEEESSCCTTTSHHHHH
T ss_pred HHHHHHHhCC----CCCEEEEcCCCHHHHHHHHH
Confidence 7777665432 25699999999999988653
No 35
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.02 E-value=1e-09 Score=107.11 Aligned_cols=172 Identities=15% Similarity=0.055 Sum_probs=124.0
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
..|+|+.++.+...+.+.++++.+.|++++|+..+|..+... .+..+++++.+. ..+++|+|.+ +++...++
T Consensus 13 YlITd~~~~~~~~~l~~~ve~al~~Gv~~vQlR~K~~~~~~~----~~~a~~l~~l~~-~~~v~liIND---~~dlA~~~ 84 (540)
T 3nl6_A 13 YLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFF----IEEALQIKELCH-AHNVPLIIND---RIDVAMAI 84 (540)
T ss_dssp EEEC-CTTCCTTCCHHHHHHHHHHTTCSEEEECCSSSCTTHH----HHHHHHHHHHHH-HTTCCEEECS---CSHHHHHT
T ss_pred EEEECchhccCcchHHHHHHHHHHCCCCEEEEecCCCCHHHH----HHHHHHHHHHHH-hcCCEEEEeC---cHHHHHHc
Confidence 579999988888889999999999999999999999876443 344555655543 3478899976 56777889
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh-hh---cceEEEEeecCCCCCCccc--HHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL-DV---VDLVLIMSVNPGFGGQSFI--ESQVK 211 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l-~~---vD~VLvMsV~PGfgGQ~F~--~~~l~ 211 (246)
|+|-|++..+. -+....+.+...+..+|+..+ | ++++..-. .- +|+|.+..|-|..+.+... +--++
T Consensus 85 gAdGVHLgq~d----l~~~~ar~~lg~~~iiG~S~h--t-~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~ 157 (540)
T 3nl6_A 85 GADGIHVGQDD----MPIPMIRKLVGPDMVIGWSVG--F-PEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTA 157 (540)
T ss_dssp TCSEEEECTTS----SCHHHHHHHHCTTSEEEEEEC--S-HHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHH
T ss_pred CCCEEEEChhh----cCHHHHHHHhCCCCEEEEECC--C-HHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHH
Confidence 99976555442 223455555556888999996 4 44444433 34 8999999999987776653 44567
Q ss_pred HHHHHHHHHHhc-CCCCeEEEeCCCChhhhhhcc
Q 025927 212 KISDLRRMCLEK-GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 212 KI~~lr~l~~~~-~~~~~I~VDGGI~~e~i~~l~ 244 (246)
.++++++...+. ..++.+.+.||||.+|++++.
T Consensus 158 ~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~ 191 (540)
T 3nl6_A 158 GAIRVLDALERNNAHWCRTVGIGGLHPDNIERVL 191 (540)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHH
T ss_pred HHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHH
Confidence 777777766442 346789999999999998875
No 36
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.98 E-value=1.2e-10 Score=104.41 Aligned_cols=141 Identities=14% Similarity=0.145 Sum_probs=97.1
Q ss_pred eeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEe--ccCcccchHHHHhcCC
Q 025927 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM--IVEPEQRVPDFIKAGA 139 (246)
Q Consensus 62 PSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLM--V~~P~~~i~~~~~aga 139 (246)
|.++..+... .++++.++++|+|++ ||+|+++. +++++++++. .+++|+| +.+|+.++. ..++|+
T Consensus 80 Pvi~~~~~~~-~~~~~~~~~aGad~v-----~~~~~~~~---~~~~~~~~~~---~~~i~l~~~v~~~~~~~~-a~~~Ga 146 (297)
T 2zbt_A 80 PVMAKVRIGH-FVEAMILEAIGVDFI-----DESEVLTP---ADEEHHIDKW---KFKVPFVCGARNLGEALR-RIAEGA 146 (297)
T ss_dssp CEEEEEETTC-HHHHHHHHHTTCSEE-----EEETTSCC---SCSSCCCCGG---GCSSCEEEEESSHHHHHH-HHHTTC
T ss_pred CeEEEeccCC-HHHHHHHHHCCCCEE-----eeeCCCCh---HHHHHHHHHh---CCCceEEeecCCHHHHHH-HHHcCC
Confidence 4555444444 688999999999999 68887754 4566777653 3489999 889998775 588999
Q ss_pred CEEEEccCCc------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHH
Q 025927 140 DIVSVHCEQS------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 140 d~It~H~E~~------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
|+|++|-|.. +..++.++++.||+.+ | ++|.++.+.... .+..++++
T Consensus 147 d~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~---g--~t~~~~~~~~~~----------------------~~~~~~~i 199 (297)
T 2zbt_A 147 AMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQ---S--LREDELMAYAKE----------------------IGAPFELV 199 (297)
T ss_dssp SEEEECCCSSSCCTHHHHHHHHHHHHHHHHHH---H--SCGGGHHHHHHH----------------------HTCCHHHH
T ss_pred CEEEEcccccCcchHHHHhhHHHHHHHHHHcC---C--cCCCCchhhhhc----------------------chhhHHHH
Confidence 9999994321 1345667777787654 3 355555443332 12346777
Q ss_pred HHHHHHHHhcCCCCeEEEeCCC-Chhhhhhccc
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVPN 245 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~~ 245 (246)
+++++. .+..+.|++|||| |.+++.++.+
T Consensus 200 ~~l~~~---~~~pvi~~a~GGI~~~e~i~~~~~ 229 (297)
T 2zbt_A 200 KWVHDH---GRLPVVNFAAGGIATPADAALMMH 229 (297)
T ss_dssp HHHHHH---SSCSSCEEBCSSCCSHHHHHHHHH
T ss_pred HHHHHh---cCCCcEEEeeCCCCCHHHHHHHHH
Confidence 777765 2445556799999 9999988754
No 37
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.98 E-value=3.8e-09 Score=93.80 Aligned_cols=178 Identities=19% Similarity=0.195 Sum_probs=126.8
Q ss_pred CcEEeeeecccChh--hHHHHHHHHHHcCCCEEEeee------ccCcccCCC-----------CCCHHHHhhcccCC-CC
Q 025927 57 DIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVDV------MDGRFVPNI-----------TIGPLVVDALRPVT-DL 116 (246)
Q Consensus 57 ~~~IsPSIl~aD~~--~l~~~i~~l~~~g~d~lHiDI------MDG~FVpN~-----------tfgp~~I~~ir~~t-~~ 116 (246)
+..+.|=+++.|+. .-.+.++.|+++|+|+|.+++ +||..+.+. .-..+.++++|+.+ ++
T Consensus 16 ~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 16 EKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred CceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 45677888888876 444668899999999999987 677766531 11235688888765 77
Q ss_pred CeeEEEe-ccCc------ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhc-
Q 025927 117 PLDVHLM-IVEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV- 188 (246)
Q Consensus 117 plDvHLM-V~~P------~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~v- 188 (246)
|+ .+| -.|| +++++.+.++|+|.++++--. .++...+++.++++|+..-..+.|.|+.+.++.+....
T Consensus 96 Pi--~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~--~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~ 171 (262)
T 2ekc_A 96 PF--LLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLP--PEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAAD 171 (262)
T ss_dssp CE--EEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCC--HHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCS
T ss_pred CE--EEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCC
Confidence 75 567 4466 578888999999999987432 34577889999999998877889999999888877654
Q ss_pred ceEEEEeecCCCCCCc--cc-HHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhcc
Q 025927 189 DLVLIMSVNPGFGGQS--FI-ESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVP 244 (246)
Q Consensus 189 D~VLvMsV~PGfgGQ~--F~-~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~ 244 (246)
+++.++++ +|-.|+. +. +...+.++++|+.. +..+.|+|||+ .++++++.
T Consensus 172 gfiy~vs~-~g~TG~~~~~~~~~~~~~v~~vr~~~-----~~pv~vG~GI~t~e~~~~~~ 225 (262)
T 2ekc_A 172 EMTYFVSV-TGTTGAREKLPYERIKKKVEEYRELC-----DKPVVVGFGVSKKEHAREIG 225 (262)
T ss_dssp SCEEEESS-CC---------CHHHHHHHHHHHHHC-----CSCEEEESSCCSHHHHHHHH
T ss_pred CCEEEEec-CCccCCCCCcCcccHHHHHHHHHhhc-----CCCEEEeCCCCCHHHHHHHH
Confidence 45555555 4443333 44 55667888887753 34699999998 88888753
No 38
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.87 E-value=3.5e-08 Score=88.80 Aligned_cols=177 Identities=15% Similarity=0.174 Sum_probs=131.2
Q ss_pred CCCcEEeeeecccCh--hhHHHHHHHHHHcCCCEEEee------eccCcccCC-------CCC----CHHHHhhcccC-C
Q 025927 55 KSDIIVSPSILSANF--AKLGEQVKAVELAGCDWIHVD------VMDGRFVPN-------ITI----GPLVVDALRPV-T 114 (246)
Q Consensus 55 ~~~~~IsPSIl~aD~--~~l~~~i~~l~~~g~d~lHiD------IMDG~FVpN-------~tf----gp~~I~~ir~~-t 114 (246)
.++..+.|-+.+.|+ ....+.++.|+++|+|+|.+. ++||....+ -++ ..++++++|+. +
T Consensus 17 ~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~ 96 (271)
T 3nav_A 17 AQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNP 96 (271)
T ss_dssp TTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred cCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 346788999999996 456688899999999999999 899988764 122 24688888875 6
Q ss_pred CCCeeEEEecc-Cc------ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh
Q 025927 115 DLPLDVHLMIV-EP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV 187 (246)
Q Consensus 115 ~~plDvHLMV~-~P------~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~ 187 (246)
+.|+- ||.. || ++|++.+.++|+|.+.++=- ..++..++.+.++++|++.-..+.|.|+.+.++.+...
T Consensus 97 ~~Piv--lm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDl--p~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~ 172 (271)
T 3nav_A 97 ETPIG--LLMYANLVYARGIDDFYQRCQKAGVDSVLIADV--PTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQL 172 (271)
T ss_dssp TSCEE--EEECHHHHHHTCHHHHHHHHHHHTCCEEEETTS--CGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHH
T ss_pred CCCEE--EEecCcHHHHHhHHHHHHHHHHCCCCEEEECCC--CHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHH
Confidence 78876 4543 55 67899999999999988632 23456778899999999988899999999999998887
Q ss_pred c-ceEEEEeecCCCCCCc--ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhhhh
Q 025927 188 V-DLVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAY 241 (246)
Q Consensus 188 v-D~VLvMsV~PGfgGQ~--F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~ 241 (246)
. ++|-+.| ..|..|.. +.+...+.++++|+.. +.-+.|.||| +.++++
T Consensus 173 ~~gfiY~vs-~~GvTG~~~~~~~~~~~~v~~vr~~~-----~~Pv~vGfGIst~e~~~ 224 (271)
T 3nav_A 173 GKGYTYLLS-RAGVTGAETKANMPVHALLERLQQFD-----APPALLGFGISEPAQVK 224 (271)
T ss_dssp CCSCEEECC-CC--------CCHHHHHHHHHHHHTT-----CCCEEECSSCCSHHHHH
T ss_pred CCCeEEEEe-ccCCCCcccCCchhHHHHHHHHHHhc-----CCCEEEECCCCCHHHHH
Confidence 6 5544434 46766654 6666677777777653 3468899999 588887
No 39
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.74 E-value=2.7e-08 Score=90.28 Aligned_cols=126 Identities=17% Similarity=0.123 Sum_probs=89.7
Q ss_pred HHhhcccCCCCCeeEEEecc----Ccc--cchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChH
Q 025927 106 VVDALRPVTDLPLDVHLMIV----EPE--QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS 179 (246)
Q Consensus 106 ~I~~ir~~t~~plDvHLMV~----~P~--~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve 179 (246)
.++++|+.++.|+.+++|+. +|. .+++.+.++|++.|.+|.+. +.++++++|+.|++++..+ .|+-+
T Consensus 58 ~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-----p~~~~~~l~~~gi~vi~~v--~t~~~ 130 (328)
T 2gjl_A 58 EIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND-----PGEHIAEFRRHGVKVIHKC--TAVRH 130 (328)
T ss_dssp HHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-----CHHHHHHHHHTTCEEEEEE--SSHHH
T ss_pred HHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-----cHHHHHHHHHcCCCEEeeC--CCHHH
Confidence 35667777889999999997 455 78889999999999999872 2578899999999988543 44444
Q ss_pred HHHHhhhhcceEEEEeecCCCC-CCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhhhhhcc
Q 025927 180 AIECVLDVVDLVLIMSVNPGFG-GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVP 244 (246)
Q Consensus 180 ~l~~~l~~vD~VLvMsV~PGfg-GQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~ 244 (246)
....+-.-+|.|++++.++|.. |+ +....++.++++++. .+..+.++||| +.+++.++.
T Consensus 131 a~~~~~~GaD~i~v~g~~~GG~~G~-~~~~~~~~l~~v~~~-----~~iPviaaGGI~~~~~v~~al 191 (328)
T 2gjl_A 131 ALKAERLGVDAVSIDGFECAGHPGE-DDIPGLVLLPAAANR-----LRVPIIASGGFADGRGLVAAL 191 (328)
T ss_dssp HHHHHHTTCSEEEEECTTCSBCCCS-SCCCHHHHHHHHHTT-----CCSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHcCCCEEEEECCCCCcCCCC-ccccHHHHHHHHHHh-----cCCCEEEECCCCCHHHHHHHH
Confidence 4334445699999998877532 43 233445555554432 24679999999 578887653
No 40
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.68 E-value=2.3e-07 Score=78.09 Aligned_cols=158 Identities=15% Similarity=0.088 Sum_probs=106.9
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC--CCCeeEEEeccCcccchHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT--DLPLDVHLMIVEPEQRVPDF 134 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t--~~plDvHLMV~~P~~~i~~~ 134 (246)
+..+.|++-..|..+..+.++.+.++|++++++...- | .+.+.++.+|+.+ ++++-+. .+.+|+. ++..
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~----~---~~~~~i~~ir~~~~~~~~ig~~-~v~~~~~-~~~a 79 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTV----P---DADTVIKELSFLKEKGAIIGAG-TVTSVEQ-CRKA 79 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS----T---THHHHHHHTHHHHHTTCEEEEE-SCCSHHH-HHHH
T ss_pred hCCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC----h---hHHHHHHHHHHHCCCCcEEEec-ccCCHHH-HHHH
Confidence 3568899999999999999999999999999987652 2 3456788888864 2333322 4567876 5677
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.++|+|+| ++... . ..+++.+++.|+.+=. .-.|+-+...-+---+|.|-+ .|.....++
T Consensus 80 ~~~Gad~i-v~~~~--~---~~~~~~~~~~g~~vi~--g~~t~~e~~~a~~~Gad~vk~------------~~~~~~g~~ 139 (205)
T 1wa3_A 80 VESGAEFI-VSPHL--D---EEISQFCKEKGVFYMP--GVMTPTELVKAMKLGHTILKL------------FPGEVVGPQ 139 (205)
T ss_dssp HHHTCSEE-ECSSC--C---HHHHHHHHHHTCEEEC--EECSHHHHHHHHHTTCCEEEE------------TTHHHHHHH
T ss_pred HHcCCCEE-EcCCC--C---HHHHHHHHHcCCcEEC--CcCCHHHHHHHHHcCCCEEEE------------cCccccCHH
Confidence 88999999 88663 1 3578888888876522 112544433333334776643 222223456
Q ss_pred HHHHHHHhcCCCCeEEEeCCCChhhhhhcc
Q 025927 215 DLRRMCLEKGVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~ 244 (246)
.+++++...+ +..|.++|||+.+|+.++.
T Consensus 140 ~~~~l~~~~~-~~pvia~GGI~~~~~~~~~ 168 (205)
T 1wa3_A 140 FVKAMKGPFP-NVKFVPTGGVNLDNVCEWF 168 (205)
T ss_dssp HHHHHHTTCT-TCEEEEBSSCCTTTHHHHH
T ss_pred HHHHHHHhCC-CCcEEEcCCCCHHHHHHHH
Confidence 6666654432 5789999999999998765
No 41
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.62 E-value=2.1e-07 Score=84.92 Aligned_cols=123 Identities=21% Similarity=0.285 Sum_probs=92.1
Q ss_pred HHhhcccCCCCCeeEEEeccCc--ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHH
Q 025927 106 VVDALRPVTDLPLDVHLMIVEP--EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC 183 (246)
Q Consensus 106 ~I~~ir~~t~~plDvHLMV~~P--~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~ 183 (246)
.++.+|+.++.|+.|++|+.+| ..+++.+.++|++.|.+|.+. +.++++++|+.|++++..+ ++.+....
T Consensus 68 ~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~-----p~~~~~~l~~~g~~v~~~v---~s~~~a~~ 139 (326)
T 3bo9_A 68 AISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN-----PTKYIRELKENGTKVIPVV---ASDSLARM 139 (326)
T ss_dssp HHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-----CHHHHHHHHHTTCEEEEEE---SSHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-----cHHHHHHHHHcCCcEEEEc---CCHHHHHH
Confidence 4566777788999999999777 578888899999999999873 3568899999999998866 46666666
Q ss_pred hhhh-cceEEEEeecCCCC-CCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhcc
Q 025927 184 VLDV-VDLVLIMSVNPGFG-GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVP 244 (246)
Q Consensus 184 ~l~~-vD~VLvMsV~PGfg-GQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~ 244 (246)
..+. +|.|++.+.++|.. |+.+ .++-++++++. . +..+.++|||+ .+++.++.
T Consensus 140 a~~~GaD~i~v~g~~~GG~~G~~~---~~~ll~~i~~~---~--~iPviaaGGI~~~~dv~~al 195 (326)
T 3bo9_A 140 VERAGADAVIAEGMESGGHIGEVT---TFVLVNKVSRS---V--NIPVIAAGGIADGRGMAAAF 195 (326)
T ss_dssp HHHTTCSCEEEECTTSSEECCSSC---HHHHHHHHHHH---C--SSCEEEESSCCSHHHHHHHH
T ss_pred HHHcCCCEEEEECCCCCccCCCcc---HHHHHHHHHHH---c--CCCEEEECCCCCHHHHHHHH
Confidence 6554 99999999887643 5443 33334444332 2 45689999998 88887654
No 42
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=98.42 E-value=4.5e-07 Score=78.46 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=87.8
Q ss_pred CcccCCCCCCHHHHhhcccCCCCCe---eEEEeccCcccc-----hHHHHhcCCCEEEE-ccCCc-ccccHHHHHHHHHH
Q 025927 94 GRFVPNITIGPLVVDALRPVTDLPL---DVHLMIVEPEQR-----VPDFIKAGADIVSV-HCEQS-STIHLHRTLNQIKD 163 (246)
Q Consensus 94 G~FVpN~tfgp~~I~~ir~~t~~pl---DvHLMV~~P~~~-----i~~~~~agad~It~-H~E~~-~~~~~~~~i~~Ik~ 163 (246)
-.|.|++++- +++|+.+++|+ |+| ..++..| ++.+.++|||.|.+ |.|-. ...+..+.++.+++
T Consensus 36 ~~~~~~~~~l----~~v~~~~~~~v~aqd~~--~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~ 109 (219)
T 2h6r_A 36 IGVAPQFVDL----RMIVENVNIPVYAQHID--NINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKN 109 (219)
T ss_dssp EEEECCTTTH----HHHHHHCCSCBEESCCC--SCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHH
T ss_pred EEEECCHHHH----HHHHHHcCCcEEEEECC--hhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHH
Confidence 3688887764 55555557888 766 5567777 99999999999999 87631 12357788899999
Q ss_pred cCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCC---CC---CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 164 LGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF---GG---QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 164 ~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGf---gG---Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
+|+.+.+-+.+.++.+.+..+ .. .++.++|.+ .| +.|.++.+++..++.+... .+..|.+.|||+.
T Consensus 110 ~Gl~~iv~v~~~~e~~~~~~~--~~---~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~---~~~~ii~ggGI~~ 181 (219)
T 2h6r_A 110 LGLETIVCTNNINTSKAVAAL--SP---DCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEIN---KDVKVLCGAGISK 181 (219)
T ss_dssp HTCEEEEEESSSHHHHHHTTT--CC---SEEEECCCC--------------CSHHHHHHHHHHC---TTCEEEECSSCCS
T ss_pred CCCeEEEEeCCchHHHHHHhC--CC---CEEEEEeccccccCCCCccCCHHHHHHHHHHHHhcc---CCCeEEEEeCcCc
Confidence 999999999988876655443 22 367777755 46 7887764444333322222 1467999999996
Q ss_pred -hhhhhc
Q 025927 238 -KNAYKV 243 (246)
Q Consensus 238 -e~i~~l 243 (246)
+.++.+
T Consensus 182 ~~~~~~~ 188 (219)
T 2h6r_A 182 GEDVKAA 188 (219)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 555444
No 43
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.30 E-value=3.1e-06 Score=77.03 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=89.4
Q ss_pred HHhhcccCCCCCeeEEEeccCcc--cchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHH
Q 025927 106 VVDALRPVTDLPLDVHLMIVEPE--QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC 183 (246)
Q Consensus 106 ~I~~ir~~t~~plDvHLMV~~P~--~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~ 183 (246)
.++.+++.++.|+-|.+++.+|. ..++.+.++|+|.|.+|... +.++++.+|+.|+++++-+ ++++..+.
T Consensus 54 ~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~-----p~~~i~~l~~~g~~v~~~v---~~~~~a~~ 125 (332)
T 2z6i_A 54 NIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN-----PSKYMERFHEAGIIVIPVV---PSVALAKR 125 (332)
T ss_dssp HHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC-----GGGTHHHHHHTTCEEEEEE---SSHHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC-----hHHHHHHHHHcCCeEEEEe---CCHHHHHH
Confidence 45566777788999999997765 67888889999999999863 3457888899999998776 46666666
Q ss_pred hhhh-cceEEEEeecCCC-CCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhcc
Q 025927 184 VLDV-VDLVLIMSVNPGF-GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVP 244 (246)
Q Consensus 184 ~l~~-vD~VLvMsV~PGf-gGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~ 244 (246)
+.+. +|+|.+.+.++|. .|+.+. ++-++++++.. +..+.+.|||+ .+++.++.
T Consensus 126 ~~~~GaD~i~v~g~~~GG~~g~~~~---~~ll~~i~~~~-----~iPViaaGGI~~~~~~~~al 181 (332)
T 2z6i_A 126 MEKIGADAVIAEGMEAGGHIGKLTT---MTLVRQVATAI-----SIPVIAAGGIADGEGAAAGF 181 (332)
T ss_dssp HHHTTCSCEEEECTTSSEECCSSCH---HHHHHHHHHHC-----SSCEEEESSCCSHHHHHHHH
T ss_pred HHHcCCCEEEEECCCCCCCCCCccH---HHHHHHHHHhc-----CCCEEEECCCCCHHHHHHHH
Confidence 6554 9999998876653 355443 33344444332 35688999998 88887653
No 44
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=98.22 E-value=2.4e-07 Score=84.80 Aligned_cols=165 Identities=13% Similarity=0.209 Sum_probs=103.9
Q ss_pred eeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCC-CCCCHHHHhhcccC--CCCCeeEEEecc--CcccchHHHHh
Q 025927 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN-ITIGPLVVDALRPV--TDLPLDVHLMIV--EPEQRVPDFIK 136 (246)
Q Consensus 62 PSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN-~tfgp~~I~~ir~~--t~~plDvHLMV~--~P~~~i~~~~~ 136 (246)
+=++++|+.++++.++.+++.+-...++.| | +|+ .++||+.+++|++. ..+++|+|+|-- .+..+++.+.+
T Consensus 26 ~LiVALD~~~~~eal~l~~~l~~~v~~vKV--G--~~lf~~~G~~~V~~Lk~~~g~~IflDlKl~DIpnTv~~av~~~a~ 101 (303)
T 3ru6_A 26 KLCVALDLSTKEECLQLAKELKNLDIWLKV--G--LRAYLRDGFKFIEELKKVDDFKIFLDLKFHDIPNTMADACEEVSK 101 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHTTTSSCEEEE--C--HHHHHHHTHHHHHHHHHHCCCEEEEEEEECSCHHHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHhCCCccEEEe--C--HHHHHHhCHHHHHHHHHhhCCCEEEEeeeccCchhHHHHHHHHHh
Confidence 346789999999888888887644445555 3 577 48999999999875 456999999843 35678888999
Q ss_pred cCCCEEEEccCCcccccHHHHHHHHHHcCC---cEEEEEcCCCChHHHHHhhh--hcceEEE---EeecCCCCCCcccHH
Q 025927 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGA---KAGVVLNPATSLSAIECVLD--VVDLVLI---MSVNPGFGGQSFIES 208 (246)
Q Consensus 137 agad~It~H~E~~~~~~~~~~i~~Ik~~G~---k~GlAlnP~Tpve~l~~~l~--~vD~VLv---MsV~PGfgGQ~F~~~ 208 (246)
+|+|++|+|..+. ..-+..+++..++.|. -.||.+-..++-+.+.++++ ..+.|+- ++.+.|..|----+.
T Consensus 102 lGaD~vTVHa~~G-~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~ 180 (303)
T 3ru6_A 102 LGVDMINIHASAG-KIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVF 180 (303)
T ss_dssp TTCSEEEEEGGGC-HHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTT
T ss_pred cCCCEEEEeccCC-HHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 9999999999852 2334455555555553 24565566666555544311 1111221 234455444111111
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEeCCCChh
Q 025927 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPK 238 (246)
Q Consensus 209 ~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e 238 (246)
- ++.+|+.. +.++ +.|-+||+++
T Consensus 181 E---~~~IR~~~---~~~f-l~VTPGIr~q 203 (303)
T 3ru6_A 181 E---SKKIKEHT---SSNF-LTLTPGIRPF 203 (303)
T ss_dssp T---HHHHHHHS---CTTS-EEEECCCCTT
T ss_pred H---HHHHHHhC---CCcc-EEECCCcCcc
Confidence 1 34455544 3334 7789999977
No 45
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.13 E-value=9.4e-06 Score=74.79 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=69.6
Q ss_pred ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh-hhcceEEEEeecCCCCCCc--
Q 025927 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL-DVVDLVLIMSVNPGFGGQS-- 204 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l-~~vD~VLvMsV~PGfgGQ~-- 204 (246)
..+++.+.+.|++.|.+|.+. . ..++++.+|+.|+++++.+. .++...... .-+|+|++- .|++||+.
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~---~-~~~~i~~~~~~g~~v~~~v~---t~~~a~~a~~~GaD~i~v~--g~~~GGh~g~ 182 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGV---P-DREVIARLRRAGTLTLVTAT---TPEEARAVEAAGADAVIAQ--GVEAGGHQGT 182 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSC---C-CHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEEE--CTTCSEECCC
T ss_pred HHHHHHHHhcCCCEEEEeCCC---C-cHHHHHHHHHCCCeEEEECC---CHHHHHHHHHcCCCEEEEe--CCCcCCcCCC
Confidence 456778888999999999884 1 24678899999999998773 344444433 349999884 45555532
Q ss_pred ccH---------HHHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhhhhhcc
Q 025927 205 FIE---------SQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVP 244 (246)
Q Consensus 205 F~~---------~~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~ 244 (246)
+.+ ..++.++++++. .++.+.++||| +.+++.++.
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~i~~~-----~~iPViaaGGI~~~~~~~~~l 227 (369)
T 3bw2_A 183 HRDSSEDDGAGIGLLSLLAQVREA-----VDIPVVAAGGIMRGGQIAAVL 227 (369)
T ss_dssp SSCCGGGTTCCCCHHHHHHHHHHH-----CSSCEEEESSCCSHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHh-----cCceEEEECCCCCHHHHHHHH
Confidence 221 124445554443 24578999999 899987764
No 46
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.10 E-value=4.5e-06 Score=73.71 Aligned_cols=170 Identities=13% Similarity=0.058 Sum_probs=102.3
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCc----ccCCCCCCHH----HHhhcccCCCCCeeEEEeccCccc
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGR----FVPNITIGPL----VVDALRPVTDLPLDVHLMIVEPEQ 129 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~----FVpN~tfgp~----~I~~ir~~t~~plDvHLMV~~P~~ 129 (246)
..|++.-.+ ...+.+.++++.+.|++++|+=--|.. |- ++... ..+++++.+. ..+++|+|.++.+
T Consensus 33 ylIt~~~~~--~~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~---~l~~~~~~~~a~~l~~l~~-~~~~~liInd~~~ 106 (243)
T 3o63_A 33 YLCTDARRE--RGDLAQFAEAALAGGVDIIQLRDKGSPGELRFG---PLQARDELAACEILADAAH-RYGALFAVNDRAD 106 (243)
T ss_dssp EEEECCCTT--TCCHHHHHHHHHHTTCSEEEECCTTCHHHHHHC---SCCHHHHHHHHHHHHHHHH-HTTCEEEEESCHH
T ss_pred EEEECCCcc--cchHHHHHHHHHHCCCCEEEEccCCCCcccccc---CCCHHHHHHHHHHHHHHHH-hhCCEEEEeCHHH
Confidence 456665433 245788888888999999999765511 00 01121 2233444331 2367889987654
Q ss_pred chHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHH
Q 025927 130 RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQ 209 (246)
Q Consensus 130 ~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~ 209 (246)
...++|+|.| |+... ..+...++.+...+..+|+.. .|+-|..+-.-.-+|+|.+..|-|....+.+.+..
T Consensus 107 ---lA~~~gAdGV--HLg~~--dl~~~~~r~~~~~~~~iG~S~--ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~g 177 (243)
T 3o63_A 107 ---IARAAGADVL--HLGQR--DLPVNVARQILAPDTLIGRST--HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPG 177 (243)
T ss_dssp ---HHHHHTCSEE--EECTT--SSCHHHHHHHSCTTCEEEEEE--CSHHHHHHHHHSSCSEEEECCSSCCCC-----CCC
T ss_pred ---HHHHhCCCEE--EecCC--cCCHHHHHHhhCCCCEEEEeC--CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhh
Confidence 3567799985 55531 222344555445577888876 45444333334569999999998877665554556
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 210 VKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 210 l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++.++++++.. ..++.+.+.||||.+|++++.+
T Consensus 178 l~~l~~~~~~~---~~~iPvvAiGGI~~~ni~~~~~ 210 (243)
T 3o63_A 178 LGLVRVAAELG---GDDKPWFAIGGINAQRLPAVLD 210 (243)
T ss_dssp HHHHHHHHTC------CCCEEEESSCCTTTHHHHHH
T ss_pred HHHHHHHHHhc---cCCCCEEEecCCCHHHHHHHHH
Confidence 66666665431 1246788999999999988754
No 47
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.99 E-value=0.00014 Score=64.25 Aligned_cols=162 Identities=16% Similarity=0.162 Sum_probs=108.5
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~ 149 (246)
.+..+..+..+++|+++||+ +-|-.|. .=.++.++.+|+.+++|+-+-=-+.+|.+ ++....+|||.|.+=....
T Consensus 65 ~~p~~~A~~~~~~GA~~isv-lt~~~~f---~G~~~~l~~i~~~v~lPvl~kdfI~d~~q-i~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSV-LTEPHRF---GGSLLDLKRVREAVDLPLLRKDFVVDPFM-LEEARAFGASAALLIVALL 139 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEE-ECCCSSS---CCCHHHHHHHHHHCCSCEEEESCCCSHHH-HHHHHHTTCSEEEEEHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEE-ecchhhh---ccCHHHHHHHHHhcCCCEEECCcCCCHHH-HHHHHHcCCCEEEECccch
Confidence 56677788899999999999 4443342 22577899999988999766555666654 5667889999999876654
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCe
Q 025927 150 STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
. ..+.++++..++.|+.+-+.++- .++++..++ ..|+| .|+|=+ -..|-+. ++..+++++..+..+.+..
T Consensus 140 ~-~~l~~l~~~a~~lGl~~lvev~~---~~E~~~a~~~gad~I---Gvn~~~-l~~~~~d-l~~~~~L~~~i~~~~~~~~ 210 (254)
T 1vc4_A 140 G-ELTGAYLEEARRLGLEALVEVHT---ERELEIALEAGAEVL---GINNRD-LATLHIN-LETAPRLGRLARKRGFGGV 210 (254)
T ss_dssp G-GGHHHHHHHHHHHTCEEEEEECS---HHHHHHHHHHTCSEE---EEESBC-TTTCCBC-TTHHHHHHHHHHHTTCCSE
T ss_pred H-HHHHHHHHHHHHCCCeEEEEECC---HHHHHHHHHcCCCEE---EEcccc-CcCCCCC-HHHHHHHHHhCccccCCCe
Confidence 4 57888888889999888777763 344444433 35665 444411 1122221 3444555666654322345
Q ss_pred EEEeCCCC-hhhhhhccc
Q 025927 229 IEVDGGVG-PKNAYKVPN 245 (246)
Q Consensus 229 I~VDGGI~-~e~i~~l~~ 245 (246)
+..-|||+ .++++++.+
T Consensus 211 vIAegGI~s~~dv~~l~~ 228 (254)
T 1vc4_A 211 LVAESGYSRKEELKALEG 228 (254)
T ss_dssp EEEESCCCSHHHHHTTTT
T ss_pred EEEEcCCCCHHHHHHHHc
Confidence 66799998 999888753
No 48
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.98 E-value=5.9e-05 Score=67.49 Aligned_cols=177 Identities=19% Similarity=0.239 Sum_probs=115.7
Q ss_pred CCcEEeeeecccChh--hHHHHHHHHHHcCCCEEEeee------ccCcccC---------CCCCC--HHHHhhcccCCCC
Q 025927 56 SDIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVDV------MDGRFVP---------NITIG--PLVVDALRPVTDL 116 (246)
Q Consensus 56 ~~~~IsPSIl~aD~~--~l~~~i~~l~~~g~d~lHiDI------MDG~FVp---------N~tfg--p~~I~~ir~~t~~ 116 (246)
++..+.|=+++.|+. .-.+.++.|.++ +|+|-+++ +||..+- .++.. .+.++++|+..++
T Consensus 14 ~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~ 92 (271)
T 1ujp_A 14 GRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEK 92 (271)
T ss_dssp TBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCS
T ss_pred CCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 356778888888875 334677888888 99999976 5555442 12211 3568888887778
Q ss_pred CeeEEEecc-Cc------ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-c
Q 025927 117 PLDVHLMIV-EP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-V 188 (246)
Q Consensus 117 plDvHLMV~-~P------~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-v 188 (246)
|+-+ |.. || +++++.+.++|+|.+.+. .. ..++...+++.++++|+..=..+.|.|+.+.++.+... .
T Consensus 93 Pii~--m~y~n~v~~~g~~~f~~~~~~aG~dGviv~-Dl-~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~ 168 (271)
T 1ujp_A 93 PLFL--MTYLNPVLAWGPERFFGLFKQAGATGVILP-DL-PPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHAT 168 (271)
T ss_dssp CEEE--ECCHHHHHHHCHHHHHHHHHHHTCCEEECT-TC-CGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCC
T ss_pred CEEE--EecCcHHHHhhHHHHHHHHHHcCCCEEEec-CC-CHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCC
Confidence 8665 553 55 567888999999977764 32 13456678899999999877788999999988887654 4
Q ss_pred ceEEEEeecCCCCCCc--ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhc
Q 025927 189 DLVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (246)
Q Consensus 189 D~VLvMsV~PGfgGQ~--F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l 243 (246)
.++.+.++ .|..|.. +.+...+.++++|+.. +..+.|=|||+ .++++++
T Consensus 169 gfiy~vs~-~G~TG~~~~~~~~~~~~v~~vr~~~-----~~Pv~vGfGI~t~e~a~~~ 220 (271)
T 1ujp_A 169 GFVYAVSV-TGVTGMRERLPEEVKDLVRRIKART-----ALPVAVGFGVSGKATAAQA 220 (271)
T ss_dssp SCEEEECC-------------CCHHHHHHHHTTC-----CSCEEEESCCCSHHHHHHH
T ss_pred CCEEEEec-CcccCCCCCCCccHHHHHHHHHhhc-----CCCEEEEcCCCCHHHHHHh
Confidence 45544443 5665553 3334445566665542 35689999998 8988875
No 49
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=97.98 E-value=4.2e-07 Score=78.65 Aligned_cols=120 Identities=17% Similarity=0.146 Sum_probs=77.5
Q ss_pred CCHHHHhhcccC-CCCCeeEEE--eccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 102 IGPLVVDALRPV-TDLPLDVHL--MIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 102 fgp~~I~~ir~~-t~~plDvHL--MV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
+|++.+++||+. ..+++|+++ +.+.+..+++.+.++|||.+|+|.+. ..+ .++...+..-..++++-+-|+.
T Consensus 46 ~G~~~v~~l~~~~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~~--G~~---~l~~~~~~~~~~~~~V~~lts~ 120 (213)
T 1vqt_A 46 HGKKIFDELAKRNLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSCA--GYE---SVERALSATDKHVFVVVKLTSM 120 (213)
T ss_dssp TCTHHHHHHHTTTCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGGG--CHH---HHHHHHHHCSSEEEEECCCTTS
T ss_pred hCHHHHHHHHHCCCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEeccC--CHH---HHHHHHHhcCCCeEEEEEeCCC
Confidence 899999999986 457999988 68888999999999999999999985 222 3333332221457777666665
Q ss_pred HH-HHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChhhh
Q 025927 179 SA-IECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNA 240 (246)
Q Consensus 179 e~-l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i 240 (246)
+. +. +.++.+..| +++|++ |.... ++++++|+.++ . . .|+|||+.++.
T Consensus 121 ~~~l~---~~v~~~a~~-~e~G~d---vV~~~-~~~~~ir~~~~---~--~-~v~pGI~~~~~ 169 (213)
T 1vqt_A 121 EGSLE---DYMDRIEKL-NKLGCD---FVLPG-PWAKALREKIK---G--K-ILVPGIRMEVK 169 (213)
T ss_dssp CCCHH---HHHHHHHHH-HHHTCE---EECCH-HHHHHHTTTCC---S--C-EEECCBC----
T ss_pred CHHHH---HHHHHHHHH-hcCCCE---EEEcH-HHHHHHHHHCC---C--C-EEECCCCCCCC
Confidence 22 21 334444445 677765 44433 55555555432 2 3 89999998864
No 50
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.76 E-value=0.0011 Score=59.60 Aligned_cols=169 Identities=19% Similarity=0.194 Sum_probs=111.7
Q ss_pred Eeeee--cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 60 VSPSI--LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 60 IsPSI--l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
-|||- ++.| .+..+..+..+++|+++||+=--++.|- =+++.++++|+.+++|+-.-=.+.+|. .+.....+
T Consensus 68 aSPSkG~i~~~-~dp~~~A~~y~~~GA~~IsVltd~~~f~----Gs~~~L~~ir~~v~lPVl~Kdfi~d~~-qi~ea~~~ 141 (272)
T 3tsm_A 68 ASPSKGLIRPD-FDPPALAKAYEEGGAACLSVLTDTPSFQ----GAPEFLTAARQACSLPALRKDFLFDPY-QVYEARSW 141 (272)
T ss_dssp EETTTEESCSS-CCHHHHHHHHHHTTCSEEEEECCSTTTC----CCHHHHHHHHHTSSSCEEEESCCCSTH-HHHHHHHT
T ss_pred CCCCCCccCCC-CCHHHHHHHHHHCCCCEEEEeccccccC----CCHHHHHHHHHhcCCCEEECCccCCHH-HHHHHHHc
Confidence 35662 4444 3566778888999999999855443332 377899999998899983322344555 46677889
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~l 216 (246)
|||.|.+=.-......+.++++.+++.|+.+=+-++ ..++++..+. ..|+| +|++- ....|..+ ++...+|
T Consensus 142 GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh---~~eEl~~A~~~ga~iI---Ginnr-~l~t~~~d-l~~~~~L 213 (272)
T 3tsm_A 142 GADCILIIMASVDDDLAKELEDTAFALGMDALIEVH---DEAEMERALKLSSRLL---GVNNR-NLRSFEVN-LAVSERL 213 (272)
T ss_dssp TCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHTTSCCSEE---EEECB-CTTTCCBC-THHHHHH
T ss_pred CCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHhcCCCEE---EECCC-CCccCCCC-hHHHHHH
Confidence 999988876654334678899999999988766664 4566665543 37766 44431 12233332 4444555
Q ss_pred HHHHHhcCCCCeEEEeCCC-Chhhhhhccc
Q 025927 217 RRMCLEKGVNPWIEVDGGV-GPKNAYKVPN 245 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI-~~e~i~~l~~ 245 (246)
.+.+++ +..+-.-||| +.+.++++.+
T Consensus 214 ~~~ip~---~~~vIaesGI~t~edv~~l~~ 240 (272)
T 3tsm_A 214 AKMAPS---DRLLVGESGIFTHEDCLRLEK 240 (272)
T ss_dssp HHHSCT---TSEEEEESSCCSHHHHHHHHT
T ss_pred HHhCCC---CCcEEEECCCCCHHHHHHHHH
Confidence 555543 4567789999 8888887754
No 51
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.67 E-value=0.00031 Score=65.23 Aligned_cols=153 Identities=18% Similarity=0.213 Sum_probs=98.1
Q ss_pred HHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHH
Q 025927 78 AVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRT 157 (246)
Q Consensus 78 ~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~ 157 (246)
..++.|+..+|- ++-+.- -.+.++.+|+.+++|+-+.+.+.. ..+++.+.++|+|.|.++...-......+.
T Consensus 65 vA~~GGlgii~~-----~~s~e~--~~~~I~~vk~~~~~pvga~ig~~~-~e~a~~l~eaGad~I~ld~a~G~~~~~~~~ 136 (361)
T 3khj_A 65 MARLGGIGIIHK-----NMDMES--QVNEVLKVKNSGGLRVGAAIGVNE-IERAKLLVEAGVDVIVLDSAHGHSLNIIRT 136 (361)
T ss_dssp HHHTTCEEEECS-----SSCHHH--HHHHHHHHHHTTCCCCEEEECTTC-HHHHHHHHHTTCSEEEECCSCCSBHHHHHH
T ss_pred HHHcCCCeEEec-----CCCHHH--HHHHHHHHHhccCceEEEEeCCCH-HHHHHHHHHcCcCeEEEeCCCCCcHHHHHH
Confidence 345678899982 121110 113556667678899999998865 788999999999999987653112234567
Q ss_pred HHHHHHc-CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCC-C-C---cccHHHHHHHHHHHHHHHhcCCCCeEE
Q 025927 158 LNQIKDL-GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFG-G-Q---SFIESQVKKISDLRRMCLEKGVNPWIE 230 (246)
Q Consensus 158 i~~Ik~~-G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfg-G-Q---~F~~~~l~KI~~lr~l~~~~~~~~~I~ 230 (246)
++++|+. ++.+.+ ..-+..+..+.+++. +|.|.+ ++.||.- + + .+-...+.-+.++++..++. +..|.
T Consensus 137 i~~i~~~~~~~Viv--g~v~t~e~A~~l~~aGaD~I~V-G~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVI 211 (361)
T 3khj_A 137 LKEIKSKMNIDVIV--GNVVTEEATKELIENGADGIKV-GIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPII 211 (361)
T ss_dssp HHHHHHHCCCEEEE--EEECSHHHHHHHHHTTCSEEEE-CSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHH--TCCEE
T ss_pred HHHHHHhcCCcEEE--ccCCCHHHHHHHHHcCcCEEEE-ecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhc--CCeEE
Confidence 7777776 665543 223556777777665 999988 7778741 1 0 01112355566666655443 35688
Q ss_pred EeCCC-Chhhhhhc
Q 025927 231 VDGGV-GPKNAYKV 243 (246)
Q Consensus 231 VDGGI-~~e~i~~l 243 (246)
.|||| +.+++.++
T Consensus 212 A~GGI~~~~di~ka 225 (361)
T 3khj_A 212 ADGGIRYSGDIGKA 225 (361)
T ss_dssp EESCCCSHHHHHHH
T ss_pred EECCCCCHHHHHHH
Confidence 99999 57777654
No 52
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.64 E-value=0.0015 Score=58.19 Aligned_cols=184 Identities=11% Similarity=0.127 Sum_probs=125.6
Q ss_pred ccccc-CCCCCcEEeeeecccChh--hHHHHHHHHHHcCCCEEEeee------ccCcccC---------CCCC--CHHHH
Q 025927 48 ARVDK-FSKSDIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVDV------MDGRFVP---------NITI--GPLVV 107 (246)
Q Consensus 48 ~~~~~-~~~~~~~IsPSIl~aD~~--~l~~~i~~l~~~g~d~lHiDI------MDG~FVp---------N~tf--gp~~I 107 (246)
+|++. |. +..+.|=+.+.|+. .-.+.++.|+++|+|.|-+-| +||-..- .+++ -.+++
T Consensus 5 ~ri~~~f~--~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~ 82 (252)
T 3tha_A 5 VDFRKFYK--ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELL 82 (252)
T ss_dssp CCGGGSCS--SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHhc--CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 45553 43 56788889888874 445678888999999999975 6775443 1111 23455
Q ss_pred hhcccCCCCCeeEEEecc-Cc------ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHH
Q 025927 108 DALRPVTDLPLDVHLMIV-EP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA 180 (246)
Q Consensus 108 ~~ir~~t~~plDvHLMV~-~P------~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~ 180 (246)
+++|+. .| +=||.+ || ++|++.+.++|+|-+.+.== ..++..++.+..+++|++.=.-+.|.|+.+.
T Consensus 83 ~~~r~~--~P--ivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDL--P~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eR 156 (252)
T 3tha_A 83 ARIKTK--KA--LVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPEL--SFEESDDLIKECERYNIALITLVSVTTPKER 156 (252)
T ss_dssp HHCCCS--SE--EEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTC--CGGGCHHHHHHHHHTTCEECEEEETTSCHHH
T ss_pred HHHhcC--CC--EEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCC--CHHHHHHHHHHHHHcCCeEEEEeCCCCcHHH
Confidence 666643 45 447765 44 56888889999998887521 1234567888889999999888999999999
Q ss_pred HHHhhhhc-ceEEEEeecCCCCCCc--ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhhhhhccc
Q 025927 181 IECVLDVV-DLVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVPN 245 (246)
Q Consensus 181 l~~~l~~v-D~VLvMsV~PGfgGQ~--F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~~ 245 (246)
++.+.... ++|-+.+ -.|-.|.. +.+...+.++++|+.. +.-+.|-+|| +.++++++.+
T Consensus 157 i~~ia~~a~gFiY~Vs-~~GvTG~~~~~~~~~~~~v~~vr~~~-----~~Pv~vGfGIst~e~a~~~~~ 219 (252)
T 3tha_A 157 VKKLVKHAKGFIYLLA-SIGITGTKSVEEAILQDKVKEIRSFT-----NLPIFVGFGIQNNQDVKRMRK 219 (252)
T ss_dssp HHHHHTTCCSCEEEEC-CSCSSSCSHHHHHHHHHHHHHHHTTC-----CSCEEEESSCCSHHHHHHHTT
T ss_pred HHHHHHhCCCeEEEEe-cCCCCCcccCCCHHHHHHHHHHHHhc-----CCcEEEEcCcCCHHHHHHHHh
Confidence 99988876 5555544 35766665 3344455555555542 3568999999 7788877653
No 53
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.63 E-value=0.00031 Score=60.32 Aligned_cols=163 Identities=15% Similarity=0.112 Sum_probs=102.1
Q ss_pred hhHHHHHHHHHHcCCCEEEe-eeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCC
Q 025927 70 AKLGEQVKAVELAGCDWIHV-DVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHi-DIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~ 148 (246)
.+..+.++.++++|+|++|+ |. ++.+. ......+.++++++.+++|+-+-=-+.+++ .++.+.++|||.|.+--..
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~-~~~~~-~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~-~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDI-SATHE-ERAILLDVVARVAERVFIPLTVGGGVRSLE-DARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEEC-CSSTT-CHHHHHHHHHHHHTTCCSCEEEESSCCSHH-HHHHHHHHTCSEEEECHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcC-Ccccc-CccccHHHHHHHHHhCCCCEEEECCcCCHH-HHHHHHHcCCCEEEEChHH
Confidence 35566778889999999998 43 22221 112234568888887888888766666665 5777888999999987654
Q ss_pred cccccHHHHHHHHHHcC---CcEEEEEcC-----------------CCChHHHHHhhhh-cceEEEEeecCCCCCCcccH
Q 025927 149 SSTIHLHRTLNQIKDLG---AKAGVVLNP-----------------ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIE 207 (246)
Q Consensus 149 ~~~~~~~~~i~~Ik~~G---~k~GlAlnP-----------------~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~ 207 (246)
. .++..+-+..+..| +.+|+..+. .++.+.++.+.+. ++.|++.++...-..+.+.
T Consensus 108 l--~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~- 184 (252)
T 1ka9_F 108 V--RRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGYD- 184 (252)
T ss_dssp H--HCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCC-
T ss_pred H--hCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCCC-
Confidence 2 23332333334445 346666532 1345666666555 8999888776532223333
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhccc
Q 025927 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVPN 245 (246)
Q Consensus 208 ~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~~ 245 (246)
++.++++++.. +..+.+-|||+. +++.++.+
T Consensus 185 --~~~i~~l~~~~-----~ipvia~GGI~~~~d~~~~~~ 216 (252)
T 1ka9_F 185 --LRLTRMVAEAV-----GVPVIASGGAGRMEHFLEAFQ 216 (252)
T ss_dssp --HHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHHH
T ss_pred --HHHHHHHHHHc-----CCCEEEeCCCCCHHHHHHHHH
Confidence 44455555443 346788999995 88887653
No 54
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.63 E-value=0.0023 Score=55.74 Aligned_cols=152 Identities=15% Similarity=0.168 Sum_probs=100.5
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc---------Cc-ccchHHHHhcC
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV---------EP-EQRVPDFIKAG 138 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~---------~P-~~~i~~~~~ag 138 (246)
.....+..+.++++|+..+-+ | +++.|+++|+.+++|+ +=+.-. .| ...++.+.++|
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~----~--------~~~~i~~ir~~v~~Pv-ig~~k~d~~~~~~~I~~~~~~i~~~~~~G 101 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRI----E--------GIDNLRMTRSLVSVPI-IGIIKRDLDESPVRITPFLDDVDALAQAG 101 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE----E--------SHHHHHHHHTTCCSCE-EEECBCCCSSCCCCBSCSHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHCCCeEEEE----C--------CHHHHHHHHHhcCCCE-EEEEeecCCCcceEeCccHHHHHHHHHcC
Confidence 456778889999999999876 1 4789999999999996 211211 23 23577889999
Q ss_pred CCEEEEccCCc-ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCCCC--cccHHHHHHHH
Q 025927 139 ADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQ--SFIESQVKKIS 214 (246)
Q Consensus 139 ad~It~H~E~~-~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ--~F~~~~l~KI~ 214 (246)
+|.|.+-.-.. ....+.++++++|+.|+.+++-+. ..+..+...+. +|+|-+ ..-|+.+. .+.+ .++-++
T Consensus 102 ad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~---t~eea~~a~~~Gad~Ig~--~~~g~t~~~~~~~~-~~~~i~ 175 (232)
T 3igs_A 102 AAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS---SVDDGLACQRLGADIIGT--TMSGYTTPDTPEEP-DLPLVK 175 (232)
T ss_dssp CSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHTTCSEEEC--TTTTSSSSSCCSSC-CHHHHH
T ss_pred CCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC---CHHHHHHHHhCCCCEEEE--cCccCCCCCCCCCC-CHHHHH
Confidence 99998644321 123578899999999998887543 45666665543 888743 12244321 2322 344455
Q ss_pred HHHHHHHhcCCCCeEEEeCCC-Chhhhhhccc
Q 025927 215 DLRRMCLEKGVNPWIEVDGGV-GPKNAYKVPN 245 (246)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~~ 245 (246)
++++ . +..+-..||| +.+++.++.+
T Consensus 176 ~l~~---~---~ipvIA~GGI~t~~d~~~~~~ 201 (232)
T 3igs_A 176 ALHD---A---GCRVIAEGRYNSPALAAEAIR 201 (232)
T ss_dssp HHHH---T---TCCEEEESCCCSHHHHHHHHH
T ss_pred HHHh---c---CCcEEEECCCCCHHHHHHHHH
Confidence 5443 2 3568899999 5899887654
No 55
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.59 E-value=0.0006 Score=59.10 Aligned_cols=164 Identities=18% Similarity=0.143 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc-
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS- 149 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~- 149 (246)
...+.++.++++|++++|+==+|+.+- ......+.++.+++.+++|+-+-=-+.++++ ++.+.++|+|.+.+--...
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~-i~~~~~~Gad~v~lg~~~~~ 108 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLTTLPIIASGGAGKMEH-FLEAFLAGADKALAASVFHF 108 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGCCSCEEEESCCCSTHH-HHHHHHHTCSEEECCCCC--
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhcCCCEEEECCCCCHHH-HHHHHHcCCcHhhhhHHHHh
Confidence 455667888899999999821222221 1234578899999888888777555566555 5677789999998876532
Q ss_pred ccccHHHHHHHHHHcC--C-cEEEEEcCC-------------------CChHHHHHhhh-hcceEEEEeecCCCCCCccc
Q 025927 150 STIHLHRTLNQIKDLG--A-KAGVVLNPA-------------------TSLSAIECVLD-VVDLVLIMSVNPGFGGQSFI 206 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~~G--~-k~GlAlnP~-------------------Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~ 206 (246)
...++..+.+.+++.| . ++-+++.+. ++.+.++.+.. -++.|.+.++...-..+.+.
T Consensus 109 ~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~ 188 (266)
T 2w6r_A 109 REIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYD 188 (266)
T ss_dssp ----CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSCCC
T ss_pred CCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCCCC
Confidence 1014444444445555 2 333444431 33454454433 38999998776532223333
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhcc
Q 025927 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVP 244 (246)
Q Consensus 207 ~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~ 244 (246)
++.++++++. .+..+.+-|||+. +++.++.
T Consensus 189 ---~~~i~~l~~~-----~~ipvia~GGI~~~ed~~~~~ 219 (266)
T 2w6r_A 189 ---TEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAF 219 (266)
T ss_dssp ---HHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHH
T ss_pred ---HHHHHHHHHH-----cCCCEEEeCCCCCHHHHHHHH
Confidence 3334444332 2456888999995 8887764
No 56
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.59 E-value=0.0011 Score=59.16 Aligned_cols=169 Identities=18% Similarity=0.156 Sum_probs=101.9
Q ss_pred Eeeee--cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 60 VSPSI--LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 60 IsPSI--l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
-|||- ++.| .+..+..+.++++|+++||+=--++.|- -+++.++++|+.+++|+-.-=.+-+|.+ ++....+
T Consensus 61 asPs~g~i~~~-~~p~~~A~~y~~~GA~~isvltd~~~f~----Gs~~~l~~ir~~v~lPvl~kdfiid~~q-v~~A~~~ 134 (272)
T 3qja_A 61 ASPSAGALATI-ADPAKLAQAYQDGGARIVSVVTEQRRFQ----GSLDDLDAVRASVSIPVLRKDFVVQPYQ-IHEARAH 134 (272)
T ss_dssp -------------CHHHHHHHHHHTTCSEEEEECCGGGHH----HHHHHHHHHHHHCSSCEEEESCCCSHHH-HHHHHHT
T ss_pred CCCCCCccCCC-CCHHHHHHHHHHcCCCEEEEecChhhcC----CCHHHHHHHHHhCCCCEEECccccCHHH-HHHHHHc
Confidence 35553 3333 4566778889999999999743333331 1257889998888888764323333332 6667789
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~l 216 (246)
|||.|.+.........+.++++.+++.|+.+.+-++ ..++++..+. -+|+|-+ ++ .....|-+. ++.++++
T Consensus 135 GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~---t~ee~~~A~~~Gad~IGv---~~-r~l~~~~~d-l~~~~~l 206 (272)
T 3qja_A 135 GADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVH---TEQEADRALKAGAKVIGV---NA-RDLMTLDVD-RDCFARI 206 (272)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEE---ES-BCTTTCCBC-TTHHHHH
T ss_pred CCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcC---CHHHHHHHHHCCCCEEEE---CC-CcccccccC-HHHHHHH
Confidence 999999975543334577889999999999877663 3455555443 4777644 33 222333322 3334444
Q ss_pred HHHHHhcCCCCeEEEeCCCC-hhhhhhccc
Q 025927 217 RRMCLEKGVNPWIEVDGGVG-PKNAYKVPN 245 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~-~e~i~~l~~ 245 (246)
++..+ .+..+..-|||+ .++++++.+
T Consensus 207 ~~~v~---~~~pvVaegGI~t~edv~~l~~ 233 (272)
T 3qja_A 207 APGLP---SSVIRIAESGVRGTADLLAYAG 233 (272)
T ss_dssp GGGSC---TTSEEEEESCCCSHHHHHHHHH
T ss_pred HHhCc---ccCEEEEECCCCCHHHHHHHHH
Confidence 43332 245688899998 888887653
No 57
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.51 E-value=0.0024 Score=55.54 Aligned_cols=153 Identities=16% Similarity=0.192 Sum_probs=100.5
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEE---------EeccCcccchHHHHhcCC
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH---------LMIVEPEQRVPDFIKAGA 139 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvH---------LMV~~P~~~i~~~~~aga 139 (246)
...+.+..+.++++|+..+-+ | +++.|+++|+.+++|+-.- +++..-...++.+.++|+
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~----~--------~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGa 102 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRI----E--------GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGA 102 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE----E--------SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred cchHHHHHHHHHHCCCcEEEE----C--------CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCC
Confidence 456778888999999999886 1 5789999999999985210 122222245778899999
Q ss_pred CEEEEccCCc-ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCC--cccHHHHHHHHH
Q 025927 140 DIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQ--SFIESQVKKISD 215 (246)
Q Consensus 140 d~It~H~E~~-~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ--~F~~~~l~KI~~ 215 (246)
|.|.+-.-.. ....+.++++++|+.|+.++.-+. .++..+...+ -+|+|-+ ..-|+.+. .+.+ .++-+++
T Consensus 103 d~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~---t~eea~~a~~~Gad~Ig~--~~~g~t~~~~~~~~-~~~li~~ 176 (229)
T 3q58_A 103 DIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS---TVNEGISCHQKGIEFIGT--TLSGYTGPITPVEP-DLAMVTQ 176 (229)
T ss_dssp SEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS---SHHHHHHHHHTTCSEEEC--TTTTSSSSCCCSSC-CHHHHHH
T ss_pred CEEEECccccCChHHHHHHHHHHHHCCCEEEEecC---CHHHHHHHHhCCCCEEEe--cCccCCCCCcCCCC-CHHHHHH
Confidence 9997643211 123578899999999998887543 4566655544 3888742 22355322 2333 3344444
Q ss_pred HHHHHHhcCCCCeEEEeCCC-Chhhhhhccc
Q 025927 216 LRRMCLEKGVNPWIEVDGGV-GPKNAYKVPN 245 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~~ 245 (246)
+++ . +..+-..||| +.+++.++.+
T Consensus 177 l~~---~---~ipvIA~GGI~t~~d~~~~~~ 201 (229)
T 3q58_A 177 LSH---A---GCRVIAEGRYNTPALAANAIE 201 (229)
T ss_dssp HHT---T---TCCEEEESSCCSHHHHHHHHH
T ss_pred HHH---c---CCCEEEECCCCCHHHHHHHHH
Confidence 433 2 4568899999 5888887653
No 58
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=97.45 E-value=9.1e-05 Score=65.63 Aligned_cols=152 Identities=18% Similarity=0.227 Sum_probs=97.0
Q ss_pred CcEEeeeecccChhhHHHHHHHHHH-cCCCEEEeeeccCc-------ccCCCCCCHHHHhhcccCCCCCeeEEEe--ccC
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVEL-AGCDWIHVDVMDGR-------FVPNITIGPLVVDALRPVTDLPLDVHLM--IVE 126 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~-~g~d~lHiDIMDG~-------FVpN~tfgp~~I~~ir~~t~~plDvHLM--V~~ 126 (246)
+..+.+++.+.+...+.+..+.+++ +|+|.+.+.+..-+ |..+..+-.++++++|+.+++|+-+.+. +.+
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~ 177 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTD 177 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSC
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHH
Confidence 4568889998888889888999987 89999988765322 1112222267888888877889888775 235
Q ss_pred cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCccc
Q 025927 127 PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFI 206 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~ 206 (246)
+..+.+.+.++|+|.|++.-- . .|..+.+.|.- +.+. ....|+.|..+.
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~----~---------------~g~~i~~~~~~----~~~~--------~~~~g~~g~~~~ 226 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINT----L---------------MGVRFDLKTRQ----PILA--------NITGGLSGPAIK 226 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCC----E---------------EECCBCTTTCS----BSST--------TSCEEEESGGGH
T ss_pred HHHHHHHHHHcCCCEEEEeCC----C---------------cccccCcccCC----cccc--------CCCCcccCccch
Confidence 566677888889998887310 0 12222222221 0010 112356677666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhhhhhcc
Q 025927 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVP 244 (246)
Q Consensus 207 ~~~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l~ 244 (246)
+..++-++++++.. +..|.+.||| +.+.+.++.
T Consensus 227 ~~~~~~i~~i~~~~-----~ipvia~GGI~~~~d~~~~l 260 (311)
T 1ep3_A 227 PVALKLIHQVAQDV-----DIPIIGMGGVANAQDVLEMY 260 (311)
T ss_dssp HHHHHHHHHHHTTC-----SSCEEECSSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCEEEECCcCCHHHHHHHH
Confidence 66666666665532 4678899999 678777654
No 59
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.39 E-value=0.00027 Score=61.05 Aligned_cols=163 Identities=17% Similarity=0.117 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~ 150 (246)
++.+.++.++++|+++||+-=.|+.+-. -....+.++.+++.+++|+-+==-+.+|+. ++.+.++|||.|.+--+..
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~-~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~-~~~~l~~Gad~V~ig~~~l- 112 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASGGAGKMEH-FLEAFLRGADKVSINTAAV- 112 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCS-SCCCHHHHHHHGGGCCSCEEEESCCCSHHH-HHHHHHTTCSEECCSHHHH-
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCC-CcccHHHHHHHHHhCCCCEEEeCCCCCHHH-HHHHHHcCCCeeehhhHHh-
Confidence 4566788889999999997444543322 244578899999888888776555667766 6677789999998765532
Q ss_pred cccHHHHHHHHHHcCCc---EEEEEcC--------------C---CChHHHHHhhh-hcceEEEEeecCCCCCCcccHHH
Q 025927 151 TIHLHRTLNQIKDLGAK---AGVVLNP--------------A---TSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQ 209 (246)
Q Consensus 151 ~~~~~~~i~~Ik~~G~k---~GlAlnP--------------~---Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~ 209 (246)
.++..+.+..+..|.. +|+-..- . ++++..+.+.+ -+|.|.+.++.+.-..+.+.-+.
T Consensus 113 -~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g~~~~~ 191 (247)
T 3tdn_A 113 -ENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEM 191 (247)
T ss_dssp -HCTHHHHHHHHHHC-----------------------------------------------------------------
T ss_pred -hChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCCCCHHH
Confidence 2333333344445522 2332210 0 12222222222 27888888876532222222233
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhccc
Q 025927 210 VKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVPN 245 (246)
Q Consensus 210 l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~~ 245 (246)
++++++.. +..+..=|||+ .+++.++.+
T Consensus 192 ---~~~i~~~~-----~iPvia~GGI~~~~d~~~~~~ 220 (247)
T 3tdn_A 192 ---IRFVRPLT-----TLPIIASGGAGKMEHFLEAFL 220 (247)
T ss_dssp -------------------------------------
T ss_pred ---HHHHHHhC-----CCCEEEECCCCCHHHHHHHHH
Confidence 33333332 34577889997 888887754
No 60
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=97.36 E-value=0.00046 Score=60.75 Aligned_cols=94 Identities=12% Similarity=0.178 Sum_probs=71.8
Q ss_pred eecccChhhHHHHHHHHHHcC--CCE--EEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEE--eccCcccchHHHH
Q 025927 63 SILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHL--MIVEPEQRVPDFI 135 (246)
Q Consensus 63 SIl~aD~~~l~~~i~~l~~~g--~d~--lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHL--MV~~P~~~i~~~~ 135 (246)
=++++|+.++++.++.+++.+ ++| +|+++. ..+|++.+++|++. ..+++|.|+ +-..+..+++.+.
T Consensus 11 LivALD~~~~~~al~l~~~~~~~v~~~Kvg~~lf-------~~~G~~~v~~L~~~g~~iflDlK~~DI~nTv~~~~~~~~ 83 (239)
T 3tr2_A 11 VIVAIDAGTVEQARAQINPLTPELCHLKIGSILF-------TRYGPAFVEELMQKGYRIFLDLKFYDIPQTVAGACRAVA 83 (239)
T ss_dssp EEEECCCSSHHHHHHHHTTCCTTTCEEEEEHHHH-------HHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEeCCCCHHHHHHHHHHhCCcccEEEeCHHHH-------HhhCHHHHHHHHhcCCCEEEEecccccchHHHHHHHHHH
Confidence 367899999998888888765 667 598883 57899999999875 456899999 6777778899999
Q ss_pred hcCCCEEEEccCCcccccHHHHHHHHHHc
Q 025927 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDL 164 (246)
Q Consensus 136 ~agad~It~H~E~~~~~~~~~~i~~Ik~~ 164 (246)
+.|+|++|+|.-.- ..-+....+..++.
T Consensus 84 ~~gad~vTvh~~~G-~~~~~~a~~~~~~~ 111 (239)
T 3tr2_A 84 ELGVWMMNIHISGG-RTMMETVVNALQSI 111 (239)
T ss_dssp HTTCSEEEEEGGGC-HHHHHHHHHHHHTC
T ss_pred hCCCCEEEEeccCC-HHHHHHHHHHHHhc
Confidence 99999999998741 22234444445543
No 61
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=97.36 E-value=0.0003 Score=62.69 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=77.3
Q ss_pred eecccChhhHHHHHHHHHHcC--CCE--EEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEE--eccCcccchHHHH
Q 025927 63 SILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHL--MIVEPEQRVPDFI 135 (246)
Q Consensus 63 SIl~aD~~~l~~~i~~l~~~g--~d~--lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHL--MV~~P~~~i~~~~ 135 (246)
=++++|+.++++.++.+++.+ +++ +|++++ ..+|++.+++||+. ..+++|.++ +-.....+++.+.
T Consensus 30 LivALD~~~~~~al~l~~~l~~~v~~~KvG~~l~-------~~~G~~~v~~Lk~~g~~VflDlK~~DIpnTv~~a~~~~~ 102 (255)
T 3ldv_A 30 VIVALDYDNLADALAFVDKIDPSTCRLKVGKEMF-------TLFGPDFVRELHKRGFSVFLDLKFHDIPNTCSKAVKAAA 102 (255)
T ss_dssp EEEEECCSSHHHHHHHHTTSCGGGCEEEEEHHHH-------HHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHhCCcCcEEEeCHHHH-------HhhCHHHHHHHHhcCCCEEEEEecccchhHHHHHHHHHH
Confidence 367899999999888888764 456 777776 57899999999875 456899999 5666677888999
Q ss_pred hcCCCEEEEccCCcccccHHHHHHHHHHcCC----cEEEEEcCCCChHHH
Q 025927 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGA----KAGVVLNPATSLSAI 181 (246)
Q Consensus 136 ~agad~It~H~E~~~~~~~~~~i~~Ik~~G~----k~GlAlnP~Tpve~l 181 (246)
++|+|++|+|.-. ...-+...++..++.|. -.||.+-..++-+.+
T Consensus 103 ~~gaD~vTVh~~~-G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l 151 (255)
T 3ldv_A 103 ELGVWMVNVHASG-GERMMAASREILEPYGKERPLLIGVTVLTSMESADL 151 (255)
T ss_dssp HTTCSEEEEEGGG-CHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHH
T ss_pred hcCCCEEEEeccC-CHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHH
Confidence 9999999999864 12224444554544432 234444444443343
No 62
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.20 E-value=0.0098 Score=50.70 Aligned_cols=158 Identities=13% Similarity=0.101 Sum_probs=106.4
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
..+-|.+-..|..++.+.++++.+.|++++.+-.-+ .-..+.++.+++ .++.+.+...+ ++ ..++...++
T Consensus 13 ~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~-------~~~~~~i~~~~~-~~~~~gag~vl-~~-d~~~~A~~~ 82 (207)
T 2yw3_A 13 SRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRT-------EKGLEALKALRK-SGLLLGAGTVR-SP-KEAEAALEA 82 (207)
T ss_dssp HCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSS-------THHHHHHHHHTT-SSCEEEEESCC-SH-HHHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hHHHHHHHHHhC-CCCEEEeCeEe-eH-HHHHHHHHc
Confidence 356777777788888899999999999999997432 123567888888 77777777643 44 567888899
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR 217 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr 217 (246)
|||.++.... + ..+++..++.|....+- -.|+-|...-.-.-+|+|-+ -| .+.+ .-++-++.++
T Consensus 83 GAd~v~~~~~-----d-~~v~~~~~~~g~~~i~G--~~t~~e~~~A~~~Gad~v~~---fp---a~~~--gG~~~lk~l~ 146 (207)
T 2yw3_A 83 GAAFLVSPGL-----L-EEVAALAQARGVPYLPG--VLTPTEVERALALGLSALKF---FP---AEPF--QGVRVLRAYA 146 (207)
T ss_dssp TCSEEEESSC-----C-HHHHHHHHHHTCCEEEE--ECSHHHHHHHHHTTCCEEEE---TT---TTTT--THHHHHHHHH
T ss_pred CCCEEEcCCC-----C-HHHHHHHHHhCCCEEec--CCCHHHHHHHHHCCCCEEEE---ec---Cccc--cCHHHHHHHH
Confidence 9999976532 2 34677778888765443 34544444333335999877 33 2222 0134455555
Q ss_pred HHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 218 RMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 218 ~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
...+ +..+..=||||.+|+.++.+
T Consensus 147 ~~~~----~ipvvaiGGI~~~n~~~~l~ 170 (207)
T 2yw3_A 147 EVFP----EVRFLPTGGIKEEHLPHYAA 170 (207)
T ss_dssp HHCT----TCEEEEBSSCCGGGHHHHHT
T ss_pred hhCC----CCcEEEeCCCCHHHHHHHHh
Confidence 5543 35688899999999988754
No 63
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.86 E-value=0.046 Score=46.88 Aligned_cols=159 Identities=14% Similarity=0.086 Sum_probs=102.7
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc-CCCCCeeEEEeccCcccchHHHHh
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP-VTDLPLDVHLMIVEPEQRVPDFIK 136 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~-~t~~plDvHLMV~~P~~~i~~~~~ 136 (246)
..+-|-+=..|..++.+.++.+.+.|++++.+..-+ .-+.+.++.+++ +.++.+.+.- +-++ ..++...+
T Consensus 16 ~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~vgagt-vi~~-d~~~~A~~ 86 (214)
T 1wbh_A 16 GPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVPEAIVGAGT-VLNP-QQLAEVTE 86 (214)
T ss_dssp CSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCTTSEEEEES-CCSH-HHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCcCCEEeeCE-EEEH-HHHHHHHH
Confidence 345666666788888899999999999999999432 234567777755 3344444444 3343 45778889
Q ss_pred cCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHH
Q 025927 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (246)
Q Consensus 137 agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~l 216 (246)
+|||.++...+ + ..+++..+++|...-.- -.|+-|..+-+-.-+|+|-+ |..+..- -++-++.+
T Consensus 87 aGAd~v~~p~~-----d-~~v~~~~~~~g~~~i~G--~~t~~e~~~A~~~Gad~v~~------Fpa~~~g--G~~~lk~i 150 (214)
T 1wbh_A 87 AGAQFAISPGL-----T-EPLLKAATEGTIPLIPG--ISTVSELMLGMDYGLKEFKF------FPAEANG--GVKALQAI 150 (214)
T ss_dssp HTCSCEEESSC-----C-HHHHHHHHHSSSCEEEE--ESSHHHHHHHHHTTCCEEEE------TTTTTTT--HHHHHHHH
T ss_pred cCCCEEEcCCC-----C-HHHHHHHHHhCCCEEEe--cCCHHHHHHHHHCCCCEEEE------ecCcccc--CHHHHHHH
Confidence 99999977643 1 24677778888655333 35554544444445999888 3333321 13334444
Q ss_pred HHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+..++ +..+..=||||.+|++++.+
T Consensus 151 ~~~~~----~ipvvaiGGI~~~n~~~~l~ 175 (214)
T 1wbh_A 151 AGPFS----QVRFCPTGGISPANYRDYLA 175 (214)
T ss_dssp HTTCT----TCEEEEBSSCCTTTHHHHHT
T ss_pred hhhCC----CCeEEEECCCCHHHHHHHHh
Confidence 44332 45788899999999998764
No 64
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.78 E-value=0.033 Score=48.54 Aligned_cols=150 Identities=19% Similarity=0.169 Sum_probs=88.2
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCC--CCCCHHHHhhcccCCCCCe-eEEEeccCcccchHHHHhcCCCEEEEcc
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPN--ITIGPLVVDALRPVTDLPL-DVHLMIVEPEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN--~tfgp~~I~~ir~~t~~pl-DvHLMV~~P~~~i~~~~~agad~It~H~ 146 (246)
.+.+ +++.+ ++|+|++=+ .|.|. =...++..++|.+....+. -+=.. .+|+...+.+.+.+.|+|-+|=
T Consensus 29 t~~e-d~~a~-~~gaD~iGf-----If~~~SpR~V~~~~A~~i~~~~~~~~~~v~v~-v~~~ei~~~i~~~~ld~vQLHG 100 (228)
T 4aaj_A 29 KSLE-ELEIV-EKHADATGV-----VVNSNSKRRIPLEKAREIIENSAIPVFLVSTM-VGFSEWAMAIERTGAQYIQVHS 100 (228)
T ss_dssp CSHH-HHHHH-HTTCSEEEE-----ECSSSSTTBCCHHHHHHHHHHCSSCEEEEECC-CCHHHHHHHHHHHTCSEEEECS
T ss_pred CcHH-HHHHH-HcCCCEEEE-----EecCCCCCCCCHHHHHHHHHhhCCCCEEEecc-CchHHHHHHHHhccchheeccc
Confidence 4544 46654 579999876 35553 2456777777755433333 23333 3677777777788999999996
Q ss_pred CCcccccHHHHHHHHH-HcCCcEEEEEcCCC----ChHHHHHhh-----hhcceEEEEeecCCCCCCcccHHHHHHHHHH
Q 025927 147 EQSSTIHLHRTLNQIK-DLGAKAGVVLNPAT----SLSAIECVL-----DVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (246)
Q Consensus 147 E~~~~~~~~~~i~~Ik-~~G~k~GlAlnP~T----pve~l~~~l-----~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~l 216 (246)
+. .+ ..++.+| +.|+++==|+.-.+ +-+....++ ..+|++|+=+ +|..|+.|+-+.++.+..
T Consensus 101 ~E----~~-~~~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs--~GGtG~~fDW~~~~~~~~- 172 (228)
T 4aaj_A 101 NA----LP-QTIDTLKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDT--GAGSGKLHDLRVSSLVAR- 172 (228)
T ss_dssp CC----CH-HHHHHHHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC---------CCCHHHHHHHH-
T ss_pred cc----CH-HHHHHHhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCC--CCCCcCcCChHHHHHhhh-
Confidence 52 23 2455555 45777655565432 222222222 2489998876 788899999876655432
Q ss_pred HHHHHhcCCCCeEEEeCCCChhhhhhcc
Q 025927 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~l~ 244 (246)
+ ..+.+=||+|++|+.+.+
T Consensus 173 -----~----~p~iLAGGL~peNV~~Ai 191 (228)
T 4aaj_A 173 -----K----IPVIVAGGLNAENVEEVI 191 (228)
T ss_dssp -----H----SCEEEESSCCTTTHHHHH
T ss_pred -----c----CCeEEECCCCHHHHHHHH
Confidence 1 236689999999998764
No 65
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.72 E-value=0.037 Score=47.92 Aligned_cols=156 Identities=17% Similarity=0.139 Sum_probs=100.3
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc-CCCCCeeEEEeccCcccchHHHHhc
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP-VTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~-~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
.+-|=+-..|..++.+.++.+.+.|++++.+..-+ .-+.+.++.+++ +.++.+-+.- +-.+ ..++...++
T Consensus 18 ~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~l~vgaGt-vl~~-d~~~~A~~a 88 (224)
T 1vhc_A 18 KIVPVIALDNADDILPLADTLAKNGLSVAEITFRS-------EAAADAIRLLRANRPDFLIAAGT-VLTA-EQVVLAKSS 88 (224)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEES-CCSH-HHHHHHHHH
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccC-------chHHHHHHHHHHhCcCcEEeeCc-EeeH-HHHHHHHHC
Confidence 45565556788888899999999999999998432 234567777765 3344444443 2233 557788899
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcE--EEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKA--GVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~--GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
|||.+..... + ..+++..|++|... | -.|+-|..+-.-.-+|+|-+ |..+..- -++.++.
T Consensus 89 GAd~v~~p~~-----d-~~v~~~ar~~g~~~i~G----v~t~~e~~~A~~~Gad~vk~------Fpa~~~g--G~~~lk~ 150 (224)
T 1vhc_A 89 GADFVVTPGL-----N-PKIVKLCQDLNFPITPG----VNNPMAIEIALEMGISAVKF------FPAEASG--GVKMIKA 150 (224)
T ss_dssp TCSEEECSSC-----C-HHHHHHHHHTTCCEECE----ECSHHHHHHHHHTTCCEEEE------TTTTTTT--HHHHHHH
T ss_pred CCCEEEECCC-----C-HHHHHHHHHhCCCEEec----cCCHHHHHHHHHCCCCEEEE------eeCcccc--CHHHHHH
Confidence 9999955432 2 24567778888665 5 24544544433345999888 3332221 1344455
Q ss_pred HHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++..++ +..+..=||||.+|++++.+
T Consensus 151 l~~~~~----~ipvvaiGGI~~~N~~~~l~ 176 (224)
T 1vhc_A 151 LLGPYA----QLQIMPTGGIGLHNIRDYLA 176 (224)
T ss_dssp HHTTTT----TCEEEEBSSCCTTTHHHHHT
T ss_pred HHhhCC----CCeEEEECCcCHHHHHHHHh
Confidence 554442 35788899999999998764
No 66
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.69 E-value=0.0097 Score=51.03 Aligned_cols=150 Identities=17% Similarity=0.206 Sum_probs=95.2
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCC--CCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHH-HhcCCCEEEEccCCc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPN--ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDF-IKAGADIVSVHCEQS 149 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN--~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~-~~agad~It~H~E~~ 149 (246)
++++.+.++|+|++=+=. .|. =...++..++|.+. .....-|=+.|..+...+... .+++.|.|-+|=+.
T Consensus 13 eda~~a~~~GaD~iGfif-----~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~e- 86 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVF-----YPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHGEE- 86 (205)
T ss_dssp HHHHHHHHHTCSEEEEEC-----CTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECSCC-
T ss_pred HHHHHHHHcCCCEEEEEe-----cCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCCC-
Confidence 667888889999998863 232 13467777777442 233455667776655555544 55799999999642
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecC--CCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 025927 150 STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNP--GFGGQSFIESQVKKISDLRRMCLEKGVN 226 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~P--GfgGQ~F~~~~l~KI~~lr~l~~~~~~~ 226 (246)
.+ ..++.+|+ ++++=-++..... +.++.+..+ +|++|+=+-.| |..|+.|.-+.++++. . . .
T Consensus 87 ---~~-~~~~~l~~-~~~vika~~v~~~-~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~l~~~~-----~--~--~ 151 (205)
T 1nsj_A 87 ---PI-ELCRKIAE-RILVIKAVGVSNE-RDMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYR-----D--R--F 151 (205)
T ss_dssp ---CH-HHHHHHHT-TSEEEEEEEESSH-HHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGGGTGGGG-----G--G--S
T ss_pred ---CH-HHHHHHhc-CCCEEEEEEcCCH-HHHHHHHHcCCCEEEECCCCCCCCCCCCccCHHHHHhhh-----c--C--C
Confidence 23 24455542 5565555554432 233332222 89999987655 7789999987764321 1 1 2
Q ss_pred CeEEEeCCCChhhhhhcc
Q 025927 227 PWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 227 ~~I~VDGGI~~e~i~~l~ 244 (246)
..+.+=||+|++|+.+.+
T Consensus 152 ~p~~LAGGL~peNV~~ai 169 (205)
T 1nsj_A 152 RYLVLSGGLNPENVRSAI 169 (205)
T ss_dssp SCEEEESSCCTTTHHHHH
T ss_pred CcEEEECCCCHHHHHHHH
Confidence 347789999999997653
No 67
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=96.68 E-value=0.02 Score=50.97 Aligned_cols=180 Identities=16% Similarity=0.268 Sum_probs=112.2
Q ss_pred CCcEEeeeecccChhhHHHHHHHHHHcCCCEEEe-----eeccCcccC-----------CCCC---CHH-HHhhcc---c
Q 025927 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV-----DVMDGRFVP-----------NITI---GPL-VVDALR---P 112 (246)
Q Consensus 56 ~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHi-----DIMDG~FVp-----------N~tf---gp~-~I~~ir---~ 112 (246)
+.+.++++.+.-| .+.++.+.+.|+..+-+ +=..|+.-| .+.| |.+ +++.++ +
T Consensus 15 nPi~~Aag~~~~~----~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 90 (314)
T 2e6f_A 15 NPFMNAAGVLCST----EEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHD 90 (314)
T ss_dssp SSEEECTTSSCSS----HHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCC
T ss_pred CCcEECCCCCCCC----HHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhh
Confidence 4677777665434 24467778888887643 101222111 1222 222 233343 3
Q ss_pred CCCCCeeEEEeccCcccchHH---HHhcCCC---EEEEccCC--c--------ccccHHHHHHHHHHc-CCcEEEEEcCC
Q 025927 113 VTDLPLDVHLMIVEPEQRVPD---FIKAGAD---IVSVHCEQ--S--------STIHLHRTLNQIKDL-GAKAGVVLNPA 175 (246)
Q Consensus 113 ~t~~plDvHLMV~~P~~~i~~---~~~agad---~It~H~E~--~--------~~~~~~~~i~~Ik~~-G~k~GlAlnP~ 175 (246)
.++.|+-+-++-.+++.|.+. +.++|+| .|-+|.-. . ..+.+.++++.+|+. ++.+.+=+.|+
T Consensus 91 ~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 91 YSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC
T ss_pred cCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 357899999998888877764 4556889 99998731 0 112346788888876 78888888888
Q ss_pred CChHHHHHhhhh------cceEEEEe-------ecC--------------CCCCCcccHHHHHHHHHHHHHHHhcCCCCe
Q 025927 176 TSLSAIECVLDV------VDLVLIMS-------VNP--------------GFGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 176 Tpve~l~~~l~~------vD~VLvMs-------V~P--------------GfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
...+.+.++... +|.|.+-. +++ |+.|.+..|..++-++++++..+ ++.
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~----~ip 246 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCP----DKL 246 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCT----TSE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcC----CCC
Confidence 776666554422 88886532 221 44566666777888887777641 467
Q ss_pred EEEeCCCC-hhhhhhc
Q 025927 229 IEVDGGVG-PKNAYKV 243 (246)
Q Consensus 229 I~VDGGI~-~e~i~~l 243 (246)
|...|||+ .+.+.++
T Consensus 247 vi~~GGI~~~~da~~~ 262 (314)
T 2e6f_A 247 VFGCGGVYSGEDAFLH 262 (314)
T ss_dssp EEEESSCCSHHHHHHH
T ss_pred EEEECCCCCHHHHHHH
Confidence 88999996 6666654
No 68
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.58 E-value=0.0041 Score=53.26 Aligned_cols=160 Identities=12% Similarity=0.066 Sum_probs=91.7
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccc
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSST 151 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~ 151 (246)
..+.++.++++|+|++|+==+++.+- ......+.++.++ .+++|+-+==-+.+++ .++.+.++|||.|.+--.. .
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~-~~~~~~~~Gad~V~lg~~~--l 106 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIE-NSGENLPVLEKLS-EFAEHIQIGGGIRSLD-YAEKLRKLGYRRQIVSSKV--L 106 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHH-CCCTTHHHHHHGG-GGGGGEEEESSCCSHH-HHHHHHHTTCCEEEECHHH--H
T ss_pred HHHHHHHHHHcCCCEEEEeccccccc-CCchhHHHHHHHH-hcCCcEEEECCCCCHH-HHHHHHHCCCCEEEECchH--h
Confidence 44557777889999999832333221 1233467788887 5566654433344444 4667788999999775543 2
Q ss_pred ccHHHHHHHHHHcCCcEEEEEcCC---------------CChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 152 IHLHRTLNQIKDLGAKAGVVLNPA---------------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 152 ~~~~~~i~~Ik~~G~k~GlAlnP~---------------Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
.++.. +..+++.|-++-+.+.+. ++.+..+.+.+. ++.|.+.++...-..+.+. ++.+++
T Consensus 107 ~~p~~-~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~---~~~i~~ 182 (241)
T 1qo2_A 107 EDPSF-LKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQEHD---FSLTKK 182 (241)
T ss_dssp HCTTH-HHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTCCCC---HHHHHH
T ss_pred hChHH-HHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCCcCC---HHHHHH
Confidence 23322 333366663333444431 344444454443 8999998765421112233 444555
Q ss_pred HHHHHHhcCCCCeEEEeCCCCh-hhhhhccc
Q 025927 216 LRRMCLEKGVNPWIEVDGGVGP-KNAYKVPN 245 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~~ 245 (246)
+++.. +..+-+=|||+. +++.++.+
T Consensus 183 l~~~~-----~iPvia~GGI~~~~d~~~~~~ 208 (241)
T 1qo2_A 183 IAIEA-----EVKVLAAGGISSENSLKTAQK 208 (241)
T ss_dssp HHHHH-----TCEEEEESSCCSHHHHHHHHH
T ss_pred HHHhc-----CCcEEEECCCCCHHHHHHHHh
Confidence 55543 245777899995 88887753
No 69
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=96.53 E-value=0.0063 Score=54.43 Aligned_cols=115 Identities=14% Similarity=0.046 Sum_probs=64.9
Q ss_pred HHHHHHHHcCCCEEEe-e---eccCcccCC-CCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCC
Q 025927 74 EQVKAVELAGCDWIHV-D---VMDGRFVPN-ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHi-D---IMDG~FVpN-~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~ 148 (246)
+.++.++++|+++||+ | ..+..|-.. ..-.++.++.+++.+++|+-+-.-+.. ...++.+.++|||.|. -.+.
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~-~~~~ 109 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGH-IVEARVLEAMGVDYID-ESEV 109 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTC-HHHHHHHHHHTCSEEE-ECTT
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccc-hHHHHHHHHCCCCEEE-Eecc
Confidence 5677788899999974 4 123333211 122478999998877888766543322 3445677789999996 2332
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEE
Q 025927 149 SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 149 ~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLv 193 (246)
....++.+.++ .++.|+.+++... ++-+....+-.-+|+|.+
T Consensus 110 l~~~~~~~~i~-~~~~g~~v~~~~~--~~~e~~~a~~~Gad~V~~ 151 (305)
T 2nv1_A 110 LTPADEEFHLN-KNEYTVPFVCGCR--DLGEATRRIAEGASMLRT 151 (305)
T ss_dssp SCCSCSSCCCC-GGGCSSCEEEEES--SHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHH-HhccCCcEEEEeC--CHHHHHHHHHCCCCEEEe
Confidence 11222222333 3467888777654 333333332234787666
No 70
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.42 E-value=0.15 Score=45.00 Aligned_cols=157 Identities=17% Similarity=0.250 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~ 150 (246)
+..+..+..+++ +..|=+ ..|.+|. .=+++.++++|+.+++|+-.-=.+.+|.. +.....+|||.|.+-.-...
T Consensus 62 ~~~~iA~~y~~~-A~~IsV-lTd~~~F---~gs~~dL~~ir~~v~lPvLrKDfi~~~~q-i~ea~~~GAD~ilLi~a~l~ 135 (251)
T 1i4n_A 62 SLEDFIRMYDEL-ADAISI-LTEKHYF---KGDPAFVRAARNLTCRPILAKDFYIDTVQ-VKLASSVGADAILIIARILT 135 (251)
T ss_dssp CHHHHHHHHHHH-CSEEEE-ECCCSSS---CCCTHHHHHHHTTCCSCEEEECCCCSTHH-HHHHHHTTCSEEEEEGGGSC
T ss_pred CHHHHHHHHHHh-CCceEE-Eeccccc---CCCHHHHHHHHHhCCCCEEEeeCCCCHHH-HHHHHHcCCCEEEEecccCC
Confidence 444445555555 555443 3577773 44778999999988888754434456664 55678899999988766433
Q ss_pred cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--cceEEEEeecC-CCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 151 TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLVLIMSVNP-GFGGQSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 151 ~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~--vD~VLvMsV~P-GfgGQ~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
...+..+++.+++.|+.+=+=++ ..++++..+.. .|+| +|++ +..+ |..+ ++...++.+.++ .+.
T Consensus 136 ~~~l~~l~~~a~~lGl~~lvEv~---~~eE~~~A~~l~g~~iI---Ginnr~l~t--~~~d-~~~~~~l~~~ip---~~~ 203 (251)
T 1i4n_A 136 AEQIKEIYEAAEELGMDSLVEVH---SREDLEKVFSVIRPKII---GINTRDLDT--FEIK-KNVLWELLPLVP---DDT 203 (251)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC---SHHHHHHHHTTCCCSEE---EEECBCTTT--CCBC-TTHHHHHGGGSC---TTS
T ss_pred HHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHhcCCCCEE---EEeCccccc--CCCC-HHHHHHHHHhCC---CCC
Confidence 34688999999999988877766 56666665543 5644 3443 4333 3322 333333333333 234
Q ss_pred eEEEeCCCC-hhhhhhccc
Q 025927 228 WIEVDGGVG-PKNAYKVPN 245 (246)
Q Consensus 228 ~I~VDGGI~-~e~i~~l~~ 245 (246)
.+-.-|||+ .+.++.+.+
T Consensus 204 ~vIaEsGI~t~edv~~~~~ 222 (251)
T 1i4n_A 204 VVVAESGIKDPRELKDLRG 222 (251)
T ss_dssp EEEEESCCCCGGGHHHHTT
T ss_pred EEEEeCCCCCHHHHHHHHH
Confidence 455599996 888877754
No 71
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.33 E-value=0.042 Score=48.71 Aligned_cols=126 Identities=13% Similarity=0.204 Sum_probs=83.1
Q ss_pred CCCeeEEEeccCcccchHHH---HhcCCC-EEEEccCC--------c--ccccHHHHHHHHHHc-CCcEEEEEcCCCChH
Q 025927 115 DLPLDVHLMIVEPEQRVPDF---IKAGAD-IVSVHCEQ--------S--STIHLHRTLNQIKDL-GAKAGVVLNPATSLS 179 (246)
Q Consensus 115 ~~plDvHLMV~~P~~~i~~~---~~agad-~It~H~E~--------~--~~~~~~~~i~~Ik~~-G~k~GlAlnP~Tpve 179 (246)
+.|+-+-++-.+++.|.+.. .++|+| .|-+|.-+ . ..+.+.++++.+|+. ++.+.+=+.|+...+
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~ 172 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLV 172 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 68889999988888776644 567999 99998731 0 112346788888876 677888888887666
Q ss_pred HHHHhhh-----hcceEEEE-------eecC--------------CCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeC
Q 025927 180 AIECVLD-----VVDLVLIM-------SVNP--------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG 233 (246)
Q Consensus 180 ~l~~~l~-----~vD~VLvM-------sV~P--------------GfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDG 233 (246)
.+..+.. -+|.|.+- .+++ |+.|.+..|..++-++++++.. +-++.|...|
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~---~~~ipvi~~G 249 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRL---KPEIQIIGTG 249 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTS---CTTSEEEEES
T ss_pred HHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhc---CCCCCEEEEC
Confidence 6544332 27888762 2321 3346666666676666665543 2246789999
Q ss_pred CC-Chhhhhhc
Q 025927 234 GV-GPKNAYKV 243 (246)
Q Consensus 234 GI-~~e~i~~l 243 (246)
|| +.+.+.++
T Consensus 250 GI~~~~da~~~ 260 (311)
T 1jub_A 250 GIETGQDAFEH 260 (311)
T ss_dssp SCCSHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 99 45666553
No 72
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.18 E-value=0.13 Score=43.95 Aligned_cols=146 Identities=14% Similarity=0.142 Sum_probs=93.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCC--CCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHH-HhcCCCEEEEccCCc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPN--ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDF-IKAGADIVSVHCEQS 149 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN--~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~-~~agad~It~H~E~~ 149 (246)
++++.+.++|+|++=+=. .|. =...++..++|.+. .....-|=+.|..+...+... ..++.|.|-+|=+.
T Consensus 12 eda~~a~~~GaD~iGfif-----~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~e- 85 (203)
T 1v5x_A 12 EDALLAEALGAFALGFVL-----APGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEE- 85 (203)
T ss_dssp HHHHHHHHHTCSEEEEEC-----CTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECSCC-
T ss_pred HHHHHHHHcCCCEEEEEe-----cCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCCC-
Confidence 667888899999998863 232 13467777777442 233455667776655555544 56899999999652
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEcCCC--ChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 150 STIHLHRTLNQIKDLGAKAGVVLNPAT--SLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~~G~k~GlAlnP~T--pve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
.+ ..++.+++ |+++=-++.... ++ .+..|- +|++|+=+-. |-.|+.|.-+.++++ + .. ..
T Consensus 86 ---~~-~~~~~l~~-~~~vika~~v~~~~~l-~~~~~~--~d~~LlD~~~-gGtG~~fdW~~l~~~-----~-~~---~~ 147 (203)
T 1v5x_A 86 ---PP-EWAEAVGR-FYPVIKAFPLEGPARP-EWADYP--AQALLLDGKR-PGSGEAYPRAWAKPL-----L-AT---GR 147 (203)
T ss_dssp ---CH-HHHHHHTT-TSCEEEEEECSSSCCG-GGGGSS--CSEEEEECSS-TTSCCCCCGGGGHHH-----H-HT---TS
T ss_pred ---CH-HHHHHhcc-CCCEEEEEEcCChHhh-hhhhcC--CCEEEEcCCC-CCCCCccCHHHHHhh-----h-cc---CC
Confidence 23 23444432 566655555443 34 333332 8999877643 778999998877542 1 11 12
Q ss_pred eEEEeCCCChhhhhhc
Q 025927 228 WIEVDGGVGPKNAYKV 243 (246)
Q Consensus 228 ~I~VDGGI~~e~i~~l 243 (246)
.+.+=||+|++|+.+.
T Consensus 148 p~~LAGGL~peNV~~a 163 (203)
T 1v5x_A 148 RVILAGGIAPENLEEV 163 (203)
T ss_dssp CEEECSSCCSTTHHHH
T ss_pred cEEEECCCCHHHHHHH
Confidence 4778999999999764
No 73
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.12 E-value=0.19 Score=45.76 Aligned_cols=147 Identities=13% Similarity=0.143 Sum_probs=94.0
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcc------cCCCCCCHHHHhhcccC-CCCCeeEEEeccCc----ccchHHHH
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRF------VPNITIGPLVVDALRPV-TDLPLDVHLMIVEP----EQRVPDFI 135 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~F------VpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P----~~~i~~~~ 135 (246)
.+.....+-++.|.++|+|.|=+=--||-+ .|...=..+.++++++. .+.++- +|. .| .++++...
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~--~l~-~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIA--TLL-LPGIGSVHDLKNAY 103 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEE--EEE-CBTTBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEE--EEe-cCCcccHHHHHHHH
Confidence 344555567788889999987663223322 33333234667777653 344443 341 33 67888889
Q ss_pred hcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEE--cCCCChHHHHHhhhh-----cceEEEEeecCCCCCCcccHH
Q 025927 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL--NPATSLSAIECVLDV-----VDLVLIMSVNPGFGGQSFIES 208 (246)
Q Consensus 136 ~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAl--nP~Tpve~l~~~l~~-----vD~VLvMsV~PGfgGQ~F~~~ 208 (246)
++|+|.+.+..=....+.....+++.|+.|+++-..+ -+.|+.+.+..+... +|.|-+. +-.|-..-..
T Consensus 104 ~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~----DT~G~~~P~~ 179 (345)
T 1nvm_A 104 QAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA----DSGGAMSMND 179 (345)
T ss_dssp HHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEE----CTTCCCCHHH
T ss_pred hCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEEC----CCcCccCHHH
Confidence 9999976654311112456788999999999998888 888898888877653 6766665 3344444445
Q ss_pred HHHHHHHHHHHH
Q 025927 209 QVKKISDLRRMC 220 (246)
Q Consensus 209 ~l~KI~~lr~l~ 220 (246)
+.+.|+.+|+..
T Consensus 180 v~~lv~~l~~~~ 191 (345)
T 1nvm_A 180 IRDRMRAFKAVL 191 (345)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 566677777765
No 74
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.09 E-value=0.0056 Score=55.54 Aligned_cols=118 Identities=16% Similarity=0.181 Sum_probs=66.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeec-----cCcccCC--CCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCC
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVM-----DGRFVPN--ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGAD 140 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIM-----DG~FVpN--~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad 140 (246)
|+... ++.+..+++|++.+= +- |-+|-.. ..-.++.|+++|+.+++|+-+=.-+.. ...++.+.++|||
T Consensus 27 d~~~~-e~A~~ye~~GA~~ls--vLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~-ide~qil~aaGAD 102 (297)
T 4adt_A 27 DVKNV-EQAKIAEKAGAIGVM--ILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGH-FVEAQILEELKVD 102 (297)
T ss_dssp EESSH-HHHHHHHHHTCSEEE--ECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTC-HHHHHHHHHTTCS
T ss_pred CCCcH-HHHHHHHHcCCCEEE--EecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCc-HHHHHHHHHcCCC
Confidence 44444 567899999999853 33 5444432 233699999999988888754332222 3445566789999
Q ss_pred EEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh-hhcceEEEE
Q 025927 141 IVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL-DVVDLVLIM 194 (246)
Q Consensus 141 ~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l-~~vD~VLvM 194 (246)
.| -..+. ..+..+++.+++.+...-+.... +.+++....+ .-+|+|-+-
T Consensus 103 ~I-d~s~~---~~~~~li~~i~~~~~g~~vvv~v-~~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 103 ML-DESEV---LTMADEYNHINKHKFKTPFVCGC-TNLGEALRRISEGASMIRTK 152 (297)
T ss_dssp EE-EEETT---SCCSCSSCCCCGGGCSSCEEEEE-SSHHHHHHHHHHTCSEEEEC
T ss_pred EE-EcCCC---CCHHHHHHHHHhcCCCCeEEEEe-CCHHHHHHHHhCCCCEEEEC
Confidence 99 33331 12234566667643222223333 3444444444 347876544
No 75
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.97 E-value=0.016 Score=53.98 Aligned_cols=105 Identities=22% Similarity=0.264 Sum_probs=64.6
Q ss_pred cchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCc-
Q 025927 129 QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQS- 204 (246)
Q Consensus 129 ~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~- 204 (246)
..++.+.++|+|.|++|...-....+.+.++++|+. ++.+.+- +..| .+..+.+.+ -+|.|.| ++.||.....
T Consensus 103 e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G-~V~T-~e~A~~a~~aGaD~I~V-g~g~G~~~~tr 179 (361)
T 3r2g_A 103 QRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAG-NVAT-YAGADYLASCGADIIKA-GIGGGSVCSTR 179 (361)
T ss_dssp HHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEE-EECS-HHHHHHHHHTTCSEEEE-CCSSSSCHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEc-CcCC-HHHHHHHHHcCCCEEEE-cCCCCcCcccc
Confidence 567888999999999976431123456789999987 4444331 3344 455555554 4999998 7777653110
Q ss_pred -----ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhc
Q 025927 205 -----FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (246)
Q Consensus 205 -----F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l 243 (246)
-.| .+..|.++.+. .. .|..||||+ .+.+.+.
T Consensus 180 ~~~g~g~p-~l~aI~~~~~~---~~---PVIAdGGI~~~~di~kA 217 (361)
T 3r2g_A 180 IKTGFGVP-MLTCIQDCSRA---DR---SIVADGGIKTSGDIVKA 217 (361)
T ss_dssp HHHCCCCC-HHHHHHHHTTS---SS---EEEEESCCCSHHHHHHH
T ss_pred ccCCccHH-HHHHHHHHHHh---CC---CEEEECCCCCHHHHHHH
Confidence 122 45555544332 11 688999996 6666554
No 76
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.91 E-value=0.21 Score=43.61 Aligned_cols=156 Identities=15% Similarity=0.145 Sum_probs=104.0
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhc
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
.+-|=+-.-|.....+.++.|.+.|++++-+..-+ | -+.+.|+++++. .+..+-+- -|-+ ...++..+++
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t----~---~a~e~I~~l~~~~~~~~iGaG-TVlt-~~~a~~Ai~A 105 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRS----D---AAVEAIRLLRQAQPEMLIGAG-TILN-GEQALAAKEA 105 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS----T---THHHHHHHHHHHCTTCEEEEE-CCCS-HHHHHHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCC----C---CHHHHHHHHHHhCCCCEEeEC-CcCC-HHHHHHHHHc
Confidence 57777888888999999999999999999986553 2 245788888773 33322222 2444 3457788999
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcE--EEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKA--GVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~--GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
||+.|.-... + ..+++.++++|+.. |+. ||-|...-+-.-+|+|=+. |+ +.+ .-.+-|+.
T Consensus 106 GA~fIvsP~~-----~-~~vi~~~~~~gi~~ipGv~----TptEi~~A~~~Gad~vK~F---Pa---~~~--gG~~~lka 167 (232)
T 4e38_A 106 GATFVVSPGF-----N-PNTVRACQEIGIDIVPGVN----NPSTVEAALEMGLTTLKFF---PA---EAS--GGISMVKS 167 (232)
T ss_dssp TCSEEECSSC-----C-HHHHHHHHHHTCEEECEEC----SHHHHHHHHHTTCCEEEEC---ST---TTT--THHHHHHH
T ss_pred CCCEEEeCCC-----C-HHHHHHHHHcCCCEEcCCC----CHHHHHHHHHcCCCEEEEC---cC---ccc--cCHHHHHH
Confidence 9999965432 1 35788889988875 643 6666555554458988663 32 221 01344444
Q ss_pred HHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
++.-++ +..+..=|||+.+|+++..+
T Consensus 168 l~~p~p----~ip~~ptGGI~~~n~~~~l~ 193 (232)
T 4e38_A 168 LVGPYG----DIRLMPTGGITPSNIDNYLA 193 (232)
T ss_dssp HHTTCT----TCEEEEBSSCCTTTHHHHHT
T ss_pred HHHHhc----CCCeeeEcCCCHHHHHHHHH
Confidence 444332 46788999999999988654
No 77
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.90 E-value=0.14 Score=44.22 Aligned_cols=158 Identities=16% Similarity=0.058 Sum_probs=99.0
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc-CCCCCeeEEEeccCcccchHHHHhc
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP-VTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~-~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
.|-|=+-..|..++.+.++.+.+.|++++.+..-+ .-+.+.++.+++ +.++.+-+.- +-++ ..++...++
T Consensus 27 ~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~igagt-vl~~-d~~~~A~~a 97 (225)
T 1mxs_A 27 RILPVITIAREEDILPLADALAAGGIRTLEVTLRS-------QHGLKAIQVLREQRPELCVGAGT-VLDR-SMFAAVEAA 97 (225)
T ss_dssp SEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSS-------THHHHHHHHHHHHCTTSEEEEEC-CCSH-HHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCC-------ccHHHHHHHHHHhCcccEEeeCe-EeeH-HHHHHHHHC
Confidence 35565555688888899999999999999998432 223456776655 3355555554 3333 457788889
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR 217 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr 217 (246)
|||.++.... + ..+++..+++|...-+- -.||-|...-+-.-+|+|-+ |.++... -++-++.++
T Consensus 98 GAd~v~~p~~-----d-~~v~~~~~~~g~~~i~G--~~t~~e~~~A~~~Gad~vk~------FPa~~~~--G~~~lk~i~ 161 (225)
T 1mxs_A 98 GAQFVVTPGI-----T-EDILEAGVDSEIPLLPG--ISTPSEIMMGYALGYRRFKL------FPAEISG--GVAAIKAFG 161 (225)
T ss_dssp TCSSEECSSC-----C-HHHHHHHHHCSSCEECE--ECSHHHHHHHHTTTCCEEEE------TTHHHHT--HHHHHHHHH
T ss_pred CCCEEEeCCC-----C-HHHHHHHHHhCCCEEEe--eCCHHHHHHHHHCCCCEEEE------ccCcccc--CHHHHHHHH
Confidence 9999976533 2 24667778888654222 35554444333345899877 3311110 133444444
Q ss_pred HHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 218 RMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 218 ~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
..++ +..+..=||||.+|++++.+
T Consensus 162 ~~~~----~ipvvaiGGI~~~N~~~~l~ 185 (225)
T 1mxs_A 162 GPFG----DIRFCPTGGVNPANVRNYMA 185 (225)
T ss_dssp TTTT----TCEEEEBSSCCTTTHHHHHH
T ss_pred hhCC----CCeEEEECCCCHHHHHHHHh
Confidence 4332 46788899999999998754
No 78
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.83 E-value=0.093 Score=46.11 Aligned_cols=158 Identities=18% Similarity=0.144 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCC-HHHHhhcccCCCCCeeEEEec-----cCccc---chHHHHhc-CC
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG-PLVVDALRPVTDLPLDVHLMI-----VEPEQ---RVPDFIKA-GA 139 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg-p~~I~~ir~~t~~plDvHLMV-----~~P~~---~i~~~~~a-ga 139 (246)
-++++.++.++++|+|.+=+=+ .|......+ ..+++.+++. .+++.. .+++. +.+.+.++ |+
T Consensus 23 p~~~~~~~~l~~~Gad~ielg~---pr~~~~g~~~~~~~~~l~~~-----~~~~~pn~~~~~~~~~~~~f~~~a~~agg~ 94 (264)
T 1xm3_A 23 PSFDIQKEAVAVSESDILTFAV---RRMNIFEASQPNFLEQLDLS-----KYTLLPNTAGASTAEEAVRIARLAKASGLC 94 (264)
T ss_dssp SCHHHHHHHHHHHTCSEEEEET---TSSTTC-------CTTCCGG-----GSEEEEECTTCSSHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHcCCeEEEEcc---cccccCCCCHHHHHHHHHhc-----CCeEcCCccccCCHHHHHHHHHHHHHcCCC
Confidence 4556667889999999985554 355211222 2345555432 233323 44443 44444555 56
Q ss_pred CEEEEccCCcc---cccHHHHHHHHHHc---CCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHH
Q 025927 140 DIVSVHCEQSS---TIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKK 212 (246)
Q Consensus 140 d~It~H~E~~~---~~~~~~~i~~Ik~~---G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~K 212 (246)
+.|.+..=... .++...+++.+|++ |+.++....|++ +.++...+ -.|+|+.|....|-+ +.... .+.
T Consensus 95 ~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~--~~a~~~~~~gad~v~~~~~~~Gt~-~~~~~--~~~ 169 (264)
T 1xm3_A 95 DMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDV--VLARKLEELGVHAIMPGASPIGSG-QGILN--PLN 169 (264)
T ss_dssp SSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCH--HHHHHHHHHTCSCBEECSSSTTCC-CCCSC--HHH
T ss_pred CeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCH--HHHHHHHHhCCCEEEECCcccCCC-CCCCC--HHH
Confidence 67665421100 23456888889998 999986555543 45555443 488884433333322 11211 334
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhccc
Q 025927 213 ISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVPN 245 (246)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~~ 245 (246)
++++++. . +.-+.++|||+ .+++.++.+
T Consensus 170 l~~i~~~---~--~iPviv~gGI~t~eda~~~~~ 198 (264)
T 1xm3_A 170 LSFIIEQ---A--KVPVIVDAGIGSPKDAAYAME 198 (264)
T ss_dssp HHHHHHH---C--SSCBEEESCCCSHHHHHHHHH
T ss_pred HHHHHhc---C--CCCEEEEeCCCCHHHHHHHHH
Confidence 4555542 1 35688999996 899887643
No 79
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=95.81 E-value=0.068 Score=47.55 Aligned_cols=151 Identities=17% Similarity=0.153 Sum_probs=91.6
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCC--CCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT--IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~t--fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
.+...+.++++.+.+.|++.+++ ..|. -|.+. .=.++++.+++. ++.+.+..-.. ....++.+.++|++.+.+
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~--~gGe-~p~~~~~~~~~li~~i~~~-~~~i~~s~g~l-~~e~l~~L~~ag~~~v~i 158 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVL--QSGE-DPYXMPDVISDIVKEIKKM-GVAVTLSLGEW-PREYYEKWKEAGADRYLL 158 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE--EESC-CGGGTTHHHHHHHHHHHTT-SCEEEEECCCC-CHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEE--EeCC-CCCccHHHHHHHHHHHHhc-CceEEEecCCC-CHHHHHHHHHhCCCEEee
Confidence 46678888899998899998776 6776 13222 223455566654 33322222221 235678899999999998
Q ss_pred ccCCcc------------cccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHHHhhh-----hcceEEEEeecC--CC--
Q 025927 145 HCEQSS------------TIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIECVLD-----VVDLVLIMSVNP--GF-- 200 (246)
Q Consensus 145 H~E~~~------------~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~~~l~-----~vD~VLvMsV~P--Gf-- 200 (246)
-+|+.. .++..+.++.+++.|++++..+-++. ..+.+...+. .+|.|-+....| |-
T Consensus 159 ~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l 238 (348)
T 3iix_A 159 RHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPL 238 (348)
T ss_dssp CCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECCCCTTSTT
T ss_pred eeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeeecCCCCCc
Confidence 888641 12355677888999998877665444 4555554433 257777766665 32
Q ss_pred CCC--cccHHHHHHHHHHHHHHHh
Q 025927 201 GGQ--SFIESQVKKISDLRRMCLE 222 (246)
Q Consensus 201 gGQ--~F~~~~l~KI~~lr~l~~~ 222 (246)
... .-..+.++.++.+|.+++.
T Consensus 239 ~~~~~~~~~e~~~~~a~~R~~lp~ 262 (348)
T 3iix_A 239 ANEKKGDFTLTLKMVALTRILLPD 262 (348)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHSTT
T ss_pred ccCCCCCHHHHHHHHHHHHHHCCC
Confidence 111 1124455556666666654
No 80
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.68 E-value=0.2 Score=44.62 Aligned_cols=155 Identities=17% Similarity=0.207 Sum_probs=94.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcc--c-------------chHHHHhcC
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE--Q-------------RVPDFIKAG 138 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~--~-------------~i~~~~~ag 138 (246)
+.+...++.|+|.|-+= ++-.+-.+|=+..+++.+++.+++ -||.|+. |. . -|+.+.++|
T Consensus 12 ~~a~~A~~~GAdRIELc--~~L~~GGlTPS~g~i~~~~~~~~i--pv~vMIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~G 86 (256)
T 1twd_A 12 ECALTAQQNGADRVELC--AAPKEGGLTPSLGVLKSVRQRVTI--PVHPIIR-PRGGDFCYSDGEFAAILEDVRTVRELG 86 (256)
T ss_dssp HHHHHHHHTTCSEEEEC--BCGGGTCBCCCHHHHHHHHHHCCS--CEEEBCC-SSSSCSCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEc--CCcccCCCCCCHHHHHHHHHHcCC--ceEEEEC-CCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 34556678899998763 222233344456678888887665 4888985 62 1 256788899
Q ss_pred CCEEEEccCCc-ccccHHHHHHHHHHcCCcEEEEEcCC-----CChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHH
Q 025927 139 ADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPA-----TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVK 211 (246)
Q Consensus 139 ad~It~H~E~~-~~~~~~~~i~~Ik~~G~k~GlAlnP~-----Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~ 211 (246)
+|-+-|=+=+. ...|..++-+.+...+ ...+.+.-. .|.+.++.+++. +|.|| |- ||++=..+-++
T Consensus 87 adGvV~G~Lt~dg~iD~~~~~~Li~~a~-~~~vTFHRAfD~~~d~~~ale~L~~lG~~rIL--TS----G~~~~a~~g~~ 159 (256)
T 1twd_A 87 FPGLVTGVLDVDGNVDMPRMEKIMAAAG-PLAVTFHRAFDMCANPLYTLNNLAELGIARVL--TS----GQKSDALQGLS 159 (256)
T ss_dssp CSEEEECCBCTTSSBCHHHHHHHHHHHT-TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEE--EC----TTSSSTTTTHH
T ss_pred CCEEEEeeECCCCCcCHHHHHHHHHHhC-CCcEEEECchhccCCHHHHHHHHHHcCCCEEE--CC----CCCCCHHHHHH
Confidence 99988864211 1234444444444333 234555433 345666666654 88887 32 33333344444
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCChhhhhhcc
Q 025927 212 KISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 212 KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~ 244 (246)
.|+++.+..+ .+.|.+=||||.+|++++.
T Consensus 160 ---~L~~Lv~~a~-~i~Im~GgGv~~~Ni~~l~ 188 (256)
T 1twd_A 160 ---KIMELIAHRD-APIIMAGAGVRAENLHHFL 188 (256)
T ss_dssp ---HHHHHHTSSS-CCEEEEESSCCTTTHHHHH
T ss_pred ---HHHHHHHhhC-CcEEEecCCcCHHHHHHHH
Confidence 4555555555 7899999999999998874
No 81
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=95.57 E-value=0.11 Score=45.81 Aligned_cols=146 Identities=21% Similarity=0.241 Sum_probs=94.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
+.++++.++|.|.|=+=.-+|....|+ .+.+++||+ +++|+- ||..+|+.+. .|+|.+.|.-=-. .++
T Consensus 27 ~~l~~~~~~GtDaI~vGgs~gvt~~~~---~~~v~~ik~-~~~Pii--l~p~~~~~~~-----~gaD~il~pslln-~~~ 94 (235)
T 3w01_A 27 DDLDAICMSQTDAIMIGGTDDVTEDNV---IHLMSKIRR-YPLPLV--LEISNIESVM-----PGFDFYFVPTVLN-STD 94 (235)
T ss_dssp HHHHHHHTSSCSEEEECCSSCCCHHHH---HHHHHHHTT-SCSCEE--EECCCSTTCC-----TTCSEEEEEEETT-BSS
T ss_pred HHHHHHHHcCCCEEEECCcCCcCHHHH---HHHHHHhcC-cCCCEE--EecCCHHHhh-----cCCCEEEEccccC-CCC
Confidence 456667899999999988777654442 467888888 777754 6999997653 3999998873111 122
Q ss_pred HH----HHHHHHHHcCC-----cEEE----EEcCCCChHH---------HHHhhhhc---------ceEEEEeecCCCCC
Q 025927 154 LH----RTLNQIKDLGA-----KAGV----VLNPATSLSA---------IECVLDVV---------DLVLIMSVNPGFGG 202 (246)
Q Consensus 154 ~~----~~i~~Ik~~G~-----k~Gl----AlnP~Tpve~---------l~~~l~~v---------D~VLvMsV~PGfgG 202 (246)
+. .-.+.+|+.|. .+=. .+||+++++. .+....+. .+|-+-+ .|-.|
T Consensus 95 ~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~--sG~~g 172 (235)
T 3w01_A 95 VAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEY--SGIYG 172 (235)
T ss_dssp GGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEEC--TTSCC
T ss_pred cchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEec--CCCcC
Confidence 22 22456899997 5544 7999999884 55554442 5565554 56554
Q ss_pred CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhc
Q 025927 203 QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (246)
Q Consensus 203 Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l 243 (246)
.++.+++++ +.. .+..+.|=|||+ .+.++++
T Consensus 173 ---~~~~v~~ir---~~~----~~~pv~vGfGI~~~e~a~~~ 204 (235)
T 3w01_A 173 ---DVSKVQAVS---EHL----TETQLFYGGGISSEQQATEM 204 (235)
T ss_dssp ---CHHHHHHHH---TTC----SSSEEEEESCCCSHHHHHHH
T ss_pred ---CHHHHHHHH---Hhc----CCCCEEEECCcCCHHHHHHH
Confidence 455555544 332 135699999995 4555544
No 82
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.55 E-value=0.099 Score=46.00 Aligned_cols=161 Identities=14% Similarity=-0.045 Sum_probs=95.5
Q ss_pred cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEE
Q 025927 65 LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 65 l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
+..|+..+ .+.+++.|++++|+==.|+ + ..+.|+++.+.+.+|+.+-==+.. . -++.+. +||+.|.+
T Consensus 36 ~~~dp~~~---A~~~~~~Ga~~l~vvDL~~---~----n~~~i~~i~~~~~~pv~vgGGir~-~-~~~~~l-~Ga~~Vii 102 (260)
T 2agk_A 36 SQHPSSYY---AKLYKDRDVQGCHVIKLGP---N----NDDAAREALQESPQFLQVGGGIND-T-NCLEWL-KWASKVIV 102 (260)
T ss_dssp -CCCHHHH---HHHHHHTTCTTCEEEEESS---S----CHHHHHHHHHHSTTTSEEESSCCT-T-THHHHT-TTCSCEEE
T ss_pred cCCCHHHH---HHHHHHcCCCEEEEEeCCC---C----CHHHHHHHHhcCCceEEEeCCCCH-H-HHHHHh-cCCCEEEE
Confidence 34455555 5666888999999933344 2 367888887767777776444442 3 677888 99999998
Q ss_pred ccCCccccc-----HHHHHHHHHHcC-CcEEEEEcCC--------------------CCh-HHHHHhhhhcceEEEEeec
Q 025927 145 HCEQSSTIH-----LHRTLNQIKDLG-AKAGVVLNPA--------------------TSL-SAIECVLDVVDLVLIMSVN 197 (246)
Q Consensus 145 H~E~~~~~~-----~~~~i~~Ik~~G-~k~GlAlnP~--------------------Tpv-e~l~~~l~~vD~VLvMsV~ 197 (246)
=..+ ..+ |..+-+.+++.| -++-+++... .++ +.++.+-+.++.+++..+.
T Consensus 103 gs~a--~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~a~~il~t~i~ 180 (260)
T 2agk_A 103 TSWL--FTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKYTNEFLIHAAD 180 (260)
T ss_dssp CGGG--BCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTTCSEEEEEC--
T ss_pred CcHH--HhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHhcCEEEEEeec
Confidence 7664 356 766666666666 2332333210 235 6677776669999999988
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhcc
Q 025927 198 PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVP 244 (246)
Q Consensus 198 PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~ 244 (246)
.--..+.++-+.+++++ +..+. ..+..+..=|||+ .+.+.++.
T Consensus 181 ~dG~~~G~d~eli~~l~---~~~~~-~~~iPVIasGGi~s~ed~~~l~ 224 (260)
T 2agk_A 181 VEGLCGGIDELLVSKLF---EWTKD-YDDLKIVYAGGAKSVDDLKLVD 224 (260)
T ss_dssp -----CCCCHHHHHHHH---HHHTT-CSSCEEEEESCCCCTHHHHHHH
T ss_pred cccCcCCCCHHHHHHHH---Hhhcc-cCCceEEEeCCCCCHHHHHHHH
Confidence 73223344555555544 33310 0024577789985 46665553
No 83
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.47 E-value=0.24 Score=45.94 Aligned_cols=148 Identities=18% Similarity=0.239 Sum_probs=85.9
Q ss_pred HHHcCCCEEEeeeccCcccCCCCCCHH----HHhhcccCCCCCeeEEEecc-Cc--ccchHHHHhcCCCEEEEccCCccc
Q 025927 79 VELAGCDWIHVDVMDGRFVPNITIGPL----VVDALRPVTDLPLDVHLMIV-EP--EQRVPDFIKAGADIVSVHCEQSST 151 (246)
Q Consensus 79 l~~~g~d~lHiDIMDG~FVpN~tfgp~----~I~~ir~~t~~plDvHLMV~-~P--~~~i~~~~~agad~It~H~E~~~~ 151 (246)
.++.|+..+|. | +.++ .++.+|+.. ++-+-+++. +| ...++.+.++|+|.|.++.-....
T Consensus 67 A~aGGlg~i~~---------~--~s~e~~~~~i~~vk~~~--~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~ 133 (366)
T 4fo4_A 67 AQEGGIGFIHK---------N--MSIEQQAAQVHQVKISG--GLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHS 133 (366)
T ss_dssp HHTTCEEEECS---------S--SCHHHHHHHHHHHHTTT--SCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTS
T ss_pred HHcCCceEeec---------C--CCHHHHHHHHHHHHhcC--ceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 44567788873 1 2233 344455432 334444442 33 467888999999999885432112
Q ss_pred ccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCC-CCc----ccHHHHHHHHHHHHHHHhc
Q 025927 152 IHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFG-GQS----FIESQVKKISDLRRMCLEK 223 (246)
Q Consensus 152 ~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfg-GQ~----F~~~~l~KI~~lr~l~~~~ 223 (246)
..+.+.++++|+. ++.+.. ..-+..+..+.+.+. +|.|.+ ...||.- +.. .-...+.-|.++++..++.
T Consensus 134 ~~~~~~I~~ik~~~p~v~Vi~--G~v~t~e~A~~a~~aGAD~I~v-G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~ 210 (366)
T 4fo4_A 134 EGVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKV-GIGPGSICTTRIVTGVGVPQITAIADAAGVANEY 210 (366)
T ss_dssp HHHHHHHHHHHHHCTTCEEEE--EEECSHHHHHHHHHHTCSEEEE-CSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCCCceEe--eeeCCHHHHHHHHHcCCCEEEE-ecCCCCCCCcccccCcccchHHHHHHHHHHHhhc
Confidence 3455678888877 555433 123456666666654 999998 7778742 100 0012344455555554443
Q ss_pred CCCCeEEEeCCC-Chhhhhhcc
Q 025927 224 GVNPWIEVDGGV-GPKNAYKVP 244 (246)
Q Consensus 224 ~~~~~I~VDGGI-~~e~i~~l~ 244 (246)
+..+..|||| +.+++.+..
T Consensus 211 --~iPVIA~GGI~~~~di~kal 230 (366)
T 4fo4_A 211 --GIPVIADGGIRFSGDISKAI 230 (366)
T ss_dssp --TCCEEEESCCCSHHHHHHHH
T ss_pred --CCeEEEeCCCCCHHHHHHHH
Confidence 3568899999 567776543
No 84
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.10 E-value=0.25 Score=41.66 Aligned_cols=128 Identities=10% Similarity=0.053 Sum_probs=84.3
Q ss_pred CCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeecc-------CcccCCCCCCHHHHhhccc---CCCCCeeEEEec
Q 025927 55 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMD-------GRFVPNITIGPLVVDALRP---VTDLPLDVHLMI 124 (246)
Q Consensus 55 ~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMD-------G~FVpN~tfgp~~I~~ir~---~t~~plDvHLMV 124 (246)
+..++|+-|.++.--..+.+.++.+.+.|.+.+-+-..+ |+|. ...+.+..++++++ -.++.+-.|-..
T Consensus 7 k~~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~gl~i~~~~~~ 85 (262)
T 3p6l_A 7 KNGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVF-DFNLDAQTQKEIKELAASKGIKIVGTGVY 85 (262)
T ss_dssp HTTEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEE-STTCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hcCcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCcccccccccccc-cccCCHHHHHHHHHHHHHcCCeEEEEecc
Confidence 346789999998877789999999999999988776543 2221 23455656666654 356765554332
Q ss_pred cC-----cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCC----hHHHHHhhh
Q 025927 125 VE-----PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS----LSAIECVLD 186 (246)
Q Consensus 125 ~~-----P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp----ve~l~~~l~ 186 (246)
.+ -.+.++...+.|+++|.+|.- .+.+.++....++.|++.++=-.|... .+.+..+++
T Consensus 86 ~~~~~~~~~~~i~~A~~lGa~~v~~~~~---~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~ 153 (262)
T 3p6l_A 86 VAEKSSDWEKMFKFAKAMDLEFITCEPA---LSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAIS 153 (262)
T ss_dssp CCSSTTHHHHHHHHHHHTTCSEEEECCC---GGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHT
T ss_pred CCccHHHHHHHHHHHHHcCCCEEEecCC---HHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHH
Confidence 22 123455556679999999974 245677788888888887776666532 244555553
No 85
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.89 E-value=0.18 Score=46.09 Aligned_cols=139 Identities=19% Similarity=0.220 Sum_probs=94.4
Q ss_pred CCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeec--------c---CcccCCCCCCHHHHhhcccCCCCCeeEEE-
Q 025927 55 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVM--------D---GRFVPNITIGPLVVDALRPVTDLPLDVHL- 122 (246)
Q Consensus 55 ~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIM--------D---G~FVpN~tfgp~~I~~ir~~t~~plDvHL- 122 (246)
..+..+.+.|+..|...+.+..+.++++|+|.|=+-.- | |.+..+..|-.++++++++..++|+.+=+
T Consensus 55 ~~~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR 134 (350)
T 3b0p_A 55 PEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMR 134 (350)
T ss_dssp GGGCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEE
T ss_pred CCCCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEe
Confidence 33557888899889999999999999999998755431 2 12222333445677788876788988844
Q ss_pred -eccC------cccchHHHHhcCCCEEEEccCCc----ccc-------cHHHHHHHHHHcCCcEEEEEcCC-CChHHHHH
Q 025927 123 -MIVE------PEQRVPDFIKAGADIVSVHCEQS----STI-------HLHRTLNQIKDLGAKAGVVLNPA-TSLSAIEC 183 (246)
Q Consensus 123 -MV~~------P~~~i~~~~~agad~It~H~E~~----~~~-------~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~ 183 (246)
-..+ ...+++.+.++|+|.|++|.-.. +.. .-...+..+|+.--++=|..|-+ ++.+.++.
T Consensus 135 ~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~ 214 (350)
T 3b0p_A 135 LGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALF 214 (350)
T ss_dssp SCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHH
T ss_pred cCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHH
Confidence 2333 24556788889999999996421 000 01356777887532445666766 57888888
Q ss_pred hhhhcceEEE
Q 025927 184 VLDVVDLVLI 193 (246)
Q Consensus 184 ~l~~vD~VLv 193 (246)
++.-+|.|.+
T Consensus 215 ~l~GaD~V~i 224 (350)
T 3b0p_A 215 HLKRVDGVML 224 (350)
T ss_dssp HHTTSSEEEE
T ss_pred HHhCCCEEEE
Confidence 8888999887
No 86
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=94.79 E-value=0.18 Score=45.12 Aligned_cols=151 Identities=18% Similarity=0.126 Sum_probs=93.3
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCC----CCCCHHHHhhcccCCCCCeeEEEecc-CcccchHHHHhcCCCE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN----ITIGPLVVDALRPVTDLPLDVHLMIV-EPEQRVPDFIKAGADI 141 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN----~tfgp~~I~~ir~~t~~plDvHLMV~-~P~~~i~~~~~agad~ 141 (246)
.+...+.++++.+.+.|++.+++ ..|.. |. ...=.++++.+++..++ .+|+-.. -....++.+.++|++.
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l--~gGe~-p~~~~~~~~~~~l~~~ik~~~~i--~i~~s~g~~~~e~l~~L~~aG~~~ 165 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDL--TMGED-PYYYEDPNRFVELVQIVKEELGL--PIMISPGLMDNATLLKAREKGANF 165 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEE--EECCC-HHHHHSTHHHHHHHHHHHHHHCS--CEEEECSSCCHHHHHHHHHTTEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEE--eeCCC-CccccCHHHHHHHHHHHHhhcCc--eEEEeCCCCCHHHHHHHHHcCCCE
Confidence 46778888888888899999988 45542 21 11114566666654343 3443221 1335688999999999
Q ss_pred EEEccCCcc------------cccHHHHHHHHHHcCCcEEE--EEcCCCChHHHHHhhh-----hcceEEEEeecC--C-
Q 025927 142 VSVHCEQSS------------TIHLHRTLNQIKDLGAKAGV--VLNPATSLSAIECVLD-----VVDLVLIMSVNP--G- 199 (246)
Q Consensus 142 It~H~E~~~------------~~~~~~~i~~Ik~~G~k~Gl--AlnP~Tpve~l~~~l~-----~vD~VLvMsV~P--G- 199 (246)
+.+=+|+.. .++..+.++.+++.|++++. .+..+...+.+...+. .+|.|-+....| |
T Consensus 166 i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT 245 (350)
T 3t7v_A 166 LALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGT 245 (350)
T ss_dssp EECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECCCCTTS
T ss_pred EEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHHHHhCCCCEEEecceeeCCCC
Confidence 998888641 12355778888999987654 4444445555554433 267788888777 2
Q ss_pred -CCCC--cccHHHHHHHHHHHHHHHh
Q 025927 200 -FGGQ--SFIESQVKKISDLRRMCLE 222 (246)
Q Consensus 200 -fgGQ--~F~~~~l~KI~~lr~l~~~ 222 (246)
+... .=..+.++.++.+|-+++.
T Consensus 246 ~l~~~~~~~~~e~l~~ia~~Rl~lp~ 271 (350)
T 3t7v_A 246 PLEGFRDKSNLSELKIISVLRLMFPK 271 (350)
T ss_dssp TTTTCCCCCCCCHHHHHHHHHHHSTT
T ss_pred cCccCCCCChHHHHHHHHHHHHhCCC
Confidence 1221 1223566667777776654
No 87
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=94.76 E-value=0.047 Score=48.22 Aligned_cols=117 Identities=14% Similarity=0.050 Sum_probs=70.7
Q ss_pred HHHHHHHHHcCCCEEEee---eccCcccC--CCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccC
Q 025927 73 GEQVKAVELAGCDWIHVD---VMDGRFVP--NITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE 147 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiD---IMDG~FVp--N~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E 147 (246)
.+.++.+.++|++++|+= -.|..+-- ...-.++.++++++.+++|+-+-+-..+ ...++.+.++|+|.|..|.+
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~-~~~~~~~~~aGad~v~~~~~ 109 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGH-FVEAMILEAIGVDFIDESEV 109 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTC-HHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCC-HHHHHHHHHCCCCEEeeeCC
Confidence 466788889999999971 01100000 0112478899999888889765444433 56788888999999976654
Q ss_pred CcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEE
Q 025927 148 QSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIM 194 (246)
Q Consensus 148 ~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvM 194 (246)
. .+..+++.+++.+..+.+.....|+-+...-.-.-+|+|.+-
T Consensus 110 ~----~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~ 152 (297)
T 2zbt_A 110 L----TPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTK 152 (297)
T ss_dssp S----CCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEEC
T ss_pred C----ChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEc
Confidence 2 112234555655445566655455555443322348886553
No 88
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=94.55 E-value=0.33 Score=40.96 Aligned_cols=110 Identities=8% Similarity=0.060 Sum_probs=73.5
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCCCeeEE-EeccC----cc
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDLPLDVH-LMIVE----PE 128 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~plDvH-LMV~~----P~ 128 (246)
+++|+.+.++.--..+.+.++.+.+.|.+.+-+-.- ++ | ....+..++++++ -.++.+..+ .-... -.
T Consensus 17 ~~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~--~~-~-~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~ 92 (257)
T 3lmz_A 17 PFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDF--HL-P-LNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEID 92 (257)
T ss_dssp SSEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECTT--TS-C-TTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHH
T ss_pred ceEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEecc--cC-C-CCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHH
Confidence 467777877777678999999999999998877643 43 2 3456665666544 246654433 22111 12
Q ss_pred cchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEc
Q 025927 129 QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (246)
Q Consensus 129 ~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAln 173 (246)
+.++...+.|+.+|.+|.. .+.+.++.+..++.|++.++=-.
T Consensus 93 ~~i~~A~~lGa~~v~~~p~---~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 93 RAFDYAKRVGVKLIVGVPN---YELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp HHHHHHHHHTCSEEEEEEC---GGGHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHhCCCEEEecCC---HHHHHHHHHHHHHcCCEEEEecC
Confidence 3444455679999999975 35677888888888988766544
No 89
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.40 E-value=0.4 Score=45.06 Aligned_cols=112 Identities=20% Similarity=0.260 Sum_probs=66.6
Q ss_pred ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc-CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCC--CC
Q 025927 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFG--GQ 203 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~-G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfg--GQ 203 (246)
..+++.++++|+|.|.+-.-.-......+.++++|+. ++++.+. + -+..+..+.+++. +|.|.+ ...||-- ++
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g-~-V~t~e~A~~a~~aGAD~I~v-G~g~Gs~~~tr 222 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVG-N-VVTEEATKELIENGADGIKV-GIGPGSICTTR 222 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEE-E-ECSHHHHHHHHHTTCSEEEE-CC---------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEe-e-cCCHHHHHHHHHcCCCEEEE-eCCCCcCcccc
Confidence 6789999999999998732211122345778888876 7766541 1 1457777776654 999998 6667621 11
Q ss_pred c---ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhcc
Q 025927 204 S---FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVP 244 (246)
Q Consensus 204 ~---F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~ 244 (246)
. +-...+.-|.++++...+ .+..+..||||. .+.+.++.
T Consensus 223 ~~~g~g~p~~~al~~v~~~~~~--~~IPVIA~GGI~~~~di~kal 265 (400)
T 3ffs_A 223 IVAGVGVPQITAIEKCSSVASK--FGIPIIADGGIRYSGDIGKAL 265 (400)
T ss_dssp CCSCBCCCHHHHHHHHHHHHTT--TTCCEEEESCCCSHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHh--cCCCEEecCCCCCHHHHHHHH
Confidence 1 111234445555555433 346788999995 66766543
No 90
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.38 E-value=0.37 Score=40.41 Aligned_cols=155 Identities=9% Similarity=0.151 Sum_probs=83.7
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
..|+++-++.+. .+.++.+.+.|++++++=- ++.+- .+..+.+++.+.. ..+-+.+. ..++...++
T Consensus 4 y~It~~~~~~~~---~~~~~~a~~~Gv~~v~lr~------k~~~~-~~~~~~i~~l~~~-~~~~livn---d~~~~A~~~ 69 (210)
T 3ceu_A 4 IVVTTPTFFVEE---DKIITALFEEGLDILHLRK------PETPA-MYSERLLTLIPEK-YHRRIVTH---EHFYLKEEF 69 (210)
T ss_dssp EEECCSSCCTTH---HHHHHHHHHTTCCEEEECC------SSCCH-HHHHHHHHHSCGG-GGGGEEES---SCTTHHHHT
T ss_pred EEEeCcccccCH---HHHHHHHHHCCCCEEEEcc------CCCCH-HHHHHHHHHHHHH-hCCeEEEe---CCHHHHHHc
Confidence 346666554442 3778888899999999873 22221 1222333333211 22334443 334677889
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEee-----cCCCCCCcccHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSV-----NPGFGGQSFIESQVKK 212 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV-----~PGfgGQ~F~~~~l~K 212 (246)
|+|.|.+..|.. ... ...+..+|+... |+ +++..-..-+|+|.+=.+ .||. |..+-.+.+++
T Consensus 70 gadgvhl~~~~~--~~~-------~~~~~~ig~s~~--t~-~e~~~A~~GaDyv~~g~vf~t~sk~~~-~~~~g~~~l~~ 136 (210)
T 3ceu_A 70 NLMGIHLNARNP--SEP-------HDYAGHVSCSCH--SV-EEVKNRKHFYDYVFMSPIYDSISKVNY-YSTYTAEELRE 136 (210)
T ss_dssp TCSEEECCSSSC--SCC-------TTCCSEEEEEEC--SH-HHHHTTGGGSSEEEECCCC----------CCCCHHHHHH
T ss_pred CCCEEEECcccc--ccc-------cccCCEEEEecC--CH-HHHHHHhhCCCEEEECCcCCCCCCCCC-CCCCCHHHHHH
Confidence 999997665532 111 123666776654 33 334332256999987433 2342 34565555443
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 213 ISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+ ++.. ..+..+..=||||.+|+.++.+
T Consensus 137 ~---~~~~---~~~iPviaiGGI~~~nv~~~~~ 163 (210)
T 3ceu_A 137 A---QKAK---IIDSKVMALGGINEDNLLEIKD 163 (210)
T ss_dssp H---HHTT---CSSTTEEEESSCCTTTHHHHHH
T ss_pred H---HHhc---CCCCCEEEECCCCHHHHHHHHH
Confidence 3 2221 0134566789999999988753
No 91
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.33 E-value=0.34 Score=42.81 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=91.1
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeee-ccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDV-MDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDI-MDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
.+.....+-++.|++.|++.|=+=- -.+.|+|.+.--.+.++.+++..+.++-+|+ .+ ..-++...++|++.|.+-
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~--~n-~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV--PN-MKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC--SS-HHHHHHHHHTTCSEEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe--CC-HHHHHHHHHCCCCEEEEE
Confidence 3445555668888999998765411 1244566555445677888776567777776 45 356778899999988775
Q ss_pred cCCc--------------ccccHHHHHHHHHHcCCcEEEEEcC--------CCChHHHHHhhhh-----cceEEEEeecC
Q 025927 146 CEQS--------------STIHLHRTLNQIKDLGAKAGVVLNP--------ATSLSAIECVLDV-----VDLVLIMSVNP 198 (246)
Q Consensus 146 ~E~~--------------~~~~~~~~i~~Ik~~G~k~GlAlnP--------~Tpve~l~~~l~~-----vD~VLvMsV~P 198 (246)
.-+. ..+...+.++++|+.|+++...|.- .|+.+.+.++++. +|.|-+-.. -
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt-~ 178 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDT-I 178 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEET-T
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCC-C
Confidence 3111 1123456688899999998744442 3778888887752 677666531 2
Q ss_pred CCCCCcccHHHHHHHHHHHHHH
Q 025927 199 GFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 199 GfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
|. .--....+.++.+++..
T Consensus 179 G~---~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 179 GR---GTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp SC---CCHHHHHHHHHHHHTTS
T ss_pred CC---cCHHHHHHHHHHHHHhC
Confidence 43 22233445555555543
No 92
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=94.14 E-value=1.9 Score=37.96 Aligned_cols=129 Identities=12% Similarity=0.156 Sum_probs=81.2
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCccc------CCCCCCHHHHhhcccCCCCCeeEEEeccCccc----chHHHHh
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFV------PNITIGPLVVDALRPVTDLPLDVHLMIVEPEQ----RVPDFIK 136 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FV------pN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~----~i~~~~~ 136 (246)
-.+..+.++++.+.+.|++.+.+ .|+.+. |+...=.+.++.+++..++. .++++..+|.. .++.+.+
T Consensus 33 r~~e~i~~ei~~l~~~G~~ei~l--~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~-~ir~~~~~p~~l~~e~l~~l~~ 109 (304)
T 2qgq_A 33 RSIEDITREVEDLLKEGKKEIIL--VAQDTTSYGIDLYRKQALPDLLRRLNSLNGEF-WIRVMYLHPDHLTEEIISAMLE 109 (304)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEE--ECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSC-EEEECCCCGGGCCHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHCCCcEEEE--EeEcccccCCCCCcHHHHHHHHHHHHhcCCCc-EEEEeeeecccCCHHHHHHHHh
Confidence 45678889999998889887664 333221 11111245667776654443 46677678864 5777888
Q ss_pred cC--CCEEEEccCCcc------------cccHHHHHHHHHH--cCCcEEEEEc---CCCChHHHHHhhhh-----cceEE
Q 025927 137 AG--ADIVSVHCEQSS------------TIHLHRTLNQIKD--LGAKAGVVLN---PATSLSAIECVLDV-----VDLVL 192 (246)
Q Consensus 137 ag--ad~It~H~E~~~------------~~~~~~~i~~Ik~--~G~k~GlAln---P~Tpve~l~~~l~~-----vD~VL 192 (246)
+| ++++.+-+|+.+ .++..+.++.+++ .|+.++.-+- |+...++++..++. +|.+-
T Consensus 110 ~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~~~l~~l~~~~v~ 189 (304)
T 2qgq_A 110 LDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLG 189 (304)
T ss_dssp CTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEE
T ss_pred CCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 89 899999888641 1235577788888 6776654443 56666666655542 56666
Q ss_pred EEeecC
Q 025927 193 IMSVNP 198 (246)
Q Consensus 193 vMsV~P 198 (246)
+....|
T Consensus 190 ~~~~~p 195 (304)
T 2qgq_A 190 AFVYSD 195 (304)
T ss_dssp EEECCC
T ss_pred EEEeeC
Confidence 655443
No 93
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.10 E-value=0.29 Score=46.78 Aligned_cols=166 Identities=16% Similarity=0.126 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC------CCCeeEEEecc---CcccchHHHHhcCCCE
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT------DLPLDVHLMIV---EPEQRVPDFIKAGADI 141 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t------~~plDvHLMV~---~P~~~i~~~~~agad~ 141 (246)
.+.+-++.+.+.++..+.+==-||+++--++.. ++++... +. +-.+-+=.++- +....++.+.++|+|.
T Consensus 167 ~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~-Dil~~~~-~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~d~ 244 (490)
T 4avf_A 167 PLEEMKAKLYENRIEKMLVVDENFYLRGLVTFR-DIEKAKT-YPLASKDEQGRLRVGAAVGTGADTGERVAALVAAGVDV 244 (490)
T ss_dssp ------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSE
T ss_pred cHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehH-Hhhhhcc-CcchhhhccCcceeeeeeccccchHHHHHHHhhcccce
Confidence 455666777777777777522346665444432 2233221 11 11223333333 3356778889999999
Q ss_pred EEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCC--CC---cccHHHHHHH
Q 025927 142 VSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFG--GQ---SFIESQVKKI 213 (246)
Q Consensus 142 It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfg--GQ---~F~~~~l~KI 213 (246)
|.++.-.-......+.++++|+. ++.+.+. | -+..+..+.+.+. +|.|.+ ..-||-- +. .+-...+.-+
T Consensus 245 I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g-~-v~t~e~a~~l~~aGaD~I~v-g~g~Gs~~~t~~~~g~g~p~~~~l 321 (490)
T 4avf_A 245 VVVDTAHGHSKGVIERVRWVKQTFPDVQVIGG-N-IATAEAAKALAEAGADAVKV-GIGPGSICTTRIVAGVGVPQISAI 321 (490)
T ss_dssp EEEECSCCSBHHHHHHHHHHHHHCTTSEEEEE-E-ECSHHHHHHHHHTTCSEEEE-CSSCSTTCHHHHHTCBCCCHHHHH
T ss_pred EEecccCCcchhHHHHHHHHHHHCCCceEEEe-e-eCcHHHHHHHHHcCCCEEEE-CCCCCcCCCccccCCCCccHHHHH
Confidence 99986532123456788888876 4444331 2 2455666666654 999987 4444421 00 0112244555
Q ss_pred HHHHHHHHhcCCCCeEEEeCCC-Chhhhhhc
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGV-GPKNAYKV 243 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l 243 (246)
.++++...+. +..+..|||| +.+.+.++
T Consensus 322 ~~v~~~~~~~--~iPVIa~GGI~~~~di~ka 350 (490)
T 4avf_A 322 ANVAAALEGT--GVPLIADGGIRFSGDLAKA 350 (490)
T ss_dssp HHHHHHHTTT--TCCEEEESCCCSHHHHHHH
T ss_pred HHHHHHhccC--CCcEEEeCCCCCHHHHHHH
Confidence 6666655433 4678899999 67776654
No 94
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.95 E-value=0.39 Score=45.71 Aligned_cols=107 Identities=18% Similarity=0.188 Sum_probs=67.7
Q ss_pred ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCC---
Q 025927 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFG--- 201 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfg--- 201 (246)
...++.+.++|+|.|.+|.-.-......++++++|+. ++.+.+. +- +..+..+.+.+. +|.|.+ +..||.-
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~-~v-~t~~~a~~l~~aGad~I~v-g~~~G~~~~t 333 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGG-NV-VTAAQAKNLIDAGVDGLRV-GMGCGSICIT 333 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEE-EE-CSHHHHHHHHHHTCSEEEE-CSSCSCCBTT
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEec-cc-chHHHHHHHHHcCCCEEEE-CCCCCccccc
Confidence 4566788899999999986531112345789999988 7776541 11 556777776654 999998 7777631
Q ss_pred ------CCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhc
Q 025927 202 ------GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (246)
Q Consensus 202 ------GQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l 243 (246)
|.+ .+..+. .+++..+.. +..+..||||+ .+.+.++
T Consensus 334 ~~~~~~g~~-~~~~~~---~~~~~~~~~--~ipVia~GGI~~~~di~ka 376 (514)
T 1jcn_A 334 QEVMACGRP-QGTAVY---KVAEYARRF--GVPIIADGGIQTVGHVVKA 376 (514)
T ss_dssp BCCCSCCCC-HHHHHH---HHHHHHGGG--TCCEEEESCCCSHHHHHHH
T ss_pred ccccCCCcc-chhHHH---HHHHHHhhC--CCCEEEECCCCCHHHHHHH
Confidence 111 233343 444444433 45688999996 4666554
No 95
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=93.88 E-value=0.21 Score=43.69 Aligned_cols=152 Identities=17% Similarity=0.148 Sum_probs=89.8
Q ss_pred HHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcc---cCCCCCeeEEEeccCcc--c-------------chHHHHhcCC
Q 025927 78 AVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR---PVTDLPLDVHLMIVEPE--Q-------------RVPDFIKAGA 139 (246)
Q Consensus 78 ~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir---~~t~~plDvHLMV~~P~--~-------------~i~~~~~aga 139 (246)
..++.|+|.|-+= ++-.+--+|=+..+++.++ +..+ +-||.|+. |. . -|+.+.++|+
T Consensus 16 ~A~~~GAdRIELc--~~L~~GGlTPS~g~i~~~~~~~~~~~--ipV~vMIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~Ga 90 (224)
T 2bdq_A 16 RLDKAIISRVELC--DNLAVGGTTPSYGVIKEANQYLHEKG--ISVAVMIR-PRGGNFVYNDLELRIMEEDILRAVELES 90 (224)
T ss_dssp GCCTTTCCEEEEE--BCGGGTCBCCCHHHHHHHHHHHHHTT--CEEEEECC-SSSSCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCCEEEEc--CCcccCCcCCCHHHHHHHHHhhhhcC--CceEEEEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCC
Confidence 3456788887653 2222323444566788777 6555 55888985 52 1 2567888999
Q ss_pred CEEEEccCCc-ccccHHHHHHHHHHcCCcEEEEEcC-------CCChHHHHHhhhh-cceEEEEeecCCCCCCcc--cHH
Q 025927 140 DIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNP-------ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSF--IES 208 (246)
Q Consensus 140 d~It~H~E~~-~~~~~~~~i~~Ik~~G~k~GlAlnP-------~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F--~~~ 208 (246)
|-+-|=+=+. ...|..++-+.+...+ ...+.+.- ..|.+.++.+++. +|.|| |- ||++= ..+
T Consensus 91 dGvV~G~Lt~dg~iD~~~~~~Li~~a~-~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rIL--TS----G~~~~~~a~~ 163 (224)
T 2bdq_A 91 DALVLGILTSNNHIDTEAIEQLLPATQ-GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRIL--LH----GSSNGEPIIE 163 (224)
T ss_dssp SEEEECCBCTTSSBCHHHHHHHHHHHT-TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEE--EC----SCSSCCCGGG
T ss_pred CEEEEeeECCCCCcCHHHHHHHHHHhC-CCeEEEECchhccCCcCHHHHHHHHHHcCCCEEE--CC----CCCCCCcHHH
Confidence 9988854210 1234443333333322 22344432 2345666666654 88887 32 33333 456
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhcc
Q 025927 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 209 ~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~ 244 (246)
-++.|+++.+. .+-.+.|.+=||||.+|++++.
T Consensus 164 g~~~L~~Lv~~---a~~ri~Im~GgGV~~~Ni~~l~ 196 (224)
T 2bdq_A 164 NIKHIKALVEY---ANNRIEIMVGGGVTAENYQYIC 196 (224)
T ss_dssp GHHHHHHHHHH---HTTSSEEEECSSCCTTTHHHHH
T ss_pred HHHHHHHHHHh---hCCCeEEEeCCCCCHHHHHHHH
Confidence 66666666554 3335789999999999999875
No 96
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=93.81 E-value=1.3 Score=42.27 Aligned_cols=166 Identities=11% Similarity=0.087 Sum_probs=106.6
Q ss_pred Eeee--ecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 60 VSPS--ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 60 IsPS--Il~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
-||| ++..| ....+..+..+++ +..|=+ ..|.+|. .=+++.++++|+.+++|+-.-=.+.+|.+ +.+...+
T Consensus 57 aSPSkG~i~~~-~~~~~iA~~y~~~-A~~Isv-LTd~~~F---~gs~~dL~~vr~~v~lPvLrKDFI~d~~Q-i~ea~~~ 129 (452)
T 1pii_A 57 ASPSKGVIRDD-FDPARIAAIYKHY-ASAISV-LTDEKYF---QGSFNFLPIVSQIAPQPILCKDFIIDPYQ-IYLARYY 129 (452)
T ss_dssp EETTTEESCSS-CCHHHHHHHHTTT-CSEEEE-ECCSTTT---CCCTTHHHHHHHHCCSCEEEESCCCSHHH-HHHHHHT
T ss_pred CCCCCCccCCC-CCHHHHHHHHHhh-CcEEEE-Eeccccc---CCCHHHHHHHHHhcCCCeEEEeccCCHHH-HHHHHHc
Confidence 4777 34443 3556666777766 777766 4666663 34677899999988888744334455654 5567889
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeec-CCCCCCcccHHHHHHHHH
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVN-PGFGGQSFIESQVKKISD 215 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~-PGfgGQ~F~~~~l~KI~~ 215 (246)
|||.|.+-.-......+.++++.+++.|+.+=+=++ ..++++..+. ..|+| .|| .+..+ |..+ ++...+
T Consensus 130 GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh---~~eE~~~A~~lga~iI---Ginnr~L~t--~~~d-l~~~~~ 200 (452)
T 1pii_A 130 QADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVS---NEEEQERAIALGAKVV---GINNRDLRD--LSID-LNRTRE 200 (452)
T ss_dssp TCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHHHTTCSEE---EEESEETTT--TEEC-THHHHH
T ss_pred CCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHHCCCCEE---EEeCCCCCC--CCCC-HHHHHH
Confidence 999988877654345688999999999988766665 4455554433 35643 344 35533 3333 555556
Q ss_pred HHHHHHhcCCCCeEEEeCCCC-hhhhhhcc
Q 025927 216 LRRMCLEKGVNPWIEVDGGVG-PKNAYKVP 244 (246)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~ 244 (246)
|.+.+++ +..+-.-|||+ .+.++.+.
T Consensus 201 L~~~ip~---~~~vIaEsGI~t~edv~~~~ 227 (452)
T 1pii_A 201 LAPKLGH---NVTVISESGINTYAQVRELS 227 (452)
T ss_dssp HHHHHCT---TSEEEEESCCCCHHHHHHHT
T ss_pred HHHhCCC---CCeEEEECCCCCHHHHHHHH
Confidence 6666643 35577799997 55555554
No 97
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.80 E-value=0.34 Score=44.76 Aligned_cols=119 Identities=21% Similarity=0.338 Sum_probs=71.2
Q ss_pred eeEEEeccC-cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEE
Q 025927 118 LDVHLMIVE-PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 118 lDvHLMV~~-P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLv 193 (246)
+-+-++... -...++.+.++|+|.|.+|.-........+.++++|+. ++.+.+ .-.+..+..+.+.+. +|.|.+
T Consensus 144 ~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv--~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 144 VGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIA--GNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp CEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEE--EEECSHHHHHHHHTTTCSEEEE
T ss_pred EEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEE--cCCCcHHHHHHHHhcCCCEEEE
Confidence 455555421 12445667789999999864321122356778888887 777765 112446777766554 999999
Q ss_pred EeecCCC-------CCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhc
Q 025927 194 MSVNPGF-------GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (246)
Q Consensus 194 MsV~PGf-------gGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l 243 (246)
+..||- +|.. .| .++-+.++++..++ .++.|..||||+ .+.+.++
T Consensus 222 -g~~~G~~~~~~~~~~~g-~p-~~~~l~~v~~~~~~--~~ipVia~GGI~~~~d~~~a 274 (404)
T 1eep_A 222 -GIGPGSICTTRIVAGVG-VP-QITAICDVYEACNN--TNICIIADGGIRFSGDVVKA 274 (404)
T ss_dssp -CSSCSTTSHHHHHHCCC-CC-HHHHHHHHHHHHTT--SSCEEEEESCCCSHHHHHHH
T ss_pred -CCCCCcCcCccccCCCC-cc-hHHHHHHHHHHHhh--cCceEEEECCCCCHHHHHHH
Confidence 876653 1110 11 23444555555433 356789999997 5666554
No 98
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=93.76 E-value=0.52 Score=44.99 Aligned_cols=146 Identities=17% Similarity=0.121 Sum_probs=96.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCC--CCCHHHHhhcccCCCCCeeEEEeccCcccchHHH-HhcCCCEEEEccCCcc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNI--TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDF-IKAGADIVSVHCEQSS 150 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~--tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~-~~agad~It~H~E~~~ 150 (246)
++++...++|+|++=+= |+|.- ...++..++|.+.. ...-|=+.|..+...+... .+.+.|.|-+|=+.
T Consensus 266 eda~~a~~~Gad~iGfI-----f~~~SpR~V~~~~a~~i~~~~-~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG~E-- 337 (452)
T 1pii_A 266 QDAKAAYDAGAIYGGLI-----FVATSPRCVNVEQAQEVMAAA-PLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNE-- 337 (452)
T ss_dssp HHHHHHHHHTCSEEEEE-----CCTTCTTBCCHHHHHHHHHHC-CCEEEEEESSCCHHHHHHHHHHHTCSEEEECSCC--
T ss_pred HHHHHHHhcCCCEEEee-----cCCCCCCCCCHHHHHHHHhcC-CCCEEEEEeCCCHHHHHHHHHhcCCCEEEECCCC--
Confidence 45566668899999876 44431 34678888775543 3345667887776666665 45799999999752
Q ss_pred cccHHHHHHHHHHc---CCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 151 TIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 151 ~~~~~~~i~~Ik~~---G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
.+ ..++.+|+. ++++==|+.....++. ..|- .+|++|+=+ ..|..|+.|+-+.+.. . . ..
T Consensus 338 --~~-~~~~~l~~~~p~~~~iika~~v~~~~~~-~~~~-~~d~~LlD~-~~GGtG~~fdW~~l~~------~---~--~~ 400 (452)
T 1pii_A 338 --EQ-LYIDTLREALPAHVAIWKALSVGETLPA-REFQ-HVDKYVLDN-GQGGSGQRFDWSLLNG------Q---S--LG 400 (452)
T ss_dssp --CH-HHHHHHHHHSCTTSEEEEEEECSSSCCC-CCCT-TCCEEEEES-CSCCSSCCCCGGGGTT------S---C--CT
T ss_pred --CH-HHHHHHHhhccCCCcEEEEEecCCccch-hhhh-cccEEEecC-CCCCCCCccCHHHhhc------c---c--CC
Confidence 22 345556653 6677666766655432 2232 489999887 5688999998876531 1 1 23
Q ss_pred eEEEeCCCChhhhhhcc
Q 025927 228 WIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 228 ~I~VDGGI~~e~i~~l~ 244 (246)
.+.+=||+|++|+.+.+
T Consensus 401 p~iLAGGL~p~NV~~ai 417 (452)
T 1pii_A 401 NVLLAGGLGADNCVEAA 417 (452)
T ss_dssp TEEEESSCCTTTHHHHH
T ss_pred cEEEEcCCCHHHHHHHH
Confidence 47789999999997653
No 99
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=93.70 E-value=0.53 Score=43.42 Aligned_cols=178 Identities=14% Similarity=0.252 Sum_probs=111.8
Q ss_pred CCcEEeeeecccChhhHHHHHHHHHHcCCCEEEe-----eeccCc-----------ccCCCCC---CHH-HHhhc---cc
Q 025927 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV-----DVMDGR-----------FVPNITI---GPL-VVDAL---RP 112 (246)
Q Consensus 56 ~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHi-----DIMDG~-----------FVpN~tf---gp~-~I~~i---r~ 112 (246)
+.+.++.+.++-+ .+.++.+...|.-.+=+ .=-.|+ +.+.++| |.+ +++.+ ++
T Consensus 48 NPv~lAAG~~~~~----~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~ 123 (354)
T 4ef8_A 48 NPFMNAAGVMCTT----TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHD 123 (354)
T ss_dssp SSEEECTTSSCSS----HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHTCC
T ss_pred CCCEeccCCCCCC----HHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHHhh
Confidence 3566666666544 35566666666544311 111222 2334444 333 33444 33
Q ss_pred CCCCCeeEEEeccCcccchHHH---H---hcCCCEEEEccCC--------c--ccccHHHHHHHHHHc-CCcEEEEEcCC
Q 025927 113 VTDLPLDVHLMIVEPEQRVPDF---I---KAGADIVSVHCEQ--------S--STIHLHRTLNQIKDL-GAKAGVVLNPA 175 (246)
Q Consensus 113 ~t~~plDvHLMV~~P~~~i~~~---~---~agad~It~H~E~--------~--~~~~~~~~i~~Ik~~-G~k~GlAlnP~ 175 (246)
..+.|+-+-|+-.+|+.|++.. . +.|+|+|.+.+=+ . ..+.+.++++.+|+. .+.+.+=|.|+
T Consensus 124 ~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~ 203 (354)
T 4ef8_A 124 YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPY 203 (354)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCC
T ss_pred cCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCC
Confidence 4578999999999999987644 2 4579999988641 1 013356788888865 67889999999
Q ss_pred CChHHHHHhhh------hcceEEE-------Eeec---------C-----CCCCCcccHHHHHHHHHHHHHHHhcCCCCe
Q 025927 176 TSLSAIECVLD------VVDLVLI-------MSVN---------P-----GFGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 176 Tpve~l~~~l~------~vD~VLv-------MsV~---------P-----GfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
...+.+..+++ -+|.|.+ |.++ | |++|.+..|..++-|+++++.. .++.
T Consensus 204 ~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~----~~ip 279 (354)
T 4ef8_A 204 FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC----PGKL 279 (354)
T ss_dssp CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC----TTSE
T ss_pred CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC----CCCC
Confidence 88877777664 3888865 3332 1 3567777788888888877652 2467
Q ss_pred EEEeCCCC-hhhhh
Q 025927 229 IEVDGGVG-PKNAY 241 (246)
Q Consensus 229 I~VDGGI~-~e~i~ 241 (246)
|...|||. .+.+.
T Consensus 280 II~~GGI~s~~da~ 293 (354)
T 4ef8_A 280 IFGCGGVYTGEDAF 293 (354)
T ss_dssp EEEESCCCSHHHHH
T ss_pred EEEECCcCCHHHHH
Confidence 88999996 34443
No 100
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.59 E-value=0.76 Score=40.87 Aligned_cols=162 Identities=16% Similarity=0.121 Sum_probs=97.4
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCccc-----CCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFV-----PNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 141 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~ 141 (246)
.+.....+-++.|++.|+++|=+ |.|+ |.+.-..+.++.+++..+.++-+|+ .+ .+.++..+++|++.
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~----g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~--~~-~~~i~~a~~aG~~~ 99 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEV----GSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA--PN-LKGFEAALESGVKE 99 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE----EECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC--CS-HHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEE----CCCcCccccccccCHHHHHHHhhhcCCCEEEEEe--CC-HHHHHHHHhCCcCE
Confidence 44555667788999999987655 4443 4443223456777766667777776 33 45788889999998
Q ss_pred EEEccCCc--------------ccccHHHHHHHHHHcCCcEEEEEcC--------CCChHHHHHhhhh-----cceEEEE
Q 025927 142 VSVHCEQS--------------STIHLHRTLNQIKDLGAKAGVVLNP--------ATSLSAIECVLDV-----VDLVLIM 194 (246)
Q Consensus 142 It~H~E~~--------------~~~~~~~~i~~Ik~~G~k~GlAlnP--------~Tpve~l~~~l~~-----vD~VLvM 194 (246)
|.+-.-+. ..+...+.++++|+.|+++-..|.- .|+.+.+.+++.. +|.|-+-
T Consensus 100 v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 100 VAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp EEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 77632110 0122467789999999988654432 2788888887752 7876665
Q ss_pred eecCCCCCCcccH-HHHHHHHHHHHHHHhcCCCCeEEE--eCCCChhhhhh
Q 025927 195 SVNPGFGGQSFIE-SQVKKISDLRRMCLEKGVNPWIEV--DGGVGPKNAYK 242 (246)
Q Consensus 195 sV~PGfgGQ~F~~-~~l~KI~~lr~l~~~~~~~~~I~V--DGGI~~e~i~~ 242 (246)
... |. ..| .+.+.++.+++..+ +..+.+-- |-|.-..|+..
T Consensus 180 DT~-G~----~~P~~~~~lv~~l~~~~~--~~~l~~H~Hn~~Gla~An~la 223 (302)
T 2ftp_A 180 DTI-GV----GTAGATRRLIEAVASEVP--RERLAGHFHDTYGQALANIYA 223 (302)
T ss_dssp ESS-SC----CCHHHHHHHHHHHTTTSC--GGGEEEEEBCTTSCHHHHHHH
T ss_pred CCC-CC----cCHHHHHHHHHHHHHhCC--CCeEEEEeCCCccHHHHHHHH
Confidence 332 43 234 34555565555432 11223333 66666655543
No 101
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=93.56 E-value=0.5 Score=41.26 Aligned_cols=145 Identities=15% Similarity=0.173 Sum_probs=87.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc---cCCcc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH---CEQSS 150 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H---~E~~~ 150 (246)
+.++.+.++|+|.|=+=+-+|.-..+ -.++++++|+ +++|+- ||...+..+ ++|+|.+.+. .|.
T Consensus 24 ~~~~~l~~~GaD~IelG~S~g~t~~~---~~~~v~~ir~-~~~Piv--l~~y~~n~i-----~~gvDg~iipdLp~ee-- 90 (234)
T 2f6u_A 24 EIIKAVADSGTDAVMISGTQNVTYEK---ARTLIEKVSQ-YGLPIV--VEPSDPSNV-----VYDVDYLFVPTVLNSA-- 90 (234)
T ss_dssp HHHHHHHTTTCSEEEECCCTTCCHHH---HHHHHHHHTT-SCCCEE--ECCSSCCCC-----CCCSSEEEEEEETTBS--
T ss_pred HHHHHHHHcCCCEEEECCCCCCCHHH---HHHHHHHhcC-CCCCEE--EecCCcchh-----hcCCCEEEEcccCCCC--
Confidence 45789999999999998854422111 3467888888 777765 588875332 7799988775 332
Q ss_pred cccHH-----HHHHH----HHHcC-----CcEEE----EEcCCC------------ChHHHHHhhhhc------ceEEEE
Q 025927 151 TIHLH-----RTLNQ----IKDLG-----AKAGV----VLNPAT------------SLSAIECVLDVV------DLVLIM 194 (246)
Q Consensus 151 ~~~~~-----~~i~~----Ik~~G-----~k~Gl----AlnP~T------------pve~l~~~l~~v------D~VLvM 194 (246)
..++. +.+.. ++++| ...=- .++|++ +.+.+..+...- -+|-+-
T Consensus 91 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vyl~ 170 (234)
T 2f6u_A 91 DGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIYIE 170 (234)
T ss_dssp BGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEEEe
Confidence 12222 33322 27777 54433 788887 556677766543 344444
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhc
Q 025927 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKV 243 (246)
Q Consensus 195 sV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l 243 (246)
+ -| ..-+.+.+ +++++... +..+.|=|||+. +.++++
T Consensus 171 ~--~G---~~~~~~~i---~~i~~~~~----~~Pv~vGgGI~s~e~a~~~ 208 (234)
T 2f6u_A 171 Y--SG---TYGNPELV---AEVKKVLD----KARLFYGGGIDSREKAREM 208 (234)
T ss_dssp C--TT---SCCCHHHH---HHHHHHCS----SSEEEEESCCCSHHHHHHH
T ss_pred C--CC---CcchHHHH---HHHHHhCC----CCCEEEEecCCCHHHHHHH
Confidence 3 23 33344444 44444421 346999999985 666554
No 102
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=93.55 E-value=0.17 Score=44.87 Aligned_cols=84 Identities=12% Similarity=0.097 Sum_probs=53.8
Q ss_pred ccCCcccccHHHHHHHHHHcC---CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHH
Q 025927 145 HCEQSSTIHLHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 145 H~E~~~~~~~~~~i~~Ik~~G---~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
|++. .......++.+|+.. .++++-. +|. +.+..-++ -+|+|.+-+ |.++.++ ++++.+
T Consensus 161 Hi~~--~g~~~~ai~~~r~~~~~~~~i~vev--~tl-ee~~~A~~aGaD~I~ld~---------~~~~~l~---~~v~~l 223 (273)
T 2b7n_A 161 HLRH--VKDLKSFLTHARKNLPFTAKIEIEC--ESF-EEAKNAMNAGADIVMCDN---------LSVLETK---EIAAYR 223 (273)
T ss_dssp HHTT--CSSHHHHHHHHGGGSCTTCCEEEEE--SSH-HHHHHHHHHTCSEEEEET---------CCHHHHH---HHHHHH
T ss_pred HHHH--hCCHHHHHHHHHHhCCCCceEEEEc--CCH-HHHHHHHHcCCCEEEECC---------CCHHHHH---HHHHHh
Confidence 5553 234566778888765 4667644 444 55554443 599999875 3345444 444444
Q ss_pred HhcCCCCeEEEeCCCChhhhhhccc
Q 025927 221 LEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 221 ~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+....+..|++-||||++|++++.+
T Consensus 224 ~~~~~~~~i~AsGGI~~~ni~~~~~ 248 (273)
T 2b7n_A 224 DAHYPFVLLEASGNISLESINAYAK 248 (273)
T ss_dssp HHHCTTCEEEEESSCCTTTHHHHHT
T ss_pred hccCCCcEEEEECCCCHHHHHHHHH
Confidence 4433457899999999999998865
No 103
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=93.40 E-value=1.2 Score=38.50 Aligned_cols=168 Identities=18% Similarity=0.175 Sum_probs=104.0
Q ss_pred eecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEE
Q 025927 63 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (246)
Q Consensus 63 SIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~I 142 (246)
-.+..|+.++ .+.+.+.|+|++|+==.||.+- +-.-..+.++.+.+.+.+|+.+===+.+. .-++.+.++||+.|
T Consensus 27 ~~~~~dP~~~---a~~~~~~gad~lhvvDld~a~~-~~~~~~~~i~~i~~~~~~pl~vGGGIrs~-e~~~~~l~~GadkV 101 (243)
T 4gj1_A 27 KVYKYNPLKK---FKEYEKAGAKELHLVDLTGAKD-PSKRQFALIEKLAKEVSVNLQVGGGIRSK-EEVKALLDCGVKRV 101 (243)
T ss_dssp EECCCCHHHH---HHHHHHHTCCEEEEEEHHHHHC-GGGCCHHHHHHHHHHCCSEEEEESSCCCH-HHHHHHHHTTCSEE
T ss_pred cEeCCCHHHH---HHHHHHCCCCEEEEEecCcccc-cchhHHHHHHHHHHhcCCCeEeccccccH-HHHHHHHHcCCCEE
Confidence 3456677766 4567888999999854566542 22334578888877777776655445453 34778889999999
Q ss_pred EEccCCcccccHHHHHHHHHHcCCc-EEEEEcC---------------CC---ChHHHHHhhh-hcceEEEEeecCCCCC
Q 025927 143 SVHCEQSSTIHLHRTLNQIKDLGAK-AGVVLNP---------------AT---SLSAIECVLD-VVDLVLIMSVNPGFGG 202 (246)
Q Consensus 143 t~H~E~~~~~~~~~~i~~Ik~~G~k-~GlAlnP---------------~T---pve~l~~~l~-~vD~VLvMsV~PGfgG 202 (246)
.+=-.+ ..++.-+-+..++.|-+ +-++|.- .| +.+.++.+.+ -+.-+++.+++---..
T Consensus 102 ii~t~a--~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~ 179 (243)
T 4gj1_A 102 VIGSMA--IKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTM 179 (243)
T ss_dssp EECTTT--TTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC----
T ss_pred EEcccc--ccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccc
Confidence 998775 45666555666777744 2222221 12 2344444433 3778999999987778
Q ss_pred CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhcc
Q 025927 203 QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVP 244 (246)
Q Consensus 203 Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l~ 244 (246)
+-++-+.++++++. .. +..+.+=||++ .+.+..+.
T Consensus 180 ~G~d~~l~~~l~~~---~~----~ipviasGGv~~~~Dl~~l~ 215 (243)
T 4gj1_A 180 QGVNVRLYKLIHEI---FP----NICIQASGGVASLKDLENLK 215 (243)
T ss_dssp -CCCHHHHHHHHHH---CT----TSEEEEESCCCSHHHHHHTT
T ss_pred cCCCHHHHHHHHHh---cC----CCCEEEEcCCCCHHHHHHHH
Confidence 88888888776542 11 23567789985 45555543
No 104
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.39 E-value=0.65 Score=41.55 Aligned_cols=134 Identities=17% Similarity=0.119 Sum_probs=82.0
Q ss_pred HHhhcccC-CCCCeeEEEeccC-------cccchHHHH--hcCCCEEEEccCCcc---------cccHHHHHHHHHHc--
Q 025927 106 VVDALRPV-TDLPLDVHLMIVE-------PEQRVPDFI--KAGADIVSVHCEQSS---------TIHLHRTLNQIKDL-- 164 (246)
Q Consensus 106 ~I~~ir~~-t~~plDvHLMV~~-------P~~~i~~~~--~agad~It~H~E~~~---------~~~~~~~i~~Ik~~-- 164 (246)
+++.+++. .+.|+-+.++-.+ ++.|.+... +.|+|.|.+|.-+-. ...+.++++.+|+.
T Consensus 123 ~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~ 202 (336)
T 1f76_A 123 LVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQN 202 (336)
T ss_dssp HHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 44445442 2457888887665 566665543 247999999973210 11245778888865
Q ss_pred --------CCcEEEEEcCCCChHHHHHhh---h--hcceEEEEeecC---------------CCCCCcccHHHHHHHHHH
Q 025927 165 --------GAKAGVVLNPATSLSAIECVL---D--VVDLVLIMSVNP---------------GFGGQSFIESQVKKISDL 216 (246)
Q Consensus 165 --------G~k~GlAlnP~Tpve~l~~~l---~--~vD~VLvMsV~P---------------GfgGQ~F~~~~l~KI~~l 216 (246)
++.+.+=++|+.+.+++.++. . -+|.|.+-.--. |+.|.+..+..++-++++
T Consensus 203 ~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i 282 (336)
T 1f76_A 203 DLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRL 282 (336)
T ss_dssp HHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHH
T ss_pred hhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHH
Confidence 688898899887655543332 2 289988743211 234554556677777777
Q ss_pred HHHHHhcCCCCeEEEeCCCC-hhhhhh
Q 025927 217 RRMCLEKGVNPWIEVDGGVG-PKNAYK 242 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~-~e~i~~ 242 (246)
++..+. ++.|-..|||+ .+.+.+
T Consensus 283 ~~~~~~---~ipVi~~GGI~~~~da~~ 306 (336)
T 1f76_A 283 SLELNG---RLPIIGVGGIDSVIAARE 306 (336)
T ss_dssp HHHHTT---SSCEEEESSCCSHHHHHH
T ss_pred HHHhCC---CCCEEEECCCCCHHHHHH
Confidence 776532 35688899996 444443
No 105
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=93.37 E-value=0.36 Score=46.09 Aligned_cols=110 Identities=20% Similarity=0.291 Sum_probs=67.0
Q ss_pred cCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc--C-CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCC
Q 025927 125 VEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--G-AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGF 200 (246)
Q Consensus 125 ~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~--G-~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGf 200 (246)
.+....++.+.++|++.+.+|...-........++++|+. + ..++ ..--...+..+.+++ -+|.|.+ ++.||.
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi--~G~V~t~~~a~~l~~aGad~I~V-g~~~g~ 317 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVG--AGNIVDGEGFRYLADAGADFIKI-GIGGGS 317 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEE--EEEECSHHHHHHHHHHTCSEEEE-CSSCST
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEe--eccccCHHHHHHHHHhCCCeEEe-cccCCc
Confidence 3444557788889999999987531122345667888877 4 5544 233345566666654 4999988 999974
Q ss_pred C---------CCcccHHHHHHHHHH-HHHHHhcCCCCeEEEeCCCChh
Q 025927 201 G---------GQSFIESQVKKISDL-RRMCLEKGVNPWIEVDGGVGPK 238 (246)
Q Consensus 201 g---------GQ~F~~~~l~KI~~l-r~l~~~~~~~~~I~VDGGI~~e 238 (246)
. |.+- ..++..+.+. +++.++.|.+..+..||||...
T Consensus 318 ~~~~r~~~~~g~p~-~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~ 364 (503)
T 1me8_A 318 ICITREQKGIGRGQ-ATAVIDVVAERNKYFEETGIYIPVCSDGGIVYD 364 (503)
T ss_dssp TCCSTTTTCCCCCH-HHHHHHHHHHHHHHHHHHSEECCEEEESCCCSH
T ss_pred CcccccccCCCCch-HHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCH
Confidence 2 2221 1233333332 4444555545678899999743
No 106
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.27 E-value=0.33 Score=45.85 Aligned_cols=168 Identities=18% Similarity=0.221 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEec-------cCcccchHHHHhcCCCE
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMI-------VEPEQRVPDFIKAGADI 141 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV-------~~P~~~i~~~~~agad~ 141 (246)
..+.+-++.+.+.++.++.+==-||+++-=++.. ++++.+..-. .....-.+++ .+-...++.+.++|+|.
T Consensus 174 ~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~-Dll~~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~aGvd~ 252 (494)
T 1vrd_A 174 ISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIK-DIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDV 252 (494)
T ss_dssp ------------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHH-HHHhhhccccccccchhhhccccccCcCHhHHHHHHHHHHhCCCE
Confidence 3455666777788887777522356665444442 3444443210 0001112222 11135677889999999
Q ss_pred EEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCCCCc-----ccHHHHHHH
Q 025927 142 VSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQS-----FIESQVKKI 213 (246)
Q Consensus 142 It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~-----F~~~~l~KI 213 (246)
|.+|.-.-......+.++++|+. ++.+.+ .-.+..+..+.+.+. +|.|.+ +..+|...-. +-.....-+
T Consensus 253 v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~--g~~~t~e~a~~l~~~G~d~I~v-~~~~G~~~~~~~~~~~g~p~~~~l 329 (494)
T 1vrd_A 253 IVIDTAHGHSRRVIETLEMIKADYPDLPVVA--GNVATPEGTEALIKAGADAVKV-GVGPGSICTTRVVAGVGVPQLTAV 329 (494)
T ss_dssp EEECCSCCSSHHHHHHHHHHHHHCTTSCEEE--EEECSHHHHHHHHHTTCSEEEE-CSSCSTTCHHHHHHCCCCCHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHHHCCCceEEe--CCcCCHHHHHHHHHcCCCEEEE-cCCCCccccccccCCCCccHHHHH
Confidence 99986531123466788899987 666644 234566777666543 999988 7766521100 001123334
Q ss_pred HHHHHHHHhcCCCCeEEEeCCC-Chhhhhhc
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGV-GPKNAYKV 243 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~l 243 (246)
.++++.+.+ .+..+..|||| +.+.+.++
T Consensus 330 ~~v~~~~~~--~~ipvia~GGI~~~~di~ka 358 (494)
T 1vrd_A 330 MECSEVARK--YDVPIIADGGIRYSGDIVKA 358 (494)
T ss_dssp HHHHHHHHT--TTCCEEEESCCCSHHHHHHH
T ss_pred HHHHHHHhh--cCCCEEEECCcCCHHHHHHH
Confidence 445554433 35678999999 45555443
No 107
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=93.26 E-value=0.69 Score=40.51 Aligned_cols=146 Identities=17% Similarity=0.158 Sum_probs=85.7
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc---cCCcc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH---CEQSS 150 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H---~E~~~ 150 (246)
+.++.+.++|+|.+=+=+-+|.-..+ ..+.++++|+ +++|+.. |...+... .+|+|.+.+. .|.
T Consensus 24 ~~~~~l~~~GaD~ielG~S~Gvt~~~---~~~~v~~ir~-~~~Pivl--m~y~~n~i-----~~G~dg~iiPdLp~ee-- 90 (240)
T 1viz_A 24 EQLEILCESGTDAVIIGGSDGVTEDN---VLRMMSKVRR-FLVPCVL--EVSAIEAI-----VPGFDLYFIPSVLNSK-- 90 (240)
T ss_dssp HHHHHHHTSCCSEEEECC----CHHH---HHHHHHHHTT-SSSCEEE--ECSCGGGC-----CSCCSEEEEEEETTBS--
T ss_pred HHHHHHHHcCCCEEEECCCCCCCHHH---HHHHHHHhhC-cCCCEEE--ecCccccc-----cCCCCEEEEcccCccc--
Confidence 45889999999999888855433221 4678899998 7888764 77764322 7799977765 231
Q ss_pred cccH--HHHHHHHHHcC-----CcEEE----EEcCCCC------------hHHHHHhhhhc-----ceEEEEeecCCCCC
Q 025927 151 TIHL--HRTLNQIKDLG-----AKAGV----VLNPATS------------LSAIECVLDVV-----DLVLIMSVNPGFGG 202 (246)
Q Consensus 151 ~~~~--~~~i~~Ik~~G-----~k~Gl----AlnP~Tp------------ve~l~~~l~~v-----D~VLvMsV~PGfgG 202 (246)
...+ -.-...++++| ...=- .++|++. .+.+..+...- -+|-+-+ -|
T Consensus 91 ~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s--~G--- 165 (240)
T 1viz_A 91 NADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY--SG--- 165 (240)
T ss_dssp SGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC--TT---
T ss_pred ChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeC--CC---
Confidence 1121 11245678888 65543 6788766 34455554333 3554443 23
Q ss_pred CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhcc
Q 025927 203 QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVP 244 (246)
Q Consensus 203 Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~ 244 (246)
..-+.+.+++| ++... +..++|=|||+. +.++++.
T Consensus 166 ~~~~~~~i~~i---~~~~~----~~Pv~vGgGI~t~e~a~~~~ 201 (240)
T 1viz_A 166 VLGDIEAVKKT---KAVLE----TSTLFYGGGIKDAETAKQYA 201 (240)
T ss_dssp SCCCHHHHHHH---HHTCS----SSEEEEESSCCSHHHHHHHH
T ss_pred ccChHHHHHHH---HHhcC----CCCEEEEeccCCHHHHHHHH
Confidence 33344444444 43321 346999999975 6666543
No 108
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=93.22 E-value=0.85 Score=50.95 Aligned_cols=123 Identities=18% Similarity=0.293 Sum_probs=83.3
Q ss_pred HHHhhcccCC--CCCeeEEEeccCcc------cchHHHHhcCCCE--EEEccCCcccccHHHHHHHHHHcCCcEEEEEcC
Q 025927 105 LVVDALRPVT--DLPLDVHLMIVEPE------QRVPDFIKAGADI--VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNP 174 (246)
Q Consensus 105 ~~I~~ir~~t--~~plDvHLMV~~P~------~~i~~~~~agad~--It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP 174 (246)
+.|+.+|+.+ +.|+-+-+|+-+|. ..++.+.+.|++. |+++.- ....+.+++.++++|++.- .+.+
T Consensus 625 ~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G---~p~~e~~~~~l~~~gi~~i-~~v~ 700 (2060)
T 2uva_G 625 DAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAG---VPSIEVANEYIQTLGIRHI-SFKP 700 (2060)
T ss_dssp HHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESS---CCCHHHHHHHHHHSCCSEE-EECC
T ss_pred HHHHHHHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCC---CCCHHHHHHHHHHcCCeEE-EecC
Confidence 3566677777 68999999999988 5678888899999 999865 2345568889999998875 4444
Q ss_pred CCChHHHHH---hh-hhcceEEEEeecCC-CCCC----cccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 175 ATSLSAIEC---VL-DVVDLVLIMSVNPG-FGGQ----SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 175 ~Tpve~l~~---~l-~~vD~VLvMsV~PG-fgGQ----~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
+. .+..+- +. .-+|.|.+|-++-+ -||. .+...++.-+.++++.. +.-+.++|||..
T Consensus 701 ~~-~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~-----~ipviaaGGI~~ 766 (2060)
T 2uva_G 701 GS-VDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS-----NIVLVAGSGFGG 766 (2060)
T ss_dssp CS-HHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST-----TEEEEEESSCCS
T ss_pred CH-HHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc-----CCCEEEeCCCCC
Confidence 43 444433 12 24899997777742 2222 12245555555554432 467889999964
No 109
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=93.18 E-value=0.75 Score=38.53 Aligned_cols=133 Identities=9% Similarity=-0.062 Sum_probs=73.6
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCe-eEEEe--ccCc------
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL-DVHLM--IVEP------ 127 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~pl-DvHLM--V~~P------ 127 (246)
.++|+.+.++..-..+.+.++.+.+.|.+.+-+-.-..++-+.-.-..+.++++-+-.++.+ .+|.- ...|
T Consensus 6 ~m~lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~ 85 (272)
T 2q02_A 6 KTRFCINRKIAPGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVK 85 (272)
T ss_dssp GGGEEEEGGGCTTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHH
T ss_pred ehhhhhcccccCCCCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHH
Confidence 35677777765555788999999999999887754111111101223444444433456765 66752 2222
Q ss_pred --ccchHHHHhcCCCEEEEccCCcc--------cccHHHHHHHHHHcCCcEEEEEc--CCC---ChHHHHHhhhhcc
Q 025927 128 --EQRVPDFIKAGADIVSVHCEQSS--------TIHLHRTLNQIKDLGAKAGVVLN--PAT---SLSAIECVLDVVD 189 (246)
Q Consensus 128 --~~~i~~~~~agad~It~H~E~~~--------~~~~~~~i~~Ik~~G~k~GlAln--P~T---pve~l~~~l~~vD 189 (246)
.+.++...+.|++.|.+|.-... .+.+.++....++.|++.++=-. +.+ ..+.+..+++.+|
T Consensus 86 ~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 86 KTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAG 162 (272)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhC
Confidence 23444445679999999864210 12234555556777877555322 112 3455556666553
No 110
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=93.01 E-value=0.71 Score=41.10 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=88.3
Q ss_pred cCCCCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEe--eeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEecc---
Q 025927 52 KFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV--DVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIV--- 125 (246)
Q Consensus 52 ~~~~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHi--DIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~--- 125 (246)
.+-.++.+|+.||..-+...+.++++.+...|+|.+=+ |..+. ..+...=.+.++.||+.+ ++|+-+++-..
T Consensus 34 ~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eG 111 (276)
T 3o1n_A 34 VVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFAN--VTTAESVLEAAGAIREIITDKPLLFTFRSAKEG 111 (276)
T ss_dssp EETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT--TTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGT
T ss_pred EeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccc--cCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhC
Confidence 46667889999999999999999999998889998776 54442 111111124566677765 78998888753
Q ss_pred -----CcccchHHH---HhcC-CCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEc--CCCCh-HHHHHhhh
Q 025927 126 -----EPEQRVPDF---IKAG-ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN--PATSL-SAIECVLD 186 (246)
Q Consensus 126 -----~P~~~i~~~---~~ag-ad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAln--P~Tpv-e~l~~~l~ 186 (246)
..+.|++.+ ++.| +|+|-+-+.. ..+...++++.+++.|.|+=+... ..||- +.+...+.
T Consensus 112 G~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~-~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~ 183 (276)
T 3o1n_A 112 GEQALTTGQYIDLNRAAVDSGLVDMIDLELFT-GDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLR 183 (276)
T ss_dssp CSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG-CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC-CHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHH
Confidence 234555555 4568 9999987653 123355677777888988866544 23553 45555544
No 111
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=92.95 E-value=0.4 Score=41.80 Aligned_cols=147 Identities=14% Similarity=0.140 Sum_probs=91.7
Q ss_pred HHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcc-cC--CCCCeeEEEeccCcccchHHHHhcCCCEEEEc-cCC
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR-PV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH-CEQ 148 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir-~~--t~~plDvHLMV~~P~~~i~~~~~agad~It~H-~E~ 148 (246)
.+.++.+...|+|++=+|.-|+ | ...+..+... .. .+.+.-|=+--.+| .++....++|++.|.+. +|+
T Consensus 30 p~~~e~a~~~gaD~v~lDlEd~---p---~~~~~a~~~~~~~~~~~~~~~VRv~~~~~-~~i~~~l~~g~~gI~~P~V~s 102 (256)
T 1dxe_A 30 PISTEVLGLAGFDWLVLDGEHA---P---NDISTFIPQLMALKGSASAPVVRVPTNEP-VIIKRLLDIGFYNFLIPFVET 102 (256)
T ss_dssp HHHHHHHTTSCCSEEEEESSSS---S---CCHHHHHHHHHHTTTCSSEEEEECSSSCH-HHHHHHHHTTCCEEEESCCCS
T ss_pred HHHHHHHHhCCCCEEEEcCCCC---C---CCHHHHHHHHHHHHhCCCcEEEECCCCCH-HHHHHHHhcCCceeeecCcCC
Confidence 3556777889999999999998 3 2233332221 11 23332222222233 35888889999987776 442
Q ss_pred cccccHHHHHHHHHH--------------------------c--CCcEEEEEcCCCChHHHHHhhh--hcceEEE----E
Q 025927 149 SSTIHLHRTLNQIKD--------------------------L--GAKAGVVLNPATSLSAIECVLD--VVDLVLI----M 194 (246)
Q Consensus 149 ~~~~~~~~~i~~Ik~--------------------------~--G~k~GlAlnP~Tpve~l~~~l~--~vD~VLv----M 194 (246)
.+++.++.+.++. . ..++++-|--..-++.+++++. .+|.+.+ +
T Consensus 103 --~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL 180 (256)
T 1dxe_A 103 --KEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDL 180 (256)
T ss_dssp --HHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHH
T ss_pred --HHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEChHHH
Confidence 4556666655541 1 2445555533333477778775 6888887 4
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCe
Q 025927 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 195 sV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
+..=|..++...|.++.-++++-.-..+.|...-
T Consensus 181 ~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~ 214 (256)
T 1dxe_A 181 AAALGHLGNASHPDVQKAIQHIFNRASAHGKPSG 214 (256)
T ss_dssp HHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceE
Confidence 5555888888899988888888777778876543
No 112
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=92.67 E-value=2.6 Score=36.39 Aligned_cols=162 Identities=15% Similarity=0.155 Sum_probs=101.6
Q ss_pred CCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHH
Q 025927 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDF 134 (246)
Q Consensus 56 ~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~ 134 (246)
++..+-|=+-..|..+..+..+.|.+.|++++-+..- ..-+.+.|+++++. .+..+=+- -|.+++ .++..
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~-------t~~a~~~I~~l~~~~p~~~IGAG-TVlt~~-~a~~a 81 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLR-------TEAGLAAISAIKKAVPEAIVGAG-TVCTAD-DFQKA 81 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETT-------STTHHHHHHHHHHHCTTSEEEEE-CCCSHH-HHHHH
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCC-------CccHHHHHHHHHHHCCCCeEeec-cccCHH-HHHHH
Confidence 3556778888888999999999999999999988433 23466788888774 33323232 244544 47788
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHHHcCC---cEEEEEcC--CCChHHHHHhhhhcceEEEEeecCCCCCCcccHHH
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGA---KAGVVLNP--ATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQ 209 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~---k~GlAlnP--~Tpve~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~ 209 (246)
+++||++|.-..= . .+++++.+++|+ --| .+-| .||-|...-+-.-+|+|=+ -|+. .+- -
T Consensus 82 i~AGA~fivsP~~---~---~evi~~~~~~~v~~~~~~-~~~PG~~TptE~~~A~~~Gad~vK~---FPa~---~~g--G 146 (217)
T 3lab_A 82 IDAGAQFIVSPGL---T---PELIEKAKQVKLDGQWQG-VFLPGVATASEVMIAAQAGITQLKC---FPAS---AIG--G 146 (217)
T ss_dssp HHHTCSEEEESSC---C---HHHHHHHHHHHHHCSCCC-EEEEEECSHHHHHHHHHTTCCEEEE---TTTT---TTT--H
T ss_pred HHcCCCEEEeCCC---c---HHHHHHHHHcCCCccCCC-eEeCCCCCHHHHHHHHHcCCCEEEE---Cccc---ccc--C
Confidence 9999998865421 1 246777787654 011 2223 3665655554445888854 3532 110 0
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 210 VKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 210 l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
.+-|+.++.-++ +..+..=||||.+|+++..+
T Consensus 147 ~~~lkal~~p~p----~i~~~ptGGI~~~N~~~~l~ 178 (217)
T 3lab_A 147 AKLLKAWSGPFP----DIQFCPTGGISKDNYKEYLG 178 (217)
T ss_dssp HHHHHHHHTTCT----TCEEEEBSSCCTTTHHHHHH
T ss_pred HHHHHHHHhhhc----CceEEEeCCCCHHHHHHHHH
Confidence 233444444332 46799999999999987653
No 113
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.43 E-value=0.86 Score=42.51 Aligned_cols=98 Identities=15% Similarity=0.240 Sum_probs=72.5
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCe--eEEEeccCcccchHHHHhcCCCEEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL--DVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~pl--DvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
.|....-+|+++|+++|+|.+-+=+-|-.- .+.++.||+.+++|+ |+|+ ||.. ....+++|+|.+.+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~~~-------a~al~~I~~~~~vPlvaDiHf---~~~l-al~a~e~G~dklRI 111 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHKED-------VEALEEIVKKSPMPVIADIHF---APSY-AFLSMEKGVHGIRI 111 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSHHH-------HHHHHHHHHHCSSCEEEECCS---CHHH-HHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCChHH-------HHHHHHHHhcCCCCEEEeCCC---CHHH-HHHHHHhCCCeEEE
Confidence 566677799999999999999886554222 467788888777776 6676 6644 44568899999999
Q ss_pred ccCCcc-cccHHHHHHHHHHcCCcEEEEEcCC
Q 025927 145 HCEQSS-TIHLHRTLNQIKDLGAKAGVVLNPA 175 (246)
Q Consensus 145 H~E~~~-~~~~~~~i~~Ik~~G~k~GlAlnP~ 175 (246)
.+-+.. .+.+..+++..|++|+-+=+-.|-+
T Consensus 112 NPGNig~~~~~~~vv~~ak~~~~piRIGvN~G 143 (366)
T 3noy_A 112 NPGNIGKEEIVREIVEEAKRRGVAVRIGVNSG 143 (366)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred CCcccCchhHHHHHHHHHHHcCCCEEEecCCc
Confidence 887542 2346789999999998877776654
No 114
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=92.27 E-value=1.5 Score=38.51 Aligned_cols=131 Identities=9% Similarity=0.078 Sum_probs=87.2
Q ss_pred cCCCCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEe--eeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEecc---
Q 025927 52 KFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV--DVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIV--- 125 (246)
Q Consensus 52 ~~~~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHi--DIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~--- 125 (246)
....+..+|+.|+..-+...+.++++.+...|+|.+=+ |..+. .++...=.+.++.||+.+ ++|+-+++=..
T Consensus 14 ~~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eG 91 (257)
T 2yr1_A 14 WIGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRA--IDDQERVLATANGLRNIAGEIPILFTIRSEREG 91 (257)
T ss_dssp EESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTT--TTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTT
T ss_pred eeCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccc--cCcHHHHHHHHHHHHHhccCCCEEEEEeecccC
Confidence 35566789999999999999989999988889998765 43332 111111123456778776 78998888532
Q ss_pred ------CcccchHHH---HhcC-CCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcC--CCCh-HHHHHhhh
Q 025927 126 ------EPEQRVPDF---IKAG-ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNP--ATSL-SAIECVLD 186 (246)
Q Consensus 126 ------~P~~~i~~~---~~ag-ad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP--~Tpv-e~l~~~l~ 186 (246)
.++.|++.+ ++.| +|+|-+-+.. .....++++..++.|.|+=+...- .||- +.+...+.
T Consensus 92 G~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~--~~~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~ 163 (257)
T 2yr1_A 92 GQPIPLNEAEVRRLIEAICRSGAIDLVDYELAY--GERIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMR 163 (257)
T ss_dssp CCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGG--TTHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCC--ChhHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHH
Confidence 334455544 4567 9999987763 125667788888889988777652 4663 45555443
No 115
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=92.22 E-value=0.62 Score=42.42 Aligned_cols=127 Identities=9% Similarity=0.112 Sum_probs=76.0
Q ss_pred CCCCeeEEEeccCcccchHH---HHhcCCCEEEEccCCc---------------ccccHHHHHHHHHHc-CCcEEEEEcC
Q 025927 114 TDLPLDVHLMIVEPEQRVPD---FIKAGADIVSVHCEQS---------------STIHLHRTLNQIKDL-GAKAGVVLNP 174 (246)
Q Consensus 114 t~~plDvHLMV~~P~~~i~~---~~~agad~It~H~E~~---------------~~~~~~~~i~~Ik~~-G~k~GlAlnP 174 (246)
++.|+-+.|+..+|+.+.+. +.++|+|.|-+|.=.- ....+.++++.+++. ++.+++-+.+
T Consensus 56 ~~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~ 135 (350)
T 3b0p_A 56 EEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRL 135 (350)
T ss_dssp GGCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEES
T ss_pred CCCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEec
Confidence 46799999999999877764 3457999999996210 012355677888864 7888886665
Q ss_pred CCC----hHHHHHh---hh--hcceEEEEeecC--CCCCCc---ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhh
Q 025927 175 ATS----LSAIECV---LD--VVDLVLIMSVNP--GFGGQS---FIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKN 239 (246)
Q Consensus 175 ~Tp----ve~l~~~---l~--~vD~VLvMsV~P--GfgGQ~---F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~ 239 (246)
+.. .+...++ +. -+|.|.|-.... |+.|.. .-+..++-|+++++..+ +..|.+.||| +.+.
T Consensus 136 g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~----~iPVianGgI~s~ed 211 (350)
T 3b0p_A 136 GLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP----QLTFVTNGGIRSLEE 211 (350)
T ss_dssp CBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT----TSEEEEESSCCSHHH
T ss_pred CcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC----CCeEEEECCcCCHHH
Confidence 422 1222222 22 289998865443 454431 11223555666655431 4578899999 5676
Q ss_pred hhhcc
Q 025927 240 AYKVP 244 (246)
Q Consensus 240 i~~l~ 244 (246)
+.++.
T Consensus 212 a~~~l 216 (350)
T 3b0p_A 212 ALFHL 216 (350)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 116
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=92.13 E-value=3.7 Score=36.89 Aligned_cols=161 Identities=13% Similarity=0.173 Sum_probs=108.3
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc---c
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS---S 150 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~---~ 150 (246)
+-....+++|+|.|=+=.-.= -=-+-...+..||+....++..-+-. -+.+++...+..++++|+=+|.- +
T Consensus 57 ~aA~~ae~aGAdGITvHlReD----rRHI~d~Dv~~L~~~i~t~lNlEma~--t~emi~ial~~kP~~vtLVPEkreE~T 130 (278)
T 3gk0_A 57 RAALAAEDAGADAITLHLRED----RRHIVDADVRTLRPRVKTRMNLECAV--TPEMLDIACEIRPHDACLVPEKRSELT 130 (278)
T ss_dssp HHHHHHHHTTCSEEEEECCTT----CSSSCHHHHHHHHHHCSSCEEEEECS--SHHHHHHHHHHCCSEEEECCCSGGGBC
T ss_pred HHHHHHHHcCCCEEEeccCCC----cccCCHHHHHHHHHHcCCCEEeecCC--CHHHHHHHHHcCCCEEEECCCCCCCcC
Confidence 445567889999965533221 12345667888888766666666544 33667777888999999999851 0
Q ss_pred ----------cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCC---CcccHHHHHHHHHH
Q 025927 151 ----------TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGG---QSFIESQVKKISDL 216 (246)
Q Consensus 151 ----------~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgG---Q~F~~~~l~KI~~l 216 (246)
...+..+++.+|+.|+++.|-+.|+- +.++.-.. -+|+|-+-|-. |+. ..-...-++++++.
T Consensus 131 TegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd~--~qI~aA~~~GAd~IELhTG~--YA~a~~~~~~~~el~rl~~a 206 (278)
T 3gk0_A 131 TEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDE--AQIRAAHETGAPVIELHTGR--YADAHDAAEQQREFERIATG 206 (278)
T ss_dssp SSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCH--HHHHHHHHHTCSEEEECCHH--HHTCSSHHHHHHHHHHHHHH
T ss_pred CCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHhCcCEEEEecch--hhccCCchhHHHHHHHHHHH
Confidence 11367889999999999999998863 33333221 58888886541 211 11244577888888
Q ss_pred HHHHHhcCCCCeEEEeCCCChhhhhhcccC
Q 025927 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVPNI 246 (246)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~l~~~ 246 (246)
-++..+.| +.+..=.|+|.+|++.+.+|
T Consensus 207 A~~A~~lG--L~VnAGHGL~y~Nv~~ia~i 234 (278)
T 3gk0_A 207 VDAGIALG--LKVNAGHGLHYTNVQAIAAL 234 (278)
T ss_dssp HHHHHHTT--CEEEECTTCCTTTHHHHHTC
T ss_pred HHHHHHcC--CEEecCCCCCHHHHHHHHhC
Confidence 77766665 46778889999999876543
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.01 E-value=2.4 Score=40.60 Aligned_cols=167 Identities=14% Similarity=0.169 Sum_probs=93.5
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc-------CCCCCeeEEEecc-CcccchHHHHhcCCCE
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP-------VTDLPLDVHLMIV-EPEQRVPDFIKAGADI 141 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~-------~t~~plDvHLMV~-~P~~~i~~~~~agad~ 141 (246)
..+.+.++.+.+.++..+++==-||.++-=++. .++++.+.. ...+.+-+-.-+. +....++.+.++|+|.
T Consensus 193 ~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~-~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~ 271 (511)
T 3usb_A 193 TTLSEAEKILQKYKIEKLPLVDNNGVLQGLITI-KDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDA 271 (511)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH-HHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccH-HHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccce
Confidence 457788889999999999872235665433333 344554432 0111222222212 2345677889999999
Q ss_pred EEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCCCC-----cccHHHHHHH
Q 025927 142 VSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQ-----SFIESQVKKI 213 (246)
Q Consensus 142 It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ-----~F~~~~l~KI 213 (246)
|.+....-......++++++|+. +..+.+ -+- .+.+..+.+.+. +|.|.+ ...||.-.- .+-...+.-+
T Consensus 272 I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~-g~v-~t~e~a~~~~~aGad~i~v-g~g~gsi~~~~~~~g~g~p~~~~l 348 (511)
T 3usb_A 272 IVLDTAHGHSQGVIDKVKEVRAKYPSLNIIA-GNV-ATAEATKALIEAGANVVKV-GIGPGSICTTRVVAGVGVPQLTAV 348 (511)
T ss_dssp EEEECSCTTSHHHHHHHHHHHHHCTTSEEEE-EEE-CSHHHHHHHHHHTCSEEEE-CSSCSTTCCHHHHHCCCCCHHHHH
T ss_pred EEecccccchhhhhhHHHHHHHhCCCceEEe-eee-ccHHHHHHHHHhCCCEEEE-CCCCccccccccccCCCCCcHHHH
Confidence 99964421123456788888876 344332 122 355666666554 899886 555543000 0112234455
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCC-hhhhhh
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGVG-PKNAYK 242 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~ 242 (246)
.++++..++. +..+..||||. .+.+.+
T Consensus 349 ~~v~~~~~~~--~iPVIa~GGI~~~~di~k 376 (511)
T 3usb_A 349 YDCATEARKH--GIPVIADGGIKYSGDMVK 376 (511)
T ss_dssp HHHHHHHHTT--TCCEEEESCCCSHHHHHH
T ss_pred HHHHHHHHhC--CCcEEEeCCCCCHHHHHH
Confidence 6666665543 45688999994 444443
No 118
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=91.80 E-value=0.73 Score=41.12 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=91.2
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCCCeeEEEeccCcccchHHHHhcCCCEEEEcc-CCc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHC-EQS 149 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~-E~~ 149 (246)
+.++.+...|+||+=+|.-|+. +..+.+..... ..+.+.-|=+--.+|. .+....++|++.|.+.. |+
T Consensus 51 ~~~e~a~~~GaD~v~lDlEh~~------~~~~~~~~~l~a~~~~~~~~~VRv~~~d~~-di~~~ld~ga~~ImlP~V~s- 122 (287)
T 2v5j_A 51 YSAELLAGAGFDWLLIDGEHAP------NNVQTVLTQLQAIAPYPSQPVVRPSWNDPV-QIKQLLDVGTQTLLVPMVQN- 122 (287)
T ss_dssp HHHHHHHTSCCSEEEEESSSSS------CCHHHHHHHHHHHTTSSSEEEEECSSSCHH-HHHHHHHTTCCEEEESCCCS-
T ss_pred HHHHHHHhCCCCEEEEeCCCcc------chHHHHHHHHHHHHhcCCCEEEEECCCCHH-HHHHHHhCCCCEEEeCCCCC-
Confidence 4567778899999999999983 23344433321 1233333332223443 57788889999888764 42
Q ss_pred ccccHHHHHHHHHH-----cC------------------------CcEEEEEcCCCChHHHHHhhh--hcceEEE----E
Q 025927 150 STIHLHRTLNQIKD-----LG------------------------AKAGVVLNPATSLSAIECVLD--VVDLVLI----M 194 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~-----~G------------------------~k~GlAlnP~Tpve~l~~~l~--~vD~VLv----M 194 (246)
.++..++.+.+|. .| +.+++-|--..-++.+++++. .+|.+.+ +
T Consensus 123 -aeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DL 201 (287)
T 2v5j_A 123 -ADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADL 201 (287)
T ss_dssp -HHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHH
T ss_pred -HHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHH
Confidence 3456666655431 11 345555533333477888875 5888777 4
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 195 sV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
+..=|..++...|+++.-++++-....+.|...
T Consensus 202 s~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~ 234 (287)
T 2v5j_A 202 SADMGYAGNPQHPEVQAAIEQAIVQIRESGKAP 234 (287)
T ss_dssp HHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEE
T ss_pred HHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCee
Confidence 555578888899998888888877777777643
No 119
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=91.47 E-value=0.66 Score=40.73 Aligned_cols=145 Identities=14% Similarity=0.172 Sum_probs=90.6
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhh-cccC--CCCCeeEEEeccCcccchHHHHhcCCCEEEEc-cCCc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDA-LRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH-CEQS 149 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~-ir~~--t~~plDvHLMV~~P~~~i~~~~~agad~It~H-~E~~ 149 (246)
+.++.+..+|+||+=+|.-|+.+- .+.+.. ++.. .+.+.-|=+--.+| ..+....++|++.|.+. +|+
T Consensus 30 ~~~e~a~~~GaD~v~lDlE~~~~~------~~~~~~~~~a~~~~~~~~~VRv~~~~~-~~i~~~l~~g~~~I~~P~V~s- 101 (267)
T 2vws_A 30 YMAEIAATSGYDWLLIDGEHAPNT------IQDLYHQLQAVAPYASQPVIRPVEGSK-PLIKQVLDIGAQTLLIPMVDT- 101 (267)
T ss_dssp HHHHHHHTTCCSEEEEETTTSCCC------HHHHHHHHHHHTTSSSEEEEECSSCCH-HHHHHHHHTTCCEEEECCCCS-
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCC------HHHHHHHHHHHHhCCCcEEEEeCCCCH-HHHHHHHHhCCCEEEeCCCCC-
Confidence 556777889999999999998532 233322 2221 22222222222233 35677788999977776 453
Q ss_pred ccccHHHHHHHHHHc-----------------C----------CcEEEEEcCCCCh--HHHHHhhhh--cceEEE----E
Q 025927 150 STIHLHRTLNQIKDL-----------------G----------AKAGVVLNPATSL--SAIECVLDV--VDLVLI----M 194 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~~-----------------G----------~k~GlAlnP~Tpv--e~l~~~l~~--vD~VLv----M 194 (246)
.++..++.+.++.. | -...+...-+|+- +.+++++.. +|.+.+ +
T Consensus 102 -~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL 180 (267)
T 2vws_A 102 -AEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADL 180 (267)
T ss_dssp -HHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHH
T ss_pred -HHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHH
Confidence 35566666655310 1 0123444446654 778888754 899888 5
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 195 sV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
+..-|..++...|+++.-++++-.-..+.|...
T Consensus 181 ~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~ 213 (267)
T 2vws_A 181 SASLGYPDNAGHPEVQRIIETSIRRIRAAGKAA 213 (267)
T ss_dssp HHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeE
Confidence 556688888889998888888877777777644
No 120
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=91.34 E-value=0.39 Score=43.27 Aligned_cols=77 Identities=14% Similarity=0.152 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcC---CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeE
Q 025927 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 154 ~~~~i~~Ik~~G---~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I 229 (246)
....++.+|+.. .++++-. +|. +.+.+.++ -+|+|.+-+ |.++.++ ++++.++....+..|
T Consensus 183 ~~~ai~~~r~~~~~~~~i~vev--~tl-ee~~~A~~aGaD~I~ld~---------~~~~~l~---~~v~~l~~~~~~~~I 247 (299)
T 2jbm_A 183 VEKAVRAARQAADFALKVEVEC--SSL-QEAVQAAEAGADLVLLDN---------FKPEELH---PTATVLKAQFPSVAV 247 (299)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEE--SSH-HHHHHHHHTTCSEEEEES---------CCHHHHH---HHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHhCCcCCeEEEec--CCH-HHHHHHHHcCCCEEEECC---------CCHHHHH---HHHHHhhccCCCeeE
Confidence 345666666643 5667644 343 55555443 599999866 3344444 444455444445789
Q ss_pred EEeCCCChhhhhhccc
Q 025927 230 EVDGGVGPKNAYKVPN 245 (246)
Q Consensus 230 ~VDGGI~~e~i~~l~~ 245 (246)
++-||||++|++++.+
T Consensus 248 ~ASGGIt~~ni~~~~~ 263 (299)
T 2jbm_A 248 EASGGITLDNLPQFCG 263 (299)
T ss_dssp EEESSCCTTTHHHHCC
T ss_pred EEECCCCHHHHHHHHH
Confidence 9999999999998865
No 121
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=91.12 E-value=0.92 Score=39.79 Aligned_cols=144 Identities=17% Similarity=0.197 Sum_probs=91.8
Q ss_pred HHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc----CcccchHHHHhcCCCEEEEc-cCCcc
Q 025927 76 VKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV----EPEQRVPDFIKAGADIVSVH-CEQSS 150 (246)
Q Consensus 76 i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~----~P~~~i~~~~~agad~It~H-~E~~~ 150 (246)
++.+...|+||+=+|.-|+.+-.. .....++.... -.+..+|. +| ..++...++|++.|.+. +|+
T Consensus 30 ~e~a~~~g~D~vilDlEhav~~~~-----k~~~~l~a~~~--~~~~~~VRVn~~~~-~di~~~ld~G~~gI~lP~v~s-- 99 (261)
T 3qz6_A 30 VRIYAEAGLDYFIVDCEHAAYTFR-----EINHLVSVAKN--AGVSVLVRIPQVDR-AHVQRLLDIGAEGFMIPGVQS-- 99 (261)
T ss_dssp HHHHHHTTCSEEEEESSSSCCCHH-----HHHHHHHHHHH--HTCEEEEECSSCCH-HHHHHHHHHTCCEEEETTCCS--
T ss_pred HHHHhcCCcCEEEEeccCCCCCHH-----HHHHHHHHHhh--cCCeEEEEeCCCCH-HHHHHHHhcCCCEEEECCcCC--
Confidence 456667899999999999977432 22222322100 11233443 23 35778888999987776 563
Q ss_pred cccHHHHHHHHHH-----------------------------cCCcEEEEEcCCCChHHHHHhh--hhcceEEE----Ee
Q 025927 151 TIHLHRTLNQIKD-----------------------------LGAKAGVVLNPATSLSAIECVL--DVVDLVLI----MS 195 (246)
Q Consensus 151 ~~~~~~~i~~Ik~-----------------------------~G~k~GlAlnP~Tpve~l~~~l--~~vD~VLv----Ms 195 (246)
.+++.++.+.+|. ..+++++.|--..-++.+++++ +.+|.+.+ ++
T Consensus 100 aed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~iG~~DL~ 179 (261)
T 3qz6_A 100 AETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLS 179 (261)
T ss_dssp HHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHTSTTCCEEEECHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhCCCCCCEEEECHHHHH
Confidence 4566666666531 1234555554444457888888 67899888 45
Q ss_pred ecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeE
Q 025927 196 VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 196 V~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I 229 (246)
..=|..++...|+++.-++++-....+.|...-+
T Consensus 180 ~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~ 213 (261)
T 3qz6_A 180 NDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGF 213 (261)
T ss_dssp HHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEE
Confidence 5557778888888888888877777777765433
No 122
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=91.04 E-value=0.6 Score=44.64 Aligned_cols=91 Identities=19% Similarity=0.232 Sum_probs=59.7
Q ss_pred CcccchHHHHhcCCCEEEE---ccCCcc-----------c--------cc-HHHHHHHHHHcCCcEEEEEcCCCChHHHH
Q 025927 126 EPEQRVPDFIKAGADIVSV---HCEQSS-----------T--------IH-LHRTLNQIKDLGAKAGVVLNPATSLSAIE 182 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~---H~E~~~-----------~--------~~-~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~ 182 (246)
||+.|++.+.++|+.++.+ |-+.++ . .| +.++.+.+|+.|+|+|+-++|-. .-.
T Consensus 55 d~~~w~~~~k~aGaky~v~takHHdGf~lw~S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~~d---w~~ 131 (469)
T 3eyp_A 55 DCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGPHD---RHE 131 (469)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECSSC---HHH
T ss_pred CHHHHHHHHHHcCCCEEEEEEEeCCCccccCCCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeChhH---hCC
Confidence 7889999999999998876 554320 0 02 34788889999999999998722 222
Q ss_pred HhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCC
Q 025927 183 CVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG 234 (246)
Q Consensus 183 ~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGG 234 (246)
++ .|.|+-..|..... .++++++...|.-..++.||+
T Consensus 132 ~~------------~~~y~~~~Y~~~~~---~Ql~ELlt~Yg~i~~lW~Dg~ 168 (469)
T 3eyp_A 132 HL------------SPLYTTERYKEYYA---HQLGELMSDYGKIWETWWDGA 168 (469)
T ss_dssp HT------------STTCCHHHHHHHHH---HHHHHHHHSSCCCCEEECCCT
T ss_pred Cc------------CcccCcHHHHHHHH---HHHHHHHhcCCcccEEEeCCC
Confidence 11 25555444555444 466667665553235788885
No 123
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=90.89 E-value=4.5 Score=32.99 Aligned_cols=154 Identities=9% Similarity=0.042 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHHc-CCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccC----cccchHHHHhcCCCEEEE
Q 025927 70 AKLGEQVKAVELA-GCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVE----PEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 70 ~~l~~~i~~l~~~-g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~----P~~~i~~~~~agad~It~ 144 (246)
..+.++++.+.+. |...-++-+..|...-+-.+=.++++.+++. ++ .+.+.+.- ....++.+.+. ++.|.+
T Consensus 53 ~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~~~l~~l~~~~~~~-~~--~i~i~Tng~~~~~~~~~~~l~~~-~~~v~i 128 (245)
T 3c8f_A 53 EDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKE-GI--HTCLDTNGFVRRYDPVIDELLEV-TDLVML 128 (245)
T ss_dssp HHHHHHHGGGHHHHTSTTCEEEEEESCGGGGHHHHHHHHHHHHTT-TC--CEEEEECCCCCCCCHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHHhhhhhcCCCCeEEEECCCcCCCHHHHHHHHHHHHHc-CC--cEEEEeCCCcCcCHHHHHHHHHh-CCEEEE
Confidence 4455555544332 1112344566675322211112445555553 33 34443321 22345566666 788888
Q ss_pred ccCCcc-----------cccHHHHHHHHHHcCCcEEEE--EcCCC--ChHHHH---Hhhhh---cceEEEEeecC-CCC-
Q 025927 145 HCEQSS-----------TIHLHRTLNQIKDLGAKAGVV--LNPAT--SLSAIE---CVLDV---VDLVLIMSVNP-GFG- 201 (246)
Q Consensus 145 H~E~~~-----------~~~~~~~i~~Ik~~G~k~GlA--lnP~T--pve~l~---~~l~~---vD~VLvMsV~P-Gfg- 201 (246)
-+++.. .+...+.++.+++.|.++.+. +.|+. ..+.+. .++.. ++.+.++...| |..
T Consensus 129 sld~~~~~~~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3c8f_A 129 DLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHK 208 (245)
T ss_dssp ECCCSSHHHHHHHHSSCSHHHHHHHHHHHHHTCCEEEEEEECTTTTCCHHHHHHHHHHHHHHCCEEEEEEEECCCCSHHH
T ss_pred eCCCCCHHHhhhccCCCHHHHHHHHHHHHhcCCEEEEEEeecCCCCCCHHHHHHHHHHHHhcCCCceeEEEeccccChhH
Confidence 777531 123456777888999887654 66652 234444 44444 36677787777 211
Q ss_pred ---------CCcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 202 ---------GQSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 202 ---------GQ~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
-+.+.+...+.++++.+...+.|+.+
T Consensus 209 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 243 (245)
T 3c8f_A 209 WVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKV 243 (245)
T ss_dssp HHHTTCCCTTTTCCCCCHHHHHHHHHHHHTTTCCB
T ss_pred HHhhCcccccccCCCCCHHHHHHHHHHHHhcCCee
Confidence 11223445566777888887777653
No 124
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.78 E-value=0.96 Score=41.11 Aligned_cols=122 Identities=24% Similarity=0.206 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcc-----cC--CC---CCC----------HHHHhhcccCCCCCeeEEEecc-----
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRF-----VP--NI---TIG----------PLVVDALRPVTDLPLDVHLMIV----- 125 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~F-----Vp--N~---tfg----------p~~I~~ir~~t~~plDvHLMV~----- 125 (246)
.+.+..++++++|.|.+-+..--|.. .| |- .+| -++++++|+..++|+-+-|=..
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~ 224 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPD 224 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTT
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCC
Confidence 33445566778899988777654321 12 11 233 6789999987788888877643
Q ss_pred -----CcccchHHHHhcCCCEEEEccCCc-------ccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh--cce
Q 025927 126 -----EPEQRVPDFIKAGADIVSVHCEQS-------STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV--VDL 190 (246)
Q Consensus 126 -----~P~~~i~~~~~agad~It~H~E~~-------~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~--vD~ 190 (246)
++..+++.+.++|+|+|++|.-.. .......++..||+.- +.=|..+-+ +..+..+.+|.. +|+
T Consensus 225 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~ 303 (340)
T 3gr7_A 225 GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADL 303 (340)
T ss_dssp SCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeE
Confidence 344567788889999999983110 0111245677788653 222444444 577888888865 898
Q ss_pred EEE
Q 025927 191 VLI 193 (246)
Q Consensus 191 VLv 193 (246)
|.+
T Consensus 304 V~i 306 (340)
T 3gr7_A 304 VFL 306 (340)
T ss_dssp EEE
T ss_pred EEe
Confidence 876
No 125
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=90.54 E-value=1.2 Score=42.75 Aligned_cols=89 Identities=18% Similarity=0.251 Sum_probs=57.9
Q ss_pred CcccchHHHHhcCCCEEEE---ccCCcc-------------c------cc-HHHHHHHHHHcCCcEEEEEcCCCChHHHH
Q 025927 126 EPEQRVPDFIKAGADIVSV---HCEQSS-------------T------IH-LHRTLNQIKDLGAKAGVVLNPATSLSAIE 182 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~---H~E~~~-------------~------~~-~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~ 182 (246)
||+.|++.+.++|+.++.+ |.+.++ . .| +.++.+.+|+.|+|+|+-+++-.
T Consensus 63 d~~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~~d------ 136 (478)
T 3ues_A 63 DVDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSPWD------ 136 (478)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECSCC------
T ss_pred CHHHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeChHH------
Confidence 7889999999999998876 655320 0 23 45777889999999999988731
Q ss_pred HhhhhcceEEEEeecCCCCC-CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC
Q 025927 183 CVLDVVDLVLIMSVNPGFGG-QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV 235 (246)
Q Consensus 183 ~~l~~vD~VLvMsV~PGfgG-Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI 235 (246)
. -.|.|+. +.|..... .++++++...|.-..|+.||+-
T Consensus 137 -------~-----~~~~y~~~~~y~~~~~---~ql~EL~~~Yg~~~~~W~Dg~~ 175 (478)
T 3ues_A 137 -------R-----TEESYGKGKAYDDFYV---GQLTELLTQYGPIFSVWLDGAN 175 (478)
T ss_dssp -------S-----SCTTTTSSHHHHHHHH---HHHHHHHHSSSCCSEEEECCCC
T ss_pred -------h-----CCcccCchHHHHHHHH---HHHHHHHhcCCcceEEEeeCCC
Confidence 1 1233432 23444443 3566666655543467788764
No 126
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=90.31 E-value=0.95 Score=43.85 Aligned_cols=164 Identities=13% Similarity=0.089 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCccc--CCCCCCHHHHhhcccCCCCCeeEEEeccCcc----------cchHHHHhcC
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFV--PNITIGPLVVDALRPVTDLPLDVHLMIVEPE----------QRVPDFIKAG 138 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FV--pN~tfgp~~I~~ir~~t~~plDvHLMV~~P~----------~~i~~~~~ag 138 (246)
+..+..+++++.|+|++|+==+||..- ++-.-..+.|+++++.+++|+.+===+.+.+ .-++.+.++|
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aG 360 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSG 360 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcC
Confidence 445667888889999999855676331 1112235678888776666644221233321 3378889999
Q ss_pred CCEEEEccCCcccccH------------HHHHHHH-HHcCC-cEEEEEcCC-----------------------------
Q 025927 139 ADIVSVHCEQSSTIHL------------HRTLNQI-KDLGA-KAGVVLNPA----------------------------- 175 (246)
Q Consensus 139 ad~It~H~E~~~~~~~------------~~~i~~I-k~~G~-k~GlAlnP~----------------------------- 175 (246)
||.|.+=..+. .++ ..+++.+ ++.|- ++-+++...
T Consensus 361 ad~V~igt~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (555)
T 1jvn_A 361 ADKVSIGTDAV--YAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCW 438 (555)
T ss_dssp CSEEEECHHHH--HHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEE
T ss_pred CCEEEECCHHh--hCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCccee
Confidence 99999876542 211 1234444 34563 455666542
Q ss_pred -----------C---ChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC-Chhh
Q 025927 176 -----------T---SLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKN 239 (246)
Q Consensus 176 -----------T---pve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI-~~e~ 239 (246)
| .++..+.+-+. +|.|++..+.-.-..+.++-+.+++++ +.. +..+-.=||| +.+.
T Consensus 439 ~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~---~~~-----~iPVIasGGi~s~~d 510 (555)
T 1jvn_A 439 YQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVK---DAV-----KIPVIASSGAGVPEH 510 (555)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHH---HHC-----SSCEEECSCCCSHHH
T ss_pred EEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHH---HhC-----CccEEEECCCCCHHH
Confidence 1 23555555444 899999888763333345544444443 321 3457778999 5566
Q ss_pred hhhcc
Q 025927 240 AYKVP 244 (246)
Q Consensus 240 i~~l~ 244 (246)
+.++.
T Consensus 511 ~~~~~ 515 (555)
T 1jvn_A 511 FEEAF 515 (555)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 127
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=90.25 E-value=1.3 Score=38.87 Aligned_cols=161 Identities=11% Similarity=-0.003 Sum_probs=98.1
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCC-EEEeeeccCcccCCC----CCC------HHHHhhcccCCCCCeeEEEecc
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCD-WIHVDVMDGRFVPNI----TIG------PLVVDALRPVTDLPLDVHLMIV 125 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d-~lHiDIMDG~FVpN~----tfg------p~~I~~ir~~t~~plDvHLMV~ 125 (246)
+..+..++...+...+.+.++.++++|+| .+-+.+- .||. .|| .++++++|+.+++|+-+=+-..
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~----~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLS----CPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESC----CCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEecc----CCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 34566788888889999999999999999 8877653 3443 233 4678888988788887754322
Q ss_pred -Ccc---cchHHHHhcCCCEEEEccCC-----cc------------------cc----cHHHHHHHHHHcC-CcEEEEEc
Q 025927 126 -EPE---QRVPDFIKAGADIVSVHCEQ-----SS------------------TI----HLHRTLNQIKDLG-AKAGVVLN 173 (246)
Q Consensus 126 -~P~---~~i~~~~~agad~It~H~E~-----~~------------------~~----~~~~~i~~Ik~~G-~k~GlAln 173 (246)
+++ ++.+.+.++|+|.|++|--. .. .. ...+.+..+++.= -++=|..+
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 111 22566677899999987321 00 00 1145677777541 13444545
Q ss_pred CC-CChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHH-HHHHHHHhcCCC
Q 025927 174 PA-TSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKIS-DLRRMCLEKGVN 226 (246)
Q Consensus 174 P~-Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~-~lr~l~~~~~~~ 226 (246)
-+ .+.++..+++. -+|.|.+=+-- .. -.|..+++|+ .+++++.+.|+.
T Consensus 249 GGI~~~~da~~~l~~GAd~V~vg~~~--l~---~~p~~~~~i~~~l~~~l~~~g~~ 299 (311)
T 1jub_A 249 GGIETGQDAFEHLLCGATMLQIGTAL--HK---EGPAIFDRIIKELEEIMNQKGYQ 299 (311)
T ss_dssp SSCCSHHHHHHHHHHTCSEEEECHHH--HH---HCTHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHcCCCEEEEchHH--Hh---cCcHHHHHHHHHHHHHHHHcCCC
Confidence 44 45566666554 48988763320 00 0245666665 466677776653
No 128
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=90.06 E-value=2.2 Score=39.07 Aligned_cols=130 Identities=15% Similarity=0.109 Sum_probs=69.8
Q ss_pred HHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCC-----ccc-ccHHHHHHHHHH-cCCcEEEEEcCCCCh
Q 025927 106 VVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ-----SST-IHLHRTLNQIKD-LGAKAGVVLNPATSL 178 (246)
Q Consensus 106 ~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~-----~~~-~~~~~~i~~Ik~-~G~k~GlAlnP~Tpv 178 (246)
.++.+++. +.++-+-+...++..+.+.+.++|+|.+.+|... ... ..+.. +.++++ .++.+-+ .--++.
T Consensus 147 ~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~-i~~l~~~~~~pvi~--ggi~t~ 222 (393)
T 2qr6_A 147 RIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALN-LKEFIGSLDVPVIA--GGVNDY 222 (393)
T ss_dssp HHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----C-HHHHHHHCSSCEEE--ECCCSH
T ss_pred HHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHH-HHHHHHhcCCCEEE--CCcCCH
Confidence 34444543 6666666655555666777778999999998431 000 02233 445554 3544433 334566
Q ss_pred HHHHHhhhh-cceEEEEeecCCCCCCcc---cHHHHHHHHHHHHH----HHhcCC-CCeEEEeCCCC-hhhhh
Q 025927 179 SAIECVLDV-VDLVLIMSVNPGFGGQSF---IESQVKKISDLRRM----CLEKGV-NPWIEVDGGVG-PKNAY 241 (246)
Q Consensus 179 e~l~~~l~~-vD~VLvMsV~PGfgGQ~F---~~~~l~KI~~lr~l----~~~~~~-~~~I~VDGGI~-~e~i~ 241 (246)
+..+.+++. +|.|.+ +. -|.+|..+ -+.+++-+.++++. +++.+. ++.|..||||+ .+.+.
T Consensus 223 e~a~~~~~~Gad~i~v-g~-Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~ 293 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIV-GG-GENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVV 293 (393)
T ss_dssp HHHHHHHTTTCSEEEE-SC-CSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHH
T ss_pred HHHHHHHHcCCCEEEE-CC-CcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHH
Confidence 777777654 999988 43 12222111 12344444444443 232332 26799999996 43443
No 129
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=89.99 E-value=1.1 Score=37.85 Aligned_cols=126 Identities=14% Similarity=0.084 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEe----c------cCcccchHHHHhcCCC
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM----I------VEPEQRVPDFIKAGAD 140 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLM----V------~~P~~~i~~~~~agad 140 (246)
.+.+.++.+.+.|.+.+-+-.- .+.| .. ....+++..+..++.+..|-- . ..-.+.++...+.|+.
T Consensus 24 ~~~~~l~~a~~~G~~~vEl~~~--~~~~-~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~ 99 (264)
T 1yx1_A 24 GQASFLPLLAMAGAQRVELREE--LFAG-PP-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAG 99 (264)
T ss_dssp CGGGGHHHHHHHTCSEEEEEGG--GCSS-CC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCCEEEEEHH--hcCC-CH-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCC
Confidence 3467889999999998877432 2333 22 455555444445776665521 1 1112344444567999
Q ss_pred EEEEccCCcc-cccHHHHHHHHHHcCCcEEEEEcCC---CChHHHHHhhhhc---ceEEEEeecCCC
Q 025927 141 IVSVHCEQSS-TIHLHRTLNQIKDLGAKAGVVLNPA---TSLSAIECVLDVV---DLVLIMSVNPGF 200 (246)
Q Consensus 141 ~It~H~E~~~-~~~~~~~i~~Ik~~G~k~GlAlnP~---Tpve~l~~~l~~v---D~VLvMsV~PGf 200 (246)
+|.+|.-... ...+.++.+..++.|+++++=-.+. ..++.+..+++.+ |-=+-+..++|+
T Consensus 100 ~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~vg~~~D~g~ 166 (264)
T 1yx1_A 100 WLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLDLAMTFDIGN 166 (264)
T ss_dssp EEEEEEECCCSSCCHHHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHHHHTTCSEEEEEETTG
T ss_pred EEEEecCCCCcHHHHHHHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHHHhcCCCeEEEEehhh
Confidence 9999965321 2257778888888888776654333 2356677777776 321667778873
No 130
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=89.92 E-value=1.5 Score=39.24 Aligned_cols=77 Identities=19% Similarity=0.288 Sum_probs=53.6
Q ss_pred HHHHHHHHHHcC---CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeE
Q 025927 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 154 ~~~~i~~Ik~~G---~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I 229 (246)
+...++..|+.. .++++-.. | ++.+++.+. -+|+|++=. |.++.+++ +.+.+...+.+..|
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~--t-leea~eA~~aGaD~I~LDn---------~~~e~l~~---av~~l~~~~~~v~i 243 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVE--N-LEDALRAVEAGADIVMLDN---------LSPEEVKD---ISRRIKDINPNVIV 243 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEES--S-HHHHHHHHHTTCSEEEEES---------CCHHHHHH---HHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHhCCCCceEEEEeC--C-HHHHHHHHHcCCCEEEECC---------CCHHHHHH---HHHHhhccCCCceE
Confidence 556788888776 67888653 3 677777665 489987754 44555544 44444443345789
Q ss_pred EEeCCCChhhhhhccc
Q 025927 230 EVDGGVGPKNAYKVPN 245 (246)
Q Consensus 230 ~VDGGI~~e~i~~l~~ 245 (246)
++=||||++|++++.+
T Consensus 244 eASGGIt~eni~~~a~ 259 (285)
T 1o4u_A 244 EVSGGITEENVSLYDF 259 (285)
T ss_dssp EEEECCCTTTGGGGCC
T ss_pred EEECCCCHHHHHHHHH
Confidence 9999999999999875
No 131
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=89.76 E-value=1 Score=42.65 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=60.8
Q ss_pred CcccchHHHHhcCCCEEEE---ccCCc-----------c-----ccc-HHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh
Q 025927 126 EPEQRVPDFIKAGADIVSV---HCEQS-----------S-----TIH-LHRTLNQIKDLGAKAGVVLNPATSLSAIECVL 185 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~---H~E~~-----------~-----~~~-~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l 185 (246)
||+.|++.+.++|+.++.+ |-|.+ . ..| +.++.+.+|+.|+|+|+-+++-. . ..+..
T Consensus 79 Dp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~GlY~S~~d-w--~~p~y 155 (450)
T 2wvv_A 79 DAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFSVMD-W--SNPDY 155 (450)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEEEEEEESCC-T--TCTTC
T ss_pred CHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeEEEEecHHH-h--cCCcc
Confidence 8899999999999998766 44432 0 113 56788889999999999999741 1 11110
Q ss_pred hhcceEEEEeecCCCCC-----CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 186 DVVDLVLIMSVNPGFGG-----QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 186 ~~vD~VLvMsV~PGfgG-----Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
. . .|.+.. +.|.+.++ .++++++..-|.--.|..||+-..
T Consensus 156 ~-~--------~~~~~~~~~~~~~y~~~~~---~Ql~ELlt~YG~~d~lWfDg~~~~ 200 (450)
T 2wvv_A 156 R-Y--------DIKSKEDSIAFSRFLEFTD---NQLKELATRYPTVKDFWFDGTWDA 200 (450)
T ss_dssp C-S--------SCCSHHHHHHHHHHHHHHH---HHHHHHHHHCTTCCEEEEESCCSH
T ss_pred c-c--------cccccccccchHHHHHHHH---HHHHHHHHcCCCcCEEEEcCCCCc
Confidence 0 0 122211 33444444 466677766543346899998653
No 132
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=89.64 E-value=1.3 Score=40.56 Aligned_cols=122 Identities=13% Similarity=0.152 Sum_probs=83.8
Q ss_pred CCCCCeeEEEeccCcccchHHHHh---cCCC-EEEEccCC--------c--ccccHHHHHHHHHHc-CCcEEEEEcCCCC
Q 025927 113 VTDLPLDVHLMIVEPEQRVPDFIK---AGAD-IVSVHCEQ--------S--STIHLHRTLNQIKDL-GAKAGVVLNPATS 177 (246)
Q Consensus 113 ~t~~plDvHLMV~~P~~~i~~~~~---agad-~It~H~E~--------~--~~~~~~~~i~~Ik~~-G~k~GlAlnP~Tp 177 (246)
..+.|+-+-|.-.+|+.|++.... +|++ +|.+.+=+ . ..+.+.++++.+|+. .+-+.+=|.|++.
T Consensus 126 ~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~ 205 (345)
T 3oix_A 126 PDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFD 205 (345)
T ss_dssp TTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCC
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCC
Confidence 357899999999999999875533 5776 99988631 1 112356777777765 5778999999998
Q ss_pred hHHHHHhhhh-----cceEEEE-------eec------------CCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeC
Q 025927 178 LSAIECVLDV-----VDLVLIM-------SVN------------PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG 233 (246)
Q Consensus 178 ve~l~~~l~~-----vD~VLvM-------sV~------------PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDG 233 (246)
.+.+...++. +|+|... .++ -|++|.+..|..++-|+++++..+ -++.|...|
T Consensus 206 ~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~---~~ipIIg~G 282 (345)
T 3oix_A 206 IVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLN---PSIQIIGTG 282 (345)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSC---TTSEEEEES
T ss_pred HHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcC---CCCcEEEEC
Confidence 8888777653 4544321 222 135667777878887777766542 246788999
Q ss_pred CCCh
Q 025927 234 GVGP 237 (246)
Q Consensus 234 GI~~ 237 (246)
||..
T Consensus 283 GI~s 286 (345)
T 3oix_A 283 GVXT 286 (345)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 9964
No 133
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=89.61 E-value=3.5 Score=38.51 Aligned_cols=157 Identities=13% Similarity=0.217 Sum_probs=92.1
Q ss_pred hhhHHHHHHHHHHc----CCCEEEeeeccCcccCCCCCCHHH----HhhcccCCCCC--eeEEEeccCcc----cchHHH
Q 025927 69 FAKLGEQVKAVELA----GCDWIHVDVMDGRFVPNITIGPLV----VDALRPVTDLP--LDVHLMIVEPE----QRVPDF 134 (246)
Q Consensus 69 ~~~l~~~i~~l~~~----g~d~lHiDIMDG~FVpN~tfgp~~----I~~ir~~t~~p--lDvHLMV~~P~----~~i~~~ 134 (246)
...+.+|++.+.+. +++.+| +-+|.. . .+.++. ++.+++..+++ ..+.+- .||. ..++.+
T Consensus 86 ~~~l~~Ei~~~~~~~~~~~i~~i~--fgGGtp--t-~l~~~~l~~ll~~i~~~~~~~~~~eitie-~~p~~l~~e~l~~L 159 (457)
T 1olt_A 86 LDALEQEIVHRAPLFAGRHVSQLH--WGGGTP--T-YLNKAQISRLMKLLRENFQFNADAEISIE-VDPREIELDVLDHL 159 (457)
T ss_dssp HHHHHHHHHHHGGGGTTCCEEEEE--EEESCG--G-GSCHHHHHHHHHHHHHHSCEEEEEEEEEE-ECSSSCCTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEE--EeCCCc--c-cCCHHHHHHHHHHHHHhCCCCCCcEEEEE-EccCcCCHHHHHHH
Confidence 34566777666543 234444 456643 2 234444 44445432222 344443 3775 568889
Q ss_pred HhcCCCEEEEccCCcc------------cccHHHHHHHHHHcCCc-EEEEEc---CCCChHHHHHhhhh-----cceEEE
Q 025927 135 IKAGADIVSVHCEQSS------------TIHLHRTLNQIKDLGAK-AGVVLN---PATSLSAIECVLDV-----VDLVLI 193 (246)
Q Consensus 135 ~~agad~It~H~E~~~------------~~~~~~~i~~Ik~~G~k-~GlAln---P~Tpve~l~~~l~~-----vD~VLv 193 (246)
.++|+++|++-+|+.. .++..+.++.+|+.|++ +++-+- |+...+.+..-++. +|.|-+
T Consensus 160 ~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~ 239 (457)
T 1olt_A 160 RAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSV 239 (457)
T ss_dssp HHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEe
Confidence 9999999999988642 12356788889999987 655543 56666666655542 677777
Q ss_pred Eee--cCCC-CCCcc--------cHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 025927 194 MSV--NPGF-GGQSF--------IESQVKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 194 MsV--~PGf-gGQ~F--------~~~~l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
... .||. ..|.. .++..+..+.+.+.+.+.|+. .+++|
T Consensus 240 y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~-~yeis 288 (457)
T 1olt_A 240 FNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQ-FIGMD 288 (457)
T ss_dssp EECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCE-EEETT
T ss_pred ecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCe-EEEec
Confidence 654 4773 22211 133445566667777788764 46654
No 134
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=89.56 E-value=1.5 Score=38.12 Aligned_cols=146 Identities=19% Similarity=0.184 Sum_probs=90.8
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
+.++++.++|.|.+=+=.-+|.-..| -.+.++++|+ +++|+- ||..+|..+. .|+|.+.|.-=-. ..+
T Consensus 22 ~~~~~~~~~GtD~i~vGGs~gvt~~~---~~~~v~~ik~-~~~Pvv--lfp~~~~~v~-----~gaD~~l~pslln-~~~ 89 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIGGSDGVTEDN---VLRMMSKVRR-FLVPCV--LEVSAIEAIV-----PGFDLYFIPSVLN-SKN 89 (228)
T ss_dssp THHHHHHTSSCSEEEECCCSCCCHHH---HHHHHHHHTT-SSSCEE--EECSCGGGCC-----SCCSEEEEEEETT-BSS
T ss_pred HHHHHHHHcCCCEEEECCcCCCCHHH---HHHHHHHhhc-cCCCEE--EeCCCHHHcc-----ccCCEEEEeeecC-CCC
Confidence 45666788999999887766643322 2457788887 777754 6999987653 5999998873211 112
Q ss_pred H----HHHHHHHHHcCC-----cEE----EEEcCCCCh------------HHHHHhhhhc-----ceEEEEeecCCCCCC
Q 025927 154 L----HRTLNQIKDLGA-----KAG----VVLNPATSL------------SAIECVLDVV-----DLVLIMSVNPGFGGQ 203 (246)
Q Consensus 154 ~----~~~i~~Ik~~G~-----k~G----lAlnP~Tpv------------e~l~~~l~~v-----D~VLvMsV~PGfgGQ 203 (246)
+ ..-.+.+|+.|. .+= +.+||++++ +.+..|.... ++|-+-. -|-.|
T Consensus 90 ~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~--sG~~~- 166 (228)
T 3vzx_A 90 ADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY--SGVLG- 166 (228)
T ss_dssp GGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC--TTSCC-
T ss_pred cchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecC--CCCcC-
Confidence 1 122355788885 432 379999998 7777775543 5554444 33322
Q ss_pred cccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhc
Q 025927 204 SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKV 243 (246)
Q Consensus 204 ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l 243 (246)
+++.+++| |+... +..+.|=|||+. |.++++
T Consensus 167 --~~~~i~~i---~~~~~----~~Pv~vGGGI~t~e~a~~~ 198 (228)
T 3vzx_A 167 --DIEAVKKT---KAVLE----TSTLFYGGGIKDAETAKQY 198 (228)
T ss_dssp --CHHHHHHH---HHHCS----SSEEEEESSCCSHHHHHHH
T ss_pred --CHHHHHHH---HHhcC----CCCEEEeCCCCCHHHHHHH
Confidence 45555444 44321 246999999964 555554
No 135
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=89.32 E-value=5.3 Score=33.80 Aligned_cols=142 Identities=10% Similarity=-0.017 Sum_probs=75.6
Q ss_pred eeeeeccccccCCC-CCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCee-
Q 025927 42 TIVKASARVDKFSK-SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD- 119 (246)
Q Consensus 42 ~~~~~~~~~~~~~~-~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plD- 119 (246)
+.-+|+...++-.+ ++++|+-+.++..-..+.+.++.+.+.|.+.+-+-.-+ + .-..+.++++-+-.++.+.
T Consensus 9 ~~~~~~~~~~~~~~~m~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~--~----~~~~~~~~~~l~~~gl~v~~ 82 (287)
T 3kws_A 9 NTAKGEKGSDKTGKDLELKLSFQEGIAPGESLNEKLDFMEKLGVVGFEPGGGG--L----AGRVNEIKQALNGRNIKVSA 82 (287)
T ss_dssp --------------CCCCEEEEETTSSCCSSHHHHHHHHHHTTCCEEECBSTT--C----GGGHHHHHHHHTTSSCEECE
T ss_pred ccccccccCcccCCcceeeEEEEecccCCCCHHHHHHHHHHcCCCEEEecCCc--h----HHHHHHHHHHHHHcCCeEEE
Confidence 33445555543222 25678888888777789999999999999988776542 2 2223444444333466554
Q ss_pred EEEe------ccCcc----------cchHHHHhcCCCEEEEccCC--------cc-------cccHHHHHHHHHHcCCcE
Q 025927 120 VHLM------IVEPE----------QRVPDFIKAGADIVSVHCEQ--------SS-------TIHLHRTLNQIKDLGAKA 168 (246)
Q Consensus 120 vHLM------V~~P~----------~~i~~~~~agad~It~H~E~--------~~-------~~~~~~~i~~Ik~~G~k~ 168 (246)
+|.- ..+|. +.++...+.|+++|.+|.-. .. .+.+.++....++.|++.
T Consensus 83 ~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l 162 (287)
T 3kws_A 83 ICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSV 162 (287)
T ss_dssp EECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred EecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 3431 12332 23444456799999998521 00 112445566677888876
Q ss_pred EEEEcC---C---CChHHHHHhhhhcc
Q 025927 169 GVVLNP---A---TSLSAIECVLDVVD 189 (246)
Q Consensus 169 GlAlnP---~---Tpve~l~~~l~~vD 189 (246)
++=-.+ . .+.+.+..+++.+|
T Consensus 163 ~lE~~~~~~~~~~~~~~~~~~ll~~v~ 189 (287)
T 3kws_A 163 IFEPLNRKECFYLRQVADAASLCRDIN 189 (287)
T ss_dssp EECCCCTTTCSSCCCHHHHHHHHHHHC
T ss_pred EEEecCcccCcccCCHHHHHHHHHHcC
Confidence 554222 1 23455666666654
No 136
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=89.22 E-value=1.4 Score=37.42 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=65.8
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccC--c----------ccchHHHHhc
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVE--P----------EQRVPDFIKA 137 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~--P----------~~~i~~~~~a 137 (246)
..+.+.++.+.+.|.+.+-+- + +.| .++.++++-+-.++.+..|....+ | .+.++...+.
T Consensus 31 ~~~~~~l~~~~~~G~~~vEl~---~-~~~----~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 102 (301)
T 3cny_A 31 NNLQQLLSDIVVAGFQGTEVG---G-FFP----GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAI 102 (301)
T ss_dssp CCHHHHHHHHHHHTCCEECCC---T-TCC----CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCEEEec---C-CCC----CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHc
Confidence 468889999999999987665 2 223 455555554445777766622111 1 2344445567
Q ss_pred CCCEEEEcc----------C------Cc-c-------cccHHHHHHHHHHcCCcEEEEEcCC---CChHHHHHhhhhcc
Q 025927 138 GADIVSVHC----------E------QS-S-------TIHLHRTLNQIKDLGAKAGVVLNPA---TSLSAIECVLDVVD 189 (246)
Q Consensus 138 gad~It~H~----------E------~~-~-------~~~~~~~i~~Ik~~G~k~GlAlnP~---Tpve~l~~~l~~vD 189 (246)
|+++|.+|. + .. . .+.+.++....++.|+++++=-.+. ...+.+..+++.+|
T Consensus 103 G~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~l~~~~~ 181 (301)
T 3cny_A 103 NAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEETDRLMANTD 181 (301)
T ss_dssp TCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHHHHHHHTSC
T ss_pred CCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccCCHHHHHHHHHhCC
Confidence 999999984 1 00 0 0123455566677888866654443 23455666666554
No 137
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=89.14 E-value=0.57 Score=47.75 Aligned_cols=142 Identities=16% Similarity=0.236 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCC--CH-------HHHhhcccC-CCCC--eeEEEeccCcccchHHHHhcC
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITI--GP-------LVVDALRPV-TDLP--LDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tf--gp-------~~I~~ir~~-t~~p--lDvHLMV~~P~~~i~~~~~ag 138 (246)
.+.++++.|.++||+.|.+|=-.. ...+.. |. ..++.++.. .++| +-+|+-+.....--+.+.+.+
T Consensus 617 A~r~Ei~~L~~AG~r~IQiDEPal--~e~l~~r~g~d~~~~l~~av~a~n~a~~g~p~d~~I~tHiC~Gnf~~~~I~~l~ 694 (789)
T 3ppg_A 617 ALRDEVNDLEGAGITVIQVDEPAI--REGLPLRAGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSDLDPNHIKALD 694 (789)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTT--GGGSCSSSSHHHHHHHHHHHHHHHHHHSSSCTTSEEEEECC---CCHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEEcccch--hhcccccccCCHHHHHHHHHHHHHHHHhcCCCCcEEEEeccCCCCChhHHHhCC
Confidence 466899999999999999995432 211211 11 234445432 2333 224443332221117788899
Q ss_pred CCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCC-CC-h---HHHHH----hhhhcceEEEEeecC--CCCCCcccH
Q 025927 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-TS-L---SAIEC----VLDVVDLVLIMSVNP--GFGGQSFIE 207 (246)
Q Consensus 139 ad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tp-v---e~l~~----~l~~vD~VLvMsV~P--GfgGQ~F~~ 207 (246)
+|.+++-+ +. ..-.+.++.+++.|.++|+-+=+. +| + +.+.. .+..++. --+.++| ||++... +
T Consensus 695 aD~islE~-~~--Rs~~e~L~~~~~~~k~V~lGVvds~sp~vEs~EeV~~rI~~a~~~v~~-erL~lsPdCGl~t~~~-~ 769 (789)
T 3ppg_A 695 ADVVSIEF-SK--KDDPNYIQEFSEYPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPA-SKFWVNPDCGLKTRGW-P 769 (789)
T ss_dssp CSEEEEC------------CGGGGGCCSEEEEC-------CCCCHHHHHHHHHHHTTTSCG-GGEEECCSCC---CCH-H
T ss_pred CCEEEEec-CC--CcchHHHHHHHhcCCeEEeeeecCCCCCCCCHHHHHHHHHHHHHhcCc-ccEEEeCCCCCCCCCH-H
Confidence 99999875 31 111355666676666676644322 21 2 33332 2233321 1144566 7766543 5
Q ss_pred HHHHHHHHHHHH
Q 025927 208 SQVKKISDLRRM 219 (246)
Q Consensus 208 ~~l~KI~~lr~l 219 (246)
.+..|++.+.+-
T Consensus 770 ~a~akL~~mvea 781 (789)
T 3ppg_A 770 EVKESLTNMVEA 781 (789)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 677777776554
No 138
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=89.07 E-value=1.7 Score=38.94 Aligned_cols=78 Identities=18% Similarity=0.268 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHcCC--cEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeE
Q 025927 153 HLHRTLNQIKDLGA--KAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 153 ~~~~~i~~Ik~~G~--k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I 229 (246)
.+...++..|+..- ++++-+. .++.+++.+. -+|+|++=. |.|+.++ ++.+.+...+.+..|
T Consensus 180 ~i~~av~~ar~~~~~~~I~Vev~---t~eea~eal~aGaD~I~LDn---------~~~~~~~---~~v~~l~~~~~~v~i 244 (284)
T 1qpo_A 180 SVVDALRAVRNAAPDLPCEVEVD---SLEQLDAVLPEKPELILLDN---------FAVWQTQ---TAVQRRDSRAPTVML 244 (284)
T ss_dssp SHHHHHHHHHHHCTTSCEEEEES---SHHHHHHHGGGCCSEEEEET---------CCHHHHH---HHHHHHHHHCTTCEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEeC---CHHHHHHHHHcCCCEEEECC---------CCHHHHH---HHHHHhhccCCCeEE
Confidence 34567888887765 6776555 3677777766 489887765 3444444 333444443345789
Q ss_pred EEeCCCChhhhhhccc
Q 025927 230 EVDGGVGPKNAYKVPN 245 (246)
Q Consensus 230 ~VDGGI~~e~i~~l~~ 245 (246)
++=||||++|++++.+
T Consensus 245 eaSGGIt~~~i~~~a~ 260 (284)
T 1qpo_A 245 ESSGGLSLQTAATYAE 260 (284)
T ss_dssp EEESSCCTTTHHHHHH
T ss_pred EEECCCCHHHHHHHHh
Confidence 9999999999998764
No 139
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=89.06 E-value=2.5 Score=37.40 Aligned_cols=99 Identities=13% Similarity=0.206 Sum_probs=62.0
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCC-CCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN-ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIV 142 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN-~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~I 142 (246)
..|.....+..+++.+.|+|.|-+=..-. .++ ..-=.++|+.+++.++.|+-+ =+.+|+. ++.-.++ |+++|
T Consensus 30 ~~~~~~a~~~a~~~v~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~~pisI--DT~~~~v-~~aal~a~~Ga~iI 104 (271)
T 2yci_X 30 NKDPRPIQEWARRQAEKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVDLPCCL--DSTNPDA-IEAGLKVHRGHAMI 104 (271)
T ss_dssp TTCCHHHHHHHHHHHHTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCCCCEEE--ECSCHHH-HHHHHHHCCSCCEE
T ss_pred hCCHHHHHHHHHHHHHCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCCCeEEE--eCCCHHH-HHHHHHhCCCCCEE
Confidence 35677777888888899999987765441 110 111123566667666666432 4446554 4455666 99988
Q ss_pred E-EccCCcccccHHHHHHHHHHcCCcEEEEE
Q 025927 143 S-VHCEQSSTIHLHRTLNQIKDLGAKAGVVL 172 (246)
Q Consensus 143 t-~H~E~~~~~~~~~~i~~Ik~~G~k~GlAl 172 (246)
- +-.+ .+.+.+++..++++|+.+-+.-
T Consensus 105 Ndvs~~---~d~~~~~~~~~a~~~~~vv~m~ 132 (271)
T 2yci_X 105 NSTSAD---QWKMDIFFPMAKKYEAAIIGLT 132 (271)
T ss_dssp EEECSC---HHHHHHHHHHHHHHTCEEEEES
T ss_pred EECCCC---ccccHHHHHHHHHcCCCEEEEe
Confidence 6 7665 2334578888899998554443
No 140
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=88.91 E-value=4.5 Score=35.69 Aligned_cols=140 Identities=13% Similarity=0.060 Sum_probs=84.8
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcc-----cCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEE
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRF-----VPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVS 143 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~F-----VpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It 143 (246)
...-.+-++.|.++|+++|-+ |.| +|.+.=..+.++.+++..+.++-++ +.+ .+-++...++|++.|.
T Consensus 26 ~e~k~~i~~~L~~~Gv~~IE~----g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l--~~~-~~~i~~a~~ag~~~v~ 98 (298)
T 2cw6_A 26 TPVKIKLIDMLSEAGLSVIET----TSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVL--TPN-LKGFEAAVAAGAKEVV 98 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEECC----EECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEE--CCS-HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCcCEEEE----CCCcCcccccccCCHHHHHHHHhhCCCCEEEEE--cCC-HHhHHHHHHCCCCEEE
Confidence 344446678888999887655 344 4544322346667776555555553 334 4568888999999887
Q ss_pred EccCCccc---------------ccHHHHHHHHHHcCCcEEEEEcC--------CCChHHHHHhhhh-----cceEEEEe
Q 025927 144 VHCEQSST---------------IHLHRTLNQIKDLGAKAGVVLNP--------ATSLSAIECVLDV-----VDLVLIMS 195 (246)
Q Consensus 144 ~H~E~~~~---------------~~~~~~i~~Ik~~G~k~GlAlnP--------~Tpve~l~~~l~~-----vD~VLvMs 195 (246)
+=.-. +. +...+.++++|+.|+++-+.+.- .++.+.+.+++.. +|.|-+--
T Consensus 99 i~~~~-sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~D 177 (298)
T 2cw6_A 99 IFGAA-SELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGD 177 (298)
T ss_dssp EEEES-CHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecC
Confidence 74321 11 13456788899999998766542 2567777776643 67665542
Q ss_pred ecCCCCCCcccHHHHHHHHHHHHHH
Q 025927 196 VNPGFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 196 V~PGfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
. .|-..-.++.+.++.+++..
T Consensus 178 T----~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 178 T----IGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp T----TSCCCHHHHHHHHHHHHHHS
T ss_pred C----CCCcCHHHHHHHHHHHHHhC
Confidence 2 23333344556666666655
No 141
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=88.84 E-value=12 Score=32.94 Aligned_cols=115 Identities=14% Similarity=0.234 Sum_probs=71.6
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcc---cchHHHHhcCCCEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE---QRVPDFIKAGADIVS 143 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~---~~i~~~~~agad~It 143 (246)
.+...+.+.++.+.+.|++.+. +..|.-.=+-.| .++++.+++...+ ..+.|- .|.. ++++.+.++|.+.|.
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~--~tGGEPll~~~l-~~li~~~~~~~~~-~~i~i~-TNG~ll~~~~~~L~~~g~~~v~ 124 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIR--ITGGEPLMRRDL-DVLIAKLNQIDGI-EDIGLT-TNGLLLKKHGQKLYDAGLRRIN 124 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEE--EESSCGGGSTTH-HHHHHHHTTCTTC-CEEEEE-ECSTTHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEE--EeCCCccchhhH-HHHHHHHHhCCCC-CeEEEE-eCccchHHHHHHHHHCCCCEEE
Confidence 3556777888888888888655 466753212122 4667777665322 266654 3443 467788889999999
Q ss_pred EccCCcc-------------cccHHHHHHHHHHcCCcE--EEEEcCCCChHHHHHhhh
Q 025927 144 VHCEQSS-------------TIHLHRTLNQIKDLGAKA--GVVLNPATSLSAIECVLD 186 (246)
Q Consensus 144 ~H~E~~~-------------~~~~~~~i~~Ik~~G~k~--GlAlnP~Tpve~l~~~l~ 186 (246)
+-+++.. .+...+.|+.+++.|+.+ ..++.|+...+.+.++++
T Consensus 125 iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~~g~n~~ei~~~~~ 182 (340)
T 1tv8_A 125 VSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLE 182 (340)
T ss_dssp EECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEECTTTTGGGHHHHHH
T ss_pred EecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEEeCCCCHHHHHHHHH
Confidence 9888631 112345566677888754 456777766666665543
No 142
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=88.68 E-value=1.3 Score=39.28 Aligned_cols=78 Identities=10% Similarity=0.088 Sum_probs=46.1
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEE--eccCcccchHHHHhcCCCEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHL--MIVEPEQRVPDFIKAGADIVS 143 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHL--MV~~P~~~i~~~~~agad~It 143 (246)
.|+..+.+-++++.+.|+|+|-+==+=|.-.|+..+ +.+++|++.. +.|+.+|. =.--+..-.-.-+++|++.|-
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~--~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd 233 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATR--RLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFD 233 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHH--HHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHH--HHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE
Confidence 466777777777778888876655333444443222 3556666655 56788887 333333333344667887766
Q ss_pred Ecc
Q 025927 144 VHC 146 (246)
Q Consensus 144 ~H~ 146 (246)
.=+
T Consensus 234 ~tv 236 (302)
T 2ftp_A 234 SSV 236 (302)
T ss_dssp EBG
T ss_pred ecc
Confidence 544
No 143
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=88.26 E-value=8.1 Score=34.62 Aligned_cols=150 Identities=15% Similarity=0.170 Sum_probs=83.8
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCH----HHHhhcccCCCCCeeEEEeccC--cccchHHHHhcCCC
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPVTDLPLDVHLMIVE--PEQRVPDFIKAGAD 140 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp----~~I~~ir~~t~~plDvHLMV~~--P~~~i~~~~~agad 140 (246)
.+...+.++++.+.+.|++.+++ ..|.--|.. ... ++++.+++. ++ .+++ ... ....++.|.++|++
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~--~gg~~~p~~-~~~~~l~~ll~~ik~~-g~--~i~~-t~G~l~~e~l~~L~~aGvd 171 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCM--GAAWKNPHE-RDMPYLEQMVQGVKAM-GL--EACM-TLGTLSESQAQRLANAGLD 171 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE--EECCSSCCT-TTHHHHHHHHHHHHHT-TS--EEEE-ECSSCCHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEE--EeCCCCCCc-CCHHHHHHHHHHHHHc-CC--eEEE-ecCCCCHHHHHHHHHCCCC
Confidence 45667777888888889998875 333211221 333 344455543 33 4442 111 23467889999999
Q ss_pred EEEEccCCc-----------ccccHHHHHHHHHHcCCcEEE--EEcCCCChHHHHHhhh---h----cceEEEEeec--C
Q 025927 141 IVSVHCEQS-----------STIHLHRTLNQIKDLGAKAGV--VLNPATSLSAIECVLD---V----VDLVLIMSVN--P 198 (246)
Q Consensus 141 ~It~H~E~~-----------~~~~~~~~i~~Ik~~G~k~Gl--AlnP~Tpve~l~~~l~---~----vD~VLvMsV~--P 198 (246)
.+.+-+|+. +.++..+.++.+++.|+++++ .+..+...+++...+. . +|.|-+.... |
T Consensus 172 ~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~ 251 (369)
T 1r30_A 172 YYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVK 251 (369)
T ss_dssp EEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCT
T ss_pred EEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeeeeecC
Confidence 999888852 012355677788888887654 4444455555554433 2 4565554444 4
Q ss_pred CC--CCCc-c-cHHHHHHHHHHHHHHHhc
Q 025927 199 GF--GGQS-F-IESQVKKISDLRRMCLEK 223 (246)
Q Consensus 199 Gf--gGQ~-F-~~~~l~KI~~lr~l~~~~ 223 (246)
|. ...+ . ..+.++-++.+|.+++..
T Consensus 252 gT~l~~~~~~~~~~~~~~~~~~r~~l~~~ 280 (369)
T 1r30_A 252 GTPLADNDDVDAFDFIRTIAVARIMMPTS 280 (369)
T ss_dssp TSTTSSCCCCCHHHHHHHHHHHHHHCTTS
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHHhCCCC
Confidence 42 2222 1 234445555667766553
No 144
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=88.24 E-value=0.61 Score=41.66 Aligned_cols=132 Identities=16% Similarity=0.250 Sum_probs=87.7
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeec--------c---CcccCCCCCCHHHHhhcccCCCCCeeEEEec-
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVM--------D---GRFVPNITIGPLVVDALRPVTDLPLDVHLMI- 124 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIM--------D---G~FVpN~tfgp~~I~~ir~~t~~plDvHLMV- 124 (246)
...+...|+..|...+.+..+.++++ +|.+=+-.- | |.+..+..|-.++++++++.+++|+-+=+=.
T Consensus 58 ~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 58 ERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp CTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC
Confidence 45677888877888888889998888 887544321 1 1122233444567888888777887776532
Q ss_pred ---cCcccchHHHHhcCCCEEEEccCCc-----ccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh--cceEEE
Q 025927 125 ---VEPEQRVPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV--VDLVLI 193 (246)
Q Consensus 125 ---~~P~~~i~~~~~agad~It~H~E~~-----~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~--vD~VLv 193 (246)
.++..+++.+.++|+|.|++|.-.. ...++ ..+..+++ ++=|..|-+ ++.++++.++.. +|.|.+
T Consensus 137 ~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~-~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~i 212 (318)
T 1vhn_A 137 WEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEW-KALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLV 212 (318)
T ss_dssp SSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCG-GGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEE
T ss_pred CChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCH-HHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEE
Confidence 2333678888999999999994321 01122 45666666 344566666 678888888874 898876
No 145
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=88.14 E-value=0.37 Score=42.60 Aligned_cols=161 Identities=10% Similarity=0.016 Sum_probs=98.8
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCC---EEEeeeccCcccCCC----CCC------HHHHhhcccCCCCCeeEEEe
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCD---WIHVDVMDGRFVPNI----TIG------PLVVDALRPVTDLPLDVHLM 123 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d---~lHiDIMDG~FVpN~----tfg------p~~I~~ir~~t~~plDvHLM 123 (246)
+..+.+++...+...+.+.++.++++|+| .+++.+. .||. .|| .++++++|+.+++|+-+=+-
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~----~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~ 168 (314)
T 2e6f_A 93 KKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLS----CPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMP 168 (314)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC----CCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcC----CCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 45677888888889999999999999999 9999874 3433 222 35788888877788776553
Q ss_pred cc-Ccc---cchHHHHhcC-CCEEEEccCC----------c-------------cc----ccHHHHHHHHHHcCCcEEEE
Q 025927 124 IV-EPE---QRVPDFIKAG-ADIVSVHCEQ----------S-------------ST----IHLHRTLNQIKDLGAKAGVV 171 (246)
Q Consensus 124 V~-~P~---~~i~~~~~ag-ad~It~H~E~----------~-------------~~----~~~~~~i~~Ik~~G~k~GlA 171 (246)
.. +++ ++.+.+.++| +|.|++|--. . +. ....+.+..+|+.--++=|.
T Consensus 169 ~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi 248 (314)
T 2e6f_A 169 PYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVF 248 (314)
T ss_dssp CCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEE
Confidence 22 112 2355667889 9999877311 0 00 01146777777652134455
Q ss_pred EcCC-CChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHH-HHHHHHHhcCCC
Q 025927 172 LNPA-TSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKIS-DLRRMCLEKGVN 226 (246)
Q Consensus 172 lnP~-Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~-~lr~l~~~~~~~ 226 (246)
.+-+ ++.++..+++. -+|.|.+=+-- .. -.|..++|++ .++++..+.|+.
T Consensus 249 ~~GGI~~~~da~~~l~~GAd~V~ig~~~--l~---~~p~~~~~i~~~l~~~~~~~g~~ 301 (314)
T 2e6f_A 249 GCGGVYSGEDAFLHILAGASMVQVGTAL--QE---EGPGIFTRLEDELLEIMARKGYR 301 (314)
T ss_dssp EESSCCSHHHHHHHHHHTCSSEEECHHH--HH---HCTTHHHHHHHHHHHHHHHHTCC
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEchhh--Hh---cCcHHHHHHHHHHHHHHHHcCCC
Confidence 5545 45666666554 48988773320 00 0234556654 456667776653
No 146
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=88.07 E-value=4.7 Score=33.76 Aligned_cols=139 Identities=14% Similarity=0.079 Sum_probs=78.9
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCC-CeeEEEec-----cCcc-
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDL-PLDVHLMI-----VEPE- 128 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~-plDvHLMV-----~~P~- 128 (246)
+|..+..+..-..+.+.++.+.+.|.|.+-+=..+.+.-....+.+..++++++ ..++ .+-+|.-. .+|.
T Consensus 3 klg~~~~~~~~~~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~ 82 (270)
T 3aam_A 3 RYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGEL 82 (270)
T ss_dssp EEEEBCCCCSTTHHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTH
T ss_pred eeeeccccCCCccHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHH
Confidence 466666555444688999999999999988721111111223455666666644 3566 77788521 1343
Q ss_pred ---------cchHHHHhcCCCEEEEccCCcc----cccHHHHHHHHH-HcCCcEEEEEcCC------CChHHHHHhhhhc
Q 025927 129 ---------QRVPDFIKAGADIVSVHCEQSS----TIHLHRTLNQIK-DLGAKAGVVLNPA------TSLSAIECVLDVV 188 (246)
Q Consensus 129 ---------~~i~~~~~agad~It~H~E~~~----~~~~~~~i~~Ik-~~G~k~GlAlnP~------Tpve~l~~~l~~v 188 (246)
+.++...+.|+..+.+|.=... .+.+.++.+..+ +.|++.++=-.|+ .+++.+..+++.+
T Consensus 83 r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 162 (270)
T 3aam_A 83 WEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVADT 162 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHHHHHhC
Confidence 2334445579999999965310 112334444444 4566655543321 2567777777777
Q ss_pred ceEEEEeecCC
Q 025927 189 DLVLIMSVNPG 199 (246)
Q Consensus 189 D~VLvMsV~PG 199 (246)
. +=++.++|
T Consensus 163 -~-vg~~lD~~ 171 (270)
T 3aam_A 163 -P-LQVCLDTC 171 (270)
T ss_dssp -S-CEEEEEHH
T ss_pred -C-EEEEEehh
Confidence 2 33455555
No 147
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=87.98 E-value=2 Score=39.00 Aligned_cols=71 Identities=14% Similarity=0.218 Sum_probs=47.6
Q ss_pred cChhhHHHHHHHH-----HHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCE
Q 025927 67 ANFAKLGEQVKAV-----ELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 141 (246)
Q Consensus 67 aD~~~l~~~i~~l-----~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~ 141 (246)
.|...+.+.++.+ .+.|.+++++| ||=|... |.-.+ | + .-+|.+|
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~v~iD--dgW~~~~-----------rd~~G---~--~-~~~~~~F----------- 72 (362)
T 1uas_A 23 INEQIIRETADALVNTGLAKLGYQYVNID--DCWAEYS-----------RDSQG---N--F-VPNRQTF----------- 72 (362)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECC--SSCBCSS-----------CCTTS---C--C-CBCTTTC-----------
T ss_pred CCHHHHHHHHHHHHHcCchhcCCcEEEEC--CCcCCCC-----------CCCCC---C--e-eEChhcc-----------
Confidence 5777888889888 78899999986 5655321 11000 0 0 1122222
Q ss_pred EEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCC
Q 025927 142 VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT 176 (246)
Q Consensus 142 It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T 176 (246)
...+..+.+++|+.|+|+||-.+|++
T Consensus 73 ---------P~Gl~~l~~~ih~~Glk~Giw~~~~~ 98 (362)
T 1uas_A 73 ---------PSGIKALADYVHAKGLKLGIYSDAGS 98 (362)
T ss_dssp ---------TTCHHHHHHHHHHTTCEEEEEEESSS
T ss_pred ---------CccHHHHHHHHHHCCCEeEEEeeCCC
Confidence 11377899999999999999999985
No 148
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=87.95 E-value=4 Score=35.16 Aligned_cols=127 Identities=9% Similarity=0.150 Sum_probs=77.1
Q ss_pred CcEEeeeecc-cChhhHHHHHHHHHHcCCCEEEe--eeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEecc-------
Q 025927 57 DIIVSPSILS-ANFAKLGEQVKAVELAGCDWIHV--DVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIV------- 125 (246)
Q Consensus 57 ~~~IsPSIl~-aD~~~l~~~i~~l~~~g~d~lHi--DIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~------- 125 (246)
..+|+.+|.. -+...+.++++.+.+.|+|.+=+ |..+. + +...=.+.++.||+.+ ++|+-+++=..
T Consensus 3 ~p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~-~--~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~ 79 (238)
T 1sfl_A 3 HVEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFEN-V--TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQ 79 (238)
T ss_dssp CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTT-C--CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBC
T ss_pred CCeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEeccccc-C--CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCC
Confidence 5689999999 99999999999888889998765 43331 1 1111123345678876 68988877533
Q ss_pred -CcccchHHH---Hhc-CCCEEEEccCCc-ccccHHHHHHHHHHcCCcEEEEEcC--CCCh-HHHHHhhh
Q 025927 126 -EPEQRVPDF---IKA-GADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNP--ATSL-SAIECVLD 186 (246)
Q Consensus 126 -~P~~~i~~~---~~a-gad~It~H~E~~-~~~~~~~~i~~Ik~~G~k~GlAlnP--~Tpv-e~l~~~l~ 186 (246)
.++.|++.+ .+. ++|+|-+-+... ......++++..++.|.|+=+...- .||- +.+...+.
T Consensus 80 ~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~ 149 (238)
T 1sfl_A 80 FTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFF 149 (238)
T ss_dssp CCHHHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHH
Confidence 234565555 444 699999877631 1223567778888889988777652 4663 45555444
No 149
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=87.87 E-value=1.2 Score=42.40 Aligned_cols=98 Identities=15% Similarity=0.053 Sum_probs=59.4
Q ss_pred CcccchHHHHhcCCCEEEE---ccCCc-----------c-----ccc-HHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh
Q 025927 126 EPEQRVPDFIKAGADIVSV---HCEQS-----------S-----TIH-LHRTLNQIKDLGAKAGVVLNPATSLSAIECVL 185 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~---H~E~~-----------~-----~~~-~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l 185 (246)
||+.|++.+.++|++++.+ |-+.+ + ..| +.++.+.+|+.|+|+|+-++..-+. ..+-.
T Consensus 106 Dp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~GlY~S~~~dW--~~p~~ 183 (455)
T 2zxd_A 106 DPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDW--RFTTE 183 (455)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEEEEEECSCCG--GGCCS
T ss_pred CHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeEEEEecCCccc--cCccc
Confidence 7899999999999998765 43322 0 123 5678889999999999998832232 11100
Q ss_pred hhcceEEEEeecCCCCC----CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC
Q 025927 186 DVVDLVLIMSVNPGFGG----QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV 235 (246)
Q Consensus 186 ~~vD~VLvMsV~PGfgG----Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI 235 (246)
...|. ..+|++ +.|....+. ++++++..-+.+ .|..||+-
T Consensus 184 ~~~~~------~~~y~~~~~~~~y~~~~~~---Ql~ELlt~Y~pd-~lWfDg~~ 227 (455)
T 2zxd_A 184 PIRYP------EDLSYIRPNTYEYADYAYK---QVMELVDLYLPD-VLWNDMGW 227 (455)
T ss_dssp CCCSG------GGGGTCSCCSHHHHHHHHH---HHHHHHHHHCCS-EEEEESCC
T ss_pred ccccc------cccccCCCccHHHHHHHHH---HHHHHHhhcCCc-EEEECCCC
Confidence 00010 122332 335555554 555666555654 68999975
No 150
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=87.68 E-value=0.51 Score=43.45 Aligned_cols=135 Identities=24% Similarity=0.271 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHH-----HhhcccC-CCCCeeE--EEeccC----------------
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLV-----VDALRPV-TDLPLDV--HLMIVE---------------- 126 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~-----I~~ir~~-t~~plDv--HLMV~~---------------- 126 (246)
.+.++++.|.++|+++|.+|= |.++..++. ++.++.. .+++.++ |+.=.+
T Consensus 172 a~~~ei~~l~~aG~~~IQiDe------P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~~ 245 (357)
T 3rpd_A 172 ILNEEAKELEAAGVDIIQFDE------PAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEW 245 (357)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC------GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSCC
T ss_pred HHHHHHHHHHHcCCCEEEecC------ccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCcccccccccccc
Confidence 456889999999999999995 444434433 3444432 3455555 766321
Q ss_pred --cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCC-C----ChHHHHH----hhhhc--ceEEE
Q 025927 127 --PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-T----SLSAIEC----VLDVV--DLVLI 193 (246)
Q Consensus 127 --P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-T----pve~l~~----~l~~v--D~VLv 193 (246)
=...++.+.+.++|.+++-+-. .....++++.++ |.++|+-+=+. + +.+.+.. .++.+ |.
T Consensus 246 g~y~~i~~~l~~~~~D~i~lE~~~--~r~~~e~l~~~~--~k~v~lGvvd~~s~~ve~~eev~~ri~~a~~~v~~~~--- 318 (357)
T 3rpd_A 246 RQYEEVFPKLQKSNIDIISLECHN--SHVPMELLELIR--GKKVMVGAIDVATDTIETAEEVADTLRKALKFVDADK--- 318 (357)
T ss_dssp CGGGGTHHHHHHSSCCEEEECCTT--CCCCGGGGGGGT--TSEEEEECSCTTCSSCCCHHHHHHHHHHHHTTSCGGG---
T ss_pred CcHHHHHHHHHhCCCCEEEEEecC--CCCChHHHHhcC--CCEEEeccccCcCCCCCCHHHHHHHHHHHHHhCCccc---
Confidence 1456788888999999886543 111123455554 45666654222 1 2233333 23332 33
Q ss_pred EeecC--CCCCCcccHHHHHHHHHHHHH
Q 025927 194 MSVNP--GFGGQSFIESQVKKISDLRRM 219 (246)
Q Consensus 194 MsV~P--GfgGQ~F~~~~l~KI~~lr~l 219 (246)
+.+.| |++.-+ .+.+.+|++.+.+.
T Consensus 319 l~lsPdCGl~~~~-~~~a~~kL~~mv~a 345 (357)
T 3rpd_A 319 LYPCTNCGMTPLS-HQVTRGKLNALSAG 345 (357)
T ss_dssp EEEECSSCCTTSC-HHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCC-HHHHHHHHHHHHHH
Confidence 23456 555432 23556777666544
No 151
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=87.48 E-value=1.9 Score=35.27 Aligned_cols=65 Identities=14% Similarity=0.294 Sum_probs=44.4
Q ss_pred ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc---CCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCC
Q 025927 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG 201 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~---G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfg 201 (246)
.++++.+.+.|++.|.+|.+. .+..+.++.+|+. +..+|+.. -...+.++..+. -+|+| |.|||.
T Consensus 25 ~~~~~~~~~~G~~~iev~~~~---~~~~~~i~~ir~~~~~~~~ig~~~--v~~~~~~~~a~~~Gad~i----v~~~~~ 93 (205)
T 1wa3_A 25 KEKALAVFEGGVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGT--VTSVEQCRKAVESGAEFI----VSPHLD 93 (205)
T ss_dssp HHHHHHHHHTTCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEES--CCSHHHHHHHHHHTCSEE----ECSSCC
T ss_pred HHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHHCCCCcEEEecc--cCCHHHHHHHHHcCCCEE----EcCCCC
Confidence 456778888999999999984 4566778888876 46667531 123445555443 59998 567764
No 152
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=87.29 E-value=12 Score=33.42 Aligned_cols=124 Identities=15% Similarity=0.063 Sum_probs=74.2
Q ss_pred CCCCeeEEEe-ccCcccchHHHHhcCCCEEEEccCCcc-------cc---cHHHHHHHHHHc-CCcEEEEE-cCCCChHH
Q 025927 114 TDLPLDVHLM-IVEPEQRVPDFIKAGADIVSVHCEQSS-------TI---HLHRTLNQIKDL-GAKAGVVL-NPATSLSA 180 (246)
Q Consensus 114 t~~plDvHLM-V~~P~~~i~~~~~agad~It~H~E~~~-------~~---~~~~~i~~Ik~~-G~k~GlAl-nP~Tpve~ 180 (246)
.+.|+-+.+. -.+|+.+.+.+..+|+|.|.+|..... .. .+.+.++++|+. ++.+.+-+ .+....+.
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~ 194 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKAS 194 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHH
T ss_pred CCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHH
Confidence 4678888887 356666665566789999999986310 01 155788888865 66666655 45567777
Q ss_pred HHHhhhh-cceEEEEeecCCC--------CC-------CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhh
Q 025927 181 IECVLDV-VDLVLIMSVNPGF--------GG-------QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYK 242 (246)
Q Consensus 181 l~~~l~~-vD~VLvMsV~PGf--------gG-------Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~ 242 (246)
.....+. +|.|.+-.- .|- .. ...-+...+.|+++++.. .+..|.++|||+ .+.+.+
T Consensus 195 a~~a~~~Gad~I~v~~~-ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~----~~ipvia~GGI~~~~d~~k 268 (349)
T 1p0k_A 195 AGKLYEAGAAAVDIGGY-GGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF----PASTMIASGGLQDALDVAK 268 (349)
T ss_dssp HHHHHHHTCSEEEEEC----------------CCGGGGTTCSCCHHHHHHHHHHHC----TTSEEEEESSCCSHHHHHH
T ss_pred HHHHHHcCCCEEEEcCC-CCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc----CCCeEEEECCCCCHHHHHH
Confidence 7766554 999888521 110 00 011123444555555432 146799999997 455544
No 153
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=87.28 E-value=1.8 Score=39.32 Aligned_cols=87 Identities=21% Similarity=0.241 Sum_probs=56.5
Q ss_pred CcEEeeeec---ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCC-----CCCCHHHHhhcccCCCCCeeEEEeccCcc
Q 025927 57 DIIVSPSIL---SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN-----ITIGPLVVDALRPVTDLPLDVHLMIVEPE 128 (246)
Q Consensus 57 ~~~IsPSIl---~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN-----~tfgp~~I~~ir~~t~~plDvHLMV~~P~ 128 (246)
-++|+|.=+ ..+.....+-++.|+++|+|+||+- +|.+.+. -.+..++++.+|+..++|+-+==-+.+|+
T Consensus 213 ~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs--~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e 290 (340)
T 3gr7_A 213 FVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVS--SGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGW 290 (340)
T ss_dssp EEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHH
T ss_pred EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe--cCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHH
Confidence 357777522 1245566777889999999999984 3444331 12345678889887778854433344666
Q ss_pred cchHHHHhcC-CCEEEEcc
Q 025927 129 QRVPDFIKAG-ADIVSVHC 146 (246)
Q Consensus 129 ~~i~~~~~ag-ad~It~H~ 146 (246)
. .+++.+.| +|.|.+=-
T Consensus 291 ~-a~~~L~~G~aD~V~iGR 308 (340)
T 3gr7_A 291 Q-AEEILQNGRADLVFLGR 308 (340)
T ss_dssp H-HHHHHHTTSCSEEEECH
T ss_pred H-HHHHHHCCCeeEEEecH
Confidence 5 44566677 99999853
No 154
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=87.23 E-value=9.1 Score=31.70 Aligned_cols=104 Identities=12% Similarity=0.077 Sum_probs=64.6
Q ss_pred CcccchHHHHhcCCCEEEEccCCc-----ccccHHHHHHHHHHcCCcE-EEEE--cCCCC----hHHHHHhhhh-----c
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDLGAKA-GVVL--NPATS----LSAIECVLDV-----V 188 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~~-----~~~~~~~~i~~Ik~~G~k~-GlAl--nP~Tp----ve~l~~~l~~-----v 188 (246)
.++..++...++|.+.|-+..+.. ....+.++.+.+++.|+++ ++.. ..+.+ .+.++..++. +
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 99 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGA 99 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCC
Confidence 355677788888999888874321 1245777888889999988 5543 22222 2334444432 4
Q ss_pred ceEEEEeecCCCCCCcccHHH-HHHHHHHHHHHHhcCCCCeEEEe
Q 025927 189 DLVLIMSVNPGFGGQSFIESQ-VKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 189 D~VLvMsV~PGfgGQ~F~~~~-l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
+.|.+ .||+.+..-.... .+.++++-++.++.|..+-+|-.
T Consensus 100 ~~v~~---~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 141 (272)
T 2q02_A 100 RALVL---CPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPL 141 (272)
T ss_dssp SEEEE---CCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred CEEEE---ccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 44443 5777654445566 77788888887777766556554
No 155
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=87.20 E-value=1 Score=37.62 Aligned_cols=124 Identities=18% Similarity=0.190 Sum_probs=73.5
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHH-HHhhcccCC-CCCeeEEEecc-------Ccc---------
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL-VVDALRPVT-DLPLDVHLMIV-------EPE--------- 128 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~-~I~~ir~~t-~~plDvHLMV~-------~P~--------- 128 (246)
+....+.+.++.+.+.|.+ +-+ ..++ +. +.+. .++++++.. + .+-+|.-.. +|.
T Consensus 7 ~p~~~l~~~l~~~~~~G~~-vEl-~~~~---~~--~~~~~~~~~~~~~~~~-~~~~h~~~~~~~l~~~~~~~r~~~~~~~ 78 (254)
T 3ayv_A 7 FPLSRAEEALPRLQALGLG-AEV-YLDP---AL--LEEDALFQSLRRRFSG-KLSVHLPFWNLDLLSPDPEVRGLTLRRL 78 (254)
T ss_dssp EEGGGHHHHHHHHHHHTCE-EEE-ECCG---GG--TTCHHHHHHHHHHCCS-CEEEECCCTTCCTTCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-EEE-eccc---cc--cCcHHHHHHHHHHhCC-CeEEecCccCCCCCCCCHHHHHHHHHHH
Confidence 4456788999999999999 755 2232 11 2222 455565543 5 677775321 231
Q ss_pred -cchHHHHhcCCCEEEEccCCccc--------------ccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcc-eEE
Q 025927 129 -QRVPDFIKAGADIVSVHCEQSST--------------IHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVD-LVL 192 (246)
Q Consensus 129 -~~i~~~~~agad~It~H~E~~~~--------------~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD-~VL 192 (246)
+.++...+.|+++|.+|.-.... +.+.++....++.|++.++=-.+.+..+.+..+++.+| .|
T Consensus 79 ~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~l~~~v~~~v- 157 (254)
T 3ayv_A 79 LFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLENSHEPHPEALRPVLEAHAGEL- 157 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSCSSGGGTHHHHHHHTTSS-
T ss_pred HHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCCCCHHHHHHHHHhcCcCE-
Confidence 23444456799999999532110 11234555566788887776555567778888888876 32
Q ss_pred EEeecCC
Q 025927 193 IMSVNPG 199 (246)
Q Consensus 193 vMsV~PG 199 (246)
-+..++|
T Consensus 158 g~~~D~~ 164 (254)
T 3ayv_A 158 GFCFDAA 164 (254)
T ss_dssp EEEEEHH
T ss_pred EEEEEch
Confidence 2344554
No 156
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=86.97 E-value=2.2 Score=37.55 Aligned_cols=93 Identities=16% Similarity=0.151 Sum_probs=53.8
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccC-cccCCCCCCHHH----HhhcccCCCCCeeEEEeccCcccchHHHHhc--CC
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDG-RFVPNITIGPLV----VDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GA 139 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG-~FVpN~tfgp~~----I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--ga 139 (246)
.|+....+..+++.+.|+|+|-+=. | ..++ .++. +..++..++.|+- +=+.+|+.. +.-.++ |+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~--g~~~v~----~~ee~~rvv~~i~~~~~~pis--IDT~~~~v~-~aAl~a~~Ga 92 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNV--GPAVQD----KVSAMEWLVEVTQEVSNLTLC--LDSTNIKAI-EAGLKKCKNR 92 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBC--C----C----HHHHHHHHHHHHHTTCCSEEE--EECSCHHHH-HHHHHHCSSC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECC--CCCCCC----hHHHHHHHHHHHHHhCCCeEE--EeCCCHHHH-HHHHhhCCCC
Confidence 4667777788888899999987765 2 1121 2233 3333443444432 234455543 344555 99
Q ss_pred CEEE-EccCCcccccHHHHHHHHHHcCCcEEEE
Q 025927 140 DIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVV 171 (246)
Q Consensus 140 d~It-~H~E~~~~~~~~~~i~~Ik~~G~k~GlA 171 (246)
++|- +-.+ .+...+++..+++.|+.+-+.
T Consensus 93 ~iINdvs~~---~d~~~~~~~~~a~~~~~vvlm 122 (262)
T 1f6y_A 93 AMINSTNAE---REKVEKLFPLAVEHGAALIGL 122 (262)
T ss_dssp EEEEEECSC---HHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEECCCC---cccHHHHHHHHHHhCCcEEEE
Confidence 9885 6544 233447888889999754443
No 157
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.94 E-value=2.6 Score=43.43 Aligned_cols=131 Identities=13% Similarity=0.128 Sum_probs=81.1
Q ss_pred hhcccCC-CCCeeEEEec-cCcccchHH---HHhcCCCEEEEccCCcc--------------cccHHHHHHHHHHc-CCc
Q 025927 108 DALRPVT-DLPLDVHLMI-VEPEQRVPD---FIKAGADIVSVHCEQSS--------------TIHLHRTLNQIKDL-GAK 167 (246)
Q Consensus 108 ~~ir~~t-~~plDvHLMV-~~P~~~i~~---~~~agad~It~H~E~~~--------------~~~~~~~i~~Ik~~-G~k 167 (246)
+.+++.+ +.|+-+-+|. .+++.|.+. +.++|+|.|.+|.-.-. ...+.++++.+|+. ++.
T Consensus 626 ~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~P 705 (1025)
T 1gte_A 626 TELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705 (1025)
T ss_dssp HHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCc
Confidence 4445433 6788888876 467776654 34579999999974210 11246788888876 778
Q ss_pred EEEEEcCCCC-hHHHHHhhh--hcceEEEE-------ee-----------------cCCCCCCcccHHHHHHHHHHHHHH
Q 025927 168 AGVVLNPATS-LSAIECVLD--VVDLVLIM-------SV-----------------NPGFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 168 ~GlAlnP~Tp-ve~l~~~l~--~vD~VLvM-------sV-----------------~PGfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
+.+=+.|+.. +..+...+. -+|.|.+- .+ ..|+.|....|..++-|+++++..
T Consensus 706 v~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~ 785 (1025)
T 1gte_A 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL 785 (1025)
T ss_dssp EEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS
T ss_pred eEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc
Confidence 8888887643 333333332 28998882 11 123446666666667777776654
Q ss_pred HhcCCCCeEEEeCCCC-hhhhhh
Q 025927 221 LEKGVNPWIEVDGGVG-PKNAYK 242 (246)
Q Consensus 221 ~~~~~~~~I~VDGGI~-~e~i~~ 242 (246)
+ ++.|...|||+ .+.+.+
T Consensus 786 ~----~ipvi~~GGI~s~~da~~ 804 (1025)
T 1gte_A 786 P----GFPILATGGIDSAESGLQ 804 (1025)
T ss_dssp T----TCCEEEESSCCSHHHHHH
T ss_pred C----CCCEEEecCcCCHHHHHH
Confidence 1 35688999994 455444
No 158
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=86.58 E-value=0.83 Score=39.79 Aligned_cols=74 Identities=18% Similarity=0.289 Sum_probs=57.0
Q ss_pred EEEeccCccc-----chHHHHhcCCCEEEEccCC-cccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEE
Q 025927 120 VHLMIVEPEQ-----RVPDFIKAGADIVSVHCEQ-SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 120 vHLMV~~P~~-----~i~~~~~agad~It~H~E~-~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLv 193 (246)
-|+..-+|++ .++.+.+.|+|.|-+=-.. .+.++..++++.+|+ ...=+.|-|..+ + .+.+.+|.+++
T Consensus 8 ~h~~~iDPdk~~~~~~~~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~--~~~Pvvlfp~~~-~---~v~~gaD~~l~ 81 (228)
T 3vzx_A 8 KHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR--FLVPCVLEVSAI-E---AIVPGFDLYFI 81 (228)
T ss_dssp CEEEEECTTSCCCTTHHHHHHTSSCSEEEECCCSCCCHHHHHHHHHHHTT--SSSCEEEECSCG-G---GCCSCCSEEEE
T ss_pred eEEEeECCCCCCCHHHHHHHHHcCCCEEEECCcCCCCHHHHHHHHHHhhc--cCCCEEEeCCCH-H---HccccCCEEEE
Confidence 3777778876 5677788999999887654 224567888899987 677788888885 3 45689999999
Q ss_pred EeecCC
Q 025927 194 MSVNPG 199 (246)
Q Consensus 194 MsV~PG 199 (246)
|++-.+
T Consensus 82 pslln~ 87 (228)
T 3vzx_A 82 PSVLNS 87 (228)
T ss_dssp EEETTB
T ss_pred eeecCC
Confidence 999776
No 159
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=86.33 E-value=6 Score=35.77 Aligned_cols=121 Identities=19% Similarity=0.199 Sum_probs=75.6
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCccc-----CCC-----C----------CCHHHHhhcccCC--CCCeeEEEecc----
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFV-----PNI-----T----------IGPLVVDALRPVT--DLPLDVHLMIV---- 125 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN~-----t----------fgp~~I~~ir~~t--~~plDvHLMV~---- 125 (246)
+.+..+++.++|.|.+-+..--|... |+. . |--++++++|+.. ++|+-+=|=..
T Consensus 154 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~ 233 (349)
T 3hgj_A 154 FVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGE 233 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCST
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 33455667789999988877665332 321 2 3367889998865 56776666432
Q ss_pred ------CcccchHHHHhcCCCEEEEccCCc--------ccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh--c
Q 025927 126 ------EPEQRVPDFIKAGADIVSVHCEQS--------STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV--V 188 (246)
Q Consensus 126 ------~P~~~i~~~~~agad~It~H~E~~--------~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~--v 188 (246)
+...+++.+.++|+|+|.+|.-.. ....-..+++.+|+.- ++=|..+-+ +..+..+.+|.. +
T Consensus 234 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 234 GGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSA 312 (349)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCc
Confidence 234556777889999999994100 0111235677787652 222344433 577888888865 8
Q ss_pred ceEEE
Q 025927 189 DLVLI 193 (246)
Q Consensus 189 D~VLv 193 (246)
|+|.+
T Consensus 313 D~V~i 317 (349)
T 3hgj_A 313 DLVLL 317 (349)
T ss_dssp SEEEE
T ss_pred eEEEe
Confidence 88765
No 160
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=86.29 E-value=15 Score=32.63 Aligned_cols=142 Identities=10% Similarity=0.118 Sum_probs=83.3
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCccc-----CCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEE
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFV-----PNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~I 142 (246)
....-.+-++.|.++|+++|=+ |.|+ |.+.=..+.++.+++..+..+-+ ++.| .+-++...++|++.|
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~----g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~--l~~~-~~~i~~a~~~g~~~v 98 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEI----TSFVHPKWIPALRDAIDVAKGIDREKGVTYAA--LVPN-QRGLENALEGGINEA 98 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEE----EECSCTTTCGGGTTHHHHHHHSCCCTTCEEEE--ECCS-HHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE----CCCcCcccccccCCHHHHHHHhhhcCCCeEEE--EeCC-HHhHHHHHhCCcCEE
Confidence 3444556678889999997766 5554 43432234556666554444443 3444 346888899999987
Q ss_pred EEccCCcc--------------cccHHHHHHHHHHcCCcEEEEEcCC--------CChHHHHHhhhh-----cceEEEEe
Q 025927 143 SVHCEQSS--------------TIHLHRTLNQIKDLGAKAGVVLNPA--------TSLSAIECVLDV-----VDLVLIMS 195 (246)
Q Consensus 143 t~H~E~~~--------------~~~~~~~i~~Ik~~G~k~GlAlnP~--------Tpve~l~~~l~~-----vD~VLvMs 195 (246)
.+-.-+.. .+...+.++++|+.|.++-..+.-. ++.+.+.+++.. +|.|-+--
T Consensus 99 ~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~D 178 (307)
T 1ydo_A 99 CVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGD 178 (307)
T ss_dssp EEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEEC
T ss_pred EEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 76432110 1224677899999999986555332 567777776643 56655542
Q ss_pred ecCCCCCCcccHHHHHHHHHHHHHH
Q 025927 196 VNPGFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 196 V~PGfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
-.|-..-.++.+.++.+++..
T Consensus 179 ----T~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 179 ----TIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp ----SSCCCCHHHHHHHHHHHHTTS
T ss_pred ----CCCCcCHHHHHHHHHHHHHhC
Confidence 223232234455556665543
No 161
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=86.16 E-value=4.1 Score=35.95 Aligned_cols=161 Identities=14% Similarity=0.186 Sum_probs=109.5
Q ss_pred HHHHHHHcCCCEEEeeeccCcccCC-CCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc---c
Q 025927 75 QVKAVELAGCDWIHVDVMDGRFVPN-ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS---S 150 (246)
Q Consensus 75 ~i~~l~~~g~d~lHiDIMDG~FVpN-~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~---~ 150 (246)
-....+++|+|.|=+=.- |. =-+-...+..||+..+.++...+-.. +.+++.-.+..++++|+=+|.- +
T Consensus 30 aA~~ae~aGAdgITvHlR-----eDrRHI~d~Dv~~L~~~~~~~lNlE~a~t--~emi~ia~~~kP~~vtLVPE~r~e~T 102 (243)
T 1m5w_A 30 AAFIAEQAGADGITVHLR-----EDRRHITDRDVRILRQTLDTRMNLEMAVT--EEMLAIAVETKPHFCCLVPEKRQEVT 102 (243)
T ss_dssp HHHHHHTTTCSEEEEECC-----TTCSSSCHHHHHHHHHHCSSEEEEEECSS--HHHHHHHHHHCCSEEEECCCCSSCSS
T ss_pred HHHHHHHcCCCEEEeCCC-----CCcccCCHHHHHHHHHhcCCCEEeccCCC--HHHHHHHHHcCCCEEEECCCCCCCcC
Confidence 345567899998766433 22 24556788888886566666655443 3577777788999999999831 0
Q ss_pred ----------cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCC-CCcccHHHHHHHHHHHH
Q 025927 151 ----------TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG-GQSFIESQVKKISDLRR 218 (246)
Q Consensus 151 ----------~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfg-GQ~F~~~~l~KI~~lr~ 218 (246)
...+..+++.+|+.|+++.|-+.|+- +.++.-.. -+|+|-+-|-.=.-+ +..-...-+++++..-+
T Consensus 103 TegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~--~qi~aA~~~GA~~IELhTG~Ya~a~~~~~~~~el~~i~~aa~ 180 (243)
T 1m5w_A 103 TEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADE--EQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAAT 180 (243)
T ss_dssp CCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCH--HHHHHHHHTTCSEEEEECHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHhCcCEEEEechhhhcCCCchhHHHHHHHHHHHHH
Confidence 12367889999999999999999863 44443222 589988876431111 11112456788888878
Q ss_pred HHHhcCCCCeEEEeCCCChhhhhhcccC
Q 025927 219 MCLEKGVNPWIEVDGGVGPKNAYKVPNI 246 (246)
Q Consensus 219 l~~~~~~~~~I~VDGGI~~e~i~~l~~~ 246 (246)
+..+.|+ .+..=-|+|.+|++.+..|
T Consensus 181 ~A~~lGL--~VnAGHgL~y~Nv~~ia~i 206 (243)
T 1m5w_A 181 FAASLGL--KVNAGHGLTYHNVKAIAAI 206 (243)
T ss_dssp HHHHTTC--EEEEESSCCTTTHHHHHTC
T ss_pred HHHHcCC--EEecCCCCCHHHHHHHhhC
Confidence 7776664 6778899999999877543
No 162
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=86.12 E-value=3 Score=37.20 Aligned_cols=158 Identities=15% Similarity=0.220 Sum_probs=103.9
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCC-CCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc---
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPN-ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS--- 149 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN-~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~--- 149 (246)
+-....+++| |.|=+=.- |+ =-+-...+..|++....++.+-+-. -+.+++...+..++++|+=+|.-
T Consensus 29 ~aA~~ae~aG-dgITvHlR-----eDrRHI~d~Dv~~L~~~~~~~lNlE~a~--t~emi~ial~~kP~~vtLVPEkreE~ 100 (260)
T 3o6c_A 29 EAAFIVARHG-DQITLHVR-----EDRRHAQDFDLENIIKFCKSPVNLECAL--NDEILNLALKLKPHRVTLVPEKREEL 100 (260)
T ss_dssp HHHHHHHHHS-SEEEEECC-----TTCSSSCHHHHHHHHHHCSSCEEEEECS--CHHHHHHHHHHCCSEEEECCCSGGGB
T ss_pred HHHHHHHHhC-CeEEEeeC-----CCcccCCHHHHHHHHHHcCCCEEeecCC--CHHHHHHHHHcCCCEEEECCCCCCcc
Confidence 3445567888 98544322 22 2345567888888766676666544 33667777888999999999842
Q ss_pred c--------cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCC------------------
Q 025927 150 S--------TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGG------------------ 202 (246)
Q Consensus 150 ~--------~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgG------------------ 202 (246)
+ ...+..+++.+|+.|+++.|-+.|+- +.++.-.. -+|+|-+-|-. |+.
T Consensus 101 TTegGldv~~~~L~~~i~~L~~~GIrVSLFIDpd~--~qi~aA~~~GAd~IELhTG~--YA~a~~~~~sn~~~~~~~~~~ 176 (260)
T 3o6c_A 101 TTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPSL--EDIEKSKILKAQFIELHTGH--YANLHNALFSNISHTAFALKE 176 (260)
T ss_dssp CTTSSBCTTCTTHHHHHHHHHHTTCEEEEEECSCH--HHHHHHHHTTCSEEEECCHH--HHHHHHHHHSSGGGSTTCCGG
T ss_pred CCCCChhhCHHHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHhCCCEEEEechH--hhhhhhccccccccccccccc
Confidence 1 12367899999999999999999863 33332211 58888876531 111
Q ss_pred --------CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhccc
Q 025927 203 --------QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 203 --------Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
+.-....++++++.-++..+.| ..+..=.|+|.+|++.+.+
T Consensus 177 l~~~~~~~~~~~~~el~~l~~aA~~A~~lG--L~VnAGHGL~y~Nv~~ia~ 225 (260)
T 3o6c_A 177 LDQDKKTLQAQFEKELQNLELCAKKGLELG--LKVAAGHGLNYKNVKPVVK 225 (260)
T ss_dssp GCSCHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEECTTCCTTTTHHHHT
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHcC--CEEecCCCCCHHHHHHHHh
Confidence 1113346667777666666655 4677888999999987654
No 163
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.07 E-value=6.2 Score=35.39 Aligned_cols=122 Identities=18% Similarity=0.183 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCccc-----CCC---------------CCCHHHHhhcccCCCCCeeEEEecc-----
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFV-----PNI---------------TIGPLVVDALRPVTDLPLDVHLMIV----- 125 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN~---------------tfgp~~I~~ir~~t~~plDvHLMV~----- 125 (246)
.+.+..+++.++|.|.+-+..--|..+ |+. .|--++++++|+..++|+-+-|-..
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~ 224 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDK 224 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTT
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCC
Confidence 455667777889999987776544221 321 2236788899886688888877553
Q ss_pred -----CcccchHHHHhcCCCEEEEccCCc-----c-cc-cHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh--cce
Q 025927 126 -----EPEQRVPDFIKAGADIVSVHCEQS-----S-TI-HLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV--VDL 190 (246)
Q Consensus 126 -----~P~~~i~~~~~agad~It~H~E~~-----~-~~-~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~--vD~ 190 (246)
+...+++.+.++|+|+|++|.-.. . .. .-..+++.+|+.- +.=|..+-+ ++.+..+.+|.. +|+
T Consensus 225 g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~ 303 (338)
T 1z41_A 225 GLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNGRADL 303 (338)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcCCceE
Confidence 233566777889999999985210 0 11 1235677777642 333455555 478888888875 898
Q ss_pred EEE
Q 025927 191 VLI 193 (246)
Q Consensus 191 VLv 193 (246)
|.+
T Consensus 304 V~i 306 (338)
T 1z41_A 304 IFI 306 (338)
T ss_dssp EEE
T ss_pred Eee
Confidence 776
No 164
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=86.02 E-value=6.9 Score=33.55 Aligned_cols=141 Identities=11% Similarity=0.112 Sum_probs=77.2
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCC-CeeEEEec----c--C-c
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDL-PLDVHLMI----V--E-P 127 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~-plDvHLMV----~--~-P 127 (246)
+|..+........+.+.++.+.+.|.+.+-+=...-++.....+.+..++.+++ ..++ .+-+|.-. . + |
T Consensus 7 klG~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~ 86 (303)
T 3aal_A 7 KIGSHVSMSGKKMLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNL 86 (303)
T ss_dssp CEEEECCCCTTTTHHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCH
T ss_pred eeceeeecCCCccHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCcH
Confidence 466666555444688999999999999988822211222222233334444433 3566 67777421 1 2 2
Q ss_pred c----------cchHHHHhcCCCEEEEccCCc----ccccHHHHHHHHHHc-----CCcEEEEEcCC------CChHHHH
Q 025927 128 E----------QRVPDFIKAGADIVSVHCEQS----STIHLHRTLNQIKDL-----GAKAGVVLNPA------TSLSAIE 182 (246)
Q Consensus 128 ~----------~~i~~~~~agad~It~H~E~~----~~~~~~~~i~~Ik~~-----G~k~GlAlnP~------Tpve~l~ 182 (246)
. +.++...+.|+.+|.+|.=.. ......++++.+++. |++.++=-.|+ +..+.+.
T Consensus 87 ~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~ 166 (303)
T 3aal_A 87 DTFSLGVDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELA 166 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHH
Confidence 2 123344557999999996321 012244556666654 44433322221 2667777
Q ss_pred Hhhhhcce--EEEEeecCC
Q 025927 183 CVLDVVDL--VLIMSVNPG 199 (246)
Q Consensus 183 ~~l~~vD~--VLvMsV~PG 199 (246)
.+++.++. =+-+..++|
T Consensus 167 ~li~~v~~~~~vg~~lD~~ 185 (303)
T 3aal_A 167 YIIDGVAYNDKLSVCFDTC 185 (303)
T ss_dssp HHHHHCTTGGGEEEEEEHH
T ss_pred HHHHhcCCCCCEEEEEEcc
Confidence 88888762 244455665
No 165
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=85.82 E-value=1.6 Score=35.86 Aligned_cols=137 Identities=16% Similarity=0.144 Sum_probs=75.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEE-eccCcccchHHHHhcCCCEEEEccCCcc--
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHL-MIVEPEQRVPDFIKAGADIVSVHCEQSS-- 150 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHL-MV~~P~~~i~~~~~agad~It~H~E~~~-- 150 (246)
..++.+.++|+|.+++-..-+. .+ -.+.++.++++ +.++-+-+ -+.+|...++.+.+.|+|+|+++.-...
T Consensus 68 ~~~~~~~~~Gad~v~v~~~~~~--~~---~~~~~~~~~~~-g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~ 141 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGVTDV--LT---IQSCIRAAKEA-GKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQA 141 (211)
T ss_dssp HHHHHHHHTTCSEEEEETTSCH--HH---HHHHHHHHHHH-TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCh--hH---HHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccc
Confidence 3488889999999999433210 00 02345555554 33222111 0234445577888899999998743100
Q ss_pred -cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHh
Q 025927 151 -TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLE 222 (246)
Q Consensus 151 -~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~ 222 (246)
.......++++|+.--+.=+....+-..+.+..++.. +|.|.+=+-- +.+. +-.+.++++++.+.+
T Consensus 142 ~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvvGsai--~~~~----d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 142 AGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAI--THAA----DPAGEARKISQVLLQ 209 (211)
T ss_dssp TTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCSEEEECHHH--HTCS----SHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCEEEECHHH--cCCC----CHHHHHHHHHHHHhh
Confidence 0112356777777521333455555557788888775 8988774321 1111 223455666665543
No 166
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=85.50 E-value=3.5 Score=41.34 Aligned_cols=128 Identities=19% Similarity=0.136 Sum_probs=75.6
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..|...+.+.++.+.+.|++++++| ||=|-+.-. + -....++ ..+|.+|
T Consensus 346 ~~~ee~v~~~ad~~~~~G~~~~viD--DGW~~~r~~---~----~~~~Gd~-------~~d~~kF--------------- 394 (732)
T 2xn2_A 346 DFNEDKLKTIVDKAKKLGLEMFVLD--DGWFGHRDD---D----NSSLGDW-------KVYKKKF--------------- 394 (732)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEC--SSSBTTCSS---T----TSCTTCC-------SBCTTTC---------------
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEc--CcccccCCC---C----ccccCce-------eeCchhc---------------
Confidence 3566788899999999999999998 777742100 0 0000111 1133322
Q ss_pred cCCcccccHHHHHHHHHHcCCcEEEEEcCCC--ChHHHHHhhhhcceEEEEeecCCC----C-CCc----ccHHHHHH-H
Q 025927 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT--SLSAIECVLDVVDLVLIMSVNPGF----G-GQS----FIESQVKK-I 213 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T--pve~l~~~l~~vD~VLvMsV~PGf----g-GQ~----F~~~~l~K-I 213 (246)
...+..+++++|+.|+|+||.++|.+ +-+.+.. ..-|++ +. .||. + +|- -+|++.+- .
T Consensus 395 -----P~Glk~lv~~ih~~Glk~GlW~~P~~v~~~S~l~~--~hpdw~--~~-~~g~~~~~~~~~~~LD~t~Pev~~~i~ 464 (732)
T 2xn2_A 395 -----PNGLGHFADYVHEQGLKFGLWFEPEMISYESNLYK--EHPDYL--XH-VPGRKPCPSRNQYVLELGRKEVRDNIF 464 (732)
T ss_dssp -----TTCHHHHHHHHHHTTCEEEEEECTTEECSSSHHHH--HCGGGB--CC-CTTSCCCCBTTBEEBCTTSHHHHHHHH
T ss_pred -----CccHHHHHHHHHHcCCEEEEEeCccccCCCCHHHH--hCchhe--ec-CCCCCCccCCceEEEcCCCHHHHHHHH
Confidence 01378899999999999999999973 2222222 122332 11 2342 2 221 24566655 3
Q ss_pred HHHHHHHHhcCCCCeEEEeCCC
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGV 235 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI 235 (246)
+.+.+++.+.|.++ |-+|.+-
T Consensus 465 ~~l~~~~~~~GVD~-~K~D~~~ 485 (732)
T 2xn2_A 465 EQMVKILDSKKIDY-IKWDMNR 485 (732)
T ss_dssp HHHHHHHTTSCCCE-EEECCCC
T ss_pred HHHHHHHHHcCCCE-EEECCCc
Confidence 45677787888774 7888863
No 167
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=85.48 E-value=4.1 Score=34.59 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=69.3
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCC-------CCeeEE-------Eecc--------Ccccch
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTD-------LPLDVH-------LMIV--------EPEQRV 131 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~-------~plDvH-------LMV~--------~P~~~i 131 (246)
++++.+.+.|+|.+|+--.+- .-.+.|+.++++.+..+ +-+|++ +.+. ++..++
T Consensus 87 ~~i~~~~~~Gad~v~lg~~~~----~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~ 162 (266)
T 2w6r_A 87 EHFLEAFLAGADKALAASVFH----FREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWV 162 (266)
T ss_dssp HHHHHHHHHTCSEEECCCCC----------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHH
T ss_pred HHHHHHHHcCCcHhhhhHHHH----hCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHH
Confidence 446666678999999865431 01124566766644322 345664 2221 356777
Q ss_pred HHHHhcCCCEEEEccCCc----ccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh-cceEEEEeecCCCCCCcc
Q 025927 132 PDFIKAGADIVSVHCEQS----STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV-VDLVLIMSVNPGFGGQSF 205 (246)
Q Consensus 132 ~~~~~agad~It~H~E~~----~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F 205 (246)
+.+.++|++.|.+|--.. ...+ ...++.+++.- ..=+..+-+ .+.+.+..++.. +|.|++.+. +-+.++
T Consensus 163 ~~~~~~G~~~i~~t~~~~~g~~~g~~-~~~i~~l~~~~-~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsa---l~~~~~ 237 (266)
T 2w6r_A 163 VEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASV---FHFREI 237 (266)
T ss_dssp HHHHHTTCSEEEEEETTTTTTCSCCC-HHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESTT---TC----
T ss_pred HHHHHcCCCEEEEEeecCCCCcCCCC-HHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHH---HHcCCC
Confidence 788889999999984210 0122 35677777653 333344444 557899998864 899998764 333333
Q ss_pred cHHHHHHHHHHHHHHHhcCCC
Q 025927 206 IESQVKKISDLRRMCLEKGVN 226 (246)
Q Consensus 206 ~~~~l~KI~~lr~l~~~~~~~ 226 (246)
. ++++++++.++|++
T Consensus 238 ~------~~~~~~~l~~~g~~ 252 (266)
T 2w6r_A 238 D------MRELKEYLKKHGVN 252 (266)
T ss_dssp ---------------------
T ss_pred C------HHHHHHHHHHCCCc
Confidence 2 34455555555543
No 168
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=85.32 E-value=3.6 Score=35.53 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=82.9
Q ss_pred HHHHhhcccCCCCCeeEEEeccCcccc----------hHHHHhcCCCEE-EEccC--CcccccHHHHHHHHHHcCCcEEE
Q 025927 104 PLVVDALRPVTDLPLDVHLMIVEPEQR----------VPDFIKAGADIV-SVHCE--QSSTIHLHRTLNQIKDLGAKAGV 170 (246)
Q Consensus 104 p~~I~~ir~~t~~plDvHLMV~~P~~~----------i~~~~~agad~I-t~H~E--~~~~~~~~~~i~~Ik~~G~k~Gl 170 (246)
...+..+++.+++| +-.+|-..+ +..+.++|||+| ..|.| .. ..++.+.++..+++|+.+=+
T Consensus 48 ~~~L~~v~~~~~i~----v~aQdv~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~-~~e~~~k~~~A~~~GL~~iv 122 (225)
T 1hg3_A 48 LVDLRMIAESVEIP----VFAQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMI-LADLEAAIRRAEEVGLMTMV 122 (225)
T ss_dssp HHHHHHHHHSCSSC----BEESCCCSCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCCB-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhcCCc----eeeeeCCcccCCCccCcccHHHHHHcCCCEEEECcchhcCC-HHHHHHHHHHHHHCCCEEEE
Confidence 34566776655444 444554444 778899999965 56777 32 23477888889999999887
Q ss_pred EEcCCCChHHHHHhhhhcceEEEEeecCCC---CC---CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChhhhhhc
Q 025927 171 VLNPATSLSAIECVLDVVDLVLIMSVNPGF---GG---QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKV 243 (246)
Q Consensus 171 AlnP~Tpve~l~~~l~~vD~VLvMsV~PGf---gG---Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l 243 (246)
-+.-....+.+ ..++- .+..+||-+ .| +.|.++.++...++.+...+ +..|.-=|||+..|..++
T Consensus 123 cVge~~e~~~~----~~~~~-~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~---~~~ilyggsV~~~n~~~~ 193 (225)
T 1hg3_A 123 CSNNPAVSAAV----AALNP-DYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNP---EVKVLCGAGISTGEDVKK 193 (225)
T ss_dssp EESSHHHHHHH----HTTCC-SEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCT---TSEEEEESSCCSHHHHHH
T ss_pred EeCCHHHHHHH----hcCCC-CEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccC---CCEEEEeCCCCcHHHHHH
Confidence 77643332222 23332 388999954 35 78999866665554444332 467888999998887654
No 169
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=85.30 E-value=9 Score=31.99 Aligned_cols=139 Identities=12% Similarity=0.099 Sum_probs=75.2
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC---CCCC---eeEEE------eccC
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLP---LDVHL------MIVE 126 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~---t~~p---lDvHL------MV~~ 126 (246)
+|..++... ..+.+.++.+.+.|.+.+-+-.-+.+..+.-.+.+..++++++. .++. +-+|. ...+
T Consensus 3 ~~G~~~~~~--~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~ 80 (285)
T 1qtw_A 3 YIGAHVSAA--GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPV 80 (285)
T ss_dssp EEEEECCCT--TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSS
T ss_pred ceeEEeccc--cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCC
Confidence 344444332 46889999999999998888433333222233555666666442 4554 45553 1123
Q ss_pred cc----------cchHHHHhcCCCEEEEccCCcc-----cccHHHHHHHHH-----HcCCcEEEEEcCC------CChHH
Q 025927 127 PE----------QRVPDFIKAGADIVSVHCEQSS-----TIHLHRTLNQIK-----DLGAKAGVVLNPA------TSLSA 180 (246)
Q Consensus 127 P~----------~~i~~~~~agad~It~H~E~~~-----~~~~~~~i~~Ik-----~~G~k~GlAlnP~------Tpve~ 180 (246)
|+ +.++...+.|+.+|.+|.-... .....++++.++ +.|++.++=-.+. .+.+.
T Consensus 81 ~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~ 160 (285)
T 1qtw_A 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH 160 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHH
Confidence 32 1244445679999999964210 111223333333 2566655543322 35677
Q ss_pred HHHhhhhc-ce-EEEEeecCC
Q 025927 181 IECVLDVV-DL-VLIMSVNPG 199 (246)
Q Consensus 181 l~~~l~~v-D~-VLvMsV~PG 199 (246)
+..+++.+ |. -+=+..++|
T Consensus 161 ~~~l~~~v~~~~~~g~~~D~~ 181 (285)
T 1qtw_A 161 LAAIIDGVEDKSRVGVCIDTC 181 (285)
T ss_dssp HHHHHHHCSCGGGEEEEEEHH
T ss_pred HHHHHHhhcCccceEEEEEhH
Confidence 88888877 32 133455664
No 170
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=85.25 E-value=1.2 Score=38.95 Aligned_cols=80 Identities=14% Similarity=0.229 Sum_probs=58.1
Q ss_pred EEEeccCcccc-----hHHHHhcCCCEEEEccCC-cccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEE
Q 025927 120 VHLMIVEPEQR-----VPDFIKAGADIVSVHCEQ-SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 120 vHLMV~~P~~~-----i~~~~~agad~It~H~E~-~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLv 193 (246)
-|+..-+|++. ++.+.+.|+|.|-+=-.. .+.++..++++.||+ ...=+.|-|..+ +.+.+.+|.+++
T Consensus 13 ~h~~~~DPdk~~~~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~--~~~Piil~p~~~----~~~~~gaD~il~ 86 (235)
T 3w01_A 13 RHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR--YPLPLVLEISNI----ESVMPGFDFYFV 86 (235)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT--SCSCEEEECCCS----TTCCTTCSEEEE
T ss_pred eEEEeECCCCcCCHHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC--cCCCEEEecCCH----HHhhcCCCEEEE
Confidence 37888888763 566788999999987764 234568889999988 455666677754 345679999999
Q ss_pred EeecCCCCCCccc
Q 025927 194 MSVNPGFGGQSFI 206 (246)
Q Consensus 194 MsV~PGfgGQ~F~ 206 (246)
|+|-++- ...|+
T Consensus 87 pslln~~-~~~~i 98 (235)
T 3w01_A 87 PTVLNST-DVAFH 98 (235)
T ss_dssp EEETTBS-SGGGT
T ss_pred ccccCCC-Ccchh
Confidence 9998763 33443
No 171
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=85.05 E-value=7.7 Score=32.13 Aligned_cols=107 Identities=15% Similarity=0.141 Sum_probs=63.1
Q ss_pred CcccchHHHHhcCCCEEEEc-cCCc----ccccHHHHHHHHHHcCCcEE-EEEc--CC--CC------hHHHHHhhhh--
Q 025927 126 EPEQRVPDFIKAGADIVSVH-CEQS----STIHLHRTLNQIKDLGAKAG-VVLN--PA--TS------LSAIECVLDV-- 187 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H-~E~~----~~~~~~~~i~~Ik~~G~k~G-lAln--P~--Tp------ve~l~~~l~~-- 187 (246)
.++..++...++|.+.|-+. .+.. ....+.++.+.+++.|+++. +... .. .+ ++.++..++.
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 94 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCK 94 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 45567778888899988887 5421 12456677888888998864 3322 21 11 3444444442
Q ss_pred ---cceEEEEeecCCCCCCcc-----cHHHHHHHHHHHHHHHhcCCCCeEEEeCCC
Q 025927 188 ---VDLVLIMSVNPGFGGQSF-----IESQVKKISDLRRMCLEKGVNPWIEVDGGV 235 (246)
Q Consensus 188 ---vD~VLvMsV~PGfgGQ~F-----~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI 235 (246)
++.|.+ .||+....+ .....+.++++-++..+.|..+-+|-.++-
T Consensus 95 ~lG~~~v~~---~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~ 147 (278)
T 1i60_A 95 TLGVKYVVA---VPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHP 147 (278)
T ss_dssp HHTCCEEEE---ECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCT
T ss_pred HcCCCEEEE---ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCc
Confidence 455554 355543222 345566677777777777776667765543
No 172
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=84.95 E-value=7.6 Score=32.14 Aligned_cols=129 Identities=9% Similarity=0.019 Sum_probs=70.7
Q ss_pred Eeeeecc-cChhhHHHHHHHHHHcCCCEEEee-eccCcccCCCCCCHHHHhhcccCCCCCee-EEEec----cCcc----
Q 025927 60 VSPSILS-ANFAKLGEQVKAVELAGCDWIHVD-VMDGRFVPNITIGPLVVDALRPVTDLPLD-VHLMI----VEPE---- 128 (246)
Q Consensus 60 IsPSIl~-aD~~~l~~~i~~l~~~g~d~lHiD-IMDG~FVpN~tfgp~~I~~ir~~t~~plD-vHLMV----~~P~---- 128 (246)
|+-|.++ ..-..+.+.++.+.+.|.+.+-+. .-+.+-.+. .-..+.++++-+..++.+. +|.-. .+|.
T Consensus 3 lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 81 (278)
T 1i60_A 3 LCFNEATTLENSNLKLDLELCEKHGYDYIEIRTMDKLPEYLK-DHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNE 81 (278)
T ss_dssp EEEEGGGGTTTCCHHHHHHHHHHTTCSEEEEETTTHHHHHTT-SSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHH
T ss_pred eEechhhcccCCCHHHHHHHHHHhCCCEEEEccHHHHHHHhc-cCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHH
Confidence 4555555 344678889999999999988776 322110011 1234444444444566554 66532 2332
Q ss_pred ------cchHHHHhcCCCEEEEccCCc----c--------cccHHHHHHHHHHcCCcEEEEEcCCC-----ChHHHHHhh
Q 025927 129 ------QRVPDFIKAGADIVSVHCEQS----S--------TIHLHRTLNQIKDLGAKAGVVLNPAT-----SLSAIECVL 185 (246)
Q Consensus 129 ------~~i~~~~~agad~It~H~E~~----~--------~~~~~~~i~~Ik~~G~k~GlAlnP~T-----pve~l~~~l 185 (246)
+.++...+.|+++|.+|.-.. . .+.+.++.+..++.|++.++=-.+.+ ..+.+..++
T Consensus 82 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~ 161 (278)
T 1i60_A 82 IITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIV 161 (278)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHH
Confidence 233344557999999985211 0 01133444555667887766544433 456666666
Q ss_pred hhcc
Q 025927 186 DVVD 189 (246)
Q Consensus 186 ~~vD 189 (246)
+.+|
T Consensus 162 ~~~~ 165 (278)
T 1i60_A 162 NTVN 165 (278)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 6654
No 173
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=84.92 E-value=9.8 Score=33.16 Aligned_cols=127 Identities=19% Similarity=0.144 Sum_probs=80.9
Q ss_pred CCCCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeee--ccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcc-
Q 025927 53 FSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDV--MDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPE- 128 (246)
Q Consensus 53 ~~~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDI--MDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~- 128 (246)
+-.++.+|+.+|..-+...+-++++++...|+|.+=+-+ .+. .++...=.+.+..+|+.+ ++|+-+ +.++.
T Consensus 15 ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~--~~~~~~v~~~l~~lr~~~~~lPiI~---T~Rt~~ 89 (258)
T 4h3d_A 15 IGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFEN--VENIKEVKEVLYELRSYIHDIPLLF---TFRSVV 89 (258)
T ss_dssp ETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT--TTCHHHHHHHHHHHHHHCTTSCEEE---ECCCGG
T ss_pred eCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccc--cCCHHHHHHHHHHHHHhcCCCCEEE---EEechh
Confidence 556788999999999999999999999999999876544 332 122222234556666643 567633 33332
Q ss_pred ----------cchHHH---HhcC-CCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEc--CCCCh-HHHHHhh
Q 025927 129 ----------QRVPDF---IKAG-ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN--PATSL-SAIECVL 185 (246)
Q Consensus 129 ----------~~i~~~---~~ag-ad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAln--P~Tpv-e~l~~~l 185 (246)
.|++.+ .+.| +|+|=+-+.. ..+....+++..++.|.|+=+... -+||- +++...+
T Consensus 90 EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~-~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~ 162 (258)
T 4h3d_A 90 EGGEKLISRDYYTTLNKEISNTGLVDLIDVELFM-GDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRL 162 (258)
T ss_dssp GTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG-CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc-cHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHH
Confidence 344433 3445 8998877653 123345677777888888877764 34663 5555544
No 174
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=84.45 E-value=3.2 Score=37.95 Aligned_cols=122 Identities=14% Similarity=0.159 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccC----ccc-CC---------------CCCCHHHHhhcccCCC-CCeeEEEeccC---
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDG----RFV-PN---------------ITIGPLVVDALRPVTD-LPLDVHLMIVE--- 126 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG----~FV-pN---------------~tfgp~~I~~ir~~t~-~plDvHLMV~~--- 126 (246)
.+.+..+++.++|.|.+++..--| +|. |+ .-|-.++++++|+..+ -|+-+-|=..+
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 445556667889999999987654 222 32 2245677888988653 26666444331
Q ss_pred -----------cccchHHHHhcCCCEEEEccCCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--cceE
Q 025927 127 -----------PEQRVPDFIKAGADIVSVHCEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLV 191 (246)
Q Consensus 127 -----------P~~~i~~~~~agad~It~H~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~--vD~V 191 (246)
...+++.+.++|+|+|++|.-.. ........++.+|+.= +.=|+.+-+-..+..+++|.. +|+|
T Consensus 242 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~-~iPvi~~Ggit~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 242 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-HGVIIGAGAYTAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC-CCCEEEECCcCHHHHHHHHHCCCccEE
Confidence 11246677789999999996310 0011235677788653 333555555568888888875 8987
Q ss_pred EE
Q 025927 192 LI 193 (246)
Q Consensus 192 Lv 193 (246)
.+
T Consensus 321 ~~ 322 (364)
T 1vyr_A 321 AF 322 (364)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 175
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=84.30 E-value=9.7 Score=34.14 Aligned_cols=114 Identities=14% Similarity=0.130 Sum_probs=69.3
Q ss_pred HHHHHHHHcC--CCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEE--ccCCc
Q 025927 74 EQVKAVELAG--CDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV--HCEQS 149 (246)
Q Consensus 74 ~~i~~l~~~g--~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~--H~E~~ 149 (246)
+.++.+.++| ++++++|..-| +.....+.|+++|+.++.++-+.=-+..+ ...+.+.++|+|.|.+ |.-..
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G----~~~~~~~~i~~lr~~~~~~~vi~G~v~s~-e~A~~a~~aGad~Ivvs~hgG~~ 183 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHG----HSNAVINMIQHIKKHLPESFVIAGNVGTP-EAVRELENAGADATKVGIGPGKV 183 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSC----CSHHHHHHHHHHHHHCTTSEEEEEEECSH-HHHHHHHHHTCSEEEECSSCSTT
T ss_pred HHHHHHHhcCCCCCEEEEECCCC----CcHHHHHHHHHHHHhCCCCEEEECCcCCH-HHHHHHHHcCCCEEEEecCCCce
Confidence 5577888889 99999988544 22334578899988776454443334455 4577889999999999 64310
Q ss_pred cc-------c-c--HHHHHHHHHHcCCcEEEEEc--CCCChHHHHHhhhhcceEEE
Q 025927 150 ST-------I-H--LHRTLNQIKDLGAKAGVVLN--PATSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 150 ~~-------~-~--~~~~i~~Ik~~G~k~GlAln--P~Tpve~l~~~l~~vD~VLv 193 (246)
.. . . ....+..+++.- ++=|..+ -.|+-+.++-+.--+|.|.+
T Consensus 184 ~~~~~~~~~g~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGAdaV~i 238 (336)
T 1ypf_A 184 CITKIKTGFGTGGWQLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGATMVMI 238 (336)
T ss_dssp CHHHHHHSCSSTTCHHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTCSEEEE
T ss_pred eecccccCcCCchhHHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCCCEEEe
Confidence 00 0 0 245666666542 3333332 23555555544445888877
No 176
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=84.28 E-value=3.2 Score=36.91 Aligned_cols=149 Identities=12% Similarity=0.088 Sum_probs=92.4
Q ss_pred HHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHH
Q 025927 79 VELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTL 158 (246)
Q Consensus 79 l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i 158 (246)
..++|+..|=+ ..|..| |.-+.+.+.++|+.+++|+-.-=.+-+|.+.. +-..+|||.|-.=+...+...+.+++
T Consensus 72 ~~~~GA~aiSV-LTd~~~---F~Gs~~~L~~vr~~v~lPvLrKDFiid~yQI~-eAr~~GADaILLI~a~L~~~~l~~l~ 146 (258)
T 4a29_A 72 FMERYAVGLSI-TTEEKY---FNGSYETLRKIASSVSIPILMSDFIVKESQID-DAYNLGADTVLLIVKILTERELESLL 146 (258)
T ss_dssp HHTTTCSEEEE-ECCSTT---TCCCHHHHHHHHTTCSSCEEEESCCCSHHHHH-HHHHHTCSEEEEEGGGSCHHHHHHHH
T ss_pred HHhCCCeEEEE-eCCCCC---CCCCHHHHHHHHHhcCCCEeeccccccHHHHH-HHHHcCCCeeehHHhhcCHHHHHHHH
Confidence 34579998776 567666 66688999999999999963332334555433 33557999998877765445688999
Q ss_pred HHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-
Q 025927 159 NQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG- 236 (246)
Q Consensus 159 ~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~- 236 (246)
+..++.|+.+=+=+. ..++++..+. ..++| .||--- =..|.-+ ++.-.+|..++++ +..+..-+||+
T Consensus 147 ~~A~~lGl~~LvEVh---~~~El~rAl~~~a~iI---GINNRn-L~tf~vd-l~~t~~L~~~ip~---~~~~VsESGI~t 215 (258)
T 4a29_A 147 EYARSYGMEPLILIN---DENDLDIALRIGARFI---GIMSRD-FETGEIN-KENQRKLISMIPS---NVVKVAKLGISE 215 (258)
T ss_dssp HHHHHTTCCCEEEES---SHHHHHHHHHTTCSEE---EECSBC-TTTCCBC-HHHHHHHHTTSCT---TSEEEEEESSCC
T ss_pred HHHHHHhHHHHHhcc---hHHHHHHHhcCCCcEE---EEeCCC-ccccccC-HHHHHHHHhhCCC---CCEEEEcCCCCC
Confidence 999999999877665 3455555443 45655 443210 0112211 3333444444443 45566688984
Q ss_pred hhhhhhc
Q 025927 237 PKNAYKV 243 (246)
Q Consensus 237 ~e~i~~l 243 (246)
.+.+..+
T Consensus 216 ~~dv~~l 222 (258)
T 4a29_A 216 RNEIEEL 222 (258)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4455544
No 177
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=84.15 E-value=2.9 Score=34.79 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=79.7
Q ss_pred CCcEEeeeeccc-ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEe---c--cCcc-
Q 025927 56 SDIIVSPSILSA-NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM---I--VEPE- 128 (246)
Q Consensus 56 ~~~~IsPSIl~a-D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLM---V--~~P~- 128 (246)
+..+++-+.++. .-..+.+.++.+.+.|.+.+-+-.-+ + .....+.++++-+-.++.+..|-. . .+|.
T Consensus 3 ~~~~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~--~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~ 77 (275)
T 3qc0_A 3 QVEGLSINLATIREQCGFAEAVDICLKHGITAIAPWRDQ--V---AAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASG 77 (275)
T ss_dssp CCTTEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECBHHH--H---HHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHH
T ss_pred CcccceeeeeeccCCCCHHHHHHHHHHcCCCEEEecccc--c---cccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHH
Confidence 345677777777 56789999999999999998875421 1 011233333333334665544331 2 2231
Q ss_pred ---------cchHHHHhcCCCEEEEccCCcc-------------cccHHHHHHHHHHcCCcEEEEE-cC--------CCC
Q 025927 129 ---------QRVPDFIKAGADIVSVHCEQSS-------------TIHLHRTLNQIKDLGAKAGVVL-NP--------ATS 177 (246)
Q Consensus 129 ---------~~i~~~~~agad~It~H~E~~~-------------~~~~~~~i~~Ik~~G~k~GlAl-nP--------~Tp 177 (246)
+.++...+.|+++|.+|.-... .+.+.++....++.|++.++=- ++ -..
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~ 157 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNT 157 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCC
Confidence 2344445579999999962110 1124455666778888866552 22 124
Q ss_pred hHHHHHhhhhcceEEEEeecCC
Q 025927 178 LSAIECVLDVVDLVLIMSVNPG 199 (246)
Q Consensus 178 ve~l~~~l~~vD~VLvMsV~PG 199 (246)
.+.+..+++.+|--+-+..++|
T Consensus 158 ~~~~~~l~~~~~~~vg~~~D~~ 179 (275)
T 3qc0_A 158 LGQALDICETLGPGVGVAIDVY 179 (275)
T ss_dssp HHHHHHHHHHHCTTEEEEEEHH
T ss_pred HHHHHHHHHHhCcccEEEEEhh
Confidence 5667777777764233455555
No 178
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=84.14 E-value=4.9 Score=37.47 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=73.7
Q ss_pred CCCeeEEEeccCccc-------chHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh
Q 025927 115 DLPLDVHLMIVEPEQ-------RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV 187 (246)
Q Consensus 115 ~~plDvHLMV~~P~~-------~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~ 187 (246)
+.|+-|.=|+..+.. .+..|.++|+|+|=+=+- ..+-.+.+..||+. ..+=|+..-...-.....-++.
T Consensus 29 ~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp---~~~~a~al~~I~~~-~~vPlvaDiHf~~~lal~a~e~ 104 (366)
T 3noy_A 29 DAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVP---HKEDVEALEEIVKK-SPMPVIADIHFAPSYAFLSMEK 104 (366)
T ss_dssp TSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECC---SHHHHHHHHHHHHH-CSSCEEEECCSCHHHHHHHHHT
T ss_pred CCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCC---ChHHHHHHHHHHhc-CCCCEEEeCCCCHHHHHHHHHh
Confidence 468899999987764 456777899997766543 22345788888876 3444444444444445455555
Q ss_pred -cceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCC
Q 025927 188 -VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG 234 (246)
Q Consensus 188 -vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGG 234 (246)
+|. +.+|||-=|. -+|++++-+...++|....|.|-.|
T Consensus 105 G~dk---lRINPGNig~------~~~~~~vv~~ak~~~~piRIGvN~G 143 (366)
T 3noy_A 105 GVHG---IRINPGNIGK------EEIVREIVEEAKRRGVAVRIGVNSG 143 (366)
T ss_dssp TCSE---EEECHHHHSC------HHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred CCCe---EEECCcccCc------hhHHHHHHHHHHHcCCCEEEecCCc
Confidence 777 8999996553 3677888888888888888888766
No 179
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=84.08 E-value=3.6 Score=41.14 Aligned_cols=128 Identities=21% Similarity=0.178 Sum_probs=79.2
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..|-..+.+.++++.+.|++++.+| ||=|.+.-. .-...-+. ..+|.+|=
T Consensus 342 d~~e~~i~~~ad~aa~lG~e~fviD--DGWf~~r~~-------d~~~lGdW-------~~d~~kFP-------------- 391 (729)
T 4fnq_A 342 DFNEEKLVNIAKTEAELGIELFVLD--DGWFGKRDD-------DRRSLGDW-------IVNRRKLP-------------- 391 (729)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEC--SCCBTTCCS-------TTSCTTCC-------SBCTTTCT--------------
T ss_pred cCCHHHHHHHHHHHHhcCccEEEEc--ceeecCCCC-------CcccCCcE-------EEChhhcC--------------
Confidence 3566788889999999999999998 898754210 00000000 11222221
Q ss_pred cCCcccccHHHHHHHHHHcCCcEEEEEcCCC--ChHHHHHhhhhcceEEEEeecCCC-----CCCc----ccHHHHHHH-
Q 025927 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT--SLSAIECVLDVVDLVLIMSVNPGF-----GGQS----FIESQVKKI- 213 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T--pve~l~~~l~~vD~VLvMsV~PGf-----gGQ~----F~~~~l~KI- 213 (246)
..+..+.++||++|+|+||.+.|++ +-+.+..-. -|.++- .|+. .+|- =.|++.+-+
T Consensus 392 ------~Glk~Lad~vh~~GmkfGLW~epe~v~~~S~l~~~h--Pdw~~~---~~~~~~~~~r~q~~LD~~~P~v~~y~~ 460 (729)
T 4fnq_A 392 ------NGLDGLAKQVNELGMQFGLWVEPEMVSPNSELYRKH--PDWCLH---VPNRPRSEGRNQLVLDYSREDVCDYII 460 (729)
T ss_dssp ------THHHHHHHHHHHTTCEEEEEECTTEECSSSHHHHHC--GGGBCC---CTTSCCCCBTTBEEBCTTSHHHHHHHH
T ss_pred ------ccHHHHHHHHHHCCCEEEEEeeccccCCCcHHHHhC--chheec---cCccCCccCCccccccCCChhHHHHHH
Confidence 2367789999999999999999983 545444322 333322 1221 1121 147777775
Q ss_pred HHHHHHHHhcCCCCeEEEeCCC
Q 025927 214 SDLRRMCLEKGVNPWIEVDGGV 235 (246)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI 235 (246)
+.+.+++.+.|.++ |-+|+.-
T Consensus 461 ~~i~~ll~~~GidY-iK~D~n~ 481 (729)
T 4fnq_A 461 ETISNVLASAPITY-VKWDMNR 481 (729)
T ss_dssp HHHHHHHTTTTCCE-EEEECCC
T ss_pred HHHHHHHHHCCCCE-EEEcCCC
Confidence 56678888888875 8899754
No 180
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=83.84 E-value=1.9 Score=36.64 Aligned_cols=124 Identities=14% Similarity=0.073 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCCCeeEEEec------------------cCcc
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDLPLDVHLMI------------------VEPE 128 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~plDvHLMV------------------~~P~ 128 (246)
..+++.++.+.+.|.+.+-+-.-+.+. +.+..++++++ -.++.+-+|-.. .+|.
T Consensus 21 ~~l~~~l~~~~~~G~~~vEl~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 95 (290)
T 3tva_A 21 AGLGVHLEVAQDLKVPTVQVHAPHPHT-----RTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLE 95 (290)
T ss_dssp SSSSBCHHHHHHTTCSEEEEECCCGGG-----CSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTT
T ss_pred CCHHHHHHHHHHcCCCEEEecCCCCCc-----CCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHH
Confidence 456677888899999998887755432 44556665544 356766665321 1231
Q ss_pred ----------cchHHHHhcCCCEEEEccCCc----------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhc
Q 025927 129 ----------QRVPDFIKAGADIVSVHCEQS----------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV 188 (246)
Q Consensus 129 ----------~~i~~~~~agad~It~H~E~~----------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~v 188 (246)
+.++...+.|+++|.+|.=.. ..+.+.++....++.|++.++=-.+ .+.+.+..+++.+
T Consensus 96 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~-~~~~~~~~l~~~~ 174 (290)
T 3tva_A 96 TRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ-ESADHLLEFIEDV 174 (290)
T ss_dssp THHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC-CCHHHHHHHHHhc
Confidence 234444557999999984210 0112445566667778877665444 3456666777776
Q ss_pred ce-EEEEeecCC
Q 025927 189 DL-VLIMSVNPG 199 (246)
Q Consensus 189 D~-VLvMsV~PG 199 (246)
|- -+=+..++|
T Consensus 175 ~~~~~g~~~D~~ 186 (290)
T 3tva_A 175 NRPNLGINFDPA 186 (290)
T ss_dssp CCTTEEEEECHH
T ss_pred CCCCEEEEeccH
Confidence 52 133444554
No 181
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=83.81 E-value=2.9 Score=38.28 Aligned_cols=122 Identities=12% Similarity=0.084 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCccc-----CC---------------CCCCHHHHhhcccCCCC-CeeEEEeccC---
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFV-----PN---------------ITIGPLVVDALRPVTDL-PLDVHLMIVE--- 126 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN---------------~tfgp~~I~~ir~~t~~-plDvHLMV~~--- 126 (246)
.+.+..+++.++|.|.+++..--|..+ |+ .-|--++++++|+..+- |+-+-|=...
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 445556667889999999987554332 32 12345678888875432 6666554321
Q ss_pred ------c----ccchHHHHhcCCCEEEEccCCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--cceEE
Q 025927 127 ------P----EQRVPDFIKAGADIVSVHCEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLVL 192 (246)
Q Consensus 127 ------P----~~~i~~~~~agad~It~H~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~--vD~VL 192 (246)
+ ..+++.+.++|+|+|++|.-.. ....+..+++.+|+.= +.=|..+-+-..+..+++|.. +|+|.
T Consensus 242 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 242 GTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY-QGVLIYAGRYNAEKAEQAINDGLADMIG 320 (365)
T ss_dssp SCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHC-CCcEEEeCCCCHHHHHHHHHCCCcceeh
Confidence 1 2335677788999999996311 0111245677787653 223444445567888888864 89876
Q ss_pred E
Q 025927 193 I 193 (246)
Q Consensus 193 v 193 (246)
+
T Consensus 321 i 321 (365)
T 2gou_A 321 F 321 (365)
T ss_dssp C
T ss_pred h
Confidence 5
No 182
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=83.46 E-value=4.7 Score=34.46 Aligned_cols=85 Identities=11% Similarity=0.039 Sum_probs=59.6
Q ss_pred CCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 100 ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 100 ~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
.+|.++.++.+|+. .+++. .-|....|..+.+.+...|++.+..++... . .++++.+|++|+++.+. -.+ ..
T Consensus 149 ~SF~~~~l~~~~~~~p~~~~-~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~~v~~~~~~G~~v~~W-Tvn-~~ 221 (252)
T 3qvq_A 149 SSFNYFALVSAKALWPEIAR-GYNVSAIPSAWQERLEHLDCAGLHIHQSFF---D-VQQVSDIKAAGYKVLAF-TIN-DE 221 (252)
T ss_dssp EESCHHHHHHHHHHCTTSCE-EEECSSCCTTHHHHHHHHTCSEEEEEGGGC---C-HHHHHHHHHTTCEEEEE-CCC-CH
T ss_pred EeCCHHHHHHHHHHCCCCcE-EEEEecCchhHHHHHHHcCCeEEecchhhC---C-HHHHHHHHHCCCEEEEE-cCC-CH
Confidence 48999999999875 44443 335545566777777778999999888742 2 36788999999998876 333 34
Q ss_pred HHHHHhhh-hcceE
Q 025927 179 SAIECVLD-VVDLV 191 (246)
Q Consensus 179 e~l~~~l~-~vD~V 191 (246)
+.+..++. -||.|
T Consensus 222 ~~~~~l~~~GVdgI 235 (252)
T 3qvq_A 222 SLALKLYNQGLDAV 235 (252)
T ss_dssp HHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEE
Confidence 56666665 37764
No 183
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=83.38 E-value=8 Score=36.82 Aligned_cols=112 Identities=17% Similarity=0.265 Sum_probs=65.1
Q ss_pred cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCCCC
Q 025927 127 PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQ 203 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ 203 (246)
....++.+.++|+|.|.++.-.-......+.++++|+. +..+.+ .--+..+..+.+++. +|.|.+ ..-||...-
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~--g~v~t~e~a~~l~~aGaD~I~V-g~g~Gs~~~ 308 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKV-GIGPGSICT 308 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEE--EEECSHHHHHHHHHHTCSEEEE-CSSCCTTBC
T ss_pred hHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEE--cccCcHHHHHHHHHhCCCEEEE-CCCCCcCcc
Confidence 34667788999999999986531123455788888876 444433 222445666666654 898874 333443100
Q ss_pred c-----ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCC-hhhhhhc
Q 025927 204 S-----FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (246)
Q Consensus 204 ~-----F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~l 243 (246)
. +-...+.-|.++.+...+.+ ..|..||||. .+.+.++
T Consensus 309 tr~~~g~g~p~~~~i~~v~~~~~~~~--iPVIa~GGI~~~~di~ka 352 (496)
T 4fxs_A 309 TRIVTGVGVPQITAIADAAGVANEYG--IPVIADGGIRFSGDISKA 352 (496)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHGGGT--CCEEEESCCCSHHHHHHH
T ss_pred cccccCCCccHHHHHHHHHHHhccCC--CeEEEeCCCCCHHHHHHH
Confidence 0 00123444555555554433 5688999995 4555443
No 184
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=83.36 E-value=9.5 Score=34.68 Aligned_cols=104 Identities=11% Similarity=0.157 Sum_probs=60.6
Q ss_pred cchHHHHhc--CCCEEEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCCC-
Q 025927 129 QRVPDFIKA--GADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFGG- 202 (246)
Q Consensus 129 ~~i~~~~~a--gad~It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgG- 202 (246)
..++.+.+. |++.+.+|.-.-......+.++++|+. ++.+++. --++.+..+...+. +|.|.| +..||...
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g--~v~t~e~A~~a~~aGaD~I~v-~~g~G~~~~ 197 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAG--NVVTGEMVEELILSGADIIKV-GIGPGSVCT 197 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEE--EECSHHHHHHHHHTTCSEEEE-CSSCSTTBC
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEE--eCCCHHHHHHHHHhCCCEEEE-CCCCCcCcC
Confidence 345566666 999999985321123356778888887 5665542 23456777776654 999866 65565311
Q ss_pred -Cc---ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 203 -QS---FIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 203 -Q~---F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
.. +-..++.-+.++++..++. +..+..||||..
T Consensus 198 ~r~~~g~~~p~~~~l~~v~~~~~~~--~ipvIa~GGI~~ 234 (351)
T 2c6q_A 198 TRKKTGVGYPQLSAVMECADAAHGL--KGHIISDGGCSC 234 (351)
T ss_dssp HHHHHCBCCCHHHHHHHHHHHHHHT--TCEEEEESCCCS
T ss_pred ccccCCCCccHHHHHHHHHHHHhhc--CCcEEEeCCCCC
Confidence 00 0111333344444444332 467889999983
No 185
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=83.21 E-value=5.5 Score=36.04 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=61.9
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCccc-CCCCC-------CHHHHhhcccCCCCCeeEEEeccC--cccchHHH--Hh
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFV-PNITI-------GPLVVDALRPVTDLPLDVHLMIVE--PEQRVPDF--IK 136 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FV-pN~tf-------gp~~I~~ir~~t~~plDvHLMV~~--P~~~i~~~--~~ 136 (246)
.....+-++.|.++|+++|=+ |+|+ |.-+| ..+.++.|++..+.++-+-+--.+ |+.....+ ..
T Consensus 23 ~~~k~~ia~~L~~aGv~~IEv----g~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~ 98 (320)
T 3dxi_A 23 SKIVDAYILAMNELPIDYLEV----GYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPII 98 (320)
T ss_dssp HHHHHHHHHHHHTTTCCEEEE----EECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGT
T ss_pred HHHHHHHHHHHHHhCCCEEEE----ecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhh
Confidence 344556678889999998543 4443 22222 257778887665665554432222 33333333 34
Q ss_pred cCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCC
Q 025927 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS 177 (246)
Q Consensus 137 agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp 177 (246)
+|+|.+.+.......+...+.++++|+.|+++...+.-.+|
T Consensus 99 ~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~ 139 (320)
T 3dxi_A 99 GLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFNVMYMSK 139 (320)
T ss_dssp TTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred cCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEEEEeCCC
Confidence 79998776654211234556777789999999888843333
No 186
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=83.20 E-value=1.8 Score=39.06 Aligned_cols=85 Identities=21% Similarity=0.257 Sum_probs=52.7
Q ss_pred cEEeeeec---ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCC-C----CCCHHHHhhcccCCCCCeeEEEeccCccc
Q 025927 58 IIVSPSIL---SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN-I----TIGPLVVDALRPVTDLPLDVHLMIVEPEQ 129 (246)
Q Consensus 58 ~~IsPSIl---~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN-~----tfgp~~I~~ir~~t~~plDvHLMV~~P~~ 129 (246)
++|+|.=+ ..+.....+-++.|+++|+|+||+-- |.+.+. . .+..+.++.+|+.+++|+-+==-+.+|+.
T Consensus 214 vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~--~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~ 291 (338)
T 1z41_A 214 VRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS--GALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSM 291 (338)
T ss_dssp EEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC--CCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHH
T ss_pred EEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEec--CccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHH
Confidence 46777422 12344566778889999999999853 332211 1 23457788888876666543223345555
Q ss_pred chHHHHhcC-CCEEEEc
Q 025927 130 RVPDFIKAG-ADIVSVH 145 (246)
Q Consensus 130 ~i~~~~~ag-ad~It~H 145 (246)
.+++.+.| ||.|.+=
T Consensus 292 -a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 292 -AEEILQNGRADLIFIG 307 (338)
T ss_dssp -HHHHHHTTSCSEEEEC
T ss_pred -HHHHHHcCCceEEeec
Confidence 44566667 9999884
No 187
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=83.19 E-value=6.3 Score=35.77 Aligned_cols=142 Identities=13% Similarity=0.164 Sum_probs=90.4
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeecc---CcccCCCCCCHHHHhhcccCCCCCeeEEEecc-------CcccchHHHHh
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMD---GRFVPNITIGPLVVDALRPVTDLPLDVHLMIV-------EPEQRVPDFIK 136 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMD---G~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~-------~P~~~i~~~~~ 136 (246)
.-+..+.++..++.++|+..+|+-+-| |.=..+...--++++.||+.++. -+.+-+. .|+.-+....+
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d~--iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 29 VTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSDV--VINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCCC--EEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCCe--EEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 445688888899999999999999987 55333333335678888887653 3444333 34333444445
Q ss_pred cCCCEEEEccCCc---------------------------------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHH
Q 025927 137 AGADIVSVHCEQS---------------------------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC 183 (246)
Q Consensus 137 agad~It~H~E~~---------------------------------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~ 183 (246)
..+|+.++-.=+. +...+.++++.++++|+|+=+-+=----+..+..
T Consensus 107 ~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~ 186 (314)
T 3lot_A 107 LKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELECYDIGQIYNTAF 186 (314)
T ss_dssp HCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEECSHHHHHHHHH
T ss_pred cCCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHH
Confidence 5677777655110 1234778899999999999888763334555656
Q ss_pred hhhh------cceEEEEeecCCCCCCcccHHHHHHH
Q 025927 184 VLDV------VDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 184 ~l~~------vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
|++. .-+-+||.| + +|++-.|+.+.-.
T Consensus 187 l~~~Gll~~p~~~~~VlGv-~--~G~~~~p~~L~~~ 219 (314)
T 3lot_A 187 MFHEGYLEPPLRLQFIHGI-L--GGIGTAVEDVLFM 219 (314)
T ss_dssp HHHTTCSCSSEEEEEEECC-B--TSCCCCHHHHHHH
T ss_pred HHHCCCCCCCceEEEEecC-C--CCCCCCHHHHHHH
Confidence 5543 334556777 2 4666677666544
No 188
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=83.14 E-value=4.3 Score=38.72 Aligned_cols=67 Identities=24% Similarity=0.198 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEEEE
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
..+.++++.++|+|.+++|...|+. ..-.+.++++|+.. +.|+-+ =-+..+ ...+.+.++|+|.|.+
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~~----~~~~~~i~~ir~~~p~~~Vi~-g~v~t~-e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGHS----EGVLQRIRETRAAYPHLEIIG-GNVATA-EGARALIEAGVSAVKV 299 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTS----HHHHHHHHHHHHHCTTCCEEE-EEECSH-HHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHhccCceEEeccccccc----hHHHHHHHHHHHHCCCceEEE-cccCcH-HHHHHHHHhCCCEEEE
Confidence 3566788888999999999998754 22247888888754 666644 123344 4567889999999997
No 189
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=83.13 E-value=6.2 Score=35.40 Aligned_cols=147 Identities=13% Similarity=0.102 Sum_probs=88.8
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcc-----cchHHHHhcCCCEEE
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE-----QRVPDFIKAGADIVS 143 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~-----~~i~~~~~agad~It 143 (246)
..++.+.+++|...+.|. ++|.||.--..-.-.......|+ .++++.-.||-+.+-. .++..+.++|++.|-
T Consensus 28 ~~~l~~~~~~L~~~~pd~--vsVT~~~~g~~r~~t~~~a~~i~-~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niL 104 (310)
T 3apt_A 28 EEALFRTLEELKAFRPAF--VSITYGAMGSTRERSVAWAQRIQ-SLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLL 104 (310)
T ss_dssp HHHHHHHHHHHGGGCCSE--EEECCCSTTCSHHHHHHHHHHHH-HTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHhcCCCCE--EEEecCCCCCcchhHHHHHHHHH-HhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 456788899998878887 67777643211111233556667 5789999999987633 356666778987554
Q ss_pred E--------------ccCCcccccHHHHHHHHHHc-C--CcEEEEEcCCC-----Ch-HHHHHhhhhcce-EEEEeecCC
Q 025927 144 V--------------HCEQSSTIHLHRTLNQIKDL-G--AKAGVVLNPAT-----SL-SAIECVLDVVDL-VLIMSVNPG 199 (246)
Q Consensus 144 ~--------------H~E~~~~~~~~~~i~~Ik~~-G--~k~GlAlnP~T-----pv-e~l~~~l~~vD~-VLvMsV~PG 199 (246)
. |.+. ..+...+++.||+. | ..+|+|.+|+. +. .++..+..++|. .-..-.++.
T Consensus 105 aLrGD~p~~~g~~~~~~~~--f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iTQ~f 182 (310)
T 3apt_A 105 ALRGDPPRGERVFRPHPEG--FRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLDFAITQLF 182 (310)
T ss_dssp EECCCCSTTCCSCCCCTTS--CSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCSEEEECCC
T ss_pred EEcCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeccc
Confidence 2 1111 23577888989987 6 79999999952 23 345555555432 112223454
Q ss_pred CCCCcccHHHHHHHHHHHHHHHhcCCCCe
Q 025927 200 FGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 200 fgGQ~F~~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
| +.+.+. ++.+.+.+.|.+..
T Consensus 183 f-----D~~~~~---~f~~~~r~~Gi~vP 203 (310)
T 3apt_A 183 F-----NNAHYF---GFLERARRAGIGIP 203 (310)
T ss_dssp S-----CHHHHH---HHHHHHHHTTCCSC
T ss_pred C-----CHHHHH---HHHHHHHHcCCCCe
Confidence 4 444443 44445556665543
No 190
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=82.93 E-value=7.8 Score=34.97 Aligned_cols=141 Identities=11% Similarity=0.072 Sum_probs=82.1
Q ss_pred hhHHHHHH-HHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC----CCCC-eeEEEeccCcccchHHHHhcCCCEEE
Q 025927 70 AKLGEQVK-AVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV----TDLP-LDVHLMIVEPEQRVPDFIKAGADIVS 143 (246)
Q Consensus 70 ~~l~~~i~-~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~----t~~p-lDvHLMV~~P~~~i~~~~~agad~It 143 (246)
..--+-++ .|.++|+++|-+ |.|+.+ .-..+.++++++. ..++ ..+-.++.+. +.++...++|++.|.
T Consensus 41 ~~k~~i~~~~L~~~Gv~~IE~----g~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~-~~i~~a~~~g~~~v~ 114 (337)
T 3ble_A 41 SEKLNIAKFLLQKLNVDRVEI----ASARVS-KGELETVQKIMEWAATEQLTERIEILGFVDGN-KTVDWIKDSGAKVLN 114 (337)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE----EETTSC-TTHHHHHHHHHHHHHHTTCGGGEEEEEESSTT-HHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEE----eCCCCC-hhHHHHHHHHHhhhhhhccCCCCeEEEEccch-hhHHHHHHCCCCEEE
Confidence 34445567 888899998776 666542 0112677777651 0122 1222334333 378888999999888
Q ss_pred EccCCcc--------------cccHHHHHHHHHHcCCcEEEEEcC-----CCChHHHHHhhhh-----cceEEEEeecCC
Q 025927 144 VHCEQSS--------------TIHLHRTLNQIKDLGAKAGVVLNP-----ATSLSAIECVLDV-----VDLVLIMSVNPG 199 (246)
Q Consensus 144 ~H~E~~~--------------~~~~~~~i~~Ik~~G~k~GlAlnP-----~Tpve~l~~~l~~-----vD~VLvMsV~PG 199 (246)
+-.-+.. .+...+.++++|+.|.++-+.+.. .++.+.+.+++.. +|.|-+- .
T Consensus 115 i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~----D 190 (337)
T 3ble_A 115 LLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLP----D 190 (337)
T ss_dssp EEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEE----C
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEe----c
Confidence 7653210 124557788889999998877643 2455655555442 5655443 1
Q ss_pred CCCCcccHHHHHHHHHHHHHH
Q 025927 200 FGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 200 fgGQ~F~~~~l~KI~~lr~l~ 220 (246)
-.|-..=.++.+.++.+++..
T Consensus 191 T~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 191 TLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp TTCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHHHHhc
Confidence 223333345566667776665
No 191
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=82.74 E-value=12 Score=33.33 Aligned_cols=143 Identities=13% Similarity=0.129 Sum_probs=88.5
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeecc--CcccCCCCCCHHHHhhcccCC-CCCeeEEE--eccCcccchHHHHhcCCCE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMD--GRFVPNITIGPLVVDALRPVT-DLPLDVHL--MIVEPEQRVPDFIKAGADI 141 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMD--G~FVpN~tfgp~~I~~ir~~t-~~plDvHL--MV~~P~~~i~~~~~agad~ 141 (246)
.-+..+.++..++.++|+..+|+-+-| |.=..+...--++++.||+.+ ++.+-+=- ....++.. ....+..+|+
T Consensus 27 vTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R-~~~~~~~Pe~ 105 (275)
T 3no5_A 27 ITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNER-GAMLSLRPDM 105 (275)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGG-GTTGGGCCSE
T ss_pred CCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHH-hhHhhcCCCE
Confidence 445788899999999999999999997 542222223346777788754 44322110 11122222 2234456787
Q ss_pred EEEccCCc---------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh------cceEEEEeecCCCCCCccc
Q 025927 142 VSVHCEQS---------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV------VDLVLIMSVNPGFGGQSFI 206 (246)
Q Consensus 142 It~H~E~~---------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~------vD~VLvMsV~PGfgGQ~F~ 206 (246)
.++-.-+. +...+.++++.++++|+|+=+-+--..-+..+..|++. +-+-+||.+ | +|++-.
T Consensus 106 aSl~~gs~Nf~~~v~~N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vlGv-~--~g~~~~ 182 (275)
T 3no5_A 106 ASLATGSVNFPTRVYDNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAAGAIVGPLHIQFVMGI-K--NAMPVD 182 (275)
T ss_dssp EEEECSCEECSSSEECCCHHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHHTSSCSSCEEEEEECC-T--TSCCCC
T ss_pred EEecCcccccccccccCCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHCCCCCCCeeEEEEeCC-C--CCCCCC
Confidence 77433210 12457788999999999999988755566666666643 334556766 3 477777
Q ss_pred HHHHHHH
Q 025927 207 ESQVKKI 213 (246)
Q Consensus 207 ~~~l~KI 213 (246)
++.+.-.
T Consensus 183 ~~~l~~~ 189 (275)
T 3no5_A 183 REVLEFY 189 (275)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666544
No 192
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=82.52 E-value=2.4 Score=37.20 Aligned_cols=77 Identities=13% Similarity=0.156 Sum_probs=41.2
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCC-CCeeEEEec--cCcccchHHHHhcCCCEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTD-LPLDVHLMI--VEPEQRVPDFIKAGADIVS 143 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~-~plDvHLMV--~~P~~~i~~~~~agad~It 143 (246)
.|+..+.+-++++.+.|+|.+-+==+=|.-.|+..+ +.+++|++..+ .|+.+|.-- --+..-.-.-+++|++.|-
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~--~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd 229 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVA--AMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFD 229 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHH--HHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHH--HHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEE
Confidence 466777777777777888877665344443333221 34555555444 667777621 1111112233556777655
Q ss_pred Ec
Q 025927 144 VH 145 (246)
Q Consensus 144 ~H 145 (246)
.=
T Consensus 230 ~s 231 (295)
T 1ydn_A 230 AS 231 (295)
T ss_dssp EB
T ss_pred ec
Confidence 43
No 193
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=82.48 E-value=13 Score=32.34 Aligned_cols=124 Identities=8% Similarity=0.015 Sum_probs=79.3
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
.+-.=++..|+. +.++.+.++|+|++++=..... .+ .+.++.+|+. +...=+=|--..|...++.+.+ +
T Consensus 88 ~ldvHLmv~~p~---~~i~~~~~aGAd~itvH~Ea~~---~~---~~~i~~ir~~-G~k~Gvalnp~Tp~e~l~~~l~-~ 156 (246)
T 3inp_A 88 GMDVHLMVKPVD---ALIESFAKAGATSIVFHPEASE---HI---DRSLQLIKSF-GIQAGLALNPATGIDCLKYVES-N 156 (246)
T ss_dssp CEEEEEECSSCH---HHHHHHHHHTCSEEEECGGGCS---CH---HHHHHHHHTT-TSEEEEEECTTCCSGGGTTTGG-G
T ss_pred eEEEEEeeCCHH---HHHHHHHHcCCCEEEEccccch---hH---HHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHh-c
Confidence 345556666664 4577788899999999665532 11 5688888875 5544444555577777777766 6
Q ss_pred CCEEEEc-cCC-cc--------cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEE
Q 025927 139 ADIVSVH-CEQ-SS--------TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 139 ad~It~H-~E~-~~--------~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLv 193 (246)
+|+|.+. ++. +. .+.+.++-+.+.+.|..+=+.+..+-..+.+..+.+. +|.+.+
T Consensus 157 vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~ 222 (246)
T 3inp_A 157 IDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVA 222 (246)
T ss_dssp CSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEE
T ss_pred CCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 8988652 221 11 1122333333445577777888888888888888765 887665
No 194
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=82.44 E-value=2 Score=39.67 Aligned_cols=122 Identities=15% Similarity=0.102 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCccc-----CC---------------CCCCHHHHhhcccCCCC-CeeEEEeccC---
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFV-----PN---------------ITIGPLVVDALRPVTDL-PLDVHLMIVE--- 126 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN---------------~tfgp~~I~~ir~~t~~-plDvHLMV~~--- 126 (246)
.+.+..+++.++|.|.+++..--|... |+ .-|--++++++|+..+- |+-+-|-..+
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 445556667789999999987654221 21 12446778888885432 6666663321
Q ss_pred ----------cccchHHHHhcCCCEEEEccCCcc---cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--cceE
Q 025927 127 ----------PEQRVPDFIKAGADIVSVHCEQSS---TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLV 191 (246)
Q Consensus 127 ----------P~~~i~~~~~agad~It~H~E~~~---~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~--vD~V 191 (246)
...+++.+.++|+|+|++|.-... ......++..+|+.= +.=|..+-+-..+..+++|.. +|+|
T Consensus 247 ~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~-~iPvi~~Ggi~~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRF-KGGLIYCGNYDAGRAQARLDDNTADAV 325 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHCCCceEE
Confidence 223466777899999999963110 001234567777653 233555555558888888875 8987
Q ss_pred EE
Q 025927 192 LI 193 (246)
Q Consensus 192 Lv 193 (246)
.+
T Consensus 326 ~i 327 (377)
T 2r14_A 326 AF 327 (377)
T ss_dssp EE
T ss_pred ee
Confidence 66
No 195
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=82.20 E-value=11 Score=33.65 Aligned_cols=144 Identities=9% Similarity=0.007 Sum_probs=92.0
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeecc--CcccCCCCCCHHHHhhcccCC-CCCeeEEEe--ccCcccchHHHHhcCCC
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMD--GRFVPNITIGPLVVDALRPVT-DLPLDVHLM--IVEPEQRVPDFIKAGAD 140 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMD--G~FVpN~tfgp~~I~~ir~~t-~~plDvHLM--V~~P~~~i~~~~~agad 140 (246)
..-+.++.++..++.++|+..+|+-+-| |.-..+...--++++.||+.+ ++.+-+-.= ...|+.-+..+ +...|
T Consensus 30 PvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~Pe 108 (284)
T 3chv_A 30 PITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKPD 108 (284)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCCC
Confidence 3456788899999999999999999998 543333333346777788753 554333211 11455444444 56788
Q ss_pred EEEEccCCc---------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh------cceEEEEeecCCCCCCcc
Q 025927 141 IVSVHCEQS---------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV------VDLVLIMSVNPGFGGQSF 205 (246)
Q Consensus 141 ~It~H~E~~---------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~------vD~VLvMsV~PGfgGQ~F 205 (246)
+.|+-.=+. +...+.++++.++++|+++-+-+---.-+..+..|++. .-+-+||.+ | +|++-
T Consensus 109 ~aSl~~Gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~Gll~~p~~~~~vlGv-~--~g~~~ 185 (284)
T 3chv_A 109 MASLSVGSNNFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAFDLSHILRAIDMHGRGLLYGKLYVQFVMGV-K--NAMPA 185 (284)
T ss_dssp EEEECCSCEECSSSEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHTTCSCSSCEEEEEECC-T--TSCCC
T ss_pred EEEecCcccccCCccccCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHHHHHcCCCCCCceEEEEEec-C--CCCCC
Confidence 888766211 13457899999999999999888754455555555543 344566775 3 35666
Q ss_pred cHHHHHHH
Q 025927 206 IESQVKKI 213 (246)
Q Consensus 206 ~~~~l~KI 213 (246)
.++.+.-.
T Consensus 186 ~~~~L~~~ 193 (284)
T 3chv_A 186 DREVFDFY 193 (284)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 66666543
No 196
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=82.11 E-value=16 Score=35.07 Aligned_cols=130 Identities=17% Similarity=0.178 Sum_probs=78.5
Q ss_pred eeec-ccChhhHHHHHHHHHHcCCCE--EEeeecc-C--------cc------------------------c---CCCCC
Q 025927 62 PSIL-SANFAKLGEQVKAVELAGCDW--IHVDVMD-G--------RF------------------------V---PNITI 102 (246)
Q Consensus 62 PSIl-~aD~~~l~~~i~~l~~~g~d~--lHiDIMD-G--------~F------------------------V---pN~tf 102 (246)
.-|+ ..|...+++.+++++++|++. ||+|.-= | .| + .+-.+
T Consensus 251 ~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~ 330 (511)
T 1kbi_A 251 YQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSL 330 (511)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTC
T ss_pred EEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHh
Confidence 3444 677788889999999999994 7777210 1 00 0 01235
Q ss_pred CHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEE--ccCCc--ccccHHHHHHHHHHc----C--CcEEEEE
Q 025927 103 GPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV--HCEQS--STIHLHRTLNQIKDL----G--AKAGVVL 172 (246)
Q Consensus 103 gp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~--H~E~~--~~~~~~~~i~~Ik~~----G--~k~GlAl 172 (246)
..+.|++||+.+++|+-+-. +.+++ ....+.++|+|.|++ |--.. ........+..+++. + -++=|..
T Consensus 331 ~~~~i~~lr~~~~~PvivKg-v~~~e-~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia 408 (511)
T 1kbi_A 331 TWKDIEELKKKTKLPIVIKG-VQRTE-DVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFV 408 (511)
T ss_dssp CHHHHHHHHHHCSSCEEEEE-ECSHH-HHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEE
T ss_pred HHHHHHHHHHHhCCcEEEEe-CCCHH-HHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEE
Confidence 57889999998899988874 44554 366788999999999 42210 011123344444432 1 2344555
Q ss_pred cCC--CChHHHHHhhhhcceEEE
Q 025927 173 NPA--TSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 173 nP~--Tpve~l~~~l~~vD~VLv 193 (246)
+-+ |+.+.++-+.--+|.|.+
T Consensus 409 ~GGI~~g~Dv~kaLalGAdaV~i 431 (511)
T 1kbi_A 409 DGGVRRGTDVLKALCLGAKGVGL 431 (511)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEE
T ss_pred ECCCCCHHHHHHHHHcCCCEEEE
Confidence 544 444444444444888877
No 197
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=81.77 E-value=2.6 Score=38.54 Aligned_cols=72 Identities=13% Similarity=0.070 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC-CCEEEEcc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG-ADIVSVHC 146 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag-ad~It~H~ 146 (246)
...+-++.|+++|+|+||+-.. .+........+.++.+|+.+++|+-+==-+ +|+... .+.+.| ||.|.+=-
T Consensus 252 ~~~~~a~~l~~~G~d~i~v~~~--~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~-~~l~~g~aD~V~~gR 324 (364)
T 1vyr_A 252 DALYLIEELAKRGIAYLHMSET--DLAGGKPYSEAFRQKVRERFHGVIIGAGAY-TAEKAE-DLIGKGLIDAVAFGR 324 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC--BTTBCCCCCHHHHHHHHHHCCSEEEEESSC-CHHHHH-HHHHTTSCSEEEESH
T ss_pred HHHHHHHHHHHhCCCEEEEecC--cccCCCcccHHHHHHHHHHCCCCEEEECCc-CHHHHH-HHHHCCCccEEEECH
Confidence 3445578999999999998642 222112245678888998877775443233 566654 445555 99999843
No 198
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=81.65 E-value=4.5 Score=33.96 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC----CCCCeeEE---Eecc-------CcccchHHHHhcCC
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV----TDLPLDVH---LMIV-------EPEQRVPDFIKAGA 139 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~----t~~plDvH---LMV~-------~P~~~i~~~~~aga 139 (246)
++++.+.++|+|.+|+....- +| |+.+.++.+. ..+.+|++ +.+. +|..+++.+.++|+
T Consensus 88 ~~~~~~l~~Gad~V~lg~~~l---~~----p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~ 160 (244)
T 1vzw_A 88 DTLAAALATGCTRVNLGTAAL---ET----PEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGC 160 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHH---HC----HHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECchHh---hC----HHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCC
Confidence 458888889999999876542 22 4455544332 12346665 3332 56777788889999
Q ss_pred CEEEEccCCc----ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh----cceEEEEe
Q 025927 140 DIVSVHCEQS----STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV----VDLVLIMS 195 (246)
Q Consensus 140 d~It~H~E~~----~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~----vD~VLvMs 195 (246)
+.|.+|--.- ...+ ...++++++.--..=+|..-=++.+.+..++.. +|.|++-+
T Consensus 161 ~~i~~~~~~~~~~~~g~~-~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 161 ARYVVTDIAKDGTLQGPN-LELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp CCEEEEEC-------CCC-HHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred CEEEEeccCcccccCCCC-HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 9999985210 0112 356677775432233444433567999998865 88887754
No 199
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=81.53 E-value=14 Score=30.22 Aligned_cols=129 Identities=16% Similarity=0.128 Sum_probs=71.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
++++.+.++|+|.+|+.- ..+++++..++. +.+ +.+-+.+|+... ...+.|+|+|.++.-. ...
T Consensus 71 ~~i~~a~~~Gad~V~~~~----------~~~~~~~~~~~~-g~~--~~~g~~t~~e~~-~a~~~G~d~v~v~~t~--~~g 134 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN----------IHSEVIRRAVGY-GMT--VCPGCATATEAF-TALEAGAQALKIFPSS--AFG 134 (212)
T ss_dssp HHHHHHHHTTCCEEECSS----------CCHHHHHHHHHT-TCE--EECEECSHHHHH-HHHHTTCSEEEETTHH--HHC
T ss_pred HHHHHHHHcCCCEEEeCC----------CCHHHHHHHHHc-CCC--EEeecCCHHHHH-HHHHCCCCEEEEecCC--CCC
Confidence 578888999999999432 235667766554 333 222366777654 4467899999985421 112
Q ss_pred HHHHHHHHHHcCC-cEEEEEcCCCChHHHHHhhhh-cceEEEEeecCCCCCCcccHHHHHHHHHHHHHHH
Q 025927 154 LHRTLNQIKDLGA-KAGVVLNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCL 221 (246)
Q Consensus 154 ~~~~i~~Ik~~G~-k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~ 221 (246)
+ ..++.+++.-- .+=+...-+-..+.+..++.. +|.|.+.+---.-.| . .++.-++++++++.+.
T Consensus 135 ~-~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~Ga~gv~vGsai~~~~~-~-~~d~~~~~~~l~~~~~ 201 (212)
T 2v82_A 135 P-QYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQ-S-VERTAQQAAAFVKAYR 201 (212)
T ss_dssp H-HHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHTCSEEEECTTTCCTTC-C-HHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcCCCEEEEChHHhCCCC-C-HHHHHHHHHHHHHHHH
Confidence 2 34555554321 122222223346777777765 898888653211111 1 1234455666655543
No 200
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=81.51 E-value=4 Score=35.29 Aligned_cols=132 Identities=15% Similarity=0.186 Sum_probs=84.2
Q ss_pred cccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccc----------hHHHHhcCCCE-EEEccC--CcccccHHHHHHHH
Q 025927 95 RFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQR----------VPDFIKAGADI-VSVHCE--QSSTIHLHRTLNQI 161 (246)
Q Consensus 95 ~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~----------i~~~~~agad~-It~H~E--~~~~~~~~~~i~~I 161 (246)
.|.|.+. .+..+++.+++| +-.+|-..+ +..+.++||++ +..|.| .. ..++.+.++..
T Consensus 40 ~~~p~~~----~L~~v~~~~~i~----v~aQdv~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~-~~e~~~k~~~A 110 (226)
T 1w0m_A 40 VVAPNHL----ELGLVSQSVDIP----VYAQGADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLK-LNDLARLVAKA 110 (226)
T ss_dssp EEECCGG----GHHHHHTTCSSC----BEESCCSBSSCSSCTTCCBHHHHHHHTCCEEEECCTTSCCB-HHHHHHHHHHH
T ss_pred EEeCCHH----HHHHHHHhcCCc----eEeeECChhhCCCccCCCCHHHHHHcCCCEEEEeeeeccCC-HHHHHHHHHHH
Confidence 3555544 466666655444 445554444 77889999996 556877 32 23477888889
Q ss_pred HHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCCC---CC---CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC
Q 025927 162 KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF---GG---QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV 235 (246)
Q Consensus 162 k~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PGf---gG---Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI 235 (246)
+++|+.+=+-+.-....+.+ ..++- .+..+||-+ .| +.|.++.++...++.+...+ +..|.-=|||
T Consensus 111 ~~~GL~~ivcVge~~e~~~~----~~~~~-~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~---~~~ilyggsV 182 (226)
T 1w0m_A 111 KSLGLDVVVCAPDPRTSLAA----AALGP-HAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFP---EVSVITGAGI 182 (226)
T ss_dssp HHTTCEEEEEESSHHHHHHH----HHTCC-SEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCT---TSEEEEESSC
T ss_pred HHCCCEEEEEeCCHHHHHHH----hcCCC-CEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhccC---CCEEEEeCCC
Confidence 99999988777643333222 22332 388999943 45 67888866655554433332 4678889999
Q ss_pred Chhhhhhc
Q 025927 236 GPKNAYKV 243 (246)
Q Consensus 236 ~~e~i~~l 243 (246)
+..|..++
T Consensus 183 ~~~n~~~~ 190 (226)
T 1w0m_A 183 ESGDDVAA 190 (226)
T ss_dssp CSHHHHHH
T ss_pred CcHHHHHH
Confidence 98887654
No 201
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=81.49 E-value=8.8 Score=34.74 Aligned_cols=143 Identities=13% Similarity=0.131 Sum_probs=90.3
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeecc---CcccCCCCCCHHHHhhcccCCCCCeeEEEecc-----CcccchHHHHhcC
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMD---GRFVPNITIGPLVVDALRPVTDLPLDVHLMIV-----EPEQRVPDFIKAG 138 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMD---G~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~-----~P~~~i~~~~~ag 138 (246)
.-+..+.++..++.++|+..+|+-+-| |.=..+...--++++.||+.++ +-+.+-+. .|+.-+..+.+..
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d--~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 29 VTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTD--AVINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCC--CEEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC--cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 345788888999999999999999988 5533332222357788888664 33444332 3444344444446
Q ss_pred CCEEEEccCCc---------------------------------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh
Q 025927 139 ADIVSVHCEQS---------------------------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL 185 (246)
Q Consensus 139 ad~It~H~E~~---------------------------------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l 185 (246)
+|+.++-.-+. +...+.++++.++++|+|+=+-+---.-+..+..|+
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e49_A 107 PELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFECYDTSHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEEECHHHHHHHHHHH
Confidence 77766652210 112477889999999999998887444555566666
Q ss_pred hh------cceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 186 DV------VDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 186 ~~------vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
+. +-+-+||.+. +|++-.++.+.-..
T Consensus 187 ~~Gl~~~p~~~~~vlGv~---~g~~~~~~~L~~~~ 218 (311)
T 3e49_A 187 DRKLATPPFFVQTVFGLL---GGIGPHPEDLAHMR 218 (311)
T ss_dssp HTTCSCSSEEEEEEESCT---TSCCCCHHHHHHHH
T ss_pred HcCCCCCCeEEEEEecCC---CCCCCCHHHHHHHH
Confidence 53 3344556653 57777777776543
No 202
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=81.36 E-value=7.4 Score=37.85 Aligned_cols=99 Identities=19% Similarity=0.233 Sum_probs=56.4
Q ss_pred cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEE
Q 025927 65 LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIV 142 (246)
Q Consensus 65 l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~I 142 (246)
...|+...-+..+++.+.|+|.|=+- ++...++.---=.+++..+++.++.|+- +-+.+|+. ++.-.++ |+++|
T Consensus 335 ~~~~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~~~vpis--IDT~~~~v-~eaal~~~~G~~iI 410 (566)
T 1q7z_A 335 QKGNEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYVSNVPLS--LDIQNVDL-TERALRAYPGRSLF 410 (566)
T ss_dssp HTTCCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHHTCSCEE--EECCCHHH-HHHHHHHCSSCCEE
T ss_pred hcCCHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhhCCceEE--EeCCCHHH-HHHHHHhcCCCCEE
Confidence 34467777778888889999998776 2222221100001234444444455542 23446554 4444566 99987
Q ss_pred -EEccCCcccccHHHHHHHHHHcCCcEEE
Q 025927 143 -SVHCEQSSTIHLHRTLNQIKDLGAKAGV 170 (246)
Q Consensus 143 -t~H~E~~~~~~~~~~i~~Ik~~G~k~Gl 170 (246)
.+-.+ .+.+.+++..++++|+.+-+
T Consensus 411 Ndis~~---~~~~~~~~~~~~~~g~~vV~ 436 (566)
T 1q7z_A 411 NSAKVD---EEELEMKINLLKKYGGTLIV 436 (566)
T ss_dssp EEEESC---HHHHHHHHHHHHHHCCEEEE
T ss_pred EECCcc---hhhHHHHHHHHHHhCCeEEE
Confidence 44444 23345788888999875433
No 203
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=80.42 E-value=5.4 Score=33.92 Aligned_cols=128 Identities=13% Similarity=0.096 Sum_probs=70.4
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
.+-.-+|..|+. +.++.+.++|+|++|+=.. ++.+ ..-.+.++.+++. +..+=+=+-..+|...++.+.+ +
T Consensus 64 ~~~vhlmv~dp~---~~i~~~~~aGadgv~vh~e--~~~~--~~~~~~~~~i~~~-g~~~gv~~~p~t~~e~~~~~~~-~ 134 (230)
T 1tqj_A 64 TLDVHLMIVEPE---KYVEDFAKAGADIISVHVE--HNAS--PHLHRTLCQIREL-GKKAGAVLNPSTPLDFLEYVLP-V 134 (230)
T ss_dssp EEEEEEESSSGG---GTHHHHHHHTCSEEEEECS--TTTC--TTHHHHHHHHHHT-TCEEEEEECTTCCGGGGTTTGG-G
T ss_pred cEEEEEEccCHH---HHHHHHHHcCCCEEEECcc--cccc--hhHHHHHHHHHHc-CCcEEEEEeCCCcHHHHHHHHh-c
Confidence 344445666763 4567778899999966422 1111 1234677777764 4433332222566666666555 8
Q ss_pred CCEE---EEccCCcc---cccHHHHHHHHH----HcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEe
Q 025927 139 ADIV---SVHCEQSS---TIHLHRTLNQIK----DLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMS 195 (246)
Q Consensus 139 ad~I---t~H~E~~~---~~~~~~~i~~Ik----~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMs 195 (246)
+|+| +++.-... .......++++| +.|....++.--+-..+.+..+.. -+|.+.+-|
T Consensus 135 ~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGS 202 (230)
T 1tqj_A 135 CDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGS 202 (230)
T ss_dssp CSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESH
T ss_pred CCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECH
Confidence 8998 33332100 111223334444 345556666666655677777766 589887754
No 204
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=80.30 E-value=2.2 Score=38.84 Aligned_cols=99 Identities=24% Similarity=0.354 Sum_probs=62.7
Q ss_pred cccchH---HHHhcCCCEEEEccCC-c-c-----cccHHHHHHHHHHcCCcEEEEEcCCCCh---------HHHHHhhh-
Q 025927 127 PEQRVP---DFIKAGADIVSVHCEQ-S-S-----TIHLHRTLNQIKDLGAKAGVVLNPATSL---------SAIECVLD- 186 (246)
Q Consensus 127 P~~~i~---~~~~agad~It~H~E~-~-~-----~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv---------e~l~~~l~- 186 (246)
|+..++ .+.++||..+++|+.. . . .+...+++..||+. +++.|++.|.- +.+..+..
T Consensus 31 peEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~---~d~iI~~TTgg~~~~~~~~eeR~~~~~~~ 107 (314)
T 3lot_A 31 PDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ---SDVVINVTTGGGGTLGIPVEERAKVVPAL 107 (314)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH---CCCEEEECSSTTGGGTCCHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc---CCeEEEeCCCCcCCCCCCHHHHHHHHHhc
Confidence 444444 4567899999999864 1 1 11356889999985 58899997742 11222211
Q ss_pred hcceEEEEeecCC---CC-----------------------CCcccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 187 VVDLVLIMSVNPG---FG-----------------------GQSFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 187 ~vD~VLvMsV~PG---fg-----------------------GQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
.-|+. |++.| |+ +...-.++.+.++++-+.+.++|..++||+
T Consensus 108 ~Pe~a---Sln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~ 175 (314)
T 3lot_A 108 KPEIA---TFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELEC 175 (314)
T ss_dssp CCSEE---EEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCcee---eecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 34655 66666 43 111223467778888888888888888876
No 205
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=80.30 E-value=7.1 Score=33.03 Aligned_cols=92 Identities=14% Similarity=0.075 Sum_probs=61.7
Q ss_pred CCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 100 ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 100 ~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
.+|.++.++.+|+. .++++- -|.-..|..+.+.+.+.|++.+..++... . .++++.+|++|+++-+.- .++ .
T Consensus 146 ~Sf~~~~l~~~~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~~v~~~~~~G~~v~~wT-vn~-~ 218 (247)
T 2otd_A 146 SSFEIDALEAAQQAAPELPRG-LLLDEWRDDWRELTARLGCVSIHLNHKLL---D-KARVMQLKDAGLRILVYT-VNK-P 218 (247)
T ss_dssp EESCHHHHHHHHHHCTTSCEE-EEESSCCTTHHHHHHHHTCSEEEEEGGGC---C-HHHHHHHHHTTCEEEEEC-CCC-H
T ss_pred EcCCHHHHHHHHHHCCCCCEE-EEecCCcccHHHHHHHcCCeEEecChHhC---C-HHHHHHHHHCCCEEEEEc-cCC-H
Confidence 47899999999874 444432 23333566666667778999999888742 2 367899999999887653 333 4
Q ss_pred HHHHHhhhh-cceEEEEeecCCC
Q 025927 179 SAIECVLDV-VDLVLIMSVNPGF 200 (246)
Q Consensus 179 e~l~~~l~~-vD~VLvMsV~PGf 200 (246)
+.+..+++. +|.| +|=.|..
T Consensus 219 ~~~~~l~~~GvdgI--~TD~p~~ 239 (247)
T 2otd_A 219 QHAAELLRWGVDCI--CTDAIDV 239 (247)
T ss_dssp HHHHHHHHHTCSEE--EESCTTT
T ss_pred HHHHHHHHcCCCEE--EeCCHHH
Confidence 666677665 7774 4555643
No 206
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=79.67 E-value=3.2 Score=37.60 Aligned_cols=86 Identities=22% Similarity=0.239 Sum_probs=52.6
Q ss_pred cEEeeeec---ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCC------CCCCHHHHhhcccCCCCCeeEEEeccCcc
Q 025927 58 IIVSPSIL---SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN------ITIGPLVVDALRPVTDLPLDVHLMIVEPE 128 (246)
Q Consensus 58 ~~IsPSIl---~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN------~tfgp~~I~~ir~~t~~plDvHLMV~~P~ 128 (246)
++|||.=+ ..+.....+-++.|+++|+|+||+-. |.+.+. -.+..+.++.+|+.+++|+-+==-+.+|+
T Consensus 224 vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e 301 (349)
T 3hgj_A 224 VRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS--GGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPE 301 (349)
T ss_dssp EEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC--CCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHH
T ss_pred EEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec--CCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHH
Confidence 46676421 12344556668889999999999864 322221 12456778888887666643221223455
Q ss_pred cchHHHHhcC-CCEEEEcc
Q 025927 129 QRVPDFIKAG-ADIVSVHC 146 (246)
Q Consensus 129 ~~i~~~~~ag-ad~It~H~ 146 (246)
. .+.+++.| +|.|.+=-
T Consensus 302 ~-a~~~l~~G~aD~V~iGR 319 (349)
T 3hgj_A 302 Q-AETLLQAGSADLVLLGR 319 (349)
T ss_dssp H-HHHHHHTTSCSEEEEST
T ss_pred H-HHHHHHCCCceEEEecH
Confidence 4 45666677 99999843
No 207
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=79.16 E-value=4.1 Score=36.68 Aligned_cols=150 Identities=15% Similarity=0.209 Sum_probs=81.4
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCC---CCCC------HHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN---ITIG------PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN---~tfg------p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
.|.....+..+++.+.|+|.|-+=-.-.. |+ .+-. .++|+++++.++.|+-+ =+.+|+- ++.-+++
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStr--Pga~~v~~~eE~~RvvpvI~~l~~~~~vpiSI--DT~~~~V-~~aAl~a 134 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTR--PGFAKVSVEEEIKRVVPMIQAVSKEVKLPISI--DTYKAEV-AKQAIEA 134 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEE--ECSCHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCC--CCCCCCCHHHHHHHHHHHHHHHHhcCCceEEE--eCCCHHH-HHHHHHc
Confidence 35566677788888999999866543311 22 1111 12335555545667554 3456665 4455667
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh---------HHHHHhhhh-----cc--eEEEEeecCCCC
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL---------SAIECVLDV-----VD--LVLIMSVNPGFG 201 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv---------e~l~~~l~~-----vD--~VLvMsV~PGfg 201 (246)
|+++| -.+-.. ..+ .+++..+++.|+.+-+.-+.++|- +.++..++. ++ . .-++||+|
T Consensus 135 Ga~iI-Ndvsg~-~~d-~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~---IilDPg~G 208 (297)
T 1tx2_A 135 GAHII-NDIWGA-KAE-PKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDEN---IILDPGIG 208 (297)
T ss_dssp TCCEE-EETTTT-SSC-THHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGG---EEEECCTT
T ss_pred CCCEE-EECCCC-CCC-HHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhc---EEEeCCCC
Confidence 99988 343321 112 256778889997777766655553 222222221 22 1 23468876
Q ss_pred CCcccHHHHHHHHHHHHHHHhcCCCCe
Q 025927 202 GQSFIESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 202 GQ~F~~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
--+=.+..++-++.++++.. .|+...
T Consensus 209 fgk~~~~n~~ll~~l~~l~~-lg~Pvl 234 (297)
T 1tx2_A 209 FAKTPEQNLEAMRNLEQLNV-LGYPVL 234 (297)
T ss_dssp SSCCHHHHHHHHHTGGGGGG-GCSCBE
T ss_pred cCCCHHHHHHHHHHHHHHHh-CCCCEE
Confidence 45545555666666665443 354433
No 208
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=79.12 E-value=11 Score=34.10 Aligned_cols=142 Identities=14% Similarity=0.154 Sum_probs=89.1
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeecc---CcccCCCCCCHHHHhhcccCCCCCeeEEEecc-----CcccchHHHHhcC
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMD---GRFVPNITIGPLVVDALRPVTDLPLDVHLMIV-----EPEQRVPDFIKAG 138 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMD---G~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~-----~P~~~i~~~~~ag 138 (246)
.-+..+.++..++.++|+..+|+-+-| |.=..+...--++++.||+.++ +-+.+-+. .|+.-+..+.+..
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d--~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 29 ITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTD--AILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCC--CEEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC--cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 345788888899999999999999988 5532222222356777787664 33444332 3444444444456
Q ss_pred CCEEEEccCCc---------------------------------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh
Q 025927 139 ADIVSVHCEQS---------------------------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL 185 (246)
Q Consensus 139 ad~It~H~E~~---------------------------------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l 185 (246)
+|+.++-.-+. +...+.++++.++++|+++=+-+---.-+..+..|+
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e02_A 107 PEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFECYDVGHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEEEcHHHHHHHHHHH
Confidence 77666542110 122478889999999999998887444555566666
Q ss_pred hh------cceEEEEeecCCCCCCcccHHHHHHH
Q 025927 186 DV------VDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 186 ~~------vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
+. +-+-+||.+. +|++-.++.+.-.
T Consensus 187 ~~Gl~~~p~~~~~vlGv~---~g~~~~~~~L~~~ 217 (311)
T 3e02_A 187 DRKLVEPPFFLQCVFGIL---GGIGADPENLLHM 217 (311)
T ss_dssp HTTSSCSCEEEEEEECCB---TSCCSCHHHHHHH
T ss_pred HcCCCCCCeEEEEEecCC---CCCCCCHHHHHHH
Confidence 53 3344566653 5677777776544
No 209
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=78.95 E-value=15 Score=37.03 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc----C----CCCCeeEEEeccCcc-cchHHHHhcC-CC
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP----V----TDLPLDVHLMIVEPE-QRVPDFIKAG-AD 140 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~----~----t~~plDvHLMV~~P~-~~i~~~~~ag-ad 140 (246)
-+.+.+++|.++|++|+.+| |-.++..+ +++.++.+++ . .+.++-+|..--+.. ..++.+.+.+ +|
T Consensus 187 ~y~~~l~~L~~aG~~~VQiD--EP~L~~~l--~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G~~~~~~~~~l~~l~~vd 262 (765)
T 1u1j_A 187 IYKEVITELKAAGATWIQLD--EPVLVMDL--EGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTLTSLKGVT 262 (765)
T ss_dssp HHHHHHHHHHHTTCCEEEEE--CGGGGSCC--CHHHHHHHHHHHHHSTTTTCSSEEEEECCSSCCCHHHHHHHTTCTTCC
T ss_pred HHHHHHHHHHHcCCCEEEEc--CCccccCC--CHHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCcchHHHHHHHcCCCCc
Confidence 34678889999999999988 54555444 4555544432 1 134445555544544 5567777777 77
Q ss_pred EEEEcc
Q 025927 141 IVSVHC 146 (246)
Q Consensus 141 ~It~H~ 146 (246)
.+++-+
T Consensus 263 ~l~lD~ 268 (765)
T 1u1j_A 263 AFGFDL 268 (765)
T ss_dssp EEEEES
T ss_pred EEEEEe
Confidence 776543
No 210
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=78.89 E-value=11 Score=30.63 Aligned_cols=99 Identities=20% Similarity=0.196 Sum_probs=60.1
Q ss_pred CCEEEEcc-CCccccc-HHHHHHHHHHcCCcEEEEEcCCC--ChHHHHHhhhhcceEEEEeecCCC-------CCCcccH
Q 025927 139 ADIVSVHC-EQSSTIH-LHRTLNQIKDLGAKAGVVLNPAT--SLSAIECVLDVVDLVLIMSVNPGF-------GGQSFIE 207 (246)
Q Consensus 139 ad~It~H~-E~~~~~~-~~~~i~~Ik~~G~k~GlAlnP~T--pve~l~~~l~~vD~VLvMsV~PGf-------gGQ~F~~ 207 (246)
...|.|.- |.+...+ +.++++.+++.|+++.+.-|... ..+.++.+++.+|. +.++++-+- .|..+ +
T Consensus 70 ~~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~~~~-v~isld~~~~~~~~~~~~~~~-~ 147 (245)
T 3c8f_A 70 GGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDL-VMLDLKQMNDEIHQNLVGVSN-H 147 (245)
T ss_dssp TCEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHTCSE-EEEECCCSSHHHHHHHHSSCS-H
T ss_pred CCeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHhCCE-EEEeCCCCCHHHhhhccCCCH-H
Confidence 46676653 3322223 46889999999999888888644 56778888887886 456665431 23344 5
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEE--EeCCCCh--hhhhhc
Q 025927 208 SQVKKISDLRRMCLEKGVNPWIE--VDGGVGP--KNAYKV 243 (246)
Q Consensus 208 ~~l~KI~~lr~l~~~~~~~~~I~--VDGGI~~--e~i~~l 243 (246)
.+++.|+.+++ .|..+.+. +-.|.+. +.+.++
T Consensus 148 ~~~~~i~~l~~----~g~~v~i~~~~~~g~~~~~~~~~~~ 183 (245)
T 3c8f_A 148 RTLEFAKYLAN----KNVKVWIRYVVVPGWSDDDDSAHRL 183 (245)
T ss_dssp HHHHHHHHHHH----HTCCEEEEEEECTTTTCCHHHHHHH
T ss_pred HHHHHHHHHHh----cCCEEEEEEeecCCCCCCHHHHHHH
Confidence 66666665554 35554444 4555542 444443
No 211
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=78.87 E-value=2.6 Score=38.23 Aligned_cols=99 Identities=22% Similarity=0.331 Sum_probs=62.2
Q ss_pred cccchH---HHHhcCCCEEEEccCC-c-c--cc---cHHHHHHHHHHcCCcEEEEEcCCCC-------hHHHHHhhh-hc
Q 025927 127 PEQRVP---DFIKAGADIVSVHCEQ-S-S--TI---HLHRTLNQIKDLGAKAGVVLNPATS-------LSAIECVLD-VV 188 (246)
Q Consensus 127 P~~~i~---~~~~agad~It~H~E~-~-~--~~---~~~~~i~~Ik~~G~k~GlAlnP~Tp-------ve~l~~~l~-~v 188 (246)
|+..++ .+.++||..+++|+.. . . .. ...+++..||+. +.+.|++.|. -+.+..+.. .-
T Consensus 31 peEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~---~d~iI~~TTgg~~~~~~eerla~~~~~~P 107 (311)
T 3e49_A 31 PDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSN---TDAVINLTTGGSPHMTVEERLRPATHYMP 107 (311)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHH---CCCEEEECSCSCTTSCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHh---CCcEEEECCCCCCCCCHHHHHHHHHhcCC
Confidence 444444 4567899999999864 1 1 11 255789999984 4567887765 133443322 45
Q ss_pred ceEEEEeecCC---CC-----------------------CCcccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 189 DLVLIMSVNPG---FG-----------------------GQSFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 189 D~VLvMsV~PG---fg-----------------------GQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
|+. |++.| |+ +....+++.+.++++-+.+.++|..+++++
T Consensus 108 e~a---Sln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~ 173 (311)
T 3e49_A 108 ELA---SLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFEC 173 (311)
T ss_dssp SEE---EEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred Cee---eecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEE
Confidence 666 56665 33 111223456678888888888888888876
No 212
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=78.79 E-value=4.6 Score=36.31 Aligned_cols=75 Identities=13% Similarity=0.245 Sum_probs=49.1
Q ss_pred cHHHHHHHHHHcC--CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeE
Q 025927 153 HLHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 153 ~~~~~i~~Ik~~G--~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I 229 (246)
.+...++..|+.+ .++.+ ..+| ++++++.+. -+|.|++=. |.++.++ ++.+... -+..|
T Consensus 184 ~i~~Av~~ar~~~~~~~IeV--Ev~t-l~ea~eAl~aGaD~I~LDn---------~~~~~l~---~av~~~~---~~v~i 245 (287)
T 3tqv_A 184 GIAKAVTKAKKLDSNKVVEV--EVTN-LDELNQAIAAKADIVMLDN---------FSGEDID---IAVSIAR---GKVAL 245 (287)
T ss_dssp CHHHHHHHHHHHCTTSCEEE--EESS-HHHHHHHHHTTCSEEEEES---------CCHHHHH---HHHHHHT---TTCEE
T ss_pred CHHHHHHHHHhhCCCCcEEE--EeCC-HHHHHHHHHcCCCEEEEcC---------CCHHHHH---HHHHhhc---CCceE
Confidence 4667778888765 45444 3344 366666554 499998843 4454444 3344433 25789
Q ss_pred EEeCCCChhhhhhccc
Q 025927 230 EVDGGVGPKNAYKVPN 245 (246)
Q Consensus 230 ~VDGGI~~e~i~~l~~ 245 (246)
++=||||++|++++.+
T Consensus 246 eaSGGIt~~~i~~~a~ 261 (287)
T 3tqv_A 246 EVSGNIDRNSIVAIAK 261 (287)
T ss_dssp EEESSCCTTTHHHHHT
T ss_pred EEECCCCHHHHHHHHH
Confidence 9999999999998764
No 213
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=78.71 E-value=6.2 Score=34.81 Aligned_cols=72 Identities=22% Similarity=0.209 Sum_probs=54.2
Q ss_pred HHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHH
Q 025927 78 AVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRT 157 (246)
Q Consensus 78 ~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~ 157 (246)
.+...|++.+|.+.- ...++.|+.+++. + +.||..+-|-..-++.+.+.|+|.|+ ++.|..+
T Consensus 240 ~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~-G--l~V~~WTVn~~~~~~~l~~~GVDgIi-------TD~P~~~ 301 (313)
T 3l12_A 240 AVASAGGQLWCPYFL--------DVTPELVAEAHDL-G--LIVLTWTVNEPEDIRRMATTGVDGIV-------TDYPGRT 301 (313)
T ss_dssp HHHHHTCSEEEEBGG--------GCCHHHHHHHHHT-T--CEEEEBCCCSHHHHHHHHHHTCSEEE-------ESCHHHH
T ss_pred HHHHhCCcEEecchh--------cCCHHHHHHHHHC-C--CEEEEEcCCCHHHHHHHHHcCCCEEE-------eCCHHHH
Confidence 445567899998742 3468899998864 4 46677777766677889999999988 3578888
Q ss_pred HHHHHHcCCc
Q 025927 158 LNQIKDLGAK 167 (246)
Q Consensus 158 i~~Ik~~G~k 167 (246)
.+.+++.|++
T Consensus 302 ~~~l~~~g~~ 311 (313)
T 3l12_A 302 QRILIDMGLS 311 (313)
T ss_dssp HHHHHHTTCB
T ss_pred HHHHHhcCcC
Confidence 8888888864
No 214
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=78.66 E-value=21 Score=29.75 Aligned_cols=127 Identities=13% Similarity=0.160 Sum_probs=75.5
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEE--EeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHh
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWI--HVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK 136 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~l--HiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ 136 (246)
.+-.-++..|.. +.++.+.++|+|++ |.+-.| ++. ...++.+++. ++.+=+-+-...|...++.+.+
T Consensus 66 ~~~v~lmv~d~~---~~i~~~~~agad~v~vH~~~~~-~~~------~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~ 134 (228)
T 1h1y_A 66 YLDCHLMVTNPS---DYVEPLAKAGASGFTFHIEVSR-DNW------QELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVE 134 (228)
T ss_dssp EEEEEEESSCGG---GGHHHHHHHTCSEEEEEGGGCT-TTH------HHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHH
T ss_pred cEEEEEEecCHH---HHHHHHHHcCCCEEEECCCCcc-cHH------HHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHh
Confidence 344456666653 34777777899999 655433 110 3568888765 5555555544667677777777
Q ss_pred c--CCCEEEE---ccCCcc---cccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEee
Q 025927 137 A--GADIVSV---HCEQSS---TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSV 196 (246)
Q Consensus 137 a--gad~It~---H~E~~~---~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV 196 (246)
. ++|+|.+ |.-... .....+-++++|+.--..=+.+..+-..+.+..++. -+|.+.+-|-
T Consensus 135 ~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsa 203 (228)
T 1h1y_A 135 AENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSS 203 (228)
T ss_dssp SSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHH
T ss_pred cCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEECHH
Confidence 6 9999988 321100 112334466666653233355555655577777766 5898877543
No 215
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=78.11 E-value=14 Score=35.04 Aligned_cols=80 Identities=26% Similarity=0.212 Sum_probs=53.3
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFI 135 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~ 135 (246)
+..+..++-. ..+..+.++.+.++|+|.+.+|...|+.- .-.+.++++|+.. +.|+-+ =-+..+ ...+.+.
T Consensus 217 rl~v~aavG~--~~~~~~~a~~l~~aG~d~I~id~a~g~~~----~~~~~v~~i~~~~p~~~Vi~-g~v~t~-e~a~~l~ 288 (490)
T 4avf_A 217 RLRVGAAVGT--GADTGERVAALVAAGVDVVVVDTAHGHSK----GVIERVRWVKQTFPDVQVIG-GNIATA-EAAKALA 288 (490)
T ss_dssp CBCCEEEECS--STTHHHHHHHHHHTTCSEEEEECSCCSBH----HHHHHHHHHHHHCTTSEEEE-EEECSH-HHHHHHH
T ss_pred cceeeeeecc--ccchHHHHHHHhhcccceEEecccCCcch----hHHHHHHHHHHHCCCceEEE-eeeCcH-HHHHHHH
Confidence 3444444433 23456778888999999999999887531 2246788888754 555443 123444 3467889
Q ss_pred hcCCCEEEE
Q 025927 136 KAGADIVSV 144 (246)
Q Consensus 136 ~agad~It~ 144 (246)
++|+|.|.+
T Consensus 289 ~aGaD~I~v 297 (490)
T 4avf_A 289 EAGADAVKV 297 (490)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999999998
No 216
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=77.89 E-value=2.7 Score=38.58 Aligned_cols=68 Identities=24% Similarity=0.239 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEcc
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~ 146 (246)
.+.++.+.++|+|.+|+|...|+. ..-.+.++++|+..+.|+-+. -+..++ ..+.+.++|+|.|.+..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~----~~~~~~i~~i~~~~~~~Vivg-~v~t~e-~A~~l~~aGaD~I~VG~ 174 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHS----LNIIRTLKEIKSKMNIDVIVG-NVVTEE-ATKELIENGADGIKVGI 174 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSB----HHHHHHHHHHHHHCCCEEEEE-EECSHH-HHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCc----HHHHHHHHHHHHhcCCcEEEc-cCCCHH-HHHHHHHcCcCEEEEec
Confidence 677888999999999999887642 111356777777556665442 234444 46788999999999853
No 217
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=77.82 E-value=7 Score=37.97 Aligned_cols=86 Identities=30% Similarity=0.380 Sum_probs=52.7
Q ss_pred cEEeeeec---ccChhhHHHHHHHHHHcCCCEEEeeeccCcc---cCCC------CCCHHHHhhcccCCCCCeeEEEecc
Q 025927 58 IIVSPSIL---SANFAKLGEQVKAVELAGCDWIHVDVMDGRF---VPNI------TIGPLVVDALRPVTDLPLDVHLMIV 125 (246)
Q Consensus 58 ~~IsPSIl---~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~F---VpN~------tfgp~~I~~ir~~t~~plDvHLMV~ 125 (246)
++|+|.-+ ..+.....+-++.|+++|+|++|+-. |.+ .|.. ....+.++.+|+.+++|+-+==-+.
T Consensus 213 vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~ 290 (671)
T 1ps9_A 213 YRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGI--GWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRIN 290 (671)
T ss_dssp EEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEE--CBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCC
T ss_pred EEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCC--CccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCC
Confidence 46777533 23444566678889999999999843 211 1211 1235678889988888853322233
Q ss_pred CcccchHHHHhcC-CCEEEEcc
Q 025927 126 EPEQRVPDFIKAG-ADIVSVHC 146 (246)
Q Consensus 126 ~P~~~i~~~~~ag-ad~It~H~ 146 (246)
+|+.. +.+.+.| +|.|.+=-
T Consensus 291 ~~~~a-~~~l~~g~aD~V~~gR 311 (671)
T 1ps9_A 291 DPQVA-DDILSRGDADMVSMAR 311 (671)
T ss_dssp SHHHH-HHHHHTTSCSEEEEST
T ss_pred CHHHH-HHHHHcCCCCEEEeCH
Confidence 55554 4555666 99999843
No 218
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=77.78 E-value=23 Score=29.39 Aligned_cols=129 Identities=10% Similarity=0.066 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC---CCCC---eeEEEe----cc--Ccc----------
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLP---LDVHLM----IV--EPE---------- 128 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~---t~~p---lDvHLM----V~--~P~---------- 128 (246)
.+.+.++.+.+.|.+.+-+-.-+.++...-.+.+..++++++. .++. +.+|.- .. +|.
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~ 92 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVELLK 92 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHHHHH
Confidence 5677888999999999888432222212223455566666542 4665 667731 11 222
Q ss_pred cchHHHHhcCCCEEEEccCCcc----cccHHHHHHHHHH-----cCCcEEEEEcCC------CChHHHHHhhhhcce--E
Q 025927 129 QRVPDFIKAGADIVSVHCEQSS----TIHLHRTLNQIKD-----LGAKAGVVLNPA------TSLSAIECVLDVVDL--V 191 (246)
Q Consensus 129 ~~i~~~~~agad~It~H~E~~~----~~~~~~~i~~Ik~-----~G~k~GlAlnP~------Tpve~l~~~l~~vD~--V 191 (246)
+.++...+.|+++|.+|.-... .....++.+.+++ .|++.++=-.+. ...+.+..+++.+|. =
T Consensus 93 ~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~~~~~~ 172 (287)
T 2x7v_A 93 KEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRDLVDQRDR 172 (287)
T ss_dssp HHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHHHHCSCGGG
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHHHhcCCCCC
Confidence 2344445579999999853210 1123344444443 355544433332 356778888888863 3
Q ss_pred EEEeecCC
Q 025927 192 LIMSVNPG 199 (246)
Q Consensus 192 LvMsV~PG 199 (246)
+=+..++|
T Consensus 173 vg~~~D~~ 180 (287)
T 2x7v_A 173 VAITYDTC 180 (287)
T ss_dssp EEEEEEHH
T ss_pred eEEEEEhh
Confidence 44556665
No 219
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=77.58 E-value=4.9 Score=36.83 Aligned_cols=125 Identities=19% Similarity=0.192 Sum_probs=74.0
Q ss_pred cChhhHHHHHHHHHHcCCCEE--Eeee----------cc--------------------Ccc----cC--CCCCCHHHHh
Q 025927 67 ANFAKLGEQVKAVELAGCDWI--HVDV----------MD--------------------GRF----VP--NITIGPLVVD 108 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~l--HiDI----------MD--------------------G~F----Vp--N~tfgp~~I~ 108 (246)
.|.....+.+++.+++|++.+ |+|. .. |.- .+ +-.+..+.|+
T Consensus 143 ~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~ 222 (368)
T 2nli_A 143 KDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIE 222 (368)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHH
Confidence 577788889999999998865 6662 11 110 11 3356778899
Q ss_pred hcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEcc--C-Cc-ccccHHHHHHHHHHc-CCcEEEEEcCC-CChHHHH
Q 025927 109 ALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHC--E-QS-STIHLHRTLNQIKDL-GAKAGVVLNPA-TSLSAIE 182 (246)
Q Consensus 109 ~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~--E-~~-~~~~~~~~i~~Ik~~-G~k~GlAlnP~-Tpve~l~ 182 (246)
++|+.++.|+-+-. +..| ...+.+.++|+|.|.++- - .. ........+..+++. +-++=|..+-+ ..-+++.
T Consensus 223 ~lr~~~~~PvivK~-v~~~-e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~ 300 (368)
T 2nli_A 223 EIAGHSGLPVFVKG-IQHP-EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVA 300 (368)
T ss_dssp HHHHHSSSCEEEEE-ECSH-HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHH
T ss_pred HHHHHcCCCEEEEc-CCCH-HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHH
Confidence 99998888987764 3344 346678899999999942 1 00 011223555666543 22333444443 2334444
Q ss_pred Hhhh-hcceEEE
Q 025927 183 CVLD-VVDLVLI 193 (246)
Q Consensus 183 ~~l~-~vD~VLv 193 (246)
+.|. -+|.|.+
T Consensus 301 kalalGAd~V~i 312 (368)
T 2nli_A 301 KALASGADVVAL 312 (368)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 4443 3777766
No 220
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=77.56 E-value=16 Score=32.21 Aligned_cols=126 Identities=17% Similarity=0.183 Sum_probs=71.1
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+ +.=|+--...++..+.-+++ ++..++. |---|.
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl---~v~GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~grvpvi 77 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGL---TPLGSTGEFAYLGTAQREAV--------------------VRATIEAAQRRVPVV 77 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCB---BTTSGGGTGGGCCHHHHHHH--------------------HHHHHHHHTTSSCBE
T ss_pred CcCHHHHHHHHHHHHHcCCCEE---EECccccCccccCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5899999999999999998754 22233333345555443333 2222221 111133
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHHH----hhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIEC----VLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~~----~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+.. +.+.+++=+++==.|+..|..+.++++.++.
T Consensus 78 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 78 AGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp EEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 343322234455566666777877777777752 2233332 2344554344444588888888888877664
No 221
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=77.50 E-value=9.9 Score=34.53 Aligned_cols=147 Identities=13% Similarity=0.234 Sum_probs=78.7
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCC-----CC--------HHHHhhcccCCCCCeeEEEeccCcccchHH
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT-----IG--------PLVVDALRPVTDLPLDVHLMIVEPEQRVPD 133 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~t-----fg--------p~~I~~ir~~t~~plDvHLMV~~P~~~i~~ 133 (246)
.|+...-+..+++.+.|+|.|=+=.. .=-|+-. .+ .++|+.|++.++.|+. +=+.+|+. ++.
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGge--STrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpIS--IDT~~~~V-a~a 120 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGE--ATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLIS--VDTSRPRV-MRE 120 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC--CSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEE--EECSCHHH-HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCC--CCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEE--EeCCCHHH-HHH
Confidence 46777778888888999998644322 1123322 00 1356666665554432 23345544 456
Q ss_pred HHhcCCCEEEE-ccCCcccccHHHHHHHHHHcCCcEEEEEcCCCC---------------hHHHHHhhhh-----cc--e
Q 025927 134 FIKAGADIVSV-HCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS---------------LSAIECVLDV-----VD--L 190 (246)
Q Consensus 134 ~~~agad~It~-H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp---------------ve~l~~~l~~-----vD--~ 190 (246)
-.++|+++|-= -.+ .+ .+++..+++.|+.+-+.=+.++| .+.+++.++. ++ .
T Consensus 121 Al~aGa~iINDVsg~----~~-~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~ 195 (314)
T 3tr9_A 121 AVNTGADMINDQRAL----QL-DDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDR 195 (314)
T ss_dssp HHHHTCCEEEETTTT----CS-TTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHcCCCEEEECCCC----Cc-hHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhH
Confidence 67789998742 222 12 25677788888776655554444 1222222221 22 2
Q ss_pred EEEEeecCCCCC---CcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 191 VLIMSVNPGFGG---QSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 191 VLvMsV~PGfgG---Q~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
|. ++||||. .+-....++-++.++++. +.|+..
T Consensus 196 Ii---lDPG~G~~~F~Kt~~~n~~lL~~l~~l~-~lg~Pv 231 (314)
T 3tr9_A 196 II---IDPGFGQGNYGKNVSENFYLLNKLPEFV-AMGLPV 231 (314)
T ss_dssp EE---EECCCCSGGGCCCHHHHHHHHHTTHHHH-TTSSCB
T ss_pred EE---EeCCCCchhhcCCHHHHHHHHHHHHHHh-cCCCCE
Confidence 22 6999872 233455566666666653 334443
No 222
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=77.28 E-value=19 Score=29.95 Aligned_cols=107 Identities=10% Similarity=0.064 Sum_probs=61.0
Q ss_pred CcccchHHHHhcCCCEEEEccCCccc---ccHHHHHHHHHHcCCcEEEEE------cCCCC--------hHHHHHhhhh-
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQSST---IHLHRTLNQIKDLGAKAGVVL------NPATS--------LSAIECVLDV- 187 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~~~~---~~~~~~i~~Ik~~G~k~GlAl------nP~Tp--------ve~l~~~l~~- 187 (246)
+++..++...++|.+.|-+..+.... ..+.++.+.+++.|+++.... ++..+ ++.++..++.
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 97 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDC 97 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45567778888899988887763211 346677888889998876532 23322 2344444443
Q ss_pred ----cceEEEEeecC--CC---CCCcc----cHHHHHHHHHHHHHHHhcCCCCeEEEeC
Q 025927 188 ----VDLVLIMSVNP--GF---GGQSF----IESQVKKISDLRRMCLEKGVNPWIEVDG 233 (246)
Q Consensus 188 ----vD~VLvMsV~P--Gf---gGQ~F----~~~~l~KI~~lr~l~~~~~~~~~I~VDG 233 (246)
+..|.+ ...+ |. .+... .....+.++++-++.++.|..+-+|-.+
T Consensus 98 ~~lG~~~v~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~ 155 (290)
T 2qul_A 98 HLLGAPVFAG-LTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVN 155 (290)
T ss_dssp HHHTCSEEEE-EEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCC
T ss_pred HHcCCCEEEe-eccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCc
Confidence 455543 2222 32 12222 2344555666666666777766666543
No 223
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=77.19 E-value=2.8 Score=39.80 Aligned_cols=68 Identities=21% Similarity=0.210 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEEEE
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
...+.++.+.++|+|.+|+|..-|+- .+-.+.++++|+.+ ++|+-+. -|.. ......+.++|+|.|.+
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~----~~~~~~i~~i~~~~~~~pvi~~-~v~t-~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNS----VYQIAMVHYIKQKYPHLQVIGG-NVVT-AAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCS----HHHHHHHHHHHHHCTTCEEEEE-EECS-HHHHHHHHHHTCSEEEE
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcc----hhHHHHHHHHHHhCCCCceEec-ccch-HHHHHHHHHcCCCEEEE
Confidence 35678888999999999999976642 23357899998876 6776542 1233 34577888999999976
No 224
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=77.15 E-value=2.5 Score=38.34 Aligned_cols=99 Identities=21% Similarity=0.237 Sum_probs=61.4
Q ss_pred cccchH---HHHhcCCCEEEEccCC-c-c--cc---cHHHHHHHHHHcCCcEEEEEcCCCC-------hHHHHHhhh-hc
Q 025927 127 PEQRVP---DFIKAGADIVSVHCEQ-S-S--TI---HLHRTLNQIKDLGAKAGVVLNPATS-------LSAIECVLD-VV 188 (246)
Q Consensus 127 P~~~i~---~~~~agad~It~H~E~-~-~--~~---~~~~~i~~Ik~~G~k~GlAlnP~Tp-------ve~l~~~l~-~v 188 (246)
|+..++ .+.++||..+++|+.. . . .. ...+++..||+. +.+.|++.|. -+.+..+.. .-
T Consensus 31 peEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~---~d~iI~~TTgg~~~~~~eerla~~~~~~P 107 (311)
T 3e02_A 31 PEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKER---TDAILNITTGGGLGMSLDERLAPARAARP 107 (311)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHH---CCCEEEECSSCSTTCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHh---CCcEEEECCCCCCCCCHHHHHHHHHhcCC
Confidence 444444 4567899999999864 1 1 11 255788999984 4567887765 133444322 45
Q ss_pred ceEEEEeecCC---CC-----------------------CCcccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 189 DLVLIMSVNPG---FG-----------------------GQSFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 189 D~VLvMsV~PG---fg-----------------------GQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
|+. |++.| |+ +...-..+.+.++++-+.+.++|..+++++
T Consensus 108 e~a---Sln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~ 173 (311)
T 3e02_A 108 EVA---SMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFEC 173 (311)
T ss_dssp SEE---EEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred Cee---eecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 666 56655 43 111113456678888888888888888776
No 225
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=77.06 E-value=13 Score=30.66 Aligned_cols=70 Identities=16% Similarity=0.097 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCee-EEEe-----------ccCcc---------
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD-VHLM-----------IVEPE--------- 128 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plD-vHLM-----------V~~P~--------- 128 (246)
..+.+.++.+.+.|.+.+-+...+ ...++.+++.-+..++.+. +|.- ..+|.
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (260)
T 1k77_A 15 VPFIERFAAARKAGFDAVEFLFPY-------NYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADI 87 (260)
T ss_dssp SCGGGHHHHHHHHTCSEEECSCCT-------TSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEecCCC-------CCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHH
Confidence 456677788888888887765421 2334455544444566554 4531 12332
Q ss_pred -cchHHHHhcCCCEEEEcc
Q 025927 129 -QRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 129 -~~i~~~~~agad~It~H~ 146 (246)
+.++...+.|+++|.+|.
T Consensus 88 ~~~i~~a~~lG~~~v~~~~ 106 (260)
T 1k77_A 88 DLALEYALALNCEQVHVMA 106 (260)
T ss_dssp HHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHHHcCCCEEEECc
Confidence 233334556888888874
No 226
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=76.98 E-value=3.4 Score=34.85 Aligned_cols=138 Identities=12% Similarity=-0.050 Sum_probs=78.8
Q ss_pred EEeeeecccCh--hhHHHHHHHHHHcCCCEEEeeeccCcccCCC-CCCHHHHhhccc---CCCCCeeEEEe-ccCcc---
Q 025927 59 IVSPSILSANF--AKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRP---VTDLPLDVHLM-IVEPE--- 128 (246)
Q Consensus 59 ~IsPSIl~aD~--~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~-tfgp~~I~~ir~---~t~~plDvHLM-V~~P~--- 128 (246)
+|+-|.++..- ..+.+.++.+.+.|.+.+-+-.- +.+++ .+.+..++++++ -.++.+-.|-- ...|.
T Consensus 2 klg~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~---~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 78 (286)
T 3dx5_A 2 KYSLCTISFRHQLISFTDIVQFAYENGFEGIELWGT---HAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSAD 78 (286)
T ss_dssp EEEEEGGGGTTSCCCHHHHHHHHHHTTCCEEEEEHH---HHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSC
T ss_pred eEEEEeeeccCCCCCHHHHHHHHHHhCCCEEEEccc---ccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchh
Confidence 45666666544 67999999999999998877321 11111 123344444433 34676666521 11121
Q ss_pred ---------cchHHHHhcCCCEEEEccCCcc------------cccHHHHHHHHHHcCCcEEEEEcCCCC---hHHHHHh
Q 025927 129 ---------QRVPDFIKAGADIVSVHCEQSS------------TIHLHRTLNQIKDLGAKAGVVLNPATS---LSAIECV 184 (246)
Q Consensus 129 ---------~~i~~~~~agad~It~H~E~~~------------~~~~~~~i~~Ik~~G~k~GlAlnP~Tp---ve~l~~~ 184 (246)
+.++...+.|+.+|.+|.-... .+.+.++....++.|++.++=-.|.+. .+.+..+
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l 158 (286)
T 3dx5_A 79 FEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLEL 158 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHH
Confidence 2344445679999999864210 012445566677889887777655533 4566667
Q ss_pred hhhcce-EEEEeecCC
Q 025927 185 LDVVDL-VLIMSVNPG 199 (246)
Q Consensus 185 l~~vD~-VLvMsV~PG 199 (246)
++.+|- -+=+..++|
T Consensus 159 ~~~~~~~~vg~~~D~~ 174 (286)
T 3dx5_A 159 LGEVDHPNLKINLDFL 174 (286)
T ss_dssp HHHHCCTTEEEEEEHH
T ss_pred HHhcCCCCeEEEeccc
Confidence 766651 133444554
No 227
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=76.93 E-value=3.2 Score=37.86 Aligned_cols=85 Identities=19% Similarity=0.231 Sum_probs=52.3
Q ss_pred cEEeeeecc----cChhhHHHHHHHHHHcCCCEEEeeeccCcccCC------CCCCHHHHhhcccCCCCCeeEEEeccCc
Q 025927 58 IIVSPSILS----ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN------ITIGPLVVDALRPVTDLPLDVHLMIVEP 127 (246)
Q Consensus 58 ~~IsPSIl~----aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN------~tfgp~~I~~ir~~t~~plDvHLMV~~P 127 (246)
++|||.=+. .+.....+-++.|+++|+|+||+-. |.+.+. -.+..+.++.+|+.+++|+-+==-+.+|
T Consensus 230 vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~ 307 (363)
T 3l5l_A 230 ARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV--GFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTP 307 (363)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSH
T ss_pred EEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec--CccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCH
Confidence 577875321 2334555667889999999999865 222221 1234567888888777775332222345
Q ss_pred ccchHHHHhcC-CCEEEEc
Q 025927 128 EQRVPDFIKAG-ADIVSVH 145 (246)
Q Consensus 128 ~~~i~~~~~ag-ad~It~H 145 (246)
+. .+.+++.| +|.|.+=
T Consensus 308 e~-a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 308 QL-AEAALQANQLDLVSVG 325 (363)
T ss_dssp HH-HHHHHHTTSCSEEECC
T ss_pred HH-HHHHHHCCCccEEEec
Confidence 44 45666677 9999874
No 228
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=76.40 E-value=20 Score=32.77 Aligned_cols=119 Identities=19% Similarity=0.226 Sum_probs=78.5
Q ss_pred CCCeeEEEecc-----CcccchHHHHhc--CCCEEEEccCCc---------ccccHHHHHHHHHH--------cCCcEEE
Q 025927 115 DLPLDVHLMIV-----EPEQRVPDFIKA--GADIVSVHCEQS---------STIHLHRTLNQIKD--------LGAKAGV 170 (246)
Q Consensus 115 ~~plDvHLMV~-----~P~~~i~~~~~a--gad~It~H~E~~---------~~~~~~~~i~~Ik~--------~G~k~Gl 170 (246)
+.|+-+-+--. .|+.|++.+..+ ++|+|.+-+-+= ..+.+.++++.+++ ..+.+.+
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~v 225 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLV 225 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEE
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEE
Confidence 56788887552 577777655444 489998854310 01234567777765 3577889
Q ss_pred EEcCCCChHHHHHhhh-----hcceEEEEeec--------C-------CCCCCcccHHHHHHHHHHHHHHHhcCCCCeEE
Q 025927 171 VLNPATSLSAIECVLD-----VVDLVLIMSVN--------P-------GFGGQSFIESQVKKISDLRRMCLEKGVNPWIE 230 (246)
Q Consensus 171 AlnP~Tpve~l~~~l~-----~vD~VLvMsV~--------P-------GfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~ 230 (246)
=+.|+.+.+.+..+.. -+|.|.+-..- | |++|.+..|..++-|+++++..+. ++.|.
T Consensus 226 Ki~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~---~ipvI 302 (367)
T 3zwt_A 226 KIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG---RVPII 302 (367)
T ss_dssp EECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT---CSCEE
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC---CceEE
Confidence 9999988666555543 28988875321 1 355677777888888888777532 36788
Q ss_pred EeCCCC
Q 025927 231 VDGGVG 236 (246)
Q Consensus 231 VDGGI~ 236 (246)
..|||+
T Consensus 303 ~~GGI~ 308 (367)
T 3zwt_A 303 GVGGVS 308 (367)
T ss_dssp EESSCC
T ss_pred EECCCC
Confidence 999996
No 229
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=76.30 E-value=7.7 Score=32.33 Aligned_cols=113 Identities=17% Similarity=0.192 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC----CCCCeeEEE-----ecc---------CcccchHHHH
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV----TDLPLDVHL-----MIV---------EPEQRVPDFI 135 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~----t~~plDvHL-----MV~---------~P~~~i~~~~ 135 (246)
++++.+.++|+|.+|+....- ++ |+.+.++.+. ..+.+|++. -|. ++..+++.+.
T Consensus 87 ~~~~~~l~~Gad~V~lg~~~l---~~----p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~ 159 (244)
T 2y88_A 87 ESLAAALATGCARVNVGTAAL---EN----PQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLD 159 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHH---HC----HHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECchHh---hC----hHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHH
Confidence 458888889999999977542 22 4455544332 123456652 222 4667788888
Q ss_pred hcCCCEEEEccCCc----ccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh----cceEEEEe
Q 025927 136 KAGADIVSVHCEQS----STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV----VDLVLIMS 195 (246)
Q Consensus 136 ~agad~It~H~E~~----~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~----vD~VLvMs 195 (246)
++|++.|.+|--.. ...+ ...++++++. ...=+..+=+ ++.+.+..++.. +|.|++-+
T Consensus 160 ~~G~~~i~~~~~~~~~~~~g~~-~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~ 226 (244)
T 2y88_A 160 SEGCSRFVVTDITKDGTLGGPN-LDLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGK 226 (244)
T ss_dssp HTTCCCEEEEETTTTTTTSCCC-HHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred hCCCCEEEEEecCCccccCCCC-HHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcH
Confidence 99999999986321 1123 3466777754 2333444444 557999998864 78877743
No 230
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=76.13 E-value=4.1 Score=37.27 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC-CCEEEEc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG-ADIVSVH 145 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag-ad~It~H 145 (246)
...+-++.|+++|+|+||+-- |.|...-.+..+.++.+|+.+++|+-+==-+ +|+.. +.+.+.| ||.|.+=
T Consensus 251 ~~~~~a~~l~~~G~d~i~v~~--~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a-~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 251 TYTAAAALLNKHRIVYLHIAE--VDWDDAPDTPVSFKRALREAYQGVLIYAGRY-NAEKA-EQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC--CBTTBCCCCCHHHHHHHHHHCCSEEEEESSC-CHHHH-HHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEeC--CCcCCCCCccHHHHHHHHHHCCCcEEEeCCC-CHHHH-HHHHHCCCcceehhc
Confidence 444557889999999999864 3232111245678889998877776443233 56654 4556666 9999874
No 231
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=76.08 E-value=3.5 Score=36.97 Aligned_cols=99 Identities=19% Similarity=0.220 Sum_probs=60.8
Q ss_pred cccchH---HHHhcCCCEEEEccCCcc------cccHHHHHHHHHHcCCcEEEEEcCCCC-----h-HHHHHhhhhcceE
Q 025927 127 PEQRVP---DFIKAGADIVSVHCEQSS------TIHLHRTLNQIKDLGAKAGVVLNPATS-----L-SAIECVLDVVDLV 191 (246)
Q Consensus 127 P~~~i~---~~~~agad~It~H~E~~~------~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-----v-e~l~~~l~~vD~V 191 (246)
|+..++ .+.++||..+.+|+..-. .+...+++..||+.+ +++.|++.|. . +.+..+--.-|+.
T Consensus 33 peEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~--pd~ii~~TTgg~~~~~eeR~~~~~~~Pe~a 110 (284)
T 3chv_A 33 VSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHC--PGMIVQFSTGGRSGAGQARGGMLPLKPDMA 110 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHS--TTCEEEECCCTTTCCGGGGGTTGGGCCSEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhC--CCeEEEeCCCCCCCCHHHHHHhhhcCCCEE
Confidence 444444 456789999999986311 112568899999863 2777777762 2 2222221134554
Q ss_pred EEEeecCC---CCCCcccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 192 LIMSVNPG---FGGQSFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 192 LvMsV~PG---fgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
|++.| |+..-| ..+.+.++++-+.+.++|..+++++
T Consensus 111 ---Sl~~Gs~Nf~~~v~-~n~~~~~~~~~~~~~e~Gv~pE~e~ 149 (284)
T 3chv_A 111 ---SLSVGSNNFPSRVY-ENPPDLVDWLAAQMRSYRVTPEIEA 149 (284)
T ss_dssp ---EECCSCEECSSSEE-CCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ---EecCcccccCCccc-cCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 56665 332222 3456677777777888888888877
No 232
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=76.03 E-value=28 Score=28.75 Aligned_cols=116 Identities=10% Similarity=0.003 Sum_probs=69.5
Q ss_pred HHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEE--EEc-cCC
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIV--SVH-CEQ 148 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~I--t~H-~E~ 148 (246)
.++++.+.++|+|.+|++..-... |+-..-.+.++.+|+.. +.++- +=+.+++. .....++|+|+| +++ ++.
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~-~~~~~~~~~i~~i~~~~~~~~v~--~~~~t~~e-a~~a~~~Gad~i~~~v~g~~~ 166 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDR-HDGLDIASFIRQVKEKYPNQLLM--ADISTFDE-GLVAHQAGIDFVGTTLSGYTP 166 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCC-TTCCCHHHHHHHHHHHCTTCEEE--EECSSHHH-HHHHHHTTCSEEECTTTTSST
T ss_pred HHHHHHHHHcCCCEEEEcccccCC-CCCccHHHHHHHHHHhCCCCeEE--EeCCCHHH-HHHHHHcCCCEEeeeccccCC
Confidence 467888899999999998754211 21001157888888754 33322 12234444 556778999999 444 211
Q ss_pred c----ccccHHHHHHHHHHcCCcEEEEEcCCCC-hHHHHHhhhh-cceEEEEe
Q 025927 149 S----STIHLHRTLNQIKDLGAKAGVVLNPATS-LSAIECVLDV-VDLVLIMS 195 (246)
Q Consensus 149 ~----~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-ve~l~~~l~~-vD~VLvMs 195 (246)
. ...+ .+.++.+++. .+-+...=+-. .+.+..++.. +|.|.+-+
T Consensus 167 ~~~~~~~~~-~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGs 216 (234)
T 1yxy_A 167 YSRQEAGPD-VALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGG 216 (234)
T ss_dssp TSCCSSSCC-HHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECH
T ss_pred CCcCCCCCC-HHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEch
Confidence 0 1122 2556777765 33344444544 8888888875 88887744
No 233
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=75.84 E-value=2.8 Score=37.37 Aligned_cols=85 Identities=14% Similarity=0.112 Sum_probs=55.2
Q ss_pred CcEEeeeecccC-------hhhHHHHHHHHHHcCCCEEEeeeccCcccCCC---------CCCHHHHhhcccCC------
Q 025927 57 DIIVSPSILSAN-------FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI---------TIGPLVVDALRPVT------ 114 (246)
Q Consensus 57 ~~~IsPSIl~aD-------~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~---------tfgp~~I~~ir~~t------ 114 (246)
+..+.+|+...+ ...+.+.++++.+ |+|.+-+.+. .||. .+-.++++++|+.+
T Consensus 133 ~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~----sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~ 207 (336)
T 1f76_A 133 DGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINIS----SPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAM 207 (336)
T ss_dssp CSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECC----CSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEcc----CCCCCCcccccCHHHHHHHHHHHHHHHHhhhhc
Confidence 346888887765 5666677777765 7888655432 4442 22246788888866
Q ss_pred ---CCCeeEEEecc----CcccchHHHHhcCCCEEEEcc
Q 025927 115 ---DLPLDVHLMIV----EPEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 115 ---~~plDvHLMV~----~P~~~i~~~~~agad~It~H~ 146 (246)
++|+-+=+-.. +-..+.+.+.++|+|.|++|-
T Consensus 208 ~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 208 HHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp HTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 78877764322 112345677889999999983
No 234
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=75.26 E-value=50 Score=30.27 Aligned_cols=123 Identities=17% Similarity=0.206 Sum_probs=69.7
Q ss_pred cChhhHHHHHHHHHH-----cCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCE
Q 025927 67 ANFAKLGEQVKAVEL-----AGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 141 (246)
Q Consensus 67 aD~~~l~~~i~~l~~-----~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~ 141 (246)
.|-..+.+.++.+.+ +|.+++.+| ||=|.+. |...+ | + .-+|.+|
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iD--dgW~~~~-----------r~~~G---~--~-~~~~~kF----------- 72 (397)
T 3a5v_A 23 VDEQLILDAAKAIASSGLKDLGYNYVIID--DCWQKNE-----------RESSK---T--L-LADPTKF----------- 72 (397)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHTCCEEECC--SSCBCSS-----------CCTTS---C--C-CBCTTTC-----------
T ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEEC--CCcCCCC-----------CCCCC---C--e-EEChhcC-----------
Confidence 567778888888777 899999986 6766421 10000 0 0 1122222
Q ss_pred EEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCC--------hHHHH---Hhhh--hcceEEEEeecCCCCCCcccHH
Q 025927 142 VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS--------LSAIE---CVLD--VVDLVLIMSVNPGFGGQSFIES 208 (246)
Q Consensus 142 It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp--------ve~l~---~~l~--~vD~VLvMsV~PGfgGQ~F~~~ 208 (246)
...+..+.++||+.|+|+||-+.|++. ++..+ .++. -||+|=+=-+.. .+|...+.
T Consensus 73 ---------P~Gl~~l~~~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~--~~~~~~~~ 141 (397)
T 3a5v_A 73 ---------PRGIKPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTWAKWGIDYLKYDNCYN--QGQSGTPK 141 (397)
T ss_dssp ---------TTCHHHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHHTCCEEEEECTTC--TTCCSSHH
T ss_pred ---------CcCHHHHHHHHHHcCCEEEEEecCCCCccCCCHHHHHHHHHHHHHHHHcCCCEEEECCCcC--CCcCCCcc
Confidence 113778899999999999999999963 21111 1222 266655422221 22333332
Q ss_pred -HHHHHHHHHHHHHhcCCCCeEE
Q 025927 209 -QVKKISDLRRMCLEKGVNPWIE 230 (246)
Q Consensus 209 -~l~KI~~lr~l~~~~~~~~~I~ 230 (246)
..++.+.+++.+.+.+.++.++
T Consensus 142 ~~~~~y~~m~~~L~~~~~~i~~~ 164 (397)
T 3a5v_A 142 LSYDRYKAMGNALNKTGRPMLYS 164 (397)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEE
T ss_pred hhHHHHHHHHHHHHhhCCCcEEE
Confidence 2455566665566666665555
No 235
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=75.23 E-value=6.2 Score=38.39 Aligned_cols=64 Identities=14% Similarity=0.090 Sum_probs=44.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccC
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE 147 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E 147 (246)
+...+.+.++.+.+.|++++++| ||-+- . .| -.++..+
T Consensus 210 te~~v~~~ad~~~~~G~~~~~ID--dgW~~---~-----------------------------------~G--dw~~d~~ 247 (564)
T 1zy9_A 210 TWEETLKNLKLAKNFPFEVFQID--DAYEK---D-----------------------------------IG--DWLVTRG 247 (564)
T ss_dssp CHHHHHHHHHHGGGTTCSEEEEC--TTSEE---E-----------------------------------TT--EEEEECT
T ss_pred CHHHHHHHHHHHHhcCCcEEEEC--ccccc---c-----------------------------------cC--CcccCcc
Confidence 55677777777878888888887 45542 0 01 1122233
Q ss_pred CcccccHHHHHHHHHHcCCcEEEEEcCC
Q 025927 148 QSSTIHLHRTLNQIKDLGAKAGVVLNPA 175 (246)
Q Consensus 148 ~~~~~~~~~~i~~Ik~~G~k~GlAlnP~ 175 (246)
. -+++..+++++|+.|+|+|+.++|.
T Consensus 248 k--FP~lk~lvd~lh~~Glk~Giw~~P~ 273 (564)
T 1zy9_A 248 D--FPSVEEMAKVIAENGFIPGIWTAPF 273 (564)
T ss_dssp T--CCCHHHHHHHHHHTTCEEEEEECTT
T ss_pred c--CCCHHHHHHHHHHCCCEEEEEeCCC
Confidence 2 2348889999999999999999997
No 236
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=74.91 E-value=2.9 Score=37.29 Aligned_cols=102 Identities=20% Similarity=0.275 Sum_probs=63.1
Q ss_pred cccchH---HHHhcCCCEEEEccCCcc------cccHHHHHHHHHHcCCcEEEEEcCCCCh-----HHHHHhhh-hcceE
Q 025927 127 PEQRVP---DFIKAGADIVSVHCEQSS------TIHLHRTLNQIKDLGAKAGVVLNPATSL-----SAIECVLD-VVDLV 191 (246)
Q Consensus 127 P~~~i~---~~~~agad~It~H~E~~~------~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv-----e~l~~~l~-~vD~V 191 (246)
|+..++ .+.++||..+.+|+..-. .+...+++..||+.. +++.|++.|.- +.-..++. .-|+.
T Consensus 29 peEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~--pd~ii~~Ttg~~~~~~e~R~~~~~~~Pe~a 106 (275)
T 3no5_A 29 VSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHA--PGMITQVSTGGRSGAGNERGAMLSLRPDMA 106 (275)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHS--TTCEEEECCCCCTTCCGGGGTTGGGCCSEE
T ss_pred HHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhC--CCeEEEeCCCCCCCCHHHHhhHhhcCCCEE
Confidence 455554 456789999999986310 113568899999853 47888888752 11111111 23443
Q ss_pred EEEeecCC---CCCCcccHHHHHHHHHHHHHHHhcCCCCeEEE-eCC
Q 025927 192 LIMSVNPG---FGGQSFIESQVKKISDLRRMCLEKGVNPWIEV-DGG 234 (246)
Q Consensus 192 LvMsV~PG---fgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V-DGG 234 (246)
|++.| |+..-|. ++.+.++++-+.+.++|..+++++ |-|
T Consensus 107 ---Sl~~gs~Nf~~~v~~-N~~~~~~~~~~~~~e~Gi~pE~e~fd~g 149 (275)
T 3no5_A 107 ---SLATGSVNFPTRVYD-NPPELVDWLAAEMKTYGIKPEVEAFDLS 149 (275)
T ss_dssp ---EEECSCEECSSSEEC-CCHHHHHHHHHHHHHTTCEEEEEESSTH
T ss_pred ---EecCccccccccccc-CCHHHHHHHHHHHHHcCCeeEEEEEcHH
Confidence 34455 5554443 456778888788888888888877 544
No 237
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=74.81 E-value=4.9 Score=36.89 Aligned_cols=149 Identities=17% Similarity=0.182 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccC---------CCCCC-----HHHHhhcccCC-----CCCeeEEEecc------
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVP---------NITIG-----PLVVDALRPVT-----DLPLDVHLMIV------ 125 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVp---------N~tfg-----p~~I~~ir~~t-----~~plDvHLMV~------ 125 (246)
.+.++++.|.++|+++|.+|=-....+. .-... ...++.++... +.++.+|+.-.
T Consensus 168 a~~~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~HiC~gn~~s~~ 247 (375)
T 1ypx_A 168 AYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTW 247 (375)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEECCC------
T ss_pred HHHHHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeccccCCcc
Confidence 3557889999999999999975433222 11222 22344444422 34566677533
Q ss_pred ----CcccchHHHH-hcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCC-C----ChHHH----HHhhhhc--c
Q 025927 126 ----EPEQRVPDFI-KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-T----SLSAI----ECVLDVV--D 189 (246)
Q Consensus 126 ----~P~~~i~~~~-~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-T----pve~l----~~~l~~v--D 189 (246)
+=...++.+. +.++|.+++-+.+....+ .+.++.+.+.|.++|+-+=+. + +.+.+ +..++.+ |
T Consensus 248 ~~~g~~~~i~~~l~~~~~~d~i~lE~~~~r~g~-~e~L~~~~~~~~~v~lGvvd~~~~~~e~~e~v~~ri~~a~~~v~~e 326 (375)
T 1ypx_A 248 IAEGGYGPVAETLFGKLNIDGFFLEYDNERSGD-FAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLS 326 (375)
T ss_dssp ----CCSGGGHHHHTTCCCSEEEEECCSCC----CCTTCCCCCTTCEEEEEEECSSSCC-CCSHHHHHHHHHHHHHSCGG
T ss_pred ccccchHHHHHHHHhhCCCCEEEEEecCCCCCc-HHHHHHhhhcCCeEEEeeecCcCCCCCCHHHHHHHHHHHHHhcCcc
Confidence 2235578888 999999998754321111 123444443355565544321 1 12332 3333333 3
Q ss_pred eEEEEeecCCCC----C-CcccHHHHHHHHHHHHHHH
Q 025927 190 LVLIMSVNPGFG----G-QSFIESQVKKISDLRRMCL 221 (246)
Q Consensus 190 ~VLvMsV~PGfg----G-Q~F~~~~l~KI~~lr~l~~ 221 (246)
. +..+-+=||+ | -.=-+.+.+||+.+.+..+
T Consensus 327 ~-l~lsPdCGl~s~~~g~~~t~~~a~~kL~~~v~~A~ 362 (375)
T 1ypx_A 327 Q-LRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLAN 362 (375)
T ss_dssp G-EEEEESSCCC--------CHHHHHHHHHHHHHHHH
T ss_pred c-eEecCCCCccccccCCCCCHHHHHHHHHHHHHHHH
Confidence 3 2333333665 1 1223567888888876544
No 238
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=74.80 E-value=5.4 Score=35.14 Aligned_cols=76 Identities=21% Similarity=0.138 Sum_probs=44.5
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchH--HHHhcCCCEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVP--DFIKAGADIVS 143 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~--~~~~agad~It 143 (246)
.|+..+.+.++++.+.|++.+.+==+=|.-.|+-. .+.++++++.. +.++.+|.--..=..... .-+++|+++|-
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~--~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd 230 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIM--KDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVD 230 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHH--HHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHH--HHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEE
Confidence 37778888888888888888776544454443321 13455555543 467888874332222222 23567888765
Q ss_pred E
Q 025927 144 V 144 (246)
Q Consensus 144 ~ 144 (246)
.
T Consensus 231 ~ 231 (298)
T 2cw6_A 231 S 231 (298)
T ss_dssp E
T ss_pred e
Confidence 4
No 239
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=74.65 E-value=17 Score=32.73 Aligned_cols=122 Identities=13% Similarity=0.137 Sum_probs=82.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc-CCCCCeeEEEecc---CcccchHHHHhcCCCEEE
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP-VTDLPLDVHLMIV---EPEQRVPDFIKAGADIVS 143 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~-~t~~plDvHLMV~---~P~~~i~~~~~agad~It 143 (246)
++..+.++++.+.++|+|.+|+=+-+ |+-++..+.+++|-+ .-.+++..|--.. +|..-++.+++.|.++|-
T Consensus 109 E~~~M~~dI~~~~~~GAdGvVfG~L~----~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrIL 184 (287)
T 3iwp_A 109 EIEVMKADIRLAKLYGADGLVFGALT----EDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVL 184 (287)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBC----TTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeeC----CCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEE
Confidence 45567789999999999999998733 233445555655533 2357888887644 699999999999999998
Q ss_pred EccCC-cccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh--hcceEEE
Q 025927 144 VHCEQ-SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD--VVDLVLI 193 (246)
Q Consensus 144 ~H~E~-~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~--~vD~VLv 193 (246)
.+==. .+.+.+..+-+.+++.+-+.-|..--+-..+.+..++. -++.+-.
T Consensus 185 TSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 185 TSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILEGSGATEFHC 237 (287)
T ss_dssp ECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHHHHHCCSEEEE
T ss_pred CCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHHHhhCCCEEeE
Confidence 87421 12334444444455566566666666677777777765 3565554
No 240
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=74.14 E-value=8.2 Score=33.42 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=65.2
Q ss_pred cEEeeeecccChh----hHHHHHHHHHHcCCCEEEeeeccCc-ccCCCCCCHHHHhhcccCCCCCe-eEEEec-----cC
Q 025927 58 IIVSPSILSANFA----KLGEQVKAVELAGCDWIHVDVMDGR-FVPNITIGPLVVDALRPVTDLPL-DVHLMI-----VE 126 (246)
Q Consensus 58 ~~IsPSIl~aD~~----~l~~~i~~l~~~g~d~lHiDIMDG~-FVpN~tfgp~~I~~ir~~t~~pl-DvHLMV-----~~ 126 (246)
.+|+-++++.--. .+.+.++.+.++|.+.+-+-.-+.+ + ....++.++++-+-.++.+ -+|.-. .+
T Consensus 13 ~~~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~VEl~~~~~~~~---~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~ 89 (303)
T 3l23_A 13 KEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAI---GGVPMMDFKKMAEDAGLKIISSHVNPVDTSISD 89 (303)
T ss_dssp CCCEEEGGGGGGGGGSSCHHHHHHHHHHTTCCEEEECCEETTEE---TTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSS
T ss_pred CceEEEEEEchhhhccCCHHHHHHHHHHcCCCEEEeccccCccc---CCCCHHHHHHHHHHcCCeEEEEecccccccccC
Confidence 3455566655432 6889999999999998877532211 2 1234555555544456654 567543 23
Q ss_pred cc--------------------cchHHHHhcCCCEEEEccCC--cc-------cccHHHHHHHHHHcCCcEEEEE
Q 025927 127 PE--------------------QRVPDFIKAGADIVSVHCEQ--SS-------TIHLHRTLNQIKDLGAKAGVVL 172 (246)
Q Consensus 127 P~--------------------~~i~~~~~agad~It~H~E~--~~-------~~~~~~~i~~Ik~~G~k~GlAl 172 (246)
|. +.++...+.|+++|.+|.-. .. .+.+.++....++.|++.++++
T Consensus 90 p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 90 PFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp TTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEE
Confidence 42 12333455699999998411 00 1124556677788999944444
No 241
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=73.98 E-value=8.5 Score=36.58 Aligned_cols=85 Identities=15% Similarity=0.220 Sum_probs=56.5
Q ss_pred CCcEEeeeecccChhhHHHHHHHHHHcCCCEEEe--eeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccC-------
Q 025927 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV--DVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVE------- 126 (246)
Q Consensus 56 ~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHi--DIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~------- 126 (246)
+..+|+.||..-+...+.+++++..+.|+|.+=+ |..+. +-| .+.++.+++.+++|+-+|+=...
T Consensus 3 ~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRvD~l~~-~~~-----~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~ 76 (523)
T 2o7s_A 3 NPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKD-FNP-----LEDLKTIIKKSPLPTLFTYRPKWEGGQYEG 76 (523)
T ss_dssp SCCEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEEGGGCSS-CCH-----HHHHHHHHHHCSSCEEEECCBGGGTSSBCS
T ss_pred CCCEEEEEecCCCHHHHHHHHHHhhhcCCCEEEEEEecccc-cCh-----HHHHHHHHhcCCCcEEEEecccccCCCCCC
Confidence 4678999999999999999998877778888755 44432 111 35677777667889888774332
Q ss_pred -cccchH---HHHhcCCCEEEEcc
Q 025927 127 -PEQRVP---DFIKAGADIVSVHC 146 (246)
Q Consensus 127 -P~~~i~---~~~~agad~It~H~ 146 (246)
.+.|++ ...+.|+++|.+-+
T Consensus 77 ~~~~~~~ll~~~~~~~~~yiDvEl 100 (523)
T 2o7s_A 77 DENERRDVLRLAMELGADYIDVEL 100 (523)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEC
Confidence 123333 33445777776544
No 242
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=73.93 E-value=7.2 Score=35.32 Aligned_cols=77 Identities=17% Similarity=0.248 Sum_probs=49.3
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 153 HLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 153 ~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
.+...++..|+..-..-+.+-.+| ++++++.+. -+|.|++= .|.|+.++ ++.+++.. +..|++
T Consensus 193 ~i~~Av~~ar~~~p~~kIeVEv~t-l~e~~eAl~aGaDiImLD---------n~s~~~l~---~av~~~~~---~v~lea 256 (300)
T 3l0g_A 193 SITLAIQRLRKNLKNEYIAIECDN-ISQVEESLSNNVDMILLD---------NMSISEIK---KAVDIVNG---KSVLEV 256 (300)
T ss_dssp CHHHHHHHHHHHSSSCCEEEEESS-HHHHHHHHHTTCSEEEEE---------SCCHHHHH---HHHHHHTT---SSEEEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEECC-HHHHHHHHHcCCCEEEEC---------CCCHHHHH---HHHHhhcC---ceEEEE
Confidence 356777888876322234444444 566666554 59988884 35555444 33444432 578999
Q ss_pred eCCCChhhhhhccc
Q 025927 232 DGGVGPKNAYKVPN 245 (246)
Q Consensus 232 DGGI~~e~i~~l~~ 245 (246)
=||||++|++.+.+
T Consensus 257 SGGIt~~~i~~~A~ 270 (300)
T 3l0g_A 257 SGCVNIRNVRNIAL 270 (300)
T ss_dssp ESSCCTTTHHHHHT
T ss_pred ECCCCHHHHHHHHH
Confidence 99999999998764
No 243
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=73.88 E-value=2.6 Score=38.02 Aligned_cols=105 Identities=13% Similarity=0.163 Sum_probs=70.1
Q ss_pred HHHHHHH---HHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc--CcccchHHHHhcCCCEEEEcc
Q 025927 72 LGEQVKA---VELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV--EPEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 72 l~~~i~~---l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~--~P~~~i~~~~~agad~It~H~ 146 (246)
+++.|++ +.++|+|.+ |+|... .++.++.+.+..+.|+-+-++.. .|..-.++|.+.|+.+|++..
T Consensus 170 ldeai~Ra~ay~~AGAD~i--------f~~~~~-~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~ 240 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMI--------FPEAMK-TLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVDIALYCC 240 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEE--------EECCCC-SHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHhhHhcCCCEE--------EeCCCC-CHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEch
Confidence 4555544 557898765 777664 68888888775568876655443 355668899999999999986
Q ss_pred CCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 147 EQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 147 E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
-.. +..-+.+.++.|++.|...++ ...-.+.+++..++.
T Consensus 241 ~~~raa~~a~~~~~~~i~~~g~~~~~-~~~~~~~~el~~l~~ 281 (298)
T 3eoo_A 241 GAYRAMNKAALNFYETVRRDGTQKAA-VPTMQTRAQLYDYLG 281 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSGGG-GGGSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccch-hhcCCCHHHHHHHcC
Confidence 432 123366788889988865442 122247777777653
No 244
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=73.77 E-value=5.7 Score=39.77 Aligned_cols=74 Identities=19% Similarity=0.260 Sum_probs=48.9
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..|-..+.+.++.+.+.|++++++| ||=|-+.-. .-....+.. .+|.+ |-
T Consensus 342 ~~~e~~i~~~ad~~~~~G~~~~viD--DgW~~~r~~-------~~~~~Gdw~-------~d~~k----FP---------- 391 (720)
T 2yfo_A 342 DFTGDTIVDLAKEAASLGIDMVVMD--DGWFGKRND-------DNSSLGDWQ-------VNETK----LG---------- 391 (720)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEC--SSSBTTCSS-------TTSCTTCCS-------BCHHH----HT----------
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEC--cccccCCCc-------ccccCCCCe-------eChhh----cC----------
Confidence 3566678888999999999999999 887754110 000111111 02221 11
Q ss_pred cCCcccccHHHHHHHHHHcCCcEEEEEcCC
Q 025927 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPA 175 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~ 175 (246)
..+..+++++|+.|+|+||.++|.
T Consensus 392 ------~Glk~lvd~ih~~Glk~GlW~~P~ 415 (720)
T 2yfo_A 392 ------GSLAELITRVHEQGMKFGIWIEPE 415 (720)
T ss_dssp ------SCHHHHHHHHHHTTCEEEEEECTT
T ss_pred ------ccHHHHHHHHHHCCCEEEEEeccc
Confidence 126788999999999999999995
No 245
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=73.70 E-value=9.6 Score=33.75 Aligned_cols=83 Identities=17% Similarity=0.132 Sum_probs=50.8
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCC--CCHHHHhhcccCCCCCeeEEEeccCcccchHHHH
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT--IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFI 135 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~t--fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~ 135 (246)
+++++.+...|. .+.++.++++|+|+||+- .++....++ -..+.++++++ ++|+-+==-+.+|+...+.+.
T Consensus 131 vKir~G~~~~~~---~~~a~~l~~~G~d~i~v~--g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~ 203 (318)
T 1vhn_A 131 VKTRLGWEKNEV---EEIYRILVEEGVDEVFIH--TRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALE 203 (318)
T ss_dssp EEEESCSSSCCH---HHHHHHHHHTTCCEEEEE--SSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHH
T ss_pred EEecCCCChHHH---HHHHHHHHHhCCCEEEEc--CCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHH
Confidence 456654433332 277888999999999984 222211111 11256777776 566544334567777776666
Q ss_pred hcCCCEEEEccC
Q 025927 136 KAGADIVSVHCE 147 (246)
Q Consensus 136 ~agad~It~H~E 147 (246)
+.|||.|.+=--
T Consensus 204 ~~gad~V~iGR~ 215 (318)
T 1vhn_A 204 ESGCDGLLVARG 215 (318)
T ss_dssp HHCCSEEEESGG
T ss_pred cCCCCEEEECHH
Confidence 689999988533
No 246
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=73.59 E-value=12 Score=32.41 Aligned_cols=87 Identities=14% Similarity=0.118 Sum_probs=58.0
Q ss_pred hccc-CCCCCeeEEEeccCcccchHHH---Hh-cCCCEEEEccCCcc-----------cccHHHHHHHHHHc-CCcEEEE
Q 025927 109 ALRP-VTDLPLDVHLMIVEPEQRVPDF---IK-AGADIVSVHCEQSS-----------TIHLHRTLNQIKDL-GAKAGVV 171 (246)
Q Consensus 109 ~ir~-~t~~plDvHLMV~~P~~~i~~~---~~-agad~It~H~E~~~-----------~~~~~~~i~~Ik~~-G~k~GlA 171 (246)
.+++ .++.|+-+.|...+|+.|.+.. .+ +|+|.|-+|+-.-. ...+.++++.+|+. ++.+.+-
T Consensus 91 ~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk 170 (311)
T 1ep3_A 91 WLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVK 170 (311)
T ss_dssp HHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3454 4578899999988888766533 34 78999999874200 11237888889887 8888888
Q ss_pred EcCCC-C-hHHHHHhhhh-cceEEEEe
Q 025927 172 LNPAT-S-LSAIECVLDV-VDLVLIMS 195 (246)
Q Consensus 172 lnP~T-p-ve~l~~~l~~-vD~VLvMs 195 (246)
+.|+. . .+..+.+.+. +|.|.+-.
T Consensus 171 ~~~~~~~~~~~a~~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 171 LSPNVTDIVPIAKAVEAAGADGLTMIN 197 (311)
T ss_dssp ECSCSSCSHHHHHHHHHTTCSEEEECC
T ss_pred ECCChHHHHHHHHHHHHcCCCEEEEeC
Confidence 88763 2 3434444332 89888743
No 247
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=73.53 E-value=13 Score=31.39 Aligned_cols=105 Identities=13% Similarity=0.158 Sum_probs=60.4
Q ss_pred CcccchHHHHhcCCCEEEEccCCc---------ccccHHHHHHHHHHcCCcEE-EEEc------CCCC--------hHHH
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQS---------STIHLHRTLNQIKDLGAKAG-VVLN------PATS--------LSAI 181 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~~---------~~~~~~~~i~~Ik~~G~k~G-lAln------P~Tp--------ve~l 181 (246)
.++..++...++|.+.|-+..... ....+.++.+.++++|+++- +... +..+ ++.+
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~ 110 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIM 110 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHH
Confidence 455677788888999888875421 11335677788889999874 4432 2221 2344
Q ss_pred HHhhhh-----cceEEEEeecCCCC---CC---cccHHHHHHHHHHHHHHHhcCCCCeEEEeCC
Q 025927 182 ECVLDV-----VDLVLIMSVNPGFG---GQ---SFIESQVKKISDLRRMCLEKGVNPWIEVDGG 234 (246)
Q Consensus 182 ~~~l~~-----vD~VLvMsV~PGfg---GQ---~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGG 234 (246)
+..++. ++.|.+. |+. +. .......+.++++-++..+.|..+-+|-..+
T Consensus 111 ~~~i~~A~~lG~~~v~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 170 (295)
T 3cqj_A 111 RKAIQFAQDVGIRVIQLA----GYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDY 170 (295)
T ss_dssp HHHHHHHHHHTCCEEEEC----CCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSS
T ss_pred HHHHHHHHHcCCCEEEEC----CCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCC
Confidence 544443 4555432 322 11 1223445566666677777777766776554
No 248
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=73.49 E-value=46 Score=29.64 Aligned_cols=121 Identities=12% Similarity=0.164 Sum_probs=65.1
Q ss_pred HHHhhcccCCCCCeeEEEec-cCcccchHHHHhcC--CCEEEEccCCcccccHHHHHHHHHHc--CCcEEEEEcCCCChH
Q 025927 105 LVVDALRPVTDLPLDVHLMI-VEPEQRVPDFIKAG--ADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLS 179 (246)
Q Consensus 105 ~~I~~ir~~t~~plDvHLMV-~~P~~~i~~~~~ag--ad~It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve 179 (246)
.+++.+++ .++++-+-+.. .++.+.++.+.++| ++.|.++.-.-......+.++++|+. +..+..- .-++.+
T Consensus 85 ~~i~~~~~-~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G--~v~s~e 161 (336)
T 1ypf_A 85 SFIRDMQS-RGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAG--NVGTPE 161 (336)
T ss_dssp HHHHHHHH-TTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEE--EECSHH
T ss_pred HHHHHHHh-cCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEEC--CcCCHH
Confidence 34555443 24455444432 12224466778888 99998865210112355788888877 4444321 135677
Q ss_pred HHHHhhhh-cceEEEEeecCCCCCCcccH--H--------HHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 180 AIECVLDV-VDLVLIMSVNPGFGGQSFIE--S--------QVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 180 ~l~~~l~~-vD~VLvMsV~PGfgGQ~F~~--~--------~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
..+.+.+. +|.|.+ +--+|. .+.. . +++-+.++++ .. ++.|..||||..
T Consensus 162 ~A~~a~~aGad~Ivv-s~hgG~---~~~~~~~~~~g~~g~~~~~l~~v~~---~~--~ipVIa~GGI~~ 221 (336)
T 1ypf_A 162 AVRELENAGADATKV-GIGPGK---VCITKIKTGFGTGGWQLAALRWCAK---AA--SKPIIADGGIRT 221 (336)
T ss_dssp HHHHHHHHTCSEEEE-CSSCST---TCHHHHHHSCSSTTCHHHHHHHHHH---TC--SSCEEEESCCCS
T ss_pred HHHHHHHcCCCEEEE-ecCCCc---eeecccccCcCCchhHHHHHHHHHH---Hc--CCcEEEeCCCCC
Confidence 77777664 999888 322321 1110 0 2333333333 22 467889999974
No 249
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=73.32 E-value=23 Score=30.75 Aligned_cols=116 Identities=10% Similarity=0.219 Sum_probs=70.7
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEec-----cCcccchHHHHhcCCC
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMI-----VEPEQRVPDFIKAGAD 140 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV-----~~P~~~i~~~~~agad 140 (246)
.++.-+.++++.+.+.|+|-+=+=+-+ ++-.+..+.++.|-+. -++++..|--. .+|..-++.+++.|++
T Consensus 73 ~E~~~M~~Di~~~~~~GadGvV~G~Lt----~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~ 148 (224)
T 2bdq_A 73 LELRIMEEDILRAVELESDALVLGILT----SNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFT 148 (224)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCBC----TTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeEC----CCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCC
Confidence 356677789999999999988775554 4556666667666442 35777788764 6777788888888888
Q ss_pred EEEEccCCc---ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 141 IVSVHCEQS---STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 141 ~It~H~E~~---~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
+|--|==.. ..+.+..+-+.+++.+-+.-|..--+-..+.+..+++
T Consensus 149 rILTSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l~~ 197 (224)
T 2bdq_A 149 RILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQ 197 (224)
T ss_dssp EEEECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSCCTTTHHHHHH
T ss_pred EEECCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCCCHHHHHHHHH
Confidence 888772110 1122333333334444344444444444455555543
No 250
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=73.05 E-value=4.4 Score=36.35 Aligned_cols=109 Identities=12% Similarity=0.151 Sum_probs=72.0
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEec--cCcccchHHHHhcCCCEEEEc
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMI--VEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV--~~P~~~i~~~~~agad~It~H 145 (246)
.+...-+..+.++++|+|.+ |++... .++.++.+.+..++|+-+-++. ..|..-.+.|.+.|+++|++.
T Consensus 165 gl~~ai~ra~ay~eAGAd~i--------~~e~~~-~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~ 235 (295)
T 1xg4_A 165 GLDAAIERAQAYVEAGAEML--------FPEAIT-ELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYP 235 (295)
T ss_dssp CHHHHHHHHHHHHHTTCSEE--------EETTCC-SHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHHHHHcCCCEE--------EEeCCC-CHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEC
Confidence 34556677788889999865 555431 3677888876556887665554 457777899999999999997
Q ss_pred cCCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 146 CEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 146 ~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
.-.. +..-..+.++.|++.|-..++. ..-.+.+++..++.
T Consensus 236 ~~~~~aa~~a~~~~~~~i~~~g~~~~~~-~~~~~~~e~~~l~~ 277 (295)
T 1xg4_A 236 LSAFRAMNRAAEHVYNVLRQEGTQKSVI-DTMQTRNELYESIN 277 (295)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSSSGGGG-GGSCCHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCccccc-ccCCCHHHHHHHcC
Confidence 6421 1223567788888888543321 11146666666653
No 251
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=72.88 E-value=8.1 Score=35.15 Aligned_cols=121 Identities=20% Similarity=0.272 Sum_probs=74.4
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCccc-----CCC-----C----------CCHHHHhhcccCC--CCCeeEEEec-----
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFV-----PNI-----T----------IGPLVVDALRPVT--DLPLDVHLMI----- 124 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN~-----t----------fgp~~I~~ir~~t--~~plDvHLMV----- 124 (246)
+.+..+++.++|.|.+-+..--|... |+. . |--++|+++|+.. ++|+-+=|=.
T Consensus 160 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~ 239 (363)
T 3l5l_A 160 FVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDG 239 (363)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSS
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCC
Confidence 33445666788999988877655332 321 2 3367899999865 4566665532
Q ss_pred ------cCcccchHHHHhcCCCEEEEccCCc--------ccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh--
Q 025927 125 ------VEPEQRVPDFIKAGADIVSVHCEQS--------STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV-- 187 (246)
Q Consensus 125 ------~~P~~~i~~~~~agad~It~H~E~~--------~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~-- 187 (246)
++...+++.+.++|+|+|.+|.-.. .......+++.+|+.- +.=|..+-+ ++.+..+.+|..
T Consensus 240 ~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 240 RDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQ 318 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCC
Confidence 2334567778889999999985210 0111235677777642 222444444 578888888865
Q ss_pred cceEEE
Q 025927 188 VDLVLI 193 (246)
Q Consensus 188 vD~VLv 193 (246)
+|+|.+
T Consensus 319 aD~V~i 324 (363)
T 3l5l_A 319 LDLVSV 324 (363)
T ss_dssp CSEEEC
T ss_pred ccEEEe
Confidence 898764
No 252
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.54 E-value=18 Score=30.99 Aligned_cols=125 Identities=14% Similarity=0.184 Sum_probs=72.8
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
.+-.=+|..|+.+ .++.+.++|+|++++=..- +.+ + -...++.+|+. +...=+=|-...|...++.+.+ +
T Consensus 59 ~~dvhLmv~dp~~---~i~~~~~aGAd~itvh~Ea--~~~--~-~~~~i~~i~~~-G~k~gv~lnp~tp~~~~~~~l~-~ 128 (231)
T 3ctl_A 59 PLDCHLMVTRPQD---YIAQLARAGADFITLHPET--ING--Q-AFRLIDEIRRH-DMKVGLILNPETPVEAMKYYIH-K 128 (231)
T ss_dssp CEEEEEESSCGGG---THHHHHHHTCSEEEECGGG--CTT--T-HHHHHHHHHHT-TCEEEEEECTTCCGGGGTTTGG-G
T ss_pred cEEEEEEecCHHH---HHHHHHHcCCCEEEECccc--CCc--c-HHHHHHHHHHc-CCeEEEEEECCCcHHHHHHHHh-c
Confidence 4566677778755 4677788999999664322 011 1 14678888875 5544444544566667766665 7
Q ss_pred CCEEE---EccCCcc---ccc----HHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEE
Q 025927 139 ADIVS---VHCEQSS---TIH----LHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 139 ad~It---~H~E~~~---~~~----~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLv 193 (246)
+|+|. +|+-... .+. +.++-+.+.+.|..+=|.+.-+-..+.+..+++. +|.+.+
T Consensus 129 ~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~ 194 (231)
T 3ctl_A 129 ADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIV 194 (231)
T ss_dssp CSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEE
T ss_pred CCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 99986 4442100 111 2222233333555555666667667777777654 777554
No 253
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=72.52 E-value=12 Score=30.93 Aligned_cols=131 Identities=15% Similarity=0.135 Sum_probs=69.7
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCee-EEEec--cCcc------
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD-VHLMI--VEPE------ 128 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plD-vHLMV--~~P~------ 128 (246)
++++-|-.+..-..+++.++.+.+.|.+.+-+-..+.+..+. ....+.++++-+-.++.+. +|.-. ..|.
T Consensus 4 Mk~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (281)
T 3u0h_A 4 MEPCLHPTLVDETSLVLYLDLARETGYRYVDVPFHWLEAEAE-RHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRE 82 (281)
T ss_dssp CEEEECGGGTTCCCHHHHHHHHHHTTCSEECCCHHHHHHHHH-HHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHH
T ss_pred chhhhcchhccCCCHHHHHHHHHHcCCCEEEecHHHHHHHhc-ccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHH
Confidence 345555555666788999999999999998887655321100 1123334443333455443 33211 1121
Q ss_pred -----cchHHHHhcCCCEEEEccCCcc-----------cccHHHHHHHHHHcCCcEEEEEcC-----------CCChHHH
Q 025927 129 -----QRVPDFIKAGADIVSVHCEQSS-----------TIHLHRTLNQIKDLGAKAGVVLNP-----------ATSLSAI 181 (246)
Q Consensus 129 -----~~i~~~~~agad~It~H~E~~~-----------~~~~~~~i~~Ik~~G~k~GlAlnP-----------~Tpve~l 181 (246)
+.++...+.|+.+|.+|+-... .+.+.++....++.|++.++=-.+ -.+.+.+
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~ 162 (281)
T 3u0h_A 83 LSLLPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSLADL 162 (281)
T ss_dssp HHTHHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCHHHH
Confidence 1344445579998885532100 112334455556778776664332 1244556
Q ss_pred HHhhhhcc
Q 025927 182 ECVLDVVD 189 (246)
Q Consensus 182 ~~~l~~vD 189 (246)
..+++.+|
T Consensus 163 ~~l~~~v~ 170 (281)
T 3u0h_A 163 KTFWEAIG 170 (281)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 66666654
No 254
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=72.17 E-value=12 Score=32.14 Aligned_cols=126 Identities=10% Similarity=0.008 Sum_probs=67.9
Q ss_pred cEEeeeecccC----hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCCCeeEEEe------c
Q 025927 58 IIVSPSILSAN----FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDLPLDVHLM------I 124 (246)
Q Consensus 58 ~~IsPSIl~aD----~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~plDvHLM------V 124 (246)
++|+.+.++.- ...+.+ ++.+.+.|.+.+-+-.-+... +.+..++++++ ..++.+..|.- .
T Consensus 21 mklg~~~~~~~~~~~~~~l~~-l~~~~~~G~~~vEl~~~~~~~-----~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l 94 (309)
T 2hk0_A 21 MKHGIYYSYWEHEWSAKFGPY-IEKVAKLGFDIIEVAAHHINE-----YSDAELATIRKSAKDNGIILTAGIGPSKTKNL 94 (309)
T ss_dssp CEEEEEGGGGCSCTTSCSHHH-HHHHHHTTCSEEEEEHHHHTT-----SCHHHHHHHHHHHHHTTCEEEEECCCCSSSCS
T ss_pred ceeEEehhhcccccccccHHH-HHHHHHhCCCEEEeccCCccc-----cchhhHHHHHHHHHHcCCeEEEecCCCCCCCC
Confidence 35555555542 246788 999999999998886543221 11234444433 35677766631 1
Q ss_pred c--Ccc----------cchHHHHhcCCCEEEEcc----CC------cc-------cccHHHHHHHHHHcCCcEEEEEcC-
Q 025927 125 V--EPE----------QRVPDFIKAGADIVSVHC----EQ------SS-------TIHLHRTLNQIKDLGAKAGVVLNP- 174 (246)
Q Consensus 125 ~--~P~----------~~i~~~~~agad~It~H~----E~------~~-------~~~~~~~i~~Ik~~G~k~GlAlnP- 174 (246)
. +|. +.++...+.|+..|..|. -. .. .+.+.++....++.|++.++=-.+
T Consensus 95 ~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~ 174 (309)
T 2hk0_A 95 SSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNR 174 (309)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeeccc
Confidence 1 222 233344557999998774 10 00 012334455566778776654331
Q ss_pred --C---CChHHHHHhhhhcc
Q 025927 175 --A---TSLSAIECVLDVVD 189 (246)
Q Consensus 175 --~---Tpve~l~~~l~~vD 189 (246)
. ...+.+..+++.+|
T Consensus 175 ~~~~~~~~~~~~~~l~~~v~ 194 (309)
T 2hk0_A 175 FENHVLNTAAEGVAFVKDVG 194 (309)
T ss_dssp TTCSSCCSHHHHHHHHHHHT
T ss_pred ccccccCCHHHHHHHHHHcC
Confidence 1 23455566666554
No 255
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=72.14 E-value=18 Score=32.77 Aligned_cols=144 Identities=17% Similarity=0.185 Sum_probs=88.1
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeecc---CcccCCCCCCHHHHhhcccC-CCCCeeEEE-e-----c--c---------
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMD---GRFVPNITIGPLVVDALRPV-TDLPLDVHL-M-----I--V--------- 125 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMD---G~FVpN~tfgp~~I~~ir~~-t~~plDvHL-M-----V--~--------- 125 (246)
.-+..+.++..++.++|+..+|+-+-| |.-..+...--++++.||+. +++.+-+=- | . .
T Consensus 45 vTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~~d~ii~~TTg~gg~~~g~~~~p~~~~~~~ 124 (316)
T 3c6c_A 45 ITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALPES 124 (316)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECTTC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCccccccCcccCcccccccc
Confidence 446788899999999999999999987 33333333334677888875 665443322 1 1 1
Q ss_pred ---CcccchHHHHhcCCCEEEEccCCc-------------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--
Q 025927 126 ---EPEQRVPDFIKAGADIVSVHCEQS-------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-- 187 (246)
Q Consensus 126 ---~P~~~i~~~~~agad~It~H~E~~-------------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-- 187 (246)
.++.-+..+.+...|+.|+-.=+. +...+.++++.++++|+|+-+-+---.-+..+..|++.
T Consensus 125 ~l~~~eeR~~~~~~~~Pe~aSl~~Gs~Nf~~~~~~~v~~n~~~~i~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~Gl 204 (316)
T 3c6c_A 125 DVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFVYLNTTRTLRAMARRFQELGIKPELEVFSPGDILFGKQLIEEGL 204 (316)
T ss_dssp EECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHhcCCCeEEeccccccccCCCCceeecCCHHHHHHHHHHHHHcCCeEEEEEECHHHHHHHHHHHHcCC
Confidence 233333333344677774432211 12357899999999999999888744444556666532
Q ss_pred ----cceEEEEeecCCCCCCcccHHHHHHH
Q 025927 188 ----VDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 188 ----vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
.-+-+||.| || |++-.|+.+.-.
T Consensus 205 l~~p~~~~~vlGv-~~--g~p~~p~~L~~~ 231 (316)
T 3c6c_A 205 IDGVPLFQMVLGV-LW--GAPASTETMIYQ 231 (316)
T ss_dssp SCSSCEEEEECSC-TT--SCCSCHHHHHHH
T ss_pred CCCCceEEEEEec-CC--CCCCCHHHHHHH
Confidence 344556765 32 666667666543
No 256
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=71.96 E-value=41 Score=34.55 Aligned_cols=132 Identities=17% Similarity=0.116 Sum_probs=83.5
Q ss_pred cEEeeeecc-cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCC--------------CCCHHHHhhcccCCCCCeeEEE
Q 025927 58 IIVSPSILS-ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI--------------TIGPLVVDALRPVTDLPLDVHL 122 (246)
Q Consensus 58 ~~IsPSIl~-aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~--------------tfgp~~I~~ir~~t~~plDvHL 122 (246)
..+-.+++. .|...+.+.++.++++|+|.|-+.+- .||. .+-.++++++|+.+++|+-+=+
T Consensus 635 ~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~----~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~ 710 (1025)
T 1gte_A 635 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLS----CPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKL 710 (1025)
T ss_dssp SEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC----CBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECC----CCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEe
Confidence 456677764 47888888899999999999999864 2432 1123478888887888988876
Q ss_pred ecc--CcccchHHHHhcCCCEEEE----------------------ccCCc----cc-cc---HHHHHHHHHHcCCcEEE
Q 025927 123 MIV--EPEQRVPDFIKAGADIVSV----------------------HCEQS----ST-IH---LHRTLNQIKDLGAKAGV 170 (246)
Q Consensus 123 MV~--~P~~~i~~~~~agad~It~----------------------H~E~~----~~-~~---~~~~i~~Ik~~G~k~Gl 170 (246)
.-. +...+.+.+.++|+|.|++ |.... +. .. ..+.+..+++.--++=|
T Consensus 711 ~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipv 790 (1025)
T 1gte_A 711 TPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPI 790 (1025)
T ss_dssp CSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCE
T ss_pred CCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCE
Confidence 432 2234566778899999999 33111 00 11 13577777765212223
Q ss_pred EEcCC-CChHHHHHhhh-hcceEEE
Q 025927 171 VLNPA-TSLSAIECVLD-VVDLVLI 193 (246)
Q Consensus 171 AlnP~-Tpve~l~~~l~-~vD~VLv 193 (246)
..+=+ ++.++..++|. -+|.|.+
T Consensus 791 i~~GGI~s~~da~~~l~~Ga~~v~v 815 (1025)
T 1gte_A 791 LATGGIDSAESGLQFLHSGASVLQV 815 (1025)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred EEecCcCCHHHHHHHHHcCCCEEEE
Confidence 33333 45566666654 4888877
No 257
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=71.95 E-value=38 Score=30.03 Aligned_cols=126 Identities=14% Similarity=0.154 Sum_probs=67.5
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc-CCCEEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA-GADIVSV 144 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a-gad~It~ 144 (246)
..|+..+++.++.+.+.|++.+=+ =|+--...++..+.-+++- +..++. |---|..
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~Gl~v---~GtTGE~~~Lt~~Er~~v~--------------------~~~v~~~grvpVia 81 (313)
T 3dz1_A 25 KIDDVSIDRLTDFYAEVGCEGVTV---LGILGEAPKLDAAEAEAVA--------------------TRFIKRAKSMQVIV 81 (313)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEE---STGGGTGGGSCHHHHHHHH--------------------HHHHHHCTTSEEEE
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEe---CccCcChhhCCHHHHHHHH--------------------HHHHHHcCCCcEEE
Confidence 689999999999999999987743 3333333555555443331 111221 2223444
Q ss_pred ccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh--HHH----HHhhhhcc--eEEEEeecCCCCCCcccHHHHHHHH
Q 025927 145 HCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL--SAI----ECVLDVVD--LVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 145 H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv--e~l----~~~l~~vD--~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
+.=+.++.+..+..+..++.|+.+-+++.|.... +.+ +.+.+.++ +=+++==.|+..|..+.++++.|+.
T Consensus 82 Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 82 GVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIV 159 (313)
T ss_dssp ECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHH
Confidence 4432233444455556666676666666655321 222 22233344 3223333466667777776665554
No 258
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=71.93 E-value=19 Score=29.77 Aligned_cols=116 Identities=13% Similarity=0.126 Sum_probs=66.2
Q ss_pred HHHHHHHHHHcCCCEEEeeec--cCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEE---EEcc
Q 025927 72 LGEQVKAVELAGCDWIHVDVM--DGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV---SVHC 146 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIM--DG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~I---t~H~ 146 (246)
..+.++.+.++|+|.+|+... .+ +. -.+.++.+++. ++.+-+=+....|...++.+. .++|+| +++.
T Consensus 80 ~~~~v~~~~~~Gad~v~vh~~~~~~---~~---~~~~~~~~~~~-g~~ig~~~~p~t~~e~~~~~~-~~~d~vl~~~~~p 151 (230)
T 1rpx_A 80 PDQRVPDFIKAGADIVSVHCEQSST---IH---LHRTINQIKSL-GAKAGVVLNPGTPLTAIEYVL-DAVDLVLIMSVNP 151 (230)
T ss_dssp HHHHHHHHHHTTCSEEEEECSTTTC---SC---HHHHHHHHHHT-TSEEEEEECTTCCGGGGTTTT-TTCSEEEEESSCT
T ss_pred HHHHHHHHHHcCCCEEEEEecCccc---hh---HHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHH-hhCCEEEEEEEcC
Confidence 346788888999999988765 33 11 14677777764 443333232345555555543 578999 6653
Q ss_pred CCcc---cccHHHHHHHHHH----cCCcEEEEEcCCCChHHHHHhhh-hcceEEEEe
Q 025927 147 EQSS---TIHLHRTLNQIKD----LGAKAGVVLNPATSLSAIECVLD-VVDLVLIMS 195 (246)
Q Consensus 147 E~~~---~~~~~~~i~~Ik~----~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMs 195 (246)
=... .......++++|+ .|...-+.+-.+-..+.+.+++. -+|.|.+-|
T Consensus 152 g~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgS 208 (230)
T 1rpx_A 152 GFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGS 208 (230)
T ss_dssp TCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 1100 1122333454543 23344566666666677767666 488877644
No 259
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=71.77 E-value=38 Score=29.89 Aligned_cols=126 Identities=18% Similarity=0.177 Sum_probs=79.5
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+ =|+--...++..+.-+++ ++..++. |---|.
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v---~GttGE~~~Lt~~Er~~v--------------------~~~~~~~~~grvpvi 88 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVV---SGTTGESPTTTDGEKIEL--------------------LRAVLEAVGDRARVI 88 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEE---SSTTTTGGGSCHHHHHHH--------------------HHHHHHHHTTTSEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEe---CccccchhhCCHHHHHHH--------------------HHHHHHHhCCCCeEE
Confidence 689999999999999999987733 333333355555544333 2222221 222455
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHH----HHhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAI----ECVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l----~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+ +.+.+.+|+=+++-=.|+..|..+.++++.++.
T Consensus 89 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 89 AGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 665433345566677777888888888888762 22333 333444566455555688889999999887775
No 260
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=71.71 E-value=22 Score=29.96 Aligned_cols=132 Identities=10% Similarity=0.031 Sum_probs=66.2
Q ss_pred cEEeeeeccc-ChhhHHHHHHHHHHcCCCEEEeeeccCc-ccCCCCCCHHHHhhcccC---CCCCee-EEEe--------
Q 025927 58 IIVSPSILSA-NFAKLGEQVKAVELAGCDWIHVDVMDGR-FVPNITIGPLVVDALRPV---TDLPLD-VHLM-------- 123 (246)
Q Consensus 58 ~~IsPSIl~a-D~~~l~~~i~~l~~~g~d~lHiDIMDG~-FVpN~tfgp~~I~~ir~~---t~~plD-vHLM-------- 123 (246)
..++-...+. +...+.+.++.+.+.|.+.+-+..-+.. ++....+.+..++++++. .++.+. +|.-
T Consensus 17 ~~~gi~~~~~~~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~ 96 (295)
T 3cqj_A 17 IPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLG 96 (295)
T ss_dssp CCEEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTT
T ss_pred ccceeeeecCCCCCCHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCC
Confidence 3344444444 2356788888888888888777543321 111123345555555442 355443 3431
Q ss_pred ccCcc----------cchHHHHhcCCCEEEEccCCc----c--------cccHHHHHHHHHHcCCcEEEEEcCC---CCh
Q 025927 124 IVEPE----------QRVPDFIKAGADIVSVHCEQS----S--------TIHLHRTLNQIKDLGAKAGVVLNPA---TSL 178 (246)
Q Consensus 124 V~~P~----------~~i~~~~~agad~It~H~E~~----~--------~~~~~~~i~~Ik~~G~k~GlAlnP~---Tpv 178 (246)
..+|. +.++...+.|++.|.+|.-.. . .+.+.++.+..++.|++.++=-.+. ...
T Consensus 97 ~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~ 176 (295)
T 3cqj_A 97 SEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSI 176 (295)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCH
Confidence 11221 233333556888888873110 0 0123445555667777755544333 234
Q ss_pred HHHHHhhhhcc
Q 025927 179 SAIECVLDVVD 189 (246)
Q Consensus 179 e~l~~~l~~vD 189 (246)
+.+..+++.+|
T Consensus 177 ~~~~~l~~~v~ 187 (295)
T 3cqj_A 177 SKALGYAHYLN 187 (295)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 55555555553
No 261
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=71.60 E-value=43 Score=27.83 Aligned_cols=106 Identities=10% Similarity=0.016 Sum_probs=66.6
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
++++...++|+|.+|..- +.++.++..++ .+.++-. =+.+|.... .-.+.|+|+|.+|... ..-
T Consensus 74 d~~~~A~~~GAd~v~~~~----------~d~~v~~~~~~-~g~~~i~--G~~t~~e~~-~A~~~Gad~v~~fpa~--~~g 137 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG----------LLEEVAALAQA-RGVPYLP--GVLTPTEVE-RALALGLSALKFFPAE--PFQ 137 (207)
T ss_dssp HHHHHHHHHTCSEEEESS----------CCHHHHHHHHH-HTCCEEE--EECSHHHHH-HHHHTTCCEEEETTTT--TTT
T ss_pred HHHHHHHHcCCCEEEcCC----------CCHHHHHHHHH-hCCCEEe--cCCCHHHHH-HHHHCCCCEEEEecCc--ccc
Confidence 788888899999999432 23567777665 3444322 256777654 4457799999998742 110
Q ss_pred HHHHHHHHHHcC-CcEEEEEcCCCChHHHHHhhhh-cceEEEEee
Q 025927 154 LHRTLNQIKDLG-AKAGVVLNPATSLSAIECVLDV-VDLVLIMSV 196 (246)
Q Consensus 154 ~~~~i~~Ik~~G-~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMsV 196 (246)
-...++.+++.- -..=+++- +-..+.+.+|+.. +|.|-+-|-
T Consensus 138 G~~~lk~l~~~~~~ipvvaiG-GI~~~n~~~~l~aGa~~vavgSa 181 (207)
T 2yw3_A 138 GVRVLRAYAEVFPEVRFLPTG-GIKEEHLPHYAALPNLLAVGGSW 181 (207)
T ss_dssp HHHHHHHHHHHCTTCEEEEBS-SCCGGGHHHHHTCSSBSCEEESG
T ss_pred CHHHHHHHHhhCCCCcEEEeC-CCCHHHHHHHHhCCCcEEEEehh
Confidence 124567777532 22223443 4456888888874 888877663
No 262
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=71.58 E-value=18 Score=30.16 Aligned_cols=92 Identities=23% Similarity=0.223 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHcCCCEEEe-ee-ccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCC
Q 025927 71 KLGEQVKAVELAGCDWIHV-DV-MDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHi-DI-MDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~ 148 (246)
...+.++.+++.|++.+=+ ++ -||.+ .++..+.++++++.+++|+-+===+.+|++.. .+.++|+|.+.+= .+
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~---~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~-~~~~~Gadgv~vG-sa 226 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRDGTK---SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFL-EAFLAGADAALAA-SV 226 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTSC---SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHH-HHHHTTCSEEEES-HH
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCCCCC---CCCCHHHHHHHHHhcCCCEEEECCCCCHHHHH-HHHHcCChHHHHH-HH
Confidence 4567788888999997765 22 13433 34568899999987778876655566776654 5557999988763 11
Q ss_pred c--ccccHHHHHHHHHHcCCc
Q 025927 149 S--STIHLHRTLNQIKDLGAK 167 (246)
Q Consensus 149 ~--~~~~~~~~i~~Ik~~G~k 167 (246)
+ ...++.+.++++++.|+.
T Consensus 227 l~~~~~~~~~~~~~l~~~g~~ 247 (253)
T 1thf_D 227 FHFREIDVRELKEYLKKHGVN 247 (253)
T ss_dssp HHTTCSCHHHHHHHHHHTTCC
T ss_pred HHcCCCCHHHHHHHHHHcCCc
Confidence 1 122678888888888764
No 263
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=71.33 E-value=22 Score=31.51 Aligned_cols=147 Identities=14% Similarity=0.163 Sum_probs=79.2
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCC---CCCC------HHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN---ITIG------PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN---~tfg------p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
.++...-+..+++.+.|+|.|=+=..-. -|. ++-. -+.|+.+++. +.|+.+ =+.+|+- ++.-.++
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgest--rpga~~v~~~eE~~Rv~pvi~~l~~~-~~piSI--DT~~~~v-a~aAl~a 99 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESS--RPGATRVDPAVETSRVIPVVKELAAQ-GITVSI--DTMRADV-ARAALQN 99 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC----------------HHHHHHHHHHHHHT-TCCEEE--ECSCHHH-HHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccC--CCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEE--eCCCHHH-HHHHHHc
Confidence 4566777778888899999875542110 121 1100 2244555543 566544 3556654 5566778
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCC-----------------hHHHHHhhhh-----cc--eEEE
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS-----------------LSAIECVLDV-----VD--LVLI 193 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-----------------ve~l~~~l~~-----vD--~VLv 193 (246)
|+++|- ++-.. ..+ .+++..++++|+.+-+.-..++| .+.++..++. ++ .
T Consensus 100 Ga~iIN-dvsg~-~~d-~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~--- 173 (280)
T 1eye_A 100 GAQMVN-DVSGG-RAD-PAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPAR--- 173 (280)
T ss_dssp TCCEEE-ETTTT-SSC-TTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGG---
T ss_pred CCCEEE-ECCCC-CCC-HHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhh---
Confidence 998874 22211 111 24677778899877666653332 2222222221 22 2
Q ss_pred EeecCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 025927 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVN 226 (246)
Q Consensus 194 MsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~ 226 (246)
.-++||+|=-+-....++-++.++++.. .|+.
T Consensus 174 IilDPg~Gf~k~~~~n~~ll~~l~~~~~-~g~P 205 (280)
T 1eye_A 174 LVLDPGLGFAKTAQHNWAILHALPELVA-TGIP 205 (280)
T ss_dssp EEEECCTTSSCCHHHHHHHHHTHHHHHT-TSSC
T ss_pred EEEECCCCcccCHHHHHHHHHHHHHhhc-CCCC
Confidence 2358988755556677777777776653 4444
No 264
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=71.26 E-value=26 Score=31.23 Aligned_cols=126 Identities=17% Similarity=0.128 Sum_probs=71.9
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+= .=|+--...++..+.-+++- +..++. |---|.
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~---v~GtTGE~~~Ls~~Er~~v~--------------------~~~v~~~~grvpVi 96 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIV---AVGTTGESATLDVEEHIQVI--------------------RRVVDQVKGRIPVI 96 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEE---ESSGGGTGGGCCHHHHHHHH--------------------HHHHHHHTTSSCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEE---ECccccChhhCCHHHHHHHH--------------------HHHHHHhCCCCcEE
Confidence 68999999999999999999773 34444444566665444432 111221 212244
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|+.+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 97 aGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 97 AGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 454332344455566666677777777776641 112222 22344555344444577777777777776654
No 265
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=71.20 E-value=29 Score=30.36 Aligned_cols=126 Identities=19% Similarity=0.222 Sum_probs=70.8
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+ +.=|+--...++..+.-+++ ++..++. |---|.
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl---~~~GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~gr~pvi 74 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQGTNSI---VAVGTTGEASTLSMEEHTQV--------------------IKEIIRVANKRIPII 74 (291)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEE---EESSTTTTGGGSCHHHHHHH--------------------HHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHHHHHHHHCCCCEE---EECccccccccCCHHHHHHH--------------------HHHHHHHhCCCCeEE
Confidence 6899999999999999999877 33344444455555544333 2222221 212344
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.|.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 75 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3tak_A 75 AGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLA 152 (291)
T ss_dssp EECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred EeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHH
Confidence 454332344455566666677777777776652 122222 22333454333444577777777777766553
No 266
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=70.95 E-value=19 Score=34.09 Aligned_cols=144 Identities=15% Similarity=0.187 Sum_probs=83.1
Q ss_pred CCcEEeeeecc-cChhhHHHHHHHHHHc----CCCEEEeeeccCcccCCCCCCHH----HHhhcccCCCCCeeEEEeccC
Q 025927 56 SDIIVSPSILS-ANFAKLGEQVKAVELA----GCDWIHVDVMDGRFVPNITIGPL----VVDALRPVTDLPLDVHLMIVE 126 (246)
Q Consensus 56 ~~~~IsPSIl~-aD~~~l~~~i~~l~~~----g~d~lHiDIMDG~FVpN~tfgp~----~I~~ir~~t~~plDvHLMV~~ 126 (246)
+...|.--|.. .+-..+.+.++.+.+. ....+-.|+-+=+| .+-.|+ .++.+++.++.|+-+= .|
T Consensus 90 np~~ia~eI~D~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~---~~~dpe~~~~~Vk~V~e~~dvPlsID---~d 163 (445)
T 2h9a_A 90 HPCGLAILVEDTLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKG---SSQDAATFAKAVATAREVTDLPFILI---GT 163 (445)
T ss_dssp SCCEEEEEEETTSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEEC---TTCCHHHHHHHHHHHHHHCCSCEEEE---SC
T ss_pred CCCeEEEEEecCCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeC---CCCCHHHHHHHHHHHHHhcCCCEEEE---CC
Confidence 35566666654 2223444444442211 12333455555444 233344 4555667788887665 78
Q ss_pred cccchHHHHhcCCC---EE-EEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-----cceEEEEeec
Q 025927 127 PEQRVPDFIKAGAD---IV-SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-----VDLVLIMSVN 197 (246)
Q Consensus 127 P~~~i~~~~~agad---~I-t~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-----vD~VLvMsV~ 197 (246)
|+. ++.-.++|++ +| ++..| +...+...+++.|..+.+ +.+ .++.+++++.. ++-|. ++
T Consensus 164 p~v-leaale~~~d~~pLIns~t~e-----n~~~~~~la~~y~~~vV~-~~~--~l~~l~~lv~~a~~~Gi~~Ii---LD 231 (445)
T 2h9a_A 164 PEQ-LAAALETEGANNPLLYAATAD-----NYEQMVELAKKYNVPLTV-SAK--GLDALAELVQKITALGYKNLI---LD 231 (445)
T ss_dssp HHH-HHHHHHHHGGGCCEEEEECTT-----THHHHHHHHHHHTCCEEE-ECS--SHHHHHHHHHHHHHTTCCCEE---EE
T ss_pred HHH-HHHHHHhcCCCCCEEEECCHH-----HHHHHHHHHHHhCCeEEE-EcC--CHHHHHHHHHHHHHCCCCcEE---Ec
Confidence 776 4455666766 55 44433 567888888999987776 333 68777776543 23222 88
Q ss_pred CCCCCCcccHHHHHHHHHHHHHH
Q 025927 198 PGFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 198 PGfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
||.+| ...+++.++++|+..
T Consensus 232 P~~~~---~~~sl~~~~~IR~~a 251 (445)
T 2h9a_A 232 PQPEN---ISEGLFYQTQIRRLA 251 (445)
T ss_dssp CCCSS---HHHHHHHHHHHHHHH
T ss_pred CCchh---HHHHHHHHHHHHHhh
Confidence 99644 345777777777763
No 267
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=70.86 E-value=26 Score=33.02 Aligned_cols=120 Identities=16% Similarity=0.133 Sum_probs=74.2
Q ss_pred CCCeeEEEeccC-----cccchHHHHhc--CCCEEEEccCCcc---------cccHHHHHHHHHHc--------------
Q 025927 115 DLPLDVHLMIVE-----PEQRVPDFIKA--GADIVSVHCEQSS---------TIHLHRTLNQIKDL-------------- 164 (246)
Q Consensus 115 ~~plDvHLMV~~-----P~~~i~~~~~a--gad~It~H~E~~~---------~~~~~~~i~~Ik~~-------------- 164 (246)
..++-+.++-.+ ++.|.+....+ ++|+|.+++=+=. .+.+.++++.+|+.
T Consensus 179 ~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~ 258 (443)
T 1tv5_A 179 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDES 258 (443)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC---------
T ss_pred CceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCcccccc
Confidence 357888888776 66777655444 5999999873200 11245677777652
Q ss_pred -------------------------------------CCc-EEEEEcCCCChHHHHHhhh-----hcceEEEEeec----
Q 025927 165 -------------------------------------GAK-AGVVLNPATSLSAIECVLD-----VVDLVLIMSVN---- 197 (246)
Q Consensus 165 -------------------------------------G~k-~GlAlnP~Tpve~l~~~l~-----~vD~VLvMsV~---- 197 (246)
.+. +.+=|.|+...+++.++.. -+|.|.+-..-
T Consensus 259 ~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~ 338 (443)
T 1tv5_A 259 TYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQIN 338 (443)
T ss_dssp -----------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCC
T ss_pred CHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccc
Confidence 345 6888899876555444432 28988774321
Q ss_pred ---------CCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 198 ---------PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 198 ---------PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
-|++|.+..|..++-|+++++... -++.|-..|||+.
T Consensus 339 d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~---~~iPVIg~GGI~s 384 (443)
T 1tv5_A 339 DIKSFENKKGGVSGAKLKDISTKFICEMYNYTN---KQIPIIASGGIFS 384 (443)
T ss_dssp CCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTT---TCSCEEEESSCCS
T ss_pred cccccccccCCcCCCcchHHHHHHHHHHHHHcC---CCCcEEEECCCCC
Confidence 133444445666777777766542 2467888999963
No 268
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=70.78 E-value=39 Score=29.68 Aligned_cols=127 Identities=14% Similarity=0.090 Sum_probs=77.8
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--C-CCEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--G-ADIV 142 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--g-ad~I 142 (246)
..|+..+++.++.+.+.|++.+=+ =|+--...++..+.-+++ ++..++. | ---|
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v---~GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~g~rvpv 80 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVP---VGTTGESATLTHEEHRTC--------------------IEIAVETCKGTKVKV 80 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEC---SSTTTTGGGSCHHHHHHH--------------------HHHHHHHHTTSSCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHH--------------------HHHHHHHhCCCCCeE
Confidence 689999999999999999987733 333333345555443333 2222222 2 1245
Q ss_pred EEccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHHH----hhhhcceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 143 SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIEC----VLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 143 t~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~~----~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
..+.=+.++.+..+..++.++.|..+-+++.|.. +-+.+.. +.+.+|.=+++==.|+..|..+.++++.++.+
T Consensus 81 iaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 81 LAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFR 160 (301)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHh
Confidence 5565433345556667777788888888887752 2233333 33445554444456888888999988877653
No 269
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=70.57 E-value=35 Score=28.61 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
++++...++|+|.+|. |+ +.++.++..+++ +.++-. =+.+|.+.. .-.++|+|++-||+-. ..-
T Consensus 79 d~~~~A~~aGAd~v~~--------p~--~d~~v~~~~~~~-g~~~i~--G~~t~~e~~-~A~~~Gad~v~~Fpa~--~~g 142 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAIS--------PG--LTEPLLKAATEG-TIPLIP--GISTVSELM-LGMDYGLKEFKFFPAE--ANG 142 (214)
T ss_dssp HHHHHHHHHTCSCEEE--------SS--CCHHHHHHHHHS-SSCEEE--EESSHHHHH-HHHHTTCCEEEETTTT--TTT
T ss_pred HHHHHHHHcCCCEEEc--------CC--CCHHHHHHHHHh-CCCEEE--ecCCHHHHH-HHHHCCCCEEEEecCc--ccc
Confidence 7888888999999993 42 345666766553 444332 366787754 4467899999998732 111
Q ss_pred HHHHHHHHHHcC--CcEEEEEcCCCChHHHHHhhhh--cceEE
Q 025927 154 LHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLDV--VDLVL 192 (246)
Q Consensus 154 ~~~~i~~Ik~~G--~k~GlAlnP~Tpve~l~~~l~~--vD~VL 192 (246)
-...++.+++.- +.+ +++- +-..+.+.+|+.. ++.|-
T Consensus 143 G~~~lk~i~~~~~~ipv-vaiG-GI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 143 GVKALQAIAGPFSQVRF-CPTG-GISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp HHHHHHHHHTTCTTCEE-EEBS-SCCTTTHHHHHTSTTBSCEE
T ss_pred CHHHHHHHhhhCCCCeE-EEEC-CCCHHHHHHHHhcCCCeEEE
Confidence 135677777543 322 3333 4455788888875 55443
No 270
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=70.46 E-value=32 Score=37.43 Aligned_cols=100 Identities=20% Similarity=0.259 Sum_probs=61.4
Q ss_pred cCCCEEEEcc--CCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhh--hcceEEEEeecCCCCCCcccH---
Q 025927 137 AGADIVSVHC--EQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIE--- 207 (246)
Q Consensus 137 agad~It~H~--E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~--~vD~VLvMsV~PGfgGQ~F~~--- 207 (246)
.|.+.++... +-.+.+++..++..+|+. ++.+++-+-+.+.+.....-+. -+|.|.|=.-+.|- |-.+.+
T Consensus 961 ~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGT-gasp~~~~~ 1039 (1479)
T 1ea0_A 961 PGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGT-GASPQTSIK 1039 (1479)
T ss_dssp TTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCC-SSEETTHHH
T ss_pred CCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCC-CCCchhhhc
Confidence 4667776422 211123456788888887 6788888888655544433332 48999886555443 223322
Q ss_pred ----HHHHHHHHHHHHHHhcCC--CCeEEEeCCCCh
Q 025927 208 ----SQVKKISDLRRMCLEKGV--NPWIEVDGGVGP 237 (246)
Q Consensus 208 ----~~l~KI~~lr~l~~~~~~--~~~I~VDGGI~~ 237 (246)
.+..-+.++++.+.++|+ ++.|.+||||..
T Consensus 1040 ~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrt 1075 (1479)
T 1ea0_A 1040 FAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKT 1075 (1479)
T ss_dssp HSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCS
T ss_pred CCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCC
Confidence 234556677777766654 478999999974
No 271
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=70.11 E-value=18 Score=34.31 Aligned_cols=140 Identities=19% Similarity=0.213 Sum_probs=76.8
Q ss_pred HHHHHHcCCCEEEeeeccCcccCCCC----CCHHHHhhccc-CCCCCeeEEEeccC-------c----ccchHHHHhcCC
Q 025927 76 VKAVELAGCDWIHVDVMDGRFVPNIT----IGPLVVDALRP-VTDLPLDVHLMIVE-------P----EQRVPDFIKAGA 139 (246)
Q Consensus 76 i~~l~~~g~d~lHiDIMDG~FVpN~t----fgp~~I~~ir~-~t~~plDvHLMV~~-------P----~~~i~~~~~aga 139 (246)
++.|.+.|+++|=+=- =++|+..+. =..+.++.+++ ..+..+-+.+-..| | ..+++...++|+
T Consensus 36 a~~L~~~Gv~~IE~g~-~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gv 114 (464)
T 2nx9_A 36 AQQLDQIGYWSLECWG-GATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGM 114 (464)
T ss_dssp HHHHHTSCCSEEEEEE-TTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEeCc-CccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCCc
Confidence 4566778988776521 011432211 12345666665 34455544432111 2 345677788999
Q ss_pred CEEEEccCCcccccHHHHHHHHHHcCCcEEEEE----cCCCChHHHHHhhhh-----cceEEEEeecCCCCCCcccHHHH
Q 025927 140 DIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL----NPATSLSAIECVLDV-----VDLVLIMSVNPGFGGQSFIESQV 210 (246)
Q Consensus 140 d~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAl----nP~Tpve~l~~~l~~-----vD~VLvMsV~PGfgGQ~F~~~~l 210 (246)
+.|.+-.=.....++...++++|+.|.++-..+ .+.++.+.+.+++.. +|.|-+-=. -|. ..=..+.
T Consensus 115 d~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT-~G~---~~P~~v~ 190 (464)
T 2nx9_A 115 DVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDM-AGI---LTPYAAE 190 (464)
T ss_dssp CEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEET-TSC---CCHHHHH
T ss_pred CEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCC-CCC---cCHHHHH
Confidence 988876432224567889999999999986666 334455666555443 565544311 122 2223444
Q ss_pred HHHHHHHHHH
Q 025927 211 KKISDLRRMC 220 (246)
Q Consensus 211 ~KI~~lr~l~ 220 (246)
+-|+.+++..
T Consensus 191 ~lv~~l~~~~ 200 (464)
T 2nx9_A 191 ELVSTLKKQV 200 (464)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 4555555543
No 272
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=70.07 E-value=32 Score=30.54 Aligned_cols=74 Identities=16% Similarity=0.140 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHH------------HhhcccCC---CCCeeEEEeccCcccchHHHHhcC
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLV------------VDALRPVT---DLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~------------I~~ir~~t---~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
+.++...++|+|.+.+. | .... .++|+. ++.+++.. +.| -+|. ..+...+++.+.+.|
T Consensus 191 ~~~~~~~~aGad~i~i~--d-~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~-~~g~~~~l~~l~~~g 263 (354)
T 3cyv_A 191 LYLNAQIKAGAQAVMIF--D-TWGG--VLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLF-TKGGGQWLEAMAETG 263 (354)
T ss_dssp HHHHHHHHTTCSEEEEE--C-TTGG--GSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEE-CTTTTTTHHHHHTTS
T ss_pred HHHHHHHHhCCCEEEEe--C-Cccc--cCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEE-CCCHHHHHHHHHhcC
Confidence 34555667899998752 3 2222 355543 44455432 466 4565 556688999999999
Q ss_pred CCEEEEccCCcccccHHHHH
Q 025927 139 ADIVSVHCEQSSTIHLHRTL 158 (246)
Q Consensus 139 ad~It~H~E~~~~~~~~~~i 158 (246)
+|.+.+ +. ..++.+..
T Consensus 264 ~d~i~~--d~--~~dl~~~~ 279 (354)
T 3cyv_A 264 CDALGL--DW--TTDIADAR 279 (354)
T ss_dssp CSEEEC--CT--TSCHHHHH
T ss_pred CCEEEe--CC--CCCHHHHH
Confidence 999986 42 24555443
No 273
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=70.05 E-value=23 Score=31.02 Aligned_cols=124 Identities=11% Similarity=0.060 Sum_probs=76.4
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..|+..+++.++.+.+.|++.+=+==.=| ...++..+.-.++ ++..+++-.. |..+
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTG---E~~~Ls~eEr~~v--------------------~~~~~~~~~g-ViaG 71 (288)
T 2nuw_A 16 KVNVDALKTHAKNLLEKGIDAIFVNGTTG---LGPALSKDEKRQN--------------------LNALYDVTHK-LIFQ 71 (288)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEETSTTT---TGGGSCHHHHHHH--------------------HHHHTTTCSC-EEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc---ChhhCCHHHHHHH--------------------HHHHHHHhCC-eEEe
Confidence 58999999999999999988764332222 2345555443333 2233332222 6677
Q ss_pred cCCcccccHHHHHHHHHHcCCcEEEEEcCCC----ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHH
Q 025927 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT----SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T----pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|.=+++==.|+..|..+.++++.++
T Consensus 72 vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 72 VGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp CCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred eCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 6543345556667777788988888888863 223333 3344455533444458888888988888764
No 274
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=69.91 E-value=20 Score=31.89 Aligned_cols=144 Identities=15% Similarity=0.226 Sum_probs=88.4
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeecc--CcccCCCCCCHHHHhhcccC-CCCCeeEEEecc---CcccchHHHHhcCC
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMD--GRFVPNITIGPLVVDALRPV-TDLPLDVHLMIV---EPEQRVPDFIKAGA 139 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMD--G~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~---~P~~~i~~~~~aga 139 (246)
..-+..+.++..++.++|+..+|+-+-| |.-..+...--++++.||+. +++.+-+---.. .++.-+..+ +...
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~P 108 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALKP 108 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGCC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcCC
Confidence 3446788899999999999999998876 33222222234667778875 455433322111 344333333 5577
Q ss_pred CEEEEccCCc---------ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-------cceEEEEeecCCCCCC
Q 025927 140 DIVSVHCEQS---------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-------VDLVLIMSVNPGFGGQ 203 (246)
Q Consensus 140 d~It~H~E~~---------~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-------vD~VLvMsV~PGfgGQ 203 (246)
|+.|+-.=+. +...+.++++.++++|+++-+-+---.-+..+..|++. .-+-+||.+ || |+
T Consensus 109 e~asl~~gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~Gl~p~~p~~~~~VlGv-~~--g~ 185 (282)
T 2y7e_A 109 EMATLNAGTLNFGDDIFINHPADIIRLAEAFKQYNVVPEVEVYESGMVDAVARLIKKGIITQNPLHIQFVLGV-PG--GM 185 (282)
T ss_dssp SEEEEECCCEEETTEEECCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHTTSCCCSSCEEEEEECC-TT--SC
T ss_pred CEEEecccccccccccccCCHHHHHHHHHHHHHcCCeEEEEEECHHHHHHHHHHHHcCCCCCCCeEEEEEEec-CC--CC
Confidence 8775543211 12457899999999999998888754455555555443 234566775 33 66
Q ss_pred cccHHHHHHH
Q 025927 204 SFIESQVKKI 213 (246)
Q Consensus 204 ~F~~~~l~KI 213 (246)
+-.++.+.-.
T Consensus 186 ~~~~~~L~~~ 195 (282)
T 2y7e_A 186 SGKPKNLMYM 195 (282)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6667666544
No 275
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=69.83 E-value=15 Score=30.95 Aligned_cols=128 Identities=11% Similarity=0.135 Sum_probs=72.8
Q ss_pred CcEEeeeecccCh-hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCCCeeE-EEec-------
Q 025927 57 DIIVSPSILSANF-AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDLPLDV-HLMI------- 124 (246)
Q Consensus 57 ~~~IsPSIl~aD~-~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~plDv-HLMV------- 124 (246)
++-++.+.+.-++ ..+.+.++.+.+.|.+.+-+..-. + +. +.+..++++++ ..++.+.. |-..
T Consensus 3 kigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~--~-~~--~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~ 77 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASP--L-PF--YSDIQINELKACAHGNGITLTVGHGPSAEQNLSS 77 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTT--G-GG--CCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTC
T ss_pred eEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcc--c-CC--cCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCC
Confidence 3445555454433 368999999999999988876532 2 33 35656666654 25666665 3221
Q ss_pred cCcc----------cchHHHHhcCCCEEE--Ecc------C-Ccc--------cccHHHHHHHHHHcCCcEEEEEcC---
Q 025927 125 VEPE----------QRVPDFIKAGADIVS--VHC------E-QSS--------TIHLHRTLNQIKDLGAKAGVVLNP--- 174 (246)
Q Consensus 125 ~~P~----------~~i~~~~~agad~It--~H~------E-~~~--------~~~~~~~i~~Ik~~G~k~GlAlnP--- 174 (246)
.+|+ +.++...+.|+++|. +|. . ... .+.+.++....++.|++.++=-.+
T Consensus 78 ~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~ 157 (294)
T 3vni_A 78 PDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFE 157 (294)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCccc
Confidence 1332 135555667999997 442 1 000 112445556667788876554332
Q ss_pred C---CChHHHHHhhhhcc
Q 025927 175 A---TSLSAIECVLDVVD 189 (246)
Q Consensus 175 ~---Tpve~l~~~l~~vD 189 (246)
. ...+.+..+++.+|
T Consensus 158 ~~~~~~~~~~~~l~~~v~ 175 (294)
T 3vni_A 158 NYLINTAQEGVDFVKQVD 175 (294)
T ss_dssp CSSCCSHHHHHHHHHHHC
T ss_pred CcccCCHHHHHHHHHHcC
Confidence 1 24566666776665
No 276
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=69.76 E-value=8.7 Score=34.91 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=69.4
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc---CcccchHHHHhcCCCEEEEcc
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV---EPEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~---~P~~~i~~~~~agad~It~H~ 146 (246)
...-+..+.++++|+|.| |++.+. .++.++++.+..++|+-+- |+. .|..-.++|.+.|..+|++..
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i--------~~e~~~-~~e~~~~i~~~l~~P~lan-~~~~g~~~~~~~~eL~~lGv~~v~~~~ 258 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADAT--------FVEAPA-NVDELKEVSAKTKGLRIAN-MIEGGKTPLHTPEEFKEMGFHLIAHSL 258 (318)
T ss_dssp HHHHHHHHHHHHTTCSEE--------EECCCC-SHHHHHHHHHHSCSEEEEE-ECTTSSSCCCCHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHcCCCEE--------EEcCCC-CHHHHHHHHHhcCCCEEEE-eccCCCCCCCCHHHHHHcCCeEEEEch
Confidence 345566678889999865 555442 4577888876556887663 443 366668999999999999986
Q ss_pred CCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 147 EQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 147 E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
-.. +..-..+.++.|++.|...++ ...-.+.+++..++.
T Consensus 259 ~~~raa~~a~~~~~~~l~~~g~~~~~-~~~~~~~~el~~l~~ 299 (318)
T 1zlp_A 259 TAVYATARALVNIMKILKEKGTTRDD-LDQMATFSEFNELIS 299 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSTTC-GGGSCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccc-cccCCCHHHHHHhcC
Confidence 532 122355778888888865332 122356666666653
No 277
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=69.71 E-value=7.6 Score=35.06 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=70.7
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc---CcccchHHHHhcCCCEEEEc
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV---EPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~---~P~~~i~~~~~agad~It~H 145 (246)
+...-+..+.++++|+|.+ |++... .++.++.+.+..+.|+-+- |+. .|..-.++|.+.|+.+|++.
T Consensus 174 ~~~ai~Ra~ay~eAGAD~i--------~~e~~~-~~~~~~~i~~~~~~P~~~n-~~~~g~tp~~~~~eL~~lGv~~v~~~ 243 (305)
T 3ih1_A 174 LDEAIERANAYVKAGADAI--------FPEALQ-SEEEFRLFNSKVNAPLLAN-MTEFGKTPYYSAEEFANMGFQMVIYP 243 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEE--------EETTCC-SHHHHHHHHHHSCSCBEEE-CCTTSSSCCCCHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEE--------EEcCCC-CHHHHHHHHHHcCCCEEEe-ecCCCCCCCCCHHHHHHcCCCEEEEc
Confidence 3344455666778999876 555442 4678888877667888443 443 36666899999999999998
Q ss_pred cCCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 146 CEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 146 ~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
.-.. +..-..+.++.|++.|...++ ...-.+.+++..++.
T Consensus 244 ~~~~raa~~a~~~~~~~i~~~g~~~~~-~~~~~~~~el~~l~~ 285 (305)
T 3ih1_A 244 VTSLRVAAKAYENVFTLIKETGSQKDA-LSNMQTRSELYETIS 285 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSSCGGG-GGGSCCHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCcccc-hhcCCCHHHHHHHcC
Confidence 6432 123466788889988865442 233357777777653
No 278
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=69.66 E-value=26 Score=35.59 Aligned_cols=139 Identities=16% Similarity=0.329 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCC--------HHHHhhccc---C-CCCCeeEEEeccCcccchHHHHhcC
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG--------PLVVDALRP---V-TDLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg--------p~~I~~ir~---~-t~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
.+.+++++|.++|++||.+|=-. ++..+... ...++.++. . .+..+.+|+.-.+-...++.+.+.+
T Consensus 590 ayreeI~~L~~AGa~~IQIDEPa--L~~~L~~~~~d~~~~l~~a~~aln~a~gv~~~~~I~lH~C~G~~~di~~~L~~l~ 667 (766)
T 1t7l_A 590 AINEEVKDLEEAGIKIVQIDEPA--FREKAPIKKSKWPEYFEWAINAFNLAANARPETQIHAHMCYSDFNEIIEYIHQLE 667 (766)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTH--HHHTSCSSGGGHHHHHHHHHHHHHHHTCCCTTSEEEEECCCSCCTTTHHHHTTSC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCc--ccccCCCcchhHHHHHHHHHHHHHHhhcCCCCceEEEEEecCchHHHHHHHHcCC
Confidence 56688999999999999999542 22222211 112223321 1 1345566666555556788889999
Q ss_pred CCEEEEccCCcccccHHHHHHHHHHc---CCcEEEEEcCC-----CChHHHHHhhh----hc--ceEEEEeecC--CCCC
Q 025927 139 ADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPA-----TSLSAIECVLD----VV--DLVLIMSVNP--GFGG 202 (246)
Q Consensus 139 ad~It~H~E~~~~~~~~~~i~~Ik~~---G~k~GlAlnP~-----Tpve~l~~~l~----~v--D~VLvMsV~P--GfgG 202 (246)
+|.|++-... +. ...+..+++. +..+|+-+-.. .+.+.+...+. .+ |. +.|.| |++.
T Consensus 668 VD~IsLE~~R-s~---~elL~~l~~~p~~~k~L~lGVVD~rn~~ved~EeI~~rI~~a~~~Vg~er---L~VsPdCGL~~ 740 (766)
T 1t7l_A 668 FDVISIEASR-SK---GEIISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKEL---IWINPDCGLKT 740 (766)
T ss_dssp CSEEEEECTT-TT---TGGGHHHHTSTTCCSEEEEECSCTTSCSCCCHHHHHHHHHHHTTTSCGGG---EEEECSSCCTT
T ss_pred CCEEEEecCC-Cc---hhHHHHHHhccccCCeEEEEEECCCCCCCCCHHHHHHHHHHHHHhcCccc---EEEeCCCCCCC
Confidence 9998876432 12 2344545532 34566655433 22344443332 22 33 34556 5655
Q ss_pred CcccHHHHHHHHHHHHH
Q 025927 203 QSFIESQVKKISDLRRM 219 (246)
Q Consensus 203 Q~F~~~~l~KI~~lr~l 219 (246)
-+.. ++.+|++.+.+.
T Consensus 741 ~p~~-e~~~kLk~mvaa 756 (766)
T 1t7l_A 741 RNWD-EVIPSLRNMVAL 756 (766)
T ss_dssp SCHH-HHHHHHHHHHHH
T ss_pred CCHH-HHHHHHHHHHHH
Confidence 4443 456666665443
No 279
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=69.60 E-value=6.7 Score=35.04 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=34.6
Q ss_pred HHHHHHHHHHcC---CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhc--C-CC
Q 025927 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEK--G-VN 226 (246)
Q Consensus 154 ~~~~i~~Ik~~G---~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~--~-~~ 226 (246)
....++..|+.. .++++ ..+|. +.+.+.++ .+|+|.+=+ |.++. ++++++.+++. | .+
T Consensus 185 i~~ai~~~r~~~~~~~~i~v--ev~tl-ee~~~A~~aGaD~I~ld~---------~~~~~---l~~~v~~l~~~~~g~~~ 249 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEV--ECLSE-DEATEAIEAGADVIMLDN---------FKGDG---LKMCAQSLKNKWNGKKH 249 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEE--ECSSS-HHHHHHHHHTCSEEECCC---------------------------------C
T ss_pred HHHHHHHHHHhcCcCCeEEE--ecCCH-HHHHHHHHcCCCEEEECC---------CCHHH---HHHHHHHhcccccCCCC
Confidence 445566666543 46665 44555 55555443 589988633 23333 34444555443 1 23
Q ss_pred CeEEEeCCCChhhhhhccc
Q 025927 227 PWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 227 ~~I~VDGGI~~e~i~~l~~ 245 (246)
..|++=||||++|++.+.+
T Consensus 250 v~I~ASGGIt~~ni~~~~~ 268 (294)
T 3c2e_A 250 FLLECSGGLNLDNLEEYLC 268 (294)
T ss_dssp CEEEEECCCCC------CC
T ss_pred eEEEEECCCCHHHHHHHHH
Confidence 6899999999999998865
No 280
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=69.53 E-value=31 Score=29.31 Aligned_cols=101 Identities=14% Similarity=0.153 Sum_probs=63.9
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
++++...++|+|.+|.-- +.++.++..|+ .+.++-.= +.+|.+.. .-.++|+|+|-||+.. ..-
T Consensus 80 d~~~~A~~aGAd~v~~p~----------~d~~v~~~ar~-~g~~~i~G--v~t~~e~~-~A~~~Gad~vk~Fpa~--~~g 143 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG----------LNPKIVKLCQD-LNFPITPG--VNNPMAIE-IALEMGISAVKFFPAE--ASG 143 (224)
T ss_dssp HHHHHHHHHTCSEEECSS----------CCHHHHHHHHH-TTCCEECE--ECSHHHHH-HHHHTTCCEEEETTTT--TTT
T ss_pred HHHHHHHHCCCCEEEECC----------CCHHHHHHHHH-hCCCEEec--cCCHHHHH-HHHHCCCCEEEEeeCc--ccc
Confidence 788888899999998542 33667777777 35443332 66787754 4567899999998731 111
Q ss_pred HHHHHHHHHHcC--CcEEEEEcCCCChHHHHHhhhh--cceEE
Q 025927 154 LHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLDV--VDLVL 192 (246)
Q Consensus 154 ~~~~i~~Ik~~G--~k~GlAlnP~Tpve~l~~~l~~--vD~VL 192 (246)
-...++.+++.- +++ +++- +-..+.+.+|+.. ++.|-
T Consensus 144 G~~~lk~l~~~~~~ipv-vaiG-GI~~~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 144 GVKMIKALLGPYAQLQI-MPTG-GIGLHNIRDYLAIPNIVACG 184 (224)
T ss_dssp HHHHHHHHHTTTTTCEE-EEBS-SCCTTTHHHHHTSTTBCCEE
T ss_pred CHHHHHHHHhhCCCCeE-EEEC-CcCHHHHHHHHhcCCCEEEE
Confidence 135677777543 332 3333 4556788888875 55544
No 281
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=69.46 E-value=39 Score=29.58 Aligned_cols=123 Identities=13% Similarity=0.055 Sum_probs=74.8
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..|+..+++.++.+.+.|++.+=+==.=| ...++..+.-.++ ++..+++-.. |..+
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~~~GttG---E~~~Ls~eEr~~v--------------------~~~~~~~~~g-viaG 71 (293)
T 1w3i_A 16 RIDKEKLKIHAENLIRKGIDKLFVNGTTG---LGPSLSPEEKLEN--------------------LKAVYDVTNK-IIFQ 71 (293)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTT---TGGGSCHHHHHHH--------------------HHHHHTTCSC-EEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc---ChhhCCHHHHHHH--------------------HHHHHHHcCC-EEEe
Confidence 58999999999999999988764332222 2345554433332 3333333223 6677
Q ss_pred cCCcccccHHHHHHHHHHcCCcEEEEEcCCC----ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHH
Q 025927 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT----SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKK 212 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T----pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~K 212 (246)
.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.|
T Consensus 72 vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 72 VGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp CCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 6543344555666666778888888888852 223333 333445553444445888888888888765
No 282
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=69.25 E-value=24 Score=29.56 Aligned_cols=102 Identities=11% Similarity=0.140 Sum_probs=61.1
Q ss_pred cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcE-EEEEcCC----CC--------hHHHHHhhhh-----c
Q 025927 127 PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKA-GVVLNPA----TS--------LSAIECVLDV-----V 188 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~-GlAlnP~----Tp--------ve~l~~~l~~-----v 188 (246)
.+..++.+.++|.+.|-+..... ..++.++.+.+++.|+++ ++..... .+ ++.++..++. +
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa 118 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGGGL-AGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGS 118 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBSTTC-GGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEecCCch-HHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45667788889999998887732 346778888888999987 3433211 11 2344444442 4
Q ss_pred ceEEEEeecCCCCCCc----c----cHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 025927 189 DLVLIMSVNPGFGGQS----F----IESQVKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 189 D~VLvMsV~PGfgGQ~----F----~~~~l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
+.|.+ .||+++.. . .....+.++++-++..+.|..+-+|--
T Consensus 119 ~~v~~---~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 167 (287)
T 3kws_A 119 TGVII---VPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPL 167 (287)
T ss_dssp SEEEE---CSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CEEEE---ecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 44444 46654321 2 234455666666677777776666644
No 283
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=69.22 E-value=96 Score=31.06 Aligned_cols=151 Identities=14% Similarity=0.107 Sum_probs=89.5
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccC-cc---cCCCCCCH-HHHhhccc-CCCCCeeEEEecc-------Cc----cc
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDG-RF---VPNITIGP-LVVDALRP-VTDLPLDVHLMIV-------EP----EQ 129 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG-~F---VpN~tfgp-~~I~~ir~-~t~~plDvHLMV~-------~P----~~ 129 (246)
.......+-++.|.+.|+++-++.+-=| +| .|..+-+| +.++.+++ ..+.++-+++-.. .| ..
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~ 201 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFK 201 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHH
Confidence 4445555667888888888877777411 21 12233345 45666655 3455666555321 23 35
Q ss_pred chHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCC----------CChHHHHHhhhh-----cceEEEE
Q 025927 130 RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA----------TSLSAIECVLDV-----VDLVLIM 194 (246)
Q Consensus 130 ~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~----------Tpve~l~~~l~~-----vD~VLvM 194 (246)
+++...++|++.|.+..-......+...++++|+.|..+-.+++-. ++.+.+.+++.. +|.|-+-
T Consensus 202 ~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~ 281 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIK 281 (718)
T ss_dssp HHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 6777888999987776432123457788889999998887766432 255666555543 5654442
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHHH
Q 025927 195 SVNPGFGGQSFIESQVKKISDLRRMCL 221 (246)
Q Consensus 195 sV~PGfgGQ~F~~~~l~KI~~lr~l~~ 221 (246)
.=.|-..-..+.+.|+.+|+.++
T Consensus 282 ----DT~G~~~P~~v~~lV~~lk~~~p 304 (718)
T 3bg3_A 282 ----DMAGLLKPTACTMLVSSLRDRFP 304 (718)
T ss_dssp ----CTTSCCCHHHHHHHHHHHHHHST
T ss_pred ----CcCCCcCHHHHHHHHHHHHHhCC
Confidence 22343434455666777777653
No 284
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=69.22 E-value=22 Score=30.04 Aligned_cols=87 Identities=16% Similarity=0.162 Sum_probs=56.2
Q ss_pred CCCCHHHHhhcccC-CCCCeeEEEec-c----CcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEc
Q 025927 100 ITIGPLVVDALRPV-TDLPLDVHLMI-V----EPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (246)
Q Consensus 100 ~tfgp~~I~~ir~~-t~~plDvHLMV-~----~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAln 173 (246)
.+|.++.++.+|+. .++++ -+.+ . +|..+++.....|++.+.+++... . .++++.+|++|+++-+.--
T Consensus 147 ~Sf~~~~l~~~~~~~p~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~~v~~~~~~G~~v~~wTv 220 (258)
T 2o55_A 147 CSFHHEALAHLKALCPDVKI--TYLFNYMGQPTPLDFVEQACYGDANGVSMLFHYL---T-KEQVCTAHEKGLSVTVWMP 220 (258)
T ss_dssp EESSHHHHHHHHHHCTTCEE--EEECCTTSCCCCTTHHHHHHHTTCSEEEEEGGGC---C-HHHHHHHHHTTCEEEEECC
T ss_pred EeCCHHHHHHHHHHCCCCcE--EEEEeCCCCCCHHHHHHHHHhcCCeEEecChhhc---C-HHHHHHHHHCCCEEEEeeC
Confidence 48899999999874 33432 2333 2 344454446778999999888742 2 3678999999998876532
Q ss_pred --CCCChHHHHHhhhh-cceEE
Q 025927 174 --PATSLSAIECVLDV-VDLVL 192 (246)
Q Consensus 174 --P~Tpve~l~~~l~~-vD~VL 192 (246)
.+-..+.+..+++. +|.|.
T Consensus 221 ~~~~n~~~~~~~l~~~GvdgI~ 242 (258)
T 2o55_A 221 WIFDDSEEDWKKCLELQVDLIC 242 (258)
T ss_dssp TTCCCCHHHHHHHHHHTCSEEE
T ss_pred CCCCCCHHHHHHHHHcCCCEEE
Confidence 11345667777663 77743
No 285
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=69.19 E-value=8.1 Score=35.56 Aligned_cols=93 Identities=18% Similarity=0.120 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC-CCEEEEccCC
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG-ADIVSVHCEQ 148 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag-ad~It~H~E~ 148 (246)
....+-++.|+++|+|+||+-.. .+.+ -.+..+ ++.+|+.+++|+-+==-+ +|+... .+++.| +|.|.+=-..
T Consensus 266 ~~~~~la~~l~~~Gvd~i~v~~~--~~~~-~~~~~~-~~~ir~~~~iPvi~~G~i-t~~~a~-~~l~~g~aD~V~igR~~ 339 (379)
T 3aty_A 266 ALTKHLCKKIEPLSLAYLHYLRG--DMVN-QQIGDV-VAWVRGSYSGVKISNLRY-DFEEAD-QQIREGKVDAVAFGAKF 339 (379)
T ss_dssp HHHHHHHHHHGGGCCSEEEEECS--CTTS-CCCCCH-HHHHHTTCCSCEEEESSC-CHHHHH-HHHHTTSCSEEEESHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEcCC--CcCC-CCccHH-HHHHHHHCCCcEEEECCC-CHHHHH-HHHHcCCCeEEEecHHH
Confidence 34556678899999999999752 2211 112236 888998888886543233 566654 445555 9999985332
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEcCCC
Q 025927 149 SSTIHLHRTLNQIKDLGAKAGVVLNPAT 176 (246)
Q Consensus 149 ~~~~~~~~~i~~Ik~~G~k~GlAlnP~T 176 (246)
....+ +.+++++ |..+++-+
T Consensus 340 l~~P~---l~~k~~~-----g~~l~~~~ 359 (379)
T 3aty_A 340 IANPD---LVERAQQ-----NWPLNEPR 359 (379)
T ss_dssp HHCTT---HHHHHHH-----TCCCCCCC
T ss_pred HhCcH---HHHHHHc-----CCCCCCCC
Confidence 22223 4555553 44555443
No 286
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=68.89 E-value=11 Score=32.29 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=26.4
Q ss_pred CcEEeeeecccCh-hhHHHHHHHHHHcCCCEEEeee
Q 025927 57 DIIVSPSILSANF-AKLGEQVKAVELAGCDWIHVDV 91 (246)
Q Consensus 57 ~~~IsPSIl~aD~-~~l~~~i~~l~~~g~d~lHiDI 91 (246)
..+|+-|.++.-. ..+.+.++.+.+.|.+.+-+-.
T Consensus 22 ~~klgi~~~~~~~~~~~~~~l~~a~~~G~~~vEl~~ 57 (296)
T 2g0w_A 22 KCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRA 57 (296)
T ss_dssp CCCEEECGGGGTTTSCHHHHHHHHHHTTCSEEEEEH
T ss_pred CCCceeechhcCCCCCHHHHHHHHHHcCCCEEEeCH
Confidence 4456666666544 6788999999999999888765
No 287
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=68.80 E-value=9.6 Score=31.84 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=48.0
Q ss_pred ccchHHHHhcCCCEEEEccCC--------cccccHHHHHHHHHHcCC-cEEEE----EcCCC-------ChHHHHHhhhh
Q 025927 128 EQRVPDFIKAGADIVSVHCEQ--------SSTIHLHRTLNQIKDLGA-KAGVV----LNPAT-------SLSAIECVLDV 187 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E~--------~~~~~~~~~i~~Ik~~G~-k~GlA----lnP~T-------pve~l~~~l~~ 187 (246)
+..++...++|.+.|-+..+. .....+.++.+.+++.|+ .+.+- +|+.. .++.++..++.
T Consensus 17 ~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~i~~ 96 (270)
T 3aam_A 17 AGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADDLEK 96 (270)
T ss_dssp HHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 445666666777766654321 001245566666777777 44331 12221 12333333332
Q ss_pred cce--EEEEeecCCCCCCcccHHHHHHHHHHHHHHH-hcCCCCeEEEe
Q 025927 188 VDL--VLIMSVNPGFGGQSFIESQVKKISDLRRMCL-EKGVNPWIEVD 232 (246)
Q Consensus 188 vD~--VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~-~~~~~~~I~VD 232 (246)
+.. .-.+.+.||+.|. ....+.++++-+..+ +.|..+.||-.
T Consensus 97 a~~lGa~~vv~h~g~~~~---~~~~~~l~~l~~~a~~~~gv~l~lEn~ 141 (270)
T 3aam_A 97 AALLGVEYVVVHPGSGRP---ERVKEGALKALRLAGVRSRPVLLVENT 141 (270)
T ss_dssp HHHHTCCEEEECCCBSCH---HHHHHHHHHHHHHHTCCSSSEEEEECC
T ss_pred HHHcCCCEEEECCCCCCH---HHHHHHHHHHHHhhcccCCCEEEEecC
Confidence 111 1223455776532 455555555555544 45554455544
No 288
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=68.79 E-value=20 Score=30.44 Aligned_cols=71 Identities=8% Similarity=0.085 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
+-++.+...|++.+|.+.- ...++.++.+++. ++ .||..+-|-...++.+.+.|+|.|+- ++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~-G~--~V~~WTvn~~~~~~~l~~~GVDgIiT-------D~ 233 (250)
T 3ks6_A 172 AVIETAIAHSIHEIGVHID--------TADAGLMAQVQAA-GL--DFGCWAAHTPSQITKALDLGVKVFTT-------DR 233 (250)
T ss_dssp HHHHHHHHTTCCEEEEEGG--------GCCHHHHHHHHHT-TC--EEEEECCCSHHHHHHHHHHTCSEEEE-------SC
T ss_pred HHHHHHHhcCCCEEecchh--------hCCHHHHHHHHHC-CC--EEEEEeCCCHHHHHHHHHcCCCEEEc-------CC
Confidence 3445567789999998752 2468899998764 54 45666666555677889999999883 45
Q ss_pred HHHHHHHHH
Q 025927 154 LHRTLNQIK 162 (246)
Q Consensus 154 ~~~~i~~Ik 162 (246)
|..+.+.++
T Consensus 234 P~~~~~~~~ 242 (250)
T 3ks6_A 234 PTLAIALRT 242 (250)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555444443
No 289
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=68.34 E-value=5 Score=36.97 Aligned_cols=68 Identities=25% Similarity=0.203 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..+.++.+.++|+|.+|+|...|+.- .-.+.|+++|+.. +.++-+. -|..++. ...+.++|+|.|.+-
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~----~~~~~I~~ik~~~p~v~Vi~G-~v~t~e~-A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSE----GVLQRIRETRAAYPHLEIIGG-NVATAEG-ARALIEAGVSAVKVG 177 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSH----HHHHHHHHHHHHCTTCEEEEE-EECSHHH-HHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCH----HHHHHHHHHHHhcCCCceEee-eeCCHHH-HHHHHHcCCCEEEEe
Confidence 45778899999999999998777531 1124566777643 5554332 2445543 567889999999993
No 290
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=68.30 E-value=43 Score=29.15 Aligned_cols=123 Identities=17% Similarity=0.108 Sum_probs=77.7
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++ ++..+++-.. |..+
T Consensus 15 ~iD~~~l~~lv~~li~~Gv~gl~v~---GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~g-vi~G 70 (286)
T 2r91_A 15 RLDPELFANHVKNITSKGVDVVFVA---GTTGLGPALSLQEKMEL--------------------TDAATSAARR-VIVQ 70 (286)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEET---STTTTGGGSCHHHHHHH--------------------HHHHHHHCSS-EEEE
T ss_pred ccCHHHHHHHHHHHHHCCCCEEEEC---ccccChhhCCHHHHHHH--------------------HHHHHHHhCC-EEEe
Confidence 5789999999999999998876432 22222344554433332 3334443223 7777
Q ss_pred cCCcccccHHHHHHHHHHcCCcEEEEEcCCC----ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHH
Q 025927 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT----SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKK 212 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T----pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~K 212 (246)
.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|+=+++==.||..|..+.++++.+
T Consensus 71 vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 71 VASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp CCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 7543455566677777889999999988863 223333 334445653444445888899999988865
No 291
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=68.02 E-value=13 Score=31.57 Aligned_cols=85 Identities=11% Similarity=-0.005 Sum_probs=55.8
Q ss_pred CCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 100 ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 100 ~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
.+|.++.++.+|+. .++++ .-|.-..+..+.+.+.+.|++.+..++... . .++++.++++|+++-+.= .+ ..
T Consensus 150 ~SF~~~~l~~~~~~~p~~~~-~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~~v~~~~~~G~~v~~wT-vn-~~ 222 (252)
T 2pz0_A 150 SSFNHYSLRDVKKMAPHLKI-GLLYQCGLVEPWHMALRMEAYSLHPFYFNI---I-PELVEGCKKNGVKLFPWT-VD-RK 222 (252)
T ss_dssp EESBHHHHHHHHHHCTTSEE-EEEECSBCSSTHHHHHHTTCSEEEEBGGGC---C-HHHHHHHHHTTCEECCBC-CC-SH
T ss_pred EeCCHHHHHHHHHHCCCCCE-EEEecCccccHHHHHHHcCCeEEecchhcC---C-HHHHHHHHHCCCEEEEEC-CC-CH
Confidence 48899999999875 34443 223333445566667778999998887642 2 467889999998875542 22 34
Q ss_pred HHHHHhhhh-cceE
Q 025927 179 SAIECVLDV-VDLV 191 (246)
Q Consensus 179 e~l~~~l~~-vD~V 191 (246)
+.+..+++. +|.|
T Consensus 223 ~~~~~l~~~GvdgI 236 (252)
T 2pz0_A 223 EDMERMIKAGVDGI 236 (252)
T ss_dssp HHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEE
Confidence 566666653 7774
No 292
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=67.93 E-value=52 Score=29.25 Aligned_cols=126 Identities=11% Similarity=0.049 Sum_probs=71.2
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+= .=|+--...++..+.-+++- +..++. |---|.
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~---v~GtTGE~~~Ls~~Er~~v~--------------------~~~v~~~~grvpVi 95 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVS---PVGTTGESPTLTHEEHKRII--------------------ELCVEQVAKRVPVV 95 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEE---CSSTTTTGGGSCHHHHHHHH--------------------HHHHHHHTTSSCBE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEE---eCccccCccccCHHHHHHHH--------------------HHHHHHhCCCCcEE
Confidence 58999999999999999998773 33444444556555444331 122221 111233
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|+=+++==.||..|..+.++++.++.
T Consensus 96 aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 173 (315)
T 3si9_A 96 AGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLC 173 (315)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHH
Confidence 344322344455566666677777777776652 112222 22334555344444577777777777776664
No 293
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=67.92 E-value=18 Score=30.23 Aligned_cols=40 Identities=13% Similarity=-0.017 Sum_probs=22.3
Q ss_pred ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEE
Q 025927 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAG 169 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~G 169 (246)
+..++...++|.+.|-+.... ..++.++.+.+++.|+++.
T Consensus 26 ~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 26 LERFRLAAEAGFGGVEFLFPY--DFDADVIARELKQHNLTQV 65 (269)
T ss_dssp HHHHHHHHHTTCSEEECSCCT--TSCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEecCCc--cCCHHHHHHHHHHcCCcEE
Confidence 345555566666666654321 2345556666666666654
No 294
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=67.90 E-value=15 Score=34.54 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=74.3
Q ss_pred CCeeEEEeccC-----cccchHHHHhc--CCCEEEEccCCc---------ccccHHHHHHHHHHc---------------
Q 025927 116 LPLDVHLMIVE-----PEQRVPDFIKA--GADIVSVHCEQS---------STIHLHRTLNQIKDL--------------- 164 (246)
Q Consensus 116 ~plDvHLMV~~-----P~~~i~~~~~a--gad~It~H~E~~---------~~~~~~~~i~~Ik~~--------------- 164 (246)
.++-+-+--.. ++.|++-+... -+|+|.+-+-+= ..+.+.++++.+|+.
T Consensus 182 ~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~ 261 (415)
T 3i65_A 182 HIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFL 261 (415)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHH
T ss_pred ceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhccccccccccc
Confidence 35555664433 56666533222 388888765310 112356777777764
Q ss_pred ------CCc-EEEEEcCCCChHHHHHhhh-----hcceEEEEeec-------------CCCCCCcccHHHHHHHHHHHHH
Q 025927 165 ------GAK-AGVVLNPATSLSAIECVLD-----VVDLVLIMSVN-------------PGFGGQSFIESQVKKISDLRRM 219 (246)
Q Consensus 165 ------G~k-~GlAlnP~Tpve~l~~~l~-----~vD~VLvMsV~-------------PGfgGQ~F~~~~l~KI~~lr~l 219 (246)
..- +.|=|.|+.+.+.+.++.. -+|.|.+-..- -|++|.+..|.+++-|+++++.
T Consensus 262 ~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~ 341 (415)
T 3i65_A 262 WFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY 341 (415)
T ss_dssp CCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH
T ss_pred ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHH
Confidence 345 6888999987655555433 28888775321 2456777788888888888876
Q ss_pred HHhcCCCCeEEEeCCCCh
Q 025927 220 CLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 220 ~~~~~~~~~I~VDGGI~~ 237 (246)
... ++.|-.+|||+.
T Consensus 342 v~~---~iPIIg~GGI~s 356 (415)
T 3i65_A 342 TNK---QIPIIASGGIFS 356 (415)
T ss_dssp TTT---CSCEEECSSCCS
T ss_pred hCC---CCCEEEECCCCC
Confidence 532 467889999974
No 295
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=67.68 E-value=16 Score=31.47 Aligned_cols=104 Identities=7% Similarity=0.003 Sum_probs=61.0
Q ss_pred CcccchHHHHhcCCCEEEEccCC---cccccHHHHHHHHHHcCCcEE-EEEcC-----CCC----------------hHH
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQ---SSTIHLHRTLNQIKDLGAKAG-VVLNP-----ATS----------------LSA 180 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~---~~~~~~~~~i~~Ik~~G~k~G-lAlnP-----~Tp----------------ve~ 180 (246)
..+..++..+++|.+.|-+.... ....++.++.+.+++.|+++- +.... ..| ++.
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 109 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEY 109 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHH
Confidence 45577888899999999876421 112357788888999999983 33221 112 234
Q ss_pred HHHhhhh-----cceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCC--CeEE
Q 025927 181 IECVLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVN--PWIE 230 (246)
Q Consensus 181 l~~~l~~-----vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~--~~I~ 230 (246)
++..++. +..|.+.+..++ ....-.....+.++++-++..+.|.. +-+|
T Consensus 110 ~~~~i~~A~~lG~~~v~~~~~~~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 110 WKATAADHAKLGCKYLIQPMMPTI-TTHDEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp HHHHHHHHHHTTCSEEEECSCCCC-CSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 4444443 566665432221 11112244566777777787888877 5554
No 296
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=67.58 E-value=20 Score=33.09 Aligned_cols=124 Identities=20% Similarity=0.200 Sum_probs=73.1
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccC------------------cc------------cC------------------
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDG------------------RF------------VP------------------ 98 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG------------------~F------------Vp------------------ 98 (246)
.|.....+.+++++++|++.+=+.+ |. +. .|
T Consensus 157 ~d~~~~~~~~~ra~~~G~~al~itv-d~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~ 235 (392)
T 2nzl_A 157 KDREVTKKLVRQAEKMGYKAIFVTV-DTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAI 235 (392)
T ss_dssp SSHHHHHHHHHHHHHTTCCCEEEEC-SCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHB
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC-CCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcC
Confidence 6878888999999999998876643 11 00 01
Q ss_pred CCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCC---c-ccccHHHHHHHHHHc-CCcEEEEEc
Q 025927 99 NITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ---S-STIHLHRTLNQIKDL-GAKAGVVLN 173 (246)
Q Consensus 99 N~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~---~-~~~~~~~~i~~Ik~~-G~k~GlAln 173 (246)
+-.+..+.|+++|+.++.|+-+-. +..++ ....+.++|+|.|+++--. . ........+..+++. +-++=|..+
T Consensus 236 d~~~~~~~i~~lr~~~~~PvivKg-v~~~e-~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~ 313 (392)
T 2nzl_A 236 DPSISWEDIKWLRRLTSLPIVAKG-ILRGD-DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD 313 (392)
T ss_dssp CTTCCHHHHHHHC--CCSCEEEEE-ECCHH-HHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC
T ss_pred ChHHHHHHHHHHHHhhCCCEEEEe-cCCHH-HHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE
Confidence 223566789999998899988874 34444 4678889999999994210 0 011233455555543 223444554
Q ss_pred CC-CChHHHHHhhh-hcceEEE
Q 025927 174 PA-TSLSAIECVLD-VVDLVLI 193 (246)
Q Consensus 174 P~-Tpve~l~~~l~-~vD~VLv 193 (246)
-+ ..-+++.+.|. -+|.|.+
T Consensus 314 GGI~~g~Dv~kalalGAd~V~i 335 (392)
T 2nzl_A 314 GGVRKGTDVLKALALGAKAVFV 335 (392)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCCHHHHHHHHHhCCCeeEE
Confidence 44 23344444433 4777766
No 297
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=67.47 E-value=15 Score=34.23 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=70.3
Q ss_pred cEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 58 ~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
+.+..++-.-| .+.++.+.++|+|.+=+|..-|+- .--++.|+++|+..+.++-+. -|..+ ...+.+.++
T Consensus 135 l~v~~~v~~~~----~e~~~~lveaGvdvIvldta~G~~----~~~~e~I~~ik~~~~i~Vi~g-~V~t~-e~A~~a~~a 204 (400)
T 3ffs_A 135 LRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAHGHS----LNIIRTLKEIKSKMNIDVIVG-NVVTE-EATKELIEN 204 (400)
T ss_dssp BCCEEEECCC-----CHHHHHHHHHTCSEEEECCSCCSB----HHHHHHHHHHHTTCCCEEEEE-EECSH-HHHHHHHHT
T ss_pred eeEEeecCCCH----HHHHHHHHHcCCCEEEEeCCCCCc----ccHHHHHHHHHhcCCCeEEEe-ecCCH-HHHHHHHHc
Confidence 44444444333 578999999999999777665431 011467888877556665543 23344 346678899
Q ss_pred CCCEEEEccCCc-----------ccccHHHHHHHHHHc--CCcEEEEEcCC-CChHHHHHhhhh-cceEEE
Q 025927 138 GADIVSVHCEQS-----------STIHLHRTLNQIKDL--GAKAGVVLNPA-TSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 138 gad~It~H~E~~-----------~~~~~~~~i~~Ik~~--G~k~GlAlnP~-Tpve~l~~~l~~-vD~VLv 193 (246)
|+|.|.+..+.- ...+ ...+..+.+. ...+=|.-.=+ ...+.+...+.. +|.|.+
T Consensus 205 GAD~I~vG~g~Gs~~~tr~~~g~g~p~-~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~v 274 (400)
T 3ffs_A 205 GADGIKVGIGPGSICTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274 (400)
T ss_dssp TCSEEEECC---------CCSCBCCCH-HHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEE
T ss_pred CCCEEEEeCCCCcCcccccccccchhH-HHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 999999965421 0112 2344444432 11222222223 345666666654 888876
No 298
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=67.45 E-value=32 Score=30.62 Aligned_cols=125 Identities=18% Similarity=0.164 Sum_probs=68.4
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++ ++..++. |---|.
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v~---GtTGE~~~Ls~~Er~~v--------------------~~~~v~~~~grvpVi 97 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAPL---GSTGEGAYLSDPEWDEV--------------------VDFTLKTVAHRVPTI 97 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEECS---SGGGTGGGSCHHHHHHH--------------------HHHHHHHHTTSSCBE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEC---ccccChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5899999999999999999876333 33333345555443333 2222221 111233
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHHH----hhhhcceEEEEeecCCCCCCcccHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIEC----VLDVVDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~~----~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
.+.=+.++.+..+..+..++.|+.+-+++.|.. +-+.+.. +.+.+|+=+++==.|+..|..+.++++.++
T Consensus 98 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 98 VSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 444322234445556666677777777776641 1222222 233445433333457777777777777666
No 299
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=67.44 E-value=7.2 Score=34.88 Aligned_cols=102 Identities=12% Similarity=0.103 Sum_probs=67.4
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEec---cCcccchHHHHhcCCCEEEE
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMI---VEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV---~~P~~~i~~~~~agad~It~ 144 (246)
.+...-+..+.++++|+|.+ |++.+. .++.++.+.+..++|+- |+ ..|..-.++|.+.|+.+|++
T Consensus 166 gl~~ai~Ra~ay~eAGAd~i--------~~e~~~-~~~~~~~i~~~~~~P~i---i~~~g~~~~~~~~eL~~lGv~~v~~ 233 (287)
T 3b8i_A 166 DVDAVIQRTLAYQEAGADGI--------CLVGVR-DFAHLEAIAEHLHIPLM---LVTYGNPQLRDDARLARLGVRVVVN 233 (287)
T ss_dssp CHHHHHHHHHHHHHTTCSEE--------EEECCC-SHHHHHHHHTTCCSCEE---EECTTCGGGCCHHHHHHTTEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEE--------EecCCC-CHHHHHHHHHhCCCCEE---EeCCCCCCCCCHHHHHHcCCcEEEE
Confidence 34556677788889999976 444321 36788888776678876 54 34667789999999999999
Q ss_pred ccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh
Q 025927 145 HCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL 185 (246)
Q Consensus 145 H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l 185 (246)
..-..- .-....++.|++.|-.. ...-.+.+++..++
T Consensus 234 ~~~~~r-aa~~a~~~~l~~~g~~~---~~~~~~~~el~~l~ 270 (287)
T 3b8i_A 234 GHAAYF-AAIKATYDCLREERGAV---ASDLTASELSKKYT 270 (287)
T ss_dssp CCHHHH-HHHHHHHHHHHHHHTCC---CCCSCHHHHHHHTT
T ss_pred ChHHHH-HHHHHHHHHHHHcCCCC---cccCCCHHHHHHHh
Confidence 865320 01122777888877443 33345666666665
No 300
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=67.41 E-value=17 Score=29.83 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc-
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS- 149 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~- 149 (246)
...+.++.+.+.|+|++=+=-.+..+.. ..+..+.++.+++.+++|+-+===+.++++. .++.++|++.+.+=---.
T Consensus 155 ~~~e~~~~~~~~G~d~i~~~~~~~~g~~-~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~-~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 155 DAVKWAKEVEELGAGEILLTSIDRDGTG-LGYDVELIRRVADSVRIPVIASGGAGRVEHF-YEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTTC-SCCCHHHHHHHHHHCSSCEEEESCCCSHHHH-HHHHHTTCSEEEESHHHHT
T ss_pred CHHHHHHHHHhCCCCEEEEecccCCCCc-CcCCHHHHHHHHHhcCCCEEEeCCCCCHHHH-HHHHHcCCcHHHHHHHHHc
Confidence 4556688888999999865322221111 2457788999988766665443334455554 456689999887631100
Q ss_pred ccccHHHHHHHHHHcCCc
Q 025927 150 STIHLHRTLNQIKDLGAK 167 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~~G~k 167 (246)
....+.++++++++.|+.
T Consensus 233 ~~~~~~~~~~~l~~~g~~ 250 (253)
T 1h5y_A 233 RVLSIAQVKRYLKERGVE 250 (253)
T ss_dssp TSSCHHHHHHHHHHTTCB
T ss_pred CCCCHHHHHHHHHHcCCC
Confidence 123577888888888875
No 301
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=67.39 E-value=7.7 Score=33.02 Aligned_cols=71 Identities=18% Similarity=0.189 Sum_probs=47.1
Q ss_pred HHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHH
Q 025927 77 KAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHR 156 (246)
Q Consensus 77 ~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~ 156 (246)
+.+.+.|++.+|.+.- .+.++.++.+++. ++ .|+..+-|....++.+.+.|+|.|+ ++.|..
T Consensus 182 ~~~~~~~~~~i~~~~~--------~~~~~~v~~~~~~-G~--~v~~wTvn~~~~~~~l~~~GvdgIi-------TD~P~~ 243 (252)
T 2pz0_A 182 HMALRMEAYSLHPFYF--------NIIPELVEGCKKN-GV--KLFPWTVDRKEDMERMIKAGVDGII-------TDDPET 243 (252)
T ss_dssp HHHHHTTCSEEEEBGG--------GCCHHHHHHHHHT-TC--EECCBCCCSHHHHHHHHHHTCSEEE-------ESCHHH
T ss_pred HHHHHcCCeEEecchh--------cCCHHHHHHHHHC-CC--EEEEECCCCHHHHHHHHHcCCCEEE-------cCCHHH
Confidence 3455668899997642 2358899988764 43 4566666666667888999999887 346766
Q ss_pred HHHHHHHcC
Q 025927 157 TLNQIKDLG 165 (246)
Q Consensus 157 ~i~~Ik~~G 165 (246)
+.+.+++.|
T Consensus 244 ~~~~l~~~~ 252 (252)
T 2pz0_A 244 LINLVRKGG 252 (252)
T ss_dssp HHHHHC---
T ss_pred HHHHHhhcC
Confidence 666655544
No 302
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=67.21 E-value=32 Score=30.15 Aligned_cols=126 Identities=17% Similarity=0.122 Sum_probs=72.5
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=|.| .++..+.-+++ ++..++. |---|.
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~---~~Lt~~Er~~v--------------------~~~~~~~~~grvpvi 75 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAES---PTLTTDEKELI--------------------LKTVIDLVDKRVPVI 75 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTG---GGSCHHHHHHH--------------------HHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccccc---ccCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5899999999999999999987444333333 45555443333 2222221 222344
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHHH----hhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIEC----VLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~~----~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.|.=+.++.+..+..++.++.|+.+-+++.|.. +-+.+.. +.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 76 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 153 (292)
T 3daq_A 76 AGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILS 153 (292)
T ss_dssp EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHh
Confidence 454322344555566666777777777777651 1122222 2333455444445577778888888776664
No 303
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=67.09 E-value=57 Score=27.53 Aligned_cols=144 Identities=19% Similarity=0.208 Sum_probs=81.8
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC--CCCCeeEEEeccC-----c-----ccchHHH
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVE-----P-----EQRVPDF 134 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~--t~~plDvHLMV~~-----P-----~~~i~~~ 134 (246)
.+..++.+.++.+++.|++.+=++ . .+++.+++. .+.|+-+|+--.. | ...++..
T Consensus 42 ~~~~~~~~~~~~~~~~g~~~i~~~---~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a 108 (273)
T 2qjg_A 42 KGLIDIRKTVNDVAEGGANAVLLH---K----------GIVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEA 108 (273)
T ss_dssp TTSSSHHHHHHHHHHHTCSEEEEC---H----------HHHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECSCHHHH
T ss_pred cchhhHHHHHHHHHhcCCCEEEeC---H----------HHHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHH
Confidence 356677788889999999998542 1 234444331 2456666765433 2 4567788
Q ss_pred HhcCCCEEEEccC--Cccc----ccHHHHHHHHHHcCCcEEEEEcC-------CCChHHHHHhhh-----hcceEEEEee
Q 025927 135 IKAGADIVSVHCE--QSST----IHLHRTLNQIKDLGAKAGVVLNP-------ATSLSAIECVLD-----VVDLVLIMSV 196 (246)
Q Consensus 135 ~~agad~It~H~E--~~~~----~~~~~~i~~Ik~~G~k~GlAlnP-------~Tpve~l~~~l~-----~vD~VLvMsV 196 (246)
.++|++.|.+++- .... ....++.+.+++.|+.+=+-+.+ +.+.+.++.... -+|+|-+
T Consensus 109 ~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~--- 185 (273)
T 2qjg_A 109 IRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKT--- 185 (273)
T ss_dssp HHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEE---
T ss_pred HHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEE---
Confidence 8999999955531 1111 13456677778889887543321 123333333212 2787654
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCChhh
Q 025927 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKN 239 (246)
Q Consensus 197 ~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~e~ 239 (246)
.|+ .. ++.++++++.. +..+-+=|||+.+|
T Consensus 186 ~~~-----~~---~~~l~~i~~~~-----~ipvva~GGi~~~~ 215 (273)
T 2qjg_A 186 SYT-----GD---IDSFRDVVKGC-----PAPVVVAGGPKTNT 215 (273)
T ss_dssp CCC-----SS---HHHHHHHHHHC-----SSCEEEECCSCCSS
T ss_pred CCC-----CC---HHHHHHHHHhC-----CCCEEEEeCCCCCC
Confidence 231 12 34444444432 34577899999766
No 304
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=66.91 E-value=41 Score=30.61 Aligned_cols=151 Identities=16% Similarity=0.152 Sum_probs=80.9
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCC-eeEEEecc-CcccchHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP-LDVHLMIV-EPEQRVPDF 134 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~p-lDvHLMV~-~P~~~i~~~ 134 (246)
.+.+.+.+=+-. ...-++.+.++|+ .+|+.- ...+..+++. +++ -++|+.-. .+...++..
T Consensus 61 ~~~~~~avKan~---~~~v~~~l~~~G~---g~~vas----------~~E~~~~~~~-G~~~~~I~~~g~~k~~~~i~~a 123 (434)
T 1twi_A 61 EFIVAYAYKANA---NLAITRLLAKLGC---GADVVS----------GGELYIAKLS-NVPSKKIVFNGNCKTKEEIIMG 123 (434)
T ss_dssp CEEEEEEGGGCC---CHHHHHHHHHTTC---EEEECS----------HHHHHHHHHT-TCCGGGEEECCSSCCHHHHHHH
T ss_pred CeEEEEEEccCC---CHHHHHHHHHcCC---cEEEeC----------HHHHHHHHHC-CCCCCcEEEECCCCCHHHHHHH
Confidence 455555544332 2233455566664 455543 3456666653 443 56776654 345667777
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHHHcC--CcEEEEEcCCC-------------------ChHH--HHHhhh-----
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLG--AKAGVVLNPAT-------------------SLSA--IECVLD----- 186 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik~~G--~k~GlAlnP~T-------------------pve~--l~~~l~----- 186 (246)
++.|...+++.-+ ..+.++-+..++.| .+++|-+||+. +.+. +..++.
T Consensus 124 ~~~~i~~~~vds~----~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tG~~~~rfG~~~~~~~~~~~~~~~~~~ 199 (434)
T 1twi_A 124 IEANIRAFNVDSI----SELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEM 199 (434)
T ss_dssp HHTTCSEEEECSH----HHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHHHHHHHHC
T ss_pred HHCCCCEEEECCH----HHHHHHHHHHHhcCCCCeEEEEECCCCCCCCCcccccCCCCCCccCChhhhHHHHHHHHHHhC
Confidence 7877656776543 34555555556666 46788888762 1233 433332
Q ss_pred -hcceEEEEee-cCCCCCCcccHHHHHHHHHHHHHHHhcCCCCe
Q 025927 187 -VVDLVLIMSV-NPGFGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 187 -~vD~VLvMsV-~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
.++++=+|+= -+...........++++.++.+.+.+.|.++.
T Consensus 200 ~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 243 (434)
T 1twi_A 200 EYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIE 243 (434)
T ss_dssp SSEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3555566663 11111111223456777766666666676654
No 305
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=66.88 E-value=11 Score=31.62 Aligned_cols=48 Identities=10% Similarity=0.104 Sum_probs=29.8
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhccc---CCCCCeeEEE
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP---VTDLPLDVHL 122 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~---~t~~plDvHL 122 (246)
..+.+.++.+.+.|.+.+-+...+.... .+..++++++ ..++.+..|.
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~-----~~~~~~~~~~~l~~~gl~~~~~~ 67 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFHNL-----SDAKKRELKAVADDLGLTVMCCI 67 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGGGS-----CHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCcccc-----chhhHHHHHHHHHHcCCceEEec
Confidence 3578888999999999888765543221 1244444443 2467666664
No 306
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=66.65 E-value=35 Score=28.94 Aligned_cols=66 Identities=9% Similarity=0.087 Sum_probs=45.8
Q ss_pred cchHHHHhcCCCEEEE-----ccCCcccccHHHHHHHHHHc---CCcEEEEEcCCCChHHHHHhhh-hcceEEEEe
Q 025927 129 QRVPDFIKAGADIVSV-----HCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLD-VVDLVLIMS 195 (246)
Q Consensus 129 ~~i~~~~~agad~It~-----H~E~~~~~~~~~~i~~Ik~~---G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMs 195 (246)
+-++.+.++|+|++.+ |+=...... ..+++.||+. .....+=|..++|-..++.+.+ -+|+|++..
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G-~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~ 95 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFG-HPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHL 95 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBC-HHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccC-HHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEcc
Confidence 4466777889999999 752110111 2478888877 4556777778888888888766 489999964
No 307
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=66.60 E-value=36 Score=30.45 Aligned_cols=148 Identities=14% Similarity=0.130 Sum_probs=83.1
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcc-----cchHHHHhcCCCEEEE
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE-----QRVPDFIKAGADIVSV 144 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~-----~~i~~~~~agad~It~ 144 (246)
.+|.+.+++|...+.+. ++|.||.=-..-.-..++...|++.++++.-.||-..+-. .++..+.++|++-|-.
T Consensus 39 ~~l~~~~~~l~~l~p~f--vsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILa 116 (304)
T 3fst_A 39 QTLWNSIDRLSSLKPKF--VSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVA 116 (304)
T ss_dssp HHHHHHHHHHHTTCCSE--EEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCCE--EEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 44667789999888888 6777764321100012244456655789999999887532 2455666788764442
Q ss_pred c----cCC--cccccHHHHHHHHHH-cCCcEEEEEcCCC-----Ch-HHHHHhhhhcce-EEEEeecCCCCCCcccHHHH
Q 025927 145 H----CEQ--SSTIHLHRTLNQIKD-LGAKAGVVLNPAT-----SL-SAIECVLDVVDL-VLIMSVNPGFGGQSFIESQV 210 (246)
Q Consensus 145 H----~E~--~~~~~~~~~i~~Ik~-~G~k~GlAlnP~T-----pv-e~l~~~l~~vD~-VLvMsV~PGfgGQ~F~~~~l 210 (246)
= ... ....+...+++.||+ .+..+|+|-.|+. +. .++..+..++|. .-..-.++.| +.+.+
T Consensus 117 LrGDpp~~~~~~~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ff-----D~~~~ 191 (304)
T 3fst_A 117 LRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFF-----DVESY 191 (304)
T ss_dssp ECCCCC------CCCHHHHHHHHHHHCCCEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEECCCS-----CHHHH
T ss_pred ecCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeCccC-----CHHHH
Confidence 1 100 012356678888886 4588899998753 22 345555555432 1112244444 44444
Q ss_pred HHHHHHHHHHHhcCCCC
Q 025927 211 KKISDLRRMCLEKGVNP 227 (246)
Q Consensus 211 ~KI~~lr~l~~~~~~~~ 227 (246)
. ++.+.+.+.|.+.
T Consensus 192 ~---~f~~~~r~~Gi~v 205 (304)
T 3fst_A 192 L---RFRDRCVSAGIDV 205 (304)
T ss_dssp H---HHHHHHHHTTCCS
T ss_pred H---HHHHHHHhcCCCC
Confidence 3 3444455566543
No 308
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=66.43 E-value=14 Score=30.65 Aligned_cols=42 Identities=0% Similarity=-0.020 Sum_probs=20.3
Q ss_pred cccchHHHHhcCCCEEEEccCCc----ccccHHHHHHHHHHcCCcE
Q 025927 127 PEQRVPDFIKAGADIVSVHCEQS----STIHLHRTLNQIKDLGAKA 168 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~E~~----~~~~~~~~i~~Ik~~G~k~ 168 (246)
++..++...++|.+.|-+..... ...++.++.+.+++.|+++
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i 77 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTG 77 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 34455555556666555543310 1122345555555666654
No 309
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=66.24 E-value=43 Score=30.18 Aligned_cols=127 Identities=19% Similarity=0.142 Sum_probs=71.7
Q ss_pred cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEE
Q 025927 65 LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIV 142 (246)
Q Consensus 65 l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~I 142 (246)
-..|+..+++.++.+.+.|++.+=+==.=|. ..++..+.-+++ ++..+++ |---|
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE---~~~Ls~eEr~~v--------------------i~~~ve~~~grvpV 103 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGE---FSQLGAEERKAI--------------------ARFAIDHVDRRVPV 103 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTT---GGGSCHHHHHHH--------------------HHHHHHHHTTSSCE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccC---hhhCCHHHHHHH--------------------HHHHHHHhCCCCcE
Confidence 3589999999999999999886543322232 345555433333 2222221 21224
Q ss_pred EEccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 143 SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 143 t~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
..+.=+.++.+..+..+..++.|+.+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 104 iaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 104 LIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp EEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 4554432344455566666777888777777753 223332 22334454333334577778888888877664
No 310
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=66.23 E-value=24 Score=27.87 Aligned_cols=83 Identities=18% Similarity=0.188 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecCC-------CCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 025927 155 HRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPG-------FGGQSFIESQVKKISDLRRMCLEKGVNP 227 (246)
Q Consensus 155 ~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~PG-------fgGQ~F~~~~l~KI~~lr~l~~~~~~~~ 227 (246)
.++++++|+.|+++.+.=|-..+-+.++.+++.+|.|. ++++-. +.|.++ +.+++.|+.+++ .|..+
T Consensus 22 ~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~~d~v~-isld~~~~~~~~~~~g~~~-~~i~~~i~~l~~----~g~~v 95 (182)
T 3can_A 22 IDILKRCGQQGIHRAVDTTLLARKETVDEVMRNCELLL-IDLKSMDSTVHQTFCDVPN-ELILKNIRRVAE----ADFPY 95 (182)
T ss_dssp HHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHTCSEEE-EECCCSCHHHHHHHHSSCS-HHHHHHHHHHHH----TTCCE
T ss_pred HHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhhCCEEE-EECCCCCHHHHHHHhCCCH-HHHHHHHHHHHh----CCCeE
Confidence 58899999999998887776555677888888888744 455421 123344 566666665544 34444
Q ss_pred e--EEEeCCCC--hhhhhhc
Q 025927 228 W--IEVDGGVG--PKNAYKV 243 (246)
Q Consensus 228 ~--I~VDGGI~--~e~i~~l 243 (246)
. +-+--|+| .+.+..+
T Consensus 96 ~i~~~v~~~~n~n~~~~~~~ 115 (182)
T 3can_A 96 YIRIPLIEGVNADEKNIKLS 115 (182)
T ss_dssp EEEEEECBTTTCSHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHH
Confidence 4 33455554 3455444
No 311
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=66.17 E-value=33 Score=33.61 Aligned_cols=101 Identities=19% Similarity=0.185 Sum_probs=60.6
Q ss_pred cchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcE-EEEEcCCCChHHHHHhhh-hcceEEEEeecCCC------
Q 025927 129 QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKA-GVVLNPATSLSAIECVLD-VVDLVLIMSVNPGF------ 200 (246)
Q Consensus 129 ~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~-GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGf------ 200 (246)
..++.|+++|+|.|.+-.-.--.....+.+++||+.--.+ =+|=|-.|. +..+.+++ -+|.|-| .+=||-
T Consensus 284 eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~-e~a~~Li~aGAD~vkV-GiGpGSiCtTr~ 361 (556)
T 4af0_A 284 DRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTR-EQAAQLIAAGADGLRI-GMGSGSICITQE 361 (556)
T ss_dssp HHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSH-HHHHHHHHHTCSEEEE-CSSCSTTBCCTT
T ss_pred HHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCH-HHHHHHHHcCCCEEee-cCCCCccccccc
Confidence 4577899999999998543211345678889999875333 344455554 55555554 4887554 555552
Q ss_pred ---CCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 201 ---GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 201 ---gGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
-|-+. +.-|.+..+...+. ...|..||||+.
T Consensus 362 v~GvG~PQ----~tAi~~~a~~a~~~--~vpvIADGGI~~ 395 (556)
T 4af0_A 362 VMAVGRPQ----GTAVYAVAEFASRF--GIPCIADGGIGN 395 (556)
T ss_dssp TCCSCCCH----HHHHHHHHHHHGGG--TCCEEEESCCCS
T ss_pred ccCCCCcH----HHHHHHHHHHHHHc--CCCEEecCCcCc
Confidence 13332 22334444444444 356889999975
No 312
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=65.96 E-value=46 Score=29.26 Aligned_cols=126 Identities=17% Similarity=0.123 Sum_probs=72.0
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++- +..++. |---|.
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~---GtTGE~~~Ls~eEr~~v~--------------------~~~~~~~~grvpVi 85 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDNGTTAIVVG---GTTGESPTLTSEEKVALY--------------------RHVVSVVDKRVPVI 85 (301)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEES---STTTTGGGSCHHHHHHHH--------------------HHHHHHHTTSSCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEC---ccccChhhCCHHHHHHHH--------------------HHHHHHhCCCceEE
Confidence 5789999999999999999876443 333233455554443331 112211 211244
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|+.+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 86 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 86 AGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred eCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 454332334455566666777888777777753 223333 22334454333444577788888888877664
No 313
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=65.95 E-value=22 Score=32.12 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=66.4
Q ss_pred HHHHHHH---HHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEec--cCcccchHHHHhcCCCEEEEc
Q 025927 72 LGEQVKA---VELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMI--VEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 72 l~~~i~~---l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV--~~P~~~i~~~~~agad~It~H 145 (246)
+++.|++ +.++|+|.+ |+|.+. .++.++.+.+. .+.|+-+-++. ..|..-.++|.+.|+.+|+++
T Consensus 177 ldeAi~Ra~ay~eAGAD~i--------fi~~~~-~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~ 247 (307)
T 3lye_A 177 YEECIERLRAARDEGADVG--------LLEGFR-SKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFS 247 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEE--------EECCCS-CHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEE--------EecCCC-CHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHcCCeEEEEC
Confidence 4455544 557898765 666542 56777777663 34777553332 245556789999999999998
Q ss_pred cCCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh
Q 025927 146 CEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV 187 (246)
Q Consensus 146 ~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~ 187 (246)
.-.. +..-..+.++.|++.|-. +. ....+.+++.+++.+
T Consensus 248 ~~~~raa~~a~~~~~~~l~~~g~~-~~--~~~~~~~el~~~~g~ 288 (307)
T 3lye_A 248 FATLAPAYAAIRETLVRLRDHGVV-GT--PDGITPVRLFEVCGL 288 (307)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHSCC-CC--CTTCCHHHHHHHTTH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCC-Cc--cccCCHHHHHHhcCh
Confidence 6432 123467888899998865 32 334566766666543
No 314
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=65.87 E-value=28 Score=31.94 Aligned_cols=81 Identities=15% Similarity=0.102 Sum_probs=47.2
Q ss_pred CCCCeeEEEeccCccc-chHHHHhcCCCEEEEccCCc-------c---cccHHHHHHHHHHc-CCcEEEEE-cCCCChHH
Q 025927 114 TDLPLDVHLMIVEPEQ-RVPDFIKAGADIVSVHCEQS-------S---TIHLHRTLNQIKDL-GAKAGVVL-NPATSLSA 180 (246)
Q Consensus 114 t~~plDvHLMV~~P~~-~i~~~~~agad~It~H~E~~-------~---~~~~~~~i~~Ik~~-G~k~GlAl-nP~Tpve~ 180 (246)
.+.++-+=|-...+.. +.+..-.+|+|.+.+|.... . ...+.+.++++|+. ++.+.+-. .-+.+.+.
T Consensus 143 P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~ 222 (365)
T 3sr7_A 143 PHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKT 222 (365)
T ss_dssp --CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHH
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHH
Confidence 4556655555555543 34344468999999997531 0 11344678888865 55555552 12256677
Q ss_pred HHHhhhh-cceEEEE
Q 025927 181 IECVLDV-VDLVLIM 194 (246)
Q Consensus 181 l~~~l~~-vD~VLvM 194 (246)
.+.+.+. +|.|.|=
T Consensus 223 A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 223 IQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHTCCEEECC
T ss_pred HHHHHHcCCCEEEEe
Confidence 7776654 8998863
No 315
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=65.80 E-value=28 Score=29.83 Aligned_cols=131 Identities=8% Similarity=-0.016 Sum_probs=68.9
Q ss_pred CCCCCcEEeeeecccChhhH-HHHHHHHHHcCCCEEEeeeccCcccCCCCCCH----HHHhhccc---CCCCCeeEEEe-
Q 025927 53 FSKSDIIVSPSILSANFAKL-GEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRP---VTDLPLDVHLM- 123 (246)
Q Consensus 53 ~~~~~~~IsPSIl~aD~~~l-~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp----~~I~~ir~---~t~~plDvHLM- 123 (246)
++++++-|+...+.-++..- +..++.+.+.|.+.+-+-..+.. | .+.. ..++++|+ -.++.+..+.-
T Consensus 17 ~~~~~lgi~~~~~~~~~~~~~~~~~~~a~~~G~~~vEl~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~ 92 (316)
T 3qxb_A 17 FQGMKLGVNLCFAVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTD--P--WWPDIERDRRAIAYAKAFRKAGLTIESTFGG 92 (316)
T ss_dssp --CCCEEEEGGGGTTTSCSHHHHHHHHHHTSCCCEEEEETTTSC--T--TSCHHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eccccceecchHHHhccCCHHHHHHHHHHHcCCCEEEeeccccC--c--cccccchhhHHHHHHHHHHHcCCeEEEeecc
Confidence 44445666666666665443 34456778899999888543321 1 1111 13444433 35665543211
Q ss_pred ----------ccCcc----------cchHHHHhcCCCEEEEccCCc-----------------ccccHHHHHHHHHHcCC
Q 025927 124 ----------IVEPE----------QRVPDFIKAGADIVSVHCEQS-----------------STIHLHRTLNQIKDLGA 166 (246)
Q Consensus 124 ----------V~~P~----------~~i~~~~~agad~It~H~E~~-----------------~~~~~~~~i~~Ik~~G~ 166 (246)
..+|+ +.++...+.|+.+|..|+-.. ..+.+.++....++.|+
T Consensus 93 ~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 172 (316)
T 3qxb_A 93 LASYTYNHFLAPTLELQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGL 172 (316)
T ss_dssp HHHHTSCBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11222 234444567999998875320 01123445556677888
Q ss_pred cEEEEEcC-------CCChHHHHHhhhhc
Q 025927 167 KAGVVLNP-------ATSLSAIECVLDVV 188 (246)
Q Consensus 167 k~GlAlnP-------~Tpve~l~~~l~~v 188 (246)
+ .|++-| ...++.+..+++.+
T Consensus 173 ~-~l~lE~~~~~~~~~~t~~~~~~l~~~v 200 (316)
T 3qxb_A 173 S-MLYVEPVPLATEFPSSAADAARLMADL 200 (316)
T ss_dssp C-EEEECCCSCTTBSSCSHHHHHHHHHHH
T ss_pred e-EEEEEecCCccccCCCHHHHHHHHHHH
Confidence 7 345544 23456666777766
No 316
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=65.80 E-value=21 Score=30.28 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=47.8
Q ss_pred HHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHH
Q 025927 77 KAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHR 156 (246)
Q Consensus 77 ~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~ 156 (246)
+.+...|++.+|.+.- .+.++.++.+++. +++ |+..+-|-...++.+.+.|+|.|+ +++|..
T Consensus 181 ~~~~~~~~~~i~~~~~--------~~~~~~v~~~~~~-G~~--v~~WTvn~~~~~~~l~~~GVdgIi-------TD~P~~ 242 (252)
T 3qvq_A 181 ERLEHLDCAGLHIHQS--------FFDVQQVSDIKAA-GYK--VLAFTINDESLALKLYNQGLDAVF-------SDYPQK 242 (252)
T ss_dssp HHHHHHTCSEEEEEGG--------GCCHHHHHHHHHT-TCE--EEEECCCCHHHHHHHHHTTCCEEE-------ESSHHH
T ss_pred HHHHHcCCeEEecchh--------hCCHHHHHHHHHC-CCE--EEEEcCCCHHHHHHHHHcCCCEEE-------eCCHHH
Confidence 3445668999998752 3457889988764 554 555555555557788999999888 356777
Q ss_pred HHHHHHH
Q 025927 157 TLNQIKD 163 (246)
Q Consensus 157 ~i~~Ik~ 163 (246)
+.+.+++
T Consensus 243 ~~~~l~~ 249 (252)
T 3qvq_A 243 IQSAIDS 249 (252)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776664
No 317
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=65.78 E-value=37 Score=28.39 Aligned_cols=106 Identities=17% Similarity=0.159 Sum_probs=64.3
Q ss_pred CcccchHHHHhcCCCEEEEccCCc---ccccHHHHHHHHHHcCCcEEEEEcC------CCC--------hHHHHHhhhh-
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQS---STIHLHRTLNQIKDLGAKAGVVLNP------ATS--------LSAIECVLDV- 187 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~~---~~~~~~~~i~~Ik~~G~k~GlAlnP------~Tp--------ve~l~~~l~~- 187 (246)
+.+..++...++|.+.|-+..+.. ....+.++.+.+++.|+++.....| ..+ ++.++..++.
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 97 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRL 97 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 456778888999999998885421 2345678888899999998764433 111 2334444442
Q ss_pred ----cceEEEEeecCCCC----CCc----ccHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 025927 188 ----VDLVLIMSVNPGFG----GQS----FIESQVKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 188 ----vD~VLvMsV~PGfg----GQ~----F~~~~l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
++.|.+ .+.||++ +.. ......+.++++-++..+.|..+-+|--
T Consensus 98 ~~lG~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 153 (294)
T 3vni_A 98 YKLDVHLIGG-ALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVL 153 (294)
T ss_dssp HHHTCCEEEE-STTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhCCCeeec-cccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 344432 2345553 111 2345566667777777777876667654
No 318
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=65.69 E-value=52 Score=27.86 Aligned_cols=113 Identities=14% Similarity=0.046 Sum_probs=68.5
Q ss_pred HHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccC---Cc
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE---QS 149 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E---~~ 149 (246)
.++++.+.++|+|.+.+|...+. +-..-.++++.+++. ++++-+ -+.+ ....+...++|+|+|.+... ..
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~---~p~~l~~~i~~~~~~-g~~v~~--~v~t-~eea~~a~~~Gad~Ig~~~~g~t~~ 163 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQ---RPVAVEALLARIHHH-HLLTMA--DCSS-VDDGLACQRLGADIIGTTMSGYTTP 163 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSC---CSSCHHHHHHHHHHT-TCEEEE--ECCS-HHHHHHHHHTTCSEEECTTTTSSSS
T ss_pred HHHHHHHHHcCCCEEEECccccC---CHHHHHHHHHHHHHC-CCEEEE--eCCC-HHHHHHHHhCCCCEEEEcCccCCCC
Confidence 36788888999999999886431 113345677777764 333211 2223 34566778899999965322 10
Q ss_pred ---ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEEE
Q 025927 150 ---STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIM 194 (246)
Q Consensus 150 ---~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvM 194 (246)
...+ ..++..+++.+ .+=+|-.-=...+.+..++.. +|-|+|=
T Consensus 164 ~~~~~~~-~~~i~~l~~~~-ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 164 DTPEEPD-LPLVKALHDAG-CRVIAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp SCCSSCC-HHHHHHHHHTT-CCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCC-HHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 1123 35677777763 233333322467888888775 8988884
No 319
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=65.66 E-value=16 Score=31.98 Aligned_cols=85 Identities=14% Similarity=0.090 Sum_probs=58.3
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc---CcccchHHHHhcCCCEEEEc
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV---EPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~---~P~~~i~~~~~agad~It~H 145 (246)
...+-+..+.++++|+|.+ |++.+ =.++.++.+.+..++|+.+- |.. .|..-+++|.+.|+.+|++.
T Consensus 167 ~~~ai~ra~a~~eAGAd~i--------~~e~~-~~~~~~~~i~~~~~~P~n~~-~~~~~~~p~~~~~eL~~lGv~~v~~~ 236 (255)
T 2qiw_A 167 MVEAIKRIKLMEQAGARSV--------YPVGL-STAEQVERLVDAVSVPVNIT-AHPVDGHGAGDLATLAGLGVRRVTFG 236 (255)
T ss_dssp HHHHHHHHHHHHHHTCSEE--------EECCC-CSHHHHHHHHTTCSSCBEEE-CBTTTBBTTBCHHHHHHTTCCEEECT
T ss_pred HHHHHHHHHHHHHcCCcEE--------EEcCC-CCHHHHHHHHHhCCCCEEEE-ecCCCCCCCCCHHHHHHcCCCEEEEH
Confidence 4455567778889999876 54443 12577888877667888532 221 24456899999999999998
Q ss_pred cCCcccccHHHHHHHHHHcC
Q 025927 146 CEQSSTIHLHRTLNQIKDLG 165 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G 165 (246)
.-+ ...+.+.++.|++.|
T Consensus 237 ~~a--~~a~~~~~~~i~~~g 254 (255)
T 2qiw_A 237 PLW--QKWLAATSAQQLKGW 254 (255)
T ss_dssp THH--HHHHHHHHHHHHGGG
T ss_pred HHH--HHHHHHHHHHHHhcC
Confidence 762 345667777777665
No 320
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=65.65 E-value=15 Score=33.08 Aligned_cols=76 Identities=12% Similarity=0.167 Sum_probs=45.7
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCC--------HHHHhhcccCC--CCCeeEEEeccC----------
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG--------PLVVDALRPVT--DLPLDVHLMIVE---------- 126 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg--------p~~I~~ir~~t--~~plDvHLMV~~---------- 126 (246)
.+..+..+.++.++++|+.-+| +-|+.+.+.-+.- .++++.|+... +. |.-++-..
T Consensus 101 g~~~~v~~~v~~l~~aGaagv~--iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~--~~~I~ARtda~~~~g~~~ 176 (305)
T 3ih1_A 101 GGVLNVARTAVEMVEAKVAAVQ--IEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAP--SLYIVARTDARGVEGLDE 176 (305)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEE--EECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCT--TSEEEEEECCHHHHCHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEE--ECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCC--CeEEEEeeccccccCHHH
Confidence 4667888999999999999999 5688775433221 13444443321 22 22222211
Q ss_pred cccchHHHHhcCCCEEEEcc
Q 025927 127 PEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~ 146 (246)
-.+-...|.++|||.|.+|.
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~ 196 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEA 196 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETT
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 11223457788999999864
No 321
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=65.60 E-value=15 Score=30.36 Aligned_cols=112 Identities=17% Similarity=0.140 Sum_probs=65.8
Q ss_pred CeeEEEecc----CcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEE-EEE--cCCCC--------hHHH
Q 025927 117 PLDVHLMIV----EPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAG-VVL--NPATS--------LSAI 181 (246)
Q Consensus 117 plDvHLMV~----~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~G-lAl--nP~Tp--------ve~l 181 (246)
.+-+|+.+- ..+..++...++|.+.|-+..+.....++.++.+.+++.|+++. +.. +...+ ++.+
T Consensus 6 ~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~ 85 (275)
T 3qc0_A 6 GLSINLATIREQCGFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDN 85 (275)
T ss_dssp TEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHH
T ss_pred cceeeeeeccCCCCHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHH
Confidence 344454444 34566778888999998886642112457778888899999863 332 22222 2445
Q ss_pred HHhhhh-----cceEEEEeecCCCC---CC---cccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 182 ECVLDV-----VDLVLIMSVNPGFG---GQ---SFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 182 ~~~l~~-----vD~VLvMsV~PGfg---GQ---~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
+..++. ++.|.+. ||.. +. .-.....+.++++-++..+.|..+-+|-
T Consensus 86 ~~~i~~a~~lG~~~v~~~---~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 143 (275)
T 3qc0_A 86 RRAVDEAAELGADCLVLV---AGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP 143 (275)
T ss_dssp HHHHHHHHHTTCSCEEEE---CBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHhCCCEEEEe---eCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE
Confidence 555543 5556655 3321 11 1234456667777777777887766763
No 322
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=65.32 E-value=69 Score=27.85 Aligned_cols=126 Identities=16% Similarity=0.168 Sum_probs=77.6
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=| ...++..+.-+++ ++..+++ |---|.
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttG---E~~~Ls~~Er~~v--------------------~~~~~~~~~gr~pvi 73 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTTG---ESPTLSHEEHKKV--------------------IEKVVDVVNGRVQVI 73 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTTT---TGGGSCHHHHHHH--------------------HHHHHHHHTTSSEEE
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECcccc---ChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 57899999999999999998764433333 3345555444333 2222221 222355
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|.=+++==.|+..|..+.++++.++.
T Consensus 74 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 74 AGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp EECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 565433345556667777788998888888863 223333 33444555344444588889999999988775
No 323
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=65.30 E-value=81 Score=29.67 Aligned_cols=112 Identities=20% Similarity=0.328 Sum_probs=70.6
Q ss_pred CCCeeEEEeccCccc-------chHHHHhcCCCEEEEccCCcccccHHHHHHHHH----HcCCcEEEEEcCCCCh----H
Q 025927 115 DLPLDVHLMIVEPEQ-------RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIK----DLGAKAGVVLNPATSL----S 179 (246)
Q Consensus 115 ~~plDvHLMV~~P~~-------~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik----~~G~k~GlAlnP~Tpv----e 179 (246)
+-|+-|.=|+..+.. .|..|.++|+++|-+-+-. .+-.+.+..|| +.|+.+=|+-.-...- .
T Consensus 21 ~~PI~VQSMtnT~T~Dv~aTv~QI~~L~~aG~eiVRvaVp~---~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~ 97 (406)
T 4g9p_A 21 AHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVND---EEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLR 97 (406)
T ss_dssp TSCCEEEEECCSCTTCHHHHHHHHHHHHHHTCSEEEEECCS---HHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHH
T ss_pred CCceeeeecCCCCcccHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHH
Confidence 468999999987764 4567788999988776542 22234455554 4577766665555443 2
Q ss_pred HHHHhhhhcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCC
Q 025927 180 AIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG 234 (246)
Q Consensus 180 ~l~~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGG 234 (246)
.++....-+|. .-+|||-=|.. ...-+|++++-+...+++....|.|-.|
T Consensus 98 a~~~~a~~~dk---iRINPGNig~~--~k~~e~~~~vv~~ak~~~~pIRIGVN~G 147 (406)
T 4g9p_A 98 KYPKMAEALDK---FRINPGTLGRG--RHKDEHFAEMIRIAMDLGKPVRIGANWG 147 (406)
T ss_dssp HCHHHHHHCSE---EEECTTSSCST--HHHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHhHHhh---cccCccccCcc--ccHHHHHHHHHHHHHHccCCceeccccc
Confidence 22333344555 47899965532 1223556666666677788889999777
No 324
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=65.29 E-value=42 Score=36.69 Aligned_cols=100 Identities=18% Similarity=0.300 Sum_probs=59.2
Q ss_pred cCCCEEEEcc--CCcccccHHHHHHHHHHc--CCcEEEEEcCCCChHHHHHhhh--hcceEEEEeecCCCCCCcccH---
Q 025927 137 AGADIVSVHC--EQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIE--- 207 (246)
Q Consensus 137 agad~It~H~--E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP~Tpve~l~~~l~--~vD~VLvMsV~PGfgGQ~F~~--- 207 (246)
.|.+.++... +-.+.+++..++..+|+. ++.+++-+-+...+.....-+. -+|.|.|=.-+.|- |-.+.+
T Consensus 996 ~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGT-gasp~~~~~ 1074 (1520)
T 1ofd_A 996 PGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGT-GASPLSSIK 1074 (1520)
T ss_dssp TTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCC-SSEEHHHHH
T ss_pred CCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCcc-CCCcchhhc
Confidence 4666766422 111123456788888887 6778888887655544433332 49999876555442 223322
Q ss_pred ----HHHHHHHHHHHHHHhcCC--CCeEEEeCCCCh
Q 025927 208 ----SQVKKISDLRRMCLEKGV--NPWIEVDGGVGP 237 (246)
Q Consensus 208 ----~~l~KI~~lr~l~~~~~~--~~~I~VDGGI~~ 237 (246)
.+..=+.++++.+.++|+ ++.|.+||||..
T Consensus 1075 ~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrt 1110 (1520)
T 1ofd_A 1075 HAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKT 1110 (1520)
T ss_dssp HBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCS
T ss_pred CCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCC
Confidence 134556666666655554 467999999974
No 325
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=65.28 E-value=6.7 Score=35.13 Aligned_cols=111 Identities=17% Similarity=0.244 Sum_probs=57.6
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCC-C-------H--HHHhhcccCC--CCCeeEEEecc----------
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITI-G-------P--LVVDALRPVT--DLPLDVHLMIV---------- 125 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tf-g-------p--~~I~~ir~~t--~~plDvHLMV~---------- 125 (246)
+..+..+.+++++++|+.-+|+. |+.+.|-.+. | | ++++.|+... ...-+.-++-.
T Consensus 92 ~~~~v~~~v~~l~~aGaagv~iE--D~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 169 (295)
T 1s2w_A 92 NFNNARRLVRKLEDRGVAGACLE--DKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGL 169 (295)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEC--CCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccH
Confidence 45678889999999999999986 8776543221 1 1 3344332210 00011112211
Q ss_pred -CcccchHHHHhcCCCEEEEcc-CCcccccHHHHHHHHHHcCCcEEEEEcCC----CChHHHHHh
Q 025927 126 -EPEQRVPDFIKAGADIVSVHC-EQSSTIHLHRTLNQIKDLGAKAGVVLNPA----TSLSAIECV 184 (246)
Q Consensus 126 -~P~~~i~~~~~agad~It~H~-E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~----Tpve~l~~~ 184 (246)
+-.+-...|.++|||.|.+|. -. +.+...++.+.+ ..++=+.+||. +++++|..+
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~~~~-~~~~~~~i~~~~---~~~~P~i~~~~~~~~~~~~eL~~l 230 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHSKKA-DPSDIEAFMKAW---NNQGPVVIVPTKYYKTPTDHFRDM 230 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSS-SSHHHHHHHHHH---TTCSCEEECCSTTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC-CHHHHHHHHHHc---CCCCCEEEeCCCCCCCCHHHHHHc
Confidence 111223467889999999874 21 123344444443 32233455665 777777775
No 326
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=65.16 E-value=43 Score=27.97 Aligned_cols=114 Identities=15% Similarity=0.161 Sum_probs=66.8
Q ss_pred CCeeEEEecc-CcccchHHHHhcCCCEEEEccCCc---ccccHHHHHHHHHHcCCcEEEEEc------------------
Q 025927 116 LPLDVHLMIV-EPEQRVPDFIKAGADIVSVHCEQS---STIHLHRTLNQIKDLGAKAGVVLN------------------ 173 (246)
Q Consensus 116 ~plDvHLMV~-~P~~~i~~~~~agad~It~H~E~~---~~~~~~~~i~~Ik~~G~k~GlAln------------------ 173 (246)
+++-+|--+. ..+..++...++|.+.|-+..... +...+.++.+.+++.|+++...-.
T Consensus 11 ~~lg~~t~~~~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~ 90 (290)
T 3tva_A 11 WPIGVFTSVDAGLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVG 90 (290)
T ss_dssp SCEEEEEESSSSSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSS
T ss_pred eeEEEEecCCCCHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccC
Confidence 4455555333 445788888999999998886421 123467788889999999865421
Q ss_pred ---CCC---ChHHHHHhhhh-----cceEEEEeecCCCCC---CcccHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 025927 174 ---PAT---SLSAIECVLDV-----VDLVLIMSVNPGFGG---QSFIESQVKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 174 ---P~T---pve~l~~~l~~-----vD~VLvMsV~PGfgG---Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
|.. .++.++..++. ++.|.+ .||+.. ..-.....+.++++-++.++.|..+-+|--
T Consensus 91 ~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~---~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 91 LVPLETRASRVAEMKEISDFASWVGCPAIGL---HIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp SCSTTTHHHHHHHHHHHHHHHHHHTCSEEEE---CCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE---cCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 110 12444444443 455554 355432 223344566677777777777765555543
No 327
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=65.13 E-value=25 Score=29.62 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHcCCCEEEeeec
Q 025927 71 KLGEQVKAVELAGCDWIHVDVM 92 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIM 92 (246)
.+.+.++.+.+.|.+.+-+..-
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~ 63 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVR 63 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECS
T ss_pred CHHHHHHHHHHhCCCEEEEcCC
Confidence 5667777777778887766543
No 328
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=64.89 E-value=7.6 Score=35.62 Aligned_cols=122 Identities=14% Similarity=0.089 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCc----cc-CC---------------CCCCHHHHhhcccCCCC-CeeEEEeccC---
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGR----FV-PN---------------ITIGPLVVDALRPVTDL-PLDVHLMIVE--- 126 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~----FV-pN---------------~tfgp~~I~~ir~~t~~-plDvHLMV~~--- 126 (246)
.+.+..+++.++|.|.+.+..--|. |. |+ .-|--++++++|+..+- |+-+-|=..+
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 5556677788899999998876552 22 32 12346778888885432 6665553221
Q ss_pred ------c----ccchHHHHhcCCCEEEEccCCcc--ccc--HHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--cce
Q 025927 127 ------P----EQRVPDFIKAGADIVSVHCEQSS--TIH--LHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDL 190 (246)
Q Consensus 127 ------P----~~~i~~~~~agad~It~H~E~~~--~~~--~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~--vD~ 190 (246)
+ ..+++.+.++|+|+|++|.-... ... ....+..+|+.= +.=|+.+-+...+..+++|.. +|+
T Consensus 248 g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~-~iPvi~~G~i~~~~a~~~l~~g~aD~ 326 (376)
T 1icp_A 248 EAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY-KGTFIVAGGYDREDGNRALIEDRADL 326 (376)
T ss_dssp TCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC-CSCEEEESSCCHHHHHHHHHTTSCSE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc-CCCEEEeCCCCHHHHHHHHHCCCCcE
Confidence 1 24566777899999999853110 000 012345566532 222445555567888888874 898
Q ss_pred EEE
Q 025927 191 VLI 193 (246)
Q Consensus 191 VLv 193 (246)
|.+
T Consensus 327 V~~ 329 (376)
T 1icp_A 327 VAY 329 (376)
T ss_dssp EEE
T ss_pred Eee
Confidence 766
No 329
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=64.86 E-value=19 Score=32.75 Aligned_cols=145 Identities=11% Similarity=0.131 Sum_probs=83.8
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC--CCCeeEEEeccCcccchHHHHhcCCCEEEEc-cCCcc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT--DLPLDVHLMIVEPEQRVPDFIKAGADIVSVH-CEQSS 150 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t--~~plDvHLMV~~P~~~i~~~~~agad~It~H-~E~~~ 150 (246)
+.++.+...|+||+=+|.-|+.+-.. +. -..+.++.... +.+.-|=+---+| ..|..+.++|++.|.+. +|+
T Consensus 54 ~~~e~a~~~GaD~vilDlEha~~~~e-~~-~~~l~a~~~~~~~~~~~~VRv~~~~~-~di~~~LdaGa~gImlP~V~s-- 128 (339)
T 1izc_A 54 FVTKVLAATKPDFVWIDVEHGMFNRL-EL-HDAIHAAQHHSEGRSLVIVRVPKHDE-VSLSTALDAGAAGIVIPHVET-- 128 (339)
T ss_dssp HHHHHHHHTCCSEEEEETTTSCCCHH-HH-HHHHHHHHHHTTTCSEEEEECCTTCH-HHHHHHHHHTCSEEEETTCCC--
T ss_pred HHHHHHHhCCCCEEEEECCCCCCcHH-HH-HHHHHHhhhcCCCCCeEEEEeCCCCH-HHHHHHHhCCCCEEEeCCCCC--
Confidence 45667778899999999999876221 10 11122222110 0222222222234 46778888999977775 453
Q ss_pred cccHHHHHHHHHH--cC--------------------------------CcEEEEEcCCCChHHHHHhhh--hcceEEE-
Q 025927 151 TIHLHRTLNQIKD--LG--------------------------------AKAGVVLNPATSLSAIECVLD--VVDLVLI- 193 (246)
Q Consensus 151 ~~~~~~~i~~Ik~--~G--------------------------------~k~GlAlnP~Tpve~l~~~l~--~vD~VLv- 193 (246)
.+++.++.+.++. .| +++++-|--..-++.++.++. .+|.|.+
T Consensus 129 aee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG 208 (339)
T 1izc_A 129 VEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAAMPEIHGLMFG 208 (339)
T ss_dssp HHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHTCTTCCCEEEC
T ss_pred HHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhcCCCCCEEEEC
Confidence 4566666666653 11 234444432233467777774 5898887
Q ss_pred ---Eeec--------CCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 025927 194 ---MSVN--------PGFGGQSFIESQVKKISDLRRMCLEKGVN 226 (246)
Q Consensus 194 ---MsV~--------PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~ 226 (246)
++.. =|..+ .|+++.-++++..-..++|..
T Consensus 209 ~~DLs~~~~~~~~~~lG~~~---~p~v~~a~~~iv~aaraaGk~ 249 (339)
T 1izc_A 209 PGDYMIDAGLDLNGALSGVP---HPTFVEAMTKFSTAAQRNGVP 249 (339)
T ss_dssp HHHHHHHTTCCTTCCTTSCC---CHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhhhhcccchhhCCCC---CHHHHHHHHHHHHHHHHhCCc
Confidence 4444 34433 677777777777777777764
No 330
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=64.80 E-value=44 Score=30.45 Aligned_cols=161 Identities=10% Similarity=-0.006 Sum_probs=95.7
Q ss_pred CcEEeeeecccChhhHHHHHHHHH---HcCCCEEEeeeccCcccCCC----CC--CHH----HHhhcccCCCCCeeEEEe
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVE---LAGCDWIHVDVMDGRFVPNI----TI--GPL----VVDALRPVTDLPLDVHLM 123 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~---~~g~d~lHiDIMDG~FVpN~----tf--gp~----~I~~ir~~t~~plDvHLM 123 (246)
+.-+..||+..+...+.+-+++++ +.|+|+|=+.+- +||. .| .|+ +++++|+.+++|+-|=|-
T Consensus 126 ~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNis----CPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~ 201 (354)
T 4ef8_A 126 KKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLS----CPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMP 201 (354)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECS----SCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCC----CCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEec
Confidence 355778899888888888888888 578999887763 4553 23 344 455667777888877765
Q ss_pred ccC-cc---cchHHHHhcC-CCEEEE----------ccCCcc-------------c----ccHHHHHHHHHHcCCcEEEE
Q 025927 124 IVE-PE---QRVPDFIKAG-ADIVSV----------HCEQSS-------------T----IHLHRTLNQIKDLGAKAGVV 171 (246)
Q Consensus 124 V~~-P~---~~i~~~~~ag-ad~It~----------H~E~~~-------------~----~~~~~~i~~Ik~~G~k~GlA 171 (246)
..- .. +.++.+.++| +|.|+. |.+.-. . .--.+.+.++++..-++=|.
T Consensus 202 p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII 281 (354)
T 4ef8_A 202 PYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIF 281 (354)
T ss_dssp CCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEE
Confidence 431 11 1233344677 998874 322100 0 01257788888874345555
Q ss_pred EcCC-CChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHH-HHHHHHHhcCCC
Q 025927 172 LNPA-TSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKIS-DLRRMCLEKGVN 226 (246)
Q Consensus 172 lnP~-Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~-~lr~l~~~~~~~ 226 (246)
.+-+ +..++..+++. -+|.|.+=+--- +.| |..+++|+ .+++++.+.|+.
T Consensus 282 ~~GGI~s~~da~~~l~aGAd~V~vgra~l-~~G----P~~~~~i~~~l~~~m~~~G~~ 334 (354)
T 4ef8_A 282 GCGGVYTGEDAFLHVLAGASMVQVGTALQ-EEG----PSIFERLTSELLGVMAKKRYQ 334 (354)
T ss_dssp EESCCCSHHHHHHHHHHTEEEEEECHHHH-HHC----TTHHHHHHHHHHHHHHHHTCC
T ss_pred EECCcCCHHHHHHHHHcCCCEEEEhHHHH-HhC----HHHHHHHHHHHHHHHHHcCCC
Confidence 5555 45566666654 488887743211 011 33444443 456667776654
No 331
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=64.77 E-value=30 Score=28.57 Aligned_cols=33 Identities=18% Similarity=0.089 Sum_probs=14.9
Q ss_pred HHHHHHHHHHcCCcE-EEEEcCCCChHHHHHhhh
Q 025927 154 LHRTLNQIKDLGAKA-GVVLNPATSLSAIECVLD 186 (246)
Q Consensus 154 ~~~~i~~Ik~~G~k~-GlAlnP~Tpve~l~~~l~ 186 (246)
+.++.+.+++.|+++ ++....+...+.++..++
T Consensus 65 ~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~ 98 (262)
T 3p6l_A 65 QKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFK 98 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHH
Confidence 445555555566554 222222334444444443
No 332
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=64.67 E-value=50 Score=27.98 Aligned_cols=113 Identities=13% Similarity=0.054 Sum_probs=67.4
Q ss_pred HHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccC---Cc
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE---QS 149 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E---~~ 149 (246)
.++++.+.++|+|.+.+|...+. -| ..-.++++.+++. ++++-+ -+.+ ....+...++|+|+|.+... ..
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~-~p--~~l~~~i~~~~~~-g~~v~~--~v~t-~eea~~a~~~Gad~Ig~~~~g~t~~ 163 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRS-RP--VDIDSLLTRIRLH-GLLAMA--DCST-VNEGISCHQKGIEFIGTTLSGYTGP 163 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSC-CS--SCHHHHHHHHHHT-TCEEEE--ECSS-HHHHHHHHHTTCSEEECTTTTSSSS
T ss_pred HHHHHHHHHcCCCEEEECccccC-Ch--HHHHHHHHHHHHC-CCEEEE--ecCC-HHHHHHHHhCCCCEEEecCccCCCC
Confidence 36788888999999999886531 12 2335677877764 333211 1223 34566778899999964322 10
Q ss_pred ---ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEEE
Q 025927 150 ---STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIM 194 (246)
Q Consensus 150 ---~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvM 194 (246)
...++ .+++.+++.++ +=+|-.-=...+.+..++.. +|-|+|=
T Consensus 164 ~~~~~~~~-~li~~l~~~~i-pvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 164 ITPVEPDL-AMVTQLSHAGC-RVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp CCCSSCCH-HHHHHHHTTTC-CEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CcCCCCCH-HHHHHHHHcCC-CEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 11233 56777776632 23333322457888887765 8888873
No 333
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=64.41 E-value=70 Score=27.94 Aligned_cols=126 Identities=14% Similarity=0.183 Sum_probs=66.9
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCC--CEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGA--DIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~aga--d~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=| ...++..+.-+++ ++..+++-. --|.
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttG---E~~~Ls~~Er~~v--------------------~~~~~~~~~gr~pvi 76 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTG---EGCSVGSRERQAI--------------------LSSFIAAGIAPSRIV 76 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTT---TGGGSCHHHHHHH--------------------HHHHHHTTCCGGGEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc---ChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 58999999999999999998764433333 3355555444333 112222111 1133
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC----ChHHHH----Hhhhhc---ceEEEEeecCCCCCCcccHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT----SLSAIE----CVLDVV---DLVLIMSVNPGFGGQSFIESQVKK 212 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T----pve~l~----~~l~~v---D~VLvMsV~PGfgGQ~F~~~~l~K 212 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+ |.=+++==.|+..|..+.++++.+
T Consensus 77 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~ 156 (294)
T 3b4u_A 77 TGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGR 156 (294)
T ss_dssp EEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHH
T ss_pred EeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHH
Confidence 343322233444555555666777666666642 112222 223334 442333334777777777777766
Q ss_pred HH
Q 025927 213 IS 214 (246)
Q Consensus 213 I~ 214 (246)
+.
T Consensus 157 La 158 (294)
T 3b4u_A 157 LK 158 (294)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 334
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=64.40 E-value=29 Score=30.56 Aligned_cols=126 Identities=14% Similarity=0.070 Sum_probs=75.2
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++ ++..+++ |---|.
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gi~v~---GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~grvpvi 73 (297)
T 2rfg_A 17 QVDEKALAGLVDWQIKHGAHGLVPV---GTTGESPTLTEEEHKRV--------------------VALVAEQAQGRVPVI 73 (297)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEECS---SGGGTGGGSCHHHHHHH--------------------HHHHHHHHTTSSCBE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEC---ccccchhhCCHHHHHHH--------------------HHHHHHHhCCCCeEE
Confidence 5799999999999999998876432 33223345555544333 1222221 211244
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|.=+++==.|+..|..+.++++.++.
T Consensus 74 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (297)
T 2rfg_A 74 AGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLA 151 (297)
T ss_dssp EECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 454432344555666777788888888887763 223333 33444555344445688888889888887775
No 335
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=64.25 E-value=6 Score=36.43 Aligned_cols=74 Identities=9% Similarity=0.126 Sum_probs=50.3
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCC--CCCC---HHHHhhcccCCCCCeeEEEec---cCcccchHHHHhcCC
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN--ITIG---PLVVDALRPVTDLPLDVHLMI---VEPEQRVPDFIKAGA 139 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN--~tfg---p~~I~~ir~~t~~plDvHLMV---~~P~~~i~~~~~aga 139 (246)
+.....+.++.+ ++|+..||+..+++.+-|. -.|. .+.|+++++.+++|+-+=. | ..| .....+.++|+
T Consensus 136 ~~~~~~~av~~~-~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~s~-~~A~~l~~aGa 212 (368)
T 3vkj_A 136 GLKEFQDAIQMI-EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE-SGNGISM-ETAKLLYSYGI 212 (368)
T ss_dssp CHHHHHHHHHHT-TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCCCH-HHHHHHHHTTC
T ss_pred CHHHHHHHHHHh-cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe-CCCCCCH-HHHHHHHhCCC
Confidence 334444445555 6788889998887766553 3443 6688999888888876542 2 234 34678889999
Q ss_pred CEEEE
Q 025927 140 DIVSV 144 (246)
Q Consensus 140 d~It~ 144 (246)
|.|.+
T Consensus 213 d~I~V 217 (368)
T 3vkj_A 213 KNFDT 217 (368)
T ss_dssp CEEEC
T ss_pred CEEEE
Confidence 99998
No 336
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=64.09 E-value=14 Score=31.64 Aligned_cols=39 Identities=18% Similarity=0.263 Sum_probs=31.2
Q ss_pred HHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEEEee
Q 025927 156 RTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSV 196 (246)
Q Consensus 156 ~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV 196 (246)
..++.++++|..+ +.+.+.++.+ +..+++.+|-|++..-
T Consensus 32 ~~~~~l~~aG~~p-v~lp~~~~~~-~~~~l~~~DGlil~GG 70 (254)
T 3fij_A 32 RYVDAIQKVGGFP-IALPIDDPST-AVQAISLVDGLLLTGG 70 (254)
T ss_dssp HHHHHHHHHTCEE-EEECCCCGGG-HHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCEE-EEEeCCCchH-HHHHHhhCCEEEECCC
Confidence 5677888899877 4577777777 8889999999999764
No 337
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=64.09 E-value=74 Score=27.74 Aligned_cols=126 Identities=18% Similarity=0.152 Sum_probs=74.4
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-.++ ++..++. |---|.
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~---GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~grvpvi 73 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDNGTDAILVC---GTTGESPTLTFEEHEKV--------------------IEFAVKRAAGRIKVI 73 (294)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEEES---STTTTGGGSCHHHHHHH--------------------HHHHHHHHTTSSEEE
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEEC---ccccChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5789999999999999999876443 33223345555443333 2222221 222355
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|.=+++==.|+..|..+.++++.++.
T Consensus 74 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 74 AGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 555433344555666667778888888887753 223333 23344554334444588888888888887775
No 338
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=63.92 E-value=5 Score=36.89 Aligned_cols=73 Identities=14% Similarity=-0.048 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCC--CCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC-CCEEEEccC
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNIT--IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG-ADIVSVHCE 147 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~t--fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag-ad~It~H~E 147 (246)
...+-++.|+++|+|+||+-- |.+.+.-. -.++.++.+|+..++|+-+==-+ +|+... .+.+.| +|.|.+=--
T Consensus 257 ~~~~la~~le~~Gvd~i~v~~--~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i-~~~~a~-~~l~~g~aD~V~~gR~ 332 (376)
T 1icp_A 257 LGLYMVESLNKYDLAYCHVVE--PRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY-DREDGN-RALIEDRADLVAYGRL 332 (376)
T ss_dssp HHHHHHHHHGGGCCSEEEEEC--CSCCC------CCCCSHHHHHHCCSCEEEESSC-CHHHHH-HHHHTTSCSEEEESHH
T ss_pred HHHHHHHHHHHcCCCEEEEcC--CcccCCCCccccHHHHHHHHHHcCCCEEEeCCC-CHHHHH-HHHHCCCCcEEeecHH
Confidence 345667889999999999854 32221111 12345677777777776443334 566554 444555 999998533
No 339
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=63.80 E-value=7.2 Score=35.87 Aligned_cols=87 Identities=9% Similarity=-0.030 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCC-CCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC-CCEEEEccC
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT-IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG-ADIVSVHCE 147 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~t-fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag-ad~It~H~E 147 (246)
....+-++.|+++|+|+||+-- |.+.+... ...+.++.+|+..++|+-+==-+ +|+... ++.+.| ||.|.+=--
T Consensus 255 ~~~~~la~~le~~Gvd~i~v~~--~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~-~~l~~g~aD~V~igR~ 330 (377)
T 2r14_A 255 AMAFYLAGELDRRGLAYLHFNE--PDWIGGDITYPEGFREQMRQRFKGGLIYCGNY-DAGRAQ-ARLDDNTADAVAFGRP 330 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC--CC------CCCTTHHHHHHHHCCSEEEEESSC-CHHHHH-HHHHTTSCSEEEESHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeC--CcccCCCCcchHHHHHHHHHHCCCCEEEECCC-CHHHHH-HHHHCCCceEEeecHH
Confidence 3445567889999999999854 32211111 13467888888777775443233 455544 555555 999998533
Q ss_pred CcccccHHHHHHHHHH
Q 025927 148 QSSTIHLHRTLNQIKD 163 (246)
Q Consensus 148 ~~~~~~~~~~i~~Ik~ 163 (246)
..+..+ +.+++++
T Consensus 331 ~l~~P~---l~~k~~~ 343 (377)
T 2r14_A 331 FIANPD---LPERFRL 343 (377)
T ss_dssp HHHCTT---HHHHHHH
T ss_pred HHhCch---HHHHHHc
Confidence 222233 4555553
No 340
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=63.42 E-value=78 Score=27.80 Aligned_cols=126 Identities=17% Similarity=0.157 Sum_probs=76.0
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++ ++..++. |---|.
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~---GtTGE~~~Ls~eEr~~v--------------------~~~~~~~~~grvpVi 84 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVG---GSTGEAFVQSLSEREQV--------------------LEIVAEEAKGKIKLI 84 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEES---STTTTGGGSCHHHHHHH--------------------HHHHHHHHTTTSEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEC---eeccChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5889999999999999999876443 33323345555544333 2222221 222455
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----Hhhhhcc-eEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVD-LVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD-~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.++ +=+++==.|+..|..+.++++.++.
T Consensus 85 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La 163 (303)
T 2wkj_A 85 AHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLV 163 (303)
T ss_dssp EECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 565433344555666777788888888888763 223333 2334455 4233334588888888888887764
No 341
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=63.34 E-value=33 Score=29.56 Aligned_cols=115 Identities=10% Similarity=-0.002 Sum_probs=64.6
Q ss_pred CCCeeEEEeccC------cccchHHHHhcCCCEEEEccC--------Cc-----ccccHHHHHHHHHHcCCcEEEEEcCC
Q 025927 115 DLPLDVHLMIVE------PEQRVPDFIKAGADIVSVHCE--------QS-----STIHLHRTLNQIKDLGAKAGVVLNPA 175 (246)
Q Consensus 115 ~~plDvHLMV~~------P~~~i~~~~~agad~It~H~E--------~~-----~~~~~~~~i~~Ik~~G~k~GlAlnP~ 175 (246)
..++=+.+..-+ ++..++...++|.+.|-+... .. +..++.++-+.+++.|+++-.. +..
T Consensus 20 ~~~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~-~~~ 98 (305)
T 3obe_A 20 GKKMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSS-HLT 98 (305)
T ss_dssp CCCCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEE-BCC
T ss_pred CCceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEe-ecc
Confidence 456666665544 446777888899998887643 00 0126778888899999997322 222
Q ss_pred CC------------hHHHHHhhhh-----cceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 176 TS------------LSAIECVLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 176 Tp------------ve~l~~~l~~-----vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
.+ ++.++..++. ++.|.+....++. ...-.....+.++++-++.++.|..+-+|-
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 170 (305)
T 3obe_A 99 PSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLPRIE-NEDDAKVVSEIFNRAGEITKKAGILWGYHN 170 (305)
T ss_dssp CSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCS-SHHHHHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 11 3345554443 5666653221111 111123345666666677777776555543
No 342
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=63.34 E-value=14 Score=35.83 Aligned_cols=122 Identities=18% Similarity=0.191 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCc----c-cCC---------------CCCCHHHHhhcccCC--CCCeeEEEeccC--
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGR----F-VPN---------------ITIGPLVVDALRPVT--DLPLDVHLMIVE-- 126 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~----F-VpN---------------~tfgp~~I~~ir~~t--~~plDvHLMV~~-- 126 (246)
.+.+..+++.++|.|.+-+..--|. | .|+ .-|-.++++++|+.. ++|+-+-|=..+
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 4556677778899998877655442 1 132 223467888888865 556555443321
Q ss_pred --------cccchHHHHhcCCCEEEEcc---CCcc--------cccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhh
Q 025927 127 --------PEQRVPDFIKAGADIVSVHC---EQSS--------TIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLD 186 (246)
Q Consensus 127 --------P~~~i~~~~~agad~It~H~---E~~~--------~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~ 186 (246)
...+.+.+.++|+|+|++|. |... .......++.+|+.= +.=|+.+-+ +..+..+++|.
T Consensus 222 ~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~~Ggi~~~~~a~~~l~ 300 (671)
T 1ps9_A 222 EDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV-SLPLVTTNRINDPQVADDILS 300 (671)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEEECSSCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc-CceEEEeCCCCCHHHHHHHHH
Confidence 22456677788999999973 3210 012235677777643 333444444 57888889887
Q ss_pred h--cceEEE
Q 025927 187 V--VDLVLI 193 (246)
Q Consensus 187 ~--vD~VLv 193 (246)
. +|+|.+
T Consensus 301 ~g~aD~V~~ 309 (671)
T 1ps9_A 301 RGDADMVSM 309 (671)
T ss_dssp TTSCSEEEE
T ss_pred cCCCCEEEe
Confidence 5 898765
No 343
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=63.29 E-value=26 Score=31.33 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=74.5
Q ss_pred Eeeeeccc--ChhhHHHHHHHHHHcCCCEEEe---eeccCcccCCCCCCHHHHhhcccCCCCCeeE------EEeccCcc
Q 025927 60 VSPSILSA--NFAKLGEQVKAVELAGCDWIHV---DVMDGRFVPNITIGPLVVDALRPVTDLPLDV------HLMIVEPE 128 (246)
Q Consensus 60 IsPSIl~a--D~~~l~~~i~~l~~~g~d~lHi---DIMDG~FVpN~tfgp~~I~~ir~~t~~plDv------HLMV~~P~ 128 (246)
..|=+-|. +...+.+.|..+.+.|++.+=. |.-.+.-. .+....+.|+.||+..++.+-+ |--..+++
T Consensus 85 ~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~-~~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a~~~~ 163 (304)
T 3fst_A 85 AAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGK-PEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQ 163 (304)
T ss_dssp EEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC-------CCCHHHHHHHHHHHCCCEEEEEECTTCCTTCSCHH
T ss_pred eeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCC-CCCCHHHHHHHHHHcCCCeEEEEeCCCcCCCCCCHH
Confidence 34444454 4557778899999999987762 43222111 2456778899998765542222 11111222
Q ss_pred cchHHH---HhcCCCEEEEccCCcccccHHHHHHHHHHcCCc--EEEEEcCCCChHHHHHh
Q 025927 129 QRVPDF---IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAK--AGVVLNPATSLSAIECV 184 (246)
Q Consensus 129 ~~i~~~---~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k--~GlAlnP~Tpve~l~~~ 184 (246)
.-++.| +++|||++.-++=- ..+...++++.+|+.|+. +=..|-|=|+...+..+
T Consensus 164 ~d~~~Lk~KvdAGAdf~iTQ~ff-D~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 164 ADLLNLKRKVDAGANRAITQFFF-DVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCS-CHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccC-CHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 223333 46899998877532 234577889999999865 33456677888777766
No 344
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=62.79 E-value=28 Score=29.91 Aligned_cols=114 Identities=12% Similarity=0.166 Sum_probs=69.7
Q ss_pred HHHHHHHHHcCCCE--EEeeeccCcccCCCCCCHHHHhhcccCC--------CCCeeEEEeccCcccchHHHHhcCCCEE
Q 025927 73 GEQVKAVELAGCDW--IHVDVMDGRFVPNITIGPLVVDALRPVT--------DLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (246)
Q Consensus 73 ~~~i~~l~~~g~d~--lHiDIMDG~FVpN~tfgp~~I~~ir~~t--------~~plDvHLMV~~P~~~i~~~~~agad~I 142 (246)
++.++.+.++|+|+ +|+.--| + -...++.+|+.+ +...=+=|-...|...++.+.+ ++|+|
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~~-~-------~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~-~~D~v 152 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQYH-D-------FALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLD-QIDVI 152 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCTT-S-------HHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTT-TCSEE
T ss_pred HHHHHHHHHcCCCEEEEecCCcc-c-------HHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhh-cCcee
Confidence 67899999999999 8866543 1 246788887751 3333333433566666666554 79999
Q ss_pred E---EccCCcccccH---HHHHHHHH----HcCCcEEEEEcCCCChHHHHHhhh---hcceEEEEe
Q 025927 143 S---VHCEQSSTIHL---HRTLNQIK----DLGAKAGVVLNPATSLSAIECVLD---VVDLVLIMS 195 (246)
Q Consensus 143 t---~H~E~~~~~~~---~~~i~~Ik----~~G~k~GlAlnP~Tpve~l~~~l~---~vD~VLvMs 195 (246)
. +|+-....... .+-++++| +.|...=+.+.-+-..+.+..+.+ -+|.+.+=|
T Consensus 153 lvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGS 218 (237)
T 3cu2_A 153 QLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGS 218 (237)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECG
T ss_pred eeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCCCcEEEEee
Confidence 4 47642111111 22223333 334445577788888899988877 488876643
No 345
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=62.77 E-value=31 Score=30.17 Aligned_cols=126 Identities=16% Similarity=0.108 Sum_probs=72.0
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=|.| .++..+.-+++ ++..+++ |---|.
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~---~~Ls~~Er~~v--------------------~~~~~~~~~gr~pvi 74 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGES---ATLNHDEHADV--------------------VMMTLDLADGRIPVI 74 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTG---GGSCHHHHHHH--------------------HHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccch---hhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5899999999999999999876443333333 45555443333 1222221 211244
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 75 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 75 AGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp EECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHH
T ss_pred EecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHH
Confidence 555432234444555555667777777777753 223333 23344554333444588888888888887764
No 346
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=62.59 E-value=21 Score=30.55 Aligned_cols=139 Identities=15% Similarity=0.116 Sum_probs=73.9
Q ss_pred EeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCC--CCCCHHHHhhccc---CCCCCee---EEE---ec----
Q 025927 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN--ITIGPLVVDALRP---VTDLPLD---VHL---MI---- 124 (246)
Q Consensus 60 IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN--~tfgp~~I~~ir~---~t~~plD---vHL---MV---- 124 (246)
|+-+..+.-...+.+.++.+.+.|.+.+-+-.- +.+++- ....+..++++++ ..++.+. +|+ .+
T Consensus 5 lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~ 83 (340)
T 2zds_A 5 FTLFTGQWADLPLEEVCRLARDFGYDGLELACW-GDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAI 83 (340)
T ss_dssp EEEESGGGTTSCHHHHHHHHHHHTCSEEEEESS-TTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSC
T ss_pred eEEeecccCCCCHHHHHHHHHHcCCCEEEeccc-cccCCccccccCHHHHHHHHHHHHHcCCeEEEeecccccccccccc
Confidence 444444433467888899999999999887653 222221 0012223333333 3466543 343 00
Q ss_pred --------------c--Ccc-----------cchHHHHhcCCCEEEEccCCcc----------------------cccHH
Q 025927 125 --------------V--EPE-----------QRVPDFIKAGADIVSVHCEQSS----------------------TIHLH 155 (246)
Q Consensus 125 --------------~--~P~-----------~~i~~~~~agad~It~H~E~~~----------------------~~~~~ 155 (246)
. +|+ +.++...+.|+++|.+|.-... .+.+.
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (340)
T 2zds_A 84 IDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWN 163 (340)
T ss_dssp CSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHH
Confidence 0 221 2244445579999999852100 01233
Q ss_pred HHHHHHHHcCCcEEEEEcCCC---ChHHHHHhhhhcc-e-EEEEeecCC
Q 025927 156 RTLNQIKDLGAKAGVVLNPAT---SLSAIECVLDVVD-L-VLIMSVNPG 199 (246)
Q Consensus 156 ~~i~~Ik~~G~k~GlAlnP~T---pve~l~~~l~~vD-~-VLvMsV~PG 199 (246)
++.+..++.|++.++=-.|.+ ..+.+..+++.+| - =+=+..++|
T Consensus 164 ~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~vg~~~D~~ 212 (340)
T 2zds_A 164 PILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPS 212 (340)
T ss_dssp HHHHHHHHHTCEEEEECCTTSSCCSHHHHHHHHHHTTTCTTEEEEECCH
T ss_pred HHHHHHHHcCCEEEEEcCCCcccCCHHHHHHHHHhcCCCCCeeEEEchh
Confidence 445556677888776555543 4566677777775 1 134455665
No 347
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=62.35 E-value=63 Score=28.28 Aligned_cols=126 Identities=16% Similarity=0.138 Sum_probs=67.9
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=|.| .++..+.-+++ ++..+++ |---|.
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~---~~Ls~~Er~~v--------------------~~~~~~~~~grvpvi 80 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGES---ATLSVEEHTAV--------------------IEAVVKHVAKRVPVI 80 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTG---GGSCHHHHHHH--------------------HHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCc---ccCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5789999999999999999877543333333 45555443333 1222221 212234
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.|.=+.++.+..+..++.++.|..+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 81 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 81 AGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred EeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 444332334444555566666776666666641 112222 22333444333444466667777777665553
No 348
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=62.19 E-value=53 Score=27.24 Aligned_cols=114 Identities=11% Similarity=0.121 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC---CCCeeEE---Eecc--------CcccchHHHHhcCC
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT---DLPLDVH---LMIV--------EPEQRVPDFIKAGA 139 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t---~~plDvH---LMV~--------~P~~~i~~~~~aga 139 (246)
++++++.+.|+|.+|+.-.. .+| |+.++.++++. -+-+|+| +.+. ++..+.+.+.++|+
T Consensus 86 ~~~~~~~~~Gad~V~lg~~~---l~~----p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 158 (241)
T 1qo2_A 86 DYAEKLRKLGYRRQIVSSKV---LED----PSFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGL 158 (241)
T ss_dssp HHHHHHHHTTCCEEEECHHH---HHC----TTHHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTC
T ss_pred HHHHHHHHCCCCEEEECchH---hhC----hHHHHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCC
Confidence 46667777899999875443 222 44555552221 1235554 1211 56667777888999
Q ss_pred CEEEEccCCc----ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-------cceEEEEe
Q 025927 140 DIVSVHCEQS----STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-------VDLVLIMS 195 (246)
Q Consensus 140 d~It~H~E~~----~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-------vD~VLvMs 195 (246)
+.|.+|--.. ...+ ...++++++.--.+=+|..-=++.+.+..++.. +|-|++-+
T Consensus 159 ~~i~~t~~~~~g~~~g~~-~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 159 EEIVHTEIEKDGTLQEHD-FSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp CEEEEEETTHHHHTCCCC-HHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred CEEEEEeecccccCCcCC-HHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 9999986321 0122 346666665432344554444667888888765 88888754
No 349
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=61.93 E-value=84 Score=27.69 Aligned_cols=117 Identities=12% Similarity=0.107 Sum_probs=67.5
Q ss_pred eeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCC
Q 025927 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGAD 140 (246)
Q Consensus 61 sPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad 140 (246)
...++..+. .+.+.++.+.++|+|.+++-. | .| .++++++|+. ++++-+. +..+ ...+.+.++|+|
T Consensus 67 gvnl~~~~~-~~~~~~~~a~~~g~d~V~~~~--g--~p-----~~~i~~l~~~-g~~v~~~--v~~~-~~a~~~~~~GaD 132 (332)
T 2z6i_A 67 GVNIMLLSP-FVEDIVDLVIEEGVKVVTTGA--G--NP-----SKYMERFHEA-GIIVIPV--VPSV-ALAKRMEKIGAD 132 (332)
T ss_dssp EEEECTTST-THHHHHHHHHHTTCSEEEECS--S--CG-----GGTHHHHHHT-TCEEEEE--ESSH-HHHHHHHHTTCS
T ss_pred EEEecCCCC-CHHHHHHHHHHCCCCEEEECC--C--Ch-----HHHHHHHHHc-CCeEEEE--eCCH-HHHHHHHHcCCC
Confidence 334443332 367788899999999998643 2 12 5678888874 6665543 3443 456778889999
Q ss_pred EEEEcc-CCcc---cccHHHHHHHHHHc-CCcEEEEEcCC-CChHHHHHhhhh-cceEEE
Q 025927 141 IVSVHC-EQSS---TIHLHRTLNQIKDL-GAKAGVVLNPA-TSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 141 ~It~H~-E~~~---~~~~~~~i~~Ik~~-G~k~GlAlnP~-Tpve~l~~~l~~-vD~VLv 193 (246)
.|.++- |+-. ......++..+++. ++.+ ...-+ +..+.+..++.. +|.|.+
T Consensus 133 ~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPV--iaaGGI~~~~~~~~al~~GAdgV~v 190 (332)
T 2z6i_A 133 AVIAEGMEAGGHIGKLTTMTLVRQVATAISIPV--IAAGGIADGEGAAAGFMLGAEAVQV 190 (332)
T ss_dssp CEEEECTTSSEECCSSCHHHHHHHHHHHCSSCE--EEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred EEEEECCCCCCCCCCccHHHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHHcCCCEEEe
Confidence 999962 3211 11233566666653 3322 22222 224555555443 666655
No 350
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=61.85 E-value=83 Score=27.62 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=76.1
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++ ++..++. |---|.
T Consensus 33 ~iD~~~l~~lv~~li~~Gv~gl~v~---GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKGLDSLVLA---GTTGESPTTTAAEKLEL--------------------LKAVREEVGDRAKLI 89 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEES---STTTTTTTSCHHHHHHH--------------------HHHHHHHHTTTSEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEC---ccccChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 5899999999999999999876443 33333355655544333 2222221 222355
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|+.+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 90 aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 167 (304)
T 3cpr_A 90 AGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLS 167 (304)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred ecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 565433345555666777788888888887753 223333 23344555344444588888888888887764
No 351
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=61.67 E-value=8.4 Score=34.39 Aligned_cols=54 Identities=15% Similarity=0.090 Sum_probs=26.6
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHL 122 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHL 122 (246)
.|+..+.+.++++.+.|++.|-+==+=|...|+-. .+.++++++.. +.++.+|.
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v--~~lv~~l~~~~~~~~l~~H~ 208 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIGAANPAQV--ETVLEALLARFPANQIALHF 208 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHH--HHHHHHHHTTSCGGGEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHH--HHHHHHHHHhCCCCeEEEEE
Confidence 35566666666666667766544333333332211 12334444433 35666665
No 352
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=61.29 E-value=55 Score=28.79 Aligned_cols=121 Identities=14% Similarity=0.085 Sum_probs=75.0
Q ss_pred ecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEE
Q 025927 64 ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (246)
Q Consensus 64 Il~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~I 142 (246)
+++-|+..-..++.++..+|+|.++++..+ +.++.++++.+. ..+-+++=.-|.+.+. ++...++|+++|
T Consensus 123 Vl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~--------L~~~~l~~l~~~a~~lGl~~lvevh~~eE-l~~A~~~ga~iI 193 (272)
T 3tsm_A 123 ALRKDFLFDPYQVYEARSWGADCILIIMAS--------VDDDLAKELEDTAFALGMDALIEVHDEAE-MERALKLSSRLL 193 (272)
T ss_dssp EEEESCCCSTHHHHHHHHTTCSEEEEETTT--------SCHHHHHHHHHHHHHTTCEEEEEECSHHH-HHHHTTSCCSEE
T ss_pred EEECCccCCHHHHHHHHHcCCCEEEEcccc--------cCHHHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHhcCCCEE
Confidence 456676666668999999999999999875 234555555321 1123444333446555 456678899999
Q ss_pred EEccCCcc--cccHHHHHHHHHHcC-CcEEEEEcCCCChHHHHHhhhh-cceEEE
Q 025927 143 SVHCEQSS--TIHLHRTLNQIKDLG-AKAGVVLNPATSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 143 t~H~E~~~--~~~~~~~i~~Ik~~G-~k~GlAlnP~Tpve~l~~~l~~-vD~VLv 193 (246)
.+..-... ..++..+.+.++... -.+=|+-.-=...+++..+.+. +|-|+|
T Consensus 194 Ginnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLV 248 (272)
T 3tsm_A 194 GVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLI 248 (272)
T ss_dssp EEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEE
T ss_pred EECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 99843211 224454555544432 1344555544577888888775 888888
No 353
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=61.14 E-value=61 Score=28.52 Aligned_cols=126 Identities=19% Similarity=0.202 Sum_probs=72.7
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++ ++..+++ |---|.
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~---GtTGE~~~Ls~eEr~~v--------------------i~~~~~~~~grvpVi 85 (306)
T 1o5k_A 29 ELDLESYERLVRYQLENGVNALIVL---GTTGESPTVNEDEREKL--------------------VSRTLEIVDGKIPVI 85 (306)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEES---SGGGTGGGCCHHHHHHH--------------------HHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeC---ccccchhhCCHHHHHHH--------------------HHHHHHHhCCCCeEE
Confidence 5788999999999999999876433 33223345555444333 1222221 211244
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHHH----hhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIEC----VLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~~----~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|+.+-+++.|.. +-+.+.. +.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 86 aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 86 VGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 554332344455566666778888888887753 2233332 2344454333444588888888888887765
No 354
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=61.13 E-value=38 Score=29.08 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=64.7
Q ss_pred HHHHHHHHHcCCCEEEeeeccCcccCCCCCC--HHHHhhcccCCCCCeeEEEecc-CcccchHHHHhcCCCEEEEccCCc
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIG--PLVVDALRPVTDLPLDVHLMIV-EPEQRVPDFIKAGADIVSVHCEQS 149 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg--p~~I~~ir~~t~~plDvHLMV~-~P~~~i~~~~~agad~It~H~E~~ 149 (246)
++.++.+.++|+|.+++ |.+.+. .++++.++++ ++.+ +.|+.. .|...++.+++.+..++ .+....
T Consensus 112 ~~f~~~~~~aG~dgvii--------~dl~~ee~~~~~~~~~~~-gl~~-i~l~~p~t~~~rl~~ia~~a~gfi-y~vs~~ 180 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIV--------PDLPPEEAEELKAVMKKY-VLSF-VPLGAPTSTRKRIKLICEAADEMT-YFVSVT 180 (262)
T ss_dssp HHHHHHHHHTTCCEEEC--------TTCCHHHHHHHHHHHHHT-TCEE-CCEECTTCCHHHHHHHHHHCSSCE-EEESSC
T ss_pred HHHHHHHHHcCCCEEEE--------CCCCHHHHHHHHHHHHHc-CCcE-EEEeCCCCCHHHHHHHHHhCCCCE-EEEecC
Confidence 68889999999987665 444331 1223333443 3322 345543 44556777777766655 443211
Q ss_pred ---c-----c-ccHHHHHHHHHHcCCcEEEEEcCCCC-hHHHHHhhhhcceEEEEe
Q 025927 150 ---S-----T-IHLHRTLNQIKDLGAKAGVVLNPATS-LSAIECVLDVVDLVLIMS 195 (246)
Q Consensus 150 ---~-----~-~~~~~~i~~Ik~~G~k~GlAlnP~Tp-ve~l~~~l~~vD~VLvMs 195 (246)
. . .++.+.++.+|+.. ..=|++.-+-. -+.+..+...+|.|.|=|
T Consensus 181 g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~~~~gADgvIVGS 235 (262)
T 2ekc_A 181 GTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHAREIGSFADGVVVGS 235 (262)
T ss_dssp C---------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHHHHTTSSEEEECH
T ss_pred CccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHHHHcCCCEEEECH
Confidence 0 1 23457888999864 33355555544 577777777899998843
No 355
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=61.05 E-value=45 Score=30.34 Aligned_cols=126 Identities=17% Similarity=0.219 Sum_probs=71.6
Q ss_pred EEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhc
Q 025927 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 59 ~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~a 137 (246)
.+..++.. + ....+.++.+.++|+|.+.++..-|+ | .+-.+.++++|+.+ ++|+-+. -+..+ ...+.+.++
T Consensus 143 ~~~~~i~~-~-~~~~~~a~~~~~~G~d~i~i~~~~g~--~--~~~~e~i~~ir~~~~~~pviv~-~v~~~-~~a~~a~~~ 214 (404)
T 1eep_A 143 RVGAAVSI-D-IDTIERVEELVKAHVDILVIDSAHGH--S--TRIIELIKKIKTKYPNLDLIAG-NIVTK-EAALDLISV 214 (404)
T ss_dssp CCEEEECS-C-TTHHHHHHHHHHTTCSEEEECCSCCS--S--HHHHHHHHHHHHHCTTCEEEEE-EECSH-HHHHHHHTT
T ss_pred eEEEEeCC-C-hhHHHHHHHHHHCCCCEEEEeCCCCC--h--HHHHHHHHHHHHHCCCCeEEEc-CCCcH-HHHHHHHhc
Confidence 34445543 2 23456778888899999998654331 1 23356778888876 6776652 22333 456788899
Q ss_pred CCCEEEE------ccCC-----cccccHHHHHHHHHHc--CCcEEEEEcCC-CChHHHHHhhhh-cceEEE
Q 025927 138 GADIVSV------HCEQ-----SSTIHLHRTLNQIKDL--GAKAGVVLNPA-TSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 138 gad~It~------H~E~-----~~~~~~~~~i~~Ik~~--G~k~GlAlnP~-Tpve~l~~~l~~-vD~VLv 193 (246)
|+|.|.+ |... ..... ...+..+++. ..++=|...-+ +..+++...+.. +|.|.+
T Consensus 215 Gad~I~vg~~~G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 215 GADCLKVGIGPGSICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp TCSEEEECSSCSTTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEECCCCCcCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhh
Confidence 9999999 2110 00112 2344445441 22333333333 345566665544 999988
No 356
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=60.88 E-value=39 Score=27.97 Aligned_cols=82 Identities=18% Similarity=0.201 Sum_probs=53.2
Q ss_pred CCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 100 ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 100 ~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
.+|.++.++.+|+. .+++. -+.+..+. .+.+.+.|++.+..+++.. . .++++.+|++|+++.+.- .+ ..
T Consensus 128 ~Sf~~~~l~~~~~~~p~~~~--~~l~~~~~--~~~~~~~~~~~i~~~~~~~---~-~~~v~~~~~~G~~v~~wt-vn-~~ 197 (224)
T 1vd6_A 128 SSFDPLALLALRKAAPGLPL--GFLMAEDH--SALLPCLGVEAVHPHHALV---T-EEAVAGWRKRGLFVVAWT-VN-EE 197 (224)
T ss_dssp EESCHHHHHHHHHHCTTSCE--EEEESSCC--GGGGGGSCCSEEEEBGGGC---C-HHHHHHHHHTTCEEEEEC-CC-CH
T ss_pred EeCCHHHHHHHHHHCCCCCE--EEEecccc--HHHHHHcCCcEEecCcccC---C-HHHHHHHHHCCCEEEEEe-CC-CH
Confidence 58899999999874 44443 23333321 2344567899998888742 2 367899999999887653 33 34
Q ss_pred HHHHHhhhh-cceE
Q 025927 179 SAIECVLDV-VDLV 191 (246)
Q Consensus 179 e~l~~~l~~-vD~V 191 (246)
+.+..+++. +|.|
T Consensus 198 ~~~~~l~~~GvdgI 211 (224)
T 1vd6_A 198 GEARRLLALGLDGL 211 (224)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHHHHhcCCCEE
Confidence 566666654 6765
No 357
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=60.86 E-value=63 Score=28.81 Aligned_cols=141 Identities=18% Similarity=0.284 Sum_probs=71.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCc-ccCCCCCC------HHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCC
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGR-FVPNITIG------PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGAD 140 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~-FVpN~tfg------p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad 140 (246)
|....-+..+++.+.|+|.|=+=..-.. ..+-++-. -..|+++++. +.|+. +-+.+|+. ++.-.++|++
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-~vpiS--IDT~~~~V-a~aAl~aGa~ 125 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-GVPVS--VDTRKPEV-AEEALKLGAH 125 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-CSCEE--EECSCHHH-HHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-CCeEE--EECCCHHH-HHHHHHhCCC
Confidence 4455556677778889999866553311 00111111 1245555543 55543 35556664 4455667999
Q ss_pred EEE-EccCCcccccHHHHHHHHHHcCCcEEEEEcC-CCCh------------H----HHHHhhhh-----cceEEEEeec
Q 025927 141 IVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNP-ATSL------------S----AIECVLDV-----VDLVLIMSVN 197 (246)
Q Consensus 141 ~It-~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP-~Tpv------------e----~l~~~l~~-----vD~VLvMsV~ 197 (246)
+|- +-.+ ...+++..++++|+.+-+.-+. ++|- + .++..++. ++ =.-++
T Consensus 126 iINdVsg~-----~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~---~IilD 197 (294)
T 2dqw_A 126 LLNDVTGL-----RDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVP---QVVLD 197 (294)
T ss_dssp EEECSSCS-----CCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCS---CEEEE
T ss_pred EEEECCCC-----CChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCC---cEEEc
Confidence 774 2222 2236778888998766555443 3332 1 22222211 33 23457
Q ss_pred CCCCCCcccHHHHHHHHHHHHHH
Q 025927 198 PGFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 198 PGfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
||+|=.+-.+..++-++.++++.
T Consensus 198 PG~Gf~kt~~~n~~ll~~l~~~~ 220 (294)
T 2dqw_A 198 PGFGFGKLLEHNLALLRRLDEIV 220 (294)
T ss_dssp CCTTSSCCHHHHHHHHHTHHHHH
T ss_pred CCCCcccCHHHHHHHHHHHHHHh
Confidence 98753343455666677776665
No 358
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=60.77 E-value=39 Score=26.53 Aligned_cols=77 Identities=8% Similarity=0.125 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHcCCcEEEE--EcCC--CCh---HHHHHhhhhc----ceEEEEeecC-CCCCC-----cc-----cHHHH
Q 025927 153 HLHRTLNQIKDLGAKAGVV--LNPA--TSL---SAIECVLDVV----DLVLIMSVNP-GFGGQ-----SF-----IESQV 210 (246)
Q Consensus 153 ~~~~~i~~Ik~~G~k~GlA--lnP~--Tpv---e~l~~~l~~v----D~VLvMsV~P-GfgGQ-----~F-----~~~~l 210 (246)
...+.++.+++.|.++.+. +.|+ ... +.+..++... +.+.++...| |.+.. .+ .+...
T Consensus 80 ~i~~~i~~l~~~g~~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~~~ 159 (182)
T 3can_A 80 LILKNIRRVAEADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQTP 159 (182)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECCC------------------CCBCC
T ss_pred HHHHHHHHHHhCCCeEEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHHHHhCCcCcccCCCCCCH
Confidence 4556777778888877665 4563 233 4444555544 6678888877 43221 11 12233
Q ss_pred HH--HHHHHHHHHhcCCCCeE
Q 025927 211 KK--ISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 211 ~K--I~~lr~l~~~~~~~~~I 229 (246)
++ ++++++...+.|..+.|
T Consensus 160 e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 160 SEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHcCCceEe
Confidence 55 77778888787776554
No 359
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=60.76 E-value=21 Score=33.34 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcc-----cC--C---------C-----CCCHHHHhhcccCC------CCCeeEEEe
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRF-----VP--N---------I-----TIGPLVVDALRPVT------DLPLDVHLM 123 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~F-----Vp--N---------~-----tfgp~~I~~ir~~t------~~plDvHLM 123 (246)
.+.+..+++.++|.|.+-+-.--|.. .| | + .|--++++++|+.. ++|+-+=|=
T Consensus 171 ~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis 250 (419)
T 3l5a_A 171 QYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRAT 250 (419)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecc
Confidence 34445566778899987665432211 12 1 1 35567888888743 566666553
Q ss_pred c------------cCcccchHHHHh-cCCCEEEEccCCc-----c----cc-cHHHHHHHHHHc-CCcEEEEEcCC-CCh
Q 025927 124 I------------VEPEQRVPDFIK-AGADIVSVHCEQS-----S----TI-HLHRTLNQIKDL-GAKAGVVLNPA-TSL 178 (246)
Q Consensus 124 V------------~~P~~~i~~~~~-agad~It~H~E~~-----~----~~-~~~~~i~~Ik~~-G~k~GlAlnP~-Tpv 178 (246)
. ++...+++.+.+ +|+|+|++|.-.. . .. .-..+++.||+. +-++=|..+-+ +..
T Consensus 251 ~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~ 330 (419)
T 3l5a_A 251 PEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSP 330 (419)
T ss_dssp SCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSH
T ss_pred cccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCH
Confidence 2 233456778888 9999999996311 0 00 012356677754 22233444445 678
Q ss_pred HHHHHhhhhcceEEE
Q 025927 179 SAIECVLDVVDLVLI 193 (246)
Q Consensus 179 e~l~~~l~~vD~VLv 193 (246)
+..+.+|..+|+|.+
T Consensus 331 e~Ae~~L~~aDlVai 345 (419)
T 3l5a_A 331 ESALDALQHADMVGM 345 (419)
T ss_dssp HHHHHHGGGCSEEEE
T ss_pred HHHHHHHHhCCcHHH
Confidence 888888877887765
No 360
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=60.64 E-value=8.5 Score=32.63 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=49.3
Q ss_pred HHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHH
Q 025927 78 AVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRT 157 (246)
Q Consensus 78 ~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~ 157 (246)
.+.+.|++.+|++.-. +...+++++.+++. + +.|+..+-|-...++.+.+.|+|.|+ +++|..+
T Consensus 166 ~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~-G--~~v~~WTVn~~~~~~~l~~~GVdgIi-------TD~P~~~ 229 (238)
T 3no3_A 166 ELKELGFTGLDYHYKV------LQSHPDWVKDCKVL-G--MTSNVWTVDDPKLMEEMIDMGVDFIT-------TDLPEET 229 (238)
T ss_dssp HHHHTTCCEEEEEHHH------HHHSTTHHHHHHHT-T--CEEEEECCCSHHHHHHHHHHTCSEEE-------ESCHHHH
T ss_pred HHHHCCCceEeccHHh------hhCCHHHHHHHHHC-C--CEEEEECCCCHHHHHHHHHcCCCEEE-------CCCHHHH
Confidence 3556788888775321 12346678887753 4 45666666666667788999999987 4578788
Q ss_pred HHHHHHcC
Q 025927 158 LNQIKDLG 165 (246)
Q Consensus 158 i~~Ik~~G 165 (246)
.+.+++.|
T Consensus 230 ~~~l~~r~ 237 (238)
T 3no3_A 230 QKILHSRA 237 (238)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcc
Confidence 88887765
No 361
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=60.44 E-value=53 Score=31.21 Aligned_cols=80 Identities=21% Similarity=0.229 Sum_probs=52.0
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFI 135 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~ 135 (246)
+..+...+-.. ....+.++.|.++|+|.+.+|..+|++.. -.+.++++|+.. +.++-+- -|..+ .....+.
T Consensus 244 rl~V~aavg~~--~d~~era~aLveaGvd~I~Id~a~g~~~~----v~~~i~~i~~~~~~~~vi~g-~v~t~-e~a~~~~ 315 (511)
T 3usb_A 244 RLLVGAAVGVT--ADAMTRIDALVKASVDAIVLDTAHGHSQG----VIDKVKEVRAKYPSLNIIAG-NVATA-EATKALI 315 (511)
T ss_dssp CBCCEEEECSS--TTHHHHHHHHHHTTCSEEEEECSCTTSHH----HHHHHHHHHHHCTTSEEEEE-EECSH-HHHHHHH
T ss_pred ceeeeeeeeec--cchHHHHHHHHhhccceEEecccccchhh----hhhHHHHHHHhCCCceEEee-eeccH-HHHHHHH
Confidence 34444444322 23456688889999999999998876532 235778887743 4554431 23344 4467889
Q ss_pred hcCCCEEEE
Q 025927 136 KAGADIVSV 144 (246)
Q Consensus 136 ~agad~It~ 144 (246)
++|+|.|.+
T Consensus 316 ~aGad~i~v 324 (511)
T 3usb_A 316 EAGANVVKV 324 (511)
T ss_dssp HHTCSEEEE
T ss_pred HhCCCEEEE
Confidence 999999987
No 362
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=60.26 E-value=6.8 Score=35.64 Aligned_cols=100 Identities=19% Similarity=0.364 Sum_probs=59.8
Q ss_pred cccchH---HHHhcCCCEEEEccCCc-c------cccHHHHHHHHHHcCCcEEEEEcCCCC------h------------
Q 025927 127 PEQRVP---DFIKAGADIVSVHCEQS-S------TIHLHRTLNQIKDLGAKAGVVLNPATS------L------------ 178 (246)
Q Consensus 127 P~~~i~---~~~~agad~It~H~E~~-~------~~~~~~~i~~Ik~~G~k~GlAlnP~Tp------v------------ 178 (246)
|+..++ .+.++||..+.+|+..- . .+...+++..||+.+ +++.||+.|. .
T Consensus 47 peEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~--~d~ii~~TTg~gg~~~g~~~~p~~~~~~~ 124 (316)
T 3c6c_A 47 PAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSG--TDIVLNLTCGLGAFLLPDPEDESKALPES 124 (316)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTT--CCCEEEEECCCSEEECEETTEEEEECTTC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHC--CCeEEEeCCCccccccCcccCcccccccc
Confidence 555555 45678999999998641 0 112568899999863 3666666664 1
Q ss_pred ------HHHHHhhh-hcceEEEEeecCC---C--CCC-cccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 179 ------SAIECVLD-VVDLVLIMSVNPG---F--GGQ-SFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 179 ------e~l~~~l~-~vD~VLvMsV~PG---f--gGQ-~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
+.+..+-. .-|+..+ +.| | +.. ..-..+.+.++++-+.+.++|..+++|+
T Consensus 125 ~l~~~eeR~~~~~~~~Pe~aSl---~~Gs~Nf~~~~~~~v~~n~~~~i~~~~~~~~e~Gv~pE~e~ 187 (316)
T 3c6c_A 125 DVVPVAERVKHLEDCLPEIASL---DITTGNQVEGKLEFVYLNTTRTLRAMARRFQELGIKPELEV 187 (316)
T ss_dssp EECCHHHHTHHHHHHCCSEEEE---ECCCEEEEETTEEEEECCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccCCHHHHHHHHHhcCCCeEEe---ccccccccCCCCceeecCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 11222101 3466533 444 3 211 1123566677888888888888888887
No 363
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=60.23 E-value=86 Score=27.27 Aligned_cols=126 Identities=12% Similarity=0.033 Sum_probs=75.0
Q ss_pred ccChhhHHHHHHHHHH-cCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHh--cCCCEE
Q 025927 66 SANFAKLGEQVKAVEL-AGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK--AGADIV 142 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~-~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~--agad~I 142 (246)
..|+..+++.++.+.+ .|++.+=+= |+--...++..+.-+++ ++..++ .|---|
T Consensus 20 ~iD~~~l~~lv~~li~~~Gv~gl~~~---GttGE~~~Ls~~Er~~v--------------------~~~~~~~~~grvpv 76 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVG---GSTGENFMLSTEEKKEI--------------------FRIAKDEAKDQIAL 76 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEES---SGGGTGGGSCHHHHHHH--------------------HHHHHHHHTTSSEE
T ss_pred CcCHHHHHHHHHHHHhhCCCcEEEeC---ccccchhhCCHHHHHHH--------------------HHHHHHHhCCCCeE
Confidence 5889999999999999 998876443 33323355555544333 222222 122235
Q ss_pred EEccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 143 SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 143 t~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
..+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|.=+++==.|+..|..+.++++.++.
T Consensus 77 iaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (293)
T 1f6k_A 77 IAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELY 155 (293)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHh
Confidence 5555433344555666677778888888888753 223333 23344554333434588888888888887764
No 364
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=60.04 E-value=36 Score=30.04 Aligned_cols=121 Identities=15% Similarity=0.159 Sum_probs=78.9
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEe---ccCcccchHHHHhcCCCEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLM---IVEPEQRVPDFIKAGADIV 142 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLM---V~~P~~~i~~~~~agad~I 142 (246)
.++.-+.++++.+.+.|+|-+=+=+-+ ++-.+..+.++.|-+. -++++..|-- +.||..-++.+++.|+++|
T Consensus 70 ~E~~~M~~Di~~~~~~GadGvV~G~Lt----~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rI 145 (256)
T 1twd_A 70 GEFAAILEDVRTVRELGFPGLVTGVLD----VDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARV 145 (256)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCBC----TTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeEC----CCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 356677889999999999988776654 4556777777777442 3678888875 5788989999999999999
Q ss_pred EEccCC-cccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh-hhcceEE
Q 025927 143 SVHCEQ-SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL-DVVDLVL 192 (246)
Q Consensus 143 t~H~E~-~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l-~~vD~VL 192 (246)
--+==. .+.+.+..+-+.+++.+ ++-|...-+-..+.+..++ --++.+-
T Consensus 146 LTSG~~~~a~~g~~~L~~Lv~~a~-~i~Im~GgGv~~~Ni~~l~~tGv~e~H 196 (256)
T 1twd_A 146 LTSGQKSDALQGLSKIMELIAHRD-APIIMAGAGVRAENLHHFLDAGVLEVH 196 (256)
T ss_dssp EECTTSSSTTTTHHHHHHHHTSSS-CCEEEEESSCCTTTHHHHHHHTCSEEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHhhC-CcEEEecCCcCHHHHHHHHHcCCCeEe
Confidence 887211 11223333333334445 5444444456666666665 2355544
No 365
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=59.79 E-value=94 Score=28.20 Aligned_cols=152 Identities=10% Similarity=0.090 Sum_probs=84.6
Q ss_pred CCCCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCee-EEEec-cCcccc
Q 025927 53 FSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD-VHLMI-VEPEQR 130 (246)
Q Consensus 53 ~~~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plD-vHLMV-~~P~~~ 130 (246)
++.....+.+.+=+-. ...-++.+.++|+ .+|+. +...+..+++. +++-+ +++-- ..+...
T Consensus 54 ~~~~~~~l~~avKan~---~~~v~~~l~~~G~---g~~va----------s~~E~~~~~~~-G~~~~~i~~~g~~k~~~~ 116 (425)
T 2qgh_A 54 FKGRKSLICYALKANS---NLSILSLLAHLES---GADCV----------SIGEIQRALKA-GIKPYRIVFSGVGKSAFE 116 (425)
T ss_dssp TCSSCEEEEEEGGGCC---CHHHHHHHHHTTC---EEEES----------SHHHHHHHHHT-TCCGGGEEECCTTCCHHH
T ss_pred cCcCCCEEEEEeccCC---CHHHHHHHHHcCC---eEEEe----------CHHHHHHHHHc-CCChhHEEEcCCCCCHHH
Confidence 4433556766666533 2244566667774 56654 24566666654 45333 44422 234567
Q ss_pred hHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcC--CcEEEEEcCCC-------------------ChHHHHHhhh---
Q 025927 131 VPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLG--AKAGVVLNPAT-------------------SLSAIECVLD--- 186 (246)
Q Consensus 131 i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G--~k~GlAlnP~T-------------------pve~l~~~l~--- 186 (246)
++..++.|++.+++.-+ ..+.++-+..++.| .++.|-+||+. +.+++..++.
T Consensus 117 i~~a~~~gv~~i~vds~----~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~ 192 (425)
T 2qgh_A 117 IEQALKLNILFLNVESF----MELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAK 192 (425)
T ss_dssp HHHHHHTTCSEEEECSH----HHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEeCCH----HHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHH
Confidence 88888889887777543 34555555556666 45777788751 2345555433
Q ss_pred ---hcceEEEEeecCCCCCCccc----HHHHHHHHHHHHHHHhcCCCCe
Q 025927 187 ---VVDLVLIMSVNPGFGGQSFI----ESQVKKISDLRRMCLEKGVNPW 228 (246)
Q Consensus 187 ---~vD~VLvMsV~PGfgGQ~F~----~~~l~KI~~lr~l~~~~~~~~~ 228 (246)
.++++=+|+- +|.|... ...++++.++.+.+.+.|.++.
T Consensus 193 ~~~~l~l~Gl~~H---~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 238 (425)
T 2qgh_A 193 KSAFLEPVSVHFH---IGSQLLDLEPIIEASQKVAKIAKSLIALGIDLR 238 (425)
T ss_dssp HCSSEEEEEEECC---CBSSBCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred hCCCccEEEEEEE---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3455555654 2233222 3456666666666666676654
No 366
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=59.79 E-value=30 Score=31.29 Aligned_cols=119 Identities=21% Similarity=0.186 Sum_probs=70.9
Q ss_pred HHHHHHHHHcCCCEEEeeeccCc----c-cC---------------CCCCCHHHHhhcccCC--CCCeeEEEecc-----
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGR----F-VP---------------NITIGPLVVDALRPVT--DLPLDVHLMIV----- 125 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~----F-Vp---------------N~tfgp~~I~~ir~~t--~~plDvHLMV~----- 125 (246)
.+..+++.++|.|.+-+----|. | .| ..-|--++|+++|+.. ++|+-+=|=..
T Consensus 146 ~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~ 225 (343)
T 3kru_A 146 GEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEG 225 (343)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTT
T ss_pred HHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhcc
Confidence 34455667889998877743321 1 12 1234478999999876 56777766543
Q ss_pred -----CcccchHHHHhcCCCEEEEc-cCCc------ccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhhh--cce
Q 025927 126 -----EPEQRVPDFIKAGADIVSVH-CEQS------STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLDV--VDL 190 (246)
Q Consensus 126 -----~P~~~i~~~~~agad~It~H-~E~~------~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~~--vD~ 190 (246)
+...+++.+.++ +|+|.+. -... .......++..||+.- +.=|..+-+ +..+..+.+|.. +|+
T Consensus 226 g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae~~l~~G~aD~ 303 (343)
T 3kru_A 226 GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADL 303 (343)
T ss_dssp SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCEEEEESSCCCHHHHHHHHHTTSCSE
T ss_pred CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc-CcccceeeeeeHHHHHHHHHhchhhHH
Confidence 223456667778 9999994 2100 0111235667777652 222333434 677888888865 898
Q ss_pred EEE
Q 025927 191 VLI 193 (246)
Q Consensus 191 VLv 193 (246)
|.+
T Consensus 304 V~i 306 (343)
T 3kru_A 304 VAL 306 (343)
T ss_dssp EEE
T ss_pred HHH
Confidence 765
No 367
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=59.77 E-value=20 Score=32.88 Aligned_cols=119 Identities=9% Similarity=0.009 Sum_probs=69.6
Q ss_pred HHHHHHHH-HcCCCEEEeeeccCccc-----CC-----------------CCCCHHHHhhcccCCC-CCeeEEEeccC--
Q 025927 73 GEQVKAVE-LAGCDWIHVDVMDGRFV-----PN-----------------ITIGPLVVDALRPVTD-LPLDVHLMIVE-- 126 (246)
Q Consensus 73 ~~~i~~l~-~~g~d~lHiDIMDG~FV-----pN-----------------~tfgp~~I~~ir~~t~-~plDvHLMV~~-- 126 (246)
.+..+++. ++|.|.+.+..--|..+ |+ .-|--++++++|+..+ -++-+-|=..+
T Consensus 177 ~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~ 256 (379)
T 3aty_A 177 VEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGV 256 (379)
T ss_dssp HHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCG
T ss_pred HHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccccc
Confidence 34555667 89999998876543111 22 1233567888887543 24444332221
Q ss_pred -----------cccchHHHHhcCCCEEEEccCCc-ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--cceEE
Q 025927 127 -----------PEQRVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLVL 192 (246)
Q Consensus 127 -----------P~~~i~~~~~agad~It~H~E~~-~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~--vD~VL 192 (246)
-..+++.+.++|+|+|.+|.-.. ....+.. ++.+|+.= +.=|+.+-+-..+..+++|.. +|+|.
T Consensus 257 ~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~-~iPvi~~G~it~~~a~~~l~~g~aD~V~ 334 (379)
T 3aty_A 257 HGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSY-SGVKISNLRYDFEEADQQIREGKVDAVA 334 (379)
T ss_dssp GGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTC-CSCEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred ccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHC-CCcEEEECCCCHHHHHHHHHcCCCeEEE
Confidence 12455667788999999996210 0001124 67777643 333455555568888888875 89887
Q ss_pred E
Q 025927 193 I 193 (246)
Q Consensus 193 v 193 (246)
+
T Consensus 335 i 335 (379)
T 3aty_A 335 F 335 (379)
T ss_dssp E
T ss_pred e
Confidence 6
No 368
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=59.75 E-value=22 Score=30.15 Aligned_cols=67 Identities=9% Similarity=0.069 Sum_probs=48.0
Q ss_pred HHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc----CcccchHHHHhcCCCEEEEccCCccccc
Q 025927 78 AVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV----EPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 78 ~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~----~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
.+...|++.+|++.- .+.++.++.+++. + +.||..+- |....++.+.+.|+|.|+ ++.
T Consensus 184 ~~~~~~~~~v~~~~~--------~~~~~~v~~~~~~-G--~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~-------TD~ 245 (258)
T 2o55_A 184 QACYGDANGVSMLFH--------YLTKEQVCTAHEK-G--LSVTVWMPWIFDDSEEDWKKCLELQVDLIC-------SNY 245 (258)
T ss_dssp HHHHTTCSEEEEEGG--------GCCHHHHHHHHHT-T--CEEEEECCTTCCCCHHHHHHHHHHTCSEEE-------ESC
T ss_pred HHHhcCCeEEecChh--------hcCHHHHHHHHHC-C--CEEEEeeCCCCCCCHHHHHHHHHcCCCEEE-------eCC
Confidence 356678999998742 2358899988764 4 46777777 777777889999999887 345
Q ss_pred HHHHHHHHH
Q 025927 154 LHRTLNQIK 162 (246)
Q Consensus 154 ~~~~i~~Ik 162 (246)
|..+.+.++
T Consensus 246 p~~~~~~l~ 254 (258)
T 2o55_A 246 PFGLMNFLS 254 (258)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 666655544
No 369
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=59.55 E-value=43 Score=28.41 Aligned_cols=101 Identities=15% Similarity=0.071 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
++++...++|+|.+|. |+ +.++.++..+.+ +.++-. =+.+|.+.. .-.++|+|+|-||+-. ..-
T Consensus 89 d~~~~A~~aGAd~v~~--------p~--~d~~v~~~~~~~-g~~~i~--G~~t~~e~~-~A~~~Gad~vk~FPa~--~~~ 152 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVT--------PG--ITEDILEAGVDS-EIPLLP--GISTPSEIM-MGYALGYRRFKLFPAE--ISG 152 (225)
T ss_dssp HHHHHHHHHTCSSEEC--------SS--CCHHHHHHHHHC-SSCEEC--EECSHHHHH-HHHTTTCCEEEETTHH--HHT
T ss_pred HHHHHHHHCCCCEEEe--------CC--CCHHHHHHHHHh-CCCEEE--eeCCHHHHH-HHHHCCCCEEEEccCc--ccc
Confidence 7788888999999993 43 345666665543 443322 267787654 4567899999998721 110
Q ss_pred HHHHHHHHHHcC--CcEEEEEcCCCChHHHHHhhh--hcceEE
Q 025927 154 LHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD--VVDLVL 192 (246)
Q Consensus 154 ~~~~i~~Ik~~G--~k~GlAlnP~Tpve~l~~~l~--~vD~VL 192 (246)
-...++.++..- +++ +++ =+-..+.+.+|+. -+|.|-
T Consensus 153 G~~~lk~i~~~~~~ipv-vai-GGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 153 GVAAIKAFGGPFGDIRF-CPT-GGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp HHHHHHHHHTTTTTCEE-EEB-SSCCTTTHHHHHHSTTBCCEE
T ss_pred CHHHHHHHHhhCCCCeE-EEE-CCCCHHHHHHHHhccCCEEEE
Confidence 135677776532 222 333 2556678888887 377765
No 370
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.55 E-value=13 Score=35.25 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=59.2
Q ss_pred CcccchHHHHhcCCCEEEE---ccCCc-------c------c------cc-HHHHHHHHHHcCCcEEEEEcCCCChHHHH
Q 025927 126 EPEQRVPDFIKAGADIVSV---HCEQS-------S------T------IH-LHRTLNQIKDLGAKAGVVLNPATSLSAIE 182 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~---H~E~~-------~------~------~~-~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~ 182 (246)
||+.|++.+.++|+.++.+ |.+.+ + . .| +.++.+.+|+.|+|+|+-++|+ ....
T Consensus 60 d~~~w~~~~k~aGaky~v~t~kHHdGf~lw~s~~t~~~~~~sp~~~~~~D~v~e~~~A~r~~gl~~g~Y~S~~--W~~~- 136 (443)
T 3gza_A 60 NTDQWVQAAKAAGCKFAVLTATHETGFGLWQSDVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQPGIYIGIR--WNSL- 136 (443)
T ss_dssp CHHHHHHHHHTTTCSEEEEESCCSSCCBSSCCSSCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECCS--CBTT-
T ss_pred CHHHHHHHHHHcCCCEEEEeeEeCCCcccCCCCCCCcccccCCccCCCcCHHHHHHHHHHHcCCeEEEEECcc--ccCc-
Confidence 8899999999999999877 55422 0 0 12 4478888999999999999973 1110
Q ss_pred HhhhhcceEEEEeecCCCC------CCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCC
Q 025927 183 CVLDVVDLVLIMSVNPGFG------GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV 235 (246)
Q Consensus 183 ~~l~~vD~VLvMsV~PGfg------GQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI 235 (246)
.+.. |.- .|+-+ -+.|...++ .++++++..-|.=-.|+.||+-
T Consensus 137 ~~~~--~~~-----~~~~~~~~~~~~~~y~~~~~---~Ql~ELlt~Ygpid~lWfDg~~ 185 (443)
T 3gza_A 137 LGIH--NFK-----AEGEGAFARNRQAWYKRLCE---KMVTELCTRYGDLYMIWFDGGA 185 (443)
T ss_dssp TTEE--TTE-----ESCCHHHHHHHHHHHHHHHH---HHHHHHHHSSCCCSEEEETTCC
T ss_pred cccc--ccc-----cccccccCccccHHHHHHHH---HHHHHHHHhCCCccEEEEeCCC
Confidence 0011 110 02211 133444443 4667777655432368899986
No 371
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=59.37 E-value=48 Score=29.76 Aligned_cols=46 Identities=22% Similarity=0.251 Sum_probs=34.2
Q ss_pred CcccchHHHHhcCCCEEEEc----cC-Ccc----cccHHHHHHHHHHcCCcE-EEE
Q 025927 126 EPEQRVPDFIKAGADIVSVH----CE-QSS----TIHLHRTLNQIKDLGAKA-GVV 171 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H----~E-~~~----~~~~~~~i~~Ik~~G~k~-GlA 171 (246)
+++..++.+.++|.+.|-+| .. ... ...+.++.+.+++.|+++ ++.
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~ 89 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVT 89 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEE
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEe
Confidence 56778888899999999999 32 111 135677888899999998 454
No 372
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=59.20 E-value=14 Score=33.25 Aligned_cols=100 Identities=18% Similarity=0.125 Sum_probs=43.4
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchH--HHHhcCCCEEEE
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVP--DFIKAGADIVSV 144 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~--~~~~agad~It~ 144 (246)
|+..+.+.++++.+.|++.|-+==+=|.-.|.-. .+.++++++.. +.++.+|.=-..=..... .-+++|+++|--
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v--~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~ 244 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEET--FQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHA 244 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHH--HHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHH--HHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEE
Confidence 3445555566666666665433223333333211 12344444433 556666653332222222 224456665543
Q ss_pred cc----CCcccccHHHHHHHHHHc-CCcEE
Q 025927 145 HC----EQSSTIHLHRTLNQIKDL-GAKAG 169 (246)
Q Consensus 145 H~----E~~~~~~~~~~i~~Ik~~-G~k~G 169 (246)
=+ |.......+.++..++.. |+..|
T Consensus 245 tv~GlG~~aGN~~~E~lv~~L~~~~g~~tg 274 (337)
T 3ble_A 245 SINGLGERAGNTPLEALVTTIHDKSNSKTN 274 (337)
T ss_dssp BGGGCSSTTCBCBHHHHHHHHHHHSSCCCC
T ss_pred ecccccccccchhHHHHHHHHHHhcCCCCC
Confidence 22 211123344555555544 54433
No 373
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=59.18 E-value=6.6 Score=36.06 Aligned_cols=80 Identities=14% Similarity=0.083 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC-CCEEEEccCCc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG-ADIVSVHCEQS 149 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag-ad~It~H~E~~ 149 (246)
...+-++.|+++|+|+||+-- |. .|++.++.+|+..+.|+-+==-+ +|+.. +.+++.| +|.|.+=-..+
T Consensus 251 ~~~~la~~l~~~Gvd~i~v~~--~~------~~~~~~~~ik~~~~iPvi~~Ggi-t~e~a-~~~l~~G~aD~V~iGR~~l 320 (361)
T 3gka_A 251 TFGHVARELGRRRIAFLFARE--SF------GGDAIGQQLKAAFGGPFIVNENF-TLDSA-QAALDAGQADAVAWGKLFI 320 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC--CC------STTCCHHHHHHHHCSCEEEESSC-CHHHH-HHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECC--CC------CCHHHHHHHHHHcCCCEEEeCCC-CHHHH-HHHHHcCCccEEEECHHhH
Confidence 345567888999999999854 32 23467888888767774332223 56654 4555555 99999854332
Q ss_pred ccccHHHHHHHHHH
Q 025927 150 STIHLHRTLNQIKD 163 (246)
Q Consensus 150 ~~~~~~~~i~~Ik~ 163 (246)
+.++ +.+++++
T Consensus 321 adPd---l~~k~~~ 331 (361)
T 3gka_A 321 ANPD---LPRRFKL 331 (361)
T ss_dssp HCTT---HHHHHHH
T ss_pred hCcH---HHHHHHh
Confidence 2233 4555553
No 374
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=59.02 E-value=29 Score=28.35 Aligned_cols=69 Identities=25% Similarity=0.256 Sum_probs=43.4
Q ss_pred HHHHHHHcCCCEEEeee-ccCcccC--CCCCCHHHHhhcccCCC-CCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 75 QVKAVELAGCDWIHVDV-MDGRFVP--NITIGPLVVDALRPVTD-LPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 75 ~i~~l~~~g~d~lHiDI-MDG~FVp--N~tfgp~~I~~ir~~t~-~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
++....+.|+|++-+-- .|+.--+ ...++++.++++++..+ +|+-+===+ +|++. ..+.++|++.+.+=
T Consensus 128 e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI-~~~nv-~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 128 EVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGI-TIDNA-APVIQAGADGVSMI 200 (227)
T ss_dssp HHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSC-CTTTS-HHHHHTTCSEEEES
T ss_pred HHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCC-CHHHH-HHHHHcCCCEEEEh
Confidence 36667778999998621 1211112 24678889999987665 665432223 36664 45778899988874
No 375
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=58.94 E-value=12 Score=32.49 Aligned_cols=80 Identities=16% Similarity=0.295 Sum_probs=54.5
Q ss_pred EEEeccCccc-----chHHHHhcCCCEEEEccCC-cccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEE
Q 025927 120 VHLMIVEPEQ-----RVPDFIKAGADIVSVHCEQ-SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 120 vHLMV~~P~~-----~i~~~~~agad~It~H~E~-~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLv 193 (246)
.|++.-+|.. .++.+.++|+|.|-+=... .+.++..++++.+|+ ...=+.|-|..+ .++-.-+|.+++
T Consensus 10 ~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~--~~~Pivl~~y~~----n~i~~gvDg~ii 83 (234)
T 2f6u_A 10 RHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ--YGLPIVVEPSDP----SNVVYDVDYLFV 83 (234)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT--SCCCEEECCSSC----CCCCCCSSEEEE
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC--CCCCEEEecCCc----chhhcCCCEEEE
Confidence 4777777764 6778899999999887642 123456777888876 455666666652 122457999999
Q ss_pred EeecCCCCCCccc
Q 025927 194 MSVNPGFGGQSFI 206 (246)
Q Consensus 194 MsV~PGfgGQ~F~ 206 (246)
+.+.+.- ...|.
T Consensus 84 pdLp~ee-~~~~~ 95 (234)
T 2f6u_A 84 PTVLNSA-DGDWI 95 (234)
T ss_dssp EEETTBS-BGGGT
T ss_pred cccCCCC-CHHHH
Confidence 9998865 33444
No 376
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=58.79 E-value=67 Score=27.12 Aligned_cols=113 Identities=18% Similarity=0.186 Sum_probs=69.0
Q ss_pred HHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc-c-CCcc---
Q 025927 76 VKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH-C-EQSS--- 150 (246)
Q Consensus 76 i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H-~-E~~~--- 150 (246)
++.+.++|+|.+|+ .|...- --.++++.++++ +++.-.++-...|...++.+.+.+.+++.+- . -.+.
T Consensus 111 ~~~a~~aGadgv~v--~d~~~~----~~~~~~~~~~~~-g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~ 183 (262)
T 1rd5_A 111 LAKMKEAGVHGLIV--PDLPYV----AAHSLWSEAKNN-NLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRA 183 (262)
T ss_dssp THHHHHTTCCEEEC--TTCBTT----THHHHHHHHHHT-TCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTS
T ss_pred HHHHHHcCCCEEEE--cCCChh----hHHHHHHHHHHc-CCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCc
Confidence 34478899999997 344321 123455555554 5665566656666777777777776666431 1 0000
Q ss_pred --cccHHHHHHHHHHcCCcEEEEEcCCCC-hHHHHHhhhh-cceEEEEee
Q 025927 151 --TIHLHRTLNQIKDLGAKAGVVLNPATS-LSAIECVLDV-VDLVLIMSV 196 (246)
Q Consensus 151 --~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-ve~l~~~l~~-vD~VLvMsV 196 (246)
.....+.++++|+.. ..=|...-+-. .+.+..++.. +|.|.|=|-
T Consensus 184 ~~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSa 232 (262)
T 1rd5_A 184 NVNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIGSA 232 (262)
T ss_dssp CBCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CCCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEChH
Confidence 123556788888763 33355555655 7888888887 999988653
No 377
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=58.53 E-value=14 Score=33.34 Aligned_cols=128 Identities=15% Similarity=0.142 Sum_probs=68.6
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCC-CCC--HHHHhhccc---CCCCCe-eEEEe-----------ccCcc---
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIG--PLVVDALRP---VTDLPL-DVHLM-----------IVEPE--- 128 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~-tfg--p~~I~~ir~---~t~~pl-DvHLM-----------V~~P~--- 128 (246)
..+.+.++.+.+.|.+.+-+- |.++.|.- +.. ...++.+++ -+++.+ .+|.- ..+|.
T Consensus 33 ~~~~e~l~~aa~~G~~~vEl~--~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~ 110 (387)
T 1bxb_A 33 LDPVYVVHKLAELGAYGVNLH--DEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWV 110 (387)
T ss_dssp CCHHHHHHHHHHHTCSEEEEE--HHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHH
T ss_pred CCHHHHHHHHHHhCCCEEEec--CcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHH
Confidence 467888999999999987664 55555532 211 234444443 346655 46631 12332
Q ss_pred ---------cchHHHHhcCCCEEEEcc--CC------cc--------cccHHHHHHHHHHc--CCcEEEEEcCC------
Q 025927 129 ---------QRVPDFIKAGADIVSVHC--EQ------SS--------TIHLHRTLNQIKDL--GAKAGVVLNPA------ 175 (246)
Q Consensus 129 ---------~~i~~~~~agad~It~H~--E~------~~--------~~~~~~~i~~Ik~~--G~k~GlAlnP~------ 175 (246)
+.++...+.|+..|.+|. +. .. .+.+.++....++. |++.++=-.|.
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~~~~~~~~~ 190 (387)
T 1bxb_A 111 RAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKPNEPRGDI 190 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCc
Confidence 233344557999999986 10 00 01234455555666 56655433331
Q ss_pred --CChHHHHHhhhhcce-E-EEEeecCC
Q 025927 176 --TSLSAIECVLDVVDL-V-LIMSVNPG 199 (246)
Q Consensus 176 --Tpve~l~~~l~~vD~-V-LvMsV~PG 199 (246)
..++.+..+++.++. - +-+..+.|
T Consensus 191 ~~~t~~~~~~ll~~v~~~~~vgl~lD~g 218 (387)
T 1bxb_A 191 YFATVGSMLAFIHTLDRPERFGLNPEFA 218 (387)
T ss_dssp SSCSHHHHHHHHTTSSSGGGEEECCBHH
T ss_pred cCCCHHHHHHHHHHcCCccceEEEEecC
Confidence 134555667766653 1 34455555
No 378
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=58.51 E-value=93 Score=27.33 Aligned_cols=126 Identities=17% Similarity=0.173 Sum_probs=73.2
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=|.| .++..+.-+++ ++..+++ |---|.
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~---~~Ls~~Er~~v--------------------~~~~~~~~~gr~pvi 87 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEF---PFLTSSERLEV--------------------VSRVRQAMPKNRLLL 87 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTG---GGSCHHHHHHH--------------------HHHHHHTSCTTSEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccch---hhCCHHHHHHH--------------------HHHHHHHcCCCCcEE
Confidence 5799999999999999998877443333333 45555443333 2222332 222344
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC-----ChHHHHHh----hhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT-----SLSAIECV----LDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T-----pve~l~~~----l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..++.++.|..+-+++.|.. +-+.+..| .+.+|+=+++==.||..|..+.++++.++.
T Consensus 88 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 167 (307)
T 3s5o_A 88 AGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLS 167 (307)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHh
Confidence 555332344555666677777887777777753 22233322 334454333444577788888888876664
No 379
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=58.45 E-value=13 Score=33.52 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=46.1
Q ss_pred cHHHHHHHHHHcC--CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeE
Q 025927 153 HLHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 153 ~~~~~i~~Ik~~G--~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I 229 (246)
.+...++..|+.. .++.+= -+ .++.+++.+. -+|.|++=. |.++.+++. .+++ +-+..|
T Consensus 195 ~i~~Av~~~r~~~p~~~ieVE--vd-tlde~~eAl~aGaD~I~LDn---------~~~~~l~~a---v~~i---~~~v~i 256 (298)
T 3gnn_A 195 GVGEALDAAFALNAEVPVQIE--VE-TLDQLRTALAHGARSVLLDN---------FTLDMMRDA---VRVT---EGRAVL 256 (298)
T ss_dssp CHHHHHHHHHHHC--CCCEEE--ES-SHHHHHHHHHTTCEEEEEES---------CCHHHHHHH---HHHH---TTSEEE
T ss_pred CHHHHHHHHHHhCCCCCEEEE--eC-CHHHHHHHHHcCCCEEEECC---------CCHHHHHHH---HHHh---CCCCeE
Confidence 4566777777652 333333 23 3355555554 488888844 444444433 3333 235789
Q ss_pred EEeCCCChhhhhhccc
Q 025927 230 EVDGGVGPKNAYKVPN 245 (246)
Q Consensus 230 ~VDGGI~~e~i~~l~~ 245 (246)
++=||||++|++++.+
T Consensus 257 eaSGGI~~~~i~~~a~ 272 (298)
T 3gnn_A 257 EVSGGVNFDTVRAIAE 272 (298)
T ss_dssp EEESSCSTTTHHHHHH
T ss_pred EEEcCCCHHHHHHHHH
Confidence 9999999999998764
No 380
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=58.35 E-value=42 Score=28.34 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=43.5
Q ss_pred ecccChhhHHHHHHHHHHcCCCEE--EeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcc----cchHHHHhc
Q 025927 64 ILSANFAKLGEQVKAVELAGCDWI--HVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE----QRVPDFIKA 137 (246)
Q Consensus 64 Il~aD~~~l~~~i~~l~~~g~d~l--HiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~----~~i~~~~~a 137 (246)
+++.|+....+-++++... ++++ |+++ | ..+|++.+++|++..++++-.=|=.-|-- .+.+.+.+.
T Consensus 5 ivALD~~~al~l~~~l~~~-v~~~KvG~~l----~---~~~G~~~v~~L~~~~g~~VflDlK~~DIpnTv~~a~~~~~~~ 76 (215)
T 3ve9_A 5 ILSLDSPIPEETLRKLNGK-VAGIKVGWPL----L---LNLGKEKVKELVGLVDGIKILDLKLADIDNTMILIVDELKDI 76 (215)
T ss_dssp EEEESSCCCHHHHHHHHTT-SSEEEEEHHH----H---HHHCHHHHHHHHTTCCSEEEEEEEECSCHHHHHHHHHHHTTT
T ss_pred EEECCHHHHHHHHHHhCCc-CcEEEecHHH----H---HhhCHHHHHHHHHhcCCcEEEEecccCchhHHHHHHHHHHHh
Confidence 4456663344445555432 4443 3322 1 36799999999874354333333333322 244667788
Q ss_pred CCCEEEEccCC
Q 025927 138 GADIVSVHCEQ 148 (246)
Q Consensus 138 gad~It~H~E~ 148 (246)
+|++|+|.=.
T Consensus 77 -ad~vTvh~~~ 86 (215)
T 3ve9_A 77 -TNSFIAHAFV 86 (215)
T ss_dssp -CSEEEEEGGG
T ss_pred -hheEEEeCCC
Confidence 9999999753
No 381
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=58.34 E-value=72 Score=26.28 Aligned_cols=50 Identities=14% Similarity=0.166 Sum_probs=31.9
Q ss_pred eEEEecc-CcccchHHHHhcCCCEEEEccCC--------cccccHHHHHHHHHHcCCcE
Q 025927 119 DVHLMIV-EPEQRVPDFIKAGADIVSVHCEQ--------SSTIHLHRTLNQIKDLGAKA 168 (246)
Q Consensus 119 DvHLMV~-~P~~~i~~~~~agad~It~H~E~--------~~~~~~~~~i~~Ik~~G~k~ 168 (246)
=+|+-.. .+...++...++|.+.|-+.... .....+.++.+.++++|+++
T Consensus 5 G~~~~~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (287)
T 2x7v_A 5 GAHMPISKGFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW 63 (287)
T ss_dssp EEECCCTTCGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG
T ss_pred eeeeccccCHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc
Confidence 3455443 45567778888888888775421 01124667777788888883
No 382
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=58.32 E-value=98 Score=27.27 Aligned_cols=125 Identities=17% Similarity=0.160 Sum_probs=63.5
Q ss_pred cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEE
Q 025927 65 LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIV 142 (246)
Q Consensus 65 l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~I 142 (246)
-..|+..+++.++.+.+.|++.+=+==.=| ...++..+.-+++- +..++. |---|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTG---E~~~Ls~~Er~~v~--------------------~~~~~~~~grvpv 80 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFS---EQFAITDDERDVLT--------------------RTILEHVAGRVPV 80 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGG---TGGGSCHHHHHHHH--------------------HHHHHHHTTSSCE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcccc---CcccCCHHHHHHHH--------------------HHHHHHhCCCCcE
Confidence 368999999999999999988764433333 33455554433331 112221 11224
Q ss_pred EEccCCcccccHHHHHHHHHHcCCcEEEEEcCCC------ChHHHHHh----hhhcce-EEEEeecCCCCCCcccHHHHH
Q 025927 143 SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT------SLSAIECV----LDVVDL-VLIMSVNPGFGGQSFIESQVK 211 (246)
Q Consensus 143 t~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T------pve~l~~~----l~~vD~-VLvMsV~PGfgGQ~F~~~~l~ 211 (246)
..+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+..| .+.+|+ |.+-- .|+ .|..+.++++.
T Consensus 81 iaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn-~P~-tg~~l~~~~~~ 158 (309)
T 3fkr_A 81 IVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQD-APA-SGTALSAPFLA 158 (309)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEE-CGG-GCCCCCHHHHH
T ss_pred EEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEe-CCC-CCCCCCHHHHH
Confidence 4444322233444555555566666666665542 12222222 233343 22222 355 56666666665
Q ss_pred HHH
Q 025927 212 KIS 214 (246)
Q Consensus 212 KI~ 214 (246)
++.
T Consensus 159 ~La 161 (309)
T 3fkr_A 159 RMA 161 (309)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 383
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=58.24 E-value=9.3 Score=34.14 Aligned_cols=107 Identities=18% Similarity=0.114 Sum_probs=68.7
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCC-CCCCHHHHhhcccCCC--CCeeEEEeccCcccchHHHHhcC-CCEEEE
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPN-ITIGPLVVDALRPVTD--LPLDVHLMIVEPEQRVPDFIKAG-ADIVSV 144 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN-~tfgp~~I~~ir~~t~--~plDvHLMV~~P~~~i~~~~~ag-ad~It~ 144 (246)
+...-+..+.++++|+|.+ |++. + =.++.++.+.+..+ +|+-+ .|++.|..-.++|.+.| ..+|++
T Consensus 165 ~~~ai~Ra~ay~eAGAd~i--------~~e~~~-~~~~~~~~i~~~~~~~vP~i~-n~~~~~~~~~~eL~~lG~v~~v~~ 234 (290)
T 2hjp_A 165 QQEAVRRGQAYEEAGADAI--------LIHSRQ-KTPDEILAFVKSWPGKVPLVL-VPTAYPQLTEADIAALSKVGIVIY 234 (290)
T ss_dssp HHHHHHHHHHHHHTTCSEE--------EECCCC-SSSHHHHHHHHHCCCSSCEEE-CGGGCTTSCHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcEE--------EeCCCC-CCHHHHHHHHHHcCCCCCEEE-eccCCCCCCHHHHHhcCCeeEEEe
Confidence 4555566778889999976 4444 2 12456666655444 77655 46656777789999999 999999
Q ss_pred ccCCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 145 HCEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 145 H~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
..-.. +..-..++.+.|++.|-..++. .--.+.+++..++.
T Consensus 235 ~~~~~raa~~a~~~~~~~i~~~g~~~~~~-~~~~~~~e~~~l~~ 277 (290)
T 2hjp_A 235 GNHAIRAAVGAVREVFARIRRDGGIREVD-AALPSVKEIIELQG 277 (290)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHTSSTTTT-TTSCCHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCccccc-ccCCCHHHHHHHcC
Confidence 86531 1223567788888877544321 12256677766653
No 384
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=58.16 E-value=31 Score=38.74 Aligned_cols=122 Identities=20% Similarity=0.305 Sum_probs=76.9
Q ss_pred HHhhcccCCC--CCeeEEEeccCcc------cchHHHHhcCCCE--EEEccCCcccccHHHHHHHHHHcCCcEEEEEcCC
Q 025927 106 VVDALRPVTD--LPLDVHLMIVEPE------QRVPDFIKAGADI--VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA 175 (246)
Q Consensus 106 ~I~~ir~~t~--~plDvHLMV~~P~------~~i~~~~~agad~--It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~ 175 (246)
.|+.+|+.|+ .|+-|.||..+|. .+++.+++.|+.. +++=.- ...+...+.++++.|+++ +.+.|+
T Consensus 633 ~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag---~p~~~~~~~~i~~lG~~v-i~~~~~ 708 (2051)
T 2uv8_G 633 AIDSVVSQIEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIGAG---VPSLEVASEYIETLGLKY-LGLKPG 708 (2051)
T ss_dssp HHHHHHHHSCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEESS---CCCHHHHHHHHHHSCCSC-EEECCC
T ss_pred HHHHHHHhcCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEecCC---CCchhhHHHHHHHcCCEE-EEecCc
Confidence 3445566554 7999999999986 6788888999988 776432 344556777888888887 466776
Q ss_pred CChHHHHHhh---h-hcceEEEEeecCCCCCCc-----ccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 176 TSLSAIECVL---D-VVDLVLIMSVNPGFGGQS-----FIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 176 Tpve~l~~~l---~-~vD~VLvMsV~PGfgGQ~-----F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
+.. .+...+ + -+|.++++.++=|-+|.. +-..++.-+.++++. .++-+-+=|||.-
T Consensus 709 ~~~-a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~-----~~ipviaaGGi~d 773 (2051)
T 2uv8_G 709 SID-AISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRH-----PNIMLIFGSGFGS 773 (2051)
T ss_dssp SHH-HHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTC-----TTBCCEEESSCCS
T ss_pred hHH-HHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhc-----CCceEEEeCCCCC
Confidence 533 332222 2 479988888875543332 223444334333332 2455777888853
No 385
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=58.11 E-value=1.1e+02 Score=27.68 Aligned_cols=99 Identities=13% Similarity=0.084 Sum_probs=58.3
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCC-eeEEEecc-CcccchHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP-LDVHLMIV-EPEQRVPDF 134 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~p-lDvHLMV~-~P~~~i~~~ 134 (246)
.+.+.+.+=+-.. ..-++.+.+.| ..+|+.- ...+..+++. +++ -++|+.-. .+...++..
T Consensus 41 ~~~i~~avKan~~---~~v~~~l~~~G---~g~~vas----------~~E~~~~~~~-G~~~~~I~~~g~~k~~~~i~~a 103 (428)
T 2j66_A 41 AIQFYLSLKANNN---IHLAKLFRQWG---LGVEVAS----------AGELALARHA-GFSAENIIFSGPGKKRSELEIA 103 (428)
T ss_dssp TEEEEEEGGGCCC---HHHHHHHHHTT---CEEEESS----------HHHHHHHHHT-TCCGGGEEECCSCCCHHHHHHH
T ss_pred CcEEEEEeeeCCC---HHHHHHHHHcC---CeEEEeC----------HHHHHHHHHc-CCCcCeEEEeCCCCCHHHHHHH
Confidence 4555555554332 23455566666 2666643 3455666654 443 34776644 344567788
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHHHcC--CcEEEEEcCCC
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLG--AKAGVVLNPAT 176 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik~~G--~k~GlAlnP~T 176 (246)
++.|...+++.-+ ..+.++-+..++.| .+++|-+||+.
T Consensus 104 ~~~~v~~~~vds~----~el~~l~~~a~~~~~~~~V~lrvn~g~ 143 (428)
T 2j66_A 104 VQSGIYCIIAESV----EELFYIEELAEKENKTARVAIRINPDK 143 (428)
T ss_dssp HHHTCSEEEECSH----HHHHHHHHHHHHHTCCEEEEEEEECSS
T ss_pred HHCCCCEEEECCH----HHHHHHHHHHHhhCCCceEEEEEcCCC
Confidence 8888767776543 34555555566666 56888888874
No 386
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=58.08 E-value=39 Score=26.83 Aligned_cols=90 Identities=23% Similarity=0.246 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHcCCC-EEEeee-ccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc---
Q 025927 71 KLGEQVKAVELAGCD-WIHVDV-MDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH--- 145 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d-~lHiDI-MDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H--- 145 (246)
.+.+.++++...|+. .+-.++ .+|..- ++..+.++++++.++.|+-+=--+..|+...+.+ +.|++-+.+=
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~g~~~---g~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~-~~G~~~~~vg~a~ 206 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAASVF 206 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTCCS---CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HHTCSEEEESHHH
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCCCccc---cccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHH-HcCcHHHhhhHHH
Confidence 566777888888887 555565 566542 3347789999888889987766677787766555 5899987643
Q ss_pred cCCcccccHHHHHHHHHHcCC
Q 025927 146 CEQSSTIHLHRTLNQIKDLGA 166 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~ 166 (246)
++. ..++.++++.+++.|+
T Consensus 207 ~~~--~~~~~~~~~~l~~~~~ 225 (237)
T 3cwo_X 207 HFR--EIDVRELKEYLKKHGV 225 (237)
T ss_dssp HTT--SSCHHHHHHHHHTTTC
T ss_pred HcC--CCCHHHHHHHHHHCCC
Confidence 121 3467788888887775
No 387
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=58.08 E-value=7 Score=35.89 Aligned_cols=79 Identities=10% Similarity=0.061 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC-CCEEEEccCCc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG-ADIVSVHCEQS 149 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag-ad~It~H~E~~ 149 (246)
...+-++.|+++|+|+||+--- . .|++.++.+|+..+.|+-+==-+ +|+... .+++.| +|.|.+=-...
T Consensus 243 ~~~~la~~l~~~Gvd~i~v~~~--~------~~~~~~~~ik~~~~iPvi~~Ggi-t~e~a~-~~l~~g~aD~V~iGR~~l 312 (362)
T 4ab4_A 243 TFTYVARELGKRGIAFICSRER--E------ADDSIGPLIKEAFGGPYIVNERF-DKASAN-AALASGKADAVAFGVPFI 312 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC--C------CTTCCHHHHHHHHCSCEEEESSC-CHHHHH-HHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCC--C------CCHHHHHHHHHHCCCCEEEeCCC-CHHHHH-HHHHcCCccEEEECHHhH
Confidence 3445678899999999998643 2 23467888888767775432223 666544 455555 99999853322
Q ss_pred ccccHHHHHHHHH
Q 025927 150 STIHLHRTLNQIK 162 (246)
Q Consensus 150 ~~~~~~~~i~~Ik 162 (246)
+.++ +.++++
T Consensus 313 anPd---l~~k~~ 322 (362)
T 4ab4_A 313 ANPD---LPARLA 322 (362)
T ss_dssp HCTT---HHHHHH
T ss_pred hCcH---HHHHHH
Confidence 2223 455554
No 388
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=57.93 E-value=6 Score=34.02 Aligned_cols=62 Identities=11% Similarity=0.120 Sum_probs=42.7
Q ss_pred CCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh-hhhhhcc
Q 025927 175 ATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVP 244 (246)
Q Consensus 175 ~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~l~ 244 (246)
+.|++..+.|-+ .+|.+.+.-.+.-+.|..-+.+.+++|.+ + ....++|+|||+. ++++.+.
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~------~--~~~pl~vGGGIrs~e~~~~~l 94 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAK------E--VSVNLQVGGGIRSKEEVKALL 94 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHH------H--CCSEEEEESSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHH------h--cCCCeEeccccccHHHHHHHH
Confidence 457776666654 48888888888777777777676666543 1 2357999999964 6766553
No 389
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=57.81 E-value=17 Score=32.82 Aligned_cols=104 Identities=16% Similarity=0.202 Sum_probs=67.3
Q ss_pred hHHHHHHHH---HHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEec--cCcccchHHHHhcCCCEEEE
Q 025927 71 KLGEQVKAV---ELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMI--VEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 71 ~l~~~i~~l---~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV--~~P~~~i~~~~~agad~It~ 144 (246)
-+++.|+++ .++|+|.+ |+|.+. .++.++.+.+.. +.|+-+-++. ..|..-.++|.+.|+.+|++
T Consensus 168 gldeAi~Ra~ay~eAGAD~i--------fi~g~~-~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~ 238 (302)
T 3fa4_A 168 GYEESVARLRAARDAGADVG--------FLEGIT-SREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEMGFRIIIF 238 (302)
T ss_dssp CHHHHHHHHHHHHTTTCSEE--------EETTCC-CHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEE--------eecCCC-CHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHHcCCCEEEE
Confidence 356666555 46787755 777653 577888886643 4676553322 23555688999999999999
Q ss_pred ccCCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 145 HCEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 145 H~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
+.-.. +..-..+.++.|++.|.. +. ....+.+++..++.
T Consensus 239 ~~~~~raa~~A~~~~~~~i~~~g~~-~~--~~~~~~~el~~~~g 279 (302)
T 3fa4_A 239 PFAALGPAVAAMREAMEKLKRDGIP-GL--DKEMTPQMLFRVCG 279 (302)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHSSC-CC--CTTCCHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCC-Cc--ccCCCHHHHHHHcC
Confidence 87542 123467888899998864 22 33355666666653
No 390
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=57.68 E-value=66 Score=28.18 Aligned_cols=112 Identities=19% Similarity=0.235 Sum_probs=68.7
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCChH-------------HHHHhhhhcce-
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVVDL- 190 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve-------------~l~~~l~~vD~- 190 (246)
.+.+.++|++++.+ |.|- . +.+.+.+=++...++|+++=+.+.-. ++ .++..++.++.
T Consensus 82 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGEt--leere~g~t~~vv~~Ql~~~l~~~~~~ 159 (255)
T 3qst_A 82 VPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGEH--LSEREAGKASEFVSAQIEKMIPAIPAG 159 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCC--HHHHHTTCHHHHHHHHHHHHGGGSCTT
T ss_pred HHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCc--HHHHHcCCHHHHHHHHHHHHHccCCHH
Confidence 56778899998887 4331 0 12234444677788999988777632 22 24445543211
Q ss_pred ---EEEEeecCCC---CCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhcc
Q 025927 191 ---VLIMSVNPGF---GGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 191 ---VLvMsV~PGf---gGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~ 244 (246)
=++..-||=+ .|..-.|+-.+.+ +.+|+++.+. .-+..|.-=|+|+.+|+.++.
T Consensus 160 ~~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~ 225 (255)
T 3qst_A 160 KWDDVVIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELA 225 (255)
T ss_dssp CGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHHH
T ss_pred HhCCEEEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHHh
Confidence 2567899932 4666556555544 4445554332 123679999999999998874
No 391
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=57.61 E-value=21 Score=32.43 Aligned_cols=74 Identities=15% Similarity=0.270 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcC--CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEE
Q 025927 154 LHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIE 230 (246)
Q Consensus 154 ~~~~i~~Ik~~G--~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~ 230 (246)
+...++..|+.. .++.+ -.+| ++.+++.+. .+|.|++=+ |.++.+++ +.+.++ -+..|+
T Consensus 218 i~~Av~~ar~~~p~~kIeV--EVdt-ldea~eAl~aGaD~I~LDn---------~~~~~l~~---av~~l~---~~v~ie 279 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEV--ETET-LAELEEAISAGADIIMLDN---------FSLEMMRE---AVKINA---GRAALE 279 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEE--EESS-HHHHHHHHHTTCSEEEEES---------CCHHHHHH---HHHHHT---TSSEEE
T ss_pred HHHHHHHHHHhCCCCeEEE--EECC-HHHHHHHHHcCCCEEEECC---------CCHHHHHH---HHHHhC---CCCeEE
Confidence 556777777653 34444 3333 466666554 489888843 44555544 344443 257899
Q ss_pred EeCCCChhhhhhccc
Q 025927 231 VDGGVGPKNAYKVPN 245 (246)
Q Consensus 231 VDGGI~~e~i~~l~~ 245 (246)
+=||||++|++++.+
T Consensus 280 aSGGIt~~~I~~~a~ 294 (320)
T 3paj_A 280 NSGNITLDNLKECAE 294 (320)
T ss_dssp EESSCCHHHHHHHHT
T ss_pred EECCCCHHHHHHHHH
Confidence 999999999998764
No 392
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=57.34 E-value=21 Score=30.35 Aligned_cols=83 Identities=14% Similarity=0.023 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc--Ccccc---hHHHHhcCCCEEEEc
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV--EPEQR---VPDFIKAGADIVSVH 145 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~--~P~~~---i~~~~~agad~It~H 145 (246)
.+++..+..++.|+|++=+. | +.+++.++++++..++|+-++==+. +++.+ +..+.++|++.+.+=
T Consensus 167 ~~~~~a~~a~~~Gad~i~~~-----~----~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg 237 (273)
T 2qjg_A 167 LVAHAARLGAELGADIVKTS-----Y----TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVG 237 (273)
T ss_dssp HHHHHHHHHHHTTCSEEEEC-----C----CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEC-----C----CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 33333377888899988775 2 3678888888876678888776665 34443 444557899988763
Q ss_pred cCCcccccHHHHHHHHH
Q 025927 146 CEQSSTIHLHRTLNQIK 162 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik 162 (246)
-.-....++.+.++.++
T Consensus 238 ~~i~~~~~~~~~~~~l~ 254 (273)
T 2qjg_A 238 RNIFQHDDVVGITRAVC 254 (273)
T ss_dssp HHHHTSSSHHHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHH
Confidence 21111234555544443
No 393
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=57.18 E-value=1.2e+02 Score=27.96 Aligned_cols=71 Identities=17% Similarity=0.234 Sum_probs=46.6
Q ss_pred cChhhHHHHHHHH-----HHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCE
Q 025927 67 ANFAKLGEQVKAV-----ELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 141 (246)
Q Consensus 67 aD~~~l~~~i~~l-----~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~ 141 (246)
.|-..+.+.++.+ .++|.+++-+| ||=|...- . ..| +.
T Consensus 26 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iD--dgW~~~~~-----------d-----------------------~~G-~~ 68 (417)
T 1szn_A 26 IDESKFLSAAELIVSSGLLDAGYNYVNID--DCWSMKDG-----------R-----------------------VDG-HI 68 (417)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHTCCEEECC--SSCBCTTC-----------C-----------------------BTT-BC
T ss_pred CCHHHHHHHHHHHHHcCchhhCCCEEEEC--CCccCCCC-----------C-----------------------CCC-CE
Confidence 5677888888888 78899998876 67764320 0 001 11
Q ss_pred EEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCC
Q 025927 142 VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT 176 (246)
Q Consensus 142 It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T 176 (246)
....+-+ ...+..+.++||+.|+|+||-..|++
T Consensus 69 -~~~~~kF-P~Gl~~l~~~i~~~Glk~Giw~~~g~ 101 (417)
T 1szn_A 69 -APNATRF-PDGIDGLAKKVHALGLKLGIYSTAGT 101 (417)
T ss_dssp -CBCTTTC-TTHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred -EECcccC-CcCHHHHHHHHHHcCCEEEEEeCCCC
Confidence 1111111 11377889999999999999998875
No 394
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=57.13 E-value=19 Score=32.93 Aligned_cols=116 Identities=20% Similarity=0.166 Sum_probs=71.0
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCccc-----C--C-------------CCCCHHHHhhcccCCCC-CeeEEEeccC----
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFV-----P--N-------------ITIGPLVVDALRPVTDL-PLDVHLMIVE---- 126 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FV-----p--N-------------~tfgp~~I~~ir~~t~~-plDvHLMV~~---- 126 (246)
+.+..+++.++|.|.+-+..--|... | | .-|--++++++|+..+- |+-+-|=..+
T Consensus 163 f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g 242 (361)
T 3gka_A 163 FRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHT 242 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSS
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCC
Confidence 33455667788999988777543222 2 1 12447899999886432 6666554322
Q ss_pred ---------cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc-CCcEEEEEcCCCChHHHHHhhhh--cceEEE
Q 025927 127 ---------PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV--VDLVLI 193 (246)
Q Consensus 127 ---------P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~-G~k~GlAlnP~Tpve~l~~~l~~--vD~VLv 193 (246)
...+++.+.++|+|+|.+|.-.. .. .+++.+|+. ++. |..+-+...+..+.+|.. +|+|.+
T Consensus 243 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-~~---~~~~~ik~~~~iP--vi~~Ggit~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 243 MGDSDPAATFGHVARELGRRRIAFLFARESFG-GD---AIGQQLKAAFGGP--FIVNENFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS-TT---CCHHHHHHHHCSC--EEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC-CH---HHHHHHHHHcCCC--EEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 12345667778999999996421 11 245566654 332 444445577888888875 898766
No 395
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=56.74 E-value=54 Score=29.42 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=54.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCC---------CCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcC
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT---------IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~t---------fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
|....-+..+++.+.|+|.|=+=..-. =|+.. ==...|++|++.++.|+. +=+.+|+. ++.-+++|
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeST--rPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiS--IDT~~~~V-a~aAl~aG 105 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGEST--RPGSSYVEIEEEIQRVVPVIKAIRKESDVLIS--IDTWKSQV-AEAALAAG 105 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHCCCEEE--EECSCHHH-HHHHHHTT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC--CCCCCCCCHHHHHHHHHHHHHHHHhhCCceEE--EeCCCHHH-HHHHHHcC
Confidence 455566677788889999875544321 12110 002355666665555432 34556654 45667789
Q ss_pred CCEEE-EccCCcccccHHHHHHHHHHcCCcEEEEEc
Q 025927 139 ADIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (246)
Q Consensus 139 ad~It-~H~E~~~~~~~~~~i~~Ik~~G~k~GlAln 173 (246)
+++|- +-.+. .+ .+++..++++|+.+-+.-+
T Consensus 106 a~iINDVsg~~---~d-~~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 106 ADLVNDITGLM---GD-EKMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp CCEEEETTTTC---SC-TTHHHHHHHHTCEEEEECC
T ss_pred CCEEEECCCCC---CC-hHHHHHHHHcCCCEEEEec
Confidence 99884 44331 11 2456667888877666543
No 396
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=56.70 E-value=25 Score=29.57 Aligned_cols=15 Identities=7% Similarity=-0.159 Sum_probs=7.8
Q ss_pred HHHHhcCCCEEEEcc
Q 025927 132 PDFIKAGADIVSVHC 146 (246)
Q Consensus 132 ~~~~~agad~It~H~ 146 (246)
+.+.+.|....++|.
T Consensus 75 ~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 75 ILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHTCCEEEEEC
T ss_pred HHHHHcCCeEEEEec
Confidence 334445666555555
No 397
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=56.63 E-value=1e+02 Score=26.90 Aligned_cols=115 Identities=16% Similarity=0.256 Sum_probs=67.2
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCC-------h----HHHHHhhhhcce---
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATS-------L----SAIECVLDVVDL--- 190 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-------v----e~l~~~l~~vD~--- 190 (246)
.+.+.++|++++.+ |-|- . +.+.+.+-++...++|+++=+.+.-... . ..+...++.++-
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (250)
T 1yya_A 79 ARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGP 158 (250)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSG
T ss_pred HHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 46778899998876 4331 0 1233455666777899998777763311 1 223334443421
Q ss_pred -EEEEeecCCC---CCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhccc
Q 025927 191 -VLIMSVNPGF---GGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 191 -VLvMsV~PGf---gGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
=++..-||=+ .|+.=.|+-.+.+ +.+|+.+.+. .-+..|.-=|+|+.+|++++.+
T Consensus 159 ~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~ 223 (250)
T 1yya_A 159 EALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLS 223 (250)
T ss_dssp GGCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHT
T ss_pred CcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHc
Confidence 2366889922 2555455444333 3335544321 1257899999999999998764
No 398
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=56.32 E-value=1.1e+02 Score=27.15 Aligned_cols=127 Identities=17% Similarity=0.129 Sum_probs=76.6
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|+|.+=+==.=| ...++..+.-+++ ++..+++ |---|.
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTG---E~~~Ls~~Er~~v--------------------~~~~~~~~~grvpvi 84 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNA---EAFLLTREERAQL--------------------IATARKAVGPDFPIM 84 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGG---TGGGSCHHHHHHH--------------------HHHHHHHHCTTSCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccc---ChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 58999999999999999998774433333 3345555443333 2222221 222345
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCC-----CChHHHHH----hhhhcceEEEEeecCCCC-CCcccHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-----TSLSAIEC----VLDVVDLVLIMSVNPGFG-GQSFIESQVKKI 213 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-----Tpve~l~~----~l~~vD~VLvMsV~PGfg-GQ~F~~~~l~KI 213 (246)
.+.=+.++.+..+..++.++.|..+-+++.|. ++-+.+.. +.+.+|+=+++==.||.. |..+.++++.++
T Consensus 85 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~L 164 (318)
T 3qfe_A 85 AGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTI 164 (318)
T ss_dssp EECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHH
Confidence 56543334556667777778898888888882 22333333 334566645555568875 899999888777
Q ss_pred HH
Q 025927 214 SD 215 (246)
Q Consensus 214 ~~ 215 (246)
.+
T Consensus 165 a~ 166 (318)
T 3qfe_A 165 AR 166 (318)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 399
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=56.27 E-value=73 Score=25.52 Aligned_cols=114 Identities=16% Similarity=0.106 Sum_probs=60.4
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEe-ccCcccchHHHHhcCCCEEEEcc-CCc--
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM-IVEPEQRVPDFIKAGADIVSVHC-EQS-- 149 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLM-V~~P~~~i~~~~~agad~It~H~-E~~-- 149 (246)
..++.+.++|+|.+|+...-+.- . -...++.++++ +.++=+-+. +.+|..-++.+.+.|+|+|.+|. ...
T Consensus 68 ~~~~~a~~~Gad~v~vh~~~~~~----~-~~~~~~~~~~~-g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~ 141 (207)
T 3ajx_A 68 LEADIAFKAGADLVTVLGSADDS----T-IAGAVKAAQAH-NKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQA 141 (207)
T ss_dssp HHHHHHHHTTCSEEEEETTSCHH----H-HHHHHHHHHHH-TCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHHT
T ss_pred HHHHHHHhCCCCEEEEeccCChH----H-HHHHHHHHHHc-CCceEEEEecCCChHHHHHHHHHhCCCEEEEEecccccc
Confidence 34778889999999875543310 0 01234444442 333211111 12677766677778999995543 110
Q ss_pred ccccHH-HHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceEEEEe
Q 025927 150 STIHLH-RTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIMS 195 (246)
Q Consensus 150 ~~~~~~-~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~VLvMs 195 (246)
...++. +.++.+++. ..-+.+-++-..+.+.+++.. +|.|.+-+
T Consensus 142 ~g~~~~~~~i~~~~~~--~~pi~v~GGI~~~~~~~~~~aGad~vvvGs 187 (207)
T 3ajx_A 142 KPGFDLNGLLAAGEKA--RVPFSVAGGVKVATIPAVQKAGAEVAVAGG 187 (207)
T ss_dssp STTCCTHHHHHHHHHH--TSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred cCCCchHHHHHHhhCC--CCCEEEECCcCHHHHHHHHHcCCCEEEEee
Confidence 011111 344444433 334566666666777776654 78776543
No 400
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=56.24 E-value=32 Score=29.68 Aligned_cols=113 Identities=13% Similarity=0.089 Sum_probs=60.4
Q ss_pred cEEeeeecccChh---hHHHHHHHHHHcCCCEEEeeec---cCccc---CC-CCC-CHHHHhhcccCCCCCe-eEEEec-
Q 025927 58 IIVSPSILSANFA---KLGEQVKAVELAGCDWIHVDVM---DGRFV---PN-ITI-GPLVVDALRPVTDLPL-DVHLMI- 124 (246)
Q Consensus 58 ~~IsPSIl~aD~~---~l~~~i~~l~~~g~d~lHiDIM---DG~FV---pN-~tf-gp~~I~~ir~~t~~pl-DvHLMV- 124 (246)
.+|+-.+++.--. .+.+.++.+.+.|.+.+-+-.- +|.+- |. ++. .++.++++.+-.++.+ .+|.-.
T Consensus 21 ~~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~ 100 (305)
T 3obe_A 21 KKMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPS 100 (305)
T ss_dssp CCCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCS
T ss_pred CceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeecccc
Confidence 3455555555432 6889999999999998887654 22221 11 111 3444444433356643 355322
Q ss_pred -c--Cc---c-------cchHHHHhcCCCEEEEccCCc--c-------cccHHHHHHHHHHcCCcEEE
Q 025927 125 -V--EP---E-------QRVPDFIKAGADIVSVHCEQS--S-------TIHLHRTLNQIKDLGAKAGV 170 (246)
Q Consensus 125 -~--~P---~-------~~i~~~~~agad~It~H~E~~--~-------~~~~~~~i~~Ik~~G~k~Gl 170 (246)
. +| + +.++...+.|+++|.++.-.. . .+.+.++....++.|++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 168 (305)
T 3obe_A 101 LREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGY 168 (305)
T ss_dssp CCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 1 11 1 123334556999998873110 0 11244555566777887776
No 401
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=55.99 E-value=39 Score=28.09 Aligned_cols=48 Identities=13% Similarity=0.026 Sum_probs=27.8
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCee-EEE
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD-VHL 122 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plD-vHL 122 (246)
--..+++.++.+.+.|.+.+-+..- .....+.++++-+-.++.+. +|.
T Consensus 21 ~~~~~~~~l~~~~~~G~~~vEl~~~-------~~~~~~~~~~~l~~~gl~~~~~~~ 69 (269)
T 3ngf_A 21 NEVPFLERFRLAAEAGFGGVEFLFP-------YDFDADVIARELKQHNLTQVLFNM 69 (269)
T ss_dssp TTSCHHHHHHHHHHTTCSEEECSCC-------TTSCHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHcCCCEEEecCC-------ccCCHHHHHHHHHHcCCcEEEEec
Confidence 3356778888888888887766531 12344555544333466444 353
No 402
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=55.88 E-value=35 Score=28.32 Aligned_cols=93 Identities=13% Similarity=0.049 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHcCCCEEEe-ee-ccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCC
Q 025927 71 KLGEQVKAVELAGCDWIHV-DV-MDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHi-DI-MDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~ 148 (246)
...+.++++++.|++.+-+ ++ -||.+ .++..+.++++++.+++|+-+===+.+|++.. .+.++|+|.+.+= ++
T Consensus 153 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~---~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~-~~~~~Gadgv~vg-sa 227 (252)
T 1ka9_F 153 HAVEWAVKGVELGAGEILLTSMDRDGTK---EGYDLRLTRMVAEAVGVPVIASGGAGRMEHFL-EAFQAGAEAALAA-SV 227 (252)
T ss_dssp EHHHHHHHHHHHTCCEEEEEETTTTTTC---SCCCHHHHHHHHHHCSSCEEEESCCCSHHHHH-HHHHTTCSEEEES-HH
T ss_pred cHHHHHHHHHHcCCCEEEEecccCCCCc---CCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHH-HHHHCCCHHHHHH-HH
Confidence 4567788888899997654 32 24543 23457899999988888987766677787654 4567899988763 11
Q ss_pred c--ccccHHHHHHHHHHcCCcE
Q 025927 149 S--STIHLHRTLNQIKDLGAKA 168 (246)
Q Consensus 149 ~--~~~~~~~~i~~Ik~~G~k~ 168 (246)
+ ...++.++++++++.|+.+
T Consensus 228 l~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 228 FHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp HHTTSSCHHHHHHHHHHTTCCB
T ss_pred HHcCCCCHHHHHHHHHHCCCCc
Confidence 1 1236778888888887643
No 403
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=55.84 E-value=81 Score=27.54 Aligned_cols=113 Identities=16% Similarity=0.214 Sum_probs=66.1
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCC-------ChH----HHHHhhhhcc----
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPAT-------SLS----AIECVLDVVD---- 189 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~T-------pve----~l~~~l~~vD---- 189 (246)
.+.+.++|++++.+ |-|- . +.+.+.+-++...++|+++=+.+.-.. ..+ .++..++.++
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 160 (251)
T 2vxn_A 81 MPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 160 (251)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGG
T ss_pred HHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHh
Confidence 46778999998876 4431 0 123345566677889999887775321 111 2223333331
Q ss_pred eEEEEeecC----CCCCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhcc
Q 025927 190 LVLIMSVNP----GFGGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 190 ~VLvMsV~P----GfgGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~ 244 (246)
-=+++.-|| | .|..=.|+-.+.+ +.+|+++.+. .-+..|.-=|+|+.+|+.++.
T Consensus 161 ~~~vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~ 224 (251)
T 2vxn_A 161 NQVVLAYEPVWAIG-TGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLY 224 (251)
T ss_dssp GGEEEEECCGGGSS-SSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHH
T ss_pred CCEEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHh
Confidence 125679999 5 3555444444333 3345444331 113679999999999998875
No 404
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=55.82 E-value=99 Score=28.82 Aligned_cols=121 Identities=13% Similarity=0.234 Sum_probs=64.1
Q ss_pred HHHhhcccCCCCCeeEEEecc--CcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCC-------
Q 025927 105 LVVDALRPVTDLPLDVHLMIV--EPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA------- 175 (246)
Q Consensus 105 ~~I~~ir~~t~~plDvHLMV~--~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~------- 175 (246)
..+..+++. +++-+..++.. .+...++..++.|+..++++-+ .++.++-+. ....+++|-+||+
T Consensus 103 ~E~~~~~~a-G~~~~~iv~~g~~k~~~ei~~a~~~gv~~~~vds~----~el~~l~~~--~~~~~V~lRvn~g~~~~~~~ 175 (471)
T 2oo0_A 103 TEIQLVQSL-GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSE----VELMKVARA--HPKAKLVLRIATDDSKAVCR 175 (471)
T ss_dssp HHHHHHHHT-TCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSH----HHHHHHHHH--CTTCEEEEEECCCCTTSSBC
T ss_pred HHHHHHHHc-CCChhhEEEeCCCCCHHHHHHHHHCCCCEEEECCH----HHHHHHHHh--CCCCeEEEEEcCCCCCCCCC
Confidence 345555543 55444444432 3456677778888876666533 344333322 1357889999987
Q ss_pred ------CChHHHHHhhhh-----cceEEEEeecCCCCCCcccHH----HHHHHHHHHHHHHhcCCCCe-EEEeCCC
Q 025927 176 ------TSLSAIECVLDV-----VDLVLIMSVNPGFGGQSFIES----QVKKISDLRRMCLEKGVNPW-IEVDGGV 235 (246)
Q Consensus 176 ------Tpve~l~~~l~~-----vD~VLvMsV~PGfgGQ~F~~~----~l~KI~~lr~l~~~~~~~~~-I~VDGGI 235 (246)
.+.+.+..++.. ++++-+++ . +|.|.+.++ .+++.+++.+...+.|.++. |-+=||.
T Consensus 176 ~~~RfG~~~~~~~~~~~~~~~~~l~l~Glh~-H--~gs~~~~~~~~~~a~~~~~~~~~~~~~~G~~~~~ldiGGG~ 248 (471)
T 2oo0_A 176 LSVKFGATLRTSRLLLERAKELNIDVVGVSF-H--VGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGF 248 (471)
T ss_dssp CTTTSCBCHHHHHHHHHHHHHTTCEEEEEEE-C--CCBSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECCCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEE-e--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEECCCc
Confidence 224455554442 33333333 2 344444333 44555566666667777654 4444565
No 405
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=55.71 E-value=24 Score=31.13 Aligned_cols=86 Identities=23% Similarity=0.235 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCC
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~ 148 (246)
+...-+..+.++++|+|.+ |++.+ =.++.++.+.+..++|+. ++...|..-.++|.+.|..+|++..-.
T Consensus 167 ~~~ai~Ra~ay~eAGAd~i--------~~e~~-~~~~~~~~i~~~~~~P~n--~~~~~~~~~~~eL~~lGv~~v~~~~~~ 235 (275)
T 2ze3_A 167 LAETVRRGQAYADAGADGI--------FVPLA-LQSQDIRALADALRVPLN--VMAFPGSPVPRALLDAGAARVSFGQSL 235 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEE--------ECTTC-CCHHHHHHHHHHCSSCEE--EECCTTSCCHHHHHHTTCSEEECTTHH
T ss_pred HHHHHHHHHHHHHCCCCEE--------EECCC-CCHHHHHHHHHhcCCCEE--EecCCCCCCHHHHHHcCCcEEEEChHH
Confidence 3444556677788999865 66653 235778888765568874 333345666899999999999998652
Q ss_pred c--ccccHHHHHHHHHHcC
Q 025927 149 S--STIHLHRTLNQIKDLG 165 (246)
Q Consensus 149 ~--~~~~~~~~i~~Ik~~G 165 (246)
. +..-..+..+.|++.|
T Consensus 236 ~raa~~a~~~~~~~i~~~g 254 (275)
T 2ze3_A 236 MLATLGLVQRMAAELHAAE 254 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 1 1233567778888877
No 406
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=55.63 E-value=54 Score=28.56 Aligned_cols=125 Identities=18% Similarity=0.129 Sum_probs=73.9
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVSV 144 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It~ 144 (246)
.|+..+++.++.+.+.|++.+=+==.=| ...++..+.-+++ ++..+++ |---|..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttG---E~~~Ls~~Er~~v--------------------~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTG---EATTMTETERKET--------------------IKFVIDKVNKRIPVIA 75 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGG---TGGGSCHHHHHHH--------------------HHHHHHHHTTSSCEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcccc---ChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEEE
Confidence 7889999999999999998764433333 3345555444333 1222221 2122445
Q ss_pred ccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHHHh----hhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 145 HCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIECV----LDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 145 H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~~~----l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+..+ .+.+|+=+++==.|+..|..+.++++.|+.
T Consensus 76 Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3a5f_A 76 GTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELC 152 (291)
T ss_dssp ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred eCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 55433344555666777788888888888753 23333333 233444333444588888888888887764
No 407
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=55.57 E-value=32 Score=29.15 Aligned_cols=85 Identities=20% Similarity=0.217 Sum_probs=55.1
Q ss_pred CCCCHHHHhhcccC-CCCCeeEEEeccC------cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEE
Q 025927 100 ITIGPLVVDALRPV-TDLPLDVHLMIVE------PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL 172 (246)
Q Consensus 100 ~tfgp~~I~~ir~~-t~~plDvHLMV~~------P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAl 172 (246)
.+|.++.++.+|+. .++++ =+.... +..+++.....|++.+..++... . .++++.+|++|+++.+.
T Consensus 138 ~SF~~~~l~~~~~~~p~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~v~~~~~~G~~V~~W- 210 (250)
T 3ks6_A 138 SSFLLASMDELWKATTRPRL--WLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTA---D-AGLMAQVQAAGLDFGCW- 210 (250)
T ss_dssp EESCHHHHHHHHHHCCSCEE--EEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGC---C-HHHHHHHHHTTCEEEEE-
T ss_pred EeCCHHHHHHHHHHCCCCcE--EEEecccccccchhHHHHHHHhcCCCEEecchhhC---C-HHHHHHHHHCCCEEEEE-
Confidence 58999999999874 44443 233321 12234444567999988887642 2 36789999999998776
Q ss_pred cCCCChHHHHHhhhh-cceEE
Q 025927 173 NPATSLSAIECVLDV-VDLVL 192 (246)
Q Consensus 173 nP~Tpve~l~~~l~~-vD~VL 192 (246)
-.+ ..+.++.++.. +|.|.
T Consensus 211 Tvn-~~~~~~~l~~~GVDgIi 230 (250)
T 3ks6_A 211 AAH-TPSQITKALDLGVKVFT 230 (250)
T ss_dssp CCC-SHHHHHHHHHHTCSEEE
T ss_pred eCC-CHHHHHHHHHcCCCEEE
Confidence 333 34666777665 77754
No 408
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=55.50 E-value=40 Score=29.59 Aligned_cols=67 Identities=21% Similarity=0.126 Sum_probs=46.7
Q ss_pred HHHHhcCCCEEEEccCCccc---ccHHHHHHHHH----HcCCcEEEEEcCCCC-------hHHHHHhhhhcceEEEEeec
Q 025927 132 PDFIKAGADIVSVHCEQSST---IHLHRTLNQIK----DLGAKAGVVLNPATS-------LSAIECVLDVVDLVLIMSVN 197 (246)
Q Consensus 132 ~~~~~agad~It~H~E~~~~---~~~~~~i~~Ik----~~G~k~GlAlnP~Tp-------ve~l~~~l~~vD~VLvMsV~ 197 (246)
+.+.+.|-|-|-+-+|-... .+...+++.+| +.|...-+|+.|.+. --.+..+.+.+|+|.||+=+
T Consensus 105 ~~~~~~gfDGiDiDwE~p~~~d~~~~~~ll~eLr~~l~~~~~~Ls~av~~~~~~~~~~~~~~d~~~l~~~vD~i~vMtYD 184 (319)
T 3cz8_A 105 DLVSTRGYGGVTIDFEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSDNIPWLRGYDYGGIGAVVNYMFIMAYD 184 (319)
T ss_dssp HHHHHHTCSEEEEECCSCCGGGHHHHHHHHHHHHHHHHHTTCEEEEEEECCSCSCCGGGTTCCHHHHHHHCSEEEEECCC
T ss_pred HHHHHhCCCeEEEeccCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCcccccchhcccCHHHHHhhCCEEEEEeec
Confidence 34455689999999995322 23445555555 358889999988764 12456677889999999987
Q ss_pred C
Q 025927 198 P 198 (246)
Q Consensus 198 P 198 (246)
-
T Consensus 185 ~ 185 (319)
T 3cz8_A 185 W 185 (319)
T ss_dssp S
T ss_pred c
Confidence 4
No 409
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=55.45 E-value=33 Score=30.48 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcC---CcEEEEEcCCCChHHHHHhhh-hcceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeE
Q 025927 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (246)
Q Consensus 154 ~~~~i~~Ik~~G---~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I 229 (246)
+...++..|+.. .++|+-. .| ++.+++.+. -+|+|++=. |.|+.++ ++.+.... +..+
T Consensus 182 i~~av~~ar~~~~~~~~IgVev--~t-~eea~eA~~aGaD~I~ld~---------~~~~~~k---~av~~v~~---~ipi 243 (286)
T 1x1o_A 182 VGEAVRRAKARAPHYLKVEVEV--RS-LEELEEALEAGADLILLDN---------FPLEALR---EAVRRVGG---RVPL 243 (286)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEE--SS-HHHHHHHHHHTCSEEEEES---------CCHHHHH---HHHHHHTT---SSCE
T ss_pred HHHHHHHHHHhCCCCCEEEEEe--CC-HHHHHHHHHcCCCEEEECC---------CCHHHHH---HHHHHhCC---CCeE
Confidence 345677777654 6788855 33 666666554 489987754 3444444 33333322 4679
Q ss_pred EEeCCCChhhhhhccc
Q 025927 230 EVDGGVGPKNAYKVPN 245 (246)
Q Consensus 230 ~VDGGI~~e~i~~l~~ 245 (246)
++=||||.+|++++.+
T Consensus 244 ~AsGGIt~eni~~~a~ 259 (286)
T 1x1o_A 244 EASGNMTLERAKAAAE 259 (286)
T ss_dssp EEESSCCHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHH
Confidence 9999999999998754
No 410
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=55.35 E-value=48 Score=29.78 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=33.7
Q ss_pred CcccchHHHHhcCCCEEEEc----cCCcc-----cccHHHHHHHHHHcCCcE-EEEE
Q 025927 126 EPEQRVPDFIKAGADIVSVH----CEQSS-----TIHLHRTLNQIKDLGAKA-GVVL 172 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H----~E~~~-----~~~~~~~i~~Ik~~G~k~-GlAl 172 (246)
++...++.+.++|.+.|-+| ..... ...+.++-+.+++.|+++ .+..
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~ 90 (393)
T 1xim_A 34 DPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPMVTT 90 (393)
T ss_dssp CHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEEC
T ss_pred CHHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEEEec
Confidence 45677888899999999999 32100 135667788889999998 4544
No 411
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=55.05 E-value=16 Score=31.63 Aligned_cols=69 Identities=19% Similarity=0.197 Sum_probs=47.5
Q ss_pred HHHHHHHHcCCCEEEeeeccCcccCCCC-CCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 74 EQVKAVELAGCDWIHVDVMDGRFVPNIT-IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMDG~FVpN~t-fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
++++++++.|+|++ +- +=|.+--+-. .+++.++.+++.+++|+-+--=+.+|++ +..+.++|||.|.+=
T Consensus 138 ~~a~~~~~~gad~v-~~-~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~ed-a~~~~~~GAdgViVG 207 (264)
T 1xm3_A 138 VLARKLEELGVHAI-MP-GASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKD-AAYAMELGADGVLLN 207 (264)
T ss_dssp HHHHHHHHHTCSCB-EE-CSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHH-HHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCEE-EE-CCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHH-HHHHHHcCCCEEEEc
Confidence 45677777888887 11 1111211211 2588999999888899888777888887 557788999988763
No 412
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=54.98 E-value=1.3e+02 Score=27.70 Aligned_cols=159 Identities=13% Similarity=0.168 Sum_probs=84.3
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEecc--CcccchHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV--EPEQRVPDF 134 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~--~P~~~i~~~ 134 (246)
...+.+.+=+-.. ..-++.+.+.|+ .+||.. ...+..+++. +++-+..++.- .+...++..
T Consensus 77 ~~~i~yavKAn~~---~~v~~~l~~~G~---g~dvaS----------~~E~~~~~~~-G~~~~~I~~~g~~k~~~ei~~a 139 (441)
T 3n2b_A 77 PHLICYAVKANSN---LGVLNTLARLGS---GFDIVS----------VGELERVLAA-GGDPSKVVFSGVGKTEAEMKRA 139 (441)
T ss_dssp CEEEEEEGGGCCC---HHHHHHHHHTTC---EEEESS----------HHHHHHHHHT-TCCGGGEEECCTTCCHHHHHHH
T ss_pred CcEEEEEeccCCC---HHHHHHHHHcCC---cEEEeC----------HHHHHHHHHc-CCCcccEEEcCCCCCHHHHHHH
Confidence 4556666554332 344566666775 667643 3345555553 55434333322 345677788
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHHHcC--CcEEEEEcCCC-------------------ChHHHHHhhh---hcce
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLG--AKAGVVLNPAT-------------------SLSAIECVLD---VVDL 190 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik~~G--~k~GlAlnP~T-------------------pve~l~~~l~---~vD~ 190 (246)
++.|...+++.-+ .++.++.+..++.| .+++|=+||+. +.+.+..++. ..+.
T Consensus 140 ~~~gv~~~~vds~----~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~~~~~~~~~~~~~~ 215 (441)
T 3n2b_A 140 LQLKIKCFNVESE----PELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPN 215 (441)
T ss_dssp HHTTCSEEEECSH----HHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHHCTT
T ss_pred HHCCCCEEEEcCH----HHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHHHHHHHHHHhcCCC
Confidence 8888876665432 45666666666666 45677777752 2355555443 2233
Q ss_pred EEEEeecCCCCCCcccH----HHHHHHHHHHHHHHhcCCCCe-EEEeCCCC
Q 025927 191 VLIMSVNPGFGGQSFIE----SQVKKISDLRRMCLEKGVNPW-IEVDGGVG 236 (246)
Q Consensus 191 VLvMsV~PGfgGQ~F~~----~~l~KI~~lr~l~~~~~~~~~-I~VDGGI~ 236 (246)
+-+..+--=+|.|...+ ..++++.++.+.+.+.|.++. |-+=||..
T Consensus 216 l~l~Glh~H~gs~~~d~~~~~~a~~~~~~l~~~l~~~G~~l~~LdiGGG~g 266 (441)
T 3n2b_A 216 LDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLG 266 (441)
T ss_dssp EEEEEEECCTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCSCCC
T ss_pred eEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEECCCcc
Confidence 33322222234444433 445566666555556676654 55557763
No 413
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=54.70 E-value=66 Score=28.04 Aligned_cols=121 Identities=14% Similarity=0.141 Sum_probs=65.7
Q ss_pred cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEEE
Q 025927 65 LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVS 143 (246)
Q Consensus 65 l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~It 143 (246)
++-|+.--..+++...++|+|.+|+=.-|.. ++.++.+.+. ..+-+++=+.+.+++. ++...++|+|+|.
T Consensus 117 l~kdfiid~~qv~~A~~~GAD~VlLi~a~l~--------~~~l~~l~~~a~~lGl~~lvev~t~ee-~~~A~~~Gad~IG 187 (272)
T 3qja_A 117 LRKDFVVQPYQIHEARAHGADMLLLIVAALE--------QSVLVSMLDRTESLGMTALVEVHTEQE-ADRALKAGAKVIG 187 (272)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEEEGGGSC--------HHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHTCSEEE
T ss_pred EECccccCHHHHHHHHHcCCCEEEEecccCC--------HHHHHHHHHHHHHCCCcEEEEcCCHHH-HHHHHHCCCCEEE
Confidence 4556554445788888999999998333321 2333333221 1123444445567665 4555678999999
Q ss_pred EccCCcc--cccHHHHHHHHHHcC-CcEEEEEcCCCChHHHHHhhhh-cceEEEE
Q 025927 144 VHCEQSS--TIHLHRTLNQIKDLG-AKAGVVLNPATSLSAIECVLDV-VDLVLIM 194 (246)
Q Consensus 144 ~H~E~~~--~~~~~~~i~~Ik~~G-~k~GlAlnP~Tpve~l~~~l~~-vD~VLvM 194 (246)
+...... ..++..+.+..+... -.+=++..-=+..+.+..+... +|-|+|=
T Consensus 188 v~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 188 VNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp EESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred ECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 8853210 123333332222221 1233443322447888888776 8888873
No 414
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=54.65 E-value=40 Score=30.88 Aligned_cols=126 Identities=11% Similarity=0.117 Sum_probs=75.0
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCc-----------c-c------CC-------------------CCCCHHHHh
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGR-----------F-V------PN-------------------ITIGPLVVD 108 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~-----------F-V------pN-------------------~tfgp~~I~ 108 (246)
.-|-....+.+++.+++|++.|=++|-=-. | . +| -.+..+.|+
T Consensus 131 ~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~ 210 (352)
T 3sgz_A 131 KSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLS 210 (352)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHH
Confidence 347777778899999999998877762110 0 0 11 135567899
Q ss_pred hcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCc----ccccHHHHHHHHHH-cCCcEEEEEcCC--CChHHH
Q 025927 109 ALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS----STIHLHRTLNQIKD-LGAKAGVVLNPA--TSLSAI 181 (246)
Q Consensus 109 ~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~----~~~~~~~~i~~Ik~-~G~k~GlAlnP~--Tpve~l 181 (246)
+||+.++.|+-+-.- .+++ ....+.++|+|.|+++--.- ......+.+..+++ .+-++=|..+-+ ++.+.+
T Consensus 211 ~lr~~~~~PvivK~v-~~~e-~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~ 288 (352)
T 3sgz_A 211 LLQSITRLPIILKGI-LTKE-DAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVL 288 (352)
T ss_dssp HHHHHCCSCEEEEEE-CSHH-HHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHH
T ss_pred HHHHhcCCCEEEEec-CcHH-HHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHH
Confidence 999999999888754 3443 36678889999999942110 01123345555543 222333444433 333444
Q ss_pred HHhhhhcceEEE
Q 025927 182 ECVLDVVDLVLI 193 (246)
Q Consensus 182 ~~~l~~vD~VLv 193 (246)
+-+.--+|.|.+
T Consensus 289 kaLalGA~aV~i 300 (352)
T 3sgz_A 289 KALALGARCIFL 300 (352)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 444444777665
No 415
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=54.64 E-value=85 Score=25.44 Aligned_cols=116 Identities=15% Similarity=0.166 Sum_probs=69.2
Q ss_pred HHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEEEE-cc--CC
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSV-HC--EQ 148 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~It~-H~--E~ 148 (246)
.++++.+.++|+|.+|++..+.. -|+ ..-.++++++|+.. +.++- .-+.+|+. ...+.++|+|+|.+ +. ..
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~-~p~-~~~~~~i~~~~~~~~~~~v~--~~~~t~~e-~~~~~~~G~d~i~~~~~g~t~ 152 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQ-RPK-ETLDELVSYIRTHAPNVEIM--ADIATVEE-AKNAARLGFDYIGTTLHGYTS 152 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSC-CSS-SCHHHHHHHHHHHCTTSEEE--EECSSHHH-HHHHHHTTCSEEECTTTTSST
T ss_pred HHHHHHHHhCCCCEEEEeeeccc-Ccc-cCHHHHHHHHHHhCCCceEE--ecCCCHHH-HHHHHHcCCCEEEeCCCcCcC
Confidence 46788888899999999987632 132 12257888888753 44332 23345554 45677899999975 21 10
Q ss_pred cc-----cccHHHHHHHHHHcCCcEEEEEcCCC-ChHHHHHhhhh-cceEEEE
Q 025927 149 SS-----TIHLHRTLNQIKDLGAKAGVVLNPAT-SLSAIECVLDV-VDLVLIM 194 (246)
Q Consensus 149 ~~-----~~~~~~~i~~Ik~~G~k~GlAlnP~T-pve~l~~~l~~-vD~VLvM 194 (246)
.. ...-.+.++++++.- .+=+...-+- ..+.+..++.. +|.|.+-
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 153 YTQGQLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp TSTTCCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 00 011124566666542 2333344454 78888888764 8887773
No 416
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=54.54 E-value=89 Score=27.23 Aligned_cols=139 Identities=13% Similarity=0.118 Sum_probs=70.2
Q ss_pred EEeeec-cCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcc--cchHHHHhcC--CCEEEEccCCccc----------
Q 025927 87 IHVDVM-DGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE--QRVPDFIKAG--ADIVSVHCEQSST---------- 151 (246)
Q Consensus 87 lHiDIM-DG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~--~~i~~~~~ag--ad~It~H~E~~~~---------- 151 (246)
-|+-++ .|.=.-+- .=.++++.+++. + +.+.|-+ |.. ..++.+.++| .+.+.+-+++...
T Consensus 143 ~~v~~sggGEPll~~-~l~~ll~~~~~~-g--~~i~l~T-NG~~~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~ 217 (342)
T 2yx0_A 143 THAAISLSGEPMLYP-YMGDLVEEFHKR-G--FTTFIVT-NGTIPERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPM 217 (342)
T ss_dssp CEEEECSSSCGGGST-THHHHHHHHHHT-T--CEEEEEE-CSCCHHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBS
T ss_pred CEEEEcCCCcccchh-hHHHHHHHHHHC-C--CcEEEEc-CCCcHHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCC
Confidence 356665 56422221 123455555543 3 3454443 332 3567778877 8877777775310
Q ss_pred -----ccHHHHHHHHHHcCCcE--EEEEcCCC---ChHHHHHhhhh--cceEEEEeecC-CCCCCc---ccHHHHHHHHH
Q 025927 152 -----IHLHRTLNQIKDLGAKA--GVVLNPAT---SLSAIECVLDV--VDLVLIMSVNP-GFGGQS---FIESQVKKISD 215 (246)
Q Consensus 152 -----~~~~~~i~~Ik~~G~k~--GlAlnP~T---pve~l~~~l~~--vD~VLvMsV~P-GfgGQ~---F~~~~l~KI~~ 215 (246)
+...+.++.+++.|.++ ...+.|+. .++.+..++.. +|.|-+....| |.+..+ +.+...+.+.+
T Consensus 218 ~~~~~~~~~~~i~~l~~~g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~ 297 (342)
T 2yx0_A 218 IPDGWERILRFLELMRDLPTRTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIRE 297 (342)
T ss_dssp SSCHHHHHHHHHHHHTTCSSEEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHH
Confidence 11334455566677654 55677753 35666666654 67777766665 443322 22333455666
Q ss_pred HHHHHHhcCCCCeEE
Q 025927 216 LRRMCLEKGVNPWIE 230 (246)
Q Consensus 216 lr~l~~~~~~~~~I~ 230 (246)
+.+.+.+.-.++.|.
T Consensus 298 ~~~~l~~~l~~~~I~ 312 (342)
T 2yx0_A 298 FAEALVKHLPGYHIE 312 (342)
T ss_dssp HHHHHHTTCTTEEEE
T ss_pred HHHHHHHhccCCcee
Confidence 655554432234553
No 417
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=54.46 E-value=1.1e+02 Score=26.90 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=61.3
Q ss_pred HHHHHHcCCCEE--EeeeccCcccC--CCCCC--HHHHhhcccCCCCCeeEEEe--ccCcccchHHHHhcCCCEEEE--c
Q 025927 76 VKAVELAGCDWI--HVDVMDGRFVP--NITIG--PLVVDALRPVTDLPLDVHLM--IVEPEQRVPDFIKAGADIVSV--H 145 (246)
Q Consensus 76 i~~l~~~g~d~l--HiDIMDG~FVp--N~tfg--p~~I~~ir~~t~~plDvHLM--V~~P~~~i~~~~~agad~It~--H 145 (246)
.+.++.+|+|.+ |++..--.+-| +-.|. .+.++++|+.+++|+-+=+. ..++ ..+..+.++|+|.|++ |
T Consensus 133 ~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~-~~a~~a~~~Gad~I~v~~~ 211 (349)
T 1p0k_A 133 KEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSK-ASAGKLYEAGAAAVDIGGY 211 (349)
T ss_dssp HHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCH-HHHHHHHHHTCSEEEEEC-
T ss_pred HHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCH-HHHHHHHHcCCCEEEEcCC
Confidence 345677899986 44422100111 12231 36788888877888766442 0333 4467888899999998 5
Q ss_pred cC------------------CcccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhhh-hcceEEEE
Q 025927 146 CE------------------QSSTIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLD-VVDLVLIM 194 (246)
Q Consensus 146 ~E------------------~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l~-~vD~VLvM 194 (246)
-- ..........|..+++.--++=|..+-+ ..-+++.+++. -+|.|.+=
T Consensus 212 ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 212 GGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp --------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 11 0001112334556665311233444444 33455555443 48988873
No 418
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=54.23 E-value=1.4e+02 Score=28.08 Aligned_cols=158 Identities=13% Similarity=0.142 Sum_probs=88.9
Q ss_pred cEEeeeecccC-----hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCC------H----HHHhhccc----------
Q 025927 58 IIVSPSILSAN-----FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG------P----LVVDALRP---------- 112 (246)
Q Consensus 58 ~~IsPSIl~aD-----~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfg------p----~~I~~ir~---------- 112 (246)
..+.+||..-+ +..+.+.++++.+ ++|+|=+.+ -+||.. | + ++++++++
T Consensus 180 ~~vgvni~~~~~~~~~~~dy~~~a~~l~~-~aD~ieiNi----scPnt~-Glr~lq~~~~l~~il~~v~~~~~~~~~~~~ 253 (443)
T 1tv5_A 180 HIVGVSIGKNKDTVNIVDDLKYCINKIGR-YADYIAINV----SSPNTP-GLRDNQEAGKLKNIILSVKEEIDNLEKNNI 253 (443)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEEC----CCTTST-TGGGGGSHHHHHHHHHHHHHHHHHHC----
T ss_pred ceEEEEecCcccchHHHHHHHHHHHHHhc-CCCEEEEec----cCCCCc-ccccccCHHHHHHHHHHHHHHHhhhcccCc
Confidence 46889998776 6677777777765 699988877 457753 2 1 22333332
Q ss_pred ----------------------------------------CCCCC-eeEEEecc----CcccchHHHHhcCCCEEEEccC
Q 025927 113 ----------------------------------------VTDLP-LDVHLMIV----EPEQRVPDFIKAGADIVSVHCE 147 (246)
Q Consensus 113 ----------------------------------------~t~~p-lDvHLMV~----~P~~~i~~~~~agad~It~H~E 147 (246)
.+++| +-+=+-.. +.....+.+.++|+|.|++|--
T Consensus 254 ~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~nt 333 (443)
T 1tv5_A 254 MNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNT 333 (443)
T ss_dssp ----------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECC
Confidence 13567 66665432 2223466677899999999963
Q ss_pred Ccccc-----------------c--HHHHHHHHHHcC-CcEEEEEcCC-CChHHHHHhhh-hcceEEEEeecCCCCCCcc
Q 025927 148 QSSTI-----------------H--LHRTLNQIKDLG-AKAGVVLNPA-TSLSAIECVLD-VVDLVLIMSVNPGFGGQSF 205 (246)
Q Consensus 148 ~~~~~-----------------~--~~~~i~~Ik~~G-~k~GlAlnP~-Tpve~l~~~l~-~vD~VLvMsV~PGfgGQ~F 205 (246)
..... . ..+++..+++.= -++=|.-+-+ ++.++..++|. -+|.|.+=+--- ++
T Consensus 334 t~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall-~~---- 408 (443)
T 1tv5_A 334 TTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLV-FN---- 408 (443)
T ss_dssp BSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHH-HH----
T ss_pred CcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHH-hc----
Confidence 21000 0 236777787652 1222332223 55555556554 488887632200 11
Q ss_pred cHHHHHHHHH-HHHHHHhcCCC
Q 025927 206 IESQVKKISD-LRRMCLEKGVN 226 (246)
Q Consensus 206 ~~~~l~KI~~-lr~l~~~~~~~ 226 (246)
.|..++||++ +++++.+.|+.
T Consensus 409 gP~l~~~i~~~l~~~l~~~G~~ 430 (443)
T 1tv5_A 409 GMKSAVQIKRELNHLLYQRGYY 430 (443)
T ss_dssp GGGHHHHHHHHHHHHHHHHTCS
T ss_pred ChHHHHHHHHHHHHHHHHhCCC
Confidence 3456666654 55666666653
No 419
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=54.17 E-value=16 Score=33.61 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEEEE
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
....+.++++.++|+|.+-+|.--|+- ..-.+.|++||+.+ +.|+-+= -|..|+. ...+.++|+|.|.+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~----~~~~e~I~~ir~~~~~~~Vi~G-~V~T~e~-A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA----KYVGKTLKSLRQLLGSRCIMAG-NVATYAG-ADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS----HHHHHHHHHHHHHHTTCEEEEE-EECSHHH-HHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc----HhHHHHHHHHHHhcCCCeEEEc-CcCCHHH-HHHHHHcCCCEEEE
Confidence 455678999999999999999877742 11146788888753 5554431 2345554 56788999999987
No 420
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=54.13 E-value=67 Score=32.24 Aligned_cols=144 Identities=16% Similarity=0.200 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCcc-cCCCCCCH-----HHHhhcccCC-----CCCeeEEEeccCcccchHHHHhcCC
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRF-VPNITIGP-----LVVDALRPVT-----DLPLDVHLMIVEPEQRVPDFIKAGA 139 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~F-VpN~tfgp-----~~I~~ir~~t-----~~plDvHLMV~~P~~~i~~~~~aga 139 (246)
.+.++++.|.++|++.|.+|=-.... .|--..++ ..++.++..+ +..+.+|+.=.+-...++.+.+.++
T Consensus 571 a~~~ei~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~~~~~i~~HiC~G~~~~i~~~L~~~~a 650 (755)
T 2nq5_A 571 AIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKFDEIIDAIRALDA 650 (755)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCTTSEEEEEECCSCCSTTHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeccCCcHHHHHHHHhCCC
Confidence 56688999999999999999764332 12112221 2234444322 2345677664454566788899999
Q ss_pred CEEEEccCCcccccHHHHHHHHHHc--CCcEEEEEcC-CCC----hHHHHHhhhh-cceE--EEEeecC--CCCCCcccH
Q 025927 140 DIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNP-ATS----LSAIECVLDV-VDLV--LIMSVNP--GFGGQSFIE 207 (246)
Q Consensus 140 d~It~H~E~~~~~~~~~~i~~Ik~~--G~k~GlAlnP-~Tp----ve~l~~~l~~-vD~V--LvMsV~P--GfgGQ~F~~ 207 (246)
|.+++-.. ..+ .+.+..+.+. |..+|+-+=+ .++ .+.+..-+.. +++| --+.+.| ||++- =-+
T Consensus 651 D~islE~~---rsd-~e~L~~~~~~~~~~~v~lGvvd~~s~~ve~~eeV~~ri~~a~~~v~~e~l~lsPdCGl~t~-t~~ 725 (755)
T 2nq5_A 651 DVISIETS---RSH-GDIIESFETAVYPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDCGLKTR-QEP 725 (755)
T ss_dssp SEEEC-----------------------CEEEEECSCTTSSCCCCHHHHHHHHHGGGGSSCGGGEEEECSSCCTTS-CHH
T ss_pred CEEEEecC---CCC-HHHHHHHHhccCCCeEEEeeccCccCCCCCHHHHHHHHHHHHHhCCcccEEEeCCCCCCCC-CHH
Confidence 99997632 223 3556666653 5556665432 222 2333333222 2211 1134557 55543 234
Q ss_pred HHHHHHHHHHHH
Q 025927 208 SQVKKISDLRRM 219 (246)
Q Consensus 208 ~~l~KI~~lr~l 219 (246)
++.+|++.+.+.
T Consensus 726 e~~~kL~~mvea 737 (755)
T 2nq5_A 726 ETIAALKVLVAA 737 (755)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 456677766553
No 421
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=54.07 E-value=55 Score=29.07 Aligned_cols=123 Identities=16% Similarity=0.160 Sum_probs=76.3
Q ss_pred Eeeeecc--cChhhHHHHHHHHHHcCCCEEEe---eecc--CcccC---CCCCCHHHHhhcccCCCCCeeEEEeccCcc-
Q 025927 60 VSPSILS--ANFAKLGEQVKAVELAGCDWIHV---DVMD--GRFVP---NITIGPLVVDALRPVTDLPLDVHLMIVEPE- 128 (246)
Q Consensus 60 IsPSIl~--aD~~~l~~~i~~l~~~g~d~lHi---DIMD--G~FVp---N~tfgp~~I~~ir~~t~~plDvHLMV~~P~- 128 (246)
..|-+-| .|...+.+.+..+.+.|++.+=. |--. |.|.+ .+....+.|+.||+..+-.+.+-. ..+|+
T Consensus 74 ~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igv-A~yPE~ 152 (310)
T 3apt_A 74 PLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGG-AAYPEG 152 (310)
T ss_dssp BCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEE-EECTTC
T ss_pred eEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEE-EeCCCc
Confidence 3444444 45556778999999999997654 4322 33333 244577888888876332244444 23443
Q ss_pred --------cchHHH---HhcCCCEEEEccCCcccccHHHHHHHHHHcC--CcEEEEEcCCCChHHHHHh
Q 025927 129 --------QRVPDF---IKAGADIVSVHCEQSSTIHLHRTLNQIKDLG--AKAGVVLNPATSLSAIECV 184 (246)
Q Consensus 129 --------~~i~~~---~~agad~It~H~E~~~~~~~~~~i~~Ik~~G--~k~GlAlnP~Tpve~l~~~ 184 (246)
.-++.| +++|||++.-++=- ..+...++++++|+.| +.+=..|-|=|+...+..+
T Consensus 153 Hp~~~~~~~d~~~Lk~Kv~aGAdf~iTQ~ff-D~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 220 (310)
T 3apt_A 153 HPESESLEADLRHFKAKVEAGLDFAITQLFF-NNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRF 220 (310)
T ss_dssp CTTSSCHHHHHHHHHHHHHHHCSEEEECCCS-CHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEecccC-CHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHH
Confidence 223333 56899988877421 2356788999999988 3444455677888777665
No 422
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=53.91 E-value=41 Score=30.39 Aligned_cols=145 Identities=14% Similarity=0.120 Sum_probs=73.6
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCC--CCCC------HHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcC
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN--ITIG------PLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAG 138 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN--~tfg------p~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~ag 138 (246)
|....-+..+++.+.|+|.|=+=-.-. =|+ ++-. ...|++|++.+ +.|+. +-+.+|+. ++.-.++|
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeST--rPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpIS--IDT~~~~V-aeaAl~aG 137 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKA--GPGERVDVDTEITRLVPFIEWLRGAYPDQLIS--VDTWRAQV-AKAACAAG 137 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHSTTCEEE--EECSCHHH-HHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC--CCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEE--EeCCCHHH-HHHHHHhC
Confidence 556666778888889999875543211 121 1111 12356666543 55532 34556654 45556779
Q ss_pred CCEEE-EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC-Ch--------------------HHHHHhhhh-----cc--
Q 025927 139 ADIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT-SL--------------------SAIECVLDV-----VD-- 189 (246)
Q Consensus 139 ad~It-~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T-pv--------------------e~l~~~l~~-----vD-- 189 (246)
+++|- +-.+. . .+++..++++|+.+-+.=+.++ |- +.+++.++. ++
T Consensus 138 a~iINDVsg~~--d---~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~ 212 (318)
T 2vp8_A 138 ADLINDTWGGV--D---PAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVARE 212 (318)
T ss_dssp CCEEEETTSSS--S---TTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred CCEEEECCCCC--c---hHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChh
Confidence 99774 22221 1 2467777888876655544333 21 111111111 21
Q ss_pred eEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 025927 190 LVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVN 226 (246)
Q Consensus 190 ~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~ 226 (246)
. .-++||+|=-+=.+..++-++.++++. +.|+.
T Consensus 213 ~---IilDPG~GF~Kt~~~nl~ll~~l~~l~-~lg~P 245 (318)
T 2vp8_A 213 K---VLIDPAHDFGKNTFHGLLLLRHVADLV-MTGWP 245 (318)
T ss_dssp G---EEEETTTTCCTTSHHHHHHHHTHHHHH-TTSSC
T ss_pred h---EEEcCCCCcccCHHHHHHHHHHHHHHH-hCCCC
Confidence 1 235898764555566677777777665 34544
No 423
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=53.54 E-value=51 Score=30.38 Aligned_cols=122 Identities=13% Similarity=0.040 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHcCCCEEEeeeccCccc-----CC---------------CCCCHHHHhhcccCCC-CCeeEEEeccC---
Q 025927 71 KLGEQVKAVELAGCDWIHVDVMDGRFV-----PN---------------ITIGPLVVDALRPVTD-LPLDVHLMIVE--- 126 (246)
Q Consensus 71 ~l~~~i~~l~~~g~d~lHiDIMDG~FV-----pN---------------~tfgp~~I~~ir~~t~-~plDvHLMV~~--- 126 (246)
.+.+..++++++|.|.+-+..--|... |+ .-|--++|+++|+..+ .|+-+-|=..+
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 555666777889999987776433111 22 2344678888888543 36666654321
Q ss_pred ----------cccchHHHHhcC------CCEEEEccCCc-----cc------c-cHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 127 ----------PEQRVPDFIKAG------ADIVSVHCEQS-----ST------I-HLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 127 ----------P~~~i~~~~~ag------ad~It~H~E~~-----~~------~-~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
...+++.+.++| +|+|++|.-.. .. . ...+++..+|+.= +.=|..+-+...
T Consensus 252 g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~-~iPvi~~G~i~~ 330 (402)
T 2hsa_B 252 DAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY-QGTFICSGGYTR 330 (402)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC-SSCEEEESSCCH
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC-CCCEEEeCCCCH
Confidence 124456667789 99999984211 00 0 1345677777642 223555555567
Q ss_pred HHHHHhhhh--cceEEE
Q 025927 179 SAIECVLDV--VDLVLI 193 (246)
Q Consensus 179 e~l~~~l~~--vD~VLv 193 (246)
+..+.+|.. +|+|.+
T Consensus 331 ~~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 331 ELGIEAVAQGDADLVSY 347 (402)
T ss_dssp HHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHCCCCceeee
Confidence 888888875 898876
No 424
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=53.42 E-value=83 Score=29.02 Aligned_cols=121 Identities=13% Similarity=0.167 Sum_probs=63.5
Q ss_pred HHHhhcccCCCCCeeEEEecc--CcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCC------
Q 025927 105 LVVDALRPVTDLPLDVHLMIV--EPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT------ 176 (246)
Q Consensus 105 ~~I~~ir~~t~~plDvHLMV~--~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T------ 176 (246)
..+..+++. +++-+..++.. .+...++..++.|+..++++-+ .++.++-+. ....+++|-+||+.
T Consensus 93 ~E~~~~~~a-G~~~~~iv~~g~~k~~~ei~~a~~~gv~~~~vds~----~el~~l~~~--~~~~~v~lRin~g~~~~~~~ 165 (448)
T 3btn_A 93 NEMALVQEL-GVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNE----IELKKIARN--HPNAKVLLHIATEDNIGGED 165 (448)
T ss_dssp HHHHHHHHT-TCCGGGEEECCSSCCHHHHHHHHHHTCCEEEECSH----HHHHHHHHH--CTTCEEEEEBCCCC------
T ss_pred HHHHHHHHc-CCChhhEEEcCCCCCHHHHHHHHHcCCCEEEeCCH----HHHHHHHHh--CCCCeEEEEEecCCCccCCC
Confidence 345555543 55444444432 3456677778888876776543 334333322 12578899999983
Q ss_pred -------ChHHHHHhhh-----hcceEEEEeecCCCCCCcccH----HHHHHHHHHHHHHHhcCCCCe-EEEeCCC
Q 025927 177 -------SLSAIECVLD-----VVDLVLIMSVNPGFGGQSFIE----SQVKKISDLRRMCLEKGVNPW-IEVDGGV 235 (246)
Q Consensus 177 -------pve~l~~~l~-----~vD~VLvMsV~PGfgGQ~F~~----~~l~KI~~lr~l~~~~~~~~~-I~VDGGI 235 (246)
+.+.+..++. .++++-+++ - +|.|.+.+ ..+++.+++.++..+.|.++. |-+=||.
T Consensus 166 ~~~RfG~~~~~~~~~~~~~~~~~l~~~Gl~~-H--~gs~~~d~~~~~~~~~~~~~~~~~~~~~G~~~~~ldiGGG~ 238 (448)
T 3btn_A 166 GNMKFGTTLKNCRHLLECAKELDVQIIGVKF-H--VSSACKEYQVYVHALSDARCVFDMAGEFGFTMNMLDIGGGF 238 (448)
T ss_dssp --CCCCBCHHHHHHHHHHHHHHTCEEEEEEC-C--CCTTCCCTTHHHHHHHHHHHHHHHHHHTTCCCCEEECCSCC
T ss_pred CCCcCCCCHHHHHHHHHHHHhCCCCEEEEEE-E--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEeCCCc
Confidence 2344444443 233333332 2 34444332 345555566666667787665 3334565
No 425
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=53.40 E-value=20 Score=34.05 Aligned_cols=101 Identities=19% Similarity=0.249 Sum_probs=63.0
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchH--HHHhcCCCEEEEc
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVP--DFIKAGADIVSVH 145 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~--~~~~agad~It~H 145 (246)
|+..+.+.++++.++|+++|=+==|=|.-.|.-. .+.++++++..+.++.+|.=-..=..... .-+++||++|--=
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v--~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~t 233 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAGILTPYAA--EELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTA 233 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHH--HHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHH--HHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEEEEe
Confidence 6667777788888888888766556666655432 23566667656788888874433222222 3366899876543
Q ss_pred cC----CcccccHHHHHHHHHHcCCcEEE
Q 025927 146 CE----QSSTIHLHRTLNQIKDLGAKAGV 170 (246)
Q Consensus 146 ~E----~~~~~~~~~~i~~Ik~~G~k~Gl 170 (246)
+- -+.....+.++..++..|...|+
T Consensus 234 i~g~gertGN~~lE~lv~~L~~~g~~tgi 262 (464)
T 2nx9_A 234 ISSMSGTYGHPATESLVATLQGTGYDTGL 262 (464)
T ss_dssp CGGGCSTTSCCBHHHHHHHHTTSTTCCCC
T ss_pred ccccCCCCcCHHHHHHHHHHHhcCCCccc
Confidence 32 11234567777777777776554
No 426
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=53.39 E-value=1.2e+02 Score=27.13 Aligned_cols=126 Identities=11% Similarity=0.062 Sum_probs=74.1
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=| ...++..+.-+++ ++..+++ |---|.
T Consensus 51 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG---E~~~Ls~eEr~~v--------------------i~~~ve~~~grvpVi 107 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTG---IYMYLTREERRRA--------------------IEAAATILRGRRTLM 107 (332)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTT---TGGGSCHHHHHHH--------------------HHHHHHHHTTSSEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc---ChhhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 57888999999999999998764333333 3345555444333 2222221 212344
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|+=+++==.|+..|..+.++++.++.
T Consensus 108 aGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 185 (332)
T 2r8w_A 108 AGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLA 185 (332)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 454432344555666667778888888877763 223333 23344554344444588888888888887764
No 427
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=53.37 E-value=33 Score=28.66 Aligned_cols=42 Identities=14% Similarity=-0.024 Sum_probs=26.4
Q ss_pred cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEE
Q 025927 127 PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVV 171 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlA 171 (246)
++..++..+++|.+.|-+.... . ++.++.+.+++.|+++...
T Consensus 33 ~~~~l~~~~~~G~~~vEl~~~~--~-~~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 33 LQQLLSDIVVAGFQGTEVGGFF--P-GPEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp HHHHHHHHHHHTCCEECCCTTC--C-CHHHHHHHHHHTTCEECEE
T ss_pred HHHHHHHHHHhCCCEEEecCCC--C-CHHHHHHHHHHCCCeEEEE
Confidence 4456667777787777665221 2 5666777777888776443
No 428
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=53.19 E-value=1.2e+02 Score=27.22 Aligned_cols=123 Identities=13% Similarity=0.064 Sum_probs=75.3
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H 145 (246)
..|+..+++.++.+.+.|++.|=+==.=|.| .++..+.-+++-+. .-.|---|..+
T Consensus 43 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~---~~Ls~eEr~~vi~~---------------------~~~grvpViaG 98 (344)
T 2hmc_A 43 TPDFDALVRKGKELIADGMSAVVYCGSMGDW---PLLTDEQRMEGVER---------------------LVKAGIPVIVG 98 (344)
T ss_dssp SBCHHHHHHHHHHHHHTTCCCEEESSGGGTG---GGSCHHHHHHHHHH---------------------HHHTTCCEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccCcCh---hhCCHHHHHHHHHH---------------------HhCCCCcEEEe
Confidence 5889999999999999998876443333333 45665544443221 11122234455
Q ss_pred cCCcccccHHHHHHHHHHcCCcEEEEEcCCC----ChHHHH----Hhhh-hcceEEEEeecCCCCCCcccHHHHHHH
Q 025927 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT----SLSAIE----CVLD-VVDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 146 ~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T----pve~l~----~~l~-~vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+ .+|+=+++==.| ..|..+.++++.++
T Consensus 99 vg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 99 TGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-YYGFATRADLFFAL 174 (344)
T ss_dssp CCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-GGTBCCCHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-ccCCCcCHHHHHHH
Confidence 5433345556677777888999888888863 123333 3344 445533343457 88999999998877
No 429
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=53.17 E-value=16 Score=34.13 Aligned_cols=69 Identities=30% Similarity=0.378 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEEEE
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
....+.++.+.++|+|.+=+|...|++ ..-.+.++++|+.+ ++|+-+- -+..++. ...+.++|+|.|.+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~----~~~~e~i~~i~~~~p~~pvi~g-~~~t~e~-a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHS----RRVIETLEMIKADYPDLPVVAG-NVATPEG-TEALIKAGADAVKV 305 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSS----HHHHHHHHHHHHHCTTSCEEEE-EECSHHH-HHHHHHTTCSEEEE
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCch----HHHHHHHHHHHHHCCCceEEeC-CcCCHHH-HHHHHHcCCCEEEE
Confidence 445678899999999999998887754 23357888888866 6776442 2344443 46788999999988
No 430
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=52.73 E-value=78 Score=27.56 Aligned_cols=127 Identities=15% Similarity=0.083 Sum_probs=70.3
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+= |+--...++..+.-+++- +..++. |---|.
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~---GttGE~~~Ls~~Er~~v~--------------------~~~~~~~~gr~pvi 73 (292)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVPC---GTTGESPTLSKSEHEQVV--------------------EITIKTANGRVPVI 73 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEETT---SGGGTGGGSCHHHHHHHH--------------------HHHHHHHTTSSCBE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEC---ccccChhhCCHHHHHHHH--------------------HHHHHHhCCCCcEE
Confidence 5899999999999999998876332 332233455554443331 111111 111233
Q ss_pred EccCCcccccHHHHHHHHHHcCCcEEEEEcCCC---ChHHHH----HhhhhcceEEEEeecCCCCCCcccHHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIE----CVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~T---pve~l~----~~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~~ 215 (246)
.+.=+.++.+..+..+..++.|..+-+++.|.. +-+.+. .+.+.+|.=+++==.|+..|..+.++++.++.+
T Consensus 74 aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 74 AGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred EecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 444322234445556666677777777777742 223322 233444543333345777777888887776653
No 431
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp}
Probab=52.25 E-value=23 Score=32.38 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=45.6
Q ss_pred hHHHHhcCCCEEEEccCCcc----------c---ccHHHHHHHHHH---cCCcEEEEEcCCCCh----HHHHHhhhhcce
Q 025927 131 VPDFIKAGADIVSVHCEQSS----------T---IHLHRTLNQIKD---LGAKAGVVLNPATSL----SAIECVLDVVDL 190 (246)
Q Consensus 131 i~~~~~agad~It~H~E~~~----------~---~~~~~~i~~Ik~---~G~k~GlAlnP~Tpv----e~l~~~l~~vD~ 190 (246)
++.+.+.|-|-|-+.+|--. . .+...+++.+|+ .+...-+|+.+.... -.+..+.+.+|+
T Consensus 140 ~~~~~~~gfDGiDiDwE~p~~~~~~~~~~~~~d~~~~~~ll~eLr~~l~~~~~Ls~a~~~~~~~~~~~~d~~~l~~~~D~ 219 (420)
T 3qok_A 140 QKIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRDNFTALLKSLREAVGEQKLVTIAVGANAESPKSWVDVKAVAPVLNY 219 (420)
T ss_dssp HHHHHHHTCSEEEEECSCTTTHHHHTSCCCTTHHHHHHHHHHHHHHHHCSSSEEEEEECSCTHHHHHTSCHHHHGGGCSE
T ss_pred HHHHHhcCCCceEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEecCccccccccccHHHHHhhCCE
Confidence 33445578999999999321 1 235566666664 467788888776432 245667788999
Q ss_pred EEEEeec
Q 025927 191 VLIMSVN 197 (246)
Q Consensus 191 VLvMsV~ 197 (246)
|.||+=+
T Consensus 220 inlMtYD 226 (420)
T 3qok_A 220 INLMTYD 226 (420)
T ss_dssp EEECCCC
T ss_pred EEEeccc
Confidence 9999976
No 432
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=51.97 E-value=24 Score=32.00 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=52.0
Q ss_pred CcEEeeeecc---cChhhHHHHHHHHHHcCCCEEEeeeccCcccCC-----CCCCHHHHhhcccCCCCCeeEEEeccCcc
Q 025927 57 DIIVSPSILS---ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN-----ITIGPLVVDALRPVTDLPLDVHLMIVEPE 128 (246)
Q Consensus 57 ~~~IsPSIl~---aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN-----~tfgp~~I~~ir~~t~~plDvHLMV~~P~ 128 (246)
-++|+|.=+. .+.....+-++.|+++ +|+||+. .|.+.+. -.+..+.++.+|+..++|+-+==-+.+|+
T Consensus 214 ~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs--~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e 290 (343)
T 3kru_A 214 FVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVS--SGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQE 290 (343)
T ss_dssp EEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHH
T ss_pred EEEeechhhhccCccHHHHHHHHHHhhcc-ccEEecc--CCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHH
Confidence 4678885332 2345566677888999 9999985 2333321 12345678888887677753322234555
Q ss_pred cchHHHHhcC-CCEEEEc
Q 025927 129 QRVPDFIKAG-ADIVSVH 145 (246)
Q Consensus 129 ~~i~~~~~ag-ad~It~H 145 (246)
.. +.+++.| +|.|.+=
T Consensus 291 ~A-e~~l~~G~aD~V~iG 307 (343)
T 3kru_A 291 LA-EEILSNERADLVALG 307 (343)
T ss_dssp HH-HHHHHTTSCSEEEES
T ss_pred HH-HHHHhchhhHHHHHH
Confidence 54 4555566 9999884
No 433
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=51.97 E-value=55 Score=29.25 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=58.2
Q ss_pred eeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHH-------HHhhcccCCCCCeeEEEecc--Ccccch
Q 025927 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL-------VVDALRPVTDLPLDVHLMIV--EPEQRV 131 (246)
Q Consensus 61 sPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~-------~I~~ir~~t~~plDvHLMV~--~P~~~i 131 (246)
+-.+...|+....+..+++.+.|+|+|=+=. +...++ ..+ .|+++++.++.| |++. +|+..
T Consensus 28 ~~~~~~~~~~~a~~~A~~~v~~GAdiIDIg~-g~~~v~----~~eem~rvv~~i~~~~~~~~vp----isIDT~~~~V~- 97 (300)
T 3k13_A 28 LRLVNEKKYDEALSIARQQVEDGALVIDVNM-DDGLLD----ARTEMTTFLNLIMSEPEIARVP----VMIDSSKWEVI- 97 (300)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCSEEEEEC-CCTTSC----HHHHHHHHHHHHHTCHHHHTSC----EEEECSCHHHH-
T ss_pred HHHHhcCCHHHHHHHHHHHHHCCCCEEEECC-CCCCCC----HHHHHHHHHHHHHHhhhcCCCe----EEEeCCCHHHH-
Confidence 3355667888888888888899999986654 211121 112 233333334555 4544 55543
Q ss_pred HHHHh--cCCCEE-EEccCCcccccHHHHHHHHHHcCCcEEEE
Q 025927 132 PDFIK--AGADIV-SVHCEQSSTIHLHRTLNQIKDLGAKAGVV 171 (246)
Q Consensus 132 ~~~~~--agad~I-t~H~E~~~~~~~~~~i~~Ik~~G~k~GlA 171 (246)
+.-.+ +|+++| .+-.+. ..+.+.+++..++++|+.+-+.
T Consensus 98 eaaL~~~~Ga~iINdIs~~~-~d~~~~~~~~l~a~~ga~vV~m 139 (300)
T 3k13_A 98 EAGLKCLQGKSIVNSISLKE-GEEVFLEHARIIKQYGAATVVM 139 (300)
T ss_dssp HHHHHHCSSCCEEEEECSTT-CHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHhcCCCCEEEeCCccc-CChhHHHHHHHHHHhCCeEEEE
Confidence 44445 699876 344442 0123457888999999865443
No 434
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=51.77 E-value=95 Score=25.17 Aligned_cols=102 Identities=16% Similarity=0.067 Sum_probs=59.1
Q ss_pred CcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEE-EEEcCC-----------C------ChHHHHHhhhh
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAG-VVLNPA-----------T------SLSAIECVLDV 187 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~G-lAlnP~-----------T------pve~l~~~l~~ 187 (246)
.++..++...++|.+.|-+.... ..++.++.+.+++.|+++. +...+. . .++.++..++.
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~ 93 (260)
T 1k77_A 16 PFIERFAAARKAGFDAVEFLFPY--NYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEY 93 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCCT--TSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEecCCC--CCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHH
Confidence 45567778888899988877532 2356777888889999876 332110 0 12344444432
Q ss_pred -----cceEEEEeecCCCCCCcc-----cHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 025927 188 -----VDLVLIMSVNPGFGGQSF-----IESQVKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 188 -----vD~VLvMsV~PGfgGQ~F-----~~~~l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
++.|. +.||.....+ .....+.++++-++.++.|..+-+|-.
T Consensus 94 a~~lG~~~v~---~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 145 (260)
T 1k77_A 94 ALALNCEQVH---VMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEAL 145 (260)
T ss_dssp HHHTTCSEEE---CCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCC
T ss_pred HHHcCCCEEE---ECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 34443 3466532112 234566666777777777765555554
No 435
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=51.74 E-value=62 Score=28.56 Aligned_cols=106 Identities=16% Similarity=0.096 Sum_probs=58.6
Q ss_pred cccchHHHHhcCCCEEEEccCCc------cccc---HHHHHHHHHHcCCcEEEE-EcCCCChHHHHHhhhh-cceEEEEe
Q 025927 127 PEQRVPDFIKAGADIVSVHCEQS------STIH---LHRTLNQIKDLGAKAGVV-LNPATSLSAIECVLDV-VDLVLIMS 195 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~E~~------~~~~---~~~~i~~Ik~~G~k~GlA-lnP~Tpve~l~~~l~~-vD~VLvMs 195 (246)
|+...+....++++.+.+|.... ...+ +.+.++++|+.++.+.+= +.++.+.+....+.+. +|.|.|=.
T Consensus 134 ~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~ 213 (332)
T 1vcf_A 134 RDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVAG 213 (332)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCC
T ss_pred hHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCC
Confidence 44444433345788888886421 0111 357788888756666665 5566777777665543 89887732
Q ss_pred ecCCC--------CC---------CcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 196 VNPGF--------GG---------QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 196 V~PGf--------gG---------Q~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
- .|- .. ...-+.+++-|.++++..+ ++.|..||||+.
T Consensus 214 ~-ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~----~ipvia~GGI~~ 267 (332)
T 1vcf_A 214 A-GGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP----HLPLVASGGVYT 267 (332)
T ss_dssp B-TSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS----SSCEEEESSCCS
T ss_pred C-CCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC----CCeEEEECCCCC
Confidence 1 110 00 0112234444555554432 367999999964
No 436
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=51.64 E-value=18 Score=31.84 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=20.9
Q ss_pred CCCeeEEEeccCc--c---cchHHHHhcCCCEEEEc
Q 025927 115 DLPLDVHLMIVEP--E---QRVPDFIKAGADIVSVH 145 (246)
Q Consensus 115 ~~plDvHLMV~~P--~---~~i~~~~~agad~It~H 145 (246)
...+-.++|.-+| + ++++.+.++|+|.|-+-
T Consensus 17 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElg 52 (267)
T 3vnd_A 17 KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELG 52 (267)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 4556777777777 3 34556667788877776
No 437
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=51.64 E-value=19 Score=35.35 Aligned_cols=103 Identities=11% Similarity=0.095 Sum_probs=70.7
Q ss_pred CCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCC-cEEEEEcCCCCh--HHHHHhhhhcceEE
Q 025927 116 LPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGA-KAGVVLNPATSL--SAIECVLDVVDLVL 192 (246)
Q Consensus 116 ~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~-k~GlAlnP~Tpv--e~l~~~l~~vD~VL 192 (246)
..++.--+.++=...+....+.|+|+|.+.+=. +.+++.++.+.+++.|. .+.+..+-+++- +.+++++...|.|+
T Consensus 164 ~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~-~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgIm 242 (587)
T 2e28_A 164 VKVNLPGITEKDRADILFGIRQGIDFIAASFVR-RASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLM 242 (587)
T ss_dssp SCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCC-SHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEE
T ss_pred CcCCCCCCCcccHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEE
Confidence 334444444433345777788999999998632 24677888888888886 788888888765 77999999999999
Q ss_pred E----EeecCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 025927 193 I----MSVNPGFGGQSFIESQVKKISDLRRMCLEKGV 225 (246)
Q Consensus 193 v----MsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~ 225 (246)
| ++|+-|+ +++..-.+++-+.+.+.|.
T Consensus 243 VargDLgvei~~------~~v~~~qk~ii~~~~~~gk 273 (587)
T 2e28_A 243 VARGDLGVEIPA------EEVPLIQKLLIKKSNMLGK 273 (587)
T ss_dssp EEHHHHHHHSCG------GGHHHHHHHHHHHHHHHTC
T ss_pred EcCchhhhhcCH------HHHHHHHHHHHHHHHHcCC
Confidence 8 6676664 4444444555555555554
No 438
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=51.38 E-value=1e+02 Score=27.43 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=45.4
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCC-------C-HHHHhhcc---cC-CCCCeeEEEeccC--------
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITI-------G-PLVVDALR---PV-TDLPLDVHLMIVE-------- 126 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tf-------g-p~~I~~ir---~~-t~~plDvHLMV~~-------- 126 (246)
.+..+..+.+++++++|+.-+| +-|+.+.+.-+. . .++++.|+ .- .+- |.-++...
T Consensus 95 g~~~~v~~~v~~l~~aGaagv~--iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~--~~~I~ARTDa~~~~gl 170 (298)
T 3eoo_A 95 GGAFNIARTIRSFIKAGVGAVH--LEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDE--TFVIMARTDAAAAEGI 170 (298)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEE--EECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSST--TSEEEEEECTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEE--ECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCC--CeEEEEeehhhhhcCH
Confidence 4777888999999999999999 567776443221 1 23344442 11 111 22122111
Q ss_pred --cccchHHHHhcCCCEEEEcc
Q 025927 127 --PEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 127 --P~~~i~~~~~agad~It~H~ 146 (246)
-.+-...|.++|||.|.+|.
T Consensus 171 deai~Ra~ay~~AGAD~if~~~ 192 (298)
T 3eoo_A 171 DAAIERAIAYVEAGADMIFPEA 192 (298)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhhHhcCCCEEEeCC
Confidence 11224467889999999874
No 439
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=51.08 E-value=1.4e+02 Score=26.79 Aligned_cols=154 Identities=15% Similarity=0.143 Sum_probs=94.5
Q ss_pred HHHHHHcCCCEEEeeeccCccc----CC----CCCC------HHHHhhccc-CCCCCeeEEEeccCccc----chHHHHh
Q 025927 76 VKAVELAGCDWIHVDVMDGRFV----PN----ITIG------PLVVDALRP-VTDLPLDVHLMIVEPEQ----RVPDFIK 136 (246)
Q Consensus 76 i~~l~~~g~d~lHiDIMDG~FV----pN----~tfg------p~~I~~ir~-~t~~plDvHLMV~~P~~----~i~~~~~ 136 (246)
.|..++.|+|+|=+ ---|.|= +. +.|| .++-+++-+ ..+.|+-+-+-..+|.+ +++.+.+
T Consensus 41 Ak~~e~gGaDlii~-ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~ 119 (286)
T 2p10_A 41 AKSEEAGDIDLIVI-YNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKE 119 (286)
T ss_dssp HHHHHHTTCSEEEE-CHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHH
T ss_pred hHHHHhCCCCEEEE-eccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHH
Confidence 45567889998865 3333331 11 1121 122223322 23688999988899985 5567778
Q ss_pred cCCCEEEEcc--------------CCc-ccccHHHHHHHHHHcCCcE-EEEEcCCCChHHHHHhhh-hcceEEEEeecCC
Q 025927 137 AGADIVSVHC--------------EQS-STIHLHRTLNQIKDLGAKA-GVVLNPATSLSAIECVLD-VVDLVLIMSVNPG 199 (246)
Q Consensus 137 agad~It~H~--------------E~~-~~~~~~~~i~~Ik~~G~k~-GlAlnP~Tpve~l~~~l~-~vD~VLvMsV~PG 199 (246)
+|+.-+.=|+ |.- ...+..++|++.|+.|+-. .-+.| .+.-..... ..|+|.+ +||
T Consensus 120 ~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~----~eeA~amA~agpDiI~~---h~g 192 (286)
T 2p10_A 120 IGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFS----PEDAVAMAKAGADILVC---HMG 192 (286)
T ss_dssp HTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECS----HHHHHHHHHHTCSEEEE---ECS
T ss_pred hCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCC----HHHHHHHHHcCCCEEEE---CCC
Confidence 8999999999 741 2345668888899999764 33444 344444332 4777655 566
Q ss_pred C-------CCCc-ccHHHHHHHHHHHHHHHhcCCCCeEEEeC-CCCh
Q 025927 200 F-------GGQS-FIESQVKKISDLRRMCLEKGVNPWIEVDG-GVGP 237 (246)
Q Consensus 200 f-------gGQ~-F~~~~l~KI~~lr~l~~~~~~~~~I~VDG-GI~~ 237 (246)
. .|.. =.+++.++|+++.+...+-+.+..+-.-| ||+.
T Consensus 193 lT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIst 239 (286)
T 2p10_A 193 LTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIAN 239 (286)
T ss_dssp CC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCS
T ss_pred CCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCC
Confidence 2 1222 34555778888888887777777777777 7753
No 440
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A*
Probab=50.77 E-value=33 Score=31.37 Aligned_cols=44 Identities=18% Similarity=0.306 Sum_probs=31.4
Q ss_pred HHHHHHHHHH----cCCcEEEEEcCCCChH---HHHHhhhhcceEEEEeec
Q 025927 154 LHRTLNQIKD----LGAKAGVVLNPATSLS---AIECVLDVVDLVLIMSVN 197 (246)
Q Consensus 154 ~~~~i~~Ik~----~G~k~GlAlnP~Tpve---~l~~~l~~vD~VLvMsV~ 197 (246)
...+++.+|+ .|....+|+.|..... .+..+.+.+|+|.||+=+
T Consensus 173 f~~ll~eLr~~l~~~~~~Ls~av~~~~~~~~~~d~~~l~~~vD~inlMtYD 223 (420)
T 1jnd_A 173 FTALVRDVKDSLRADGFLLSLTVLPNVNSTWYFDIPALNGLVDFVNLATFD 223 (420)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEECTTCCHHHHCCHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHHHHHhhcCcEEEEEEeCCcchhhccCHHHHHhhCcEEEEeeee
Confidence 3355666664 4788999998876532 356677889999999965
No 441
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=50.73 E-value=9 Score=34.24 Aligned_cols=99 Identities=19% Similarity=0.357 Sum_probs=59.4
Q ss_pred cccchH---HHHhcCCCEEEEccCCcc------cccHHHHHHHHHHcCCcEEEEEcCCCCh------H-HHHHhhhhcce
Q 025927 127 PEQRVP---DFIKAGADIVSVHCEQSS------TIHLHRTLNQIKDLGAKAGVVLNPATSL------S-AIECVLDVVDL 190 (246)
Q Consensus 127 P~~~i~---~~~~agad~It~H~E~~~------~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv------e-~l~~~l~~vD~ 190 (246)
|+..++ .+.++||..+.+|+.... .+...+++..||+.+ .++.||+.|.. + .+..+--.-|+
T Consensus 33 peEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~--pd~ii~~TTg~~~~~~~eeR~~~~~~~Pe~ 110 (282)
T 2y7e_A 33 PEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVV--PEIIIQISTGGAVGESFDKRLAPLALKPEM 110 (282)
T ss_dssp HHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHC--TTSEEEECSSCSTTCCHHHHHGGGGGCCSE
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHC--CCeEEEeCCCCCCCCCHHHHHHHhhcCCCE
Confidence 444444 456789999999986421 112568899999862 37778877732 2 12221012344
Q ss_pred EEEEeecCC---CCCCcccHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025927 191 VLIMSVNPG---FGGQSFIESQVKKISDLRRMCLEKGVNPWIEV 231 (246)
Q Consensus 191 VLvMsV~PG---fgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~V 231 (246)
. |++.| |+..-| ..+.+.++++-+.+.++|..+++++
T Consensus 111 a---sl~~gs~Nf~~~v~-~n~~~~~~~~~~~~~e~Gv~pE~e~ 150 (282)
T 2y7e_A 111 A---TLNAGTLNFGDDIF-INHPADIIRLAEAFKQYNVVPEVEV 150 (282)
T ss_dssp E---EEECCCEEETTEEE-CCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred E---Eecccccccccccc-cCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 3 22333 222112 2566778888888888888888877
No 442
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=50.06 E-value=95 Score=27.86 Aligned_cols=30 Identities=13% Similarity=0.074 Sum_probs=24.5
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccC
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVP 98 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVp 98 (246)
.+..+..+.+++++++|+.-+| |-|+.+.+
T Consensus 100 g~~~~v~~~v~~l~~aGaagv~--iEDq~~~k 129 (307)
T 3lye_A 100 GGPIMVARTVEHYIRSGVAGAH--LEDQILTK 129 (307)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEE--ECCBCCCC
T ss_pred CCHHHHHHHHHHHHHcCCeEEE--EcCCCCCc
Confidence 4677888999999999999999 56776643
No 443
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=50.05 E-value=14 Score=33.07 Aligned_cols=108 Identities=18% Similarity=0.124 Sum_probs=64.3
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCC--CCeeEEEeccCcccchHHHHhcCCCEEEEcc
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTD--LPLDVHLMIVEPEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~--~plDvHLMV~~P~~~i~~~~~agad~It~H~ 146 (246)
+...-+..+.++++|+|.+=+.- -+| .++.++.+.+..+ +|+-+ .|++.+..-+++|.+.|..+|++..
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~----~~~----~~~~~~~i~~~~~~~~P~i~-~~~~~~~~~~~eL~~lGv~~v~~~~ 239 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHS----KKA----DPSDIEAFMKAWNNQGPVVI-VPTKYYKTPTDHFRDMGVSMVIWAN 239 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECC----CSS----SSHHHHHHHHHHTTCSCEEE-CCSTTTTSCHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHHcCCCEEEEcC----CCC----CHHHHHHHHHHcCCCCCEEE-eCCCCCCCCHHHHHHcCCcEEEECh
Confidence 45555677788899998764431 012 1445565544323 67633 3554344448899999999999986
Q ss_pred CCc--ccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 147 EQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 147 E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
-.. +..-..++.+.|++.|...++. ..-.+++++..++.
T Consensus 240 ~~~raa~~a~~~~~~~i~~~g~~~~~~-~~~~~~~e~~~~~~ 280 (295)
T 1s2w_A 240 HNLRASVSAIQQTTKQIYDDQSLVNVE-DKIVSVKEIFRLQR 280 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSTTTG-GGSCCHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccchh-hcCCCHHHHHHhcC
Confidence 532 1223567788889888654322 22246666666654
No 444
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=49.98 E-value=17 Score=36.59 Aligned_cols=101 Identities=21% Similarity=0.264 Sum_probs=66.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchH--HHHhcCCCEEEE
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVP--DFIKAGADIVSV 144 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~--~~~~agad~It~ 144 (246)
|+..+.+.+++++++|+++|-+==|=|.-.|+-.. +.|+++|+.. +.++.+|.=-..=..... .-+++||++|--
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~--~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ 336 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACT--MLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDV 336 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHH--HHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHH--HHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEe
Confidence 66778888888899999988776666766665332 4677777755 688888875443332222 235689998765
Q ss_pred ccC----CcccccHHHHHHHHHHcCCcEEE
Q 025927 145 HCE----QSSTIHLHRTLNQIKDLGAKAGV 170 (246)
Q Consensus 145 H~E----~~~~~~~~~~i~~Ik~~G~k~Gl 170 (246)
=+- ......++.++..++..|...|+
T Consensus 337 ti~GlGertGN~~lE~vv~~L~~~g~~tgi 366 (718)
T 3bg3_A 337 AADSMSGMTSQPSMGALVACTRGTPLDTEV 366 (718)
T ss_dssp BCGGGCSTTSCCBHHHHHHHHTTSTTCCCC
T ss_pred cCcccccccCchhHHHHHHHHHhcCCCccc
Confidence 543 22344577788888877766554
No 445
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=49.91 E-value=93 Score=24.50 Aligned_cols=154 Identities=17% Similarity=0.173 Sum_probs=75.0
Q ss_pred HHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC-CCCeeEEEeccCcccchHHHHhcCCCEEEEccCCccccc
Q 025927 75 QVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (246)
Q Consensus 75 ~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t-~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~ 153 (246)
.++.+.+.+.|.+=+|++= |... |.+.++.||+.. ..++-+ ++.......+....++|++-+..-........
T Consensus 17 a~~~~~~~~~dlvl~D~~~----p~~~-g~~~~~~l~~~~~~~~i~v-i~~~~~~~~~~~~~~~Ga~~~l~kp~~~~~~~ 90 (237)
T 3cwo_X 17 AVEKYKELKPDIVTMDITM----PEMN-GIDAIKEIMKIDPNAKIIV-CSAMGQQAMVIEAIKAGAKDFIVNTAAVENPS 90 (237)
T ss_dssp THHHHHHHCCSCEEEECCS----TTSS-HHHHHHHHHHHSSSCCEEE-ECCSSTHHHHHHHHHTTCCEEEESHHHHHCTH
T ss_pred HHHHHHhcCCCEEEEeCCC----CCCC-HHHHHHHHHHhCCCCCEEE-EECCCCHHHHHHHHHCCHHheEeCCcccChHH
Confidence 3455566678877677642 3322 567888877642 223322 22222245666778899987665431100122
Q ss_pred HHHHHHHHHHcCCc-EEEEEcC-------------------CCChHHHHHhhhh-cceEEEEee-cCCCCCCcccHHHHH
Q 025927 154 LHRTLNQIKDLGAK-AGVVLNP-------------------ATSLSAIECVLDV-VDLVLIMSV-NPGFGGQSFIESQVK 211 (246)
Q Consensus 154 ~~~~i~~Ik~~G~k-~GlAlnP-------------------~Tpve~l~~~l~~-vD~VLvMsV-~PGfgGQ~F~~~~l~ 211 (246)
+...+.. ..+.+ .-+.+.. .++.+.++.+... ...|+++.+ +.|- |..+. .+
T Consensus 91 l~~~i~~--~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~~~vli~~~~~~g~-~~g~~---~~ 164 (237)
T 3cwo_X 91 LITQIAQ--TFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYD---TE 164 (237)
T ss_dssp HHHHHHH--HHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTC-CSCCC---HH
T ss_pred HHHHHHH--HhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCCCeEEEEecCCCCc-ccccc---HH
Confidence 3222222 22322 3333322 1333444444332 566888886 4443 33333 33
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCChhhhhhcc
Q 025927 212 KISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 212 KI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~l~ 244 (246)
.|+++++ ..+. ..|.+.|.-+.+++.++.
T Consensus 165 ~i~~~~~---~~~~-Pvia~~g~~~~~~~~~~~ 193 (237)
T 3cwo_X 165 MIRFVRP---LTTL-PIIASGGAGKMEHFLEAF 193 (237)
T ss_dssp HHHHHGG---GCCS-CEEEESCCCSHHHHHHHH
T ss_pred HHHHHHH---hcCC-CEEecCCCCCHHHHHHHH
Confidence 4444333 2222 346666555567766653
No 446
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=49.90 E-value=86 Score=27.53 Aligned_cols=113 Identities=19% Similarity=0.262 Sum_probs=68.2
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCC-------h----HHHHHhhhhcce--E
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATS-------L----SAIECVLDVVDL--V 191 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-------v----e~l~~~l~~vD~--V 191 (246)
.+.+.++|++++.+ |.|- . +.+.+.+-++...++|+++=+.+.-... . ..++..++.++. =
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (259)
T 2i9e_A 79 PAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSN 158 (259)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCCTT
T ss_pred HHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcchhhcC
Confidence 46788899998876 4331 0 1334666677778999998777763321 1 124444533321 2
Q ss_pred EEEeecC----CCCCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhcc
Q 025927 192 LIMSVNP----GFGGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 192 LvMsV~P----GfgGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~ 244 (246)
+++.-|| | .|..=.|+-.+.+ +.+|+++.+. .-+..|.-=|+|+.+|+.++.
T Consensus 159 ~vIAYEPvWAIG-TG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~ 220 (259)
T 2i9e_A 159 VVIAYEPVWAIG-TGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELA 220 (259)
T ss_dssp EEEEECCGGGTT-SSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHH
T ss_pred EEEEEcCHHHcC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHh
Confidence 5788999 5 3555455444333 3445444321 113678899999999998875
No 447
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=49.60 E-value=31 Score=31.01 Aligned_cols=83 Identities=22% Similarity=0.311 Sum_probs=0.0
Q ss_pred HHHhhcccCCCCCeeEEEeccCccc--------chHHHHhcCCCEEEEccCCcc--cccHHHHHHHHHHcCCcEEEEE-c
Q 025927 105 LVVDALRPVTDLPLDVHLMIVEPEQ--------RVPDFIKAGADIVSVHCEQSS--TIHLHRTLNQIKDLGAKAGVVL-N 173 (246)
Q Consensus 105 ~~I~~ir~~t~~plDvHLMV~~P~~--------~i~~~~~agad~It~H~E~~~--~~~~~~~i~~Ik~~G~k~GlAl-n 173 (246)
.+.+.|+++ -+.=+||. +|++ .++.+.+.|.|.|.+=--..+ .+++.++++.||+. ...=+.| -
T Consensus 29 ~~~~~l~~~--~~~~~~li--DPdK~~~~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~-~~lPvil~f 103 (286)
T 3vk5_A 29 RVLARLREH--QPGPVHII--DPFKVPVTEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAA-TPLPVVLHF 103 (286)
T ss_dssp HHHHHHHHS--CCEEEEEE--CTTTSCHHHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred HHHHHHHhc--cCCceEEE--CCCCCCcHHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHh-CCCCEEEEC
Q ss_pred C---CCChHHHHHhhhhcceEEEEee
Q 025927 174 P---ATSLSAIECVLDVVDLVLIMSV 196 (246)
Q Consensus 174 P---~Tpve~l~~~l~~vD~VLvMsV 196 (246)
| +.+ ..+.+.+|.+++|||
T Consensus 104 PP~~g~~----~~i~~~aDa~l~psv 125 (286)
T 3vk5_A 104 PPRPGAG----FPVVRGADALLLPAL 125 (286)
T ss_dssp CCBTTTB----SCCCTTCSEEEEEEE
T ss_pred CCCCCCc----cccccCCCEEEEEEE
No 448
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=49.53 E-value=40 Score=29.63 Aligned_cols=110 Identities=15% Similarity=0.075 Sum_probs=65.4
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEEc-cCC
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH-CEQ 148 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~H-~E~ 148 (246)
..+.+.++.+.+.|+|.+++..-+ | +++++.+++. ++++- ..+..++ ......++|+|.|.++ .|.
T Consensus 83 ~~~~~~~~~~~~~g~d~V~~~~g~----p-----~~~~~~l~~~-gi~vi--~~v~t~~-~a~~~~~~GaD~i~v~g~~~ 149 (328)
T 2gjl_A 83 VPYAEYRAAIIEAGIRVVETAGND----P-----GEHIAEFRRH-GVKVI--HKCTAVR-HALKAERLGVDAVSIDGFEC 149 (328)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEESC----C-----HHHHHHHHHT-TCEEE--EEESSHH-HHHHHHHTTCSEEEEECTTC
T ss_pred ccHHHHHHHHHhcCCCEEEEcCCC----c-----HHHHHHHHHc-CCCEE--eeCCCHH-HHHHHHHcCCCEEEEECCCC
Confidence 446788999999999999987532 2 6888988875 55544 3355554 3456778999999985 232
Q ss_pred c---cc--ccHHHHHHHHHHcCCcEEEEEcCCC-ChHHHHHhhh-hcceEEE
Q 025927 149 S---ST--IHLHRTLNQIKDLGAKAGVVLNPAT-SLSAIECVLD-VVDLVLI 193 (246)
Q Consensus 149 ~---~~--~~~~~~i~~Ik~~G~k~GlAlnP~T-pve~l~~~l~-~vD~VLv 193 (246)
- .. ......+..+++.- ++=+...-+- .-+.+..++. -+|.|.+
T Consensus 150 GG~~G~~~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~v 200 (328)
T 2gjl_A 150 AGHPGEDDIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINM 200 (328)
T ss_dssp SBCCCSSCCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CcCCCCccccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 1 00 12345666666531 2223333332 3445555443 3666555
No 449
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=49.36 E-value=78 Score=25.55 Aligned_cols=121 Identities=12% Similarity=0.134 Sum_probs=65.1
Q ss_pred ecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEE-
Q 025927 64 ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV- 142 (246)
Q Consensus 64 Il~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~I- 142 (246)
++--|.. +.++.+.++|+|.+|+....+.. -...++.+++. +..+=+=+-...|...++.+. .++|+|
T Consensus 68 l~v~d~~---~~i~~~~~~gad~v~vh~~~~~~------~~~~~~~~~~~-g~~i~~~~~~~t~~e~~~~~~-~~~d~vl 136 (220)
T 2fli_A 68 LMVVDPE---RYVEAFAQAGADIMTIHTESTRH------IHGALQKIKAA-GMKAGVVINPGTPATALEPLL-DLVDQVL 136 (220)
T ss_dssp EESSSGG---GGHHHHHHHTCSEEEEEGGGCSC------HHHHHHHHHHT-TSEEEEEECTTSCGGGGGGGT-TTCSEEE
T ss_pred EeecCHH---HHHHHHHHcCCCEEEEccCcccc------HHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHH-hhCCEEE
Confidence 4444543 34677888999999876655422 23566777664 333222222245555555544 458988
Q ss_pred --EEccCCcc---cccHHHHHHHHHH----cCCcEEEEEcCCCChHHHHHhhh-hcceEEEEe
Q 025927 143 --SVHCEQSS---TIHLHRTLNQIKD----LGAKAGVVLNPATSLSAIECVLD-VVDLVLIMS 195 (246)
Q Consensus 143 --t~H~E~~~---~~~~~~~i~~Ik~----~G~k~GlAlnP~Tpve~l~~~l~-~vD~VLvMs 195 (246)
+++.=... .....+-++.+|+ .|...-+.+.++-..+.+.+++. -+|.|.+-+
T Consensus 137 ~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vvvGs 199 (220)
T 2fli_A 137 IMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGS 199 (220)
T ss_dssp EESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred EEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEEECh
Confidence 44431111 1111223444443 23345566677766677777666 588877643
No 450
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=49.20 E-value=73 Score=27.04 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=56.3
Q ss_pred ChhhHHHHHHHHHHcC-CCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHH---HhcCCCEEE
Q 025927 68 NFAKLGEQVKAVELAG-CDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDF---IKAGADIVS 143 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g-~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~---~~agad~It 143 (246)
+-....+-++.+.+.| +|++=++..- ..+.++.++..+.+....|-.-..|+.+.+.| .+.|||++=
T Consensus 76 ~~~~~~~ll~~~~~~g~~d~iDvEl~~---------~~~~i~~~~~~~kvI~S~Hdf~~tp~el~~~~~~~~~~gaDivK 146 (231)
T 2ocz_A 76 SSQEYVDIIKEINAIYNPDYIDFEYFT---------HKSVFQEMLDFPNLILSYHNFEETPENLMEAFSEMTKLAPRVVK 146 (231)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEETTT---------TGGGGGGGTTCSSEEEEEEESSCCCTTHHHHHHHHHHTCCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCCEEEEECCC---------CHHHHHHhhcCCeEEEEecCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 3344445566666666 9998777632 24567777777778899999888886655544 457999776
Q ss_pred EccCCcccccHHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIK 162 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik 162 (246)
+=.-+.+..+..++++..+
T Consensus 147 ia~~a~~~~D~l~ll~~~~ 165 (231)
T 2ocz_A 147 IAVMPQSEQDVLDLMNYTR 165 (231)
T ss_dssp EEECCSSHHHHHHHHHHHH
T ss_pred EEeecCCHHHHHHHHHHHH
Confidence 6555433456666665544
No 451
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=49.12 E-value=36 Score=27.86 Aligned_cols=81 Identities=17% Similarity=0.266 Sum_probs=46.8
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeec-cCcccCC-CCCCHHHHhhcccCCCCCeeEEEeccCcccchHHH
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVM-DGRFVPN-ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDF 134 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIM-DG~FVpN-~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~ 134 (246)
...+..|+- +. +++++..+.|+|++=++-. ++.--|. ..++.+.++++++..++|+-+===+ +|++ +..+
T Consensus 110 ~~~ig~sv~-----t~-~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~n-v~~~ 181 (221)
T 1yad_A 110 HLHIGRSVH-----SL-EEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDR-LRDV 181 (221)
T ss_dssp TCEEEEEEC-----SH-HHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC-CGGG-HHHH
T ss_pred CCEEEEEcC-----CH-HHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHH-HHHH
Confidence 345555553 22 4566777899999988542 1111121 2567788888876556664332123 6766 4566
Q ss_pred HhcCCCEEEEc
Q 025927 135 IKAGADIVSVH 145 (246)
Q Consensus 135 ~~agad~It~H 145 (246)
.++|++.+.+=
T Consensus 182 ~~~Ga~gv~vg 192 (221)
T 1yad_A 182 KQAGADGIAVM 192 (221)
T ss_dssp HHTTCSEEEES
T ss_pred HHcCCCEEEEh
Confidence 77999988874
No 452
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=49.01 E-value=1.5e+02 Score=27.38 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=69.0
Q ss_pred EEeeeeccc---ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccC-cccchHHH
Q 025927 59 IVSPSILSA---NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVE-PEQRVPDF 134 (246)
Q Consensus 59 ~IsPSIl~a---D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~-P~~~i~~~ 134 (246)
-|+|.++.- ++ +.++.+.+.|++.|=+| .+|..+.+..+-.. +.+=|=.++ ...+++.+
T Consensus 69 DIsp~~l~~Lg~s~----~dl~~~~~lGi~glRLD---------~Gf~~~eia~ls~n----lkIeLNASti~~~~l~~l 131 (372)
T 2p0o_A 69 DISGEALKRAGFSF----DELEPLIELGVTGLRMD---------YGITIEQMAHASHK----IDIGLNASTITLEEVAEL 131 (372)
T ss_dssp EECHHHHHTTTCBT----TBCHHHHHHTCCEEEEC---------SSCCHHHHHHHHTT----SEEEEETTTCCHHHHHHH
T ss_pred ECCHHHHHHcCCCH----HHHHHHHHcCCCEEEEc---------CCCCHHHHHHHhcC----CEEEEECccCCHHHHHHH
Confidence 467766632 22 23445566688888887 46788888888543 456666667 77899999
Q ss_pred HhcCCC---EEEEc-----cCC-cccccHHHHHHHHHHcCCcEEEEEcCC
Q 025927 135 IKAGAD---IVSVH-----CEQ-SSTIHLHRTLNQIKDLGAKAGVVLNPA 175 (246)
Q Consensus 135 ~~agad---~It~H-----~E~-~~~~~~~~~i~~Ik~~G~k~GlAlnP~ 175 (246)
.+.|++ .+.-| .|+ ++.+...+.=+++|+.|++++--+.-+
T Consensus 132 ~~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~ 181 (372)
T 2p0o_A 132 KAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGD 181 (372)
T ss_dssp HHTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 999998 77777 343 123456677788999999999555443
No 453
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=48.66 E-value=31 Score=31.06 Aligned_cols=128 Identities=13% Similarity=0.152 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeccCcccCCC-CCC--HHHHhhccc---CCCCCeeEEEe------------ccCcc---
Q 025927 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIG--PLVVDALRP---VTDLPLDVHLM------------IVEPE--- 128 (246)
Q Consensus 70 ~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~-tfg--p~~I~~ir~---~t~~plDvHLM------------V~~P~--- 128 (246)
..+.+.++.+.+.|.+.+-+-..| +.|.- .+. ...++++++ -.++.+.+|-- ...|.
T Consensus 33 ~~l~e~l~~aa~~G~d~VEl~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~d~~~ 110 (394)
T 1xla_A 33 LDPVEAVHKLAELGAYGITFHDND--LIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSI 110 (394)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEHHH--HSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHHH
T ss_pred cCHHHHHHHHHHcCCCEEEecCCc--cCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCCCHHH
Confidence 348899999999999988664433 22210 111 234444443 24666655422 11221
Q ss_pred ---------cchHHHHhcCCCEEEEccCCc--------c--------cccHHHHHHHHHHcC--CcEEEEEcCC------
Q 025927 129 ---------QRVPDFIKAGADIVSVHCEQS--------S--------TIHLHRTLNQIKDLG--AKAGVVLNPA------ 175 (246)
Q Consensus 129 ---------~~i~~~~~agad~It~H~E~~--------~--------~~~~~~~i~~Ik~~G--~k~GlAlnP~------ 175 (246)
+.++...+.|++.|.+|.-.. . .+.+.++....++.| +++++=-.|.
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~~~ 190 (394)
T 1xla_A 111 RRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDI 190 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCccc
Confidence 234444567999999985310 0 012345555566788 6655533331
Q ss_pred --CChHHHHHhhhhcce--EEEEeecCC
Q 025927 176 --TSLSAIECVLDVVDL--VLIMSVNPG 199 (246)
Q Consensus 176 --Tpve~l~~~l~~vD~--VLvMsV~PG 199 (246)
...+.+..+++.+|. -+=+..+.|
T Consensus 191 ~~~t~~~~~~li~~v~~pn~vgl~lD~~ 218 (394)
T 1xla_A 191 FLPTVGHGLAFIEQLEHGDIVGLNPETG 218 (394)
T ss_dssp SSCSHHHHHHHHTTCTTGGGEEECCBHH
T ss_pred cCCCHHHHHHHHHHhCCCCceEEEEecC
Confidence 244566677777764 244555665
No 454
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=48.63 E-value=1.4e+02 Score=26.52 Aligned_cols=78 Identities=21% Similarity=0.288 Sum_probs=46.7
Q ss_pred cccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCH--------HHHhhc---ccC-CCCCeeEEEeccC------
Q 025927 65 LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP--------LVVDAL---RPV-TDLPLDVHLMIVE------ 126 (246)
Q Consensus 65 l~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp--------~~I~~i---r~~-t~~plDvHLMV~~------ 126 (246)
+..+..+..+.+++++++|+..+|+. ||.+.|-.+... +.++.| +.- .+-++- ++-..
T Consensus 89 yg~~~~~~~~~v~~l~~aGa~gv~iE--d~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~--i~aRtda~~~~ 164 (295)
T 1xg4_A 89 FGSSAFNVARTVKSMIKAGAAGLHIE--DQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFV--IMARTDALAVE 164 (295)
T ss_dssp SSSSHHHHHHHHHHHHHHTCSEEEEE--CBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSE--EEEEECCHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCeEEEEC--CCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcE--EEEecHHhhhc
Confidence 54578889999999999999999965 777544332211 333333 221 112222 22221
Q ss_pred ----cccchHHHHhcCCCEEEEcc
Q 025927 127 ----PEQRVPDFIKAGADIVSVHC 146 (246)
Q Consensus 127 ----P~~~i~~~~~agad~It~H~ 146 (246)
-.+-...|.++|||.|.+|.
T Consensus 165 gl~~ai~ra~ay~eAGAd~i~~e~ 188 (295)
T 1xg4_A 165 GLDAAIERAQAYVEAGAEMLFPEA 188 (295)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEETT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC
Confidence 12223467889999999875
No 455
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=48.52 E-value=31 Score=30.41 Aligned_cols=75 Identities=21% Similarity=0.096 Sum_probs=40.9
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCC----CCeeEEEeccCcccchHHH--HhcCCC
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTD----LPLDVHLMIVEPEQRVPDF--IKAGAD 140 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~----~plDvHLMV~~P~~~i~~~--~~agad 140 (246)
.|+..+.+.++++.+.|++.|-+==+=|.-.|.-.. +.++++++..+ .++.+|.=-..=......+ +++|++
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~--~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~ 224 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFG--QLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGAR 224 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHH--HHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHH--HHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCC
Confidence 566677777777788888776544444544443211 34455555322 4577776544333333322 456777
Q ss_pred EEE
Q 025927 141 IVS 143 (246)
Q Consensus 141 ~It 143 (246)
+|-
T Consensus 225 ~vd 227 (293)
T 3ewb_X 225 RVE 227 (293)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 456
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=48.33 E-value=97 Score=26.89 Aligned_cols=114 Identities=19% Similarity=0.249 Sum_probs=66.7
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCC-------h----HHHHHhhhhcce---
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATS-------L----SAIECVLDVVDL--- 190 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-------v----e~l~~~l~~vD~--- 190 (246)
.+.+.++|++++.+ |.|- . +.+.+.+=++...++|+++=+.+.-... . ..++..++.++-
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~~~~~ 153 (244)
T 2v5b_A 74 LASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAW 153 (244)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGG
T ss_pred HHHHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 67889999998876 4441 0 1222334466677899998777753211 1 123334444432
Q ss_pred -EEEEeecC----CCCCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhccc
Q 025927 191 -VLIMSVNP----GFGGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 191 -VLvMsV~P----GfgGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
=++..-|| | .|..-.|+-.+.+ +.+|+++.+. .-+..|.-=|+|+.+|++++..
T Consensus 154 ~~~vIAYEPvWAIG-TG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~ 218 (244)
T 2v5b_A 154 SRVVIAYEPVWAIG-TGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQ 218 (244)
T ss_dssp GGEEEEECCHHHHS-SSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCHHHHHHHHT
T ss_pred CCEEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHhHHHHHhc
Confidence 16679999 5 3555444443332 3334444321 1136788999999999998753
No 457
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=48.09 E-value=1.7e+02 Score=26.96 Aligned_cols=163 Identities=15% Similarity=0.217 Sum_probs=86.3
Q ss_pred CCCCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCee-EEEec-cCcccc
Q 025927 53 FSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD-VHLMI-VEPEQR 130 (246)
Q Consensus 53 ~~~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plD-vHLMV-~~P~~~ 130 (246)
++.....+.+.+=+-.. ..-++.+.+.|+ .+||.. ...+..+++. +++-+ +++.- ..+...
T Consensus 70 ~~~~~~~i~yavKAn~~---~~v~~~l~~~G~---g~dvaS----------~~E~~~~~~~-G~~~~~I~~~g~~k~~~e 132 (443)
T 3vab_A 70 FADMDTLVTYALKANSN---QAVLTALAKLGA---GADTVS----------QGEIRRALAA-GIPANRIVFSGVGKTPRE 132 (443)
T ss_dssp TTTSCEEEEEEGGGCCC---HHHHHHHHHTTC---EEEESS----------HHHHHHHHHT-TCCGGGEEEECTTCCHHH
T ss_pred hccCCcEEEEEeccCCC---HHHHHHHHHcCC---cEEEeC----------HHHHHHHHHc-CCChhhEEEcCCCCCHHH
Confidence 33334556666554332 244566666775 666654 2345555553 45333 33331 235567
Q ss_pred hHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcC--CcEEEEEcCCC-------------------ChHHHHHhhh---
Q 025927 131 VPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLG--AKAGVVLNPAT-------------------SLSAIECVLD--- 186 (246)
Q Consensus 131 i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G--~k~GlAlnP~T-------------------pve~l~~~l~--- 186 (246)
++...+.|+.++++.-+ .++.++.+..++.| .+++|=+||+. +.+.+..++.
T Consensus 133 i~~a~~~gv~~~~vds~----~el~~l~~~a~~~~~~~~V~lRVn~~~~~~~~~~i~tG~~~sRfGi~~~e~~~ll~~~~ 208 (443)
T 3vab_A 133 MDFALEAGIYCFNVESE----PELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAA 208 (443)
T ss_dssp HHHHHHHTCSEEEECCH----HHHHHHHHHHHHHTCCEEEEEEEECCBCTTTCCBC---CCCCSSSEEGGGHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECCH----HHHHHHHHHHHhcCCCceEEEEECCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHh
Confidence 77888888876665433 45666666667767 45777778751 1244544433
Q ss_pred hcceEEEEeecCCCCCCccc----HHHHHHHHHHHHHHHhcCCCCe-EEEeCCCC
Q 025927 187 VVDLVLIMSVNPGFGGQSFI----ESQVKKISDLRRMCLEKGVNPW-IEVDGGVG 236 (246)
Q Consensus 187 ~vD~VLvMsV~PGfgGQ~F~----~~~l~KI~~lr~l~~~~~~~~~-I~VDGGI~ 236 (246)
..+.+-+-.+--=+|.|... ...++++.++.+.+.+.|.++. |-+=||..
T Consensus 209 ~~~~l~l~Glh~H~gs~~~d~~~~~~a~~~~~~l~~~l~~~G~~l~~ldiGGG~~ 263 (443)
T 3vab_A 209 SLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLG 263 (443)
T ss_dssp HSTTEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTTCCCCEEECCCCBC
T ss_pred hCCCceEEEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEeCCCcc
Confidence 23333332222223444333 3456666666555556676654 55557653
No 458
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=47.94 E-value=29 Score=32.90 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=52.6
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeec-cCcccCCC-CCCH--------HHHhhcccC-CCCCeeEEEecc--CcccchHH
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVM-DGRFVPNI-TIGP--------LVVDALRPV-TDLPLDVHLMIV--EPEQRVPD 133 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIM-DG~FVpN~-tfgp--------~~I~~ir~~-t~~plDvHLMV~--~P~~~i~~ 133 (246)
.|....-+..+++.+.|+|.| ||= ..+ -|+. ..+. .+|++|++. ...+.++-+.|. +|+. ++.
T Consensus 209 ~~~~~al~~A~~mv~~GAdII--DIGgeST-rPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~V-aea 284 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEII--DIGAEST-KPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEV-MQK 284 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEE--EEECCCC-CC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHH-HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEE--EECCCCC-CCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHH-HHH
Confidence 355666777888888999976 443 111 1321 1111 135566541 111234455655 4443 445
Q ss_pred HHh--cCCCE-EEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCC
Q 025927 134 FIK--AGADI-VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS 177 (246)
Q Consensus 134 ~~~--agad~-It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp 177 (246)
-.+ +|+++ |- =+-. ..-.+++..+++.|+.+-+.=+.++|
T Consensus 285 AL~~~aGa~i~IN-DVsg---~~d~~m~~v~a~~g~~vVlMh~~G~P 327 (442)
T 3mcm_A 285 ILAKHHDIIWMIN-DVEC---NNIEQKAQLIAKYNKKYVIIHNLGIT 327 (442)
T ss_dssp HHHHHGGGCCEEE-ECCC---TTHHHHHHHHHHHTCEEEEECC----
T ss_pred HHhhCCCCCEEEE-cCCC---CCChHHHHHHHHhCCeEEEECCCCCC
Confidence 566 89998 42 1111 12236788888888766655555554
No 459
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=47.58 E-value=1.7e+02 Score=26.77 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=56.7
Q ss_pred ChhhHHHHHHHHHH-cCCCEEEeeeccCcccCCCCCC----HHHHhhcccCCCCCeeEEEec----cCc----ccchHHH
Q 025927 68 NFAKLGEQVKAVEL-AGCDWIHVDVMDGRFVPNITIG----PLVVDALRPVTDLPLDVHLMI----VEP----EQRVPDF 134 (246)
Q Consensus 68 D~~~l~~~i~~l~~-~g~d~lHiDIMDG~FVpN~tfg----p~~I~~ir~~t~~plDvHLMV----~~P----~~~i~~~ 134 (246)
+...+.+.++.+.+ .|+..++ ++-|. | +... .++++.++++.++. .+.+-+ ..| ..+++.|
T Consensus 146 s~eei~~~i~~i~~~~gi~~V~--ltGGE--P-ll~~d~~L~~il~~l~~~~~v~-~i~i~Tng~~~~p~~it~e~l~~L 219 (416)
T 2a5h_A 146 PMERIDKAIDYIRNTPQVRDVL--LSGGD--A-LLVSDETLEYIIAKLREIPHVE-IVRIGSRTPVVLPQRITPELVNML 219 (416)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEE--EEESC--T-TSSCHHHHHHHHHHHHTSTTCC-EEEEECSHHHHCGGGCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCcEEE--EECCC--C-CCCCHHHHHHHHHHHHhcCCcc-EEEEEecccccccccCCHHHHHHH
Confidence 45566677777776 5777654 45564 2 2222 34566666653331 344432 234 4667777
Q ss_pred HhcCCCEEEEccCCc--ccccHHHHHHHHHHcCCcEEE--EEcC
Q 025927 135 IKAGADIVSVHCEQS--STIHLHRTLNQIKDLGAKAGV--VLNP 174 (246)
Q Consensus 135 ~~agad~It~H~E~~--~~~~~~~~i~~Ik~~G~k~Gl--AlnP 174 (246)
.++..=.|++|.... -.....+.++.+++.|+.+++ ++.+
T Consensus 220 ~~~~~v~Isl~~~~~~ei~~~v~~ai~~L~~aGi~v~i~~vll~ 263 (416)
T 2a5h_A 220 KKYHPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLR 263 (416)
T ss_dssp GGGCSEEEEECCCSGGGCCHHHHHHHHHHHHTTCCEEEEEECCT
T ss_pred HhcCcEEEEEecCCHHHHhHHHHHHHHHHHHcCCEEEEEEEEEC
Confidence 776222566654321 124567788889999987655 4544
No 460
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=47.52 E-value=56 Score=24.93 Aligned_cols=77 Identities=16% Similarity=0.142 Sum_probs=49.5
Q ss_pred CCCEEEEccCCc-----------ccccHHHHHHHHHHcCCcEEE--EEcCCCChHHHHHhhh--hcceEEEEeecCCCCC
Q 025927 138 GADIVSVHCEQS-----------STIHLHRTLNQIKDLGAKAGV--VLNPATSLSAIECVLD--VVDLVLIMSVNPGFGG 202 (246)
Q Consensus 138 gad~It~H~E~~-----------~~~~~~~~i~~Ik~~G~k~Gl--AlnP~Tpve~l~~~l~--~vD~VLvMsV~PGfgG 202 (246)
|+....+|+... ....+.++.+.+++.|..+-+ .+..+.|.+.|..+.. .+|+|.+=+-..+.-.
T Consensus 53 ~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~~~~~ 132 (155)
T 3dlo_A 53 GVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRKRSPTG 132 (155)
T ss_dssp TCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCEECTTS
T ss_pred CCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCCCCCCC
Confidence 677777776210 012245566677788887764 3566889999999988 6888766555444444
Q ss_pred CcccHHHHHHHH
Q 025927 203 QSFIESQVKKIS 214 (246)
Q Consensus 203 Q~F~~~~l~KI~ 214 (246)
+.|.-.+.+++-
T Consensus 133 ~~~lGSv~~~vl 144 (155)
T 3dlo_A 133 KLIFGSVARDVI 144 (155)
T ss_dssp CEECCHHHHHHH
T ss_pred CEEeccHHHHHH
Confidence 556666666553
No 461
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A
Probab=47.49 E-value=26 Score=30.69 Aligned_cols=67 Identities=10% Similarity=-0.060 Sum_probs=44.9
Q ss_pred hHHHHhcCCCEEEEccC-Cc-ccccHHHHHHHHHH------cCCcEEEEEcCCCChHHHHHhhhhcceEEEEeecC
Q 025927 131 VPDFIKAGADIVSVHCE-QS-STIHLHRTLNQIKD------LGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNP 198 (246)
Q Consensus 131 i~~~~~agad~It~H~E-~~-~~~~~~~~i~~Ik~------~G~k~GlAlnP~Tpve~l~~~l~~vD~VLvMsV~P 198 (246)
++.+.+.|-|-|-+.+| -- ...+...+++.+|+ .+...-+|+.+... ..-..+.+.+|+|.||+=+-
T Consensus 98 ~~~~~~~~~DGiDiDwE~~p~~~~~~~~ll~eLr~~~l~~~~~~~ls~av~~~~~-~~~~~~~~~~D~i~vm~YD~ 172 (312)
T 3fnd_A 98 IAFTKEYKLDGFDIDYEEYDNWDKNFPSLLVFARGLYLAKEKNMLMTCAVNSRWL-NYGTEWEQYFDYINLMSYDR 172 (312)
T ss_dssp HHHHHHTTCSEEEECCCCCTTHHHHHHHHHHHHHHHHHHSCTTCEEEEEECCSSS-CCTTTSGGGCSEEEECCCCT
T ss_pred HHHHHHcCCCeEEEeeeeCCCchHHHHHHHHHHHHHHhcccCCcEEEEEecCCcc-cccHHHHhhCCEEEEeeccC
Confidence 34445679999999999 21 12455667777776 45677888876322 11145677899999999874
No 462
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=47.21 E-value=69 Score=27.65 Aligned_cols=74 Identities=20% Similarity=0.370 Sum_probs=52.8
Q ss_pred CeeEEEec-cCcccchHHHHhcCCCEEEEccCCccccc---HHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh-cceE
Q 025927 117 PLDVHLMI-VEPEQRVPDFIKAGADIVSVHCEQSSTIH---LHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLV 191 (246)
Q Consensus 117 plDvHLMV-~~P~~~i~~~~~agad~It~H~E~~~~~~---~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~-vD~V 191 (246)
.+=..+.. .+|.. ++....+|+|.|.+=.|.. ..+ +...++.++..|..+-|=+|+.++ .+++.+++. +|.|
T Consensus 16 ~~g~~~~~~~~p~~-~e~a~~~g~D~vilDlEha-v~~~~k~~~~l~a~~~~~~~~~VRVn~~~~-~di~~~ld~G~~gI 92 (261)
T 3qz6_A 16 VVGTMLNLVYNPDI-VRIYAEAGLDYFIVDCEHA-AYTFREINHLVSVAKNAGVSVLVRIPQVDR-AHVQRLLDIGAEGF 92 (261)
T ss_dssp EEEEEESSCCCTTH-HHHHHHTTCSEEEEESSSS-CCCHHHHHHHHHHHHHHTCEEEEECSSCCH-HHHHHHHHHTCCEE
T ss_pred EEEEEEecCCCHHH-HHHHhcCCcCEEEEeccCC-CCCHHHHHHHHHHHhhcCCeEEEEeCCCCH-HHHHHHHhcCCCEE
Confidence 34566666 77765 6788899999999999963 333 444555555678888888888766 577777763 7776
Q ss_pred EE
Q 025927 192 LI 193 (246)
Q Consensus 192 Lv 193 (246)
++
T Consensus 93 ~l 94 (261)
T 3qz6_A 93 MI 94 (261)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 463
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=47.17 E-value=98 Score=27.19 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=57.7
Q ss_pred CcccchHHHHhcCCCEEEEccCCc--ccccHHHHHHHHHHcCCcEEEEEcC-------CCChHHHHH----hhhh-cceE
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQS--STIHLHRTLNQIKDLGAKAGVVLNP-------ATSLSAIEC----VLDV-VDLV 191 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~~--~~~~~~~~i~~Ik~~G~k~GlAlnP-------~Tpve~l~~----~l~~-vD~V 191 (246)
.-+.|++.+.+.|-+.|-+--=+. ..++..++|+.+++.|.++=-=+.- ..+++.+.. .|+. +|+|
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~V 165 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYV 165 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 445789999999999987754322 2345678999999998877221111 123333333 3332 8999
Q ss_pred EEEeecCCCC-C-----CcccHHHHHHH
Q 025927 192 LIMSVNPGFG-G-----QSFIESQVKKI 213 (246)
Q Consensus 192 LvMsV~PGfg-G-----Q~F~~~~l~KI 213 (246)
++=+-|-|.+ | .....+.+++|
T Consensus 166 iiEarEsG~~iGi~~~~g~~r~d~v~~i 193 (251)
T 1qwg_A 166 IIEGRESGKGKGLFDKEGKVKENELDVL 193 (251)
T ss_dssp EECCTTTCCSSTTBCTTSCBCHHHHHHH
T ss_pred EEeeecccCCcccCCCCCCCcHHHHHHH
Confidence 9999888875 3 46777777776
No 464
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=47.06 E-value=21 Score=32.33 Aligned_cols=99 Identities=20% Similarity=0.151 Sum_probs=64.4
Q ss_pred HHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhc-c--cC-CCCCeeEEEeccCcccchHHHHhcCCCEEEEccC
Q 025927 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDAL-R--PV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE 147 (246)
Q Consensus 72 l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~i-r--~~-t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E 147 (246)
+.+--+.++++|++- |+---|| ..|.+..+...++.. + .. ++.-..||..+-|-...++.+.+.|+|.|+
T Consensus 194 l~~i~~~~~~~Gi~~-h~wqsDG-ItnC~~r~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~~~m~~l~~~GVDGII---- 267 (302)
T 3rlg_A 194 IGDVGKAYKKAGITG-HIWQSDG-ITNCLPRGLSRVNAAVANRDSANGFINKVYYWTVDKRSTTRDALDAGVDGIM---- 267 (302)
T ss_dssp HHHHHHHHHHTTCCS-CBEEEEE-CCTTSCCCSHHHHHHHHHHTSTTCCCSEEEEECCCSHHHHHHHHHTTCSEEE----
T ss_pred HHHHHHHHHhcCCcC-cEEecCC-cccceeccHHHHHHHHHhccCCCCceEEEEEEeCCCHHHHHHHHHcCCCEEE----
Confidence 445556666778886 8888998 456776666455433 2 22 234468999998888889999999999887
Q ss_pred CcccccHHHHHHHHHHcCCc--EEEEEcCCCChH
Q 025927 148 QSSTIHLHRTLNQIKDLGAK--AGVVLNPATSLS 179 (246)
Q Consensus 148 ~~~~~~~~~~i~~Ik~~G~k--~GlAlnP~Tpve 179 (246)
++.|.++.+.+++.|++ .=+|=--+.|+|
T Consensus 268 ---TD~Pd~l~~~l~~~~~~~~~RlAt~~DnPw~ 298 (302)
T 3rlg_A 268 ---TNYPDVITDVLNEAAYKKKFRVATYDDNPWV 298 (302)
T ss_dssp ---ESCHHHHHHHHTSHHHHTTEEECCTTSCTTS
T ss_pred ---CCCHHHHHHHHHhcCcccceeeccCCCCcch
Confidence 34566667666655533 334333334443
No 465
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=47.04 E-value=70 Score=27.48 Aligned_cols=121 Identities=14% Similarity=0.086 Sum_probs=71.2
Q ss_pred ecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEE
Q 025927 64 ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (246)
Q Consensus 64 Il~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~I 142 (246)
+++-|+-.-..++..+.++|+|.+|+...+-. +.++++-+. ..+-+++-.-|.+.+. ++...+.|+++|
T Consensus 109 vl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~---------~~l~~l~~~a~~lGl~~lvev~~~~E-~~~a~~~gad~I 178 (254)
T 1vc4_A 109 LLRKDFVVDPFMLEEARAFGASAALLIVALLG---------ELTGAYLEEARRLGLEALVEVHTERE-LEIALEAGAEVL 178 (254)
T ss_dssp EEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG---------GGHHHHHHHHHHHTCEEEEEECSHHH-HHHHHHHTCSEE
T ss_pred EEECCcCCCHHHHHHHHHcCCCEEEECccchH---------HHHHHHHHHHHHCCCeEEEEECCHHH-HHHHHHcCCCEE
Confidence 45566666666888899999999999988632 123333110 0134676666667665 456677899999
Q ss_pred EEccCCcc-----cccHHHHHHHHHHcC-CcEEEEEcCCCChHHHHHhhhhcceEEEE
Q 025927 143 SVHCEQSS-----TIHLHRTLNQIKDLG-AKAGVVLNPATSLSAIECVLDVVDLVLIM 194 (246)
Q Consensus 143 t~H~E~~~-----~~~~~~~i~~Ik~~G-~k~GlAlnP~Tpve~l~~~l~~vD~VLvM 194 (246)
.++.-... .....++.+.+.+.| -..=+|..-=+..+++..+..-+|-|+|-
T Consensus 179 Gvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~Ga~gvlVG 236 (254)
T 1vc4_A 179 GINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEGLFDAVLIG 236 (254)
T ss_dssp EEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTTTCSEEEEC
T ss_pred EEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHcCCCEEEEe
Confidence 99753210 112233444443321 12345544335577777776667777763
No 466
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=47.01 E-value=23 Score=29.85 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=64.9
Q ss_pred CcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHh
Q 025927 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK 136 (246)
Q Consensus 57 ~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~ 136 (246)
.+..-+-++=.|-..++..++.+++..-|.+ -+|-| . -|++|+++++.++.|+-+==.+++++. ++...+
T Consensus 101 gL~tIqR~FliDS~al~~~~~~i~~~~PD~i--EiLPG-----i--~p~iI~~i~~~~~~PiIaGGlI~~~ed-v~~al~ 170 (192)
T 3kts_A 101 KMLAIQRLFMIDSSAYNKGVALIQKVQPDCI--ELLPG-----I--IPEQVQKMTQKLHIPVIAGGLIETSEQ-VNQVIA 170 (192)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHHHCCSEE--EEECT-----T--CHHHHHHHHHHHCCCEEEESSCCSHHH-HHHHHT
T ss_pred CCeEEEEEEEEEcchHHHHHHHHhhcCCCEE--EECCc-----h--hHHHHHHHHHhcCCCEEEECCcCCHHH-HHHHHH
Confidence 4566677888999999999999999999987 66654 3 379999999999999999888988877 556678
Q ss_pred cCCCEEEE
Q 025927 137 AGADIVSV 144 (246)
Q Consensus 137 agad~It~ 144 (246)
+||+.|+.
T Consensus 171 aGA~aVsT 178 (192)
T 3kts_A 171 SGAIAVTT 178 (192)
T ss_dssp TTEEEEEE
T ss_pred cCCeEEEe
Confidence 89999986
No 467
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=46.94 E-value=2e+02 Score=27.38 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=102.9
Q ss_pred EeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcc---cCCCCCCH----HHHhhcccCCCCC---eeEEEeccCc--
Q 025927 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF---VPNITIGP----LVVDALRPVTDLP---LDVHLMIVEP-- 127 (246)
Q Consensus 60 IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~F---VpN~tfgp----~~I~~ir~~t~~p---lDvHLMV~~P-- 127 (246)
=.+|+-++++.-++--++..++.+...| +.+.-+.. ..-.++.| .+++++-+..++| +-+||==-.|
T Consensus 22 gi~av~~~n~e~i~Ail~aAee~~sPVI-Ie~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~ 100 (450)
T 3txv_A 22 GIPSICSAHPLVIEAAMLRAHREKAPVL-IEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNP 100 (450)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHSCSCEE-EEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGG
T ss_pred EEEEeCcCCHHHHHHHHHHHHHhCCCEE-EEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCcc
Confidence 3467777888888899999999887754 55554321 11123333 3344443445677 4777755556
Q ss_pred -------------ccchHHHHhcCCCEEEEccCCccc---c-----------cHHHHHHHHHHcCCcE-----EEEEcC-
Q 025927 128 -------------EQRVPDFIKAGADIVSVHCEQSST---I-----------HLHRTLNQIKDLGAKA-----GVVLNP- 174 (246)
Q Consensus 128 -------------~~~i~~~~~agad~It~H~E~~~~---~-----------~~~~~i~~Ik~~G~k~-----GlAlnP- 174 (246)
...+..++++|-..|- ++++.. + ...++++.+++.+... |-.+.-
T Consensus 101 w~~~~~~~am~~a~e~i~~aI~AGFtSVM--iD~S~~p~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtE 178 (450)
T 3txv_A 101 WKHLPADEAMAKAEAMITAYAKAGFTKLH--LDTSMGCAGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTE 178 (450)
T ss_dssp GTTSCHHHHHHHHHHHHHHHHTTTCCEEE--ECCCBCCSSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC
T ss_pred cccccHHHHHHHHHHHHHHHHHcCCCEEE--ECCCCCchhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeee
Confidence 5778888888866554 443210 0 1234557777754443 333332
Q ss_pred ---------------CCChHHHHHhhhh---------c----ceEEEEeecCC--CCCCcccHHHHHHHHHHHHHHHhcC
Q 025927 175 ---------------ATSLSAIECVLDV---------V----DLVLIMSVNPG--FGGQSFIESQVKKISDLRRMCLEKG 224 (246)
Q Consensus 175 ---------------~Tpve~l~~~l~~---------v----D~VLvMsV~PG--fgGQ~F~~~~l~KI~~lr~l~~~~~ 224 (246)
-|..+..+.++.. + ..|.-+.|.|| |+...-...-.+|+++|++.++.-.
T Consensus 179 vpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P 258 (450)
T 3txv_A 179 VPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLH 258 (450)
T ss_dssp -------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTST
T ss_pred cCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCC
Confidence 3777888888753 3 45667799998 5432212222335566666663321
Q ss_pred CCCeEEEeC--CCChhhhhhccc
Q 025927 225 VNPWIEVDG--GVGPKNAYKVPN 245 (246)
Q Consensus 225 ~~~~I~VDG--GI~~e~i~~l~~ 245 (246)
++.++-=. |++.++++++++
T Consensus 259 -~LVlhghStDy~~~e~l~~~V~ 280 (450)
T 3txv_A 259 -GMVFEAHSTDYQTPDALRELVA 280 (450)
T ss_dssp -TCEEEESCCTTCCHHHHHHHHH
T ss_pred -CEEEecCCCCCCCHHHHHHHHH
Confidence 13444433 668888887653
No 468
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=46.71 E-value=42 Score=30.37 Aligned_cols=31 Identities=10% Similarity=0.149 Sum_probs=25.6
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeeeccCcccCCC
Q 025927 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI 100 (246)
Q Consensus 68 D~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~ 100 (246)
+..+..+.+++++++|+.-+|+. |+.+.|-.
T Consensus 114 ~~~~v~~tv~~l~~aGaagv~iE--D~~~~k~c 144 (318)
T 1zlp_A 114 GPLNVQRFIRELISAGAKGVFLE--DQVWPKKC 144 (318)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CBCSSCCC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEC--CCCCCccc
Confidence 67788899999999999999975 88765543
No 469
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=46.48 E-value=31 Score=40.21 Aligned_cols=128 Identities=17% Similarity=0.208 Sum_probs=72.0
Q ss_pred HHhhcccCC--CCCeeEEEeccCcc---------cchHHHHhcC--CCEEEEccCCcccccHHHHHHHHHHcCCcEEEEE
Q 025927 106 VVDALRPVT--DLPLDVHLMIVEPE---------QRVPDFIKAG--ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL 172 (246)
Q Consensus 106 ~I~~ir~~t--~~plDvHLMV~~P~---------~~i~~~~~ag--ad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAl 172 (246)
.|+.+|+.+ +.|+-|-+|..+|. ++++.+.+.| +|.|+++.-.-..+....+++.+|+.|+++ +.|
T Consensus 471 ~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~-i~~ 549 (3089)
T 3zen_D 471 RIAELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVGISH-VVF 549 (3089)
T ss_dssp HHHHHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHHHCS-EEE
T ss_pred HHHHHHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcCCEE-EEE
Confidence 455566666 67888999999995 4788889999 778999853100123457788888888764 344
Q ss_pred cCCCChH--HHHHhhhh----cceEEEEeecCCCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 173 NPATSLS--AIECVLDV----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 173 nP~Tpve--~l~~~l~~----vD~VLvMsV~PGfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
.+.|.-+ .++..-.+ ++.|.+..++-| |.........-|-.....+.+ ..++-+.+=|||.-
T Consensus 550 ~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaG--GH~g~~~~~~ll~~~~~~ir~-~~~iPViaaGGI~d 617 (3089)
T 3zen_D 550 KPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAG--GHHSWEDLDDLLLATYSELRS-RSNITICVGGGIGT 617 (3089)
T ss_dssp CCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSS--EECCSCCHHHHHHHHHHHHTT-CTTEEEEEESSCCC
T ss_pred eCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcC--CCCCcccHHHHHHHHHHHHhh-cCCCeEEEEeCCCC
Confidence 5544322 23333221 224555555443 322222333333111122111 23456888999853
No 470
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=46.37 E-value=57 Score=27.44 Aligned_cols=85 Identities=11% Similarity=0.088 Sum_probs=54.0
Q ss_pred CCCCHHHHhhcccC-CCCCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 100 ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 100 ~tfgp~~I~~ir~~-t~~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
.+|.++.++.+|+. .+++. =+.+.....+.+.+.+.|++.+.++++.. .. .++++.+|++|+++-+.= .+++
T Consensus 133 ~Sf~~~~l~~~~~~~p~~~~--~~l~~~~~~~~~~~~~~~~~~i~~~~~~~--~~-~~~v~~~~~~G~~v~~wT-vn~~- 205 (248)
T 1zcc_A 133 FSFSEEMRQGLQSIAPEFRR--MMTLDIAKSPSLVGAVHHASIIEITPAQM--RR-PGIIEASRKAGLEIMVYY-GGDD- 205 (248)
T ss_dssp ECSCHHHHHHHHHHCTTSEE--EEEHHHHSSTHHHHHTTCCSEEEECHHHH--HS-HHHHHHHHHHTCEEEEEC-CCCC-
T ss_pred EECCHHHHHHHHHHCCCCcE--EEEecCCccHHHHHHHcCCCEEEecHHHh--CC-HHHHHHHHHCCCEEEEEC-CCCH-
Confidence 48999999999875 33432 22333222244555668999998887631 01 467899999999887653 3444
Q ss_pred HHHHH-hhh-hcceE
Q 025927 179 SAIEC-VLD-VVDLV 191 (246)
Q Consensus 179 e~l~~-~l~-~vD~V 191 (246)
+.+.. +++ -+|.|
T Consensus 206 ~~~~~~l~~~GvdgI 220 (248)
T 1zcc_A 206 MAVHREIATSDVDYI 220 (248)
T ss_dssp HHHHHHHHHSSCSEE
T ss_pred HHHHHHHHHcCCCEE
Confidence 55566 655 37763
No 471
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=46.35 E-value=38 Score=30.88 Aligned_cols=87 Identities=23% Similarity=0.173 Sum_probs=50.4
Q ss_pred CCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEE--ccCCc---ccccHHHHHHHHHH-cCCcEEEEEcCC
Q 025927 102 IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV--HCEQS---STIHLHRTLNQIKD-LGAKAGVVLNPA 175 (246)
Q Consensus 102 fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~--H~E~~---~~~~~~~~i~~Ik~-~G~k~GlAlnP~ 175 (246)
+..+.|+++++.+++|+-+-. +..|+ .++.+.++|+|.|.+ |--.. .... ...+..+++ .+. =|..+-+
T Consensus 212 ~~~~~i~~i~~~~~~Pv~vkg-v~t~e-~a~~a~~aGad~I~vs~~gg~~~d~~~~~-~~~l~~v~~~~~~--pVia~GG 286 (380)
T 1p4c_A 212 FNWEALRWLRDLWPHKLLVKG-LLSAE-DADRCIAEGADGVILSNHGGRQLDCAISP-MEVLAQSVAKTGK--PVLIDSG 286 (380)
T ss_dssp CCHHHHHHHHHHCCSEEEEEE-ECCHH-HHHHHHHTTCSEEEECCGGGTSCTTCCCG-GGTHHHHHHHHCS--CEEECSS
T ss_pred ccHHHHHHHHHhcCCCEEEEe-cCcHH-HHHHHHHcCCCEEEEcCCCCCcCCCCcCH-HHHHHHHHHHcCC--eEEEECC
Confidence 345788889888888888764 44444 577888999999999 64310 0011 223444443 233 2333333
Q ss_pred -CChHHHHHhhh-hcceEEE
Q 025927 176 -TSLSAIECVLD-VVDLVLI 193 (246)
Q Consensus 176 -Tpve~l~~~l~-~vD~VLv 193 (246)
...+++.+++. -+|.|.+
T Consensus 287 I~~~~dv~kal~~GAdaV~i 306 (380)
T 1p4c_A 287 FRRGSDIVKALALGAEAVLL 306 (380)
T ss_dssp CCSHHHHHHHHHTTCSCEEE
T ss_pred CCCHHHHHHHHHhCCcHhhe
Confidence 34455555554 3676655
No 472
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=46.20 E-value=1.4e+02 Score=26.01 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=64.2
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCC-------h----HHHHHhhhhcce---
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATS-------L----SAIECVLDVVDL--- 190 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-------v----e~l~~~l~~vD~--- 190 (246)
.+.+.++|++++.+ |-|- . +.+.+.+=++...++|+++=+.+.-... . ..++..++.++-
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (252)
T 2btm_A 79 PVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQV 158 (252)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHc
Confidence 45678888888776 3331 0 1222344466777899998777763311 1 223334443321
Q ss_pred -EEEEeecC----CCCCCcccHHHHHH-HHHHHHHHHhc-----CCCCeEEEeCCCChhhhhhcc
Q 025927 191 -VLIMSVNP----GFGGQSFIESQVKK-ISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 191 -VLvMsV~P----GfgGQ~F~~~~l~K-I~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~ 244 (246)
=++..-|| |- |..=.|+-.+. .+.+|+.+.+. .-+..|.-=|+|+.+|++++.
T Consensus 159 ~~~vIAYEPvWAIGT-G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~ 222 (252)
T 2btm_A 159 KQAVIAYEPIWAIGT-GKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFL 222 (252)
T ss_dssp TTCEEEECCGGGTTT-SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTTTHHHHH
T ss_pred CCEEEEECCHHHhCC-CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHH
Confidence 23668899 43 44444433332 23334443321 125789999999999999875
No 473
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=46.19 E-value=54 Score=29.97 Aligned_cols=51 Identities=20% Similarity=0.235 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCCEEEeee----ccCcccCC--CCCCHHHHhhcccCCCCCeeEEEec
Q 025927 73 GEQVKAVELAGCDWIHVDV----MDGRFVPN--ITIGPLVVDALRPVTDLPLDVHLMI 124 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDI----MDG~FVpN--~tfgp~~I~~ir~~t~~plDvHLMV 124 (246)
.++.+..+++|+..+ .++ -|-+|--. ..=+|+.+++|++.+++|+-.=.-+
T Consensus 27 ~e~A~~ae~aGA~aI-~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av~iPV~~K~ri 83 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAV-MALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAKCRI 83 (330)
T ss_dssp HHHHHHHHHHTCSEE-EECSSCHHHHC--CCCCCCCCHHHHHHHHHHCSSCEEEEEET
T ss_pred HHHHHHHHHcCCCEE-EecCCccccccCCcchhhcCCHHHHHHHHHhcCCCeEEEEee
Confidence 457788889999988 222 12222211 2227999999998888886654444
No 474
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=46.02 E-value=61 Score=28.05 Aligned_cols=161 Identities=15% Similarity=0.070 Sum_probs=87.2
Q ss_pred eeecccChhhHHHHHHHHHHcCCCEEEeeeccCccc--CCCCCC-HHHHhhccc----CCCCCeeEEEeccC---cc--c
Q 025927 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFV--PNITIG-PLVVDALRP----VTDLPLDVHLMIVE---PE--Q 129 (246)
Q Consensus 62 PSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FV--pN~tfg-p~~I~~ir~----~t~~plDvHLMV~~---P~--~ 129 (246)
.|.|.++..+- +.++.+...|+|++=+|.-|+..- .+-.-. ..+.+.++. ..+. .+-+=+.. |. .
T Consensus 9 rs~L~~p~~~~-~~~~~a~~~gaD~vilDlEdav~~~~~~k~~Ar~~v~~~l~~~~~~~~~~--~~~VRv~~~~~~~~~~ 85 (284)
T 1sgj_A 9 RSVLFAPGNRA-DLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAHDAARDLIAAAPHL--AVFVRVNALHSPYFED 85 (284)
T ss_dssp SEEEEEETTCH-HHHHHTTTTCCSEEEEESSTTSCSSHHHHHHHHHHHHHHHHHHHHHSTTS--EEEEECCCTTSTTHHH
T ss_pred ceEEEccCCCH-HHHHHHHhCCCCEEEEECCCCCCCchhhHHHHHHHHHHHHHhcccccCCC--eEEEEeCCCCCHhHHH
Confidence 45555554444 455666678999999999998653 110000 012222322 1111 12222222 22 1
Q ss_pred chHHHHhcCCCEEEEc-cCCcccccHHHHHHHHHHcC--CcEEEEEcCCCCh--HHHHHhhh--hcceEEE----EeecC
Q 025927 130 RVPDFIKAGADIVSVH-CEQSSTIHLHRTLNQIKDLG--AKAGVVLNPATSL--SAIECVLD--VVDLVLI----MSVNP 198 (246)
Q Consensus 130 ~i~~~~~agad~It~H-~E~~~~~~~~~~i~~Ik~~G--~k~GlAlnP~Tpv--e~l~~~l~--~vD~VLv----MsV~P 198 (246)
.+..+.+ |++.|.+. +|+ ..++..+.+.++..| ++++..| +|+- ..+++++. .+|.+.+ ++..=
T Consensus 86 dl~~~l~-g~~~i~lPkv~s--~~~v~~~~~~l~~~g~~~~i~~~I--Et~~av~~~~eIa~~~~vd~l~iG~~DL~~~l 160 (284)
T 1sgj_A 86 DLSVLTP-ELSGVVVPKLEM--GAEARQVAQMLQERSLPLPILAGL--ETGAGVWNAREIMEVPEVAWAYFGAEDYTTDL 160 (284)
T ss_dssp HGGGCCT-TSSEEEECSCCS--HHHHHHHHHHHHHTTCCCCEEEEE--CSHHHHHTHHHHHTSTTEEEEEECHHHHHHHH
T ss_pred HHHHHhc-cCCEEEeCCCCC--HHHHHHHHHHHHhcCCCeEEEEEe--cCHHHHHHHHHHHcCCCCcEEEECHHHHHHHh
Confidence 3555566 89988876 342 356667777777664 5555555 5554 66777763 4666555 22222
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeC
Q 025927 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG 233 (246)
Q Consensus 199 GfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDG 233 (246)
|..+++..+....-++++-......|+. . +||
T Consensus 161 g~~~~~~~~~~~~a~~~iv~aa~a~G~~--~-i~~ 192 (284)
T 1sgj_A 161 GGKRTPGGLEVLYARSQVALAARLTGVA--A-LDI 192 (284)
T ss_dssp TCCCCSSCGGGHHHHHHHHHHHHHHTCE--E-EEC
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHcCCC--e-eeC
Confidence 5545555566666666666666666653 2 675
No 475
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=45.86 E-value=72 Score=28.48 Aligned_cols=112 Identities=21% Similarity=0.147 Sum_probs=60.2
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCC--CCCeeEEEeccCcccchH--HHHhcCCCEE
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT--DLPLDVHLMIVEPEQRVP--DFIKAGADIV 142 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t--~~plDvHLMV~~P~~~i~--~~~~agad~I 142 (246)
.++..+.+.++.+++.|++.+=+==+=|.-.|+-. .+.++++|+.+ +.|+.+|.==..=..... .-+++||++|
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v--~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~v 223 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDI--RDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRV 223 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHH--HHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHH--HHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEE
Confidence 35666777777777778776543222333322211 23455556665 678888754332222222 3356788876
Q ss_pred EEcc----CCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhh
Q 025927 143 SVHC----EQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD 186 (246)
Q Consensus 143 t~H~----E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~ 186 (246)
--=+ |......++.++..+++.|...| -.++.|.++.+
T Consensus 224 d~tv~GlG~~aGN~~le~lv~~L~~~g~~~~------idl~~l~~~~~ 265 (345)
T 1nvm_A 224 DASLAGMGAGAGNAPLEVFIAVAERLGWNHG------TDLYTLMDAAD 265 (345)
T ss_dssp EEBGGGCSSTTCBCBHHHHHHHHHHHTCBCC------SCHHHHHHHHH
T ss_pred EecchhccCCccCcCHHHHHHHHHhcCCCCC------CCHHHHHHHHH
Confidence 5433 22123456777777777776543 45555555443
No 476
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=45.84 E-value=1.5e+02 Score=25.96 Aligned_cols=142 Identities=15% Similarity=0.180 Sum_probs=77.2
Q ss_pred cChhhHHHHHHHHHHcCCCEEEeeeccCcccCCC-CCC--------HHHHhhcccCCCCCeeEEEeccCcccchHHHHhc
Q 025927 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIG--------PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (246)
Q Consensus 67 aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~-tfg--------p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a 137 (246)
.|+...-+..+++.+.|+|+|=+=..-. =|.- ..+ .++|+.|++.++.|+.+ =+.+|+- ++.-.++
T Consensus 35 ~~~~~a~~~a~~~v~~GAdiIDIGgest--rPga~~v~~~eE~~rv~pvi~~l~~~~~~piSI--DT~~~~v-a~aAl~a 109 (282)
T 1aj0_A 35 NSLIDAVKHANLMINAGATIIDVGGEST--RPGAAEVSVEEELQRVIPVVEAIAQRFEVWISV--DTSKPEV-IRESAKV 109 (282)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSCC--STTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE--ECCCHHH-HHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcC--CCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEE--eCCCHHH-HHHHHHc
Confidence 4566777778888889999875544221 1221 011 23455555544556544 3456554 4566777
Q ss_pred CCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCC----------------hHHHHHhhhh-----cc--eEEEE
Q 025927 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS----------------LSAIECVLDV-----VD--LVLIM 194 (246)
Q Consensus 138 gad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp----------------ve~l~~~l~~-----vD--~VLvM 194 (246)
|+++|- ++-. . ...+.+..+++.|+.+-+.-+.++| .+.++..++. ++ .|
T Consensus 110 Ga~iIN-dvsg--~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~I--- 182 (282)
T 1aj0_A 110 GAHIIN-DIRS--L-SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKL--- 182 (282)
T ss_dssp TCCEEE-ETTT--T-CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGE---
T ss_pred CCCEEE-ECCC--C-CCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhE---
Confidence 999884 2221 1 1124677778888877666654443 2222222221 22 12
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHH
Q 025927 195 SVNPGFGGQSFIESQVKKISDLRRMC 220 (246)
Q Consensus 195 sV~PGfgGQ~F~~~~l~KI~~lr~l~ 220 (246)
-++||+|=-+-.+..++-++.++++.
T Consensus 183 ilDPg~gf~k~~~~n~~ll~~l~~~~ 208 (282)
T 1aj0_A 183 LLDPGFGFGKNLSHNYSLLARLAEFH 208 (282)
T ss_dssp EEECCTTSSCCHHHHHHHHHTGGGGG
T ss_pred EEeCCCCcccCHHHHHHHHHHHHHHh
Confidence 24687664555555666666666554
No 477
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=45.82 E-value=1.1e+02 Score=27.05 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=69.8
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCC-------h----HHHHHhhhhcce--E
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATS-------L----SAIECVLDVVDL--V 191 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-------v----e~l~~~l~~vD~--V 191 (246)
.+.+.++|++++.+ |.|- . +.+.+.+=++...++|+++=+.+.-... . ..++..|+.++- =
T Consensus 103 ~~mLkd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Ql~~~l~~v~~~~~ 182 (271)
T 3krs_A 103 CEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTEALKDVSDLSN 182 (271)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCCTT
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHHHHHHHhchHhhcC
Confidence 46778999998877 3331 0 1233444566778899998877763211 1 123334433321 2
Q ss_pred EEEeecCCC---CCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhcc
Q 025927 192 LIMSVNPGF---GGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 192 LvMsV~PGf---gGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~ 244 (246)
++..-||=| .|..-.|+-.+.+ +.+|+++.+. .-+..|.-=|+|+.+|+.++.
T Consensus 183 ~vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~ 244 (271)
T 3krs_A 183 LVIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELI 244 (271)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHH
T ss_pred EEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHh
Confidence 578889933 4666666665554 4556665432 113579999999999998874
No 478
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=45.78 E-value=40 Score=24.72 Aligned_cols=60 Identities=15% Similarity=0.158 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCcE---EEEEcCCCChHHHHHhhh--hcceEEEEeecCCCCCCcccHHHHHHH
Q 025927 154 LHRTLNQIKDLGAKA---GVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQVKKI 213 (246)
Q Consensus 154 ~~~~i~~Ik~~G~k~---GlAlnP~Tpve~l~~~l~--~vD~VLvMsV~PGfgGQ~F~~~~l~KI 213 (246)
+.++.+.+++.|+.+ -..+..+.|.+.+..+.. .+|+|.+=+-..|.-...|.-.+-+++
T Consensus 72 l~~~~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~v 136 (147)
T 3hgm_A 72 AVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRV 136 (147)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHH
T ss_pred HHHHHHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHH
Confidence 456667778889877 777778899999999988 688755543322322344566666555
No 479
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=45.75 E-value=1.3e+02 Score=26.13 Aligned_cols=113 Identities=15% Similarity=0.180 Sum_probs=66.2
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCC-------h----HHHHHhhhhcce---
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATS-------L----SAIECVLDVVDL--- 190 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tp-------v----e~l~~~l~~vD~--- 190 (246)
.+.+.++|++++.+ |.|- . +.+.+.+-++...++|+++=+.+.-... . ..++..++.++.
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (250)
T 2j27_A 80 LPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADW 159 (250)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGG
T ss_pred HHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHHHHhcCCHHHh
Confidence 46778899998876 4431 0 1233455666778899998777763211 1 122334443421
Q ss_pred -EEEEeecC----CCCCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhcc
Q 025927 191 -VLIMSVNP----GFGGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 191 -VLvMsV~P----GfgGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~ 244 (246)
=+++.-|| | .|..=.|+-.+.+ +.+|+.+.+. .-+..|.-=|+|+.+|++++.
T Consensus 160 ~~~vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~ 223 (250)
T 2j27_A 160 AKVVIAYEAVWAIG-TGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLY 223 (250)
T ss_dssp GGEEEEEECGGGTT-SSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHH
T ss_pred CCEEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHH
Confidence 25668899 5 3555455444433 3345544321 113578899999999998875
No 480
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.66 E-value=45 Score=32.76 Aligned_cols=133 Identities=14% Similarity=0.083 Sum_probs=0.0
Q ss_pred EeeeecccCh------------------hhHHHHHHHHHHcCCCEEEeeecc--------------------CcccCCCC
Q 025927 60 VSPSILSANF------------------AKLGEQVKAVELAGCDWIHVDVMD--------------------GRFVPNIT 101 (246)
Q Consensus 60 IsPSIl~aD~------------------~~l~~~i~~l~~~g~d~lHiDIMD--------------------G~FVpN~t 101 (246)
++||-..... ..+.+..+++.++|.|.+-+-.-- |.+-...-
T Consensus 121 ~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r 200 (729)
T 1o94_A 121 RGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRAR 200 (729)
T ss_dssp EESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTH
T ss_pred cCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhH
Q ss_pred CCHHHHhhcccCC--CCCeeEEEe------------ccCcccchHHHHhcCCCEEEEccCC-------------cccccH
Q 025927 102 IGPLVVDALRPVT--DLPLDVHLM------------IVEPEQRVPDFIKAGADIVSVHCEQ-------------SSTIHL 154 (246)
Q Consensus 102 fgp~~I~~ir~~t--~~plDvHLM------------V~~P~~~i~~~~~agad~It~H~E~-------------~~~~~~ 154 (246)
|--++++++|+.. ++|+-+-|= .++...+.+.+.+ ++|.+.+|.=. ......
T Consensus 201 ~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~ 279 (729)
T 1o94_A 201 FWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHT 279 (729)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTT
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCcccc
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhh--cceEEE
Q 025927 155 HRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLVLI 193 (246)
Q Consensus 155 ~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~--vD~VLv 193 (246)
..++..+|+.=-.+=++..-=++.+..+++|.. +|+|.+
T Consensus 280 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 280 IPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp HHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEE
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEe
No 481
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=45.58 E-value=33 Score=31.29 Aligned_cols=115 Identities=18% Similarity=0.168 Sum_probs=69.4
Q ss_pred HHHHHHHHHcCCCEEEeeeccCccc-----C--CC---C----------CCHHHHhhcccCCCC-CeeEEEeccC-----
Q 025927 73 GEQVKAVELAGCDWIHVDVMDGRFV-----P--NI---T----------IGPLVVDALRPVTDL-PLDVHLMIVE----- 126 (246)
Q Consensus 73 ~~~i~~l~~~g~d~lHiDIMDG~FV-----p--N~---t----------fgp~~I~~ir~~t~~-plDvHLMV~~----- 126 (246)
.+..+++.++|.|.+-+..--|... | |- . |--++|+++|+..+- |+-+-|=..+
T Consensus 156 ~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~ 235 (362)
T 4ab4_A 156 RSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDM 235 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSC
T ss_pred HHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccccccc
Confidence 3445666788999887776543222 2 21 1 446889999886432 6666554332
Q ss_pred ----c----ccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHc-CCcEEEEEcCCCChHHHHHhhhh--cceEEE
Q 025927 127 ----P----EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV--VDLVLI 193 (246)
Q Consensus 127 ----P----~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~-G~k~GlAlnP~Tpve~l~~~l~~--vD~VLv 193 (246)
+ ..+++.+.++|+|+|.+|.-.. .. .+++.||+. ++. |..+-+...+..+.+|.. +|+|.+
T Consensus 236 ~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-~~---~~~~~ik~~~~iP--vi~~Ggit~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 236 GDADRAETFTYVARELGKRGIAFICSREREA-DD---SIGPLIKEAFGGP--YIVNERFDKASANAALASGKADAVAF 307 (362)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSEEEEECCCC-TT---CCHHHHHHHHCSC--EEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEECCCCC-CH---HHHHHHHHHCCCC--EEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 1 2345567778999999996421 11 245566654 332 334444577888888865 898765
No 482
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=45.29 E-value=14 Score=32.43 Aligned_cols=91 Identities=15% Similarity=0.129 Sum_probs=57.0
Q ss_pred ecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCC----CCCCHHHHhhcccCCCC--CeeEEEeccCc---ccchHHH
Q 025927 64 ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN----ITIGPLVVDALRPVTDL--PLDVHLMIVEP---EQRVPDF 134 (246)
Q Consensus 64 Il~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN----~tfgp~~I~~ir~~t~~--plDvHLMV~~P---~~~i~~~ 134 (246)
++++|+.++++-++.+++.+ +++| + -|=++ ..+|++.++.|++. ++ .+|.=+ -.=| ..+++.+
T Consensus 8 ivALD~~~~~~al~l~~~l~-~~v~----~-~~KvG~~l~~~~G~~~v~~Lk~~-g~~VflDlK~-~DIpnTv~~a~~~~ 79 (259)
T 3tfx_A 8 IVALDLDNEEQLNKILSKLG-DPHD----V-FVKVGMELFYNAGIDVIKKLTQQ-GYKIFLDLKM-HDIPNTVYNGAKAL 79 (259)
T ss_dssp EEECCCSCHHHHHHHHHTTC-CGGG----C-EEEECHHHHHHHCHHHHHHHHHT-TCEEEEEEEE-CSCHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHhC-cccc----e-EEEeCHHHHHhcCHHHHHHHHHC-CCcEEEEecc-cccchHHHHHHHHH
Confidence 57789999988888887753 2211 1 12223 36799999999875 44 455544 2223 2456788
Q ss_pred HhcCCCEEEEccCCcccccHHHHHHHHHH
Q 025927 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKD 163 (246)
Q Consensus 135 ~~agad~It~H~E~~~~~~~~~~i~~Ik~ 163 (246)
.+.|+|++|+|.=. ...-+...++..++
T Consensus 80 ~~~gad~vTVh~~~-G~~~~~aa~~~~~~ 107 (259)
T 3tfx_A 80 AKLGITFTTVHALG-GSQMIKSAKDGLIA 107 (259)
T ss_dssp HTTTCSEEEEEGGG-CHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEcCCC-CHHHHHHHHHHHHH
Confidence 88999999999853 12224444555544
No 483
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=45.12 E-value=80 Score=26.69 Aligned_cols=104 Identities=19% Similarity=0.153 Sum_probs=58.9
Q ss_pred ccchHHHHhcCCCEEEEccCCccc---ccHHHHHHHHHHcCCcEEEEE------cCCCC--------hHHHHHhhhh---
Q 025927 128 EQRVPDFIKAGADIVSVHCEQSST---IHLHRTLNQIKDLGAKAGVVL------NPATS--------LSAIECVLDV--- 187 (246)
Q Consensus 128 ~~~i~~~~~agad~It~H~E~~~~---~~~~~~i~~Ik~~G~k~GlAl------nP~Tp--------ve~l~~~l~~--- 187 (246)
+. ++...++|.+.|-+....... ..+.++.+.+++.|+++.... +...+ ++.++..++.
T Consensus 40 ~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~ 118 (309)
T 2hk0_A 40 PY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAK 118 (309)
T ss_dssp HH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45 888888999999887542101 346778888899999987632 22222 2344444443
Q ss_pred --cceEEEEeecC-CCC-CCc-c----cHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 025927 188 --VDLVLIMSVNP-GFG-GQS-F----IESQVKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 188 --vD~VLvMsV~P-Gfg-GQ~-F----~~~~l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
+..|.+.+-.| |.. +.. . .....+.++++-++..+.|..+-+|--
T Consensus 119 lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 172 (309)
T 2hk0_A 119 LDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVL 172 (309)
T ss_dssp TTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeec
Confidence 44554211001 321 111 2 234456666666777777776667754
No 484
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=44.29 E-value=1.3e+02 Score=25.29 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=29.5
Q ss_pred CcccchHHHHhcCCCEEEEccCCc-----ccccHHHHHHHHHHcCCcEEE
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDLGAKAGV 170 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~~-----~~~~~~~~i~~Ik~~G~k~Gl 170 (246)
.+...++...++|.+.|-+..... ....+.++.+.+++.|+++..
T Consensus 37 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 445667777888888887765310 023456677778888888743
No 485
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=44.26 E-value=85 Score=28.14 Aligned_cols=127 Identities=10% Similarity=0.047 Sum_probs=0.0
Q ss_pred CCCcEEeeeecccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEec--------cC
Q 025927 55 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMI--------VE 126 (246)
Q Consensus 55 ~~~~~IsPSIl~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV--------~~ 126 (246)
+..+...-++-..+...+.++.+++.+.|.+.+=+.+-. ++.+..+.++++|+..+ |+.||+ ++
T Consensus 134 ~~~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~-----~~~~~~e~v~avr~a~g---d~~l~vD~n~~~~~~~ 205 (384)
T 2pgw_A 134 RKAVGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR-----GEKLDLEITAAVRGEIG---DARLRLDANEGWSVHD 205 (384)
T ss_dssp SSEEEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS-----CHHHHHHHHHHHHTTST---TCEEEEECTTCCCHHH
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC-----CHHHHHHHHHHHHHHcC---CcEEEEecCCCCCHHH
Q ss_pred cccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhh--hhcceEEE
Q 025927 127 PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL--DVVDLVLI 193 (246)
Q Consensus 127 P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l--~~vD~VLv 193 (246)
-.++.+.+.+.|.++|--.+. .+-...++.+|+.---+=++=.--+..+.++.++ ..+|+|.+
T Consensus 206 a~~~~~~l~~~~i~~iEqP~~----~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 206 AINMCRKLEKYDIEFIEQPTV----SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp HHHHHHHHGGGCCSEEECCSC----TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHhcCCCEEeCCCC----hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
No 486
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=44.24 E-value=1.7e+02 Score=25.80 Aligned_cols=126 Identities=17% Similarity=0.145 Sum_probs=69.6
Q ss_pred ccChhhHHHHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhc--CCCEEE
Q 025927 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS 143 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~a--gad~It 143 (246)
..|+..+++.++.+.+.|++.+=+==.=|.| .++..+.-+++ ++..++. |---|.
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~---~~Ls~~Er~~v--------------------~~~~~~~~~grvpVi 80 (311)
T 3h5d_A 24 SINFDAIPALIEHLLAHHTDGILLAGTTAES---PTLTHDEELEL--------------------FAAVQKVVNGRVPLI 80 (311)
T ss_dssp SBCTTHHHHHHHHHHHTTCCCEEESSTTTTG---GGSCHHHHHHH--------------------HHHHHHHSCSSSCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCh---hhCCHHHHHHH--------------------HHHHHHHhCCCCcEE
Confidence 6899999999999999998866443333333 44554433332 2222222 112344
Q ss_pred EccCCcccccHHHHHHHHHHcCC-cEEEEEcCCC---ChHHHHH----hhhhcceEEEEeecCCCCCCcccHHHHHHHH
Q 025927 144 VHCEQSSTIHLHRTLNQIKDLGA-KAGVVLNPAT---SLSAIEC----VLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (246)
Q Consensus 144 ~H~E~~~~~~~~~~i~~Ik~~G~-k~GlAlnP~T---pve~l~~----~l~~vD~VLvMsV~PGfgGQ~F~~~~l~KI~ 214 (246)
.+.=+.++.+..+..+..++.|. .+-+++.|.- +-+.+.. +.+.+|+=+++==.||..|..+.++++.++.
T Consensus 81 aGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (311)
T 3h5d_A 81 AGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLA 159 (311)
T ss_dssp EECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHh
Confidence 45433223444455566666665 6666666651 1122222 2334455444444577778888888776664
No 487
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=44.22 E-value=28 Score=30.13 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=46.8
Q ss_pred EEEeccCccc-----chHHHHhcCCCEEEEccCC-cccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEE
Q 025927 120 VHLMIVEPEQ-----RVPDFIKAGADIVSVHCEQ-SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 120 vHLMV~~P~~-----~i~~~~~agad~It~H~E~-~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLv 193 (246)
.|++.-+|.. .++.+.++|+|.|-+=.-. ...++..++++.+|+ ..+=+.|-|... .++-..+|.+++
T Consensus 10 ~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~--~~~Pivlm~y~~----n~i~~G~dg~ii 83 (240)
T 1viz_A 10 KHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR--FLVPCVLEVSAI----EAIVPGFDLYFI 83 (240)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT--SSSCEEEECSCG----GGCCSCCSEEEE
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC--cCCCEEEecCcc----ccccCCCCEEEE
Confidence 4788888865 6778899999998877632 112346677777776 344455544332 222456778888
Q ss_pred EeecCC
Q 025927 194 MSVNPG 199 (246)
Q Consensus 194 MsV~PG 199 (246)
+.+.+.
T Consensus 84 PdLp~e 89 (240)
T 1viz_A 84 PSVLNS 89 (240)
T ss_dssp EEETTB
T ss_pred cccCcc
Confidence 877764
No 488
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=44.13 E-value=1.4e+02 Score=24.88 Aligned_cols=97 Identities=13% Similarity=0.222 Sum_probs=54.3
Q ss_pred HHHHhcCCCEEEEccCCcc-----cccHHHHHHHHHHcCCcEEEEE---cCCCChHHHHHhhhh-----cceEEEEeecC
Q 025927 132 PDFIKAGADIVSVHCEQSS-----TIHLHRTLNQIKDLGAKAGVVL---NPATSLSAIECVLDV-----VDLVLIMSVNP 198 (246)
Q Consensus 132 ~~~~~agad~It~H~E~~~-----~~~~~~~i~~Ik~~G~k~GlAl---nP~Tpve~l~~~l~~-----vD~VLvMsV~P 198 (246)
+...+.|+|.|-++..... .....+.++.+++..-.+-+-+ .|..+.+.+..+... +|+| -++-
T Consensus 77 ~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I---~tst 153 (225)
T 1mzh_A 77 VEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFI---KTST 153 (225)
T ss_dssp HHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEE---ECCC
T ss_pred HHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEE---EECC
Confidence 3456789999998875321 1223456777776542334444 455444444444332 8998 3444
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCh
Q 025927 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (246)
Q Consensus 199 GfgGQ~F~~~~l~KI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (246)
||..... +++-++.+++.. +-+..|-.-|||+.
T Consensus 154 g~~~gga---~~~~i~~v~~~v---~~~ipVia~GGI~t 186 (225)
T 1mzh_A 154 GFAPRGT---TLEEVRLIKSSA---KGRIKVKASGGIRD 186 (225)
T ss_dssp SCSSSCC---CHHHHHHHHHHH---TTSSEEEEESSCCS
T ss_pred CCCCCCC---CHHHHHHHHHHh---CCCCcEEEECCCCC
Confidence 7632112 344445555543 22467889999973
No 489
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=44.12 E-value=1.7e+02 Score=25.94 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=64.4
Q ss_pred hHHHHhcCCCEEEE-cc-------CCcccccHHHHHHHHHHcCCcEEEEEcCC-------CChHH----HHHhhhh-cc-
Q 025927 131 VPDFIKAGADIVSV-HC-------EQSSTIHLHRTLNQIKDLGAKAGVVLNPA-------TSLSA----IECVLDV-VD- 189 (246)
Q Consensus 131 i~~~~~agad~It~-H~-------E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-------Tpve~----l~~~l~~-vD- 189 (246)
.+.+.++|++++.+ |. |+ .+.+.+=++...++|+++=+.+.-. ...+. ++..|+. .+
T Consensus 105 ~~mLkd~G~~~VIiGHSERR~~f~Et--de~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Ql~~~l~~~~~~ 182 (275)
T 3kxq_A 105 AFMLKEAGASHVIIGHSERRTVYQES--DAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATA 182 (275)
T ss_dssp HHHHHHHTCSEEEESCHHHHHHTCCC--HHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHSCTTCCT
T ss_pred HHHHHHcCCCEEEECchhhccccCCC--HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHHHHHHHcCCccc
Confidence 56788999998887 33 42 2334444567788999988877632 11122 3333332 11
Q ss_pred eEEEEeecCCC---CCCcccHHHHHH-HHHHHHHHHh----cCCCCeEEEeCCCChhhhhhccc
Q 025927 190 LVLIMSVNPGF---GGQSFIESQVKK-ISDLRRMCLE----KGVNPWIEVDGGVGPKNAYKVPN 245 (246)
Q Consensus 190 ~VLvMsV~PGf---gGQ~F~~~~l~K-I~~lr~l~~~----~~~~~~I~VDGGI~~e~i~~l~~ 245 (246)
-=+|..=||=| .|..=-|+-.+. .+.+|+++.+ ..-+..|.-=|+++.+|++++..
T Consensus 183 ~~vVIAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV~~~Na~el~~ 246 (275)
T 3kxq_A 183 ENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSVKPSNAFELLS 246 (275)
T ss_dssp TTEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCCCTTTHHHHHT
T ss_pred CCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCcCHhHHHHHHc
Confidence 12578889944 355544443333 2333444432 12346799999999999998854
No 490
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=44.01 E-value=1.6e+02 Score=25.62 Aligned_cols=112 Identities=13% Similarity=0.214 Sum_probs=66.6
Q ss_pred hHHHHhcCCCEEEE-ccCC---c--ccccHHHHHHHHHHcCCcEEEEEcCCCChH-------------HHHHhhhhcce-
Q 025927 131 VPDFIKAGADIVSV-HCEQ---S--STIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVVDL- 190 (246)
Q Consensus 131 i~~~~~agad~It~-H~E~---~--~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve-------------~l~~~l~~vD~- 190 (246)
.+.+.++|++++.+ |.|- . +.+.+.+=++...++|+++=+.+.- +++ .+...+..++-
T Consensus 83 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlCvGE--tleere~g~t~~vv~~Ql~~~l~~~~~~ 160 (254)
T 3m9y_A 83 PVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGE--TDEERESGKANDVVGEQVKKAVAGLSED 160 (254)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHHCCCHHHHHHHHHHHHHhcCCHH
Confidence 45678889998876 4331 0 1223444456678899998777763 332 34444544431
Q ss_pred ---EEEEeecCCC---CCCcccHHHHHHH-HHHHHHHHhc-----CCCCeEEEeCCCChhhhhhcc
Q 025927 191 ---VLIMSVNPGF---GGQSFIESQVKKI-SDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVP 244 (246)
Q Consensus 191 ---VLvMsV~PGf---gGQ~F~~~~l~KI-~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~l~ 244 (246)
=++..-||=+ .|..--|+-.+.+ +.+|+.+.+. .-+..|.-=|+|+.+|++++.
T Consensus 161 ~~~~vvIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~ 226 (254)
T 3m9y_A 161 QLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYM 226 (254)
T ss_dssp HHHHCEEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHH
T ss_pred HhCCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHH
Confidence 1356889932 4666555555442 2345554321 235789999999999999875
No 491
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=43.87 E-value=61 Score=28.65 Aligned_cols=83 Identities=12% Similarity=0.155 Sum_probs=56.1
Q ss_pred HHHhhcccCCC-CCeeEEEeccCcccchHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHH
Q 025927 105 LVVDALRPVTD-LPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC 183 (246)
Q Consensus 105 ~~I~~ir~~t~-~plDvHLMV~~P~~~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~ 183 (246)
..+++.|+... .++.| -|.+.+ -+++..++|+|+|-+|-= +.+++.+.++.+++.+.++-+...-+-..+.+..
T Consensus 183 ~av~~ar~~~~~~~I~V--ev~t~e-ea~eal~aGaD~I~LDn~--~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~ 257 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV--EVDSLE-QLDAVLPEKPELILLDNF--AVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAAT 257 (284)
T ss_dssp HHHHHHHHHCTTSCEEE--EESSHH-HHHHHGGGCCSEEEEETC--CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHH
T ss_pred HHHHHHHHhCCCCCEEE--EeCCHH-HHHHHHHcCCCEEEECCC--CHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHH
Confidence 45666665422 13333 333553 345567789999999863 2456667788888766667788888888899999
Q ss_pred hhhh-cceEE
Q 025927 184 VLDV-VDLVL 192 (246)
Q Consensus 184 ~l~~-vD~VL 192 (246)
|... +|+|-
T Consensus 258 ~a~tGVD~is 267 (284)
T 1qpo_A 258 YAETGVDYLA 267 (284)
T ss_dssp HHHTTCSEEE
T ss_pred HHhcCCCEEE
Confidence 8876 88875
No 492
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=43.65 E-value=28 Score=31.45 Aligned_cols=101 Identities=21% Similarity=0.275 Sum_probs=74.5
Q ss_pred hhhHHHHHHHHHHcCCCEEEeeecc--CcccC--CCCCCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEE
Q 025927 69 FAKLGEQVKAVELAGCDWIHVDVMD--GRFVP--NITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (246)
Q Consensus 69 ~~~l~~~i~~l~~~g~d~lHiDIMD--G~FVp--N~tfgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~ 144 (246)
+.+.++-.+.+++.|+|+|=+=|=- |.|-| +-.+.++.+++|++.+++|+..|==.+=|..|++.+.+.|.++
T Consensus 152 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~--- 228 (305)
T 1rvg_A 152 LTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEI--- 228 (305)
T ss_dssp CCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCC---
T ss_pred cCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhcccc---
Confidence 4666777777788899999877644 55763 4678889999999988899999999999999999999999876
Q ss_pred ccCCcccccHHHHHHHHHHcCCcEEEEEcCCCCh
Q 025927 145 HCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (246)
Q Consensus 145 H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpv 178 (246)
.++. .-+.+.+++.-++|+. =+|-+|.+
T Consensus 229 -~~~~--G~p~e~i~~ai~~GV~---KiNi~Tdl 256 (305)
T 1rvg_A 229 -GEAA--GIHPEDIKKAISLGIA---KINTDTDL 256 (305)
T ss_dssp -CSCB--CCCHHHHHHHHHTTEE---EEEECHHH
T ss_pred -ccCC--CCCHHHHHHHHHCCCe---EEEEChHH
Confidence 3432 2233455555556632 25666765
No 493
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=43.37 E-value=58 Score=29.46 Aligned_cols=126 Identities=20% Similarity=0.172 Sum_probs=70.8
Q ss_pred ccChhhHHHHHHHHHHcCCCEE--Eeeecc--------------------CcccC----------------------CCC
Q 025927 66 SANFAKLGEQVKAVELAGCDWI--HVDVMD--------------------GRFVP----------------------NIT 101 (246)
Q Consensus 66 ~aD~~~l~~~i~~l~~~g~d~l--HiDIMD--------------------G~FVp----------------------N~t 101 (246)
..|.....+.+++++++|++.+ ++|.-- ++|+. +-.
T Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~ 211 (370)
T 1gox_A 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRS 211 (370)
T ss_dssp BSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTT
T ss_pred CCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCcc
Confidence 5567777788999999999985 444210 01111 113
Q ss_pred CCHHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEEEE--ccCC-c-ccccHHHHHHHHHHc-CCcEEEEEcCC-
Q 025927 102 IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV--HCEQ-S-STIHLHRTLNQIKDL-GAKAGVVLNPA- 175 (246)
Q Consensus 102 fgp~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~It~--H~E~-~-~~~~~~~~i~~Ik~~-G~k~GlAlnP~- 175 (246)
+..+.|+++++.+++|+-+-. +..|+ .++.+.++|+|.|.+ |--. . ........+..+++. +-++=|..+-+
T Consensus 212 ~~~~~i~~l~~~~~~pv~vK~-~~~~e-~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI 289 (370)
T 1gox_A 212 LSWKDVAWLQTITSLPILVKG-VITAE-DARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGV 289 (370)
T ss_dssp CCHHHHHHHHHHCCSCEEEEC-CCSHH-HHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSC
T ss_pred chHHHHHHHHHHhCCCEEEEe-cCCHH-HHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCC
Confidence 445678888887788876533 34444 467788899999998 5310 0 011223455555542 11233333333
Q ss_pred CChHHHHHhhhh-cceEEE
Q 025927 176 TSLSAIECVLDV-VDLVLI 193 (246)
Q Consensus 176 Tpve~l~~~l~~-vD~VLv 193 (246)
..-+++.+++.. +|.|.+
T Consensus 290 ~~~~D~~k~l~~GAdaV~i 308 (370)
T 1gox_A 290 RRGTDVFKALALGAAGVFI 308 (370)
T ss_dssp CSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHcCCCEEee
Confidence 334455555443 777766
No 494
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=43.02 E-value=35 Score=28.37 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=56.0
Q ss_pred CcccchHHHHhcCCCEEEEccCC------cccccHHHHHHHHHHcCCcEEEEEcCCC--C--------hHHHHHhhhh--
Q 025927 126 EPEQRVPDFIKAGADIVSVHCEQ------SSTIHLHRTLNQIKDLGAKAGVVLNPAT--S--------LSAIECVLDV-- 187 (246)
Q Consensus 126 ~P~~~i~~~~~agad~It~H~E~------~~~~~~~~~i~~Ik~~G~k~GlAlnP~T--p--------ve~l~~~l~~-- 187 (246)
.++..++..+++|.+.|-+.... .....+.++.+.+++.|+++-. ++|.. + ++.++..++.
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~A~ 94 (286)
T 3dx5_A 16 SFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITM-ISDYLDISLSADFEKTIEKCEQLAILAN 94 (286)
T ss_dssp CHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEE-EECCCCCSTTSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEE-EecCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 34566777788888888774210 0113456667777888888753 33322 1 2333444432
Q ss_pred ---cceEEEEeecCCCCCCc-c----cHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 025927 188 ---VDLVLIMSVNPGFGGQS-F----IESQVKKISDLRRMCLEKGVNPWIEVD 232 (246)
Q Consensus 188 ---vD~VLvMsV~PGfgGQ~-F----~~~~l~KI~~lr~l~~~~~~~~~I~VD 232 (246)
++.|.+ .||..+.. . .....+.++++-++..+.|..+-+|--
T Consensus 95 ~lG~~~v~~---~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 95 WFKTNKIRT---FAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp HHTCCEEEE---CSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HhCCCEEEE---cCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecC
Confidence 344433 45654321 1 234455566666666677776666654
No 495
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=42.88 E-value=35 Score=29.46 Aligned_cols=134 Identities=18% Similarity=0.125 Sum_probs=0.0
Q ss_pred CCCCcEEeeeecccChhh--HH------HHHHHHHHcCCCEEEeeeccCcccCCCCCCHHHHhhcccC---CCCC---ee
Q 025927 54 SKSDIIVSPSILSANFAK--LG------EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLP---LD 119 (246)
Q Consensus 54 ~~~~~~IsPSIl~aD~~~--l~------~~i~~l~~~g~d~lHiDIMDG~FVpN~tfgp~~I~~ir~~---t~~p---lD 119 (246)
++.++-+++..+..++.. ++ +.++.+.+.|.+.+-+-.-+++.. ...+.+..++++++. .++. +.
T Consensus 7 ~~mklg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~-~~~~~~~~~~~l~~~l~~~gL~~~~i~ 85 (335)
T 2qw5_A 7 ATSDIYISFFMFTTNLQPDNLDYRRIVVAHIKKLQRFGYSGFEFPIAPGLPE-NYAQDLENYTNLRHYLDSEGLENVKIS 85 (335)
T ss_dssp CCCCEEEEGGGTCSCCCTTCHHHHHHHHHHHHHHHHTTCCEEEEECCCCCGG-GHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred hhcceeEEEeeecCCCChhhhhccchHHHHHHHHHHhCCCEEEEecCCCccc-ccccchHHHHHHHHHHHHCCCCcceeE
Q ss_pred --EEEe----------------ccCcccchHHHHhcCCCEEEEc--------------------------cCCc---ccc
Q 025927 120 --VHLM----------------IVEPEQRVPDFIKAGADIVSVH--------------------------CEQS---STI 152 (246)
Q Consensus 120 --vHLM----------------V~~P~~~i~~~~~agad~It~H--------------------------~E~~---~~~ 152 (246)
+|+- ++.-.+.++...+.|+++| +| .|.. ..+
T Consensus 86 ~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (335)
T 2qw5_A 86 TNVGATRTFDPSSNYPEQRQEALEYLKSRVDITAALGGEIM-MGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQP 164 (335)
T ss_dssp EECCCCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEE-EECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE-eccccCccccccCCcccccccccchhhhHHHHHHHHHH
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCC------CChHHHHHhhhhcc
Q 025927 153 HLHRTLNQIKDLGAKAGVVLNPA------TSLSAIECVLDVVD 189 (246)
Q Consensus 153 ~~~~~i~~Ik~~G~k~GlAlnP~------Tpve~l~~~l~~vD 189 (246)
.+.++.+..++.|++.++=-.+. ...+.+..+++.+|
T Consensus 165 ~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~t~~~~~~ll~~v~ 207 (335)
T 2qw5_A 165 ILDKLGEYAEIKKVKLAIEPITHWETPGPNKLSQLIEFLKGVK 207 (335)
T ss_dssp HHHHHHHHHHHHTCEEEECCCCTTTCSSCCSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCEEEEeeCCcccccccCCHHHHHHHHHhcC
No 496
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=42.56 E-value=43 Score=30.06 Aligned_cols=70 Identities=27% Similarity=0.389 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCCEEEeeecc-----CcccCCC---C--CC-HHHHhhcccCCCCCeeEEEeccCcccchHHHHhcCCCEE
Q 025927 74 EQVKAVELAGCDWIHVDVMD-----GRFVPNI---T--IG-PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (246)
Q Consensus 74 ~~i~~l~~~g~d~lHiDIMD-----G~FVpN~---t--fg-p~~I~~ir~~t~~plDvHLMV~~P~~~i~~~~~agad~I 142 (246)
++++.+++.|+|++.++=.. |.+.+.. . ++ ...++++++..++|+-+===+.+|+. +..+.+.|||.|
T Consensus 156 ~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~-~~~~l~~GAd~V 234 (369)
T 3bw2_A 156 EEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQ-IAAVLAAGADAA 234 (369)
T ss_dssp HHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHH-HHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHH-HHHHHHcCCCEE
Confidence 35678888999999997543 3343321 1 55 67788887755666533222456665 445566899988
Q ss_pred EE
Q 025927 143 SV 144 (246)
Q Consensus 143 t~ 144 (246)
.+
T Consensus 235 ~v 236 (369)
T 3bw2_A 235 QL 236 (369)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 497
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=42.52 E-value=21 Score=33.24 Aligned_cols=88 Identities=14% Similarity=0.148 Sum_probs=50.9
Q ss_pred cEEeeeec-----ccChhhHHHHHHHHHH-cCCCEEEeeeccCc---cc-C--CCCCCHHHHhhcccCC--CCCeeEEEe
Q 025927 58 IIVSPSIL-----SANFAKLGEQVKAVEL-AGCDWIHVDVMDGR---FV-P--NITIGPLVVDALRPVT--DLPLDVHLM 123 (246)
Q Consensus 58 ~~IsPSIl-----~aD~~~l~~~i~~l~~-~g~d~lHiDIMDG~---FV-p--N~tfgp~~I~~ir~~t--~~plDvHLM 123 (246)
++|||.=. ..+..+..+-++.|++ +|+|+||+--.+.. +- + .-.+..+.++.+|+.. ++|+-+==-
T Consensus 247 vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~Gg 326 (419)
T 3l5a_A 247 FRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGG 326 (419)
T ss_dssp EEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSS
T ss_pred EecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECC
Confidence 56777322 1234556667788899 99999998654420 11 1 0112345677887754 466433222
Q ss_pred ccCcccchHHHHhcCCCEEEEccC
Q 025927 124 IVEPEQRVPDFIKAGADIVSVHCE 147 (246)
Q Consensus 124 V~~P~~~i~~~~~agad~It~H~E 147 (246)
+.+|+.-.+ .++. +|.|.+=-.
T Consensus 327 I~t~e~Ae~-~L~~-aDlVaiGR~ 348 (419)
T 3l5a_A 327 INSPESALD-ALQH-ADMVGMSSP 348 (419)
T ss_dssp CCSHHHHHH-HGGG-CSEEEESTH
T ss_pred CCCHHHHHH-HHHh-CCcHHHHHH
Confidence 356666544 4444 999998543
No 498
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=42.50 E-value=55 Score=29.29 Aligned_cols=136 Identities=7% Similarity=0.048 Sum_probs=0.0
Q ss_pred CCCCcEEeeeecccCh-------------hhHHHHHHHHHHcCCCEEEeeeccC-cccCCC---CCCHHHHhhcccCCCC
Q 025927 54 SKSDIIVSPSILSANF-------------AKLGEQVKAVELAGCDWIHVDVMDG-RFVPNI---TIGPLVVDALRPVTDL 116 (246)
Q Consensus 54 ~~~~~~IsPSIl~aD~-------------~~l~~~i~~l~~~g~d~lHiDIMDG-~FVpN~---tfgp~~I~~ir~~t~~ 116 (246)
++.+.++|.++++.-. ..+.+.++.+.+.|.+.+-+-..|- .+.++. .-.+..++++-+-.++
T Consensus 4 ~~~~~k~~~~~w~~~~~~~~~fg~~t~~~~~~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL 83 (386)
T 1muw_A 4 PTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGM 83 (386)
T ss_dssp CCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCccceEeeecccccCCCCCcccCCCCCCCCHHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCC
Q ss_pred CeeEEEe------------ccCcc------------cchHHHHhcCCCEEEEccCCcc----------------cccHHH
Q 025927 117 PLDVHLM------------IVEPE------------QRVPDFIKAGADIVSVHCEQSS----------------TIHLHR 156 (246)
Q Consensus 117 plDvHLM------------V~~P~------------~~i~~~~~agad~It~H~E~~~----------------~~~~~~ 156 (246)
.+..|-. ...|. +.++...+.|++.|.+|.-... .+.+.+
T Consensus 84 ~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~ 163 (386)
T 1muw_A 84 TVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDL 163 (386)
T ss_dssp BCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHH
T ss_pred eEEEEecccccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHH
Q ss_pred HHHHHHHcC--CcEEEEEcCC--------CChHHHHHhhhhcc
Q 025927 157 TLNQIKDLG--AKAGVVLNPA--------TSLSAIECVLDVVD 189 (246)
Q Consensus 157 ~i~~Ik~~G--~k~GlAlnP~--------Tpve~l~~~l~~vD 189 (246)
+....++.| +++++=-.|. ...+.+..+++.+|
T Consensus 164 l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~t~~~~~~li~~v~ 206 (386)
T 1muw_A 164 LGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLE 206 (386)
T ss_dssp HHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSS
T ss_pred HHHHHHhcCCCeEEEEeeCCCCCcccccCCCHHHHHHHHHHhC
No 499
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=42.46 E-value=36 Score=29.03 Aligned_cols=54 Identities=15% Similarity=0.227 Sum_probs=39.4
Q ss_pred cCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCCCChHHHHHhhhhcceEEE
Q 025927 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (246)
Q Consensus 137 agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~Tpve~l~~~l~~vD~VLv 193 (246)
.+++.+.+-.+. ..+...++++..|+.|.+ ++++|....+.+.++++.+|++..
T Consensus 130 ~~~~~v~~~g~~-~~~~~~~~~~~a~~~g~~--v~~D~~~~~~~~~~ll~~~dil~~ 183 (299)
T 3ikh_A 130 VAGDILLQQGNF-SLDKTRALFQYARSRGMT--TVFNPSPVNPDFCHLWPLIDIAVV 183 (299)
T ss_dssp CTTCEEEECSCS-CHHHHHHHHHHHHHTTCE--EEECCCSCCGGGGGCGGGCSEEEE
T ss_pred ccCCEEEECCCC-CHHHHHHHHHHHHHcCCE--EEEccccchhhHHHHHhhCCEEEe
Confidence 367888776553 123456788888888866 678888777778888999998753
No 500
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=42.43 E-value=1.4e+02 Score=26.79 Aligned_cols=128 Identities=16% Similarity=0.171 Sum_probs=0.0
Q ss_pred CCCcEEeeeec-ccChhhHHHHHHHHHHcCCCEEEee---eccCcccCCC-CCCHHHHhhcccCCCCCeeEEEecc----
Q 025927 55 KSDIIVSPSIL-SANFAKLGEQVKAVELAGCDWIHVD---VMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIV---- 125 (246)
Q Consensus 55 ~~~~~IsPSIl-~aD~~~l~~~i~~l~~~g~d~lHiD---IMDG~FVpN~-tfgp~~I~~ir~~t~~plDvHLMV~---- 125 (246)
+..+.+..++. ..+...+.++++++.+.|.+.+=+. + |. ++ .+..+.++++|+..+- |+.||++
T Consensus 131 ~~~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~spv--G~---~~~~~~~e~v~avr~a~G~--d~~l~vDan~~ 203 (401)
T 2hzg_A 131 SHGKRPYASLLFGDTPQETLERARAARRDGFAAVKFGWGPI--GR---GTVAADADQIMAAREGLGP--DGDLMVDVGQI 203 (401)
T ss_dssp CCCBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEESTTT--TS---SCHHHHHHHHHHHHHHHCS--SSEEEEECTTT
T ss_pred CCceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcCCCC--CC---CHHHHHHHHHHHHHHHhCC--CCeEEEECCCC
Q ss_pred ---Cccc---chHHHHhcCCCEEEEccCCcccccHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHhh--hhcceEEE
Q 025927 126 ---EPEQ---RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVL--DVVDLVLI 193 (246)
Q Consensus 126 ---~P~~---~i~~~~~agad~It~H~E~~~~~~~~~~i~~Ik~~G~k~GlAlnP~-Tpve~l~~~l--~~vD~VLv 193 (246)
+++. +.+.+.+.|.++|--.+. .+-...++.+++...++=|+.+-. +..+.++.++ ..+|.|.+
T Consensus 204 ~~~~~~~a~~~~~~l~~~~i~~iEqP~~----~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 276 (401)
T 2hzg_A 204 FGEDVEAAAARLPTLDAAGVLWLEEPFD----AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQI 276 (401)
T ss_dssp TTTCHHHHHTTHHHHHHTTCSEEECCSC----TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCC----ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEe
Done!