Your job contains 1 sequence.
>025931
MKSDNEWTQIAYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDYQLPPAASALHETKNK
TPNGAESALRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFDKKIGF
SEKISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYVFTGASWVA
GAFNKVAQAAGEVGQKAKEKAGMAEEEQKRKMVDDFAQVHLAESPKTSSPSGHQPSKTEP
AQGLVL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025931
(246 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129401 - symbol:AT4G17720 species:3702 "Arabi... 767 1.7e-78 2
TAIR|locus:2172947 - symbol:AT5G46870 species:3702 "Arabi... 692 3.5e-68 1
TAIR|locus:2148970 - symbol:BPA1 "binding partner of acd1... 620 1.5e-60 1
TAIR|locus:2200211 - symbol:AT1G67950 species:3702 "Arabi... 496 2.0e-47 1
TAIR|locus:2145806 - symbol:AT5G32450 species:3702 "Arabi... 435 5.9e-41 1
TAIR|locus:2012567 - symbol:AT1G14340 species:3702 "Arabi... 303 5.7e-27 1
TAIR|locus:2102067 - symbol:AT3G01210 species:3702 "Arabi... 250 2.4e-21 1
ASPGD|ASPL0000008076 - symbol:AN6004 species:162425 "Emer... 137 2.5e-07 1
DICTYBASE|DDB_G0291155 - symbol:DDB_G0291155 "RNA-binding... 127 6.1e-06 1
>TAIR|locus:2129401 [details] [associations]
symbol:AT4G17720 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009627 "systemic acquired
resistance" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOGENOM:HOG000240366 ProtClustDB:PLN03120
EMBL:AY087960 EMBL:BT004039 EMBL:BT005158 IPI:IPI00541468
RefSeq:NP_567536.1 UniGene:At.32973 ProteinModelPortal:Q8LA96
SMR:Q8LA96 IntAct:Q8LA96 STRING:Q8LA96 PRIDE:Q8LA96
EnsemblPlants:AT4G17720.1 GeneID:827493 KEGG:ath:AT4G17720
TAIR:At4g17720 InParanoid:Q8LA96 OMA:IEHVEMQ PhylomeDB:Q8LA96
Genevestigator:Q8LA96 Uniprot:Q8LA96
Length = 313
Score = 767 (275.1 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 159/230 (69%), Positives = 184/230 (80%)
Query: 2 KSDNEWTQIAYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDYQLPPAASALHETK--N 59
+S+ E T++AYVTFKD+QGAETAVLLSGATIVD SV +S+APDYQL P A A E K N
Sbjct: 36 QSETERTKLAYVTFKDLQGAETAVLLSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSN 95
Query: 60 KTPNGAESALRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFDKKIG 119
K+P +S LRKAEDVVSSMLAKGFILGKDA+ KAK+ DEKHQ TSTASAKVASFDKKIG
Sbjct: 96 KSPKAGDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIG 155
Query: 120 FSEKISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYVFTGASWV 179
F++KI+ GT VV ++VREVDQK+QVSEKTKSA AAEQ VS+ GSAIMKNRYV TGA+WV
Sbjct: 156 FTDKINTGTVVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWV 215
Query: 180 AGAFNKVAQAAGEVXXXXXXXXXXXXXXXXRKMVDDFAQVHLAESPKTSS 229
GAFNKVA+AA EV RK+VD+FA+VHL+ESPK +S
Sbjct: 216 TGAFNKVAKAAEEVGQKAKEKVGMAEEEDKRKVVDEFARVHLSESPKAAS 265
Score = 41 (19.5 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 221 LAESPKTSSPSGHQPSKTEPAQ 242
L+ESP+ S H +++P Q
Sbjct: 276 LSESPEAKKDSEHLEPQSKPLQ 297
>TAIR|locus:2172947 [details] [associations]
symbol:AT5G46870 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG67475
HOGENOM:HOG000240366 ProtClustDB:PLN03120 EMBL:BT010766
EMBL:BT011793 IPI:IPI00527393 RefSeq:NP_199498.2 UniGene:At.29926
ProteinModelPortal:Q6NM69 SMR:Q6NM69 PaxDb:Q6NM69 PRIDE:Q6NM69
EnsemblPlants:AT5G46870.1 GeneID:834731 KEGG:ath:AT5G46870
TAIR:At5g46870 InParanoid:Q6NM69 OMA:AQANISE PhylomeDB:Q6NM69
Genevestigator:Q6NM69 Uniprot:Q6NM69
Length = 295
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 146/244 (59%), Positives = 186/244 (76%)
Query: 2 KSDNEWTQIAYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDYQLPPAASA----LHET 57
+S+N+ +++AYVTFKD+QGAETAVLL+G+TIVD SV+++++PDYQLPP A A L E+
Sbjct: 36 QSENDGSKLAYVTFKDLQGAETAVLLTGSTIVDSSVTVTMSPDYQLPPDALASIESLKES 95
Query: 58 -KNKTPNGAE-SALRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFD 115
K+ +P + S RKAEDVVS M++KGF+LGKDA+ KAK+ DEKHQ TSTASA+V SFD
Sbjct: 96 NKSSSPTREDVSVFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFD 155
Query: 116 KKIGFSEKISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYVFTG 175
K+IGF+EKI+ GT+VVS++V+EVDQKFQV+EKTKSA AAEQ VS+ GSAIMKNRYV TG
Sbjct: 156 KRIGFTEKINTGTTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTG 215
Query: 176 ASWVAGAFNKVAQAAGEVXXXXXXXXXXXXXXXX--RKMVDDFAQVHLAESPKTSSPSGH 233
A+WV GAFN+V++AA EV +K+VD+ A VHL ESPK S
Sbjct: 216 ATWVTGAFNRVSKAAEEVGQKAKEKVGLAEEEEEEKKKVVDEVAIVHLTESPKALDQS-E 274
Query: 234 QPSK 237
Q SK
Sbjct: 275 QDSK 278
>TAIR|locus:2148970 [details] [associations]
symbol:BPA1 "binding partner of acd11 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002688 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL391147 UniGene:At.49030
IPI:IPI00846971 RefSeq:NP_001078595.1 SMR:A8MSB5 IntAct:A8MSB5
STRING:A8MSB5 EnsemblPlants:AT5G16840.2 GeneID:831547
KEGG:ath:AT5G16840 TAIR:At5g16840 HOGENOM:HOG000240366 OMA:DERNQIT
ProtClustDB:PLN03120 Genevestigator:A8MSB5 Uniprot:A8MSB5
Length = 260
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 131/193 (67%), Positives = 158/193 (81%)
Query: 1 MKSDNEWTQIAYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDYQLPPAASALHETKNK 60
++S NE + AYVTFK+ QGAETAVLLSGA+I D SV I LAP+Y PPAA ET++
Sbjct: 37 IQSSNEHS--AYVTFKETQGAETAVLLSGASIADQSVIIELAPNYS-PPAAPHA-ETQS- 91
Query: 61 TPNGAESALRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFDKKIGF 120
+GAES ++KAEDVVSSMLAKGFILGKDAV KAK FDEKH FTSTA+A VAS D+KIG
Sbjct: 92 --SGAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGL 149
Query: 121 SEKISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYVFTGASWVA 180
S+K++ GTS+V+++++ VDQ FQV+E+TKS + AAEQ VSS GSA+MKNRYV TG SW A
Sbjct: 150 SQKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAA 209
Query: 181 GAFNKVAQAAGEV 193
GAFN+VAQAAGEV
Sbjct: 210 GAFNRVAQAAGEV 222
>TAIR|locus:2200211 [details] [associations]
symbol:AT1G67950 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002684 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 UniGene:At.27658 UniGene:At.48348
IPI:IPI00517486 RefSeq:NP_849859.1 UniGene:At.66987
ProteinModelPortal:F4HVJ0 SMR:F4HVJ0 PRIDE:F4HVJ0
EnsemblPlants:AT1G67950.3 GeneID:843123 KEGG:ath:AT1G67950
PhylomeDB:F4HVJ0 Uniprot:F4HVJ0
Length = 279
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 100/192 (52%), Positives = 143/192 (74%)
Query: 1 MKSDNEWTQIAYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDYQLPPAASALHETKNK 60
M+S+ + +Q+AYVTFKD QGAETA+LL+GA I DL VSI+ A +YQLPP A AL +++
Sbjct: 60 MRSETQESQVAYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALAL-DSQEH 118
Query: 61 TPNGAESALRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFDKKIGF 120
+ NG +++KAEDVV+ M+ +G+ LGKDA+ KAK FD++H S ASA +AS D K+G
Sbjct: 119 SFNGF--SVKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGL 176
Query: 121 SEKISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYVFTGASWVA 180
SEK+S+GT+VV++++R++D+++QV E TKSA AAE+ S +A+M N YV +GASW +
Sbjct: 177 SEKLSIGTTVVNEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFS 236
Query: 181 GAFNKVAQAAGE 192
AF V +A E
Sbjct: 237 NAFGAVTKAVKE 248
>TAIR|locus:2145806 [details] [associations]
symbol:AT5G32450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 OMA:HQLRANA HOGENOM:HOG000240366
ProtClustDB:PLN03120 EMBL:AY088345 EMBL:BT005606 EMBL:AK117709
IPI:IPI00531330 RefSeq:NP_568522.1 UniGene:At.30677
ProteinModelPortal:Q8L9M9 SMR:Q8L9M9 PaxDb:Q8L9M9 PRIDE:Q8L9M9
EnsemblPlants:AT5G32450.1 GeneID:833204 KEGG:ath:AT5G32450
TAIR:At5g32450 eggNOG:NOG266850 InParanoid:Q8L9M9 PhylomeDB:Q8L9M9
ArrayExpress:Q8L9M9 Genevestigator:Q8L9M9 Uniprot:Q8L9M9
Length = 267
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 102/201 (50%), Positives = 140/201 (69%)
Query: 8 TQIAYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDY----------QLPPAAS-ALHE 56
++IA+VTF D + E A+LLSGATIVD V+I+ A +Y L A L E
Sbjct: 43 SRIAFVTFTDPKALEIALLLSGATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQE 102
Query: 57 --TKNKTP-NGAESA-LRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVA 112
T+ KT +G A + KA+DVV+++LAKG LG+DAV KAK FDEKHQ + ASAKV+
Sbjct: 103 STTQTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVS 162
Query: 113 SFDKKIGFSEKISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYV 172
SFDK++G +EK+SVG S V+++V+ VDQK QVS+KT +A AAE+K++ GSA+ +RYV
Sbjct: 163 SFDKRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYV 222
Query: 173 FTGASWVAGAFNKVAQAAGEV 193
GA+W +GAF+KVA+ G+V
Sbjct: 223 TAGAAWFSGAFSKVARV-GQV 242
>TAIR|locus:2012567 [details] [associations]
symbol:AT1G14340 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0006301 "postreplication
repair" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 InterPro:IPR001395 EMBL:CP002684
GO:GO:0000166 PANTHER:PTHR11732 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AY050919 EMBL:AY091417 IPI:IPI00519707 RefSeq:NP_563946.1
UniGene:At.26546 ProteinModelPortal:Q949S4 SMR:Q949S4 IntAct:Q949S4
PRIDE:Q949S4 DNASU:837995 EnsemblPlants:AT1G14340.1 GeneID:837995
KEGG:ath:AT1G14340 TAIR:At1g14340 InParanoid:Q949S4 OMA:SADECAC
PhylomeDB:Q949S4 ProtClustDB:PLN03121 ArrayExpress:Q949S4
Genevestigator:Q949S4 Uniprot:Q949S4
Length = 244
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 72/194 (37%), Positives = 115/194 (59%)
Query: 11 AYVTFKDMQGAETAVLLSGATIVDLSVSISL----APDYQLPPAASALHETKNKTPNGAE 66
AYV FKD ETAVLL+GATI+D V I+ ++ A S E ++ + + A+
Sbjct: 48 AYVMFKDSYSQETAVLLTGATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQ 107
Query: 67 -------SALRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFDKKIG 119
A+ KA++VV MLA GF+LGKDA+ KAK FDE H ++ A A+V+ +++IG
Sbjct: 108 RSEFNAGEAVTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIG 167
Query: 120 FSEKISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYVFTGASWV 179
++KI G + VR DQ++ VS+ KSA A + ++ ++++ + Y +GA W+
Sbjct: 168 LTDKIFTGL----EAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWL 223
Query: 180 AGAFNKVAQAAGEV 193
+GA + A+AA ++
Sbjct: 224 SGALERAAKAASDL 237
>TAIR|locus:2102067 [details] [associations]
symbol:AT3G01210 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] InterPro:IPR000504 InterPro:IPR012677
SMART:SM00360 EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC008261 HOGENOM:HOG000240366
ProtClustDB:PLN03121 IPI:IPI00544146 RefSeq:NP_186770.3
UniGene:At.41315 ProteinModelPortal:Q9MAD0 SMR:Q9MAD0
EnsemblPlants:AT3G01210.1 GeneID:821275 KEGG:ath:AT3G01210
TAIR:At3g01210 InParanoid:Q9MAD0 OMA:LAEISHY PhylomeDB:Q9MAD0
Genevestigator:Q9MAD0 Uniprot:Q9MAD0
Length = 249
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 74/202 (36%), Positives = 109/202 (53%)
Query: 11 AYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDYQLPPAASALHE-----TKNKTPNGA 65
AYVTF+D + AVLLSGATIVD +V IS+ Y L + + E T ++ A
Sbjct: 47 AYVTFRDAYALDMAVLLSGATIVDQTVWISVYGVY-LHESNNLRQEEDYSVTVTRSDAFA 105
Query: 66 ES---ALRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFDKKIGFSE 122
S A+ A+ VV +MLAKG++L KDA+ KAK DE +F+S + K+A +G ++
Sbjct: 106 SSPGEAITVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQ 165
Query: 123 KISVGTSVVSDRVREVDQKFQVSEKTKSAF-------VAAEQKVSSVGSA----IMKNRY 171
I +S+ + VR D+K+ S+ TKSA VAA V +A ++ +RY
Sbjct: 166 NIQ--SSM--ELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRY 221
Query: 172 VFTGASWVAGAFNKVAQAAGEV 193
GA W + A + A+AA +
Sbjct: 222 FANGALWFSDALGRAAKAAAHI 243
>ASPGD|ASPL0000008076 [details] [associations]
symbol:AN6004 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:BN001301 EMBL:AACD01000102 eggNOG:NOG67475
HOGENOM:HOG000163072 OrthoDB:EOG4C5GTR RefSeq:XP_663608.1
ProteinModelPortal:Q5B0C6 EnsemblFungi:CADANIAT00007014
GeneID:2871044 KEGG:ani:AN6004.2 OMA:HQLRANA Uniprot:Q5B0C6
Length = 270
Score = 137 (53.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/144 (27%), Positives = 73/144 (50%)
Query: 11 AYVTFKDMQGAETAVLLSGATIVDLSVSISLAPDY-QLPPAASALH-ETKNKTPNGAESA 68
A VTF+ A+TA+LL + V++ A ++ SA E K++ N E
Sbjct: 49 ATVTFEKDAAAKTALLLDQTQLGPSVVTVKAAQTLDEIAGEHSATAAEAKDENQNDLEQE 108
Query: 69 LRKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFTSTASAKVASFDKKIGFSEKISVGT 128
+ +++ LA G+ + A+ KA D+KH FTS ++ +++FDKK G SE
Sbjct: 109 DKPRSRIIAEYLAHGYTISDQAIQKAIAIDKKHGFTSRFTSVLSNFDKKTGASE------ 162
Query: 129 SVVSDRVREVDQKFQVSEKTKSAF 152
R + +D+ +++S+K +++
Sbjct: 163 -----RAKGLDESYKISDKAANSW 181
>DICTYBASE|DDB_G0291155 [details] [associations]
symbol:DDB_G0291155 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0291155 GO:GO:0045335 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000175 eggNOG:NOG67475
OMA:GETKSAT RefSeq:XP_635364.1 ProteinModelPortal:Q54F26
PRIDE:Q54F26 EnsemblProtists:DDB0233343 GeneID:8628012
KEGG:ddi:DDB_G0291155 InParanoid:Q54F26 ProtClustDB:CLSZ2728766
Uniprot:Q54F26
Length = 311
Score = 127 (49.8 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 33/110 (30%), Positives = 53/110 (48%)
Query: 70 RKAEDVVSSMLAKGFILGKDAVFKAKTFDEKHQFT-------STASAKVASFDKKIGFSE 122
R VV+S++A G+ +G+DA KA+ DE+H + AK D + SE
Sbjct: 130 RSKTSVVASIIAAGYSVGQDAAIKARQVDEEHMISLKLKVGAEAVKAKANEIDNNLHISE 189
Query: 123 KISVGTSVVSDRVREVDQKFQVSEKTKSAFVAAEQKVSSVGSAIMKNRYV 172
+ V +R +D++FQ+S KSA Q+ S++ A +N V
Sbjct: 190 SAAAIKGAVVERANALDERFQISGFFKSASDMISQQASNLMKAAEENSTV 239
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.123 0.332 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 246 230 0.00083 113 3 10 23 0.46 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 613 (65 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.67u 0.13s 28.80t Elapsed: 00:00:02
Total cpu time: 28.67u 0.13s 28.80t Elapsed: 00:00:02
Start: Sat May 11 09:00:57 2013 End: Sat May 11 09:00:59 2013