Query 025935
Match_columns 246
No_of_seqs 129 out of 253
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 11:13:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025935.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025935hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 1.3E-90 2.8E-95 630.6 11.2 239 1-239 164-402 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 5.6E-69 1.2E-73 501.3 16.0 218 1-223 144-361 (361)
3 PF00326 Peptidase_S9: Prolyl 92.5 0.073 1.6E-06 45.1 2.0 52 2-59 53-104 (213)
4 PF01764 Lipase_3: Lipase (cla 91.1 0.32 7E-06 38.2 4.1 55 13-73 64-119 (140)
5 PRK10566 esterase; Provisional 88.1 0.58 1.3E-05 40.2 3.7 45 5-53 99-143 (249)
6 PRK10115 protease 2; Provision 81.4 0.6 1.3E-05 47.7 0.8 30 2-31 513-542 (686)
7 PLN02802 triacylglycerol lipas 79.5 5.5 0.00012 39.5 6.7 52 13-70 330-381 (509)
8 PF10340 DUF2424: Protein of u 79.1 2.7 5.9E-05 40.1 4.3 25 12-36 194-218 (374)
9 PLN02408 phospholipase A1 78.7 6.4 0.00014 37.5 6.7 53 13-71 200-252 (365)
10 PLN02454 triacylglycerol lipas 75.6 8.4 0.00018 37.3 6.6 52 14-71 229-282 (414)
11 cd00519 Lipase_3 Lipase (class 74.5 5.6 0.00012 34.2 4.7 39 12-51 127-165 (229)
12 PF00135 COesterase: Carboxyle 74.4 5.8 0.00013 37.9 5.3 65 10-79 205-269 (535)
13 PF07859 Abhydrolase_3: alpha/ 74.1 4 8.7E-05 34.0 3.6 27 11-37 69-95 (211)
14 TIGR01840 esterase_phb esteras 73.7 2.5 5.3E-05 36.0 2.3 22 11-32 93-114 (212)
15 TIGR02821 fghA_ester_D S-formy 73.1 2.1 4.4E-05 38.2 1.7 25 12-36 137-161 (275)
16 KOG1515 Arylacetamide deacetyl 72.6 6 0.00013 37.2 4.7 32 4-36 158-189 (336)
17 COG1770 PtrB Protease II [Amin 72.4 2.2 4.7E-05 43.5 1.8 24 2-25 516-539 (682)
18 cd00741 Lipase Lipase. Lipase 72.4 5.8 0.00013 31.9 4.1 36 3-38 16-53 (153)
19 PLN03037 lipase class 3 family 72.1 10 0.00022 37.7 6.4 55 11-71 316-370 (525)
20 COG1506 DAP2 Dipeptidyl aminop 71.5 1 2.2E-05 45.3 -0.7 97 6-118 466-563 (620)
21 cd07198 Patatin Patatin-like p 71.5 2.9 6.4E-05 34.6 2.2 28 2-32 18-45 (172)
22 PF12695 Abhydrolase_5: Alpha/ 68.1 4.4 9.5E-05 31.2 2.4 23 10-32 58-80 (145)
23 COG0657 Aes Esterase/lipase [L 67.7 7.5 0.00016 35.0 4.2 27 11-37 150-176 (312)
24 KOG1209 1-Acyl dihydroxyaceton 67.7 15 0.00033 33.1 5.9 62 9-74 4-76 (289)
25 PRK10439 enterobactin/ferric e 67.7 3.6 7.8E-05 39.5 2.2 29 10-38 285-313 (411)
26 cd07224 Pat_like Patatin-like 65.0 4.7 0.0001 35.5 2.2 30 2-32 19-48 (233)
27 cd00312 Esterase_lipase Estera 64.6 4.7 0.0001 38.8 2.3 24 10-33 173-196 (493)
28 PF07819 PGAP1: PGAP1-like pro 64.3 3.9 8.4E-05 35.9 1.5 24 8-31 80-103 (225)
29 PF05728 UPF0227: Uncharacteri 62.9 7.2 0.00016 33.4 2.9 22 14-39 60-81 (187)
30 cd07204 Pat_PNPLA_like Patatin 61.6 5.9 0.00013 35.1 2.2 30 2-31 19-49 (243)
31 PLN02965 Probable pheophorbida 60.5 13 0.00027 32.2 4.1 34 13-50 72-105 (255)
32 PRK10162 acetyl esterase; Prov 59.9 7.2 0.00016 35.6 2.5 27 11-37 152-178 (318)
33 PLN02211 methyl indole-3-aceta 59.1 7.5 0.00016 34.6 2.5 24 11-34 85-108 (273)
34 PLN02442 S-formylglutathione h 58.7 5.1 0.00011 36.0 1.3 23 11-33 141-163 (283)
35 PF00756 Esterase: Putative es 58.6 7.7 0.00017 33.3 2.4 24 15-38 117-140 (251)
36 PF12697 Abhydrolase_6: Alpha/ 58.5 7.6 0.00017 31.1 2.2 37 13-53 66-102 (228)
37 PF01734 Patatin: Patatin-like 58.3 6.7 0.00015 31.2 1.9 18 14-31 28-45 (204)
38 PF00975 Thioesterase: Thioest 58.0 15 0.00032 30.9 4.0 36 14-50 67-102 (229)
39 PF02230 Abhydrolase_2: Phosph 57.9 8.1 0.00017 32.9 2.4 47 2-54 95-141 (216)
40 cd07218 Pat_iPLA2 Calcium-inde 56.5 8.2 0.00018 34.4 2.3 29 2-31 20-48 (245)
41 cd07222 Pat_PNPLA4 Patatin-lik 56.4 7.8 0.00017 34.4 2.1 30 2-31 19-49 (246)
42 TIGR03056 bchO_mg_che_rel puta 56.2 15 0.00034 31.2 3.9 21 13-33 95-115 (278)
43 cd00707 Pancreat_lipase_like P 55.7 15 0.00033 32.9 3.9 27 12-38 111-137 (275)
44 PF06821 Ser_hydrolase: Serine 55.7 13 0.00028 31.2 3.2 37 13-54 55-92 (171)
45 COG4947 Uncharacterized protei 55.6 4.2 9E-05 35.3 0.2 21 15-39 103-123 (227)
46 PRK05077 frsA fermentation/res 52.7 8 0.00017 37.0 1.6 20 11-30 263-282 (414)
47 PLN02310 triacylglycerol lipas 52.2 43 0.00093 32.4 6.5 53 12-71 208-260 (405)
48 PF00561 Abhydrolase_1: alpha/ 51.3 12 0.00025 30.7 2.3 31 3-36 36-67 (230)
49 cd07207 Pat_ExoU_VipD_like Exo 49.8 12 0.00026 31.1 2.2 27 2-31 19-45 (194)
50 cd07220 Pat_PNPLA2 Patatin-lik 49.0 12 0.00027 33.5 2.2 29 3-31 25-54 (249)
51 PLN02324 triacylglycerol lipas 48.9 54 0.0012 31.8 6.6 54 13-72 215-277 (415)
52 cd07228 Pat_NTE_like_bacteria 47.6 15 0.00034 30.4 2.4 26 2-30 20-45 (175)
53 cd07205 Pat_PNPLA6_PNPLA7_NTE1 46.3 16 0.00035 30.0 2.4 27 2-31 20-46 (175)
54 PF03583 LIP: Secretory lipase 46.0 26 0.00056 31.8 3.8 53 3-56 60-115 (290)
55 PRK04940 hypothetical protein; 45.8 21 0.00046 30.6 3.0 23 13-39 60-82 (180)
56 PRK13604 luxD acyl transferase 45.0 18 0.00039 33.6 2.6 34 12-53 107-141 (307)
57 COG1075 LipA Predicted acetylt 43.8 23 0.00049 33.0 3.1 27 9-39 123-149 (336)
58 PF03403 PAF-AH_p_II: Platelet 43.8 8.2 0.00018 36.7 0.2 17 12-28 227-243 (379)
59 PLN02571 triacylglycerol lipas 43.4 63 0.0014 31.4 6.1 53 14-72 227-287 (413)
60 COG4814 Uncharacterized protei 43.3 16 0.00034 33.5 1.9 37 2-40 127-165 (288)
61 COG0596 MhpC Predicted hydrola 43.2 23 0.0005 28.2 2.7 23 15-37 90-112 (282)
62 PLN02719 triacylglycerol lipas 42.9 69 0.0015 32.0 6.4 54 12-71 297-356 (518)
63 cd07209 Pat_hypo_Ecoli_Z1214_l 42.8 18 0.00039 31.2 2.2 27 2-31 18-44 (215)
64 PRK10349 carboxylesterase BioH 41.4 23 0.0005 30.3 2.6 29 3-34 67-95 (256)
65 PRK00870 haloalkane dehalogena 40.8 36 0.00079 30.1 3.9 36 13-52 115-150 (302)
66 cd07208 Pat_hypo_Ecoli_yjju_li 40.2 20 0.00044 31.7 2.2 28 2-31 18-45 (266)
67 KOG4627 Kynurenine formamidase 40.2 28 0.00062 31.2 3.0 27 9-35 132-158 (270)
68 TIGR02747 TraV type IV conjuga 39.9 7.8 0.00017 32.2 -0.5 8 16-23 14-21 (144)
69 KOG4569 Predicted lipase [Lipi 39.7 77 0.0017 29.5 6.0 56 12-73 170-226 (336)
70 TIGR03695 menH_SHCHC 2-succiny 39.1 23 0.00051 28.6 2.2 23 12-34 69-91 (251)
71 TIGR01250 pro_imino_pep_2 prol 38.7 23 0.00049 29.8 2.1 21 13-33 96-116 (288)
72 TIGR03611 RutD pyrimidine util 38.7 21 0.00046 29.5 1.9 22 12-33 79-100 (257)
73 PLN02733 phosphatidylcholine-s 38.3 26 0.00057 34.1 2.7 21 12-32 161-181 (440)
74 PLN02824 hydrolase, alpha/beta 38.3 25 0.00054 30.9 2.4 21 13-33 102-122 (294)
75 cd07210 Pat_hypo_W_succinogene 37.6 26 0.00056 30.6 2.3 27 2-31 20-46 (221)
76 PF06028 DUF915: Alpha/beta hy 37.4 25 0.00054 31.7 2.2 29 12-40 102-132 (255)
77 PLN02298 hydrolase, alpha/beta 36.9 25 0.00055 31.6 2.3 20 13-32 134-153 (330)
78 PLN00021 chlorophyllase 36.7 22 0.00047 32.8 1.8 24 12-35 125-148 (313)
79 COG2074 2-phosphoglycerate kin 36.2 53 0.0011 30.3 4.1 68 7-122 84-151 (299)
80 TIGR01392 homoserO_Ac_trn homo 36.1 39 0.00084 30.9 3.4 37 13-53 126-163 (351)
81 cd07225 Pat_PNPLA6_PNPLA7 Pata 36.0 26 0.00055 32.3 2.2 29 2-33 35-63 (306)
82 cd01819 Patatin_and_cPLA2 Pata 35.8 29 0.00062 28.4 2.3 29 2-31 18-46 (155)
83 PLN00413 triacylglycerol lipas 35.5 72 0.0016 31.6 5.2 24 13-36 284-307 (479)
84 TIGR03101 hydr2_PEP hydrolase, 34.7 47 0.001 29.9 3.6 48 12-70 98-145 (266)
85 TIGR03343 biphenyl_bphD 2-hydr 34.5 36 0.00078 29.3 2.8 27 12-38 100-126 (282)
86 PRK11460 putative hydrolase; P 34.1 32 0.00069 29.8 2.4 20 12-31 102-121 (232)
87 cd07230 Pat_TGL4-5_like Triacy 33.9 29 0.00063 33.6 2.2 29 2-33 93-121 (421)
88 TIGR03100 hydr1_PEP hydrolase, 33.9 37 0.00079 30.1 2.8 20 12-31 99-118 (274)
89 TIGR02427 protocat_pcaD 3-oxoa 33.2 32 0.00069 28.0 2.1 21 13-33 79-99 (251)
90 KOG2237 Predicted serine prote 33.0 22 0.00048 36.4 1.3 25 2-26 538-562 (712)
91 TIGR03712 acc_sec_asp2 accesso 32.8 25 0.00054 34.9 1.6 35 8-47 353-387 (511)
92 PRK10673 acyl-CoA esterase; Pr 32.7 48 0.001 27.9 3.3 21 13-33 81-101 (255)
93 PLN02932 3-ketoacyl-CoA syntha 32.0 68 0.0015 31.7 4.5 39 8-46 195-236 (478)
94 PF10503 Esterase_phd: Esteras 31.6 30 0.00066 30.4 1.8 35 2-40 86-120 (220)
95 PF05677 DUF818: Chlamydia CHL 31.0 67 0.0014 30.7 4.0 48 2-52 203-254 (365)
96 PLN02753 triacylglycerol lipas 30.9 1.3E+02 0.0027 30.3 6.1 54 12-71 311-370 (531)
97 TIGR00300 conserved hypothetic 29.5 56 0.0012 31.6 3.3 38 3-47 331-368 (407)
98 PRK10279 hypothetical protein; 29.3 39 0.00084 31.1 2.2 27 2-31 25-51 (300)
99 PLN02162 triacylglycerol lipas 29.1 55 0.0012 32.4 3.2 56 13-73 278-335 (475)
100 PLN02894 hydrolase, alpha/beta 28.6 67 0.0014 30.4 3.7 21 13-33 176-196 (402)
101 PLN02679 hydrolase, alpha/beta 28.5 44 0.00096 30.9 2.4 17 13-29 155-171 (360)
102 PLN02377 3-ketoacyl-CoA syntha 28.4 81 0.0017 31.4 4.3 38 8-45 219-259 (502)
103 PLN02854 3-ketoacyl-CoA syntha 28.1 82 0.0018 31.5 4.3 37 8-44 235-274 (521)
104 cd07206 Pat_TGL3-4-5_SDP1 Tria 28.1 42 0.0009 31.1 2.2 29 2-33 89-117 (298)
105 PRK11126 2-succinyl-6-hydroxy- 28.1 43 0.00093 28.1 2.1 22 12-33 65-86 (242)
106 cd07231 Pat_SDP1-like Sugar-De 27.9 43 0.00094 31.4 2.2 88 2-116 88-175 (323)
107 COG2021 MET2 Homoserine acetyl 27.7 48 0.001 31.7 2.5 38 9-46 143-184 (368)
108 PLN00415 3-ketoacyl-CoA syntha 27.6 97 0.0021 30.6 4.7 30 8-37 181-213 (466)
109 COG1752 RssA Predicted esteras 27.5 46 0.00099 30.3 2.3 20 13-32 39-58 (306)
110 PRK07581 hypothetical protein; 27.3 56 0.0012 29.5 2.9 26 14-39 125-150 (339)
111 PRK11071 esterase YqiA; Provis 26.6 53 0.0012 27.6 2.4 20 13-32 61-80 (190)
112 PHA02857 monoglyceride lipase; 25.6 45 0.00098 28.8 1.9 22 12-33 96-117 (276)
113 cd07221 Pat_PNPLA3 Patatin-lik 25.6 45 0.00098 29.9 1.9 17 15-31 34-50 (252)
114 cd07223 Pat_PNPLA5-mammals Pat 25.0 43 0.00093 32.4 1.7 16 16-31 44-59 (405)
115 PLN02578 hydrolase 24.8 94 0.002 28.5 3.9 26 12-37 151-176 (354)
116 TIGR03230 lipo_lipase lipoprot 24.7 92 0.002 30.5 3.9 26 8-34 115-140 (442)
117 PRK03592 haloalkane dehalogena 24.6 60 0.0013 28.5 2.5 34 13-50 93-126 (295)
118 TIGR01738 bioH putative pimelo 24.1 67 0.0014 26.0 2.5 21 13-33 65-85 (245)
119 COG2230 Cfa Cyclopropane fatty 24.0 1.1E+02 0.0025 28.1 4.2 32 2-33 62-94 (283)
120 smart00824 PKS_TE Thioesterase 23.9 1.3E+02 0.0028 24.0 4.2 38 12-50 63-100 (212)
121 PF00086 Thyroglobulin_1: Thyr 23.7 1E+02 0.0022 21.7 3.1 30 158-187 5-34 (68)
122 cd07227 Pat_Fungal_NTE1 Fungal 23.4 58 0.0013 29.5 2.2 28 2-32 30-57 (269)
123 cd07232 Pat_PLPL Patain-like p 23.3 51 0.0011 31.7 1.9 28 2-32 87-114 (407)
124 PLN02934 triacylglycerol lipas 23.3 79 0.0017 31.6 3.2 24 13-36 321-344 (515)
125 PRK03204 haloalkane dehalogena 23.1 64 0.0014 28.5 2.4 19 13-31 101-119 (286)
126 TIGR01836 PHA_synth_III_C poly 23.1 57 0.0012 29.9 2.1 22 11-32 134-155 (350)
127 PRK10749 lysophospholipase L2; 23.0 62 0.0014 29.3 2.3 21 13-33 131-151 (330)
128 PLN02761 lipase class 3 family 23.0 2.3E+02 0.0051 28.4 6.4 53 13-71 294-353 (527)
129 COG3911 Predicted ATPase [Gene 22.9 62 0.0013 27.7 2.0 23 9-31 6-28 (183)
130 PF03575 Peptidase_S51: Peptid 22.7 40 0.00087 27.4 0.9 11 15-25 70-80 (154)
131 TIGR01249 pro_imino_pep_1 prol 22.6 81 0.0017 28.1 2.9 24 13-36 95-118 (306)
132 PF08840 BAAT_C: BAAT / Acyl-C 22.5 1E+02 0.0022 26.5 3.4 49 3-55 12-60 (213)
133 PRK05855 short chain dehydroge 22.4 66 0.0014 30.9 2.5 21 13-33 94-114 (582)
134 PF07829 Toxin_14: Alpha-A con 22.3 47 0.001 19.3 0.8 10 226-236 5-14 (26)
135 PF12740 Chlorophyllase2: Chlo 22.3 85 0.0018 28.5 3.0 25 11-35 89-113 (259)
136 COG3545 Predicted esterase of 22.1 83 0.0018 27.2 2.7 30 7-36 52-82 (181)
137 PF02450 LCAT: Lecithin:choles 22.1 58 0.0012 30.9 2.0 24 12-35 118-141 (389)
138 PF10230 DUF2305: Uncharacteri 22.0 1.1E+02 0.0023 27.4 3.6 14 11-24 82-95 (266)
139 PF01339 CheB_methylest: CheB 21.7 53 0.0012 27.9 1.5 14 15-28 1-14 (182)
140 PRK08775 homoserine O-acetyltr 21.4 83 0.0018 28.6 2.8 21 14-34 139-159 (343)
141 PF04123 DUF373: Domain of unk 21.2 1.8E+02 0.0039 27.5 5.0 48 2-51 58-109 (344)
142 PF13130 DUF3952: Domain of un 21.1 34 0.00074 26.8 0.2 37 15-53 2-40 (107)
143 PRK00175 metX homoserine O-ace 21.0 77 0.0017 29.5 2.5 33 3-37 138-171 (379)
144 TIGR02240 PHA_depoly_arom poly 20.8 72 0.0016 27.7 2.2 22 13-34 91-112 (276)
145 KOG1516 Carboxylesterase and r 20.6 66 0.0014 31.3 2.1 22 10-31 192-213 (545)
146 PF12070 DUF3550: Protein of u 20.6 55 0.0012 32.7 1.5 22 92-113 365-386 (513)
147 PF06658 DUF1168: Protein of u 20.5 35 0.00076 28.3 0.1 16 16-31 25-40 (142)
148 PF08538 DUF1749: Protein of u 20.4 1.1E+02 0.0023 28.6 3.3 35 2-36 95-131 (303)
149 PF07643 DUF1598: Protein of u 20.3 34 0.00074 25.9 -0.0 40 8-49 9-52 (84)
150 cd07213 Pat17_PNPLA8_PNPLA9_li 20.2 67 0.0015 28.9 1.9 17 15-31 36-52 (288)
151 TIGR01607 PST-A Plasmodium sub 20.2 71 0.0015 29.3 2.1 22 13-34 142-163 (332)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.3e-90 Score=630.59 Aligned_cols=239 Identities=57% Similarity=1.120 Sum_probs=235.6
Q ss_pred ChhHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhccccc
Q 025935 1 MEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAK 80 (246)
Q Consensus 1 i~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv~~~~~~~ 80 (246)
|+|||+|||++|+++|||||||||||+|||||+||++||++++||||+|||||||.+|++|..+++++|.++|++||..+
T Consensus 164 ~~eLl~kGms~Ak~alLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k 243 (402)
T KOG4287|consen 164 MDELLAKGMSNAKQALLSGCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQK 243 (402)
T ss_pred HHHHHHhhhhHHHHHHhhcCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhccCcchhhhhhhhhHHHHhhhcCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 025935 81 HLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQ 160 (246)
Q Consensus 81 ~lp~~C~~~~~~~~Cffpq~~~~~i~tP~Filns~YD~wQl~nil~~~~~~~~~~W~~C~~~~~~Cs~~q~~~lq~f~~~ 160 (246)
+||+.|+++.+||+||||||+++.|+||+||+|++||+|||++.++|+++||+|.|+.|++|...|+++|++++|+||.+
T Consensus 244 ~Lp~~Ct~~~~p~~CfFpq~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ 323 (402)
T KOG4287|consen 244 NLPQSCTSHLEPSLCFFPQYVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQ 323 (402)
T ss_pred cCCHHHHhcCCchhhcchHHHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCceEEecccccccccccccccccCCccccCCccHHHHhhcccccCCCcccccCCCCCCCCCCCCCCC
Q 025935 161 FLNALAGLGISSSRGMFIDACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVFD 239 (246)
Q Consensus 161 ~~~~l~~~~~~~~~G~F~~SC~~Hc~~~~~~~W~~~~~p~v~g~ti~~Al~~W~~~r~~~~~iDc~yPcNptC~~~~~~ 239 (246)
|+.++..+.++.+.|+||+||++|||.+.++||+++++|+++++|||+|||||||+|..+|+|||||||||||+|+++.
T Consensus 324 ml~a~~~f~~~~~~g~finsc~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 324 MLDAVKIFSSSKQNGLFINSCFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred HHHHhhhheecccCCeeechHHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 9999999988899999999999999999999999999999999999999999999998899999999999999999763
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=5.6e-69 Score=501.32 Aligned_cols=218 Identities=49% Similarity=0.973 Sum_probs=210.9
Q ss_pred ChhHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhccccc
Q 025935 1 MEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAK 80 (246)
Q Consensus 1 i~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv~~~~~~~ 80 (246)
|++|+.+||.+|++|||+||||||+||++|+|+||++||+.++|++++|||||||.++++|.+.++.+|+.++.+|+.++
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSK 223 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhccCcchhhhhhhhhHHHHhhhcCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 025935 81 HLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQ 160 (246)
Q Consensus 81 ~lp~~C~~~~~~~~Cffpq~~~~~i~tP~Filns~YD~wQl~nil~~~~~~~~~~W~~C~~~~~~Cs~~q~~~lq~f~~~ 160 (246)
++|++|++.+++. ||||||++|+|+||+|||||+||+|||+|+|.|.. +.|.+|+.++..|+++||++||+||++
T Consensus 224 ~~p~~C~~~~~~~-C~f~q~~~~~I~tPlFivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~~ 298 (361)
T PF03283_consen 224 SLPESCVAQYDPE-CFFPQYLYPYIKTPLFIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRSE 298 (361)
T ss_pred cCCHhHHhccCcc-ccchHHHHhhcCcceeeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHHH
Confidence 9999999887776 99999999999999999999999999999999955 899999999999999999999999999
Q ss_pred HHHHHhhccCCCCceEEecccccccccccccccccCCccccCCccHHHHhhcccccCCCcccc
Q 025935 161 FLNALAGLGISSSRGMFIDACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKI 223 (246)
Q Consensus 161 ~~~~l~~~~~~~~~G~F~~SC~~Hc~~~~~~~W~~~~~p~v~g~ti~~Al~~W~~~r~~~~~i 223 (246)
|+++|+++.+++++|+|++||++|||++.+++|+++.+|+|+|+||++||+||||+|+.++.|
T Consensus 299 ~~~aL~~~~~~~~~G~Fi~SC~~Hcq~~~~~~W~~~~~p~v~g~tia~Av~dW~~~r~~~~~~ 361 (361)
T PF03283_consen 299 MLDALKNVSNSPNWGVFIPSCFAHCQSESSDTWNSPDSPRVNGKTIAEAVGDWYFSRSEVKKI 361 (361)
T ss_pred HHHHHHHhhcCCCCeEECccchhhcccccCCcccCCCcccCCCEEHHHHHHHHHhcccccccC
Confidence 999999999999999999999999999999899988899999999999999999999987765
No 3
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=92.54 E-value=0.073 Score=45.12 Aligned_cols=52 Identities=23% Similarity=0.252 Sum_probs=34.5
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCC
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV 59 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~ 59 (246)
+.|..++.-+.++|.+.|.|+||..|++-+-. .|...+ .+++.+|+ .|....
T Consensus 53 ~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~----~~~~f~-a~v~~~g~-~d~~~~ 104 (213)
T PF00326_consen 53 EYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ----HPDRFK-AAVAGAGV-SDLFSY 104 (213)
T ss_dssp HHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH----TCCGSS-EEEEESE--SSTTCS
T ss_pred HHHhccccccceeEEEEcccccccccchhhcc----cceeee-eeecccee-cchhcc
Confidence 56667788889999999999999988876653 333211 23455664 354444
No 4
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=91.08 E-value=0.32 Score=38.24 Aligned_cols=55 Identities=24% Similarity=0.370 Sum_probs=34.2
Q ss_pred ceeeeeccChhhH-HHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGL-TSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVV 73 (246)
Q Consensus 13 ~~viLsG~SAGGl-g~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv 73 (246)
..++++|+|-||. |+++..+...........+++++=++ +.-|+..+.+.++...
T Consensus 64 ~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~------P~~~~~~~~~~~~~~~ 119 (140)
T PF01764_consen 64 YSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGA------PRVGNSAFAKWYDSLF 119 (140)
T ss_dssp SEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-------S--BEHHHHHHHHHHT
T ss_pred ccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCC------ccccCHHHHHHHHhhC
Confidence 6899999999986 66666666555554355677766544 2235555566665443
No 5
>PRK10566 esterase; Provisional
Probab=88.06 E-value=0.58 Score=40.20 Aligned_cols=45 Identities=24% Similarity=0.364 Sum_probs=28.2
Q ss_pred HHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccc
Q 025935 5 MAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 53 (246)
Q Consensus 5 l~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfF 53 (246)
..++.-+.+++.|.|.|+||.-++.-+. .-|.-..+..+..+|+|
T Consensus 99 ~~~~~~~~~~i~v~G~S~Gg~~al~~~~----~~~~~~~~~~~~~~~~~ 143 (249)
T PRK10566 99 REEGWLLDDRLAVGGASMGGMTALGIMA----RHPWVKCVASLMGSGYF 143 (249)
T ss_pred HhcCCcCccceeEEeecccHHHHHHHHH----hCCCeeEEEEeeCcHHH
Confidence 3344446789999999999999885433 23332223344556665
No 6
>PRK10115 protease 2; Provisional
Probab=81.43 E-value=0.6 Score=47.65 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=25.8
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+.|+.+|+.+++++.+.|.||||+-+..-+
T Consensus 513 ~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~ 542 (686)
T PRK10115 513 DALLKLGYGSPSLCYGMGGSAGGMLMGVAI 542 (686)
T ss_pred HHHHHcCCCChHHeEEEEECHHHHHHHHHH
Confidence 578889999999999999999998665444
No 7
>PLN02802 triacylglycerol lipase
Probab=79.54 E-value=5.5 Score=39.48 Aligned_cols=52 Identities=19% Similarity=0.301 Sum_probs=37.8
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYA 70 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~ 70 (246)
..|+++|+|-||-=+.|.+.+++...+....|.+++-++ +--|+..+.++++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~ 381 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGG------PRVGNRAFADRLN 381 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCC------CCcccHHHHHHHH
Confidence 479999999999999999999998877544455554333 4456666666654
No 8
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=79.08 E-value=2.7 Score=40.10 Aligned_cols=25 Identities=28% Similarity=0.412 Sum_probs=22.5
Q ss_pred cceeeeeccChhhHHHHHHHHHHHh
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
.+.|+|.|.||||--++--..|++.
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhh
Confidence 5799999999999999888888886
No 9
>PLN02408 phospholipase A1
Probab=78.70 E-value=6.4 Score=37.47 Aligned_cols=53 Identities=15% Similarity=0.229 Sum_probs=37.6
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 71 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (246)
..|+++|+|-||-=|.|.+-+++..++....|.+++-++ +--|+..+.++++.
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGs------PRVGN~~Fa~~~~~ 252 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGG------PRVGNRSFRRQLEK 252 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCC------CCcccHHHHHHHHh
Confidence 369999999999999999999998876432455555333 45567666666654
No 10
>PLN02454 triacylglycerol lipase
Probab=75.61 E-value=8.4 Score=37.30 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=35.5
Q ss_pred eeeeeccChhhHHHHHHHHHHHhhCC--CCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 025935 14 NAVLSGCSAGGLTSILHCDNFRALFP--VGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 71 (246)
Q Consensus 14 ~viLsG~SAGGlg~~l~~D~~~~~Lp--~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (246)
.|+++|+|-||.=|.|.+-+++.... ....|.++.-++ +--|+..+.++++.
T Consensus 229 sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGs------PRVGN~~Fa~~~~~ 282 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGS------PQVGNKEFNDRFKE 282 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCC------CcccCHHHHHHHHh
Confidence 59999999999999999988876542 233455554333 44466666666654
No 11
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.49 E-value=5.6 Score=34.25 Aligned_cols=39 Identities=23% Similarity=0.343 Sum_probs=27.5
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccc
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 51 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSG 51 (246)
-.+++++|+|-||.=|.+.+-+++...+ ..+++++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEEeCC
Confidence 4678999999999877777777776653 23455555433
No 12
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=74.43 E-value=5.8 Score=37.89 Aligned_cols=65 Identities=20% Similarity=0.164 Sum_probs=35.9
Q ss_pred cccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhcccc
Q 025935 10 KNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSA 79 (246)
Q Consensus 10 ~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv~~~~~~ 79 (246)
++.++|.|.|.||||..|.+|.=.=. .+.--=+++.-||-.+......... +..+..+++.-|+.
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~---~~~LF~raI~~SGs~~~~~~~~~~~--~~~~~~la~~lgc~ 269 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPS---SKGLFHRAILQSGSALSPWATSENP--EQQAQKLAKALGCD 269 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGG---GTTSBSEEEEES--TTSTTSSBSHH--HHHHHHHHHHTTST
T ss_pred cCCcceeeeeecccccccceeeeccc---ccccccccccccccccccccccccc--chhhhhhhhhhccc
Confidence 46789999999999999998876511 0111124566666333222222221 34455555554554
No 13
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=74.06 E-value=4 Score=34.02 Aligned_cols=27 Identities=30% Similarity=0.297 Sum_probs=22.9
Q ss_pred ccceeeeeccChhhHHHHHHHHHHHhh
Q 025935 11 NAQNAVLSGCSAGGLTSILHCDNFRAL 37 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D~~~~~ 37 (246)
+.++|+|+|.||||.=++.-+-+.++.
T Consensus 69 d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 69 DPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred cccceEEeecccccchhhhhhhhhhhh
Confidence 378999999999998888888777775
No 14
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=73.65 E-value=2.5 Score=35.98 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=17.4
Q ss_pred ccceeeeeccChhhHHHHHHHH
Q 025935 11 NAQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D 32 (246)
..+++.|.|.|+||..++.-+-
T Consensus 93 d~~~i~l~G~S~Gg~~a~~~a~ 114 (212)
T TIGR01840 93 DPNRVYVTGLSAGGGMTAVLGC 114 (212)
T ss_pred ChhheEEEEECHHHHHHHHHHH
Confidence 3468999999999988766543
No 15
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=73.06 E-value=2.1 Score=38.17 Aligned_cols=25 Identities=16% Similarity=0.226 Sum_probs=20.1
Q ss_pred cceeeeeccChhhHHHHHHHHHHHh
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
.+++.|.|+|+||..++..+-.-.+
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~~p~ 161 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALKNPD 161 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHhCcc
Confidence 4689999999999999887755433
No 16
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=72.59 E-value=6 Score=37.20 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=25.3
Q ss_pred HHHhcccccceeeeeccChhhHHHHHHHHHHHh
Q 025935 4 LMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 4 Ll~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
++.+|.+- ++|.|+|.||||--|..=+.++++
T Consensus 158 ~~~~~~D~-~rv~l~GDSaGGNia~~va~r~~~ 189 (336)
T KOG1515|consen 158 WLKLGADP-SRVFLAGDSAGGNIAHVVAQRAAD 189 (336)
T ss_pred HHHhCCCc-ccEEEEccCccHHHHHHHHHHHhh
Confidence 45555544 459999999999999888888886
No 17
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=72.38 E-value=2.2 Score=43.46 Aligned_cols=24 Identities=33% Similarity=0.569 Sum_probs=22.1
Q ss_pred hhHHHhcccccceeeeeccChhhH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGL 25 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl 25 (246)
+.|+..|....+.++..|+||||+
T Consensus 516 ~~Lv~~g~~~~~~i~a~GGSAGGm 539 (682)
T COG1770 516 RHLVKEGYTSPDRIVAIGGSAGGM 539 (682)
T ss_pred HHHHHcCcCCccceEEeccCchhH
Confidence 568888999999999999999996
No 18
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=72.37 E-value=5.8 Score=31.90 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=24.5
Q ss_pred hHHHhccc--ccceeeeeccChhhHHHHHHHHHHHhhC
Q 025935 3 DLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALF 38 (246)
Q Consensus 3 dLl~~Gl~--~A~~viLsG~SAGGlg~~l~~D~~~~~L 38 (246)
.++.+++. ...+++++|+|.||-=+.+-+-+++...
T Consensus 16 ~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 16 PLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred HHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 34445443 4679999999999966666566666543
No 19
>PLN03037 lipase class 3 family protein; Provisional
Probab=72.09 E-value=10 Score=37.74 Aligned_cols=55 Identities=13% Similarity=0.189 Sum_probs=39.0
Q ss_pred ccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 025935 11 NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 71 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (246)
+...+.++|+|-||-=|.|++-+++..+|....|.+++-+ .+--|+..+.++++.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFG------sPRVGN~aFA~~~~~ 370 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFG------APRVGNLAFKEKLNE 370 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEec------CCCccCHHHHHHHHh
Confidence 4457999999999999999999898887753344444432 345577776666654
No 20
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=71.52 E-value=1 Score=45.32 Aligned_cols=97 Identities=19% Similarity=0.127 Sum_probs=51.6
Q ss_pred HhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCc-hhHHHHHHHHHHhhccccccCCc
Q 025935 6 AKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSG-ASHIEQFYAQVVATHGSAKHLPA 84 (246)
Q Consensus 6 ~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g-~~~~~~~~~~vv~~~~~~~~lp~ 84 (246)
..|+-..+++-++|.|.||..|++-+-.-- ++. .+++.+|--=|...... ...++-.+.... .-+.
T Consensus 466 ~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~-----a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 532 (620)
T COG1506 466 KLPLVDPERIGITGGSYGGYMTLLAATKTP-RFK-----AAVAVAGGVDWLLYFGESTEGLRFDPEENG-------GGPP 532 (620)
T ss_pred hCCCcChHHeEEeccChHHHHHHHHHhcCc-hhh-----eEEeccCcchhhhhccccchhhcCCHHHhC-------CCcc
Confidence 347788889999999999998877554433 232 22333331111111110 000111111110 0011
Q ss_pred ccccCCCCCcccchhhhhhccCcchhhhhhhhhH
Q 025935 85 SCTSRLSPGLCFFPQYMARQITTPLFIINAAYDS 118 (246)
Q Consensus 85 ~C~~~~~~~~Cffpq~~~~~i~tP~Filns~YD~ 118 (246)
. ..+.+.=.-|-+..+.|++|++||++..|.
T Consensus 533 ~---~~~~~~~~sp~~~~~~i~~P~LliHG~~D~ 563 (620)
T COG1506 533 E---DREKYEDRSPIFYADNIKTPLLLIHGEEDD 563 (620)
T ss_pred c---ChHHHHhcChhhhhcccCCCEEEEeecCCc
Confidence 0 122244556777889999999999988773
No 21
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=71.51 E-value=2.9 Score=34.62 Aligned_cols=28 Identities=25% Similarity=0.428 Sum_probs=21.9
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D 32 (246)
+-|+.+|+. .-+++|+|||++-+.+++-
T Consensus 18 ~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 18 KALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 456677776 7789999999998776654
No 22
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=68.08 E-value=4.4 Score=31.19 Aligned_cols=23 Identities=22% Similarity=0.312 Sum_probs=19.3
Q ss_pred cccceeeeeccChhhHHHHHHHH
Q 025935 10 KNAQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 10 ~~A~~viLsG~SAGGlg~~l~~D 32 (246)
.+.+.++|.|.|+||..+..-+-
T Consensus 58 ~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 58 PDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp CTCCEEEEEEETHHHHHHHHHHH
T ss_pred CCCCcEEEEEEccCcHHHHHHhh
Confidence 38899999999999987776554
No 23
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=67.72 E-value=7.5 Score=35.00 Aligned_cols=27 Identities=22% Similarity=0.250 Sum_probs=24.1
Q ss_pred ccceeeeeccChhhHHHHHHHHHHHhh
Q 025935 11 NAQNAVLSGCSAGGLTSILHCDNFRAL 37 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D~~~~~ 37 (246)
+.++|.++|+||||.=+..-+...++.
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhc
Confidence 368899999999999999999999976
No 24
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=67.69 E-value=15 Score=33.08 Aligned_cols=62 Identities=24% Similarity=0.287 Sum_probs=41.4
Q ss_pred ccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEE----------ee-ccccccccCCCCchhHHHHHHHHHHh
Q 025935 9 MKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKC----------FA-DAGYFINAKDVSGASHIEQFYAQVVA 74 (246)
Q Consensus 9 l~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~----------l~-DSGfFld~~~~~g~~~~~~~~~~vv~ 74 (246)
++..+.|+++|||-||+|--+--.--++= -.|.+ |. |+|.|.---|++-.+.++.+-..+..
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G----~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNG----YLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCC----eEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 46678999999999999976654433332 22222 33 89988766677776777766666654
No 25
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=67.68 E-value=3.6 Score=39.51 Aligned_cols=29 Identities=28% Similarity=0.471 Sum_probs=21.4
Q ss_pred cccceeeeeccChhhHHHHHHHHHHHhhC
Q 025935 10 KNAQNAVLSGCSAGGLTSILHCDNFRALF 38 (246)
Q Consensus 10 ~~A~~viLsG~SAGGlg~~l~~D~~~~~L 38 (246)
.+++..+|+|.|.||++++.-+=+--+++
T Consensus 285 ~d~~~~~IaG~S~GGl~AL~~al~~Pd~F 313 (411)
T PRK10439 285 DDADRTVVAGQSFGGLAALYAGLHWPERF 313 (411)
T ss_pred CCccceEEEEEChHHHHHHHHHHhCcccc
Confidence 46788999999999999987653333333
No 26
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=64.98 E-value=4.7 Score=35.48 Aligned_cols=30 Identities=30% Similarity=0.459 Sum_probs=21.6
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D 32 (246)
+-|+.+|+.. +...++|+|||++.+.+++-
T Consensus 19 ~~L~e~gi~~-~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 19 SLLIEAGVIN-ETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHcCCCC-CCCEEEEEcHHHHHHHHHHc
Confidence 4566677653 24579999999998877764
No 27
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=64.62 E-value=4.7 Score=38.76 Aligned_cols=24 Identities=25% Similarity=0.275 Sum_probs=20.3
Q ss_pred cccceeeeeccChhhHHHHHHHHH
Q 025935 10 KNAQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 10 ~~A~~viLsG~SAGGlg~~l~~D~ 33 (246)
.+.++|.|.|.||||..+.++.-.
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhC
Confidence 577899999999999988877643
No 28
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=64.27 E-value=3.9 Score=35.89 Aligned_cols=24 Identities=25% Similarity=0.340 Sum_probs=19.1
Q ss_pred cccccceeeeeccChhhHHHHHHH
Q 025935 8 GMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 8 Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
.....+.|+|.|+|.||+-+-.-+
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSAL 103 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHH
Confidence 456889999999999998655443
No 29
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=62.87 E-value=7.2 Score=33.44 Aligned_cols=22 Identities=32% Similarity=0.499 Sum_probs=16.3
Q ss_pred eeeeeccChhhHHHHHHHHHHHhhCC
Q 025935 14 NAVLSGCSAGGLTSILHCDNFRALFP 39 (246)
Q Consensus 14 ~viLsG~SAGGlg~~l~~D~~~~~Lp 39 (246)
.++|.|+|.||.-+ -+++.+++
T Consensus 60 ~~~liGSSlGG~~A----~~La~~~~ 81 (187)
T PF05728_consen 60 NVVLIGSSLGGFYA----TYLAERYG 81 (187)
T ss_pred CeEEEEEChHHHHH----HHHHHHhC
Confidence 49999999999544 45566654
No 30
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=61.60 E-value=5.9 Score=35.13 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=20.9
Q ss_pred hhHHHhcccccc-eeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQ-NAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~-~viLsG~SAGGlg~~l~~ 31 (246)
+-|+.+|..-.. .-.++|+|||++.+.+.+
T Consensus 19 ~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 19 SALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 346666765333 258999999999887655
No 31
>PLN02965 Probable pheophorbidase
Probab=60.52 E-value=13 Score=32.18 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=21.9
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeecc
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 50 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DS 50 (246)
+.++|.|+|.||.-++..+. ..|..++=.++.++
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~----~~p~~v~~lvl~~~ 105 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALC----KFTDKISMAIYVAA 105 (255)
T ss_pred CCEEEEecCcchHHHHHHHH----hCchheeEEEEEcc
Confidence 68999999999986665553 34554443333343
No 32
>PRK10162 acetyl esterase; Provisional
Probab=59.88 E-value=7.2 Score=35.62 Aligned_cols=27 Identities=22% Similarity=0.235 Sum_probs=22.6
Q ss_pred ccceeeeeccChhhHHHHHHHHHHHhh
Q 025935 11 NAQNAVLSGCSAGGLTSILHCDNFRAL 37 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D~~~~~ 37 (246)
+.++|+|.|.||||.-++.-+-.+++.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 467899999999999888888777654
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=59.05 E-value=7.5 Score=34.55 Aligned_cols=24 Identities=33% Similarity=0.563 Sum_probs=19.4
Q ss_pred ccceeeeeccChhhHHHHHHHHHH
Q 025935 11 NAQNAVLSGCSAGGLTSILHCDNF 34 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D~~ 34 (246)
..+.++|.|+|.||+-++..+...
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~ 108 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRF 108 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhC
Confidence 357999999999999888777543
No 34
>PLN02442 S-formylglutathione hydrolase
Probab=58.68 E-value=5.1 Score=35.98 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=19.1
Q ss_pred ccceeeeeccChhhHHHHHHHHH
Q 025935 11 NAQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.+++.|+|.|+||.+++..+-.
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~~ 163 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYLK 163 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 45789999999999999876654
No 35
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=58.63 E-value=7.7 Score=33.31 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=18.0
Q ss_pred eeeeccChhhHHHHHHHHHHHhhC
Q 025935 15 AVLSGCSAGGLTSILHCDNFRALF 38 (246)
Q Consensus 15 viLsG~SAGGlg~~l~~D~~~~~L 38 (246)
..|+|+|.||++|+..+=+--+++
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTTE
T ss_pred eEEeccCCCcHHHHHHHHhCcccc
Confidence 899999999999997554433333
No 36
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=58.49 E-value=7.6 Score=31.05 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=24.6
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccc
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 53 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfF 53 (246)
+.++|.|+|.||.-++..+.+ .|..++=..+.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAAR----YPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHH----SGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccc----cccccccceeeccccc
Confidence 689999999999888777754 4443333334555443
No 37
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=58.30 E-value=6.7 Score=31.21 Aligned_cols=18 Identities=44% Similarity=0.560 Sum_probs=13.7
Q ss_pred eeeeeccChhhHHHHHHH
Q 025935 14 NAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 14 ~viLsG~SAGGlg~~l~~ 31 (246)
--+++|+||||+.+.+.+
T Consensus 28 ~d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLA 45 (204)
T ss_dssp -SEEEEECCHHHHHHHHH
T ss_pred ccEEEEcChhhhhHHHHH
Confidence 457899999999885544
No 38
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=57.99 E-value=15 Score=30.91 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=28.4
Q ss_pred eeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeecc
Q 025935 14 NAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 50 (246)
Q Consensus 14 ~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DS 50 (246)
..+|.|.|.||+=|+-=+-++.+. ...+....+.|+
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred CeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 799999999999999999888887 444555566663
No 39
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=57.89 E-value=8.1 Score=32.92 Aligned_cols=47 Identities=19% Similarity=0.316 Sum_probs=26.4
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeecccccc
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFI 54 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFl 54 (246)
+++++.| -.+++|+|.|.|-||.-++.-+=.-...+ . .++.=||++.
T Consensus 95 ~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~---~--gvv~lsG~~~ 141 (216)
T PF02230_consen 95 DEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPL---A--GVVALSGYLP 141 (216)
T ss_dssp HHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTS---S--EEEEES---T
T ss_pred HHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCc---C--EEEEeecccc
Confidence 4455556 56688999999999988887653222222 1 2344467764
No 40
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=56.52 E-value=8.2 Score=34.44 Aligned_cols=29 Identities=28% Similarity=0.157 Sum_probs=19.1
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+-|+.+|..-... .++|+|||++.+...+
T Consensus 20 ~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 20 VCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 3466666322112 3999999999888754
No 41
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=56.41 E-value=7.8 Score=34.41 Aligned_cols=30 Identities=27% Similarity=0.404 Sum_probs=20.1
Q ss_pred hhHHHhccccccee-eeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNA-VLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~v-iLsG~SAGGlg~~l~~ 31 (246)
+-|+..|..--+.+ .++|+|||++.+.+.+
T Consensus 19 ~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 19 KALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 34555665422233 7899999999888774
No 42
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=56.19 E-value=15 Score=31.16 Aligned_cols=21 Identities=19% Similarity=0.151 Sum_probs=17.2
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.++|.|.|.||.-++..+..
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred CCceEEEECccHHHHHHHHHh
Confidence 567999999999988877643
No 43
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=55.66 E-value=15 Score=32.94 Aligned_cols=27 Identities=19% Similarity=0.192 Sum_probs=21.8
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhhC
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRALF 38 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~L 38 (246)
-+++.|.|+|.||.-+..-+.++..++
T Consensus 111 ~~~i~lIGhSlGa~vAg~~a~~~~~~v 137 (275)
T cd00707 111 LENVHLIGHSLGAHVAGFAGKRLNGKL 137 (275)
T ss_pred hHHEEEEEecHHHHHHHHHHHHhcCcc
Confidence 468999999999998888877665544
No 44
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=55.65 E-value=13 Score=31.23 Aligned_cols=37 Identities=22% Similarity=0.153 Sum_probs=24.0
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCcEEE-Eeecccccc
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVK-CFADAGYFI 54 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~-~l~DSGfFl 54 (246)
+.++|.|+|.|.++++.++. .... .+|+ ++-=|||-.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~---~~~~--~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLA---EQSQ--KKVAGALLVAPFDP 92 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHH---HTCC--SSEEEEEEES--SC
T ss_pred CCeEEEEeCHHHHHHHHHHh---hccc--ccccEEEEEcCCCc
Confidence 34899999999999999987 2232 2344 334566644
No 45
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.61 E-value=4.2 Score=35.35 Aligned_cols=21 Identities=43% Similarity=0.831 Sum_probs=13.6
Q ss_pred eeeeccChhhHHHHHHHHHHHhhCC
Q 025935 15 AVLSGCSAGGLTSILHCDNFRALFP 39 (246)
Q Consensus 15 viLsG~SAGGlg~~l~~D~~~~~Lp 39 (246)
-|.||||.||. |+-.|-=+.|
T Consensus 103 ~~~sgcsmGay----hA~nfvfrhP 123 (227)
T COG4947 103 TIVSGCSMGAY----HAANFVFRHP 123 (227)
T ss_pred ccccccchhhh----hhhhhheeCh
Confidence 57899999994 4444443344
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=52.67 E-value=8 Score=36.98 Aligned_cols=20 Identities=10% Similarity=0.092 Sum_probs=16.5
Q ss_pred ccceeeeeccChhhHHHHHH
Q 025935 11 NAQNAVLSGCSAGGLTSILH 30 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~ 30 (246)
+.++|.+.|.|.||.-++.-
T Consensus 263 d~~ri~l~G~S~GG~~Al~~ 282 (414)
T PRK05077 263 DHTRVAAFGFRFGANVAVRL 282 (414)
T ss_pred CcccEEEEEEChHHHHHHHH
Confidence 56789999999999876643
No 47
>PLN02310 triacylglycerol lipase
Probab=52.19 E-value=43 Score=32.44 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=35.7
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 71 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (246)
...|+++|+|-||-=|.|.+.+++..++. ..|..++-+ .+.-|+..+.+.++.
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~~-~~v~vyTFG------sPRVGN~~Fa~~~~~ 260 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIPD-LFVSVISFG------APRVGNIAFKEKLNE 260 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCcC-cceeEEEec------CCCcccHHHHHHHHh
Confidence 34799999999998888888888876653 234443332 345566666665554
No 48
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=51.33 E-value=12 Score=30.68 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=22.1
Q ss_pred hHHHh-cccccceeeeeccChhhHHHHHHHHHHHh
Q 025935 3 DLMAK-GMKNAQNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 3 dLl~~-Gl~~A~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
.++.+ |.++ +.+.|.|.||.=++.++...-+
T Consensus 36 ~~~~~l~~~~---~~~vG~S~Gg~~~~~~a~~~p~ 67 (230)
T PF00561_consen 36 ALREALGIKK---INLVGHSMGGMLALEYAAQYPE 67 (230)
T ss_dssp HHHHHHTTSS---EEEEEETHHHHHHHHHHHHSGG
T ss_pred HHHHHhCCCC---eEEEEECCChHHHHHHHHHCch
Confidence 34443 4444 9999999999888887755444
No 49
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=49.78 E-value=12 Score=31.12 Aligned_cols=27 Identities=30% Similarity=0.455 Sum_probs=18.9
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+.|...|+.- -+++|.|||++-+.+.+
T Consensus 19 ~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 19 KALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 3455556543 68899999998766655
No 50
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=49.01 E-value=12 Score=33.46 Aligned_cols=29 Identities=28% Similarity=0.242 Sum_probs=18.4
Q ss_pred hHHHhccc-ccceeeeeccChhhHHHHHHH
Q 025935 3 DLMAKGMK-NAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 3 dLl~~Gl~-~A~~viLsG~SAGGlg~~l~~ 31 (246)
-|+.+|.. -.+.-.++|+|||++.+...+
T Consensus 25 ~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a 54 (249)
T cd07220 25 CLLEHAPFLVANARKIYGASAGALTATALV 54 (249)
T ss_pred HHHhcCCcccccCCeEEEEcHHHHHHHHHH
Confidence 35555543 112356889999999887643
No 51
>PLN02324 triacylglycerol lipase
Probab=48.88 E-value=54 Score=31.84 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=33.2
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhC---------CCCcEEEEeeccccccccCCCCchhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALF---------PVGTKVKCFADAGYFINAKDVSGASHIEQFYAQV 72 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~L---------p~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~v 72 (246)
..|+++|+|-||-=|.|.+-++.... +....|..++- -.+--|+..+.++++..
T Consensus 215 ~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TF------GsPRVGN~~Fa~~~~~~ 277 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAF------GSPRIGDHNFKNLVDSL 277 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEe------cCCCcCCHHHHHHHHhc
Confidence 36999999999988888877665531 12233433332 23455777766666543
No 52
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=47.57 E-value=15 Score=30.38 Aligned_cols=26 Identities=27% Similarity=0.496 Sum_probs=18.0
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILH 30 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~ 30 (246)
+.|+..|+ .-=+++|.|||++-+.+.
T Consensus 20 ~~L~e~g~---~~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 20 RALEEEGI---EIDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHCCC---CeeEEEEeCHHHHHHHHH
Confidence 34555665 356889999999855444
No 53
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=46.27 E-value=16 Score=30.03 Aligned_cols=27 Identities=30% Similarity=0.464 Sum_probs=19.9
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+.|..+|+. --+++|.|||++-+.+.+
T Consensus 20 ~~L~~~~~~---~d~i~GtSaGal~a~~~a 46 (175)
T cd07205 20 KALEEAGIP---IDIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHcCCC---eeEEEEECHHHHHHHHHH
Confidence 456666763 458899999999876665
No 54
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=45.99 E-value=26 Score=31.83 Aligned_cols=53 Identities=17% Similarity=0.237 Sum_probs=37.6
Q ss_pred hHHH-hcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcE--EEEeecccccccc
Q 025935 3 DLMA-KGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTK--VKCFADAGYFINA 56 (246)
Q Consensus 3 dLl~-~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~--V~~l~DSGfFld~ 56 (246)
+|.. .|+....++.|.|.|=||.|++.-+ .++...-+... +++.+=.|.=.|.
T Consensus 60 ~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA-~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 60 NLPPKLGLSPSSRVALWGYSQGGQAALWAA-ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred hcccccCCCCCCCEEEEeeCccHHHHHHHH-HHhHHhCcccccceeEEeccCCccCH
Confidence 3444 3788889999999999999997655 45544444566 8888766654443
No 55
>PRK04940 hypothetical protein; Provisional
Probab=45.82 E-value=21 Score=30.64 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=20.1
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCC
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFP 39 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp 39 (246)
+.++|.|+|-|| +++.++..+..
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 579999999999 78888888875
No 56
>PRK13604 luxD acyl transferase; Provisional
Probab=45.04 E-value=18 Score=33.65 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=24.2
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhhCCCCcEEE-Eeeccccc
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVK-CFADAGYF 53 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~-~l~DSGfF 53 (246)
.+.+.|.|+|.||..+++-+.. + . |+ .+.||||.
T Consensus 107 ~~~I~LiG~SmGgava~~~A~~-----~-~--v~~lI~~sp~~ 141 (307)
T PRK13604 107 INNLGLIAASLSARIAYEVINE-----I-D--LSFLITAVGVV 141 (307)
T ss_pred CCceEEEEECHHHHHHHHHhcC-----C-C--CCEEEEcCCcc
Confidence 4679999999999987655421 1 1 33 67899975
No 57
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=43.83 E-value=23 Score=32.97 Aligned_cols=27 Identities=30% Similarity=0.395 Sum_probs=21.5
Q ss_pred ccccceeeeeccChhhHHHHHHHHHHHhhCC
Q 025935 9 MKNAQNAVLSGCSAGGLTSILHCDNFRALFP 39 (246)
Q Consensus 9 l~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp 39 (246)
...|+.+.|.|+|+||+-+. |+...++
T Consensus 123 ~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 35679999999999999887 5555555
No 58
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=43.78 E-value=8.2 Score=36.67 Aligned_cols=17 Identities=35% Similarity=0.470 Sum_probs=15.0
Q ss_pred cceeeeeccChhhHHHH
Q 025935 12 AQNAVLSGCSAGGLTSI 28 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~ 28 (246)
-++|.++|+|-||.+++
T Consensus 227 ~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATAL 243 (379)
T ss_dssp EEEEEEEEETHHHHHHH
T ss_pred hhheeeeecCchHHHHH
Confidence 46699999999999888
No 59
>PLN02571 triacylglycerol lipase
Probab=43.38 E-value=63 Score=31.38 Aligned_cols=53 Identities=21% Similarity=0.305 Sum_probs=33.8
Q ss_pred eeeeeccChhhHHHHHHHHHHHhh-CCC-------CcEEEEeeccccccccCCCCchhHHHHHHHHH
Q 025935 14 NAVLSGCSAGGLTSILHCDNFRAL-FPV-------GTKVKCFADAGYFINAKDVSGASHIEQFYAQV 72 (246)
Q Consensus 14 ~viLsG~SAGGlg~~l~~D~~~~~-Lp~-------~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~v 72 (246)
.|+++|+|-||.=|.|.+-+++.. +.+ .+.|.+++-+ .+--|+..+.++++..
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFG------sPRVGN~~Fa~~~~~~ 287 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFA------SPRVGDSDFKKLFSGL 287 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeC------CCCccCHHHHHHHhcc
Confidence 589999999998888887777653 321 2334544432 3445777766666543
No 60
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=43.30 E-value=16 Score=33.54 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=24.6
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHHHHh--hCCC
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA--LFPV 40 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~--~Lp~ 40 (246)
.+|... -+-+.+=+.|+|+||+|...+.-.... -||+
T Consensus 127 syL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 127 SYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred HHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc
Confidence 344443 223455678999999999888766653 3664
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=43.16 E-value=23 Score=28.21 Aligned_cols=23 Identities=26% Similarity=0.283 Sum_probs=18.3
Q ss_pred eeeeccChhhHHHHHHHHHHHhh
Q 025935 15 AVLSGCSAGGLTSILHCDNFRAL 37 (246)
Q Consensus 15 viLsG~SAGGlg~~l~~D~~~~~ 37 (246)
++|.|+|.||.-++..+....+.
T Consensus 90 ~~l~G~S~Gg~~~~~~~~~~p~~ 112 (282)
T COG0596 90 VVLVGHSMGGAVALALALRHPDR 112 (282)
T ss_pred eEEEEecccHHHHHHHHHhcchh
Confidence 99999999998777776655553
No 62
>PLN02719 triacylglycerol lipase
Probab=42.89 E-value=69 Score=32.04 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=35.6
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhh-CCC-----CcEEEEeeccccccccCCCCchhHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRAL-FPV-----GTKVKCFADAGYFINAKDVSGASHIEQFYAQ 71 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~-Lp~-----~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (246)
...|+++|+|-||-=|.|.+-+++.. ++. .+.|.+++-+ .+--|+..+.+.++.
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFG------sPRVGN~~Fa~~~~~ 356 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYG------GPRVGNIRFKERIEE 356 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEec------CCCccCHHHHHHHHh
Confidence 35899999999999888999888875 431 1234444422 345577666666543
No 63
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.80 E-value=18 Score=31.22 Aligned_cols=27 Identities=26% Similarity=0.511 Sum_probs=19.8
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+.|...|+ .--+++|.|||++-+.+.+
T Consensus 18 ~aL~e~g~---~~d~i~GtS~GAl~aa~~a 44 (215)
T cd07209 18 KALAEAGI---EPDIISGTSIGAINGALIA 44 (215)
T ss_pred HHHHHcCC---CCCEEEEECHHHHHHHHHH
Confidence 45666676 4668999999998665554
No 64
>PRK10349 carboxylesterase BioH; Provisional
Probab=41.38 E-value=23 Score=30.30 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=20.7
Q ss_pred hHHHhcccccceeeeeccChhhHHHHHHHHHH
Q 025935 3 DLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 34 (246)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~ 34 (246)
+++..++ +.++|.|.|.||.-++..+-+.
T Consensus 67 ~l~~~~~---~~~~lvGhS~Gg~ia~~~a~~~ 95 (256)
T PRK10349 67 AVLQQAP---DKAIWLGWSLGGLVASQIALTH 95 (256)
T ss_pred HHHhcCC---CCeEEEEECHHHHHHHHHHHhC
Confidence 4454443 5789999999999888665443
No 65
>PRK00870 haloalkane dehalogenase; Provisional
Probab=40.81 E-value=36 Score=30.07 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=22.8
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeecccc
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGY 52 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGf 52 (246)
+.++|.|+|.||.=++.-+-. -|..+.=..+.+++.
T Consensus 115 ~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 115 TDVTLVCQDWGGLIGLRLAAE----HPDRFARLVVANTGL 150 (302)
T ss_pred CCEEEEEEChHHHHHHHHHHh----ChhheeEEEEeCCCC
Confidence 568999999999766654433 344433334456553
No 66
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.20 E-value=20 Score=31.65 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=20.1
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+.|+.+|+. .-=+++|.|||++=+.+.+
T Consensus 18 ~al~e~~~~--~fd~i~GtSaGAi~a~~~~ 45 (266)
T cd07208 18 DAFLEAGIR--PFDLVIGVSAGALNAASYL 45 (266)
T ss_pred HHHHHcCCC--CCCEEEEECHHHHhHHHHH
Confidence 456667775 4558899999998766543
No 67
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=40.20 E-value=28 Score=31.17 Aligned_cols=27 Identities=22% Similarity=0.207 Sum_probs=20.9
Q ss_pred ccccceeeeeccChhhHHHHHHHHHHH
Q 025935 9 MKNAQNAVLSGCSAGGLTSILHCDNFR 35 (246)
Q Consensus 9 l~~A~~viLsG~SAGGlg~~l~~D~~~ 35 (246)
..+++.+++.|+|||+-=++.-+-+.|
T Consensus 132 ~~n~k~l~~gGHSaGAHLa~qav~R~r 158 (270)
T KOG4627|consen 132 TENTKVLTFGGHSAGAHLAAQAVMRQR 158 (270)
T ss_pred cccceeEEEcccchHHHHHHHHHHHhc
Confidence 578999999999999976665555544
No 68
>TIGR02747 TraV type IV conjugative transfer system lipoprotein TraV. The TraV protein is a component of conjugative type IV secretion systems. TraV is an outer membrane lipoprotein and is believed to interact with the secretin TraK. The alignment contains three conserved cysteines in the N-terminal half.
Probab=39.85 E-value=7.8 Score=32.21 Aligned_cols=8 Identities=75% Similarity=1.452 Sum_probs=6.7
Q ss_pred eeeccChh
Q 025935 16 VLSGCSAG 23 (246)
Q Consensus 16 iLsG~SAG 23 (246)
+|+|||||
T Consensus 14 lLtGCsag 21 (144)
T TIGR02747 14 FLTGCSAG 21 (144)
T ss_pred HhhcccCC
Confidence 39999996
No 69
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=39.65 E-value=77 Score=29.51 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=35.8
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhh-CCCCcEEEEeeccccccccCCCCchhHHHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRAL-FPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVV 73 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~-Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv 73 (246)
--.|.++|+|.||-=|.+-+.++... +.....|+.+.=+ .+..|+..+.+.++..+
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG------~PRvGn~~fa~~~d~~~ 226 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFG------QPRVGNLAFAEWHDELV 226 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEec------CCCcccHHHHHHHHhhC
Confidence 55899999999996666666666544 4333455555543 35667777666666543
No 70
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=39.13 E-value=23 Score=28.63 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=18.7
Q ss_pred cceeeeeccChhhHHHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNF 34 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~ 34 (246)
.+.++|.|.|+||.-++..+-+.
T Consensus 69 ~~~~~l~G~S~Gg~ia~~~a~~~ 91 (251)
T TIGR03695 69 IEPFFLVGYSMGGRIALYYALQY 91 (251)
T ss_pred CCeEEEEEeccHHHHHHHHHHhC
Confidence 46788999999999888777654
No 71
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=38.75 E-value=23 Score=29.76 Aligned_cols=21 Identities=24% Similarity=0.165 Sum_probs=16.9
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.++|.|.|.||.=++..+-.
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHh
Confidence 459999999999977776643
No 72
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=38.71 E-value=21 Score=29.53 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=17.7
Q ss_pred cceeeeeccChhhHHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~ 33 (246)
.++++|.|.|.||.-++..+..
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALR 100 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHH
Confidence 3579999999999888776544
No 73
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=38.31 E-value=26 Score=34.09 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=17.5
Q ss_pred cceeeeeccChhhHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D 32 (246)
.+.|+|.|+|+||+-+...+.
T Consensus 161 ~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 161 GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred CCCEEEEEECHhHHHHHHHHH
Confidence 578999999999998876553
No 74
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=38.25 E-value=25 Score=30.90 Aligned_cols=21 Identities=19% Similarity=0.265 Sum_probs=16.8
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.++|.|.|.||.-++..+-+
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~ 122 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVD 122 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHh
Confidence 678999999999877666543
No 75
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.62 E-value=26 Score=30.59 Aligned_cols=27 Identities=33% Similarity=0.533 Sum_probs=19.7
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+.|...|+. --+++|.|||++-+.+.+
T Consensus 20 ~aL~e~gi~---~~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 20 AALLEMGLE---PSAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHcCCC---ceEEEEeCHHHHHHHHHH
Confidence 446666663 447999999999777666
No 76
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=37.37 E-value=25 Score=31.70 Aligned_cols=29 Identities=28% Similarity=0.363 Sum_probs=19.8
Q ss_pred cceeeeeccChhhHHHHHHHHHHH--hhCCC
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFR--ALFPV 40 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~--~~Lp~ 40 (246)
-+++-+.|+|.||++++...-.-. ..||+
T Consensus 102 ~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~ 132 (255)
T PF06028_consen 102 FKKFNLVGHSMGGLSWTYYLENYGNDKNLPK 132 (255)
T ss_dssp -SEEEEEEETHHHHHHHHHHHHCTTGTTS-E
T ss_pred CCEEeEEEECccHHHHHHHHHHhccCCCCcc
Confidence 467889999999999986655433 23554
No 77
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=36.89 E-value=25 Score=31.58 Aligned_cols=20 Identities=30% Similarity=0.252 Sum_probs=16.0
Q ss_pred ceeeeeccChhhHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D 32 (246)
..++|.|.|.||.-++..+.
T Consensus 134 ~~i~l~GhSmGG~ia~~~a~ 153 (330)
T PLN02298 134 LPRFLYGESMGGAICLLIHL 153 (330)
T ss_pred CCEEEEEecchhHHHHHHHh
Confidence 35899999999988876543
No 78
>PLN00021 chlorophyllase
Probab=36.70 E-value=22 Score=32.80 Aligned_cols=24 Identities=25% Similarity=0.228 Sum_probs=19.7
Q ss_pred cceeeeeccChhhHHHHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFR 35 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~ 35 (246)
.+++.|.|+|+||..++.-+-...
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhcc
Confidence 478999999999999988775444
No 79
>COG2074 2-phosphoglycerate kinase [Carbohydrate transport and metabolism]
Probab=36.20 E-value=53 Score=30.28 Aligned_cols=68 Identities=16% Similarity=0.353 Sum_probs=48.0
Q ss_pred hcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhccccccCCccc
Q 025935 7 KGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPASC 86 (246)
Q Consensus 7 ~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv~~~~~~~~lp~~C 86 (246)
++|.+...+++.|-| |.|.-.=+-+++.+|. +..+-+..++|+++..++
T Consensus 84 r~~~~p~IILIGGas--GVGkStIA~ElA~rLg----------------I~~visTD~IREvlR~ii------------- 132 (299)
T COG2074 84 RKMKRPLIILIGGAS--GVGKSTIAGELARRLG----------------IRSVISTDSIREVLRKII------------- 132 (299)
T ss_pred hccCCCeEEEecCCC--CCChhHHHHHHHHHcC----------------CceeecchHHHHHHHHhC-------------
Confidence 377888888888766 6666666778888874 234456677899888876
Q ss_pred ccCCCCCcccchhhhhhccCcchhhhhhhhhHHHHh
Q 025935 87 TSRLSPGLCFFPQYMARQITTPLFIINAAYDSWQIK 122 (246)
Q Consensus 87 ~~~~~~~~Cffpq~~~~~i~tP~Filns~YD~wQl~ 122 (246)
++.++|+|.+ |.||+|+--
T Consensus 133 -----------~~~l~PtLh~------Ssy~Awkal 151 (299)
T COG2074 133 -----------SPELLPTLHT------SSYDAWKAL 151 (299)
T ss_pred -----------CHHhcchhhH------hHHHHHHHh
Confidence 2336677554 788999854
No 80
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=36.08 E-value=39 Score=30.91 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=24.0
Q ss_pred ce-eeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccc
Q 025935 13 QN-AVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 53 (246)
Q Consensus 13 ~~-viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfF 53 (246)
+. ++|.|.|.||.=++..+-.. |..++=.++.+++..
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAIDY----PERVRAIVVLATSAR 163 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHHC----hHhhheEEEEccCCc
Confidence 34 99999999998777776553 433333345555543
No 81
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=35.98 E-value=26 Score=32.34 Aligned_cols=29 Identities=21% Similarity=0.390 Sum_probs=21.5
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.|+.+|+. --+++|+|||++=+.+++-.
T Consensus 35 ~aLee~gi~---~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 35 KALEEAGIP---VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHcCCC---CCEEEEECHHHHHHHHHHcC
Confidence 456667774 67889999999877776643
No 82
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=35.79 E-value=29 Score=28.36 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=21.5
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+-|..+|+.+ .--.++|.|||++-+...+
T Consensus 18 ~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 18 SALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 3455566652 4568899999999888887
No 83
>PLN00413 triacylglycerol lipase
Probab=35.49 E-value=72 Score=31.60 Aligned_cols=24 Identities=33% Similarity=0.416 Sum_probs=19.7
Q ss_pred ceeeeeccChhhHHHHHHHHHHHh
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
.+++++|+|.||-=|.+.+.+++.
T Consensus 284 ~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 284 SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred CeEEEEecCHHHHHHHHHHHHHHh
Confidence 469999999999888888777653
No 84
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=34.67 E-value=47 Score=29.95 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=30.2
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYA 70 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~ 70 (246)
.+.++|.|.|.||.=++..+-+ .|.. |. |+.+..+-++|...++.++.
T Consensus 98 ~~~v~LvG~SmGG~vAl~~A~~----~p~~--v~-----~lVL~~P~~~g~~~l~~~lr 145 (266)
T TIGR03101 98 HPPVTLWGLRLGALLALDAANP----LAAK--CN-----RLVLWQPVVSGKQQLQQFLR 145 (266)
T ss_pred CCCEEEEEECHHHHHHHHHHHh----Cccc--cc-----eEEEeccccchHHHHHHHHH
Confidence 4679999999999877765432 3432 21 23333455777777776544
No 85
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=34.50 E-value=36 Score=29.27 Aligned_cols=27 Identities=26% Similarity=0.332 Sum_probs=20.8
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhhC
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRALF 38 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~L 38 (246)
.++++|.|+|.||.-++..+-+..+++
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v 126 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFALEYPDRI 126 (282)
T ss_pred CCCeeEEEECchHHHHHHHHHhChHhh
Confidence 458899999999999888776544443
No 86
>PRK11460 putative hydrolase; Provisional
Probab=34.09 E-value=32 Score=29.85 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=16.8
Q ss_pred cceeeeeccChhhHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~ 31 (246)
.++|+|.|.|.||.-++..+
T Consensus 102 ~~~i~l~GfS~Gg~~al~~a 121 (232)
T PRK11460 102 ASATALIGFSQGAIMALEAV 121 (232)
T ss_pred hhhEEEEEECHHHHHHHHHH
Confidence 47899999999999887544
No 87
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=33.93 E-value=29 Score=33.56 Aligned_cols=29 Identities=24% Similarity=0.562 Sum_probs=21.1
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~ 33 (246)
+-|+.+|+.- =+++|+|||++-+.+.|-+
T Consensus 93 kaL~E~gl~p---~vIsGTSaGAivAal~as~ 121 (421)
T cd07230 93 KALFEANLLP---RIISGSSAGSIVAAILCTH 121 (421)
T ss_pred HHHHHcCCCC---CEEEEECHHHHHHHHHHcC
Confidence 4566777753 2799999999988776643
No 88
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=33.87 E-value=37 Score=30.07 Aligned_cols=20 Identities=15% Similarity=0.157 Sum_probs=17.2
Q ss_pred cceeeeeccChhhHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~ 31 (246)
.++++|.|.|.||+-++..+
T Consensus 99 ~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 99 LRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred CCcEEEEEECHHHHHHHHHh
Confidence 36799999999999988775
No 89
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=33.16 E-value=32 Score=28.00 Aligned_cols=21 Identities=33% Similarity=0.414 Sum_probs=16.9
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.++|.|.|.||.-++..+-.
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred CceEEEEeCchHHHHHHHHHH
Confidence 578999999999887766643
No 90
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=32.95 E-value=22 Score=36.43 Aligned_cols=25 Identities=36% Similarity=0.570 Sum_probs=22.6
Q ss_pred hhHHHhcccccceeeeeccChhhHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLT 26 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg 26 (246)
+.|..+|..+-+.+-+.|.|||||=
T Consensus 538 eyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 538 EYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred HHHHHcCCCCccceeEecccCccch
Confidence 5788899999999999999999973
No 91
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=32.78 E-value=25 Score=34.87 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=25.8
Q ss_pred cccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEe
Q 025935 8 GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCF 47 (246)
Q Consensus 8 Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l 47 (246)
|++ ++++||||=|+|-.||+++. +.|.+.+-|.+=
T Consensus 353 gF~-~~qLILSGlSMGTfgAlYYg----a~l~P~AIiVgK 387 (511)
T TIGR03712 353 GFD-HDQLILSGLSMGTFGALYYG----AKLSPHAIIVGK 387 (511)
T ss_pred CCC-HHHeeeccccccchhhhhhc----ccCCCceEEEcC
Confidence 664 57899999999999999876 456555444443
No 92
>PRK10673 acyl-CoA esterase; Provisional
Probab=32.71 E-value=48 Score=27.90 Aligned_cols=21 Identities=24% Similarity=0.291 Sum_probs=17.0
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
++++|.|+|.||.-++..+-+
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTAL 101 (255)
T ss_pred CceEEEEECHHHHHHHHHHHh
Confidence 568999999999988766644
No 93
>PLN02932 3-ketoacyl-CoA synthase
Probab=31.97 E-value=68 Score=31.69 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=30.3
Q ss_pred ccc-ccceeeee--ccChhhHHHHHHHHHHHhhCCCCcEEEE
Q 025935 8 GMK-NAQNAVLS--GCSAGGLTSILHCDNFRALFPVGTKVKC 46 (246)
Q Consensus 8 Gl~-~A~~viLs--G~SAGGlg~~l~~D~~~~~Lp~~~~V~~ 46 (246)
||+ ++...-|+ |||||-.|.-+-.+.++..-.+.+-|.+
T Consensus 195 Glr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVs 236 (478)
T PLN02932 195 KLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVS 236 (478)
T ss_pred CCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 996 78888887 9999999998888888876545444443
No 94
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=31.62 E-value=30 Score=30.42 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=22.7
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCC
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 40 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~ 40 (246)
++|..+-=-+.++|.++|-|+||--+. .+....|.
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 445554333567999999999995543 44445564
No 95
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=30.98 E-value=67 Score=30.65 Aligned_cols=48 Identities=21% Similarity=0.313 Sum_probs=31.0
Q ss_pred hhHHHhcc-cccceeeeeccChhhHHHHHHHHHHHhh-C--CCCcEEEEeecccc
Q 025935 2 EDLMAKGM-KNAQNAVLSGCSAGGLTSILHCDNFRAL-F--PVGTKVKCFADAGY 52 (246)
Q Consensus 2 ~dLl~~Gl-~~A~~viLsG~SAGGlg~~l~~D~~~~~-L--p~~~~V~~l~DSGf 52 (246)
+.|..+.- -+|+++++-|.|-||. ..+.-+++. + ...++...+.|-||
T Consensus 203 ~yL~d~~~G~ka~~Ii~yG~SLGG~---Vqa~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 203 RYLRDEEQGPKAKNIILYGHSLGGG---VQAEALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHhcccCCChheEEEeeccccHH---HHHHHHHhcccccCCCeeEEEEecCCc
Confidence 45555322 3799999999999985 233344442 2 22577778888885
No 96
>PLN02753 triacylglycerol lipase
Probab=30.94 E-value=1.3e+02 Score=30.32 Aligned_cols=54 Identities=15% Similarity=0.196 Sum_probs=36.4
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhh-CCC-----CcEEEEeeccccccccCCCCchhHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRAL-FPV-----GTKVKCFADAGYFINAKDVSGASHIEQFYAQ 71 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~-Lp~-----~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (246)
-..|+++|+|-||-=|.|.+-+++.. ++. .+.|.+++-+ .+--|+..+.++++.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFG------sPRVGN~aFA~~~~~ 370 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYG------GPRVGNVRFKDRMEE 370 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeC------CCCccCHHHHHHHHh
Confidence 45899999999999888988888764 321 2334544433 355577776666653
No 97
>TIGR00300 conserved hypothetical protein TIGR00300. All members of the family come from genome projects. A partial length search brings in two plant lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzymes hitting the N-terminal region of the family.
Probab=29.48 E-value=56 Score=31.58 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=32.9
Q ss_pred hHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEe
Q 025935 3 DLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCF 47 (246)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l 47 (246)
+-|++-+++|+.|| -+||+||.=-+.+++|+.+++.|+
T Consensus 331 ~amR~~~~~a~~vi-------mlaTmLHSIAtGNm~Ps~v~~~cV 368 (407)
T TIGR00300 331 SKMRELLQGADMVL-------MLSTMLHSIAVGNLLPSGVKTICV 368 (407)
T ss_pred HHHHHHhccCCeeh-------hHHHHHHHHhhcccccccceEEEE
Confidence 44667789999999 899999999999999998877765
No 98
>PRK10279 hypothetical protein; Provisional
Probab=29.25 E-value=39 Score=31.12 Aligned_cols=27 Identities=26% Similarity=0.513 Sum_probs=20.4
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+-|...|+. --+++|+|||++-+-+.+
T Consensus 25 ~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 25 NALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 456666774 678999999998776655
No 99
>PLN02162 triacylglycerol lipase
Probab=29.05 E-value=55 Score=32.36 Aligned_cols=56 Identities=21% Similarity=0.248 Sum_probs=33.1
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCc--EEEEeeccccccccCCCCchhHHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGT--KVKCFADAGYFINAKDVSGASHIEQFYAQVV 73 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~--~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv 73 (246)
.+++++|+|-||-=|.+.+-.++..-.... ++. +.+---.+--|+..+.++++..+
T Consensus 278 ~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~-----~vYTFGqPRVGn~~FA~~~~~~~ 335 (475)
T PLN02162 278 LKYILTGHSLGGALAALFPAILAIHGEDELLDKLE-----GIYTFGQPRVGDEDFGEFMKGVV 335 (475)
T ss_pred ceEEEEecChHHHHHHHHHHHHHHccccccccccc-----eEEEeCCCCccCHHHHHHHHhhh
Confidence 479999999999888888777664322110 111 12222344456766666666544
No 100
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=28.62 E-value=67 Score=30.41 Aligned_cols=21 Identities=29% Similarity=0.294 Sum_probs=17.0
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.++|.|+|.||.-++..+-.
T Consensus 176 ~~~~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 176 SNFILLGHSFGGYVAAKYALK 196 (402)
T ss_pred CCeEEEEECHHHHHHHHHHHh
Confidence 468999999999988766644
No 101
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=28.48 E-value=44 Score=30.86 Aligned_cols=17 Identities=35% Similarity=0.618 Sum_probs=13.9
Q ss_pred ceeeeeccChhhHHHHH
Q 025935 13 QNAVLSGCSAGGLTSIL 29 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l 29 (246)
+.++|.|.|.||+-++.
T Consensus 155 ~~~~lvGhS~Gg~ia~~ 171 (360)
T PLN02679 155 KPTVLIGNSVGSLACVI 171 (360)
T ss_pred CCeEEEEECHHHHHHHH
Confidence 57899999999976654
No 102
>PLN02377 3-ketoacyl-CoA synthase
Probab=28.38 E-value=81 Score=31.38 Aligned_cols=38 Identities=26% Similarity=0.277 Sum_probs=28.4
Q ss_pred ccc-ccceeeee--ccChhhHHHHHHHHHHHhhCCCCcEEE
Q 025935 8 GMK-NAQNAVLS--GCSAGGLTSILHCDNFRALFPVGTKVK 45 (246)
Q Consensus 8 Gl~-~A~~viLs--G~SAGGlg~~l~~D~~~~~Lp~~~~V~ 45 (246)
||+ ++...-|+ |||||-.|.-+-.|.++.--.+.+-|.
T Consensus 219 Glr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVV 259 (502)
T PLN02377 219 KLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVV 259 (502)
T ss_pred CCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 998 78888888 899999888888888876533444333
No 103
>PLN02854 3-ketoacyl-CoA synthase
Probab=28.13 E-value=82 Score=31.50 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=28.9
Q ss_pred ccc-ccceeeee--ccChhhHHHHHHHHHHHhhCCCCcEE
Q 025935 8 GMK-NAQNAVLS--GCSAGGLTSILHCDNFRALFPVGTKV 44 (246)
Q Consensus 8 Gl~-~A~~viLs--G~SAGGlg~~l~~D~~~~~Lp~~~~V 44 (246)
||+ ++...-|+ |||||-.|.-+-.|.++.--.+.+-|
T Consensus 235 Glr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLV 274 (521)
T PLN02854 235 KLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVV 274 (521)
T ss_pred CCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEE
Confidence 897 88888887 99999999888888888764444433
No 104
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=28.11 E-value=42 Score=31.12 Aligned_cols=29 Identities=28% Similarity=0.414 Sum_probs=21.2
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~ 33 (246)
+-|+..|+.- -+++|.|||++-+.+.+-+
T Consensus 89 ~aL~e~~l~~---~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 89 KALWEQDLLP---RVISGSSAGAIVAALLGTH 117 (298)
T ss_pred HHHHHcCCCC---CEEEEEcHHHHHHHHHHcC
Confidence 3466667653 3689999999988887754
No 105
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=28.08 E-value=43 Score=28.05 Aligned_cols=22 Identities=23% Similarity=0.181 Sum_probs=17.5
Q ss_pred cceeeeeccChhhHHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~ 33 (246)
-+.++|.|.|.||.-++.-+-+
T Consensus 65 ~~~~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 65 ILPYWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 3689999999999877765543
No 106
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.88 E-value=43 Score=31.43 Aligned_cols=88 Identities=16% Similarity=0.260 Sum_probs=47.9
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhcccccc
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKH 81 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~vv~~~~~~~~ 81 (246)
+-|+..|+.- -+++|+|||++-+.+.+-+--+.|.+ +| ....|..++++.|+..- +.
T Consensus 88 kaL~e~gl~p---~~i~GsSaGAivaa~~~~~t~~El~~-----------~~---~~~~gd~TF~Eay~~tg------r~ 144 (323)
T cd07231 88 RTLVEHQLLP---RVIAGSSVGSIVCAIIATRTDEELQS-----------FF---RALLGDLTFQEAYDRTG------RI 144 (323)
T ss_pred HHHHHcCCCC---CEEEEECHHHHHHHHHHcCCHHHHHH-----------HH---HHHcCcccHHHHHhccC------CE
Confidence 4466677753 35899999999887776543222221 11 33445566666554321 11
Q ss_pred CCcccccCCCCCcccchhhhhhccCcchhhhhhhh
Q 025935 82 LPASCTSRLSPGLCFFPQYMARQITTPLFIINAAY 116 (246)
Q Consensus 82 lp~~C~~~~~~~~Cffpq~~~~~i~tP~Filns~Y 116 (246)
+.= ++...+. .-+..++.|+.+|=.+|-||-
T Consensus 145 lnI-~v~~~~~---~~~~~lln~~T~Pnv~I~sAv 175 (323)
T cd07231 145 LGI-TVCPPRK---SEPPRLLNYLTSPHVVIWSAV 175 (323)
T ss_pred EEE-EEecccC---CCCceeeccCCCCCcHHHHHH
Confidence 111 1111111 124467889999988877754
No 107
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=27.68 E-value=48 Score=31.71 Aligned_cols=38 Identities=24% Similarity=0.412 Sum_probs=28.1
Q ss_pred ccccceeeeeccChhhHHHHHHH----HHHHhhCCCCcEEEE
Q 025935 9 MKNAQNAVLSGCSAGGLTSILHC----DNFRALFPVGTKVKC 46 (246)
Q Consensus 9 l~~A~~viLsG~SAGGlg~~l~~----D~~~~~Lp~~~~V~~ 46 (246)
|+-.+...+.|.|.||.=++.|+ |+++..++-.+..+.
T Consensus 143 LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~ 184 (368)
T COG2021 143 LGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARL 184 (368)
T ss_pred cCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccC
Confidence 44455777889999999999888 788888764333443
No 108
>PLN00415 3-ketoacyl-CoA synthase
Probab=27.60 E-value=97 Score=30.57 Aligned_cols=30 Identities=33% Similarity=0.515 Sum_probs=24.5
Q ss_pred ccc-ccceeeee--ccChhhHHHHHHHHHHHhh
Q 025935 8 GMK-NAQNAVLS--GCSAGGLTSILHCDNFRAL 37 (246)
Q Consensus 8 Gl~-~A~~viLs--G~SAGGlg~~l~~D~~~~~ 37 (246)
||+ ++..+-|+ |||||..|.-+-.|.++..
T Consensus 181 GLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~ 213 (466)
T PLN00415 181 KLKTDVKTYNLSGMGCSAGAISVDLATNLLKAN 213 (466)
T ss_pred CCCCCceEEEeccccchHHHHHHHHHHHHHHhC
Confidence 888 78888887 8999888888888888764
No 109
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=27.51 E-value=46 Score=30.28 Aligned_cols=20 Identities=30% Similarity=0.449 Sum_probs=15.5
Q ss_pred ceeeeeccChhhHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D 32 (246)
+--+++|+|||++-+-+.+.
T Consensus 39 ~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 39 PIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred CccEEEecCHHHHHHHHHHc
Confidence 45789999999986666554
No 110
>PRK07581 hypothetical protein; Validated
Probab=27.27 E-value=56 Score=29.48 Aligned_cols=26 Identities=15% Similarity=0.218 Sum_probs=19.9
Q ss_pred eeeeeccChhhHHHHHHHHHHHhhCC
Q 025935 14 NAVLSGCSAGGLTSILHCDNFRALFP 39 (246)
Q Consensus 14 ~viLsG~SAGGlg~~l~~D~~~~~Lp 39 (246)
.++|.|.|.||.-++..+-+.-+++.
T Consensus 125 ~~~lvG~S~GG~va~~~a~~~P~~V~ 150 (339)
T PRK07581 125 LALVVGWSMGAQQTYHWAVRYPDMVE 150 (339)
T ss_pred eEEEEEeCHHHHHHHHHHHHCHHHHh
Confidence 36899999999988877766555543
No 111
>PRK11071 esterase YqiA; Provisional
Probab=26.57 E-value=53 Score=27.58 Aligned_cols=20 Identities=25% Similarity=0.275 Sum_probs=16.0
Q ss_pred ceeeeeccChhhHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D 32 (246)
+.++|.|.|.||.-++.-+-
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~ 80 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQ 80 (190)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 57999999999987665544
No 112
>PHA02857 monoglyceride lipase; Provisional
Probab=25.57 E-value=45 Score=28.79 Aligned_cols=22 Identities=32% Similarity=0.306 Sum_probs=17.5
Q ss_pred cceeeeeccChhhHHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~ 33 (246)
.+.++|.|.|.||.=++..+.+
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAYK 117 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHHh
Confidence 3568999999999888776654
No 113
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.56 E-value=45 Score=29.86 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=14.3
Q ss_pred eeeeccChhhHHHHHHH
Q 025935 15 AVLSGCSAGGLTSILHC 31 (246)
Q Consensus 15 viLsG~SAGGlg~~l~~ 31 (246)
-.++|.|||++.+...+
T Consensus 34 ~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 34 RMFFGASAGALHCVTFL 50 (252)
T ss_pred CEEEEEcHHHHHHHHHH
Confidence 46899999999888775
No 114
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=25.00 E-value=43 Score=32.41 Aligned_cols=16 Identities=25% Similarity=0.426 Sum_probs=13.5
Q ss_pred eeeccChhhHHHHHHH
Q 025935 16 VLSGCSAGGLTSILHC 31 (246)
Q Consensus 16 iLsG~SAGGlg~~l~~ 31 (246)
-++|+|||+|.+-+++
T Consensus 44 ~iaGaSAGAL~aa~~a 59 (405)
T cd07223 44 RIYGSSSGALNAVSIV 59 (405)
T ss_pred eeeeeCHHHHHHHHHH
Confidence 3899999999888665
No 115
>PLN02578 hydrolase
Probab=24.76 E-value=94 Score=28.51 Aligned_cols=26 Identities=35% Similarity=0.519 Sum_probs=19.5
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhh
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRAL 37 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~ 37 (246)
.+.++|.|.|.||.-++..+-+..++
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~p~~ 176 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGYPEL 176 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhChHh
Confidence 36789999999998777666654443
No 116
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=24.69 E-value=92 Score=30.47 Aligned_cols=26 Identities=19% Similarity=0.061 Sum_probs=19.6
Q ss_pred cccccceeeeeccChhhHHHHHHHHHH
Q 025935 8 GMKNAQNAVLSGCSAGGLTSILHCDNF 34 (246)
Q Consensus 8 Gl~~A~~viLsG~SAGGlg~~l~~D~~ 34 (246)
|+ .-++|.|.|+|.||.-+..-+.+.
T Consensus 115 gl-~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 115 NY-PWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred CC-CCCcEEEEEECHHHHHHHHHHHhC
Confidence 54 457899999999998777665443
No 117
>PRK03592 haloalkane dehalogenase; Provisional
Probab=24.60 E-value=60 Score=28.46 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=22.1
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeecc
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 50 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DS 50 (246)
+.++|.|.|.||.=++..+ .+-|..++=.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWA----ARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHHH----HhChhheeEEEEECC
Confidence 5799999999998777555 344554333333443
No 118
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=24.09 E-value=67 Score=26.00 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=16.9
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.+.|.|.|.||.-++..+.+
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHH
Confidence 578999999999887766543
No 119
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=23.96 E-value=1.1e+02 Score=28.10 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=25.6
Q ss_pred hhHHHh-cccccceeeeeccChhhHHHHHHHHH
Q 025935 2 EDLMAK-GMKNAQNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 2 ~dLl~~-Gl~~A~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.++.| +|+.-++||=-||..||++.++--.|
T Consensus 62 ~~~~~kl~L~~G~~lLDiGCGWG~l~~~aA~~y 94 (283)
T COG2230 62 DLILEKLGLKPGMTLLDIGCGWGGLAIYAAEEY 94 (283)
T ss_pred HHHHHhcCCCCCCEEEEeCCChhHHHHHHHHHc
Confidence 445556 99999999999999999988765444
No 120
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=23.87 E-value=1.3e+02 Score=23.96 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=26.0
Q ss_pred cceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeecc
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 50 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DS 50 (246)
...++|.|.|.||.-++..+-.+.+. +..+.-..+.|+
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~-~~~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEAR-GIPPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhC-CCCCcEEEEEcc
Confidence 34689999999999998888887754 222333344443
No 121
>PF00086 Thyroglobulin_1: Thyroglobulin type-1 repeat; InterPro: IPR000716 Thyroglobulin (Tg) is a large glycoprotein specific to the thyroid gland and is the precursor of the iodinated thyroid hormones thyroxine (T4) and triiodothyronine (T3). The N-terminal section of Tg contains 10 repeats of a domain of about 65 amino acids which is known as the Tg type-1 repeat [, ]. Such a domain has also been found as a single or repeated sequence in the HLA class II associated invariant chain []; human pancreatic carcinoma marker proteins GA733-1 and GA733-2 []; nidogen (entactin), a sulphated glycoprotein which is widely distributed in basement membranes and that is tightly associated with laminin; insulin-like growth factor binding proteins (IGFBP) []; saxiphilin, a transferrin-like protein from Rana catesbeiana (Bull frog) that binds specifically to the neurotoxin saxitoxin []; chum salmon egg cysteine proteinase inhibitor, and equistatin, a thiol-protease inhibitor from Actinia equina (sea anemone) []. The existence of Thyr-1 domains in such a wide variety of proteins raises questions about their activity and function, and their interactions with neighbouring domains. The Thyr-1 and related domains belong to MEROPS proteinase inhibitor family I31, clan IX. Equistatin from A. equina is composed of three Thyr-1 domains; as with other proteins that contains Thyr-1 domains, the thyropins, they bind reversibly and tightly to cysteine proteases (inhibitor family C1). In equistatin inhibition of papain is a function of domain-1. Unusually domain-2 inhibits cathepsin D, an aspartic protease (inhibitor family A1) and has no activity against papain. Domain-3, does not inhibit either papain or cathepsin D, and its function or its target peptidase has yet to be determined [, ].; PDB: 2H7T_A 2DSR_G 1RMJ_A 1ICF_I 1L3H_A 1ZT3_A 2DSQ_H 1ZT5_A.
Probab=23.68 E-value=1e+02 Score=21.65 Aligned_cols=30 Identities=30% Similarity=0.401 Sum_probs=18.4
Q ss_pred HHHHHHHHhhccCCCCceEEeccccccccc
Q 025935 158 RTQFLNALAGLGISSSRGMFIDACYAHCQT 187 (246)
Q Consensus 158 ~~~~~~~l~~~~~~~~~G~F~~SC~~Hc~~ 187 (246)
+..+++.++........++|+|.|-.+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~P~C~~~G~y 34 (68)
T PF00086_consen 5 RERALERLESERSSSSDGVFVPQCDEDGSY 34 (68)
T ss_dssp HHHHHHHHHHHSTSCCSECEEE-B-TTSSB
T ss_pred HHHHHHHHHHhcccCCCCCcCceeCCCCCe
Confidence 344555555445677789999999977543
No 122
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=23.45 E-value=58 Score=29.54 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=19.4
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D 32 (246)
+-|...|+. --+++|.|||++-+-+++-
T Consensus 30 ~aLeE~gi~---~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 30 QALEEAGIP---IDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHcCCC---ccEEEEECHHHHHHHHHHc
Confidence 345555664 6678899999987766654
No 123
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.33 E-value=51 Score=31.72 Aligned_cols=28 Identities=32% Similarity=0.580 Sum_probs=20.1
Q ss_pred hhHHHhcccccceeeeeccChhhHHHHHHHH
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D 32 (246)
+-|+.+|+. -=+++|.|||++-+.+.|-
T Consensus 87 kaL~e~gll---p~iI~GtSAGAivaalla~ 114 (407)
T cd07232 87 KALLDADLL---PNVISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHhCCCC---CCEEEEECHHHHHHHHHHc
Confidence 346666654 2358999999998877765
No 124
>PLN02934 triacylglycerol lipase
Probab=23.32 E-value=79 Score=31.58 Aligned_cols=24 Identities=29% Similarity=0.342 Sum_probs=19.1
Q ss_pred ceeeeeccChhhHHHHHHHHHHHh
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
.+++++|+|-||-=|.+.+-+++.
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred CeEEEeccccHHHHHHHHHHHHHH
Confidence 479999999998777777766653
No 125
>PRK03204 haloalkane dehalogenase; Provisional
Probab=23.15 E-value=64 Score=28.53 Aligned_cols=19 Identities=21% Similarity=0.190 Sum_probs=15.3
Q ss_pred ceeeeeccChhhHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~ 31 (246)
+.++|.|+|.||.=++..+
T Consensus 101 ~~~~lvG~S~Gg~va~~~a 119 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVA 119 (286)
T ss_pred CCEEEEEECccHHHHHHHH
Confidence 5799999999997665554
No 126
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=23.12 E-value=57 Score=29.88 Aligned_cols=22 Identities=23% Similarity=0.273 Sum_probs=17.7
Q ss_pred ccceeeeeccChhhHHHHHHHH
Q 025935 11 NAQNAVLSGCSAGGLTSILHCD 32 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D 32 (246)
..+++.|.|.|.||+-++..+-
T Consensus 134 ~~~~i~lvGhS~GG~i~~~~~~ 155 (350)
T TIGR01836 134 KLDQISLLGICQGGTFSLCYAA 155 (350)
T ss_pred CCCcccEEEECHHHHHHHHHHH
Confidence 3578999999999998776543
No 127
>PRK10749 lysophospholipase L2; Provisional
Probab=23.02 E-value=62 Score=29.33 Aligned_cols=21 Identities=19% Similarity=0.165 Sum_probs=17.3
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.+.|.|+|.||.-++..+..
T Consensus 131 ~~~~l~GhSmGG~ia~~~a~~ 151 (330)
T PRK10749 131 RKRYALAHSMGGAILTLFLQR 151 (330)
T ss_pred CCeEEEEEcHHHHHHHHHHHh
Confidence 678999999999888766654
No 128
>PLN02761 lipase class 3 family protein
Probab=23.00 E-value=2.3e+02 Score=28.44 Aligned_cols=53 Identities=13% Similarity=0.229 Sum_probs=34.5
Q ss_pred ceeeeeccChhhHHHHHHHHHHHhh-CC------CCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRAL-FP------VGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 71 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~~-Lp------~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (246)
..|+++|+|-||-=|.|.+-+++.+ +. ..+.|..++-++ +--|+..+.++++.
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGs------PRVGN~~FA~~~d~ 353 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSG------PRVGNLRFKERCDE 353 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCC------CCcCCHHHHHHHHh
Confidence 4799999999998888888888754 21 122344444333 44567776666654
No 129
>COG3911 Predicted ATPase [General function prediction only]
Probab=22.88 E-value=62 Score=27.65 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=19.4
Q ss_pred ccccceeeeeccChhhHHHHHHH
Q 025935 9 MKNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 9 l~~A~~viLsG~SAGGlg~~l~~ 31 (246)
+..-+.+|||||+-+|-.|++.+
T Consensus 6 ~nR~~~fIltGgpGaGKTtLL~a 28 (183)
T COG3911 6 FNRHKRFILTGGPGAGKTTLLAA 28 (183)
T ss_pred cccceEEEEeCCCCCcHHHHHHH
Confidence 45557999999999999998875
No 130
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=22.66 E-value=40 Score=27.36 Aligned_cols=11 Identities=45% Similarity=0.773 Sum_probs=9.7
Q ss_pred eeeeccChhhH
Q 025935 15 AVLSGCSAGGL 25 (246)
Q Consensus 15 viLsG~SAGGl 25 (246)
+++.|.|||++
T Consensus 70 ~vi~G~SAGA~ 80 (154)
T PF03575_consen 70 GVIIGTSAGAM 80 (154)
T ss_dssp SEEEEETHHHH
T ss_pred CEEEEEChHHh
Confidence 78999999994
No 131
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=22.57 E-value=81 Score=28.10 Aligned_cols=24 Identities=17% Similarity=0.162 Sum_probs=18.2
Q ss_pred ceeeeeccChhhHHHHHHHHHHHh
Q 025935 13 QNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
+.++|.|.|.||.-++..+-...+
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~~~p~ 118 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQTHPE 118 (306)
T ss_pred CCEEEEEECHHHHHHHHHHHHChH
Confidence 468999999999877776654433
No 132
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=22.52 E-value=1e+02 Score=26.49 Aligned_cols=49 Identities=16% Similarity=0.180 Sum_probs=30.2
Q ss_pred hHHHhcccccceeeeeccChhhHHHHHHHHHHHhhCCCCcEEEEeeccccccc
Q 025935 3 DLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFIN 55 (246)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~Lp~~~~V~~l~DSGfFld 55 (246)
-|..+.--+++.|-|-|.|-||--|++-+ +.+|.=..|.+++.|+++.-
T Consensus 12 ~L~~~p~v~~~~Igi~G~SkGaelALllA----s~~~~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 12 WLKSHPEVDPDKIGIIGISKGAELALLLA----SRFPQISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHCSTTB--SSEEEEEETHHHHHHHHHH----HHSSSEEEEEEES--SB--S
T ss_pred HHHhCCCCCCCCEEEEEECHHHHHHHHHH----hcCCCccEEEEeCCceeEec
Confidence 34444445578999999999998877755 55554445677777877653
No 133
>PRK05855 short chain dehydrogenase; Validated
Probab=22.36 E-value=66 Score=30.88 Aligned_cols=21 Identities=10% Similarity=0.031 Sum_probs=16.1
Q ss_pred ceeeeeccChhhHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDN 33 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~ 33 (246)
+.++|.|+|.||..++..+.+
T Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 94 RPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CcEEEEecChHHHHHHHHHhC
Confidence 349999999999877665433
No 134
>PF07829 Toxin_14: Alpha-A conotoxin PIVA-like protein; InterPro: IPR012498 Alpha-A conotoxin PIVA (P55963 from SWISSPROT) is the major paralytic toxin found in the venom produced by the piscivorous snail Conus purpurascens. This peptide acts by blocking the acetylcholine-binding site of the nicotinic acetylcholine receptor at the neuromuscular junction []. The overall shape of the peptide is described as an "iron" with a highly charged hydrophilic loop of 15S-19R forming the "handle" domain that is exposed to the exterior of the protein. The stability of the conotoxin is primarily governed by three disulphide bonds. A triangular structural motif formed by residues 19R, 12H and 6Y is thought to constitute a "binding core" that is important in binding to the acetylcholine receptor []. ; GO: 0030550 acetylcholine receptor inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 1PQR_A 1P1P_A.
Probab=22.26 E-value=47 Score=19.29 Aligned_cols=10 Identities=50% Similarity=1.158 Sum_probs=6.0
Q ss_pred CCCCCCCCCCC
Q 025935 226 AYPCNPTCHNR 236 (246)
Q Consensus 226 ~yPcNptC~~~ 236 (246)
+|| |-.|+.-
T Consensus 5 ~yp-naachpc 14 (26)
T PF07829_consen 5 PYP-NAACHPC 14 (26)
T ss_dssp TSS-SSS--TT
T ss_pred CCC-Ccccccc
Confidence 899 7777753
No 135
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=22.25 E-value=85 Score=28.54 Aligned_cols=25 Identities=20% Similarity=0.211 Sum_probs=19.3
Q ss_pred ccceeeeeccChhhHHHHHHHHHHH
Q 025935 11 NAQNAVLSGCSAGGLTSILHCDNFR 35 (246)
Q Consensus 11 ~A~~viLsG~SAGGlg~~l~~D~~~ 35 (246)
+-+++-|+|+|+||-.++.-+-...
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhc
Confidence 3467999999999998886665543
No 136
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=22.14 E-value=83 Score=27.17 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=25.0
Q ss_pred hcccccce-eeeeccChhhHHHHHHHHHHHh
Q 025935 7 KGMKNAQN-AVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 7 ~Gl~~A~~-viLsG~SAGGlg~~l~~D~~~~ 36 (246)
+-+..++. ++|.++|-|.+.++.++..+..
T Consensus 52 ~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~~ 82 (181)
T COG3545 52 KEVNAAEGPVVLVAHSLGCATVAHWAEHIQR 82 (181)
T ss_pred HHHhccCCCeEEEEecccHHHHHHHHHhhhh
Confidence 44555666 9999999999999999988877
No 137
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=22.12 E-value=58 Score=30.88 Aligned_cols=24 Identities=25% Similarity=0.300 Sum_probs=19.8
Q ss_pred cceeeeeccChhhHHHHHHHHHHH
Q 025935 12 AQNAVLSGCSAGGLTSILHCDNFR 35 (246)
Q Consensus 12 A~~viLsG~SAGGlg~~l~~D~~~ 35 (246)
.+.|+|.|+|.||+=+....++..
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhcc
Confidence 689999999999988877666653
No 138
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=22.04 E-value=1.1e+02 Score=27.38 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=12.4
Q ss_pred ccceeeeeccChhh
Q 025935 11 NAQNAVLSGCSAGG 24 (246)
Q Consensus 11 ~A~~viLsG~SAGG 24 (246)
.-..++|.|+|.|+
T Consensus 82 ~~~~liLiGHSIGa 95 (266)
T PF10230_consen 82 PNVKLILIGHSIGA 95 (266)
T ss_pred CCCcEEEEeCcHHH
Confidence 66789999999988
No 139
>PF01339 CheB_methylest: CheB methylesterase; InterPro: IPR000673 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the signal transduction response regulator CheB involved in chemotaxis. CheB methylesterase is responsible for removing the methyl group from the gamma-glutamyl methyl ester residues in the methyl-accepting chemotaxis proteins (MCP). The enzyme catalyses the reaction: protein L-glutamate O-methyl ester and water is converted to protein L-glutamate and methanol. CheB is regulated through phosphorylation by CheA. The N-terminal region of the protein is similar to that of other regulatory components of sensory transduction systems. The Myxococcus xanthus FrzG protein also belongs to this family, and is required for the normal aggregation of cells during fruiting body formation.; GO: 0000156 two-component response regulator activity, 0008984 protein-glutamate methylesterase activity, 0000160 two-component signal transduction system (phosphorelay), 0006935 chemotaxis, 0005737 cytoplasm; PDB: 1CHD_A 1A2O_B 3SFT_A.
Probab=21.65 E-value=53 Score=27.86 Aligned_cols=14 Identities=43% Similarity=0.641 Sum_probs=10.3
Q ss_pred eeeeccChhhHHHH
Q 025935 15 AVLSGCSAGGLTSI 28 (246)
Q Consensus 15 viLsG~SAGGlg~~ 28 (246)
||.-|.||||+.++
T Consensus 1 vV~IGaSaGG~~al 14 (182)
T PF01339_consen 1 VVAIGASAGGPEAL 14 (182)
T ss_dssp EEEEEE-TTHHHHH
T ss_pred CEEEEeCCCCHHHH
Confidence 57789999998554
No 140
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=21.43 E-value=83 Score=28.63 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=15.4
Q ss_pred eeeeeccChhhHHHHHHHHHH
Q 025935 14 NAVLSGCSAGGLTSILHCDNF 34 (246)
Q Consensus 14 ~viLsG~SAGGlg~~l~~D~~ 34 (246)
.++|.|.|.||.=++..+-+.
T Consensus 139 ~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 139 LHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred ceEEEEECHHHHHHHHHHHHC
Confidence 457999999997666655443
No 141
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=21.24 E-value=1.8e+02 Score=27.54 Aligned_cols=48 Identities=23% Similarity=0.341 Sum_probs=37.4
Q ss_pred hhHHHhcccccceeeeeccChhhHHH----HHHHHHHHhhCCCCcEEEEeeccc
Q 025935 2 EDLMAKGMKNAQNAVLSGCSAGGLTS----ILHCDNFRALFPVGTKVKCFADAG 51 (246)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGlg~----~l~~D~~~~~Lp~~~~V~~l~DSG 51 (246)
|||.++|- +++.+++||+.=+|+.+ --..|.+.+.++++ .+..++|+.
T Consensus 58 deL~~~Ge-dveVA~VsG~~~~~v~ad~~I~~qld~vl~~~~~~-~~i~VsDGa 109 (344)
T PF04123_consen 58 DELKAEGE-DVEVAVVSGSPDVGVEADRKIAEQLDEVLSKFDPD-SAIVVSDGA 109 (344)
T ss_pred HHHHhcCC-CeEEEEEECCCCCchhhHHHHHHHHHHHHHhCCCC-EEEEEecCh
Confidence 68888886 99999999999988733 34567777777766 677788865
No 142
>PF13130 DUF3952: Domain of unknown function (DUF3952)
Probab=21.15 E-value=34 Score=26.85 Aligned_cols=37 Identities=30% Similarity=0.570 Sum_probs=24.3
Q ss_pred eeeeccChhhHHHHHHHHHHHhhCCCC--cEEEEeeccccc
Q 025935 15 AVLSGCSAGGLTSILHCDNFRALFPVG--TKVKCFADAGYF 53 (246)
Q Consensus 15 viLsG~SAGGlg~~l~~D~~~~~Lp~~--~~V~~l~DSGfF 53 (246)
.||+|||-|- +=+--.+|-..|.+. -+|.-.||-|+=
T Consensus 2 ~LlsgC~fge--tKIeYe~~VKALDEGDMktVMSASDdGYA 40 (107)
T PF13130_consen 2 SLLSGCGFGE--TKIEYERFVKALDEGDMKTVMSASDDGYA 40 (107)
T ss_pred ccccccccce--eeeehHHHHHHhcccchhheeccCCCcee
Confidence 5899999998 333334455556432 467788888863
No 143
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=21.02 E-value=77 Score=29.53 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=21.4
Q ss_pred hHHHh-cccccceeeeeccChhhHHHHHHHHHHHhh
Q 025935 3 DLMAK-GMKNAQNAVLSGCSAGGLTSILHCDNFRAL 37 (246)
Q Consensus 3 dLl~~-Gl~~A~~viLsG~SAGGlg~~l~~D~~~~~ 37 (246)
+|+.+ |++ +.++|.|.|.||.-++..+-...++
T Consensus 138 ~~l~~l~~~--~~~~lvG~S~Gg~ia~~~a~~~p~~ 171 (379)
T PRK00175 138 RLLDALGIT--RLAAVVGGSMGGMQALEWAIDYPDR 171 (379)
T ss_pred HHHHHhCCC--CceEEEEECHHHHHHHHHHHhChHh
Confidence 45544 443 2258999999998777766654333
No 144
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=20.75 E-value=72 Score=27.69 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=17.3
Q ss_pred ceeeeeccChhhHHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDNF 34 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~ 34 (246)
+.++|.|.|.||.-++.-+-+-
T Consensus 91 ~~~~LvG~S~GG~va~~~a~~~ 112 (276)
T TIGR02240 91 GQVNAIGVSWGGALAQQFAHDY 112 (276)
T ss_pred CceEEEEECHHHHHHHHHHHHC
Confidence 5689999999999777666443
No 145
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=20.61 E-value=66 Score=31.34 Aligned_cols=22 Identities=32% Similarity=0.367 Sum_probs=18.7
Q ss_pred cccceeeeeccChhhHHHHHHH
Q 025935 10 KNAQNAVLSGCSAGGLTSILHC 31 (246)
Q Consensus 10 ~~A~~viLsG~SAGGlg~~l~~ 31 (246)
++.+.|.|.|.||||..|-++.
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHh
Confidence 5788999999999999886554
No 146
>PF12070 DUF3550: Protein of unknown function (DUF3550/UPF0682); InterPro: IPR022709 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 249 to 606 amino acids in length.
Probab=20.58 E-value=55 Score=32.67 Aligned_cols=22 Identities=27% Similarity=0.547 Sum_probs=20.0
Q ss_pred CCcccchhhhhhccCcchhhhh
Q 025935 92 PGLCFFPQYMARQITTPLFIIN 113 (246)
Q Consensus 92 ~~~Cffpq~~~~~i~tP~Filn 113 (246)
.-.|.+|--++|+.+.|+|||-
T Consensus 365 ~~~~LyP~DL~PFTRkPLFlIV 386 (513)
T PF12070_consen 365 EMHCLYPGDLYPFTRKPLFLIV 386 (513)
T ss_pred CCcccchhhccccccCCeEEEE
Confidence 3599999999999999999985
No 147
>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function.
Probab=20.54 E-value=35 Score=28.28 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=12.2
Q ss_pred eeeccChhhHHHHHHH
Q 025935 16 VLSGCSAGGLTSILHC 31 (246)
Q Consensus 16 iLsG~SAGGlg~~l~~ 31 (246)
-+.|||||+-.-.+|+
T Consensus 25 NV~GSSAGAGSGeFHv 40 (142)
T PF06658_consen 25 NVQGSSAGAGSGEFHV 40 (142)
T ss_pred cccccccccCccHHHH
Confidence 4679999987666665
No 148
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=20.39 E-value=1.1e+02 Score=28.57 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=22.6
Q ss_pred hhHHHh--cccccceeeeeccChhhHHHHHHHHHHHh
Q 025935 2 EDLMAK--GMKNAQNAVLSGCSAGGLTSILHCDNFRA 36 (246)
Q Consensus 2 ~dLl~~--Gl~~A~~viLsG~SAGGlg~~l~~D~~~~ 36 (246)
++|..+ |..+.++|+|.|+|-|---++.+..+...
T Consensus 95 ~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 95 EYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp HHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred HHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 345554 44578899999999999999988887764
No 149
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=20.27 E-value=34 Score=25.91 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=26.0
Q ss_pred cccccceeeee---ccChhhHHHHHHHHHHHhhC-CCCcEEEEeec
Q 025935 8 GMKNAQNAVLS---GCSAGGLTSILHCDNFRALF-PVGTKVKCFAD 49 (246)
Q Consensus 8 Gl~~A~~viLs---G~SAGGlg~~l~~D~~~~~L-p~~~~V~~l~D 49 (246)
||.+.++.+-+ ..|++|.+. |.+.+++.| ++.++|.++|.
T Consensus 9 gl~~~qq~~~~~~~~~~~~~~~~--~~~~l~~~LG~QdV~V~Gip~ 52 (84)
T PF07643_consen 9 GLKRLQQFLESSNSRSSPAGPAA--WVDGLRQALGPQDVTVYGIPA 52 (84)
T ss_pred HHHHHHHHHHHHhccccccCHHH--HHHHHHHHhCCceeEEEccCC
Confidence 44444444332 234444444 889999999 57999999975
No 150
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.21 E-value=67 Score=28.94 Aligned_cols=17 Identities=29% Similarity=0.468 Sum_probs=13.7
Q ss_pred eeeeccChhhHHHHHHH
Q 025935 15 AVLSGCSAGGLTSILHC 31 (246)
Q Consensus 15 viLsG~SAGGlg~~l~~ 31 (246)
=+++|.||||+-+..-+
T Consensus 36 D~i~GTSaGaiia~~la 52 (288)
T cd07213 36 DLFAGTSAGSLIALGLA 52 (288)
T ss_pred eEEEEeCHHHHHHHHHH
Confidence 38899999999776654
No 151
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=20.19 E-value=71 Score=29.27 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=17.9
Q ss_pred ceeeeeccChhhHHHHHHHHHH
Q 025935 13 QNAVLSGCSAGGLTSILHCDNF 34 (246)
Q Consensus 13 ~~viLsG~SAGGlg~~l~~D~~ 34 (246)
.-++|.|+|.||+=++..+...
T Consensus 142 ~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred CceeEeeccCccHHHHHHHHHh
Confidence 3589999999999888777654
Done!