Query 025932
Match_columns 246
No_of_seqs 113 out of 1108
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 20:56:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025932hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 2E-52 6.9E-57 358.7 22.3 220 13-246 3-225 (312)
2 1odm_A Isopenicillin N synthas 100.0 4.2E-49 1.4E-53 340.5 20.8 223 9-246 1-247 (331)
3 1gp6_A Leucoanthocyanidin diox 100.0 2.8E-48 9.7E-53 338.1 20.8 209 15-246 45-265 (356)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 1.8E-48 6E-53 334.6 14.2 203 15-246 2-211 (319)
5 3on7_A Oxidoreductase, iron/as 100.0 7.4E-47 2.5E-51 319.1 20.5 201 15-246 2-208 (280)
6 1dcs_A Deacetoxycephalosporin 100.0 1.1E-47 3.7E-52 328.9 14.2 203 15-246 3-220 (311)
7 2opi_A L-fuculose-1-phosphate 74.1 1.7 5.8E-05 34.1 2.4 36 16-51 125-160 (212)
8 2fk5_A Fuculose-1-phosphate al 69.9 2.9 0.0001 32.4 2.9 37 15-51 116-153 (200)
9 1otj_A Alpha-ketoglutarate-dep 69.8 4.5 0.00015 32.9 4.2 51 14-67 15-65 (283)
10 1e4c_P L-fuculose 1-phosphate 69.0 2.6 8.8E-05 33.1 2.4 36 16-51 122-157 (215)
11 1pvt_A Sugar-phosphate aldolas 67.5 3.3 0.00011 33.0 2.8 37 15-51 160-196 (238)
12 2dbn_A Hypothetical protein YB 65.1 2.6 8.9E-05 37.0 1.8 55 14-69 98-152 (461)
13 1oih_A Putative alkylsulfatase 64.7 6.8 0.00023 32.2 4.3 52 15-69 26-78 (301)
14 2v9l_A Rhamnulose-1-phosphate 63.0 3.8 0.00013 33.4 2.4 36 16-51 179-214 (274)
15 2irp_A Putative aldolase class 62.0 5.2 0.00018 31.1 3.0 36 15-51 138-176 (208)
16 3itq_A Prolyl 4-hydroxylase, a 61.6 19 0.00063 28.2 6.1 20 46-65 43-62 (216)
17 3o2g_A Gamma-butyrobetaine dio 60.4 6.4 0.00022 33.8 3.5 51 16-69 122-173 (388)
18 1m5a_B Insulin B chain; alpha 58.5 12 0.00041 19.5 2.9 19 28-46 9-27 (30)
19 3pvj_A Alpha-ketoglutarate-dep 56.8 9.4 0.00032 31.1 3.8 51 15-68 14-64 (277)
20 3r1j_A Alpha-ketoglutarate-dep 55.3 13 0.00045 30.7 4.4 52 15-69 20-72 (301)
21 3ocr_A Class II aldolase/adduc 52.3 8.2 0.00028 31.5 2.7 37 15-51 155-192 (273)
22 1v7z_A Creatininase, creatinin 51.1 10 0.00036 30.6 3.1 48 14-61 81-132 (260)
23 2jig_A Prolyl-4 hydroxylase; h 45.1 45 0.0015 25.8 5.9 22 44-65 22-43 (224)
24 3m4r_A Uncharacterized protein 42.1 12 0.0004 29.5 2.0 34 17-51 156-190 (222)
25 1vm6_A DHPR, dihydrodipicolina 39.2 59 0.002 25.7 5.6 42 18-62 56-98 (228)
26 1nx8_A CARC, carbapenem syntha 38.0 9.4 0.00032 30.7 0.9 46 15-67 17-62 (273)
27 3dkq_A PKHD-type hydroxylase S 37.7 32 0.0011 27.5 3.9 49 185-246 100-165 (243)
28 3qy9_A DHPR, dihydrodipicolina 35.2 53 0.0018 26.1 4.9 37 31-67 91-127 (243)
29 3eat_X Pyoverdine biosynthesis 35.1 23 0.0008 28.9 2.9 51 15-68 29-81 (293)
30 2da7_A Zinc finger homeobox pr 33.7 20 0.0007 22.8 1.7 39 136-174 12-50 (71)
31 3ijp_A DHPR, dihydrodipicolina 33.4 47 0.0016 27.2 4.4 43 19-64 92-135 (288)
32 3exc_X Uncharacterized protein 33.2 79 0.0027 20.9 4.8 48 17-67 7-58 (91)
33 4f3y_A DHPR, dihydrodipicolina 32.5 46 0.0016 26.9 4.2 43 19-64 77-120 (272)
34 3no4_A Creatininase, creatinin 31.2 60 0.0021 26.2 4.6 49 15-63 91-143 (267)
35 4ay7_A Methylcobalamin\: coenz 30.5 1.2E+02 0.0039 25.2 6.5 41 28-68 304-348 (348)
36 2z7b_A MLR6791 protein; class 30.5 25 0.00087 28.4 2.3 36 16-51 157-201 (270)
37 2x4k_A 4-oxalocrotonate tautom 30.3 50 0.0017 19.2 3.2 25 150-174 18-42 (63)
38 3ghf_A Septum site-determining 27.8 28 0.00095 24.5 1.8 43 19-61 51-94 (120)
39 3abf_A 4-oxalocrotonate tautom 26.8 71 0.0024 18.8 3.5 24 151-174 17-40 (64)
40 2rdq_A 1-deoxypentalenic acid 23.8 86 0.003 24.9 4.4 36 32-68 22-57 (288)
41 2ivy_A Hypothetical protein SS 23.7 1.4E+02 0.0049 20.0 4.8 46 19-67 8-57 (101)
42 2opa_A Probable tautomerase YW 23.0 83 0.0028 18.2 3.2 24 150-173 15-38 (61)
43 1otf_A 4-oxalocrotonate tautom 22.5 85 0.0029 18.2 3.2 24 150-173 15-38 (62)
44 2k9l_A RNA polymerase sigma fa 21.2 44 0.0015 21.2 1.7 38 28-65 31-74 (76)
45 1p9l_A Dihydrodipicolinate red 20.0 2.5E+02 0.0084 22.1 6.3 43 19-64 49-92 (245)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2e-52 Score=358.66 Aligned_cols=220 Identities=27% Similarity=0.419 Sum_probs=186.7
Q ss_pred CCCccceeeCCCc--chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC-CCCcccccC
Q 025932 13 AQTVLNCIDLSSP--DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGYTPV 89 (246)
Q Consensus 13 ~~~~iPvIDls~~--~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~~ 89 (246)
++.+||||||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+||++.
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 3 STSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp -CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 4678999999853 4567899999999999999999999999999999999999999999999998774 458999998
Q ss_pred cccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 025932 90 LDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLD 169 (246)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 169 (246)
+.+.... ....|++|.|.++.+.+.+.+.. ....+|.||. .+++|++++++|+++|.+++.+||++|+++||++
T Consensus 83 g~e~~~~--~~~~D~kE~~~~~~~~~~~~~~~--~~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 156 (312)
T 3oox_A 83 GVETAKG--ADHYDLKEFWHMGRDLPPGHRFR--AHMADNVWPA--EIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE 156 (312)
T ss_dssp CCCCSTT--SCSCCCCEEEEECCCCCTTCGGG--GTSCCCCCCT--TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cceecCC--CCCCCceeeeEeecCCCcCCcch--hccCCCCCCC--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 8776432 23579999999986543332211 1345799997 4899999999999999999999999999999999
Q ss_pred cccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025932 170 ADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 170 ~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+++|. ..+..+.+.||++||||++.+. .. +|+++|||+|+||||+||+++||||++++| +|++|+|+||
T Consensus 157 ~~~f~--~~~~~~~~~lr~~~Ypp~~~~~-~~-~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g----~W~~V~p~pg 225 (312)
T 3oox_A 157 RDFFK--PTVQDGNSVLRLLHYPPIPKDA-TG-VRAGAHGDINTITLLLGAEEGGLEVLDRDG----QWLPINPPPG 225 (312)
T ss_dssp TTTTH--HHHTTCCCEEEEEEECCCSSCC-C---CEEEECCCSSEEEEECCTTSCEEEECTTS----CEEECCCCSS
T ss_pred HHHHH--HHhcCCcceeeeEecCCCCCCc-CC-cCccceecCceEEEEeEcCcCceEEECCCC----cEEECCCCCC
Confidence 99998 5667778899999999987652 33 999999999999999999999999998876 4999999997
No 2
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.2e-49 Score=340.53 Aligned_cols=223 Identities=22% Similarity=0.370 Sum_probs=183.2
Q ss_pred CCCCCCCccceeeCCCc------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHh-hCCCHHHHhhhccCC
Q 025932 9 NGAEAQTVLNCIDLSSP------DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRF-FKMPLNEKMKVLRNE 81 (246)
Q Consensus 9 ~~~~~~~~iPvIDls~~------~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~ 81 (246)
|++++..+||||||+.. .+.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 1 m~s~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-- 75 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-- 75 (331)
T ss_dssp --CCCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC--
T ss_pred CCcccCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh--
Confidence 45667789999999842 23567999999999999999999999 999999999999 9999999999976
Q ss_pred CCcccccCcccccCCC----CCCCCCcceeeeecccCCCCCCC--CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHH
Q 025932 82 KHRGYTPVLDELLDPD----TQVRGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAPDCLPGWRETMERFQREALEVA 155 (246)
Q Consensus 82 ~~~GY~~~~~e~~~~~----~~~~~d~~E~~~~~~~~~~~~~~--~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~ 155 (246)
+||.+.+.+.+..+ ..+..|++|.|+++.+.+.+.+. ....+..+|.||..+.+++|++++++|+++|.+++
T Consensus 76 --~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~ 153 (331)
T 1odm_A 76 --RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLS 153 (331)
T ss_dssp --TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHH
T ss_pred --cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 79998877653221 01457999999998654333221 11224568999974348999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccCcccccCcccceE--ecccC------C---CCCCCCCCccccccccccCceeEEeeCCCCc
Q 025932 156 KAVARIIALALDLDADFFDKPEMLGQAIATLR--LLHYE------G---QISDPSKGMYGAGAHSDYGLITLLATDEVAG 224 (246)
Q Consensus 156 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~G 224 (246)
.+||++|+++||+++++|. ..+..+.+.|| ++||| | |+.+ +...+|+++|||+|+||||+||+++|
T Consensus 154 ~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~-~~~~~g~~~HtD~g~lTlL~qd~v~G 230 (331)
T 1odm_A 154 SALLKGYALALGKEENFFA--RHFKPDDTLASVVLIRYPYLDPYPEAAIKTAA-DGTKLSFEWHEDVSLITVLYQSNVQN 230 (331)
T ss_dssp HHHHHHHHHHTTSCTTTTG--GGCCTTTCCCEEEEEEECCCSSCCGGGCEECT-TSCEEEEEEECCSSSEEEEEECSSCC
T ss_pred HHHHHHHHHHhCCCHHHHH--HHhcCcHHHHHHHHhhCCCcccccccccCCCc-cccccccccccCCCeEEEEeeCCCCC
Confidence 9999999999999999998 66677889999 99999 6 4332 12378999999999999999999999
Q ss_pred eeEeeCCCCCCCCeEeCCCCCC
Q 025932 225 LQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 225 Lqv~~~~~~~~~~W~~V~p~~g 246 (246)
|||++++ + |++|+|+||
T Consensus 231 LQV~~~~----g-Wi~V~p~pg 247 (331)
T 1odm_A 231 LQVETAA----G-YQDIEADDT 247 (331)
T ss_dssp EEEEETT----E-EEECCCCTT
T ss_pred EEEEcCC----C-eEECCCCCC
Confidence 9999875 3 999999997
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.8e-48 Score=338.11 Aligned_cols=209 Identities=22% Similarity=0.399 Sum_probs=177.3
Q ss_pred CccceeeCCCc-----c-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC---CCcc
Q 025932 15 TVLNCIDLSSP-----D-IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE---KHRG 85 (246)
Q Consensus 15 ~~iPvIDls~~-----~-~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~G 85 (246)
.+||||||+.. . +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .++|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 36999999852 1 3457899999999999999999999999999999999999999999999987653 4889
Q ss_pred cccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025932 86 YTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALA 165 (246)
Q Consensus 86 Y~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~ 165 (246)
|...+.+. ..+..|++|.|.++.. +.. ...+|.||. .+++|++.+++|+++|.+++.+||++|+++
T Consensus 125 y~~~~~~~----~~~~~d~kE~~~~~~~-----p~~---~~~~~~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~ 190 (356)
T 1gp6_A 125 YGSKLANN----ASGQLEWEDYFFHLAY-----PEE---KRDLSIWPK--TPSDYIEATSEYAKCLRLLATKVFKALSVG 190 (356)
T ss_dssp EECCCCCS----TTCCCCSCEEEEEEEE-----SGG---GCCGGGSCC--SSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCcccC----CCCCCChhheeeeecC-----Ccc---ccccccCCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98754322 2345799999999753 110 135789997 578999999999999999999999999999
Q ss_pred CCCCcccccCccccc---CcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCC
Q 025932 166 LDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVA 242 (246)
Q Consensus 166 Lgl~~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~ 242 (246)
|||++++|. ..+. .+.+.||++|||||+.+ +..+|+++|||+|+||||+||.++||||+. +| +|++|+
T Consensus 191 Lgl~~~~f~--~~~~~~~~~~~~lrl~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~-~g----~Wi~V~ 261 (356)
T 1gp6_A 191 LGLEPDRLE--KEVGGLEELLLQMKINYYPKCPQP--ELALGVEAHTDVSALTFILHNMVPGLQLFY-EG----KWVTAK 261 (356)
T ss_dssp TTSCTTHHH--HHTTHHHHCEEEEEEEEECCCSST--TTCCSEEEECCCSSEEEEEECSCCCEEEEE-TT----EEEECC
T ss_pred cCCCHHHHH--HHhcccCCccceeeeeecCCCCCc--ccccCcCCccCCCeEEEEEEcCCCCeEEec-CC----cEEECc
Confidence 999999998 5555 46789999999998753 457899999999999999999999999996 44 599999
Q ss_pred CCCC
Q 025932 243 PMKG 246 (246)
Q Consensus 243 p~~g 246 (246)
|+||
T Consensus 262 p~pg 265 (356)
T 1gp6_A 262 CVPD 265 (356)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 9997
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.8e-48 Score=334.59 Aligned_cols=203 Identities=26% Similarity=0.423 Sum_probs=172.6
Q ss_pred CccceeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCCCcccccCcc
Q 025932 15 TVLNCIDLSSP---DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPVLD 91 (246)
Q Consensus 15 ~~iPvIDls~~---~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~ 91 (246)
.+||||||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.+.+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 46999999853 3567899999999999999999999999999999999999999999999998643 358877543
Q ss_pred cccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Q 025932 92 ELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDAD 171 (246)
Q Consensus 92 e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~ 171 (246)
+. +..|++|.|.++.. |. ..+|.||. .+++|++.+++|+++|.+++.+||++|+++||++++
T Consensus 80 e~------~~~d~ke~~~~~~~-----p~-----~~~~~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 141 (319)
T 1w9y_A 80 EV------TDMDWESTFFLKHL-----PI-----SNISEVPD--LDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKG 141 (319)
T ss_dssp CG------GGCCCCEEEEEEEE-----SC-----CGGGGCTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred cC------CCCChhhheeeecC-----Cc-----cccccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 32 45799999999743 11 13688997 578999999999999999999999999999999999
Q ss_pred cccCccccc---CcccceEecccCCCCCCCCCCccccccccccCceeEEeeC-CCCceeEeeCCCCCCCCeEeCCCCCC
Q 025932 172 FFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 172 ~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+|. ..+. .+.+.||++|||||+.+ +..+|+++|||+|+||||+|| +++||||+.+ | +|++|+|+||
T Consensus 142 ~f~--~~~~~~~~~~~~lrl~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~-g----~Wi~V~p~pg 211 (319)
T 1w9y_A 142 YLK--NAFYGSKGPNFGTKVSNYPPCPKP--DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD-G----QWIDVPPMRH 211 (319)
T ss_dssp HHH--HHHHTTTCCEEEEEEEECCCCSCG--GGGSSCCCBCCSSSEEEEEESSSCCCEEEEET-T----EEEECCCCTT
T ss_pred HHH--HHhcCcCCccceeEEEecCCCccc--ccccccccccCCCceEEEEecCCCCeeeEeeC-C----eEEEcccCCC
Confidence 988 4444 25578999999998753 457899999999999999995 7999999753 3 5999999997
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.4e-47 Score=319.12 Aligned_cols=201 Identities=28% Similarity=0.393 Sum_probs=162.1
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC-CCCcccccCc-cc
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGYTPVL-DE 92 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~~~-~e 92 (246)
++||||||+..+ .+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++... ...+||.+.+ .+
T Consensus 2 ~~IPvIDls~~~---~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e 76 (280)
T 3on7_A 2 MKLETIDYRAAD---SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISE 76 (280)
T ss_dssp --CCEEETTSTT---HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC---
T ss_pred CCCCEEECCChh---HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcccc
Confidence 479999998753 4789999999999999999999999999999999999998 789998654 4589999876 44
Q ss_pred ccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc--
Q 025932 93 LLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDA-- 170 (246)
Q Consensus 93 ~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~-- 170 (246)
.... ....|++|.|.+. .||. .+++|++++++|+++|.+++.+||++|+++||++.
T Consensus 77 ~~~~--~~~~D~kE~~~~~------------------p~~~--~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 134 (280)
T 3on7_A 77 TAKG--HTVKDIKEYYHVY------------------PWGR--IPDSLRANILAYYEKANTLASELLEWIETYSPDEIKA 134 (280)
T ss_dssp -------CCCCSCEEEEEC------------------TTSC--CCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHT
T ss_pred ccCC--CCcccHHHHHhcC------------------CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 4321 2357999999874 1453 45799999999999999999999999999999863
Q ss_pred ccccCc-ccccCc-ccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025932 171 DFFDKP-EMLGQA-IATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 171 ~~~~~~-~~~~~~-~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+++... ..+.++ .+.||++||||++.++....+|+++|||+|+||||+||+++||||++++| +|++|+|+||
T Consensus 135 ~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g----~W~~V~p~pg 208 (280)
T 3on7_A 135 KFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDG----SWLDVPSDFG 208 (280)
T ss_dssp TCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTS----CEEECCCCTT
T ss_pred hhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCC----CEEECcCCCC
Confidence 332210 233344 48899999999986544568999999999999999999999999998776 4999999997
No 6
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.1e-47 Score=328.90 Aligned_cols=203 Identities=20% Similarity=0.260 Sum_probs=158.6
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCC-HHHHhhhccC--CCCcccccCcc
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMP-LNEKMKVLRN--EKHRGYTPVLD 91 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~GY~~~~~ 91 (246)
.+||||||+.....+..++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++... ...+||.+.+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 57999999842111112389999999999999999999999999999999999999 9999999876 35899999877
Q ss_pred cccCC--CCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-
Q 025932 92 ELLDP--DTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDL- 168 (246)
Q Consensus 92 e~~~~--~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl- 168 (246)
|.+.. ...+..|++|.|+++.. +|.|| +++|++.+++|+++|.+++.+||++|+++||+
T Consensus 83 e~~~~~~~~~~~~d~~E~~~~~~~--------------~n~wP----~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 144 (311)
T 1dcs_A 83 ESTAQITNTGSYSDYSMCYSMGTA--------------DNLFP----SGDFERIWTQYFDRQYTASRAVAREVLRATGTE 144 (311)
T ss_dssp ---------------CEEEEECSS--------------SCCCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccccCCCCCCCcceeeeccCC--------------CCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 65410 11245799999999832 68899 68999999999999999999999999999999
Q ss_pred ---CcccccCcccccCcccceEecccCCCCCCCCCC--ccccccccccCceeEEeeC-CCCc---eeEeeCCCCCCCCeE
Q 025932 169 ---DADFFDKPEMLGQAIATLRLLHYEGQISDPSKG--MYGAGAHSDYGLITLLATD-EVAG---LQICKDRDAKPQLWE 239 (246)
Q Consensus 169 ---~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~--~~~~~~HtD~g~lTiL~qd-~~~G---Lqv~~~~~~~~~~W~ 239 (246)
++++|.+ . .+.||++||||++.++..+ .+|+++|||+|+||||+|| .++| |||++ +| +|+
T Consensus 145 ~~~~~~~f~~--~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g----~W~ 213 (311)
T 1dcs_A 145 PDGGVEAFLD--C----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GG----AFT 213 (311)
T ss_dssp CTTCHHHHHS--C----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TT----EEE
T ss_pred CcCcHhHHhh--c----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CC----EEE
Confidence 7778772 2 7789999999987643223 7899999999999999998 8999 99999 44 599
Q ss_pred eCCCCCC
Q 025932 240 DVAPMKG 246 (246)
Q Consensus 240 ~V~p~~g 246 (246)
+|+|+||
T Consensus 214 ~V~p~pg 220 (311)
T 1dcs_A 214 DLPYRPD 220 (311)
T ss_dssp ECCCCTT
T ss_pred eCcCCCC
Confidence 9999997
No 7
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=74.07 E-value=1.7 Score=34.08 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=31.2
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025932 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||++++..+...++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999986666678889999999888999999995
No 8
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=69.95 E-value=2.9 Score=32.43 Aligned_cols=37 Identities=8% Similarity=0.098 Sum_probs=31.3
Q ss_pred Ccccee-eCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025932 15 TVLNCI-DLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvI-Dls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..||++ ++..+...++++.+.+++.+.-.+.|.|||+
T Consensus 116 ~~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 116 KEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp SCEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CCceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 379999 8876666678889999999989999999995
No 9
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=69.83 E-value=4.5 Score=32.90 Aligned_cols=51 Identities=18% Similarity=0.234 Sum_probs=37.1
Q ss_pred CCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhh
Q 025932 14 QTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFF 67 (246)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF 67 (246)
-++|+-||++..-..+..++|.+++.++|++.+.+..++.+. ..+.++.|-
T Consensus 15 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred eEEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 356777888763334568899999999999999999987643 344555553
No 10
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=69.01 E-value=2.6 Score=33.11 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=30.9
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025932 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||++++..+...++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999976666677888999999888999999995
No 11
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=67.47 E-value=3.3 Score=32.99 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=31.5
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..||++++..+...++++++.+++++.-.+.|.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 4699999986666678888999999888999999996
No 12
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=65.12 E-value=2.6 Score=37.04 Aligned_cols=55 Identities=7% Similarity=0.032 Sum_probs=39.8
Q ss_pred CCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCC
Q 025932 14 QTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKM 69 (246)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~l 69 (246)
..-||.||+++.....+.++..+.+++.|++.|.|. ||.+......+.+.+|.+.
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 357999999754332233556688899999988875 7888877777777777643
No 13
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=64.66 E-value=6.8 Score=32.18 Aligned_cols=52 Identities=10% Similarity=0.067 Sum_probs=37.9
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCC-CCHHHHHHHHHHHhHhhCC
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHG-ISQEFMEEVFSQSKRFFKM 69 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hg-i~~~~~~~~~~~~~~fF~l 69 (246)
++|+-||++..-..+..++|.+++.++|++.+.+.. ++. +...+.++.|-.+
T Consensus 26 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 456777887533345678999999999999999998 885 4555566666443
No 14
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=63.05 E-value=3.8 Score=33.45 Aligned_cols=36 Identities=11% Similarity=0.066 Sum_probs=31.4
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025932 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||++++..+...++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999976666678889999999999999999996
No 15
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=61.97 E-value=5.2 Score=31.06 Aligned_cols=36 Identities=11% Similarity=0.114 Sum_probs=29.2
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcc---eEEEEcCCC
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCG---FFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~G---ff~l~~hgi 51 (246)
..||++++. +...++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 479999985 555677888999998875 788999995
No 16
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=61.59 E-value=19 Score=28.25 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=14.5
Q ss_pred EEcCCCCHHHHHHHHHHHhH
Q 025932 46 VVNHGISQEFMEEVFSQSKR 65 (246)
Q Consensus 46 l~~hgi~~~~~~~~~~~~~~ 65 (246)
+...=++++.++.+.+.++.
T Consensus 43 ~~~~fLs~~Ec~~Li~~a~~ 62 (216)
T 3itq_A 43 VLGNVLSDEECDELIELSKS 62 (216)
T ss_dssp EEESCSCHHHHHHHHHHHHH
T ss_pred EECCcCCHHHHHHHHHHhhc
Confidence 33334688889999988875
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=60.44 E-value=6.4 Score=33.84 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=38.6
Q ss_pred ccceeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCC
Q 025932 16 VLNCIDLSSPD-IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKM 69 (246)
Q Consensus 16 ~iPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~l 69 (246)
++|.||++..- ..+.+.++.+++.++|++.+.+.+++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 78999997432 3566889999999999999999998754 444556666544
No 18
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=58.47 E-value=12 Score=19.51 Aligned_cols=19 Identities=37% Similarity=0.669 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhcceEEE
Q 025932 28 QQSVSLLKQACLDCGFFYV 46 (246)
Q Consensus 28 ~~~~~~l~~A~~~~Gff~l 46 (246)
..+++.|.-.|.+-||||-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 5678889999999999983
No 19
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=56.82 E-value=9.4 Score=31.06 Aligned_cols=51 Identities=18% Similarity=0.238 Sum_probs=38.6
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhC
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFK 68 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 68 (246)
++|.=|||+..-..+..++|.+++.++|++.+.+..++.+ ...+.++.|=.
T Consensus 14 aei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 5677788886334456789999999999999999998764 44456666644
No 20
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=55.34 E-value=13 Score=30.68 Aligned_cols=52 Identities=8% Similarity=0.116 Sum_probs=38.3
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHHhHhhCC
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQSKRFFKM 69 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~~~fF~l 69 (246)
++|+-|||+..-..+..++|.+|+.++|++.+.+. .++.+ ...+.++.|=.+
T Consensus 20 aei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 56777888743345668899999999999999999 78764 344556666443
No 21
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=52.31 E-value=8.2 Score=31.48 Aligned_cols=37 Identities=14% Similarity=0.027 Sum_probs=30.8
Q ss_pred CccceeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCC
Q 025932 15 TVLNCIDLSSPD-IQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..||++++.... ..++.++|.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 479999997654 4567888999999999999999995
No 22
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=51.13 E-value=10 Score=30.57 Aligned_cols=48 Identities=13% Similarity=0.143 Sum_probs=34.1
Q ss_pred CCccc-eeeCCCcchHHHHHHHHHHHHhcc---eEEEEcCCCCHHHHHHHHH
Q 025932 14 QTVLN-CIDLSSPDIQQSVSLLKQACLDCG---FFYVVNHGISQEFMEEVFS 61 (246)
Q Consensus 14 ~~~iP-vIDls~~~~~~~~~~l~~A~~~~G---ff~l~~hgi~~~~~~~~~~ 61 (246)
....| +|+++...-.+.+..|.+++.++| ++.|.+||=....++.+.+
T Consensus 81 h~~fPGTisl~~~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~ 132 (260)
T 1v7z_A 81 GNHFPGTTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGID 132 (260)
T ss_dssp CTTSSSCBCBCHHHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHH
T ss_pred ccCCCceEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHH
Confidence 34455 677765555677899999999999 6778899865555555544
No 23
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=45.07 E-value=45 Score=25.85 Aligned_cols=22 Identities=9% Similarity=0.239 Sum_probs=15.0
Q ss_pred EEEEcCCCCHHHHHHHHHHHhH
Q 025932 44 FYVVNHGISQEFMEEVFSQSKR 65 (246)
Q Consensus 44 f~l~~hgi~~~~~~~~~~~~~~ 65 (246)
+++...=++++.++.+.+.++.
T Consensus 22 i~~~~~fLs~~Ec~~li~~~~~ 43 (224)
T 2jig_A 22 AFLLKNFLSDEECDYIVEKARP 43 (224)
T ss_dssp EEEETTCSCHHHHHHHHHHHGG
T ss_pred EEEEcccCCHHHHHHHHHHhhc
Confidence 4444444688888888887764
No 24
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=42.07 E-value=12 Score=29.52 Aligned_cols=34 Identities=9% Similarity=0.123 Sum_probs=27.9
Q ss_pred cceeeCCCcchHHHHHHHHHHHHhc-ceEEEEcCCC
Q 025932 17 LNCIDLSSPDIQQSVSLLKQACLDC-GFFYVVNHGI 51 (246)
Q Consensus 17 iPvIDls~~~~~~~~~~l~~A~~~~-Gff~l~~hgi 51 (246)
||++++..+.. ++.++|.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 89999876665 7888999999864 6788999995
No 25
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=39.23 E-value=59 Score=25.67 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=28.1
Q ss_pred ceeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHH
Q 025932 18 NCIDLSSPDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQ 62 (246)
Q Consensus 18 PvIDls~~~~~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~ 62 (246)
=+|||+.++. +....+.|.+.|.=.|++. |.+.+.++.+.++
T Consensus 56 VvIDFT~P~a---~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~ 98 (228)
T 1vm6_A 56 VVIDFSSPEA---LPKTVDLCKKYRAGLVLGTTALKEEHLQMLREL 98 (228)
T ss_dssp EEEECSCGGG---HHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHH
T ss_pred EEEECCCHHH---HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHH
Confidence 4899987753 4455577778888777744 7777655555443
No 26
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=37.98 E-value=9.4 Score=30.73 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=32.9
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhh
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFF 67 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF 67 (246)
++|+-||++.. . .++|.+++.++|++.+.+..++.+ ...+.++.|-
T Consensus 17 a~i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G 62 (273)
T 1nx8_A 17 AYIDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYG 62 (273)
T ss_dssp EEECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEEECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 44555666544 2 788999999999999999988754 4445555553
No 27
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=37.72 E-value=32 Score=27.47 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=27.5
Q ss_pred ceEecccCCCCCCCCCCccccccccccC-----------ceeEEee--C----CCCceeEeeCCCCCCCCeEeCCCCCC
Q 025932 185 TLRLLHYEGQISDPSKGMYGAGAHSDYG-----------LITLLAT--D----EVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 185 ~lr~~~Yp~~~~~~~~~~~~~~~HtD~g-----------~lTiL~q--d----~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
-+++++|.+.. ...+|.|.. .+|+++. + ..|.|.+.+..+ =..|+|..|
T Consensus 100 ~~~~~rY~~G~--------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-----~~~V~P~~G 165 (243)
T 3dkq_A 100 PPLFNRYQGGE--------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-----QQSIKLSAG 165 (243)
T ss_dssp EEEEEEECTTC--------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-----EEEECCCTT
T ss_pred cceEEEECCCC--------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-----cEEEecCCC
Confidence 38889998732 146777753 5677665 2 124455544322 245666654
No 28
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=35.17 E-value=53 Score=26.05 Aligned_cols=37 Identities=8% Similarity=0.242 Sum_probs=20.3
Q ss_pred HHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhh
Q 025932 31 VSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFF 67 (246)
Q Consensus 31 ~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF 67 (246)
.++|.++|++.++|+--|-++.-.++.++.+.+-.+|
T Consensus 91 ~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 91 LNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp HHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhc
Confidence 4556666666666555565555555555554444443
No 29
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=35.14 E-value=23 Score=28.89 Aligned_cols=51 Identities=10% Similarity=-0.013 Sum_probs=34.9
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCC-C-CHHHHHHHHHHHhHhhC
Q 025932 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHG-I-SQEFMEEVFSQSKRFFK 68 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hg-i-~~~~~~~~~~~~~~fF~ 68 (246)
++|.=||++.+-..+..++|.+++.++|++.+.+.. + +.+ ...+.++.|=.
T Consensus 29 aeI~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~---~~~~~a~~fG~ 81 (293)
T 3eat_X 29 LLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAE---SLTRYCHDFGE 81 (293)
T ss_dssp EEEEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSHH---HHHHHHHHHSC
T ss_pred eEEECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCHH---HHHHHHHHhCC
Confidence 455567877432334578899999999999999987 5 443 45555666644
No 30
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.72 E-value=20 Score=22.76 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=33.8
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccc
Q 025932 136 CLPGWRETMERFQREALEVAKAVARIIALALDLDADFFD 174 (246)
Q Consensus 136 ~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (246)
.+.+.+..++.|+..-.+-...-+..||..+||+.+...
T Consensus 12 ~~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVr 50 (71)
T 2da7_A 12 PYKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 50 (71)
T ss_dssp SSTHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 356789999999999988888889999999999987555
No 31
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=33.45 E-value=47 Score=27.20 Aligned_cols=43 Identities=16% Similarity=0.277 Sum_probs=25.8
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEE-cCCCCHHHHHHHHHHHh
Q 025932 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVV-NHGISQEFMEEVFSQSK 64 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~-~hgi~~~~~~~~~~~~~ 64 (246)
+||++.++ ........|.+.|.=.|+ ..|.+.+..+.+.++++
T Consensus 92 vIDFT~p~---a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~ 135 (288)
T 3ijp_A 92 ILDFSQPQ---ASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAK 135 (288)
T ss_dssp EEECSCHH---HHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHT
T ss_pred EEEcCCHH---HHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhC
Confidence 67887543 234445666677776666 34676666666666554
No 32
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=33.24 E-value=79 Score=20.90 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=29.7
Q ss_pred cceeeCCCcchHHHHHHHHHHHHhcceEEEEcC----CCCHHHHHHHHHHHhHhh
Q 025932 17 LNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNH----GISQEFMEEVFSQSKRFF 67 (246)
Q Consensus 17 iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~h----gi~~~~~~~~~~~~~~fF 67 (246)
|=+-|+++..+ ..++.+.|+++||..|-+. -+++.....+........
T Consensus 7 lV~YDI~~~kr---r~kv~k~l~~yGl~rvQ~SVFe~~lt~~~~~~L~~~L~~~i 58 (91)
T 3exc_X 7 LVVYDVSDDSK---RNKLANNLKKLGLERIQRSAFEGDMDSQRMKDLVRVVKLIV 58 (91)
T ss_dssp EEEEECCSHHH---HHHHHHHHHHTTCEEEETTEEEEECC--CHHHHHHHHHHHS
T ss_pred EEEEeCCCchH---HHHHHHHHHHhCCccceeeEEEEECCHHHHHHHHHHHHHhc
Confidence 33556655433 4889999999999888765 255555555555444433
No 33
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=32.47 E-value=46 Score=26.93 Aligned_cols=43 Identities=19% Similarity=0.270 Sum_probs=26.4
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEE-cCCCCHHHHHHHHHHHh
Q 025932 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVV-NHGISQEFMEEVFSQSK 64 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~-~hgi~~~~~~~~~~~~~ 64 (246)
+||++.++ ...++...|.+.|.=.|+ ..|++.+.++.+.++++
T Consensus 77 VIDfT~p~---a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~ 120 (272)
T 4f3y_A 77 LIDFTLPE---GTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGE 120 (272)
T ss_dssp EEECSCHH---HHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTT
T ss_pred EEEcCCHH---HHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhc
Confidence 67776542 334455666677766666 45777666666666554
No 34
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=31.22 E-value=60 Score=26.24 Aligned_cols=49 Identities=22% Similarity=0.394 Sum_probs=33.0
Q ss_pred Cccc-eeeCCCcchHHHHHHHHHHHHhcce---EEEEcCCCCHHHHHHHHHHH
Q 025932 15 TVLN-CIDLSSPDIQQSVSLLKQACLDCGF---FYVVNHGISQEFMEEVFSQS 63 (246)
Q Consensus 15 ~~iP-vIDls~~~~~~~~~~l~~A~~~~Gf---f~l~~hgi~~~~~~~~~~~~ 63 (246)
...| +|.++...-...+..|.+++.+.|| +.|.+||=....++.+.+..
T Consensus 91 ~~fpGTisl~~~t~~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~~a~~el 143 (267)
T 3no4_A 91 TAFPGTISLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAAFSET 143 (267)
T ss_dssp TTSTTCBCCCHHHHHHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHHHHHHHH
T ss_pred cCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHHHHHHHH
Confidence 3444 5666544446678899999999997 66778986555555555433
No 35
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=30.55 E-value=1.2e+02 Score=25.22 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC----HHHHHHHHHHHhHhhC
Q 025932 28 QQSVSLLKQACLDCGFFYVVNHGIS----QEFMEEVFSQSKRFFK 68 (246)
Q Consensus 28 ~~~~~~l~~A~~~~Gff~l~~hgi~----~~~~~~~~~~~~~fF~ 68 (246)
++..+++.+.+..-||+.=.+|||+ .+-++.+++++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4455666677778888766789875 4668899999999975
No 36
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=30.53 E-value=25 Score=28.43 Aligned_cols=36 Identities=6% Similarity=0.120 Sum_probs=28.3
Q ss_pred ccceeeCCC---------cchHHHHHHHHHHHHhcceEEEEcCCC
Q 025932 16 VLNCIDLSS---------PDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~---------~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||++++.. ....++.+.|.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 699999641 113567888999999888999999995
No 37
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=30.32 E-value=50 Score=19.21 Aligned_cols=25 Identities=4% Similarity=0.069 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCccccc
Q 025932 150 EALEVAKAVARIIALALDLDADFFD 174 (246)
Q Consensus 150 ~~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (246)
.-.+++..|.+++++.||.+++...
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEE
Confidence 3467888888999999999987544
No 38
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=27.84 E-value=28 Score=24.46 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=24.6
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHH-HHHHHHH
Q 025932 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQE-FMEEVFS 61 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~-~~~~~~~ 61 (246)
|||++..........|.+.|+++|+..|--.|.+.+ ..+.+.+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~ 94 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDR 94 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHH
Confidence 456653211112567888888888888766665433 4433333
No 39
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=26.85 E-value=71 Score=18.77 Aligned_cols=24 Identities=8% Similarity=0.061 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhCCCCccccc
Q 025932 151 ALEVAKAVARIIALALDLDADFFD 174 (246)
Q Consensus 151 ~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (246)
-.++...|.+++++.||.++++..
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHhCCCcccEE
Confidence 357888889999999999987544
No 40
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=23.81 E-value=86 Score=24.93 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=28.8
Q ss_pred HHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhC
Q 025932 32 SLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFK 68 (246)
Q Consensus 32 ~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 68 (246)
+++.+.+.+.||+.|.+- ++.+.++.+.+....+++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 456789999999999874 688888888888777643
No 41
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=23.74 E-value=1.4e+02 Score=19.97 Aligned_cols=46 Identities=9% Similarity=0.014 Sum_probs=32.7
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEcC----CCCHHHHHHHHHHHhHhh
Q 025932 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNH----GISQEFMEEVFSQSKRFF 67 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~h----gi~~~~~~~~~~~~~~fF 67 (246)
+-|+++. ....++.+.|.++||..|-+. -++......+.+..+.+.
T Consensus 8 ~YDI~~~---kr~~kv~k~L~~yGl~rvQ~SVFe~~lt~~~~~~l~~~L~~~i 57 (101)
T 2ivy_A 8 FYDITDD---NLRNRVAEFLKKKGLDRIQYSVFMGDLNSSRLKDVEAGLKIIG 57 (101)
T ss_dssp EEEECCH---HHHHHHHHHHHHTTCEEEETTEEEEEECHHHHHHHHHHHHHHT
T ss_pred EEeCCCh---HHHHHHHHHHHHhCChhccccEEEEEcCHHHHHHHHHHHHHHh
Confidence 3455443 347889999999999888766 256777777777666655
No 42
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.98 E-value=83 Score=18.20 Aligned_cols=24 Identities=4% Similarity=0.076 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccc
Q 025932 150 EALEVAKAVARIIALALDLDADFF 173 (246)
Q Consensus 150 ~~~~l~~~ll~~l~~~Lgl~~~~~ 173 (246)
.-.+++..|.+++...||.+++..
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeE
Confidence 346788888899999999987643
No 43
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.51 E-value=85 Score=18.20 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccc
Q 025932 150 EALEVAKAVARIIALALDLDADFF 173 (246)
Q Consensus 150 ~~~~l~~~ll~~l~~~Lgl~~~~~ 173 (246)
.-.+++..|.+++.+.||.+++..
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 346788888899999999987543
No 44
>2k9l_A RNA polymerase sigma factor RPON; protein, transcription; NMR {Aquifex aeolicus}
Probab=21.16 E-value=44 Score=21.21 Aligned_cols=38 Identities=24% Similarity=0.107 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhcceEEEEcC------CCCHHHHHHHHHHHhH
Q 025932 28 QQSVSLLKQACLDCGFFYVVNH------GISQEFMEEVFSQSKR 65 (246)
Q Consensus 28 ~~~~~~l~~A~~~~Gff~l~~h------gi~~~~~~~~~~~~~~ 65 (246)
+..+..|..++-+.||+..... |++.+.++.+++..+.
T Consensus 31 ~~Ia~~iI~~LD~~GYL~~~l~eia~~l~~~~~eve~vL~~lQ~ 74 (76)
T 2k9l_A 31 QELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQKVLR 74 (76)
T ss_dssp HHHHHHHHHHCTTSSTTCCCHHHHHHHHTSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHcCCCHHHHHHHHHHHhc
Confidence 5678888899999999876432 5666666666665554
No 45
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=20.05 E-value=2.5e+02 Score=22.11 Aligned_cols=43 Identities=30% Similarity=0.352 Sum_probs=0.0
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHHh
Q 025932 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQSK 64 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~~ 64 (246)
+||++.++. ..++..+|.+.|.=.|+.. |.+.+..+.+.++++
T Consensus 49 vIDfT~p~a---~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~ 92 (245)
T 1p9l_A 49 VIDFTHPDV---VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLV 92 (245)
T ss_dssp EEECSCTTT---HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHH
T ss_pred EEEccChHH---HHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHH
Done!