Your job contains 1 sequence.
>025938
MDGREAMVASGGVSGPYYIQQHRGAFSGSHSATQSGLMQTPPGFRSSSNLNIPTQPNVGS
TFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQVSLGLSPLPARPKRSPAS
DSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQR
PRVVCILSGRGTVSSVTLRQPATSVPTVTYEVEALCLYLFLFWKKKIHQKNFHFCTLPFL
CLLLVP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025938
(246 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031321 - symbol:AT1G63470 species:3702 "Arabi... 488 1.6e-57 2
TAIR|locus:2031306 - symbol:AT1G63480 species:3702 "Arabi... 468 1.9e-44 1
TAIR|locus:2050766 - symbol:AT2G45850 species:3702 "Arabi... 406 7.0e-38 1
TAIR|locus:2098861 - symbol:AT3G61310 species:3702 "Arabi... 371 3.6e-34 1
TAIR|locus:2051038 - symbol:AT2G33620 species:3702 "Arabi... 318 1.5e-28 1
TAIR|locus:2118091 - symbol:AHL1 "AT-hook motif nuclear-l... 296 3.2e-26 1
TAIR|locus:2178505 - symbol:AT5G46640 species:3702 "Arabi... 280 1.6e-24 1
TAIR|locus:2141045 - symbol:AT4G17950 species:3702 "Arabi... 220 2.9e-24 2
TAIR|locus:2132599 - symbol:AT4G22770 species:3702 "Arabi... 277 3.3e-24 1
TAIR|locus:2122684 - symbol:AHL3 "AT-HOOK MOTIF NUCLEAR L... 273 8.7e-24 1
TAIR|locus:2153142 - symbol:AHL4 "AT-HOOK MOTIF NUCLEAR L... 167 3.3e-22 2
TAIR|locus:2084983 - symbol:AT3G04590 species:3702 "Arabi... 228 1.5e-18 1
TAIR|locus:2126946 - symbol:AT4G00200 species:3702 "Arabi... 221 2.8e-18 1
TAIR|locus:2167988 - symbol:AT5G62260 species:3702 "Arabi... 209 1.9e-16 1
TAIR|locus:2084958 - symbol:AHL19 "AT-hook motif nuclear-... 150 5.6e-11 2
TAIR|locus:2011701 - symbol:SOB3 "SUPPRESSOR OF PHYB-4#3"... 159 8.1e-10 1
TAIR|locus:2037350 - symbol:ESC "ESCAROLA" species:3702 "... 158 1.2e-09 1
TAIR|locus:2099956 - symbol:AGF2 "AT-hook protein of GA f... 152 6.9e-09 1
TAIR|locus:2118051 - symbol:AT4G12050 "AT4G12050" species... 150 1.6e-08 1
TAIR|locus:2132639 - symbol:AT4G22810 "AT4G22810" species... 147 3.3e-08 1
TAIR|locus:505006460 - symbol:AHL20 "AT4G14465" species:3... 142 9.3e-08 1
TAIR|locus:2050946 - symbol:AHL22 "AT2G45430" species:370... 143 9.9e-08 1
TAIR|locus:2101916 - symbol:AHL18 "AT3G60870" species:370... 140 1.4e-07 1
TAIR|locus:2157007 - symbol:AT5G49700 species:3702 "Arabi... 137 3.6e-07 1
TAIR|locus:2045585 - symbol:TEK "AT2G42940" species:3702 ... 135 5.1e-07 1
TAIR|locus:2063469 - symbol:GIK "GIANT KILLER" species:37... 136 5.2e-07 1
TAIR|locus:2129490 - symbol:AT4G17800 species:3702 "Arabi... 133 1.3e-06 1
TAIR|locus:2122148 - symbol:AGF1 "AT4G35390" species:3702... 130 3.1e-06 1
TAIR|locus:2012537 - symbol:AT1G14490 "AT1G14490" species... 117 3.6e-05 1
TAIR|locus:2179053 - symbol:AT5G28590 "AT5G28590" species... 113 0.00013 1
>TAIR|locus:2031321 [details] [associations]
symbol:AT1G63470 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0000226 "microtubule cytoskeleton organization" evidence=RCA]
[GO:0000280 "nuclear division" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007000 "nucleolus organization" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0031048 "chromatin silencing by small
RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684 GO:GO:0003677
InterPro:IPR005175 Pfam:PF03479 eggNOG:NOG246569 EMBL:BT005545
EMBL:AK118329 EMBL:BR000341 IPI:IPI00536298 RefSeq:NP_176536.2
UniGene:At.36125 UniGene:At.73033 ProteinModelPortal:Q8GXB3
IntAct:Q8GXB3 STRING:Q8GXB3 PaxDb:Q8GXB3 PRIDE:Q8GXB3
EnsemblPlants:AT1G63470.1 GeneID:842653 KEGG:ath:AT1G63470
TAIR:At1g63470 InParanoid:Q8GXB3 OMA:EPTNSEM PhylomeDB:Q8GXB3
ProtClustDB:CLSN2690476 ArrayExpress:Q8GXB3 Genevestigator:Q8GXB3
Uniprot:Q8GXB3
Length = 378
Score = 488 (176.8 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 95/135 (70%), Positives = 113/135 (83%)
Query: 82 PLSDP-VKKKRGRPRKYAPDGQVSLGLSPLPARPKRSP----ASDSQALKRSRGRPPGTG 136
P P VKKKRGRPRKY PDGQVSLGLSP+P K+S SD A KR+RGRPPGTG
Sbjct: 98 PSEQPMVKKKRGRPRKYVPDGQVSLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTG 157
Query: 137 RKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSV 196
RKQ+LA LGEWMN+SAG+AFAPHVIS+G GEDIV+K+LSFSQ+RPR +CI+SG GTVSSV
Sbjct: 158 RKQRLANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSV 217
Query: 197 TLRQPATSVPTVTYE 211
TLR+PA++ P++T+E
Sbjct: 218 TLREPASTTPSLTFE 232
Score = 121 (47.7 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGAFSG-SHSATQSGLMQTPP--GFRSSSNLNI--PTQ 55
MDGREAM G S +Y+Q RG F+ + S SGL PP G R SN NI P
Sbjct: 1 MDGREAMAFPGSHS-QFYLQ--RGVFTNLTPSQVASGLHAPPPPPGMRPMSNPNIHHPQA 57
Query: 56 PNVGSTFAV-EPKHVNFGHNMSVPSGVP 82
N G F++ E +H +FGH++ + P
Sbjct: 58 SNPGPPFSMAEHRHSDFGHSIHMGMASP 85
>TAIR|locus:2031306 [details] [associations]
symbol:AT1G63480 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506
eggNOG:NOG246569 ProtClustDB:CLSN2690476 EMBL:AY096576
EMBL:BR000348 IPI:IPI00529016 RefSeq:NP_176537.2 UniGene:At.28375
ProteinModelPortal:Q8LPN5 IntAct:Q8LPN5 EnsemblPlants:AT1G63480.1
GeneID:842654 KEGG:ath:AT1G63480 TAIR:At1g63480 InParanoid:Q8LPN5
OMA:GARAKTH PhylomeDB:Q8LPN5 Genevestigator:Q8LPN5 Uniprot:Q8LPN5
Length = 361
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 118/227 (51%), Positives = 141/227 (62%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGAFSG-SHSATQSGLMQTPP--GFRSSSNLNI--PTQ 55
MDGREAM G S YY+Q RGAF+ + S SGL PP G R SN NI P
Sbjct: 1 MDGREAMAFPGSHS-QYYLQ--RGAFTNLAPSQVASGLHAPPPHTGLRPMSNPNIHHPQA 57
Query: 56 PNVGSTFAVEPKHVNFGHNMSV--------PSGVPLSDP-VKKKRGRPRKYAPDGQVSLG 106
N G F+ ++ G S P P +P VK+KRGRPRKY G+
Sbjct: 58 NNPGPPFSDFGHTIHMGVVSSASDADVQPPPPPPPPEEPMVKRKRGRPRKY---GE---- 110
Query: 107 LSPLPARPKR--SPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIG 164
P+ + R SP SD KR+RGRPPGTGRKQ+LA LGEWMN+SAG+AFAPHVISIG
Sbjct: 111 --PMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAGLAFAPHVISIG 168
Query: 165 VGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 211
GEDI AK+LSFSQQRPR +CI+SG GT+SSVTL +P ++ +TYE
Sbjct: 169 AGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYE 215
>TAIR|locus:2050766 [details] [associations]
symbol:AT2G45850 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 EMBL:AC004665
InterPro:IPR005175 Pfam:PF03479 UniGene:At.12707 UniGene:At.48596
HOGENOM:HOG000116506 EMBL:AF367271 EMBL:AY059157 EMBL:AY062699
EMBL:AY114678 EMBL:BR000345 IPI:IPI00548851 PIR:T02462
RefSeq:NP_182109.1 RefSeq:NP_850442.1 ProteinModelPortal:O80834
SMR:O80834 IntAct:O80834 PaxDb:O80834 PRIDE:O80834
EnsemblPlants:AT2G45850.1 EnsemblPlants:AT2G45850.2 GeneID:819193
KEGG:ath:AT2G45850 TAIR:At2g45850 eggNOG:NOG246569
InParanoid:O80834 OMA:TITPNNS PhylomeDB:O80834
ProtClustDB:CLSN2683445 ArrayExpress:O80834 Genevestigator:O80834
Uniprot:O80834
Length = 348
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 102/228 (44%), Positives = 133/228 (58%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGAFSGSHSATQSGLMQTPPGFRSSSNLNIPT------ 54
MD R+AM SG SG YYI HRG SGS T G Q G R N N P
Sbjct: 1 MDRRDAMGLSG--SGSYYI--HRG-LSGSGPPTFHGSPQQQQGLRHLPNQNSPFGSGSTG 55
Query: 55 --QPNV-G----STFA----VEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQV 103
P++ G +T A P H+ G NM P P P+K+KRGRPRKY DG V
Sbjct: 56 FGSPSLHGDPSLATAAGGAGALPHHI--GVNMIAPPPPPSETPMKRKRGRPRKYGQDGSV 113
Query: 104 SLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISI 163
SL LS S + + + KR RGRPPG+G+KQ++A++GE M SS+G++F PHVI++
Sbjct: 114 SLALSSSSV----STITPNNSNKRGRGRPPGSGKKQRMASVGELMPSSSGMSFTPHVIAV 169
Query: 164 GVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 211
+GEDI +K+++FSQQ PR +C+LS G VS+ TL QP+ S + YE
Sbjct: 170 SIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAIKYE 217
>TAIR|locus:2098861 [details] [associations]
symbol:AT3G61310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 InterPro:IPR005175
Pfam:PF03479 HOGENOM:HOG000116506 ProtClustDB:CLSN2683445
EMBL:AY128386 EMBL:BT008837 EMBL:BR000347 IPI:IPI00541455
RefSeq:NP_191690.2 UniGene:At.48793 UniGene:At.65801
UniGene:At.71203 ProteinModelPortal:Q8L7L5 IntAct:Q8L7L5
PaxDb:Q8L7L5 PRIDE:Q8L7L5 EnsemblPlants:AT3G61310.1 GeneID:825303
KEGG:ath:AT3G61310 TAIR:At3g61310 eggNOG:NOG291819
InParanoid:Q8L7L5 OMA:SSIGEMM PhylomeDB:Q8L7L5 ArrayExpress:Q8L7L5
Genevestigator:Q8L7L5 Uniprot:Q8L7L5
Length = 354
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 101/229 (44%), Positives = 129/229 (56%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGA-FSGSHSATQSGLMQTPPGFRSSSNLNIP------ 53
MD R+AM SG SG YYIQ RG SG GF +N P
Sbjct: 1 MDRRDAMALSG--SGSYYIQ--RGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPN 56
Query: 54 TQPNVG--ST-FAVEPKHVNFG--HNMSVPSGVPLSDP-----VKKKRGRPRKYAPDG-Q 102
PN G ST F P V+ + + +G ++ P VK+KRGRPRKY DG
Sbjct: 57 PNPNPGGVSTGFVSPPLPVDSSPADSSAAAAGALVAPPSGDTSVKRKRGRPRKYGQDGGS 116
Query: 103 VSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVIS 162
VSL LSP + SP S+ KR RGRPPG+G+KQ+L+++GE M SS G++F PHVI
Sbjct: 117 VSLALSPSISNV--SPNSN----KRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIV 170
Query: 163 IGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 211
+ +GEDI +K++SFS Q PR +C+LS G VS+ TL QPA S T+ YE
Sbjct: 171 VSIGEDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYE 219
>TAIR|locus:2051038 [details] [associations]
symbol:AT2G33620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0048438 "floral whorl development" evidence=RCA]
[GO:0048439 "flower morphogenesis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 EMBL:AC002332 InterPro:IPR005175 Pfam:PF03479
EMBL:AY081729 EMBL:BR000346 IPI:IPI00516597 PIR:G84747
RefSeq:NP_001118437.1 RefSeq:NP_565769.1 RefSeq:NP_850215.1
RefSeq:NP_973590.1 UniGene:At.48546 UniGene:At.49689
UniGene:At.64420 ProteinModelPortal:O22812 SMR:O22812 STRING:O22812
PaxDb:O22812 PRIDE:O22812 EnsemblPlants:AT2G33620.1
EnsemblPlants:AT2G33620.2 EnsemblPlants:AT2G33620.3
EnsemblPlants:AT2G33620.4 GeneID:817928 KEGG:ath:AT2G33620
TAIR:At2g33620 eggNOG:NOG315719 HOGENOM:HOG000116506
InParanoid:O22812 OMA:SENGGHR PhylomeDB:O22812
ProtClustDB:CLSN2688664 ArrayExpress:O22812 Genevestigator:O22812
Uniprot:O22812
Length = 351
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 86/226 (38%), Positives = 121/226 (53%)
Query: 1 MDGREA-MVASGGVSGPYYIQQHRGAFSGSHSATQSGLMQTPP-GFRSSSNLNIPTQP-- 56
M G E ++A+ S + + H+ HS Q Q P F + QP
Sbjct: 1 MSGSETGLMAATRESMQFTMALHQ---QQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMR 57
Query: 57 NVGSTFAVEPKHV--NFGHNMSVPSGVPL------SDPVKKKRGRPRKYAPD-GQVSLGL 107
+V +P N NM++P G S+PVKK+RGRPRKY PD G++SLGL
Sbjct: 58 SVSPPQQYQPNSAGENSVLNMNLPGGESGGMTGTGSEPVKKRRGRPRKYGPDSGEMSLGL 117
Query: 108 SP-LPARPKRSPASDSQALKRSRGRPPGTGRKQ-QLATLGEWMNSSAGIAFAPHVISIGV 165
+P P+ P+S ++ RGRPPG+ K+ +L LG S GI F PHV+++
Sbjct: 118 NPGAPSFTVSQPSSGGDGGEKKRGRPPGSSSKRLKLQALG-----STGIGFTPHVLTVLA 172
Query: 166 GEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 211
GED+ +K+++ + PR VC+LS G +S+VTLRQ ATS TVTYE
Sbjct: 173 GEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYE 218
>TAIR|locus:2118091 [details] [associations]
symbol:AHL1 "AT-hook motif nuclear-localized protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 GO:GO:0005739 EMBL:CP002687
GO:GO:0005730 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
HOGENOM:HOG000116506 ProtClustDB:CLSN2685830 EMBL:AY070738
EMBL:AY149932 EMBL:AB284367 IPI:IPI00521294 RefSeq:NP_192945.2
UniGene:At.28340 ProteinModelPortal:Q8VYJ2 SMR:Q8VYJ2 IntAct:Q8VYJ2
PaxDb:Q8VYJ2 PRIDE:Q8VYJ2 EnsemblPlants:AT4G12080.1 GeneID:826816
KEGG:ath:AT4G12080 TAIR:At4g12080 eggNOG:NOG314683
InParanoid:Q8VYJ2 OMA:ADHRTIH PhylomeDB:Q8VYJ2
Genevestigator:Q8VYJ2 Uniprot:Q8VYJ2
Length = 356
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 76/197 (38%), Positives = 102/197 (51%)
Query: 29 SHSATQSGLMQTPPGFRSSSNLNIPTQPNVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVK 88
S S+ QS TPP + SS+ P + + G + G+ +K
Sbjct: 39 SESSNQSPTSVTPPPPQPSSHHTAPPPLQISTVTTTTTTAAMEG----ISGGL-----MK 89
Query: 89 KKRGRPRKYAPDGQVSLGLSPLPAR----PKRSPASDSQAL------KRSRGRPPGTGRK 138
KKRGRPRKY PDG V + LSP P P P S + KRS+ +P + +
Sbjct: 90 KKRGRPRKYGPDGTV-VALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNR 148
Query: 139 ----QQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVS 194
Q+ LGEW S G F PH+I++ GED+ K++SFSQQ PR +C+LS G +S
Sbjct: 149 TKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVIS 208
Query: 195 SVTLRQPATSVPTVTYE 211
SVTLRQP +S T+TYE
Sbjct: 209 SVTLRQPDSSGGTLTYE 225
>TAIR|locus:2178505 [details] [associations]
symbol:AT5G46640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR017956 Pfam:PF02178 SMART:SM00384
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 EMBL:AB016882
InterPro:IPR005175 Pfam:PF03479 eggNOG:NOG315719
HOGENOM:HOG000116506 ProtClustDB:CLSN2686193 EMBL:BT015318
EMBL:BT015755 EMBL:AB493779 EMBL:BR000344 IPI:IPI00530307
RefSeq:NP_199476.1 UniGene:At.29940 ProteinModelPortal:Q9FIR1
SMR:Q9FIR1 PaxDb:Q9FIR1 PRIDE:Q9FIR1 EnsemblPlants:AT5G46640.1
GeneID:834707 KEGG:ath:AT5G46640 TAIR:At5g46640 InParanoid:Q9FIR1
OMA:DIASKVM PhylomeDB:Q9FIR1 Genevestigator:Q9FIR1 Uniprot:Q9FIR1
Length = 386
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 67/142 (47%), Positives = 85/142 (59%)
Query: 87 VKKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQA-----------------LKRSR 129
VKKKRGRPRKY PDG ++LGL+P P S AS+S +KR+R
Sbjct: 101 VKKKRGRPRKYTPDGSIALGLAP--TSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNR 158
Query: 130 GRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSG 189
GRPPG+ +KQ L LG ++G+ F PHVI + GEDI +K+++FS Q R +CILS
Sbjct: 159 GRPPGSSKKQ-LDALG----GTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSA 213
Query: 190 RGTVSSVTLRQPATSVPTVTYE 211
G VS V LRQ + S VTYE
Sbjct: 214 SGAVSRVMLRQASHSSGIVTYE 235
>TAIR|locus:2141045 [details] [associations]
symbol:AT4G17950 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017956 Pfam:PF02178 SMART:SM00384 GO:GO:0005829
EMBL:CP002687 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
EMBL:AY054610 EMBL:AY081495 EMBL:BR000349 IPI:IPI00547973
RefSeq:NP_567546.1 UniGene:At.119 ProteinModelPortal:Q940I0
SMR:Q940I0 IntAct:Q940I0 PRIDE:Q940I0 EnsemblPlants:AT4G17950.1
GeneID:827520 KEGG:ath:AT4G17950 TAIR:At4g17950 InParanoid:Q940I0
OMA:MGHNTST PhylomeDB:Q940I0 ProtClustDB:CLSN2686193
Genevestigator:Q940I0 Uniprot:Q940I0
Length = 439
Score = 220 (82.5 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 48/95 (50%), Positives = 62/95 (65%)
Query: 119 ASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQ 178
+SD A KR+RGRPPG+G+KQ L LG + G+ F PHVI + GEDI K+L+F+
Sbjct: 190 SSDPPA-KRNRGRPPGSGKKQ-LDALG----GTGGVGFTPHVIEVKTGEDIATKILAFTN 243
Query: 179 QRPRVVCILSGRGTVSSVTLRQPATSVPTVTYEVE 213
Q PR +CILS G V++V LRQ S PT T + E
Sbjct: 244 QGPRAICILSATGAVTNVMLRQANNSNPTGTVKYE 278
Score = 84 (34.6 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 37/120 (30%), Positives = 48/120 (40%)
Query: 6 AMVASGGVSGPYYIQQHRGAFSGSHSATQSGLMQTPPGFRSSSNLNIPTQPNVGSTFAVE 65
A V G + R F GS S Q Q + ++ T ++G F
Sbjct: 53 AAVLMGHNTSTSQAMHQRLPFGGSMSPHQPQQHQYHHP-QPQQQIDQKTLESLG--FDGS 109
Query: 66 PKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDG--------QVSLGLSPLPARPKRS 117
P V S+ G+ VKKKRGRPRKYA DG ++LGL+P P S
Sbjct: 110 PSSVAATQQHSMRFGID-HQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSAS 168
Score = 50 (22.7 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 29/109 (26%), Positives = 45/109 (41%)
Query: 39 QTPPGFRSSSNLNIPTQPNVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKY- 97
Q PPG S + + PN + AV H N + ++ +P + + + +Y
Sbjct: 32 QPPPGMLMSHHNSYNRNPNAAA--AVLMGH-NTSTSQAMHQRLPFGGSMSPHQPQQHQYH 88
Query: 98 --APDGQV------SLGL--SP--LPARPKRSP--ASDSQALKRSRGRP 132
P Q+ SLG SP + A + S D Q +K+ RGRP
Sbjct: 89 HPQPQQQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKKRGRP 137
>TAIR|locus:2132599 [details] [associations]
symbol:AT4G22770 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR017956 SMART:SM00384 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161558 EMBL:AL021635
InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506 EMBL:AY084893
EMBL:BT026450 EMBL:AB493692 EMBL:BR000338 IPI:IPI00530161
PIR:T04572 RefSeq:NP_194008.1 UniGene:At.32499 UniGene:At.70599
ProteinModelPortal:O49658 SMR:O49658 PRIDE:O49658
EnsemblPlants:AT4G22770.1 GeneID:828376 KEGG:ath:AT4G22770
TAIR:At4g22770 eggNOG:NOG255062 InParanoid:O49658 OMA:ADHRTIR
PhylomeDB:O49658 ProtClustDB:CLSN2685830 ArrayExpress:O49658
Genevestigator:O49658 Uniprot:O49658
Length = 334
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 63/139 (45%), Positives = 80/139 (57%)
Query: 84 SDPVKKKRGRPRKYAPDGQVSLGLSPLP---ARPKRSPASDSQALKRSRGR-PPGTGR-- 137
S P+KK+RGRPRKY DG ++ LSP P A P S D RG+ P T
Sbjct: 68 SGPIKKRRGRPRKYGHDG-AAVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPS 126
Query: 138 -----KQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGT 192
K Q+ LGEW SSA F PH+I++ GED+ +++SFSQQ +C+L G
Sbjct: 127 SFIRPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGV 186
Query: 193 VSSVTLRQPATSVPTVTYE 211
VSSVTLRQP +S T+TYE
Sbjct: 187 VSSVTLRQPDSSGGTLTYE 205
>TAIR|locus:2122684 [details] [associations]
symbol:AHL3 "AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010089 "xylem development" evidence=IMP] InterPro:IPR017956
SMART:SM00384 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161563 InterPro:IPR005175 Pfam:PF03479 EMBL:AL035396
HOGENOM:HOG000116506 ProtClustDB:CLSN2685677 EMBL:AY099572
EMBL:BT003408 EMBL:BR000339 IPI:IPI00535403 PIR:T05553
RefSeq:NP_194262.1 UniGene:At.2582 ProteinModelPortal:Q9SB31
SMR:Q9SB31 IntAct:Q9SB31 PaxDb:Q9SB31 PRIDE:Q9SB31
EnsemblPlants:AT4G25320.1 GeneID:828635 KEGG:ath:AT4G25320
TAIR:At4g25320 eggNOG:NOG313609 InParanoid:Q9SB31 OMA:TSEFPPR
PhylomeDB:Q9SB31 Genevestigator:Q9SB31 Uniprot:Q9SB31
Length = 404
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 75/227 (33%), Positives = 112/227 (49%)
Query: 1 MDGREAMVASGGVSGPYYI-QQHRGAFS-GSHSATQSGLMQTPPGFRSSSNLNIP--TQP 56
M+ RE + ++ + + QQH A S G +S M PP + + +P T P
Sbjct: 1 MEEREGTNINNNITSSFGLKQQHEAAASDGGYS------MDPPPRPENPNPFLVPPTTVP 54
Query: 57 NVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQVSLGLSPLPARPKR 116
+ A ++ ++++P+ ++ +KKKRGRPRKY PDG + + LSP+P
Sbjct: 55 AAATVAAAVTENAATPFSLTMPTENTSAEQLKKKRGRPRKYNPDGTLVVTLSPMPISSSV 114
Query: 117 SPASDSQALKRSRGRPPGTG--RKQQLATL----------GEWMNSSAGIAFAPHVISIG 164
S+ KR RGR +K Q+ G G F PHV+ +
Sbjct: 115 PLTSEFPPRKRGRGRGKSNRWLKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVN 174
Query: 165 VGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 211
GED+ K+++FSQQ R +CILS G +S+VTLRQ TS T+TYE
Sbjct: 175 AGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYE 221
>TAIR|locus:2153142 [details] [associations]
symbol:AHL4 "AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 4"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010089 "xylem
development" evidence=IMP] InterPro:IPR017956 SMART:SM00384
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 EMBL:AB018109
InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506 EMBL:AB493788
EMBL:BR000340 IPI:IPI00523440 RefSeq:NP_199972.1 UniGene:At.46739
ProteinModelPortal:Q9FHM5 SMR:Q9FHM5 PaxDb:Q9FHM5 PRIDE:Q9FHM5
EnsemblPlants:AT5G51590.1 GeneID:835233 KEGG:ath:AT5G51590
TAIR:At5g51590 eggNOG:NOG322801 InParanoid:Q9FHM5 OMA:HEPSTNT
PhylomeDB:Q9FHM5 ProtClustDB:CLSN2685677 Genevestigator:Q9FHM5
Uniprot:Q9FHM5
Length = 419
Score = 167 (63.8 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 155 AFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 211
+F PHV+++ GED+ K+++FSQQ R +CILS G +S+VTLRQ TS T+TYE
Sbjct: 177 SFTPHVLTVNAGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYE 233
Score = 144 (55.7 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 42/102 (41%), Positives = 54/102 (52%)
Query: 41 PPGFRS-SSNLNI-PT-QPNVGSTFA-VEPKHVNFGHNMSVPSGVP-LSDPVKKKRGRPR 95
PPG+ S N N+ P Q + S A V+P N S+ V S +KKKRGRPR
Sbjct: 27 PPGYPPRSENPNLFPVGQSSTSSAAAAVKPSE-NVAPPFSLTMPVENSSSELKKKRGRPR 85
Query: 96 KYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGR 137
KY PDG +++ LSP+P S+ + KR RGR G GR
Sbjct: 86 KYNPDGSLAVTLSPMPISSSVPLTSEFGSRKRGRGRGRGRGR 127
>TAIR|locus:2084983 [details] [associations]
symbol:AT3G04590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017956 Pfam:PF02178 SMART:SM00384
EMBL:CP002686 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
EMBL:BT029764 EMBL:AB493600 IPI:IPI00529282 RefSeq:NP_187109.2
UniGene:At.19818 ProteinModelPortal:A1L4X7 SMR:A1L4X7 PRIDE:A1L4X7
EnsemblPlants:AT3G04590.2 GeneID:819615 KEGG:ath:AT3G04590
TAIR:At3g04590 OMA:GHESSEN PhylomeDB:A1L4X7 Genevestigator:Q3E6V9
Uniprot:A1L4X7
Length = 411
Score = 228 (85.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 62/164 (37%), Positives = 87/164 (53%)
Query: 55 QPNVGST-FAVEPKHVNFGHNMSVPSGVPLS--DPVKKKRGRPRKYAPDGQVSLGLSPLP 111
QPN GS+ AV P H SVPS + +PVK+KRGRPRKY Q +L L
Sbjct: 77 QPNDGSSSLAVYP-H-------SVPSSAVTAPMEPVKRKRGRPRKYVTPEQ-ALAAKKLA 127
Query: 112 ARPKRSPASDSQALKRSRGRP----PGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGE 167
+ S A + L G G+ +K QL ++G+ G F PH+++I GE
Sbjct: 128 SSASSSSAKQRRELAAVTGGTVSTNSGSSKKSQLGSVGK-----TGQCFTPHIVNIAPGE 182
Query: 168 DIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 211
D+V K++ F+ Q +C+LS GT+S+ +LRQPA S + YE
Sbjct: 183 DVVQKIMMFANQSKHELCVLSASGTISNASLRQPAPSGGNLPYE 226
>TAIR|locus:2126946 [details] [associations]
symbol:AT4G00200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 InterPro:IPR005175
Pfam:PF03479 HOGENOM:HOG000116506 EMBL:BT023416 EMBL:AK228631
IPI:IPI00518846 RefSeq:NP_191931.2 UniGene:At.34588
ProteinModelPortal:Q4V3E0 SMR:Q4V3E0 PRIDE:Q4V3E0
EnsemblPlants:AT4G00200.1 GeneID:828162 KEGG:ath:AT4G00200
TAIR:At4g00200 OMA:SATDINI PhylomeDB:Q4V3E0 ProtClustDB:CLSN2920282
Genevestigator:Q4V3E0 Uniprot:Q4V3E0
Length = 318
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 50/124 (40%), Positives = 69/124 (55%)
Query: 88 KKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEW 147
KK+RGRPRKY +G L S +P KR + + + G + +G
Sbjct: 56 KKRRGRPRKYEANG-APLPSSSVPLVKKRVRGKLNGFDMKKMHKTIGFHSSGERFGVGGG 114
Query: 148 MNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPT 207
+ G F PHVI++ GEDI +++SFSQQ PR +CILS G +S+VTLRQP + T
Sbjct: 115 VGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQPDSCGGT 174
Query: 208 VTYE 211
+TYE
Sbjct: 175 LTYE 178
>TAIR|locus:2167988 [details] [associations]
symbol:AT5G62260 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR017956 Pfam:PF02178
SMART:SM00384 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB019235 InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506
EMBL:BT005681 EMBL:AK118328 EMBL:BR000342 IPI:IPI00545024
RefSeq:NP_201032.2 UniGene:At.29059 ProteinModelPortal:Q9LVB0
SMR:Q9LVB0 IntAct:Q9LVB0 PRIDE:Q9LVB0 EnsemblPlants:AT5G62260.1
GeneID:836347 KEGG:ath:AT5G62260 TAIR:At5g62260 eggNOG:NOG283759
InParanoid:Q9LVB0 PhylomeDB:Q9LVB0 ProtClustDB:CLSN2918888
ArrayExpress:Q9LVB0 Genevestigator:Q9LVB0 Uniprot:Q9LVB0
Length = 404
Score = 209 (78.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/185 (34%), Positives = 88/185 (47%)
Query: 44 FRSSSNLNIPTQPNVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQV 103
F S + + P P + A P V G + + +G SDP KKKRGRPRKYAPDG +
Sbjct: 36 FVSPTTVVTPLPPPPAPSSAPVPTTVTPG-SATASTG---SDPTKKKRGRPRKYAPDGSL 91
Query: 104 SLG-----LSPLPARPKRSPASDSQALKRSRGR----PPGTGRKQQLATLGE-------- 146
+ LSP P P S KR + + P +K G
Sbjct: 92 NPRFLRPTLSPTPISSS-IPLSGDYQWKRGKAQQQHQPLEFVKKSHKFEYGSPAPTPPLP 150
Query: 147 WMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVP 206
++ G F H ++ GED+ K++ +SQQ R +CILS G++S+VTL QP +
Sbjct: 151 GLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAICILSATGSISNVTLGQPTNAGG 210
Query: 207 TVTYE 211
T+TYE
Sbjct: 211 TLTYE 215
>TAIR|locus:2084958 [details] [associations]
symbol:AHL19 "AT-hook motif nuclear-localized protein 19"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0000041 "transition metal ion transport"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0050832
GO:GO:0003677 EMBL:AC011437 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 UniGene:At.40820
eggNOG:NOG328801 EMBL:AY085572 EMBL:BT005882 EMBL:AK228206
EMBL:BR000355 IPI:IPI00516612 RefSeq:NP_566232.1
ProteinModelPortal:Q9SR17 STRING:Q9SR17 PaxDb:Q9SR17 PRIDE:Q9SR17
EnsemblPlants:AT3G04570.1 GeneID:819613 KEGG:ath:AT3G04570
TAIR:At3g04570 InParanoid:Q9SR17 OMA:PNALKSH PhylomeDB:Q9SR17
ProtClustDB:CLSN2917091 Genevestigator:Q9SR17 Uniprot:Q9SR17
Length = 315
Score = 150 (57.9 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 126 KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVC 185
+R RGRP G+ K + ++ + A HV+ I G D++ + +F+++R R +C
Sbjct: 80 RRPRGRPAGSKNKPKPPI---FVTRDSPNALKSHVMEIASGTDVIETLATFARRRQRGIC 136
Query: 186 ILSGRGTVSSVTLRQPATS 204
ILSG GTV++VTLRQP+T+
Sbjct: 137 ILSGNGTVANVTLRQPSTA 155
Score = 55 (24.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 35 SGLMQTPPGFRSSSNLNIPTQPNVGSTFAVEPKHVNFGHNMSV 77
SGL TPPG SS L P ++ A++ H N H+ V
Sbjct: 13 SGLETTPPG---SSQLKKPDL-HISMNMAMDSGHNNHHHHQEV 51
>TAIR|locus:2011701 [details] [associations]
symbol:SOB3 "SUPPRESSOR OF PHYB-4#3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0009640 "photomorphogenesis" evidence=RCA;IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0009933
"meristem structural organization" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 GO:GO:0009640 EMBL:AC015450
HOGENOM:HOG000239043 ProtClustDB:CLSN2679445 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BR000365
IPI:IPI00530632 PIR:H96792 RefSeq:NP_177776.1 UniGene:At.7934
ProteinModelPortal:Q9C9K7 SMR:Q9C9K7 STRING:Q9C9K7 PRIDE:Q9C9K7
EnsemblPlants:AT1G76500.1 GeneID:843983 KEGG:ath:AT1G76500
TAIR:At1g76500 eggNOG:NOG321476 InParanoid:Q9C9K7 OMA:HGANGGT
PhylomeDB:Q9C9K7 Genevestigator:Q9C9K7 Uniprot:Q9C9K7
Length = 302
Score = 159 (61.0 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 73 HNMSVPSGVPLSDPVKKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRP 132
H+ P P P+ + + +P+ P Q S S P P + KR RGRP
Sbjct: 24 HHQLQPQ--PQLHPLPQPQPQPQ---PQQQNSDDESDSNKDPGSDPVTSGSTGKRPRGRP 78
Query: 133 PGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGT 192
PG+ K + + + + HV+ + G DIV + +++++R R V ILSG GT
Sbjct: 79 PGSKNKPKPPVI---VTRDSPNVLRSHVLEVSSGADIVESVTTYARRRGRGVSILSGNGT 135
Query: 193 VSSVTLRQPATS 204
V++V+LRQPAT+
Sbjct: 136 VANVSLRQPATT 147
>TAIR|locus:2037350 [details] [associations]
symbol:ESC "ESCAROLA" species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0003690 "double-stranded
DNA binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006325 "chromatin organization" evidence=IMP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0003680 "AT DNA binding" evidence=IDA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0010150 GO:GO:0009640
GO:GO:0003690 GO:GO:0006325 EMBL:AC007369 GO:GO:0003680
EMBL:AF194974 EMBL:BT006460 IPI:IPI00529897 PIR:F86341
RefSeq:NP_173514.1 UniGene:At.11202 UniGene:At.75184
ProteinModelPortal:Q9S7C9 SMR:Q9S7C9 STRING:Q9S7C9 PaxDb:Q9S7C9
PRIDE:Q9S7C9 EnsemblPlants:AT1G20900.1 GeneID:838683
KEGG:ath:AT1G20900 TAIR:At1g20900 eggNOG:NOG303772
HOGENOM:HOG000239043 InParanoid:Q9S7C9 OMA:DSRESDH PhylomeDB:Q9S7C9
ProtClustDB:CLSN2679445 Genevestigator:Q9S7C9 GermOnline:AT1G20900
InterPro:IPR005175 InterPro:IPR014476 Pfam:PF03479
PIRSF:PIRSF016021 Uniprot:Q9S7C9
Length = 311
Score = 158 (60.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/92 (40%), Positives = 53/92 (57%)
Query: 113 RPKRSPASDSQAL-KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVA 171
RP P + S A KR RGRPPG+ K + + + + A HV+ + G DIV
Sbjct: 72 RPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPII---VTRDSPNALRSHVLEVSPGADIVE 128
Query: 172 KMLSFSQQRPRVVCILSGRGTVSSVTLRQPAT 203
+ +++++R R V +L G GTVS+VTLRQP T
Sbjct: 129 SVSTYARRRGRGVSVLGGNGTVSNVTLRQPVT 160
>TAIR|locus:2099956 [details] [associations]
symbol:AGF2 "AT-hook protein of GA feedback 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132975
HOGENOM:HOG000239043 InterPro:IPR005175 InterPro:IPR014476
Pfam:PF03479 PIRSF:PIRSF016021 EMBL:AY086028 EMBL:BT024777
EMBL:BR000351 IPI:IPI00516447 PIR:T47695 RefSeq:NP_191115.1
UniGene:At.35015 ProteinModelPortal:Q9M2S3 SMR:Q9M2S3 PaxDb:Q9M2S3
PRIDE:Q9M2S3 EnsemblPlants:AT3G55560.1 GeneID:824721
KEGG:ath:AT3G55560 TAIR:At3g55560 eggNOG:NOG301688
InParanoid:Q9M2S3 OMA:QKEENDD PhylomeDB:Q9M2S3
ProtClustDB:CLSN2915781 Genevestigator:Q9M2S3 Uniprot:Q9M2S3
Length = 310
Score = 152 (58.6 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 113 RPKRSPASDSQAL-KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVA 171
+P P S S + +R RGRPPG+ K + + + + + HV+ I G D+
Sbjct: 74 QPAVEPGSGSGSTGRRPRGRPPGSKNKPKSPVV---VTKESPNSLQSHVLEIATGADVAE 130
Query: 172 KMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVT----YEVEALC 216
+ +F+++R R V +LSG G V++VTLRQPA S V+ +E+ ++C
Sbjct: 131 SLNAFARRRGRGVSVLSGSGLVTNVTLRQPAASGGVVSLRGQFEILSMC 179
>TAIR|locus:2118051 [details] [associations]
symbol:AT4G12050 "AT4G12050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL049638 EMBL:AL161533 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 eggNOG:NOG281764
ProtClustDB:CLSN2685548 EMBL:BT009731 EMBL:AK228172 EMBL:AB493679
EMBL:BR000362 IPI:IPI00527206 PIR:T06612 RefSeq:NP_192942.1
UniGene:At.33511 UniGene:At.69504 ProteinModelPortal:Q9SZ70
SMR:Q9SZ70 PaxDb:Q9SZ70 PRIDE:Q9SZ70 DNASU:826813
EnsemblPlants:AT4G12050.1 GeneID:826813 KEGG:ath:AT4G12050
TAIR:At4g12050 InParanoid:Q9SZ70 OMA:NMDNIAN PhylomeDB:Q9SZ70
ArrayExpress:Q9SZ70 Genevestigator:Q9SZ70 Uniprot:Q9SZ70
Length = 339
Score = 150 (57.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 120 SDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQ 179
S Q +R RGRP G+ K + + + + A HV+ IG G DIV M +F+++
Sbjct: 112 SGEQMTRRPRGRPAGSKNKPKAPII---ITRDSANALRTHVMEIGDGCDIVDCMATFARR 168
Query: 180 RPRVVCILSGRGTVSSVTLRQPAT 203
R R VC++SG G+V++VT+RQP +
Sbjct: 169 RQRGVCVMSGTGSVTNVTIRQPGS 192
>TAIR|locus:2132639 [details] [associations]
symbol:AT4G22810 "AT4G22810" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161558 EMBL:AL021635 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 eggNOG:NOG281764
EMBL:AK229321 EMBL:AB493693 EMBL:BR000360 IPI:IPI00535198
PIR:T04576 RefSeq:NP_194012.1 UniGene:At.32494
ProteinModelPortal:O49662 SMR:O49662 PRIDE:O49662
EnsemblPlants:AT4G22810.1 GeneID:828380 KEGG:ath:AT4G22810
TAIR:At4g22810 InParanoid:O49662 OMA:EETSDNI PhylomeDB:O49662
ProtClustDB:CLSN2685548 Genevestigator:O49662 Uniprot:O49662
Length = 324
Score = 147 (56.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 121 DSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQR 180
D Q +R RGRP G+ K + + + + A HV+ IG G D+V + +F+++R
Sbjct: 100 DHQMTRRPRGRPAGSKNKPKPPII---ITRDSANALRTHVMEIGDGCDLVESVATFARRR 156
Query: 181 PRVVCILSGRGTVSSVTLRQPAT 203
R VC++SG G V++VT+RQP +
Sbjct: 157 QRGVCVMSGTGNVTNVTIRQPGS 179
>TAIR|locus:505006460 [details] [associations]
symbol:AHL20 "AT4G14465" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0042742 "defense response to
bacterium" evidence=IMP] EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0042742 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BT006423
EMBL:AK118702 EMBL:AK227935 EMBL:BR000356 IPI:IPI00521749
RefSeq:NP_567432.1 UniGene:At.33280 UniGene:At.67625
ProteinModelPortal:Q8GWQ2 SMR:Q8GWQ2 IntAct:Q8GWQ2 PaxDb:Q8GWQ2
PRIDE:Q8GWQ2 EnsemblPlants:AT4G14465.1 GeneID:827093
KEGG:ath:AT4G14465 TAIR:At4g14465 eggNOG:NOG328801
InParanoid:Q8GWQ2 OMA:YERLPME PhylomeDB:Q8GWQ2
ProtClustDB:CLSN2917544 Genevestigator:Q8GWQ2 Uniprot:Q8GWQ2
Length = 281
Score = 142 (55.0 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 126 KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVC 185
+R RGRPPG+ K + A + ++ + A HV+ I G D+ + FS++R R VC
Sbjct: 67 RRPRGRPPGSKNKPK-API--FVTRDSPNALRSHVLEISDGSDVADTIAHFSRRRQRGVC 123
Query: 186 ILSGRGTVSSVTLRQPA 202
+LSG G+V++VTLRQ A
Sbjct: 124 VLSGTGSVANVTLRQAA 140
>TAIR|locus:2050946 [details] [associations]
symbol:AHL22 "AT2G45430" species:3702 "Arabidopsis
thaliana" [GO:0003680 "AT DNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] [GO:0010359 "regulation of anion channel
activity" evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic
process" evidence=RCA] GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009640 GO:GO:0010228 EMBL:AC002387
GO:GO:0003680 GO:GO:0009647 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BT014980
EMBL:BT020250 EMBL:AB493592 EMBL:BR000358 IPI:IPI00522782
PIR:D84890 RefSeq:NP_182067.1 UniGene:At.36631
ProteinModelPortal:O22130 SMR:O22130 STRING:O22130 PRIDE:O22130
EnsemblPlants:AT2G45430.1 GeneID:819151 KEGG:ath:AT2G45430
TAIR:At2g45430 eggNOG:NOG281764 InParanoid:O22130 OMA:MEVANGC
PhylomeDB:O22130 ProtClustDB:CLSN2913042 ArrayExpress:O22130
Genevestigator:O22130 Uniprot:O22130
Length = 317
Score = 143 (55.4 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 121 DSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQR 180
D+ +R RGRP G+ K + + + + A HV+ + G D++ + F+++R
Sbjct: 84 DNHITRRPRGRPAGSKNKPKPPII---ITRDSANALKSHVMEVANGCDVMESVTVFARRR 140
Query: 181 PRVVCILSGRGTVSSVTLRQPATSVP 206
R +C+LSG G V++VT+RQPA SVP
Sbjct: 141 QRGICVLSGNGAVTNVTIRQPA-SVP 165
>TAIR|locus:2101916 [details] [associations]
symbol:AHL18 "AT3G60870" species:3702 "Arabidopsis
thaliana" [GO:0010228 "vegetative to reproductive phase transition
of meristem" evidence=IMP] EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0010228 EMBL:AL162295 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BR000354
IPI:IPI00534230 PIR:T47898 RefSeq:NP_191646.1 UniGene:At.54024
ProteinModelPortal:Q9LZX7 SMR:Q9LZX7 EnsemblPlants:AT3G60870.1
GeneID:825258 KEGG:ath:AT3G60870 TAIR:At3g60870 eggNOG:NOG240680
InParanoid:Q9LZX7 OMA:SANAFRC PhylomeDB:Q9LZX7
ProtClustDB:CLSN2915727 Genevestigator:Q9LZX7 Uniprot:Q9LZX7
Length = 265
Score = 140 (54.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 88 KKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEW 147
++KRGR + + L+ P+ ++ +R RGRP G+ K + +
Sbjct: 27 RQKRGREEEGVEPNNIGEDLATFPS------GEENIKKRRPRGRPAGSKNKPKAPII--- 77
Query: 148 MNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPT 207
+ + AF HV+ I D++ + F+++R R VC+L+G G V++VT+RQP V +
Sbjct: 78 VTRDSANAFRCHVMEITNACDVMESLAVFARRRQRGVCVLTGNGAVTNVTVRQPGGGVVS 137
Query: 208 VTYEVEALCL 217
+ E L L
Sbjct: 138 LHGRFEILSL 147
>TAIR|locus:2157007 [details] [associations]
symbol:AT5G49700 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 HOGENOM:HOG000239043
InterPro:IPR005175 InterPro:IPR014476 Pfam:PF03479
PIRSF:PIRSF016021 EMBL:AB025613 EMBL:AB493783 EMBL:BR000353
IPI:IPI00521619 RefSeq:NP_199781.1 UniGene:At.29772
ProteinModelPortal:Q9LTA2 EnsemblPlants:AT5G49700.1 GeneID:835033
KEGG:ath:AT5G49700 TAIR:At5g49700 eggNOG:NOG276782
InParanoid:Q9LTA2 OMA:EQKSNEM PhylomeDB:Q9LTA2
ProtClustDB:CLSN2916587 Genevestigator:Q9LTA2 Uniprot:Q9LTA2
Length = 276
Score = 137 (53.3 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 29/93 (31%), Positives = 54/93 (58%)
Query: 120 SDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQ 179
S + ++R RGRPPG+ K + ++ +P+++ + G D+V + F ++
Sbjct: 50 SSIEVVRRPRGRPPGSKNKPKPPV---FVTRDTDPPMSPYILEVPSGNDVVEAINRFCRR 106
Query: 180 RPRVVCILSGRGTVSSVTLRQPATSV--PTVTY 210
+ VC+LSG G+V++VTLRQP+ + T+T+
Sbjct: 107 KSIGVCVLSGSGSVANVTLRQPSPAALGSTITF 139
>TAIR|locus:2045585 [details] [associations]
symbol:TEK "AT2G42940" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0035067 "negative regulation of
histone acetylation" evidence=IMP] [GO:1900111 "positive regulation
of histone H3-K9 dimethylation" evidence=IMP] InterPro:IPR017956
SMART:SM00384 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
EMBL:AC006580 EMBL:AC006931 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 UniGene:At.73075
EMBL:BT010721 EMBL:BT010995 EMBL:BR000352 IPI:IPI00522466
PIR:B84860 RefSeq:NP_181822.1 UniGene:At.45674
ProteinModelPortal:Q9SJG4 SMR:Q9SJG4 IntAct:Q9SJG4 PaxDb:Q9SJG4
PRIDE:Q9SJG4 EnsemblPlants:AT2G42940.1 GeneID:818895
KEGG:ath:AT2G42940 TAIR:At2g42940 eggNOG:NOG299133
InParanoid:Q9SJG4 OMA:EISSGCD PhylomeDB:Q9SJG4
ProtClustDB:CLSN2714418 ArrayExpress:Q9SJG4 Genevestigator:Q9SJG4
Uniprot:Q9SJG4
Length = 257
Score = 135 (52.6 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 101 GQVSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHV 160
G + L LP + + + + KR RGRP G+ K + + + + + +
Sbjct: 28 GNTNNNLRALPKAVQPVSSIEGEMAKRPRGRPAGSKNKPKPPII---VTHDSPNSLRANA 84
Query: 161 ISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPATSVPTVT----YEVEAL 215
+ I G DI + F++++ R +CILS G V++VTLRQPA+S VT YE+ +L
Sbjct: 85 VEISSGCDICETLSDFARRKQRGLCILSANGCVTNVTLRQPASSGAIVTLHGRYEILSL 143
>TAIR|locus:2063469 [details] [associations]
symbol:GIK "GIANT KILLER" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003680 "AT DNA binding" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0048440 "carpel development" evidence=IMP] [GO:0048653 "anther
development" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] GO:GO:0045892 GO:GO:0005654 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0048653 EMBL:AC004667
GO:GO:0048440 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021
ProtClustDB:CLSN2686011 EMBL:BR000357 IPI:IPI00519627 PIR:E84766
RefSeq:NP_181070.1 UniGene:At.66313 ProteinModelPortal:O82166
SMR:O82166 PRIDE:O82166 EnsemblPlants:AT2G35270.1 GeneID:818094
KEGG:ath:AT2G35270 TAIR:At2g35270 eggNOG:NOG294437
InParanoid:O82166 OMA:VFECIST PhylomeDB:O82166 ArrayExpress:O82166
Genevestigator:O82166 Uniprot:O82166
Length = 285
Score = 136 (52.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 34/100 (34%), Positives = 60/100 (60%)
Query: 120 SDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQ 179
S ++R RGRP G+ K + + SA A H++ +G G D+ + +++++
Sbjct: 72 SGDLVMRRPRGRPAGSKNKPKPPVIVT--RESANTLRA-HILEVGSGCDVFECISTYARR 128
Query: 180 RPRVVCILSGRGTVSSVTLRQP--ATSVPTV--TYEVEAL 215
R R +C+LSG GTV++V++RQP A +V T+ T+E+ +L
Sbjct: 129 RQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSL 168
>TAIR|locus:2129490 [details] [associations]
symbol:AT4G17800 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0000041 "transition metal ion
transport" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161547 EMBL:Z97344 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:AF446359
EMBL:AY097416 EMBL:BR000359 IPI:IPI00531456 PIR:C71448
RefSeq:NP_193515.1 UniGene:At.20660 ProteinModelPortal:O23620
SMR:O23620 PRIDE:O23620 EnsemblPlants:AT4G17800.1 GeneID:827502
KEGG:ath:AT4G17800 TAIR:At4g17800 eggNOG:NOG316917
InParanoid:O23620 OMA:AHILEVT PhylomeDB:O23620
ProtClustDB:CLSN2686011 ArrayExpress:O23620 Genevestigator:O23620
Uniprot:O23620
Length = 292
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/86 (30%), Positives = 51/86 (59%)
Query: 126 KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVC 185
+R RGRPPG+ K + + + + H++ + G D+ + +++++R R +C
Sbjct: 82 RRPRGRPPGSKNKPKPPVI---ITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGIC 138
Query: 186 ILSGRGTVSSVTLRQPATSVPTVTYE 211
+LSG GTV++V++RQP+ + VT +
Sbjct: 139 VLSGSGTVTNVSIRQPSAAGAVVTLQ 164
>TAIR|locus:2122148 [details] [associations]
symbol:AGF1 "AT4G35390" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009938 "negative regulation of gibberellic acid mediated
signaling pathway" evidence=IEP] GO:GO:0005634 EMBL:CP002687
GO:GO:0003700 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 GO:GO:0009938
EMBL:BT014971 EMBL:BT015845 EMBL:BR000361 IPI:IPI00529108
RefSeq:NP_195265.2 UniGene:At.31419 ProteinModelPortal:Q6DBQ1
SMR:Q6DBQ1 PRIDE:Q6DBQ1 EnsemblPlants:AT4G35390.1 GeneID:829692
KEGG:ath:AT4G35390 TAIR:At4g35390 InParanoid:Q6DBQ1 OMA:FANAVYD
PhylomeDB:Q6DBQ1 ProtClustDB:CLSN2918281 Genevestigator:Q6DBQ1
Uniprot:Q6DBQ1
Length = 299
Score = 130 (50.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 108 SPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGE 167
+P + AS S + +R RGRP G+ K + T+ + + HV+ + G
Sbjct: 45 TPTGGATSSATASGSSSGRRPRGRPAGSKNKPKPPTI---ITRDSPNVLRSHVLEVTSGS 101
Query: 168 DIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPA 202
DI + +++ +R VCI+SG G V++VT+RQPA
Sbjct: 102 DISEAVSTYATRRGCGVCIISGTGAVTNVTIRQPA 136
>TAIR|locus:2012537 [details] [associations]
symbol:AT1G14490 "AT1G14490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677
EMBL:AC012188 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BT029503
EMBL:AB493457 EMBL:BR000364 IPI:IPI00543152 PIR:G86279
RefSeq:NP_172901.1 UniGene:At.49445 ProteinModelPortal:Q9M9R4
EnsemblPlants:AT1G14490.1 GeneID:838011 KEGG:ath:AT1G14490
TAIR:At1g14490 eggNOG:NOG314566 InParanoid:Q9M9R4 OMA:TIDPPMS
PhylomeDB:Q9M9R4 ProtClustDB:CLSN2682952 Genevestigator:Q9M9R4
Uniprot:Q9M9R4
Length = 206
Score = 117 (46.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 28/90 (31%), Positives = 51/90 (56%)
Query: 123 QALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPR 182
+ + R RGRP G+ K + A + ++ +P+++ + G D+V + F + +
Sbjct: 2 ETVGRPRGRPRGSKNKPK-APIFVTIDPP----MSPYILEVPSGNDVVEALNRFCRGKAI 56
Query: 183 VVCILSGRGTVSSVTLRQPATSVP--TVTY 210
C+LSG G+V+ VTLRQP+ + P T+T+
Sbjct: 57 GFCVLSGSGSVADVTLRQPSPAAPGSTITF 86
>TAIR|locus:2179053 [details] [associations]
symbol:AT5G28590 "AT5G28590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 IPI:IPI00539891 RefSeq:NP_198211.1
UniGene:At.55073 ProteinModelPortal:F4K8J6
EnsemblPlants:AT5G28590.1 GeneID:832956 KEGG:ath:AT5G28590
OMA:HTITSSA GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
Uniprot:F4K8J6
Length = 216
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 150 SSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPAT 203
S G F PH+++I GED+ K++ F+QQ +C+LS G++S+ +L A+
Sbjct: 24 SKTGQCFTPHIVNITPGEDVAEKIVLFTQQSKHQLCVLSASGSISNASLSHLAS 77
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 246 246 0.0010 113 3 11 22 0.44 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 599 (64 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.67u 0.15s 26.82t Elapsed: 00:00:01
Total cpu time: 26.67u 0.15s 26.82t Elapsed: 00:00:01
Start: Sat May 11 09:25:08 2013 End: Sat May 11 09:25:09 2013