BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025935
(246 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R116|NOTUM_MOUSE Protein notum homolog OS=Mus musculus GN=Notum PE=2 SV=2
Length = 503
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 57/264 (21%)
Query: 1 MEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPV----GTKVKCFADAGYFINA 56
+ +L+ KG+ A+ +L+G SAGG +L+ D L +V+ AD+G+F++
Sbjct: 219 VRELLGKGLSGAKVLLLAGSSAGGTGVLLNVDRVAELLEELGYPSIQVRGLADSGWFLDN 278
Query: 57 KDVSGASHIEQFY-AQVVATHGSAKH----LPASCTSRLSPGL---CFFPQYMARQITTP 108
K + I+ A A ++ +P C + G CFF + + P
Sbjct: 279 KQYRRSDCIDTINCAPTDAIRRGIRYWSGMVPERCQRQFKEGEEWNCFFGYKVYPTLRCP 338
Query: 109 LFIINAAYDSWQ--IKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALA 166
+F++ +D Q + N+ G G W L I N T++ +
Sbjct: 339 VFVVQWLFDEAQLTVDNVHLTGQPVQEGQW----LYIQNLGRELRGTLKDVQAS------ 388
Query: 167 GLGISSSRGMFIDACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRS-------- 218
F AC +H + ++ W TD V G S+ +A+ W DRS
Sbjct: 389 ----------FAPACLSH-EIIIRSYW--TDVQVKG-TSLPRALHCW--DRSFHDSHKAS 432
Query: 219 -------PFQKID-CAYP-CNPTC 233
PF +D C +P CNP+C
Sbjct: 433 KTPMKGCPFHLVDSCPWPHCNPSC 456
>sp|Q6P988|NOTUM_HUMAN Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2
Length = 496
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 57/264 (21%)
Query: 1 MEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN----FRALFPVGTKVKCFADAGYFINA 56
+ +L+ +G+ A+ +L+G SAGG +L+ D L +V+ AD+G+F++
Sbjct: 212 VRELLGRGLSGAKVLLLAGSSAGGTGVLLNVDRVAEQLEKLGYPAIQVRGLADSGWFLDN 271
Query: 57 KDVSGASHIEQFY-AQVVATHGSAKH----LPASCTSRLSPGL---CFFPQYMARQITTP 108
K ++ A A ++ +P C + G CFF + + P
Sbjct: 272 KQYRHTDCVDTITCAPTEAIRRGIRYWNGVVPERCRRQFQEGEEWNCFFGYKVYPTLRCP 331
Query: 109 LFIINAAYDSWQ--IKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALA 166
+F++ +D Q + N+ G G +L I N T++
Sbjct: 332 VFVVQWLFDEAQLTVDNVHLTGQPVQEG----LRLYIQNLGRELRHTLKDVPAS------ 381
Query: 167 GLGISSSRGMFIDACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRS-------- 218
F AC +H + ++ W TD V G S+ +A+ W DRS
Sbjct: 382 ----------FAPACLSH-EIIIRSHW--TDVQVKG-TSLPRALHCW--DRSLHDSHKAS 425
Query: 219 -------PFQKID-CAYP-CNPTC 233
P +D C +P CNP+C
Sbjct: 426 KTPLKGCPVHLVDSCPWPHCNPSC 449
>sp|C1H3X3|AMPP2_PARBA Probable Xaa-Pro aminopeptidase PAAG_05466 OS=Paracoccidioides
brasiliensis (strain ATCC MYA-826 / Pb01) GN=PAAG_05466
PE=3 SV=1
Length = 415
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 66 EQFYAQVVATHGSAKHLPASCTSRLSPGLCFFP-QYMARQITTPLFIINAAYDSWQIKNI 124
EQ YA V +++ SC R+ G+ + Y+A I F+ + + + + I
Sbjct: 222 EQIYALV-------QNMQESCILRIKEGVRYLDLHYLAHDILIHGFLAIGIFKAGRAEEI 274
Query: 125 LAPGVAD---PHGTWHSCKLDINNCSPTQLQTMQSFRT 159
G + PHG H L++++ SP L + RT
Sbjct: 275 KKSGASSLFFPHGLGHHIGLEVHDVSPDSLFAQDNDRT 312
>sp|P26492|FLAV_DESDE Flavodoxin OS=Desulfovibrio desulfuricans PE=1 SV=1
Length = 148
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 18/94 (19%)
Query: 3 DLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP-------VGTKVKCFADAGYFIN 55
D A+ + + +AVL GCSA G+ + D+F +LF G KV FA
Sbjct: 40 DASAENLADGYDAVLFGCSAWGMEDLEMQDDFLSLFEEFNRIGLAGRKVAAFA------- 92
Query: 56 AKDVSGASHIEQFYAQVVATHGSAKHLPASCTSR 89
SG E F V A AK L A+ +
Sbjct: 93 ----SGDQEYEHFCGAVPAIEERAKELGATIIAE 122
>sp|Q7Z3Z4|PIWL4_HUMAN Piwi-like protein 4 OS=Homo sapiens GN=PIWIL4 PE=2 SV=2
Length = 852
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 150 QLQTMQSFRT-QFLNALAGLGISSSRGMFIDACYAHCQ----TEMQETWLRTDSPVLGKM 204
QL+T+ + Q L+++A ++S + + C TEM T +P LG +
Sbjct: 699 QLKTLIEYEVPQLLSSVAESSSNTSSRLSVIVVRKKCMPRFFTEMNRT---VQNPPLGTV 755
Query: 205 SIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVFDSN 241
++A + +YD ++ C +PT +N ++D N
Sbjct: 756 VDSEATRNEWYDFYLISQVACRGTVSPTYYNVIYDDN 792
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,502,624
Number of Sequences: 539616
Number of extensions: 3370420
Number of successful extensions: 6389
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6387
Number of HSP's gapped (non-prelim): 5
length of query: 246
length of database: 191,569,459
effective HSP length: 114
effective length of query: 132
effective length of database: 130,053,235
effective search space: 17167027020
effective search space used: 17167027020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)