Query 025939
Match_columns 246
No_of_seqs 113 out of 1108
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 11:16:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025939.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025939hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03002 oxidoreductase, 2OG-F 100.0 3E-54 6.5E-59 372.9 25.9 243 1-246 1-243 (332)
2 COG3491 PcbC Isopenicillin N s 100.0 3.2E-51 7E-56 337.5 21.0 219 13-246 2-230 (322)
3 PTZ00273 oxidase reductase; Pr 100.0 2.1E-50 4.5E-55 348.3 22.6 223 13-246 2-234 (320)
4 PLN02485 oxidoreductase 100.0 3.5E-49 7.5E-54 341.7 22.6 225 11-246 2-245 (329)
5 PLN02254 gibberellin 3-beta-di 100.0 1E-48 2.2E-53 340.7 21.1 209 14-246 54-266 (358)
6 PLN02750 oxidoreductase, 2OG-F 100.0 2.1E-48 4.5E-53 338.4 22.5 217 14-246 24-250 (345)
7 PLN02997 flavonol synthase 100.0 2.3E-48 5E-53 334.7 21.9 207 14-246 30-238 (325)
8 PLN02276 gibberellin 20-oxidas 100.0 3.8E-48 8.2E-53 338.2 21.5 217 14-246 38-261 (361)
9 PLN02216 protein SRG1 100.0 3.5E-48 7.7E-53 337.7 21.2 209 15-246 51-266 (357)
10 PLN02758 oxidoreductase, 2OG-F 100.0 1E-47 2.2E-52 335.2 21.0 210 14-246 50-268 (361)
11 PLN02515 naringenin,2-oxogluta 100.0 2.6E-47 5.6E-52 331.9 21.6 211 15-246 36-252 (358)
12 PLN02156 gibberellin 2-beta-di 100.0 3.4E-47 7.5E-52 328.1 22.0 214 10-246 20-236 (335)
13 PLN02639 oxidoreductase, 2OG-F 100.0 8.8E-47 1.9E-51 327.2 21.1 208 14-246 35-246 (337)
14 PLN02912 oxidoreductase, 2OG-F 100.0 8.6E-47 1.9E-51 327.9 20.8 208 14-246 39-252 (348)
15 PLN00417 oxidoreductase, 2OG-F 100.0 2E-46 4.4E-51 325.6 21.3 211 13-246 41-259 (348)
16 PLN03178 leucoanthocyanidin di 100.0 1.2E-46 2.7E-51 328.8 19.5 210 14-246 45-266 (360)
17 PLN02947 oxidoreductase 100.0 2.5E-46 5.5E-51 327.2 20.9 210 13-246 63-280 (374)
18 PLN02984 oxidoreductase, 2OG-F 100.0 3.3E-46 7.2E-51 322.7 21.0 214 11-246 33-255 (341)
19 PLN02704 flavonol synthase 100.0 2.5E-46 5.4E-51 324.1 19.9 211 13-246 39-254 (335)
20 PLN02299 1-aminocyclopropane-1 100.0 2E-46 4.3E-51 322.3 19.0 205 13-246 3-214 (321)
21 PLN02393 leucoanthocyanidin di 100.0 2.6E-46 5.6E-51 326.8 19.4 210 13-246 48-269 (362)
22 PLN02904 oxidoreductase 100.0 8.1E-46 1.7E-50 322.7 21.4 209 14-246 49-263 (357)
23 KOG0143 Iron/ascorbate family 100.0 3.7E-45 8.1E-50 313.7 21.9 213 12-246 13-233 (322)
24 PLN02365 2-oxoglutarate-depend 100.0 4E-45 8.6E-50 312.1 20.8 202 13-246 2-207 (300)
25 PLN02403 aminocyclopropanecarb 100.0 4.8E-44 1E-48 304.9 19.2 200 16-245 2-208 (303)
26 PLN03001 oxidoreductase, 2OG-F 100.0 5.3E-34 1.2E-38 238.5 13.7 167 59-246 1-171 (262)
27 PF14226 DIOX_N: non-haem diox 99.9 2.3E-27 5E-32 175.6 7.4 113 17-133 1-115 (116)
28 PLN03176 flavanone-3-hydroxyla 99.8 1.8E-18 3.9E-23 127.9 9.4 74 15-88 36-115 (120)
29 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.1 7.8E-11 1.7E-15 84.2 4.3 53 184-246 2-56 (98)
30 PRK08130 putative aldolase; Va 84.5 1.4 3.1E-05 35.7 4.0 37 15-51 126-162 (213)
31 PRK08333 L-fuculose phosphate 83.4 1.6 3.5E-05 34.6 3.8 37 15-51 119-155 (184)
32 PRK05874 L-fuculose-phosphate 78.9 2.7 5.8E-05 34.3 3.7 36 16-51 127-162 (217)
33 PF07350 DUF1479: Protein of u 78.2 1.7 3.7E-05 38.9 2.5 54 15-69 48-101 (416)
34 smart00702 P4Hc Prolyl 4-hydro 75.3 15 0.00032 28.6 7.0 75 154-246 60-146 (178)
35 PRK06833 L-fuculose phosphate 74.3 4.3 9.3E-05 33.0 3.7 37 15-51 123-159 (214)
36 PF00596 Aldolase_II: Class II 72.6 2.5 5.4E-05 33.3 1.9 37 15-51 122-159 (184)
37 PRK08660 L-fuculose phosphate 71.7 6 0.00013 31.2 3.9 36 15-51 114-149 (181)
38 PRK08087 L-fuculose phosphate 71.1 5.8 0.00013 32.3 3.8 36 16-51 122-157 (215)
39 TIGR02409 carnitine_bodg gamma 70.2 6.9 0.00015 34.6 4.3 52 14-68 107-159 (366)
40 PRK03634 rhamnulose-1-phosphat 69.1 6.3 0.00014 33.4 3.7 36 16-51 179-214 (274)
41 PRK06755 hypothetical protein; 69.0 5.6 0.00012 32.3 3.2 36 16-51 136-171 (209)
42 TIGR02624 rhamnu_1P_ald rhamnu 67.7 8 0.00017 32.7 4.0 36 16-51 177-212 (270)
43 TIGR01086 fucA L-fuculose phos 64.7 8.2 0.00018 31.3 3.4 36 16-51 121-156 (214)
44 PRK06557 L-ribulose-5-phosphat 64.3 7.7 0.00017 31.6 3.2 37 15-51 129-167 (221)
45 PRK09553 tauD taurine dioxygen 64.1 14 0.00031 31.2 4.9 52 15-69 14-65 (277)
46 PRK06357 hypothetical protein; 61.1 14 0.00029 30.2 4.1 36 16-51 130-171 (216)
47 TIGR03328 salvage_mtnB methylt 60.0 13 0.00029 29.6 3.8 35 16-51 126-163 (193)
48 PF13640 2OG-FeII_Oxy_3: 2OG-F 58.3 5.9 0.00013 27.5 1.3 37 186-230 1-49 (100)
49 cd00398 Aldolase_II Class II A 57.7 8.8 0.00019 31.0 2.4 37 15-51 121-159 (209)
50 PRK07490 hypothetical protein; 52.7 17 0.00037 30.2 3.4 36 16-51 133-169 (245)
51 PRK06661 hypothetical protein; 51.3 18 0.00039 29.8 3.3 36 16-51 123-160 (231)
52 PF11243 DUF3045: Protein of u 50.1 15 0.00032 24.7 2.1 20 32-51 36-55 (89)
53 PLN00052 prolyl 4-hydroxylase; 48.2 89 0.0019 27.1 7.2 46 156-219 114-171 (310)
54 PRK06754 mtnB methylthioribulo 47.3 23 0.0005 28.6 3.3 35 16-51 137-172 (208)
55 TIGR02410 carnitine_TMLD trime 43.9 36 0.00077 30.1 4.2 51 15-68 99-151 (362)
56 PF01471 PG_binding_1: Putativ 42.9 39 0.00084 20.6 3.2 42 29-70 3-44 (57)
57 PF06820 Phage_fiber_C: Putati 42.8 22 0.00048 22.4 1.9 37 203-243 16-62 (64)
58 COG0289 DapB Dihydrodipicolina 41.9 72 0.0016 26.9 5.4 44 19-65 73-117 (266)
59 PF03668 ATP_bind_2: P-loop AT 39.9 52 0.0011 28.1 4.4 28 35-64 18-45 (284)
60 PRK05834 hypothetical protein; 35.3 54 0.0012 26.2 3.6 36 16-51 121-160 (194)
61 PRK07044 aldolase II superfami 34.8 51 0.0011 27.5 3.6 36 16-51 138-174 (252)
62 PF02633 Creatininase: Creatin 33.8 80 0.0017 25.9 4.6 49 14-62 70-122 (237)
63 PF10055 DUF2292: Uncharacteri 32.6 35 0.00076 19.6 1.5 20 209-229 13-32 (38)
64 PRK05467 Fe(II)-dependent oxyg 32.5 1.9E+02 0.0041 23.8 6.5 9 186-194 82-90 (226)
65 PRK09220 methylthioribulose-1- 31.9 68 0.0015 25.8 3.8 35 16-51 134-171 (204)
66 PF02668 TauD: Taurine catabol 31.9 86 0.0019 25.5 4.5 35 29-66 24-58 (258)
67 PRK08193 araD L-ribulose-5-pho 31.9 73 0.0016 26.2 4.0 36 16-51 124-172 (231)
68 TIGR01573 cas2 CRISPR-associat 31.6 1.4E+02 0.0031 20.7 4.9 49 19-67 6-59 (95)
69 PLN02452 phosphoserine transam 30.9 91 0.002 27.6 4.7 51 16-67 299-361 (365)
70 PF01113 DapB_N: Dihydrodipico 30.6 1E+02 0.0022 22.4 4.2 44 19-65 71-115 (124)
71 PF08823 PG_binding_2: Putativ 30.3 87 0.0019 20.8 3.4 34 28-61 15-48 (74)
72 COG1402 Uncharacterized protei 29.8 1.8E+02 0.0038 24.4 5.9 42 27-68 88-132 (250)
73 PRK06486 hypothetical protein; 28.8 67 0.0015 27.0 3.3 36 16-51 148-185 (262)
74 PRK13883 conjugal transfer pro 27.1 82 0.0018 24.2 3.2 33 19-51 54-86 (151)
75 PF00072 Response_reg: Respons 26.3 71 0.0015 21.8 2.7 57 15-71 44-102 (112)
76 PRK15331 chaperone protein Sic 26.3 69 0.0015 25.0 2.7 41 28-69 10-50 (165)
77 TIGR02130 dapB_plant dihydrodi 26.0 1.5E+02 0.0034 25.1 5.0 39 18-59 72-111 (275)
78 PF07283 TrbH: Conjugal transf 24.6 85 0.0018 23.1 2.8 34 19-52 26-59 (121)
79 PRK13835 conjugal transfer pro 23.7 95 0.0021 23.6 3.0 30 18-48 59-88 (145)
80 COG1741 Pirin-related protein 23.2 75 0.0016 27.0 2.6 32 202-233 56-93 (276)
81 COG1660 Predicted P-loop-conta 22.7 1.2E+02 0.0027 25.7 3.7 28 35-64 18-45 (286)
82 TIGR00760 araD L-ribulose-5-ph 22.6 1.3E+02 0.0027 24.8 3.8 36 16-51 125-173 (231)
83 PRK10628 LigB family dioxygena 22.2 1.2E+02 0.0026 25.3 3.6 37 13-50 107-148 (246)
84 cd00379 Ribosomal_L10_P0 Ribos 21.5 3.2E+02 0.0069 20.4 5.7 37 28-64 4-41 (155)
85 PF13309 HTH_22: HTH domain 21.3 86 0.0019 20.1 2.1 21 29-49 24-44 (64)
86 COG3113 Predicted NTP binding 20.9 1.9E+02 0.0041 20.5 3.8 39 16-55 40-83 (99)
87 PF03113 RSV_NS2: Respiratory 20.6 1E+02 0.0022 21.6 2.4 41 11-51 7-47 (124)
88 PF11848 DUF3368: Domain of un 20.4 2.1E+02 0.0045 17.0 3.5 27 31-63 21-47 (48)
89 TIGR03581 EF_0839 conserved hy 20.0 2.7E+02 0.0058 22.9 5.0 38 25-63 160-198 (236)
No 1
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3e-54 Score=372.92 Aligned_cols=243 Identities=65% Similarity=1.171 Sum_probs=198.9
Q ss_pred CCCccCCCCCCCCCCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC
Q 025939 1 MENYGRSKNGAEAQTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN 80 (246)
Q Consensus 1 ~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 80 (246)
|||.-.-. ++....||+|||+..++..++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 1 ~~~~~~~~--~~~~~~iP~IDl~~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~ 78 (332)
T PLN03002 1 MENHTKDS--TMKVSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRN 78 (332)
T ss_pred CCcccccc--cCCCCCCCEEeCCchhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccC
Confidence 55554333 3456799999999766667889999999999999999999999999999999999999999999999776
Q ss_pred CCCcccccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 025939 81 EKHRGYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVAR 160 (246)
Q Consensus 81 ~~~~GY~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~ 160 (246)
...+||.+.+.+..........|++|.|.++.+.+.+.+.....++.+|.||.++.+|+|++++++|+++|.+|+..||+
T Consensus 79 ~~~~GY~~~~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~ 158 (332)
T PLN03002 79 EKHRGYTPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAK 158 (332)
T ss_pred CCCCCcCcccccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 66899998877665433223479999999986554443332334567899997555789999999999999999999999
Q ss_pred HHHHhCCCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEe
Q 025939 161 IIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWED 240 (246)
Q Consensus 161 ~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~ 240 (246)
+|+++||+++++|.+.+.+..+.+.||++|||+++.. ....+|+++|||+|+||||+||+++||||+.+++..+++|++
T Consensus 159 ~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~-~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~ 237 (332)
T PLN03002 159 LLALALDLDVGYFDRTEMLGKPIATMRLLRYQGISDP-SKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEY 237 (332)
T ss_pred HHHHHcCCChHHhccccccCCCchheeeeeCCCCCCc-ccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEE
Confidence 9999999999999843355666789999999998654 235789999999999999999999999998764212347999
Q ss_pred CCCCCC
Q 025939 241 VAPMKG 246 (246)
Q Consensus 241 V~p~~g 246 (246)
|+|+||
T Consensus 238 Vpp~pg 243 (332)
T PLN03002 238 VPPIKG 243 (332)
T ss_pred CCCCCC
Confidence 999987
No 2
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=3.2e-51 Score=337.47 Aligned_cols=219 Identities=41% Similarity=0.757 Sum_probs=192.9
Q ss_pred CCCccceeeCCC-----c-chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCC--Cc
Q 025939 13 AQTVLNCIDLSS-----P-DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEK--HR 84 (246)
Q Consensus 13 ~~~~iPvIDls~-----~-~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~--~~ 84 (246)
.+..||+|||+. + ++..++.+|.+||+++|||||+||||+..++++++++++.||+||.|+|.++..... .+
T Consensus 2 ~~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~r 81 (322)
T COG3491 2 STRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHR 81 (322)
T ss_pred CCCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCcccc
Confidence 467899999982 1 346789999999999999999999999999999999999999999999999877654 99
Q ss_pred ccccCcccccCCCCCCCCCcceeeeecccCCCCCCC--CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 025939 85 GYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARII 162 (246)
Q Consensus 85 GY~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~--~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l 162 (246)
||.+.+.|... +..|++|.++++.+.....+. ...+++++|.|| .+|+|++.+..|++.|..++.+||++|
T Consensus 82 GY~~~~~E~t~----g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP---~ip~~r~~ll~~~~~~~~~~~rLL~ai 154 (322)
T COG3491 82 GYTPHGGELTD----GEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP---AIPGLRDALLQYYRAMTAVGLRLLRAI 154 (322)
T ss_pred ccccCcccccC----CccchhhhcccccccccccCCCccCCCcCCCCCCc---cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888754 345999999999876633333 244778999999 489999999999999999999999999
Q ss_pred HHhCCCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCC
Q 025939 163 ALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVA 242 (246)
Q Consensus 163 ~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~ 242 (246)
|.+|+|++++|. ...+++.++||+++||+.+.. .+.-+.|+|||+|+||+|+||.++||||+++.|. |++|+
T Consensus 155 A~~LdL~~d~Fd--~~~~d~~~~~RLlrYP~~~~~--~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~----Wl~v~ 226 (322)
T COG3491 155 ALGLDLPEDFFD--KRTSDPNSVLRLLRYPSRPAR--EGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGG----WLDVP 226 (322)
T ss_pred HHHcCCChhhhh--hccCCchheEEEEecCCCccc--ccccccccccCCCeEEEEEecccCCeEEecCCCC----eeECC
Confidence 999999999999 568899999999999987764 4566779999999999999999999999999764 99999
Q ss_pred CCCC
Q 025939 243 PMKG 246 (246)
Q Consensus 243 p~~g 246 (246)
|+||
T Consensus 227 P~pg 230 (322)
T COG3491 227 PIPG 230 (322)
T ss_pred CCCC
Confidence 9997
No 3
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=2.1e-50 Score=348.28 Aligned_cols=223 Identities=38% Similarity=0.679 Sum_probs=187.2
Q ss_pred CCCccceeeCCCc------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC--CCCc
Q 025939 13 AQTVLNCIDLSSP------DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN--EKHR 84 (246)
Q Consensus 13 ~~~~iPvIDls~~------~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~ 84 (246)
+.++||||||+.. ++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++... ...+
T Consensus 2 ~~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~ 81 (320)
T PTZ00273 2 TRASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHR 81 (320)
T ss_pred CCCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCC
Confidence 4678999999732 2345789999999999999999999999999999999999999999999998543 3479
Q ss_pred ccccCcccccCCCCCCCCCcceeeeecccCCCCCCC--CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 025939 85 GYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARII 162 (246)
Q Consensus 85 GY~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~--~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l 162 (246)
||.+.+.+.... ....|++|.|.++...+...+. ....+..+|.||. .+|+|++++++|+++|.+++.+|+++|
T Consensus 82 GY~~~~~e~~~~--~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~l 157 (320)
T PTZ00273 82 GYGAFGAEQLDP--SKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPT--QVEGWMELMETHYRDMQALALVLLRAL 157 (320)
T ss_pred CCCCccccccCC--CCCCCccceEEeeccCCcccchhhccccccCCCCCCC--cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999887766432 2346999999998654433322 1223456899996 578999999999999999999999999
Q ss_pred HHhCCCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCC
Q 025939 163 ALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVA 242 (246)
Q Consensus 163 ~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~ 242 (246)
+++||+++++|. ..+..+.+.||++|||+++.. +...+|+++|||+|+||||+||.++||||++++| +|++|+
T Consensus 158 a~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~~~-~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g----~Wi~V~ 230 (320)
T PTZ00273 158 ALAIGLREDFFD--SKFMEPLSVFRMKHYPALPQT-KKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSG----EWMDVP 230 (320)
T ss_pred HHHhCcCHHHHH--HhhCCCcceeeeeecCCCCCc-cccCcccccccCCCeEEEEecCCCCceEEECCCC----CEEeCC
Confidence 999999999998 566777889999999998753 2467899999999999999999999999998766 599999
Q ss_pred CCCC
Q 025939 243 PMKG 246 (246)
Q Consensus 243 p~~g 246 (246)
|+||
T Consensus 231 p~pg 234 (320)
T PTZ00273 231 PLEG 234 (320)
T ss_pred CCCC
Confidence 9987
No 4
>PLN02485 oxidoreductase
Probab=100.00 E-value=3.5e-49 Score=341.72 Aligned_cols=225 Identities=31% Similarity=0.540 Sum_probs=182.6
Q ss_pred CCCCCccceeeCCCc-------------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhh
Q 025939 11 AEAQTVLNCIDLSSP-------------DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKV 77 (246)
Q Consensus 11 ~~~~~~iPvIDls~~-------------~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~ 77 (246)
+.....||||||+.. ++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++
T Consensus 2 ~~~~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~ 81 (329)
T PLN02485 2 ATDFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKI 81 (329)
T ss_pred CCCCCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhh
Confidence 455678999999732 1245789999999999999999999999999999999999999999999998
Q ss_pred ccC--CCCcccccCcccccCCCCCCCCCcceeeeecccCCCCCCCC-CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 025939 78 LRN--EKHRGYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPES-EKPFYGPNVWPAPDCLPGWRETMERFQREALEV 154 (246)
Q Consensus 78 ~~~--~~~~GY~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~-~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l 154 (246)
... ...+||++.+.+.. .+..|++|.|.+..+.+...... ...+..+|.||. .+++|++.+++|+++|.++
T Consensus 82 ~~~~~~~~rGY~~~g~~~~----~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~--~~~~fr~~~~~y~~~~~~l 155 (329)
T PLN02485 82 KMTPAAGYRGYQRIGENVT----KGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPE--NPQEFKALMEEYIKLCTDL 155 (329)
T ss_pred cccCCCCCCCccccccccc----CCCCCcchhhhhcccCCCCcccccccccCCCCCCCC--ccHHHHHHHHHHHHHHHHH
Confidence 653 34789998875542 23468999998875432222111 123456899997 4789999999999999999
Q ss_pred HHHHHHHHHHhCCCCcccccCcccccCcccceEecccCCCCCCC--CCCccccccccccCceeEEeeC-CCCceeEeeCC
Q 025939 155 AKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDP--SKGMYGAGAHSDYGLITLLATD-EVAGLQICKDR 231 (246)
Q Consensus 155 ~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~--~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~ 231 (246)
+.+||++|+++||+++++|.+ ....++.+.||++|||+++... ++..+|+++|||+|+||||+|+ +++||||++++
T Consensus 156 ~~~ll~~~a~~Lgl~~~~f~~-~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~ 234 (329)
T PLN02485 156 SRKILRGIALALGGSPDEFEG-KMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLS 234 (329)
T ss_pred HHHHHHHHHHHcCCChHHhhh-hhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCC
Confidence 999999999999999888872 1234566789999999987522 3467899999999999999997 58999999877
Q ss_pred CCCCCCeEeCCCCCC
Q 025939 232 DAKPQLWEDVAPMKG 246 (246)
Q Consensus 232 ~~~~~~W~~V~p~~g 246 (246)
| +|++|+|+||
T Consensus 235 g----~Wi~V~p~pg 245 (329)
T PLN02485 235 G----EWIWAIPIPG 245 (329)
T ss_pred C----cEEECCCCCC
Confidence 6 4999999997
No 5
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=1e-48 Score=340.72 Aligned_cols=209 Identities=26% Similarity=0.439 Sum_probs=173.5
Q ss_pred CCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC-CCcccccCccc
Q 025939 14 QTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE-KHRGYTPVLDE 92 (246)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~~~~e 92 (246)
..+||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .++||...+..
T Consensus 54 ~~~iPvIDl~~~---~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~Gy~~~~~~ 130 (358)
T PLN02254 54 DESIPVIDLSDP---NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSGYGVARIS 130 (358)
T ss_pred CCCCCeEeCCCH---HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccccccccc
Confidence 358999999853 46899999999999999999999999999999999999999999999986543 46788664432
Q ss_pred ccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Q 025939 93 LLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDADF 172 (246)
Q Consensus 93 ~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~ 172 (246)
.. ....+++|.|.+... +. ....|.||. .+++|++++++|+++|.+|+.+||++|+++|||++++
T Consensus 131 ~~----~~~~~w~e~~~~~~~-----p~----~~~~~~wP~--~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~ 195 (358)
T PLN02254 131 SF----FNKKMWSEGFTIMGS-----PL----EHARQLWPQ--DHTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEED 195 (358)
T ss_pred cc----cCCCCceeeEEeecC-----cc----ccchhhCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 21 234689999998521 11 124689997 4689999999999999999999999999999999888
Q ss_pred ccCcc---cccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 173 FDKPE---MLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 173 ~~~~~---~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
|.+.. ...++.+.||++|||||+.+ +..+|+++|||+|+||||+||+++||||+.++| +|++|+|+||
T Consensus 196 ~~~~~~~~~~~~~~~~lRl~~YPp~p~~--~~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~~~----~Wi~V~p~pg 266 (358)
T PLN02254 196 IKWAGPKSGSQGAQAALQLNSYPVCPDP--DRAMGLAPHTDSSLLTILYQSNTSGLQVFREGV----GWVTVPPVPG 266 (358)
T ss_pred HHHHhhcccccCcceeEEEecCCCCCCc--ccccCcCCccCCCcEEEEecCCCCCceEECCCC----EEEEcccCCC
Confidence 76211 12456689999999998753 567999999999999999999999999998764 5999999997
No 6
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.1e-48 Score=338.37 Aligned_cols=217 Identities=32% Similarity=0.470 Sum_probs=177.2
Q ss_pred CCccceeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC-CCcccccC
Q 025939 14 QTVLNCIDLSSP---DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE-KHRGYTPV 89 (246)
Q Consensus 14 ~~~iPvIDls~~---~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~~ 89 (246)
..+||+|||+.. ++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.... ..+||...
T Consensus 24 ~~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~~ 103 (345)
T PLN02750 24 DEEIPVIDLSVSTSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPMGYHDS 103 (345)
T ss_pred CCCCCeEECCCCCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccCcCcc
Confidence 468999999842 34567899999999999999999999999999999999999999999999986543 35799642
Q ss_pred cccccCCCCCCCCCcceeeeecccCCCCCCC-----CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025939 90 LDELLDPDTQVRGDYKEGYYIGVEVPEGDPE-----SEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIAL 164 (246)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~-----~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~ 164 (246)
. . ..+..|++|.|.++...+...|. .......+|.||. .+++|++++++|++.|.+|+..||++|++
T Consensus 104 ~--~----~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 175 (345)
T PLN02750 104 E--H----TKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQ--NPSHFRELCQEYARQVEKLAFKLLELISL 175 (345)
T ss_pred c--c----cccCCCceeEEEEeecccccccccccccccccccccccCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 12346999999987543211111 0001113699997 46899999999999999999999999999
Q ss_pred hCCCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEee-CCCCCCCCeEeCCC
Q 025939 165 ALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICK-DRDAKPQLWEDVAP 243 (246)
Q Consensus 165 ~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~-~~~~~~~~W~~V~p 243 (246)
+||+++++|. ..+.++.+.||++||||++.. +..+|+++|||+|+||||+||+++||||+. .+| +|++|+|
T Consensus 176 ~Lgl~~~~f~--~~~~~~~~~lR~~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~g----~Wi~V~p 247 (345)
T PLN02750 176 SLGLPADRLN--GYFKDQISFARFNHYPPCPAP--HLALGVGRHKDGGALTVLAQDDVGGLQISRRSDG----EWIPVKP 247 (345)
T ss_pred HcCCCHHHHH--HHhcCcceEEEEEecCCCCCc--ccccCcCCCCCCCeEEEEecCCCCceEEeecCCC----eEEEccC
Confidence 9999999998 566677889999999998753 467899999999999999999999999986 344 5999999
Q ss_pred CCC
Q 025939 244 MKG 246 (246)
Q Consensus 244 ~~g 246 (246)
+||
T Consensus 248 ~pg 250 (345)
T PLN02750 248 IPD 250 (345)
T ss_pred CCC
Confidence 997
No 7
>PLN02997 flavonol synthase
Probab=100.00 E-value=2.3e-48 Score=334.67 Aligned_cols=207 Identities=30% Similarity=0.474 Sum_probs=174.1
Q ss_pred CCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCCCcccccCcccc
Q 025939 14 QTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPVLDEL 93 (246)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e~ 93 (246)
..+||||||+..++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++......+||.+...
T Consensus 30 ~~~IPvIDls~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY~~~~~-- 107 (325)
T PLN02997 30 AVDVPVVDLSVSDEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGYKRNYL-- 107 (325)
T ss_pred CCCCCeEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccccCcccc--
Confidence 568999999976666789999999999999999999999999999999999999999999999877666899986532
Q ss_pred cCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccc
Q 025939 94 LDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDADFF 173 (246)
Q Consensus 94 ~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~ 173 (246)
.+..+++|.+..... +.. ....|.||. .+++|++++++|++.|.+++.+||++|+++||+++++|
T Consensus 108 -----~~~~d~~e~~~~~~~-----p~~---~~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f 172 (325)
T PLN02997 108 -----GGINNWDEHLFHRLS-----PPS---IINYKYWPK--NPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETF 172 (325)
T ss_pred -----cCCCCccceeEeeec-----Ccc---ccccccCCC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 234578887654311 110 124589996 46899999999999999999999999999999999988
Q ss_pred cCcccccC--cccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 174 DKPEMLGQ--AIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 174 ~~~~~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
. +.+.. ..+.||++|||+++.. +..+|+++|||+|+||||+||+++||||+.+ | +|++|+|+||
T Consensus 173 ~--~~~~~~~~~~~lRl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~-g----~Wi~V~p~pg 238 (325)
T PLN02997 173 T--QSIGGETAEYVLRVNFYPPTQDT--ELVIGAAAHSDMGAIALLIPNEVPGLQAFKD-E----QWLDLNYINS 238 (325)
T ss_pred H--HHhcCCcccceeeeecCCCCCCc--ccccCccCccCCCceEEEecCCCCCEEEeEC-C----cEEECCCCCC
Confidence 8 44432 3468999999998653 4679999999999999999999999999964 3 5999999987
No 8
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=3.8e-48 Score=338.20 Aligned_cols=217 Identities=23% Similarity=0.420 Sum_probs=177.9
Q ss_pred CCccceeeCCCc------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC-CCCccc
Q 025939 14 QTVLNCIDLSSP------DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGY 86 (246)
Q Consensus 14 ~~~iPvIDls~~------~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 86 (246)
..+||+|||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+||
T Consensus 38 ~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY 117 (361)
T PLN02276 38 ELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGY 117 (361)
T ss_pred CCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccc
Confidence 468999999832 1345789999999999999999999999999999999999999999999998654 357899
Q ss_pred ccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 025939 87 TPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALAL 166 (246)
Q Consensus 87 ~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~L 166 (246)
.+.+.+.. .+..|++|.|.++.......... .....+|.||. .+++|++.+++|+..|.+++.+||++|+++|
T Consensus 118 ~~~~~~~~----~~~~d~~E~~~~~~~~~~~~~~~-~~~~~~~~~p~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~L 190 (361)
T PLN02276 118 ASSHTGRF----SSKLPWKETLSFGYHADGGSSPV-VVDYFKSVLGE--DFEQFGKVYQEYCEAMKTLSLKIMELLGISL 190 (361)
T ss_pred CccCcccc----CCCCCeeeeEEEeccCccccccc-chhcccccCCc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88765542 22368999999975321111000 00123477885 4678999999999999999999999999999
Q ss_pred CCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 167 DLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 167 gl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
||++++|. ..+..+.+.||++|||+++.+ +..+|+++|||+|+||||+||.++||||+. +| +|++|+|+||
T Consensus 191 gl~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~-~g----~Wi~V~p~pg 261 (361)
T PLN02276 191 GVDRGYYR--KFFEDGDSIMRCNYYPPCQEP--ELTLGTGPHCDPTSLTILHQDQVGGLQVFV-DN----KWRSVRPRPG 261 (361)
T ss_pred CCCHHHHH--HHhcCccceeeeEeCCCCCCc--ccccCCccccCCceeEEEEecCCCceEEEE-CC----EEEEcCCCCC
Confidence 99999998 566677789999999998653 567999999999999999999999999995 44 5999999997
No 9
>PLN02216 protein SRG1
Probab=100.00 E-value=3.5e-48 Score=337.68 Aligned_cols=209 Identities=26% Similarity=0.487 Sum_probs=173.4
Q ss_pred CccceeeCCCc---c-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC-CCcccccC
Q 025939 15 TVLNCIDLSSP---D-IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE-KHRGYTPV 89 (246)
Q Consensus 15 ~~iPvIDls~~---~-~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~~ 89 (246)
.+||+|||+.. + +.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..+||...
T Consensus 51 ~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~ 130 (357)
T PLN02216 51 SEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQA 130 (357)
T ss_pred CCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCcc
Confidence 58999999842 1 2467899999999999999999999999999999999999999999999986543 47788653
Q ss_pred cccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 025939 90 LDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLD 169 (246)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 169 (246)
... ...+..|++|.|.++.. |. ....+|.||. .++.|++++++|+++|.+|+.+||++|+++|||+
T Consensus 131 ~~~----~~~~~~d~~e~~~~~~~-----p~---~~~~~~~WP~--~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 196 (357)
T PLN02216 131 FVV----SEDQKLDWADMFFLTMQ-----PV---RLRKPHLFPK--LPLPFRDTLETYSAEVKSIAKILFAKMASALEIK 196 (357)
T ss_pred ccc----cccccCCceeeeeeecc-----Cc---ccccchhccc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 321 11234699999988632 11 1246799996 5689999999999999999999999999999999
Q ss_pred cccccCcccccC-cccceEecccCCCCCCCCCCccccccccccCceeEEee-CCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 170 ADFFDKPEMLGQ-AIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLAT-DEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 170 ~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~q-d~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+++|. ..+.+ ..+.||++|||||+.+ +..+|+++|||+|+||||+| ++++||||+. +| +|++|+|+||
T Consensus 197 ~~~f~--~~~~~~~~~~lRl~~YPp~p~~--~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~-~g----~Wi~V~p~pg 266 (357)
T PLN02216 197 PEEME--KLFDDDLGQSIRMNYYPPCPQP--DQVIGLTPHSDAVGLTILLQVNEVEGLQIKK-DG----KWVSVKPLPN 266 (357)
T ss_pred HHHHH--HHhccCchheeEEeecCCCCCc--ccccCccCcccCceEEEEEecCCCCceeEEE-CC----EEEECCCCCC
Confidence 99988 55554 4578999999998753 56799999999999999999 5799999985 44 5999999997
No 10
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1e-47 Score=335.24 Aligned_cols=210 Identities=32% Similarity=0.550 Sum_probs=174.8
Q ss_pred CCccceeeCCCc---c---hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC-CCCccc
Q 025939 14 QTVLNCIDLSSP---D---IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGY 86 (246)
Q Consensus 14 ~~~iPvIDls~~---~---~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 86 (246)
..+||+|||+.. + ..+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||
T Consensus 50 ~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY 129 (361)
T PLN02758 50 PDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQGY 129 (361)
T ss_pred CCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCcccc
Confidence 458999999832 1 245689999999999999999999999999999999999999999999998754 347899
Q ss_pred ccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 025939 87 TPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALAL 166 (246)
Q Consensus 87 ~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~L 166 (246)
....... .....|++|.|.++.. +.. ...+|.||. ..++|++.+++|+++|.+++.+||++|+++|
T Consensus 130 ~~~~~~~----~~~~~d~~e~~~~~~~-----p~~---~~~~~~WP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~L 195 (361)
T PLN02758 130 GQAFVFS----EDQKLDWCNMFALGVE-----PHF---IRNPKLWPT--KPARFSETLEVYSREIRELCQRLLKYIAMTL 195 (361)
T ss_pred Ccccccc----cccccCeeEEEEeecc-----Ccc---ccccccCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6543211 1234689999988632 111 135799997 4679999999999999999999999999999
Q ss_pred CCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCC--CCceeEeeCCCCCCCCeEeCCCC
Q 025939 167 DLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDE--VAGLQICKDRDAKPQLWEDVAPM 244 (246)
Q Consensus 167 gl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~--~~GLqv~~~~~~~~~~W~~V~p~ 244 (246)
|+++++|. +.+..+.+.||++|||+|+.+ +..+|+++|||+|+||||+|++ ++||||+.+ | +|++|+|+
T Consensus 196 gl~~~~f~--~~~~~~~~~lR~~~YP~~~~~--~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~-g----~Wi~V~p~ 266 (361)
T PLN02758 196 GLKEDRFE--EMFGEAVQAVRMNYYPPCSRP--DLVLGLSPHSDGSALTVLQQGKGSCVGLQILKD-N----TWVPVHPV 266 (361)
T ss_pred CCChhhhH--HHhcCccceeeeecCCCCCCc--ccccCccCccCCceeEEEEeCCCCCCCeeeeeC-C----EEEeCCCC
Confidence 99999998 566677789999999998653 5678999999999999999974 889999875 3 59999999
Q ss_pred CC
Q 025939 245 KG 246 (246)
Q Consensus 245 ~g 246 (246)
||
T Consensus 267 pg 268 (361)
T PLN02758 267 PN 268 (361)
T ss_pred CC
Confidence 97
No 11
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=2.6e-47 Score=331.89 Aligned_cols=211 Identities=24% Similarity=0.401 Sum_probs=174.0
Q ss_pred CccceeeCCCc-----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC-CCccccc
Q 025939 15 TVLNCIDLSSP-----DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE-KHRGYTP 88 (246)
Q Consensus 15 ~~iPvIDls~~-----~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~ 88 (246)
.+||+|||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ..+||..
T Consensus 36 ~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~ 115 (358)
T PLN02515 36 DEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIV 115 (358)
T ss_pred CCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCCCccCccc
Confidence 47999999842 24567899999999999999999999999999999999999999999999986543 3579863
Q ss_pred CcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 025939 89 VLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDL 168 (246)
Q Consensus 89 ~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl 168 (246)
.+.. ...+..|++|.|.+... +.. ....|.||. .+++|++++++|+++|.+|+.+||++++++||+
T Consensus 116 --~~~~--~~~~~~d~kE~~~~~~~-----~~~---~~~~n~WP~--~~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lgl 181 (358)
T PLN02515 116 --SSHL--QGEAVQDWREIVTYFSY-----PVR---TRDYSRWPD--KPEGWRAVTEEYSEKLMGLACKLLEVLSEAMGL 181 (358)
T ss_pred --cccc--ccccccCceeeeccccC-----ccc---ccccccccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1211 12234799999876421 110 123589997 468999999999999999999999999999999
Q ss_pred CcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 169 DADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 169 ~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
++++|. +.+....+.+|++|||+++. ++..+|+++|||+|+||||+||+++||||+.++++ +|++|+|+||
T Consensus 182 ~~~~f~--~~~~~~~~~lrl~~YP~~~~--~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~---~Wi~Vpp~pg 252 (358)
T PLN02515 182 EKEALT--KACVDMDQKVVVNYYPKCPQ--PDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGK---TWITVQPVEG 252 (358)
T ss_pred ChhhHH--HhhcCccceEEEeecCCCCC--hhhccCCCCCCCCCeEEEEecCCCCceEEEECCCC---eEEECCCCCC
Confidence 999988 55566668899999999864 35678999999999999999999999999987653 6999999997
No 12
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=3.4e-47 Score=328.13 Aligned_cols=214 Identities=24% Similarity=0.420 Sum_probs=171.4
Q ss_pred CCCCCCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCCCcccccC
Q 025939 10 GAEAQTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPV 89 (246)
Q Consensus 10 ~~~~~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 89 (246)
|-.....||+|||+++ +..++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+||...
T Consensus 20 ~~~~~~~iPvIDls~~---~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~-~~~Gy~~~ 95 (335)
T PLN02156 20 CKPVPVLIPVIDLTDS---DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP-DPFGYGTK 95 (335)
T ss_pred ccCCCCCCCcccCCCh---HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC-CCcccCcc
Confidence 4445567999999854 2467899999999999999999999999999999999999999999998654 34588532
Q ss_pred cccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 025939 90 LDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLD 169 (246)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 169 (246)
.. ...+..+++|.|.+..+.. .. ....+|.||. .++.|++++++|+++|.+|+.+||++|+++||++
T Consensus 96 ~~-----~~~~~~~~~e~~~~~~~~~-----~~-~~~~~~~wp~--~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~ 162 (335)
T PLN02156 96 RI-----GPNGDVGWLEYILLNANLC-----LE-SHKTTAVFRH--TPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIE 162 (335)
T ss_pred cc-----CCCCCCCceeeEeeecCCc-----cc-cccchhcCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 11 1112358899998874311 00 0123688996 4578999999999999999999999999999996
Q ss_pred c-ccccCcccc--cCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 170 A-DFFDKPEML--GQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 170 ~-~~~~~~~~~--~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+ ++|. +.+ ..+.+.||++|||+++...+...+|+++|||+|+||||+||+++||||+.++| +|++|+|+||
T Consensus 163 ~~~~f~--~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g----~Wi~Vpp~pg 236 (335)
T PLN02156 163 PKEKLS--KLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDG----TWVDVPPDHS 236 (335)
T ss_pred cHHHHH--HHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCC----CEEEccCCCC
Confidence 4 6777 333 24567899999999875433467999999999999999999999999987665 5999999997
No 13
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.8e-47 Score=327.20 Aligned_cols=208 Identities=30% Similarity=0.499 Sum_probs=171.2
Q ss_pred CCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCC---CcccccCc
Q 025939 14 QTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEK---HRGYTPVL 90 (246)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~---~~GY~~~~ 90 (246)
..+||+|||+..++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++..... .++|...+
T Consensus 35 ~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~~ 114 (337)
T PLN02639 35 CENVPVIDLGSPDRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFN 114 (337)
T ss_pred CCCCCeEECCCccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCccccccccc
Confidence 468999999977677789999999999999999999999999999999999999999999999755322 23333222
Q ss_pred ccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 025939 91 DELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDA 170 (246)
Q Consensus 91 ~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~ 170 (246)
. ......+++|.+.+... |.. ..+|.||. .+++|++.+++|+++|.+++.+||++|+++|||++
T Consensus 115 ~-----~~~~~~~~~e~~~~~~~-----p~~----~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 178 (337)
T PLN02639 115 V-----RKEKVHNWRDYLRLHCY-----PLD----KYVPEWPS--NPPSFKEIVSTYCREVRELGFRLQEAISESLGLEK 178 (337)
T ss_pred c-----ccCcccCchheEEeeec-----CCc----ccchhCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 1 11233578888877421 111 12588996 46899999999999999999999999999999999
Q ss_pred ccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeC-CCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 171 DFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 171 ~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
++|. ..+....+.||++|||+++.+ +..+|+++|||+|+||||+|| .++||||+. +| +|++|+|+||
T Consensus 179 ~~f~--~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~-~g----~Wi~V~p~pg 246 (337)
T PLN02639 179 DYIK--NVLGEQGQHMAVNYYPPCPEP--ELTYGLPAHTDPNALTILLQDQQVAGLQVLK-DG----KWVAVNPHPG 246 (337)
T ss_pred HHHH--HHhCCCccEEEEEcCCCCCCc--ccccCCCCCcCCCceEEEEecCCcCceEeec-CC----eEEeccCCCC
Confidence 9998 556667789999999998753 567899999999999999998 499999985 34 5999999987
No 14
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.6e-47 Score=327.93 Aligned_cols=208 Identities=23% Similarity=0.379 Sum_probs=170.0
Q ss_pred CCccceeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC---CCcccc
Q 025939 14 QTVLNCIDLSSP---DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE---KHRGYT 87 (246)
Q Consensus 14 ~~~iPvIDls~~---~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY~ 87 (246)
..+||+|||+.. ++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.... ..+||.
T Consensus 39 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~ 118 (348)
T PLN02912 39 GDSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLST 118 (348)
T ss_pred CCCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccc
Confidence 457999999842 34567899999999999999999999999999999999999999999999954332 134443
Q ss_pred cCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 025939 88 PVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALD 167 (246)
Q Consensus 88 ~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 167 (246)
.... ......+++|.+.+... +.. ..+|.||. .+++|++++.+|+++|.+++.+||++|+++||
T Consensus 119 ~~~~-----~~~~~~~~~e~~~~~~~-----~~~----~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~il~~la~~Lg 182 (348)
T PLN02912 119 SFNV-----SKEKVSNWRDFLRLHCY-----PIE----DFIEEWPS--TPISFREVTAEYATSVRALVLTLLEAISESLG 182 (348)
T ss_pred cccc-----cccccCCchheEEEeec-----Ccc----cccccCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3211 11234688888877521 110 13688997 46799999999999999999999999999999
Q ss_pred CCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 168 LDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 168 l~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+++++|. ..+....+.||++||||++.+ +..+|+++|||+|+||||+||+++||||+. +| +|++|+|+||
T Consensus 183 l~~~~f~--~~~~~~~~~lrl~~YPp~~~~--~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~~-~g----~Wi~V~p~pg 252 (348)
T PLN02912 183 LEKDRVS--NTLGKHGQHMAINYYPPCPQP--ELTYGLPGHKDANLITVLLQDEVSGLQVFK-DG----KWIAVNPIPN 252 (348)
T ss_pred CCHHHHH--HHhcCccceeeeeecCCCCCh--hhcCCcCCCcCCCceEEEEECCCCceEEEE-CC----cEEECCCcCC
Confidence 9999988 556667789999999998653 457999999999999999999999999995 33 5999999987
No 15
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2e-46 Score=325.62 Aligned_cols=211 Identities=28% Similarity=0.438 Sum_probs=170.3
Q ss_pred CCCccceeeCCCc-----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC-CCccc
Q 025939 13 AQTVLNCIDLSSP-----DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE-KHRGY 86 (246)
Q Consensus 13 ~~~~iPvIDls~~-----~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY 86 (246)
..++||+|||+.. ..++.+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... ..+||
T Consensus 41 ~~~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY 120 (348)
T PLN00417 41 PEMDIPAIDLSLLLSSSDDGREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQGY 120 (348)
T ss_pred cCCCCCeEEChhhcCCCchHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCcccc
Confidence 4568999999832 23456799999999999999999999999999999999999999999999987653 47899
Q ss_pred ccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 025939 87 TPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALAL 166 (246)
Q Consensus 87 ~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~L 166 (246)
.+... .......|++|.+.+... +.. ....|.||. .+++|++.+.+|+++|.+++.+||++|+++|
T Consensus 121 ~~~~~----~~~~~~~d~~e~~~~~~~-p~~-------~~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~L 186 (348)
T PLN00417 121 GNDMI----LSDDQVLDWIDRLYLTTY-PED-------QRQLKFWPQ--VPVGFRETLHEYTMKQRLVIEKFFKAMARSL 186 (348)
T ss_pred ccccc----cccCCCcCccceeecccC-Ccc-------ccccccccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 64211 111234578888776521 111 123689996 4679999999999999999999999999999
Q ss_pred CCCcccccCcccccC-cccceEecccCCCCCCCCCCccccccccccCceeEEeeC-CCCceeEeeCCCCCCCCeEeCCCC
Q 025939 167 DLDADFFDKPEMLGQ-AIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPM 244 (246)
Q Consensus 167 gl~~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~~~~~~~W~~V~p~ 244 (246)
|+++++|. ..+.. ..+.||++||||++.+ +..+|+++|||+|+||||+|+ .++||||+. +| +|++|+|+
T Consensus 187 Gl~~~~f~--~~~~~~~~~~lRl~~YPp~~~~--~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~-~g----~Wi~V~p~ 257 (348)
T PLN00417 187 ELEENCFL--EMYGENATMDTRFNMYPPCPRP--DKVIGVKPHADGSAFTLLLPDKDVEGLQFLK-DG----KWYKAPIV 257 (348)
T ss_pred CCCHHHHH--HHhccCccceeeeeecCCCCCc--ccccCCcCccCCCceEEEEecCCCCceeEeE-CC----eEEECCCC
Confidence 99999887 44443 3467999999998753 467899999999999999996 699999985 44 59999999
Q ss_pred CC
Q 025939 245 KG 246 (246)
Q Consensus 245 ~g 246 (246)
||
T Consensus 258 pg 259 (348)
T PLN00417 258 PD 259 (348)
T ss_pred CC
Confidence 97
No 16
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=1.2e-46 Score=328.76 Aligned_cols=210 Identities=21% Similarity=0.420 Sum_probs=171.7
Q ss_pred CCccceeeCCCc------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC---CCc
Q 025939 14 QTVLNCIDLSSP------DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE---KHR 84 (246)
Q Consensus 14 ~~~iPvIDls~~------~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~ 84 (246)
...||+|||+.. .+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... .++
T Consensus 45 ~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~ 124 (360)
T PLN03178 45 GPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQ 124 (360)
T ss_pred CCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCcc
Confidence 458999999832 14567899999999999999999999999999999999999999999999987642 378
Q ss_pred ccccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025939 85 GYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIAL 164 (246)
Q Consensus 85 GY~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~ 164 (246)
||.....+. ..+..|++|.|... .. |.. ...+|.||. .+++|++++++|+++|.+++.+||++|++
T Consensus 125 Gy~~~~~~~----~~~~~d~~e~~~~~-~~----p~~---~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~ 190 (360)
T PLN03178 125 GYGSKLAAN----ASGQLEWEDYFFHL-TL----PED---KRDPSLWPK--TPPDYVPATSEYSRSLRSLATKLLAILSL 190 (360)
T ss_pred ccccccccc----cccccchhHhhccc-cC----Ccc---ccccccCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 996533221 12335777776542 11 111 124789996 57899999999999999999999999999
Q ss_pred hCCCCcccccCccccc---CcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeC
Q 025939 165 ALDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDV 241 (246)
Q Consensus 165 ~Lgl~~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V 241 (246)
+|||++++|. +.+. +..+.||++|||+++.+ +..+|+++|||+|+||||+||.++||||+.+ | +|++|
T Consensus 191 ~Lgl~~~~f~--~~~~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~-g----~Wi~V 261 (360)
T PLN03178 191 GLGLPEDRLE--KEVGGLEELLLQMKINYYPRCPQP--DLALGVEAHTDVSALTFILHNMVPGLQVLYE-G----KWVTA 261 (360)
T ss_pred HcCCCHHHHH--HHhcCcccchhhhheeccCCCCCC--ccccCcCCccCCCceEEEeeCCCCceeEeEC-C----EEEEc
Confidence 9999999998 4444 34578999999998753 4679999999999999999999999999964 3 59999
Q ss_pred CCCCC
Q 025939 242 APMKG 246 (246)
Q Consensus 242 ~p~~g 246 (246)
+|+||
T Consensus 262 ~p~pg 266 (360)
T PLN03178 262 KCVPD 266 (360)
T ss_pred CCCCC
Confidence 99987
No 17
>PLN02947 oxidoreductase
Probab=100.00 E-value=2.5e-46 Score=327.17 Aligned_cols=210 Identities=26% Similarity=0.420 Sum_probs=169.1
Q ss_pred CCCccceeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC--CCCcccc
Q 025939 13 AQTVLNCIDLSSP---DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN--EKHRGYT 87 (246)
Q Consensus 13 ~~~~iPvIDls~~---~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~GY~ 87 (246)
...+||+|||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ....||.
T Consensus 63 ~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg 142 (374)
T PLN02947 63 GNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYG 142 (374)
T ss_pred CCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeec
Confidence 4468999999853 3466799999999999999999999999999999999999999999999998644 2345664
Q ss_pred cCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 025939 88 PVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALD 167 (246)
Q Consensus 88 ~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 167 (246)
.... .......+++|.+.+... |.. ...|.||. .+++|++.+++|+++|.+|+.+||++|+++||
T Consensus 143 ~~~~----~~~~~~~~~~e~~~~~~~-----p~~----~~~~~WP~--~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lg 207 (374)
T PLN02947 143 TSFN----QNKDAVFCWRDFLKLVCH-----PLS----DVLPHWPS--SPADLRKVAATYAKATKRLFLELMEAILESLG 207 (374)
T ss_pred cccc----cccccccCceeceeeecC-----Ccc----cccccCcc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3211 112234578887776421 211 12588997 46799999999999999999999999999999
Q ss_pred CCc---ccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCC
Q 025939 168 LDA---DFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPM 244 (246)
Q Consensus 168 l~~---~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~ 244 (246)
|++ ++|. ..+....+.||++|||||+.+ +..+|+++|||+|+||||+||+++||||+. +| +|++|+|+
T Consensus 208 l~~~~~~~~~--~~~~~~~~~lrln~YPp~p~~--~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~-~g----~Wi~V~p~ 278 (374)
T PLN02947 208 IVKRGSDELL--EEFEAGSQMMVVNCYPACPEP--ELTLGMPPHSDYGFLTLLLQDEVEGLQIMH-AG----RWVTVEPI 278 (374)
T ss_pred CCccchHHHH--HHhcCcceeeeeecCCCCCCc--ccccCCCCccCCCceEEEEecCCCCeeEeE-CC----EEEeCCCC
Confidence 974 3454 344556789999999998753 567999999999999999999999999998 44 59999999
Q ss_pred CC
Q 025939 245 KG 246 (246)
Q Consensus 245 ~g 246 (246)
||
T Consensus 279 pg 280 (374)
T PLN02947 279 PG 280 (374)
T ss_pred CC
Confidence 97
No 18
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.3e-46 Score=322.73 Aligned_cols=214 Identities=23% Similarity=0.369 Sum_probs=166.9
Q ss_pred CCCCCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCC----Cccc
Q 025939 11 AEAQTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEK----HRGY 86 (246)
Q Consensus 11 ~~~~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~----~~GY 86 (246)
.....+||+|||+.. .+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... ..||
T Consensus 33 ~~~~~~IPvIDls~~----~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g~ 108 (341)
T PLN02984 33 RSKDIDIPVIDMECL----DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWGT 108 (341)
T ss_pred CCccCCCCeEeCcHH----HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccCc
Confidence 444677999999854 25799999999999999999999999999999999999999999999852222 2233
Q ss_pred ccCccccc---CCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 025939 87 TPVLDELL---DPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIA 163 (246)
Q Consensus 87 ~~~~~e~~---~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~ 163 (246)
.....+.. ........|++|.|.++... ... ..+.||.++.+++|++++++|+++|.+|+.+||++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~-----~~~----~~~~p~~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA 179 (341)
T PLN02984 109 PALTPSGKALSRGPQESNVNWVEGFNIPLSS-----LSL----LQTLSCSDPKLESFRVLMEEYGKHLTRIAVTLFEAIA 179 (341)
T ss_pred ccccccccccccccccCCCCeeeEEeCcCCc-----hhh----hhhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211111 01111246999999987321 000 0111232234679999999999999999999999999
Q ss_pred HhCCCC--cccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeC
Q 025939 164 LALDLD--ADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDV 241 (246)
Q Consensus 164 ~~Lgl~--~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V 241 (246)
++||++ +++|. ..+..+.+.||++||||++.. +..+|+++|||+|+||||+||+++||||+.+ | +|++|
T Consensus 180 ~~Lgl~~~~~~f~--~~~~~~~~~lRl~~YPp~~~~--~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~~-g----~Wv~V 250 (341)
T PLN02984 180 KTLSLELSGDQKM--SYLSESTGVIRVYRYPQCSNE--AEAPGMEVHTDSSVISILNQDEVGGLEVMKD-G----EWFNV 250 (341)
T ss_pred HHcCCCcchhHHH--HHhcCccceEEEEeCCCCCCc--ccccCccCccCCCceEEEEeCCCCCeeEeeC-C----ceEEC
Confidence 999999 88887 566777789999999998753 4678999999999999999999999999853 3 59999
Q ss_pred CCCCC
Q 025939 242 APMKG 246 (246)
Q Consensus 242 ~p~~g 246 (246)
+|+||
T Consensus 251 ~p~pg 255 (341)
T PLN02984 251 KPIAN 255 (341)
T ss_pred CCCCC
Confidence 99997
No 19
>PLN02704 flavonol synthase
Probab=100.00 E-value=2.5e-46 Score=324.11 Aligned_cols=211 Identities=28% Similarity=0.456 Sum_probs=171.0
Q ss_pred CCCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC---CCcccccC
Q 025939 13 AQTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE---KHRGYTPV 89 (246)
Q Consensus 13 ~~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY~~~ 89 (246)
...+||+|||+..++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... .++||...
T Consensus 39 ~~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~ 118 (335)
T PLN02704 39 VDPQVPTIDLSDPDEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGYGTK 118 (335)
T ss_pred cCCCCCeEECCCccHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCccccccccc
Confidence 356899999997766678999999999999999999999999999999999999999999999987542 36899754
Q ss_pred cccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 025939 90 LDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLD 169 (246)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 169 (246)
..+.. .+..++++.+..... +.. ....|.||. .+++|++++.+|+++|.+++.+||++|+++||++
T Consensus 119 ~~~~~----~~~~~~~d~~~~~~~-----p~~---~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 184 (335)
T PLN02704 119 LQKEP----EGKKAWVDHLFHRIW-----PPS---AINYQFWPK--NPPSYREVNEEYAKYLRGVADKLFKTLSLGLGLE 184 (335)
T ss_pred ccccc----cCcccceeeeEeeec-----CCc---ccchhhCcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33221 223456665543211 110 123589996 4689999999999999999999999999999999
Q ss_pred cccccCcccccC--cccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 170 ADFFDKPEMLGQ--AIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 170 ~~~~~~~~~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+++|. ..+.. ..+.||++|||+++.+ +..+|+++|||+|+||||+||.++||||+.+ | +|++|+|+||
T Consensus 185 ~~~f~--~~~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~-g----~Wi~V~p~pg 254 (335)
T PLN02704 185 EDELK--EAVGGEELEYLLKINYYPPCPRP--DLALGVVAHTDMSAITILVPNEVQGLQVFRD-D----HWFDVKYIPN 254 (335)
T ss_pred HHHHH--HHhcCCchhhhhhhhcCCCCCCc--ccccCccCccCCcceEEEecCCCCceeEeEC-C----EEEeCCCCCC
Confidence 99887 44432 3468999999998643 4679999999999999999999999999853 3 5999999987
No 20
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=2e-46 Score=322.35 Aligned_cols=205 Identities=27% Similarity=0.452 Sum_probs=168.9
Q ss_pred CCCccceeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCCCcccccC
Q 025939 13 AQTVLNCIDLSSP---DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPV 89 (246)
Q Consensus 13 ~~~~iPvIDls~~---~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 89 (246)
...+||+|||+.. ++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... .+||.+.
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~--~~gy~~~ 80 (321)
T PLN02299 3 KMESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVA--SKGLEGV 80 (321)
T ss_pred CCCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccC--CCCcccc
Confidence 3567999999842 3456789999999999999999999999999999999999999999999997532 4688765
Q ss_pred cccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 025939 90 LDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLD 169 (246)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 169 (246)
..+. +..|++|.|.++. . +. ...|.||. .++.|++.+.+|++.|.+++.+||++|+.+||++
T Consensus 81 ~~~~------~~~d~ke~~~~~~-~----~~-----~~~~~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 142 (321)
T PLN02299 81 QTEV------EDLDWESTFFLRH-L----PE-----SNLADIPD--LDDEYRKVMKDFALELEKLAEELLDLLCENLGLE 142 (321)
T ss_pred cccC------CCcCHHHHccccc-C----Cc-----cccccCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4321 2358999998851 1 11 13477996 4689999999999999999999999999999999
Q ss_pred cccccCccccc---CcccceEecccCCCCCCCCCCccccccccccCceeEEeeC-CCCceeEeeCCCCCCCCeEeCCCCC
Q 025939 170 ADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMK 245 (246)
Q Consensus 170 ~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~~~~~~~W~~V~p~~ 245 (246)
+++|. ..+. .+.+.||++||||++.+ +...|+++|||+|+||||+|+ .++||||+. +| +|++|+|.|
T Consensus 143 ~~~f~--~~~~~~~~~~~~lRl~~YPp~~~~--~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~-~g----~Wi~V~p~p 213 (321)
T PLN02299 143 KGYLK--KAFHGSKGPTFGTKVSNYPPCPKP--DLVKGLRAHTDAGGIILLFQDDKVSGLQLLK-DG----EWVDVPPMR 213 (321)
T ss_pred HHHHH--HHhcCCCCccceeeeEecCCCCCc--ccccCccCccCCCeEEEEEecCCCCCcCccc-CC----eEEECCCCC
Confidence 99887 3332 34567999999998753 356889999999999999996 599999984 44 599999998
Q ss_pred C
Q 025939 246 G 246 (246)
Q Consensus 246 g 246 (246)
|
T Consensus 214 g 214 (321)
T PLN02299 214 H 214 (321)
T ss_pred C
Confidence 6
No 21
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=2.6e-46 Score=326.78 Aligned_cols=210 Identities=30% Similarity=0.527 Sum_probs=172.6
Q ss_pred CCCccceeeCCCc---c---hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccC-CCCcc
Q 025939 13 AQTVLNCIDLSSP---D---IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN-EKHRG 85 (246)
Q Consensus 13 ~~~~iPvIDls~~---~---~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 85 (246)
..++||+|||+.. + +.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..++|
T Consensus 48 ~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~G 127 (362)
T PLN02393 48 AEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYEG 127 (362)
T ss_pred cCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCcccc
Confidence 4578999999842 2 356799999999999999999999999999999999999999999999998754 34789
Q ss_pred cc-cCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025939 86 YT-PVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIAL 164 (246)
Q Consensus 86 Y~-~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~ 164 (246)
|. ..+.+. ....|++|.|.++.. +. ....+|.||. .+++|++++++|+++|.+++.+||++|++
T Consensus 128 y~~~~~~~~-----~~~~d~~e~~~~~~~-----~~---~~~~~n~wP~--~~~~fr~~~~~y~~~~~~la~~ll~~la~ 192 (362)
T PLN02393 128 YGSRLGVEK-----GAILDWSDYYFLHYL-----PS---SLKDPNKWPS--LPPSCRELIEEYGEEVVKLCGRLMKVLSV 192 (362)
T ss_pred ccccccccc-----ccccCchhheeeeec-----Cc---cccchhhCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 94 433322 234688998887521 11 1245789997 46899999999999999999999999999
Q ss_pred hCCCCcccccCcccccC---cccceEecccCCCCCCCCCCccccccccccCceeEEeeC-CCCceeEeeCCCCCCCCeEe
Q 025939 165 ALDLDADFFDKPEMLGQ---AIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWED 240 (246)
Q Consensus 165 ~Lgl~~~~~~~~~~~~~---~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~~~~~~~W~~ 240 (246)
+||+++++|. ..+.. +.+.||++|||+++.+ +..+|+++|||+|+||||+|+ +++||||+. +| +|++
T Consensus 193 ~Lgl~~~~f~--~~~~~~~~~~~~lRl~~YP~~p~~--~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~-~g----~W~~ 263 (362)
T PLN02393 193 NLGLEEDRLQ--NAFGGEDGVGACLRVNYYPKCPQP--DLTLGLSPHSDPGGMTILLPDDNVAGLQVRR-DD----AWIT 263 (362)
T ss_pred HcCCCHHHHH--HHhCCCccccceeeeeecCCCCCc--ccccccccccCCceEEEEeeCCCCCcceeeE-CC----EEEE
Confidence 9999999988 44433 3378999999998653 467899999999999999984 689999994 44 5999
Q ss_pred CCCCCC
Q 025939 241 VAPMKG 246 (246)
Q Consensus 241 V~p~~g 246 (246)
|+|+||
T Consensus 264 V~p~pg 269 (362)
T PLN02393 264 VKPVPD 269 (362)
T ss_pred CCCCCC
Confidence 999997
No 22
>PLN02904 oxidoreductase
Probab=100.00 E-value=8.1e-46 Score=322.65 Aligned_cols=209 Identities=25% Similarity=0.425 Sum_probs=167.4
Q ss_pred CCccceeeCCCc----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC--CCcccc
Q 025939 14 QTVLNCIDLSSP----DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE--KHRGYT 87 (246)
Q Consensus 14 ~~~iPvIDls~~----~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~GY~ 87 (246)
...||+|||+.. .+.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ...||.
T Consensus 49 ~~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g 128 (357)
T PLN02904 49 TITLPVIDLSLLHDPLLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYG 128 (357)
T ss_pred CCCCCEEECcccCCchhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCccccc
Confidence 368999999842 23567999999999999999999999999999999999999999999999986533 223442
Q ss_pred cCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 025939 88 PVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALD 167 (246)
Q Consensus 88 ~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 167 (246)
.+. ........++++.+.... .+.. ..+|.||. .+|+|++++.+|+++|.+|+.+||++|+++||
T Consensus 129 ---~~~-~~~~~~~~~~~d~~~~~~-----~p~~----~~~n~WP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 193 (357)
T PLN02904 129 ---TSL-NHSTDRVHYWRDFIKHYS-----HPLS----KWINLWPS--NPPCYKEKVGKYAEATHVLHKQLIEAISESLG 193 (357)
T ss_pred ---ccc-cccCCCCCCceEEeeecc-----CCcc----cccccCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 211 111122335666554321 1110 13689996 47899999999999999999999999999999
Q ss_pred CCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 168 LDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 168 l~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+++++|. ..+....+.||++|||||+.+ +..+|+++|||+|+||||+|+ .+||||+.++| +|++|+|+||
T Consensus 194 l~~~~f~--~~~~~~~~~lrl~~YPp~p~~--~~~~g~~~HtD~g~lTlL~qd-~~GLQV~~~~g----~Wi~V~p~pg 263 (357)
T PLN02904 194 LEKNYLQ--EEIEEGSQVMAVNCYPACPEP--EIALGMPPHSDFGSLTILLQS-SQGLQIMDCNK----NWVCVPYIEG 263 (357)
T ss_pred CCHHHHH--HHhcCcccEEEeeecCCCCCc--ccccCCcCccCCCceEEEecC-CCeeeEEeCCC----CEEECCCCCC
Confidence 9999998 556667789999999998753 468999999999999999997 59999998766 4999999997
No 23
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=3.7e-45 Score=313.65 Aligned_cols=213 Identities=34% Similarity=0.629 Sum_probs=175.7
Q ss_pred CCCCccceeeCCCcc-----hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC-CCcc
Q 025939 12 EAQTVLNCIDLSSPD-----IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE-KHRG 85 (246)
Q Consensus 12 ~~~~~iPvIDls~~~-----~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~G 85 (246)
....+||+|||+... +.+++++|.+||++||||+|+|||||.++++++.+.+++||+||.|+|+++.... ...|
T Consensus 13 ~~~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~g 92 (322)
T KOG0143|consen 13 TSELDIPVIDLSCLDSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRG 92 (322)
T ss_pred ccCCCcCeEECCCCCCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCccc
Confidence 456799999998322 4667899999999999999999999999999999999999999999999998876 5789
Q ss_pred cccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025939 86 YTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALA 165 (246)
Q Consensus 86 Y~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~ 165 (246)
|....... .....++.+.+.+... |. ....++.||+ .++.|++++++|.+++.+++.+|+++|+++
T Consensus 93 Y~~~~~~~----~~~~~~w~d~~~~~~~-----p~---~~~~~~~wp~--~p~~~re~~~eY~~~~~~L~~~l~~~l~es 158 (322)
T KOG0143|consen 93 YGTSFILS----PLKELDWRDYLTLLSA-----PE---SSFDPNLWPE--GPPEFRETMEEYAKEVMELSEKLLRLLSES 158 (322)
T ss_pred cccccccc----ccccccchhheeeecc-----Cc---cccCcccCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 97644321 1234577777776421 11 0135788997 678999999999999999999999999999
Q ss_pred CCCCcccccCcccccC-cccceEecccCCCCCCCCCCccccccccccCceeEEeeC-CCCceeEeeCCCCCCCCeEeCCC
Q 025939 166 LDLDADFFDKPEMLGQ-AIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAP 243 (246)
Q Consensus 166 Lgl~~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~~~~~~~W~~V~p 243 (246)
||++..++. ..++. ..+.||+++||||+.+ +.++|+++|||.|+||||.|| +++||||.+.+| +|++|+|
T Consensus 159 lgl~~~~~~--~~~~~~~~~~~r~n~Yp~cp~p--e~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg----~Wi~V~P 230 (322)
T KOG0143|consen 159 LGLEPEYLE--KLFGETGGQVMRLNYYPPCPEP--ELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDG----KWIDVPP 230 (322)
T ss_pred cCCChHHHH--HhhCCccceEEEEeecCCCcCc--cccccccCccCcCceEEEEccCCcCceEEEecCC----eEEECCC
Confidence 999865555 44555 4669999999998854 689999999999999999997 899999997333 6999999
Q ss_pred CCC
Q 025939 244 MKG 246 (246)
Q Consensus 244 ~~g 246 (246)
+||
T Consensus 231 ~p~ 233 (322)
T KOG0143|consen 231 IPG 233 (322)
T ss_pred CCC
Confidence 986
No 24
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=4e-45 Score=312.15 Aligned_cols=202 Identities=27% Similarity=0.428 Sum_probs=163.9
Q ss_pred CCCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCCCcccccCccc
Q 025939 13 AQTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPVLDE 92 (246)
Q Consensus 13 ~~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e 92 (246)
....||||||+... +.+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++......+||.+.+.+
T Consensus 2 ~~~~iPvIDls~~~--~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~GY~~~~~~ 79 (300)
T PLN02365 2 AEVNIPTIDLEEFP--GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAPSEV 79 (300)
T ss_pred CcCCCCEEEChhhH--HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCCCCCcCCC
Confidence 34579999998652 2368999999999999999999999999999999999999999999997665557899875422
Q ss_pred ccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc
Q 025939 93 LLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAP-DCLPGWRETMERFQREALEVAKAVARIIALALDL-DA 170 (246)
Q Consensus 93 ~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~-~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl-~~ 170 (246)
.+.+|.|.+..... +. ..+.||.. +..++|++.+++|+++|.+|+.+|+++|+.+||+ ++
T Consensus 80 ---------~~~~e~~~~~~~~~---~~------~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 141 (300)
T PLN02365 80 ---------NPLYEALGLYDMAS---PQ------AVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEG 141 (300)
T ss_pred ---------CCchhheecccccC---ch------hhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 36788887752100 10 11233321 1357899999999999999999999999999999 78
Q ss_pred ccccCcccccCcccceEecccCCCCCCCCCCccccccccccCceeEEeeCC-CCceeEeeC-CCCCCCCeEeCCCCCC
Q 025939 171 DFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDE-VAGLQICKD-RDAKPQLWEDVAPMKG 246 (246)
Q Consensus 171 ~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~-~~GLqv~~~-~~~~~~~W~~V~p~~g 246 (246)
++|. . ..+.||++|||+++. ++..+|+++|||+|+||||+||+ ++||||+++ +| +|++|+|+||
T Consensus 142 ~~f~--~----~~~~lr~~~YP~~p~--~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g----~Wi~V~p~pg 207 (300)
T PLN02365 142 DFFQ--G----WPSQFRINKYNFTPE--TVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSG----EFVPVDPLPG 207 (300)
T ss_pred HHHh--h----cccceeeeecCCCCC--ccccccccCccCCCceEEEecCCCcCceEEEECCCC----eEEecCCCCC
Confidence 8887 2 247899999999865 35678999999999999999984 999999987 44 5999999997
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=4.8e-44 Score=304.87 Aligned_cols=200 Identities=26% Similarity=0.418 Sum_probs=159.9
Q ss_pred ccceeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCCCcccccCccc
Q 025939 16 VLNCIDLSSP---DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPVLDE 92 (246)
Q Consensus 16 ~iPvIDls~~---~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e 92 (246)
+||+|||+.. .+.+++++|.+||++||||||+||||+.++++++++.++.||+||.|+|.. .. ....++...+
T Consensus 2 ~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~-~~-~~~~~~~~~~-- 77 (303)
T PLN02403 2 EIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFY-ES-EIAKALDNEG-- 77 (303)
T ss_pred CCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhh-cc-cccCcccccC--
Confidence 6999999843 245679999999999999999999999999999999999999999999862 11 1111221111
Q ss_pred ccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Q 025939 93 LLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDADF 172 (246)
Q Consensus 93 ~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~ 172 (246)
..+..|++|.|.++.. |. ...|.||+ .+|+|++++++|+++|.+++..|+++|+++||+++++
T Consensus 78 -----~~~~~d~kE~~~~~~~-----p~-----~~~~~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 140 (303)
T PLN02403 78 -----KTSDVDWESSFFIWHR-----PT-----SNINEIPN--LSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDY 140 (303)
T ss_pred -----CCCCccHhhhcccccC-----Cc-----cchhhCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1223689999998621 11 13588996 4689999999999999999999999999999999998
Q ss_pred ccCccccc---CcccceEecccCCCCCCCCCCccccccccccCceeEEeeC-CCCceeEeeCCCCCCCCeEeCCCCC
Q 025939 173 FDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMK 245 (246)
Q Consensus 173 ~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqv~~~~~~~~~~W~~V~p~~ 245 (246)
|. ..+. .+.+.||++|||+++. ++..+|+++|||+|+||||+|+ .++||||+. +| +|++|+|+|
T Consensus 141 f~--~~~~~~~~~~~~lrl~~YP~~~~--~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~-~g----~Wi~V~p~p 208 (303)
T PLN02403 141 IK--EAFSGNKGPSVGTKVAKYPECPR--PELVRGLREHTDAGGIILLLQDDQVPGLEFLK-DG----KWVPIPPSK 208 (303)
T ss_pred HH--HHhccCCCccceeeeEcCCCCCC--cccccCccCccCCCeEEEEEecCCCCceEecc-CC----eEEECCCCC
Confidence 87 4443 2345699999999864 3456789999999999999997 599999974 44 599999998
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=5.3e-34 Score=238.50 Aligned_cols=167 Identities=26% Similarity=0.410 Sum_probs=133.8
Q ss_pred HHHHHhHhhC-CCHHHHhhhccCC---CCcccccCcccccCCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCCC
Q 025939 59 VFSQSKRFFK-MPLNEKMKVLRNE---KHRGYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAP 134 (246)
Q Consensus 59 ~~~~~~~fF~-lp~e~K~~~~~~~---~~~GY~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~~ 134 (246)
+.+.+++||+ ||.|+|+++.... ..+||.....+. .......|++|.|.+... |.. ...+|.||.
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~--~~~~~~~d~kE~~~~~~~-----p~~---~~~~n~wP~- 69 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLG--AKDDTVLDWRDFFDHHTF-----PLS---RRNPSHWPD- 69 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccc--cCCCCccCchheeEeeec-----Ccc---ccchhhCCC-
Confidence 3578999997 9999999987653 368995433221 112234699999998521 110 124799997
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccCce
Q 025939 135 DCLPGWRETMERFQREALEVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLI 214 (246)
Q Consensus 135 ~~~~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~l 214 (246)
.++.|++++.+|+++|.+|+.+|+++|+++||+++++|. ..+.+..+.||++|||+++. ++..+|+++|||+|+|
T Consensus 70 -~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~~--~~~~~g~~~HtD~g~l 144 (262)
T PLN03001 70 -FPPDYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIE--DAVGDFYQNITVSYYPPCPQ--PELTLGLQSHSDFGAI 144 (262)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcchhheeecCCCCCC--cccccCCcCCcCCCee
Confidence 468999999999999999999999999999999999998 55566677899999999874 3578999999999999
Q ss_pred eEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 215 TLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 215 TiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
|||+||+++||||+.+ | +|++|+|+||
T Consensus 145 TlL~qd~v~GLqV~~~-g----~Wi~V~p~p~ 171 (262)
T PLN03001 145 TLLIQDDVEGLQLLKD-A----EWLMVPPISD 171 (262)
T ss_pred EEEEeCCCCceEEeeC-C----eEEECCCCCC
Confidence 9999999999999854 3 5999999987
No 27
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.94 E-value=2.3e-27 Score=175.64 Aligned_cols=113 Identities=45% Similarity=0.886 Sum_probs=93.0
Q ss_pred cceeeCCC--cchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCCCCcccccCccccc
Q 025939 17 LNCIDLSS--PDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPVLDELL 94 (246)
Q Consensus 17 iPvIDls~--~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e~~ 94 (246)
||||||+. ..+.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.+...++||.+.+.+..
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~~~~ 80 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARSPSYRGYSPPGSEST 80 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCCTTCSEEEESEEECC
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCCCCCcccccCCcccc
Confidence 79999983 3357789999999999999999999999999999999999999999999999977778999999988775
Q ss_pred CCCCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCCCC
Q 025939 95 DPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPA 133 (246)
Q Consensus 95 ~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~~P~ 133 (246)
.. +..|++|+|.++.+.+.++|. ...++.+|.||+
T Consensus 81 ~~---~~~d~~E~~~~~~~~~~~~p~-~~~~~~~n~WP~ 115 (116)
T PF14226_consen 81 DG---GKPDWKESFNIGPDLPEDDPA-YPPLYGPNIWPD 115 (116)
T ss_dssp TT---CCCCSEEEEEEECC-STTCHH-TGCTS-GGGS-T
T ss_pred CC---CCCCceEEeEEECCCCccccc-cccccCCCCCCC
Confidence 43 468999999999775555443 345678999996
No 28
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.77 E-value=1.8e-18 Score=127.95 Aligned_cols=74 Identities=23% Similarity=0.495 Sum_probs=64.1
Q ss_pred CccceeeCCCc-----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCHHHHhhhccCC-CCccccc
Q 025939 15 TVLNCIDLSSP-----DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNE-KHRGYTP 88 (246)
Q Consensus 15 ~~iPvIDls~~-----~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~ 88 (246)
.+||+|||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.++|+++.... ...||..
T Consensus 36 ~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~~~~~gy~~ 115 (120)
T PLN03176 36 NEIPVISIAGIDDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSGGKKGGFIV 115 (120)
T ss_pred CCCCeEECccccCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCCCccCCcch
Confidence 47999999842 23457899999999999999999999999999999999999999999999986654 3668843
No 29
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.11 E-value=7.8e-11 Score=84.21 Aligned_cols=53 Identities=45% Similarity=0.734 Sum_probs=40.8
Q ss_pred cceEecccCCCCCCCCCCcccccccccc--CceeEEeeCCCCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 184 ATLRLLHYEGQISDPSKGMYGAGAHSDY--GLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 184 ~~lr~~~Yp~~~~~~~~~~~~~~~HtD~--g~lTiL~qd~~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
+.+|+++||+ +....++++|+|. +++|+|+|++++||||+..+ .|+.|++.++
T Consensus 2 ~~~~~~~Y~~-----~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~-----~~~~v~~~~~ 56 (98)
T PF03171_consen 2 SQLRLNRYPP-----PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDG-----EWVDVPPPPG 56 (98)
T ss_dssp -EEEEEEE-S-----CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETT-----EEEE----TT
T ss_pred CEEEEEECCC-----cccCCceeCCCcCCCCeEEEEecccchheeccccc-----cccCccCccc
Confidence 5699999998 2457899999999 99999999889999999986 5999999875
No 30
>PRK08130 putative aldolase; Validated
Probab=84.50 E-value=1.4 Score=35.74 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=32.5
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..||+|++..+...++++.+.+++++...+.|.|||+
T Consensus 126 g~i~v~~y~~~g~~~la~~~~~~l~~~~~vll~nHGv 162 (213)
T PRK08130 126 GHVPLIPYYRPGDPAIAEALAGLAARYRAVLLANHGP 162 (213)
T ss_pred CccceECCCCCChHHHHHHHHHHhccCCEEEEcCCCC
Confidence 4689999977766788899999999999999999996
No 31
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=83.44 E-value=1.6 Score=34.56 Aligned_cols=37 Identities=11% Similarity=0.159 Sum_probs=32.1
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..+|++++..+...++++.+.+++++...+.|.|||+
T Consensus 119 ~~v~v~~~~~~g~~~la~~~~~~l~~~~~vll~nHGv 155 (184)
T PRK08333 119 KKIPILPFRPAGSVELAEQVAEAMKEYDAVIMERHGI 155 (184)
T ss_pred CCEeeecCCCCCcHHHHHHHHHHhccCCEEEEcCCCC
Confidence 4799999976666788899999999999999999996
No 32
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=78.94 E-value=2.7 Score=34.35 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=31.9
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.+|++++..+...++++.+.+++.+...+.|.|||+
T Consensus 127 ~v~~~~y~~~gs~ela~~v~~~l~~~~~vlL~nHGv 162 (217)
T PRK05874 127 DVRCTEYAASGTPEVGRNAVRALEGRAAALIANHGL 162 (217)
T ss_pred ceeeecCCCCCcHHHHHHHHHHhCcCCEEEEcCCCC
Confidence 588999886666788999999999999999999996
No 33
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=78.20 E-value=1.7 Score=38.90 Aligned_cols=54 Identities=11% Similarity=0.082 Sum_probs=37.6
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKM 69 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~l 69 (246)
.-||.||+++.......+++.+.+++.|++.|.|. ||.+......+..++|...
T Consensus 48 ~~IP~i~f~di~~~~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~~ 101 (416)
T PF07350_consen 48 SIIPEIDFADIENGGVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLKA 101 (416)
T ss_dssp -SS-EEEHHHHHCT---HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHHH
T ss_pred CCCceeeHHHHhCCCCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHHh
Confidence 47999999866554456788899999999999885 6777777777777766543
No 34
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=75.32 E-value=15 Score=28.56 Aligned_cols=75 Identities=23% Similarity=0.161 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhCCCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccC--------ceeEEee--C--C
Q 025939 154 VAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG--------LITLLAT--D--E 221 (246)
Q Consensus 154 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g--------~lTiL~q--d--~ 221 (246)
+...|.+.+...++++... ......+++.+|.+.. ...+|.|.. .+|+++. + .
T Consensus 60 ~~~~l~~~i~~~~~~~~~~-------~~~~~~~~~~~Y~~g~--------~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~ 124 (178)
T smart00702 60 VIERIRQRLADFLGLLRGL-------PLSAEDAQVARYGPGG--------HYGPHVDNFEDDENGDRIATFLLYLNDVEE 124 (178)
T ss_pred HHHHHHHHHHHHHCCCchh-------hccCcceEEEEECCCC--------cccCcCCCCCCCCCCCeEEEEEEEeccCCc
Confidence 3444555555556654210 1223448899998732 256799966 6888876 2 2
Q ss_pred CCceeEeeCCCCCCCCeEeCCCCCC
Q 025939 222 VAGLQICKDRDAKPQLWEDVAPMKG 246 (246)
Q Consensus 222 ~~GLqv~~~~~~~~~~W~~V~p~~g 246 (246)
.|.|.+...+.. .-..|.|.+|
T Consensus 125 GG~~~f~~~~~~---~~~~v~P~~G 146 (178)
T smart00702 125 GGELVFPGLGLM---VCATVKPKKG 146 (178)
T ss_pred CceEEecCCCCc---cceEEeCCCC
Confidence 344555443311 2345555544
No 35
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=74.29 E-value=4.3 Score=33.00 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=31.2
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..||++.+..+...++++.+.+++.+...+.|.|||+
T Consensus 123 ~~i~~~~y~~~gs~~la~~v~~~l~~~~~vll~nHGv 159 (214)
T PRK06833 123 PNVRCAEYATFGTKELAENAFEAMEDRRAVLLANHGL 159 (214)
T ss_pred CCeeeccCCCCChHHHHHHHHHHhCcCCEEEECCCCC
Confidence 3688888876666778888999999999999999996
No 36
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=72.62 E-value=2.5 Score=33.28 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=30.9
Q ss_pred CccceeeCCCcchHHHHHHHHHHHH-hcceEEEEcCCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQACL-DCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~-~~Gff~l~~hgi 51 (246)
..+|+|++..+...++.+.|.++++ +...+.+.|||+
T Consensus 122 ~~v~~~~~~~~~~~~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPPGSEELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THSTTCHHHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeeccccccchhhhhhhhhhhcCCceEEeecCCce
Confidence 6799999977655667889999999 889999999995
No 37
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=71.68 E-value=6 Score=31.18 Aligned_cols=36 Identities=11% Similarity=0.017 Sum_probs=29.7
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..||++ +..+...++++.+.+++.+.-.+.|.|||+
T Consensus 114 ~~ipv~-~~~~~~~~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 114 GTIPVV-GGDIGSGELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CCEeEE-eCCCCCHHHHHHHHHHHhhCCEEEEcCCCc
Confidence 368988 555555677889999999999999999996
No 38
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=71.12 E-value=5.8 Score=32.27 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=30.9
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.+|++.+..+...++++.+.+++.+...+.|.|||+
T Consensus 122 ~v~~~~y~~~gs~~la~~~~~~l~~~~~vLl~nHGv 157 (215)
T PRK08087 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_pred CceeecCCCCCCHHHHHHHHHHhCcCCEEEecCCCC
Confidence 588998876666778889999999999999999996
No 39
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=70.21 E-value=6.9 Score=34.59 Aligned_cols=52 Identities=15% Similarity=-0.051 Sum_probs=38.4
Q ss_pred CCccceeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhC
Q 025939 14 QTVLNCIDLSSPD-IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFK 68 (246)
Q Consensus 14 ~~~iPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 68 (246)
.+++|.||++... ..+.+.++.+++.++|++.|.+-+++.+. +.+.++.|-.
T Consensus 107 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G~ 159 (366)
T TIGR02409 107 ELSLPKFDHEAVMKDDSVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIGF 159 (366)
T ss_pred cccCCceeHHHHhCCHHHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhcc
Confidence 4678999997432 45567889999999999999999887643 4455555543
No 40
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=69.10 E-value=6.3 Score=33.42 Aligned_cols=36 Identities=8% Similarity=0.107 Sum_probs=31.2
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||++.+..+...++++.+.+++++...+.|.|||+
T Consensus 179 ~i~vvpy~~pgs~eLa~~v~~~l~~~~avLL~nHGv 214 (274)
T PRK03634 179 GVGIVPWMVPGTDEIGQATAEKMQKHDLVLWPKHGV 214 (274)
T ss_pred ceeEecCCCCCCHHHHHHHHHHhccCCEEEEcCCCC
Confidence 588998876666778889999999999999999996
No 41
>PRK06755 hypothetical protein; Validated
Probab=69.00 E-value=5.6 Score=32.31 Aligned_cols=36 Identities=11% Similarity=0.029 Sum_probs=29.1
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||+|.+..+...++++.+.+++++...+.|.|||+
T Consensus 136 ~IPiv~~~~~~~~~la~~~~~~~~~~~avLl~~HGv 171 (209)
T PRK06755 136 TIPIVEDEKKFADLLENNVPNFIEGGGVVLVHNYGM 171 (209)
T ss_pred EEEEEeCCCchhHHHHHHHHhhccCCCEEEEcCCCe
Confidence 699999876555666777778888888999999996
No 42
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=67.71 E-value=8 Score=32.74 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=31.7
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||++.+..+...++++.+.+++++...+.|.|||+
T Consensus 177 ~i~vvp~~~pGs~eLA~~v~~~l~~~~avLL~nHGv 212 (270)
T TIGR02624 177 GVGIIPWMVPGTNEIGEATAEKMKEHRLVLWPHHGI 212 (270)
T ss_pred ccccccCcCCCCHHHHHHHHHHhccCCEEEEcCCCC
Confidence 488888877777788999999999999999999996
No 43
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=64.72 E-value=8.2 Score=31.35 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=30.0
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||+|.+..+...++++.+.+++.+...+.|.|||+
T Consensus 121 ~i~~v~y~~~gs~~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 121 NIPCVPYATFGSTKLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred CccccCCCCCChHHHHHHHHHHhhhCCEEehhcCCC
Confidence 478888876666677888888989999999999996
No 44
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=64.33 E-value=7.7 Score=31.65 Aligned_cols=37 Identities=8% Similarity=-0.054 Sum_probs=30.5
Q ss_pred CccceeeCCCcchHHHHHHHHHHH--HhcceEEEEcCCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQAC--LDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~--~~~Gff~l~~hgi 51 (246)
..||++.+..+...++++++.+++ .+...+.|.|||+
T Consensus 129 ~~ip~~~y~~~g~~ela~~i~~~l~~~~~~~vll~nHG~ 167 (221)
T PRK06557 129 GPIPVGPFALIGDEAIGKGIVETLKGGRSPAVLMQNHGV 167 (221)
T ss_pred CCeeccCCcCCCcHHHHHHHHHHhCcCCCCEEEECCCCc
Confidence 468888887655567788889999 7888999999996
No 45
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=64.06 E-value=14 Score=31.17 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=38.7
Q ss_pred CccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCC
Q 025939 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKM 69 (246)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~l 69 (246)
++|.=|||+..-..+..++|.+++.++|++.+.+..++. +...+.++.|-.+
T Consensus 14 aev~g~dl~~~l~~~~~~~l~~~l~~~Gvlvfr~q~l~~---~~~~~~~~~~G~~ 65 (277)
T PRK09553 14 AQISGIDLTRPLSDNQFEQLYHALLRHQVLFFRDQPITP---QQQRDLAARFGDL 65 (277)
T ss_pred eEEeCcccCCcCCHHHHHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhCCC
Confidence 556667787543445678999999999999999999874 4556666676554
No 46
>PRK06357 hypothetical protein; Provisional
Probab=61.09 E-value=14 Score=30.21 Aligned_cols=36 Identities=11% Similarity=0.337 Sum_probs=27.8
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhc------ceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDC------GFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~------Gff~l~~hgi 51 (246)
.+|++.+..+...++++.+.+++++. ..+.|.|||+
T Consensus 130 ~i~~~p~~~~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGv 171 (216)
T PRK06357 130 KIPTLPFAPATSPELAEIVRKHLIELGDKAVPSAFLLNSHGI 171 (216)
T ss_pred CcceecccCCCcHHHHHHHHHHHhhcCcccCCCEEEECCCCC
Confidence 57888887555567788888888764 5899999996
No 47
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=59.99 E-value=13 Score=29.55 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=28.1
Q ss_pred ccceeeCCCcchHHHHHHHHHHHH---hcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACL---DCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~---~~Gff~l~~hgi 51 (246)
.||++.. .+...++++.+.++++ +...+.|.|||+
T Consensus 126 ~vp~~~~-~~gs~ela~~~~~~l~~~~~~~avll~nHGv 163 (193)
T TIGR03328 126 TIPIFEN-TQDIARLADSVAPYLEAYPDVPGVLIRGHGL 163 (193)
T ss_pred EEeeecC-CCChHHHHHHHHHHHhcCCCCCEEEEcCCcc
Confidence 5899986 4555678888989986 478999999996
No 48
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=58.26 E-value=5.9 Score=27.52 Aligned_cols=37 Identities=27% Similarity=0.279 Sum_probs=22.4
Q ss_pred eEecccCCCCCCCCCCcccccccccc-----CceeEEee--CC-----CCceeEeeC
Q 025939 186 LRLLHYEGQISDPSKGMYGAGAHSDY-----GLITLLAT--DE-----VAGLQICKD 230 (246)
Q Consensus 186 lr~~~Yp~~~~~~~~~~~~~~~HtD~-----g~lTiL~q--d~-----~~GLqv~~~ 230 (246)
+++++|++. -.+.+|+|. ..+|+|+. +. .|.|++.+.
T Consensus 1 ~~~~~y~~G--------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~ 49 (100)
T PF13640_consen 1 MQLNRYPPG--------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPS 49 (100)
T ss_dssp -EEEEEETT--------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTT
T ss_pred CEEEEECcC--------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEecc
Confidence 467777652 246899998 68888854 22 366777653
No 49
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=57.69 E-value=8.8 Score=30.96 Aligned_cols=37 Identities=14% Similarity=0.198 Sum_probs=29.8
Q ss_pred CccceeeCCCc--chHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 15 TVLNCIDLSSP--DIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 15 ~~iPvIDls~~--~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
..||++++..+ ...+.++.+.+++.+.-.+.|.|||+
T Consensus 121 ~~ip~~~~~~~~~~~~~la~~~~~~l~~~~~vll~nHG~ 159 (209)
T cd00398 121 GDIPCTPYMTPETGEDEIGTQRALGFPNSKAVLLRNHGL 159 (209)
T ss_pred CCeeecCCcCCCccHHHHHHHHhcCCCcCCEEEEcCCCC
Confidence 57999999876 45566777777888888999999996
No 50
>PRK07490 hypothetical protein; Provisional
Probab=52.70 E-value=17 Score=30.22 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=29.0
Q ss_pred cccee-eCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCI-DLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvI-Dls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.+|++ ++..+...++++.+.+++.+.-.+.|.|||+
T Consensus 133 ~v~~~~~y~~~~~~ela~~v~~~l~~~~avlL~nHG~ 169 (245)
T PRK07490 133 RVAVDTLYGGMALEEEGERLAGLLGDKRRLLMGNHGV 169 (245)
T ss_pred CeeeccCCCCcCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 57775 5665545677889999999999999999996
No 51
>PRK06661 hypothetical protein; Provisional
Probab=51.29 E-value=18 Score=29.79 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=28.2
Q ss_pred ccceeeCCCcch--HHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDI--QQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~--~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||..++.+... .+..+.+.+++.+...+.|.|||+
T Consensus 123 ~i~~~~~~~~~~~~~~~~~~~a~~l~~~~avll~nHG~ 160 (231)
T PRK06661 123 RISYHNYNSLALDADKQSSRLVNDLKQNYVMLLRNHGA 160 (231)
T ss_pred CceecCCCccccCchhHHHHHHHHhCCCCEEEECCCCC
Confidence 467777664432 566888999999999999999996
No 52
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=50.14 E-value=15 Score=24.72 Aligned_cols=20 Identities=25% Similarity=0.574 Sum_probs=16.8
Q ss_pred HHHHHHHHhcceEEEEcCCC
Q 025939 32 SLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 32 ~~l~~A~~~~Gff~l~~hgi 51 (246)
+.|.+.|-+.||+||.-|-+
T Consensus 36 ~~if~eCVeqGFiYVs~~~~ 55 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWM 55 (89)
T ss_pred cHHHHHHHhcceEEEEeeee
Confidence 56889999999999977654
No 53
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=48.15 E-value=89 Score=27.06 Aligned_cols=46 Identities=24% Similarity=0.232 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCCcccccCcccccCcccceEecccCCCCCCCCCCccccccccccC------------ceeEEee
Q 025939 156 KAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG------------LITLLAT 219 (246)
Q Consensus 156 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g------------~lTiL~q 219 (246)
..|.+.|+...+++.+..+ .|++++|-+... ..+|.|+. +.|+|+.
T Consensus 114 ~~I~~Ria~~t~lp~~~~E----------~lQVlrY~~Gq~--------Y~~H~D~~~~~~~~~~gg~R~aTvL~Y 171 (310)
T PLN00052 114 SRIEERIAAWTFLPEENAE----------NIQILRYEHGQK--------YEPHFDYFHDKINQALGGHRYATVLMY 171 (310)
T ss_pred HHHHHHHHHHhCCCcccCc----------ceEEEecCCCCC--------CCCCCCccccccccccCCceeEEEEEE
Confidence 3444444455566654332 378888886432 35666642 5788876
No 54
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=47.29 E-value=23 Score=28.62 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=27.2
Q ss_pred ccceeeCCCcchHHHHHHHHHHHH-hcceEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACL-DCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~-~~Gff~l~~hgi 51 (246)
.||+++.-. ...++++.+.++++ +...+.|.|||+
T Consensus 137 ~vpv~~~~~-~~~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 137 HIPIIENHA-DIPTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred EEEEecCCC-CHHHHHHHHHHHhccCCcEEEECCCce
Confidence 588886322 24678889999998 888999999996
No 55
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=43.91 E-value=36 Score=30.06 Aligned_cols=51 Identities=14% Similarity=0.183 Sum_probs=35.8
Q ss_pred CccceeeCCCc-c-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhC
Q 025939 15 TVLNCIDLSSP-D-IQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFK 68 (246)
Q Consensus 15 ~~iPvIDls~~-~-~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 68 (246)
..+|.+|+... . ..+.+.++.+++.++|+..|.+.+++.+. ..+.++.|..
T Consensus 99 ~~~~~~~~~~~~~~~d~~l~~~l~~l~~~G~v~~~g~~~~~~~---~~~~a~riG~ 151 (362)
T TIGR02410 99 LKDPSVHFKTTYDHTDSTLKSFSKNIYKYGFTFVDNVPVTPEA---TEKLCERISI 151 (362)
T ss_pred ccCCceeHHHHhccCHHHHHHHHHHHHhhCEEEEcCCCCCHHH---HHHHHHHhcc
Confidence 44688887632 1 14568899999999999999999987654 3444555533
No 56
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=42.89 E-value=39 Score=20.63 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCC
Q 025939 29 QSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMP 70 (246)
Q Consensus 29 ~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp 70 (246)
+.+..|...|...||......|+-......+++.-+..+.|+
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 346788999999999966566776677777777777777775
No 57
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=42.77 E-value=22 Score=22.40 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=23.0
Q ss_pred cccccccccC---ceeEEe-------eCCCCceeEeeCCCCCCCCeEeCCC
Q 025939 203 YGAGAHSDYG---LITLLA-------TDEVAGLQICKDRDAKPQLWEDVAP 243 (246)
Q Consensus 203 ~~~~~HtD~g---~lTiL~-------qd~~~GLqv~~~~~~~~~~W~~V~p 243 (246)
-|.-+-+|-- -||+|- |--+.-|||+-.+|. |.+|+-
T Consensus 16 nG~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGp----Wqdikg 62 (64)
T PF06820_consen 16 NGWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGP----WQDIKG 62 (64)
T ss_pred CccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCC----hhhccC
Confidence 3445566633 355561 212467999998875 999863
No 58
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=41.91 E-value=72 Score=26.93 Aligned_cols=44 Identities=20% Similarity=0.365 Sum_probs=34.3
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHHhH
Q 025939 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQSKR 65 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~~~ 65 (246)
+|||+.++ ...++.+-|.+.|.-.|++. |++.+.++.+-++++.
T Consensus 73 ~IDFT~P~---~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 73 LIDFTTPE---ATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred EEECCCch---hhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 57887763 45667788899998777755 9999988888887766
No 59
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=39.90 E-value=52 Score=28.11 Aligned_cols=28 Identities=18% Similarity=0.351 Sum_probs=23.4
Q ss_pred HHHHHhcceEEEEcCCCCHHHHHHHHHHHh
Q 025939 35 KQACLDCGFFYVVNHGISQEFMEEVFSQSK 64 (246)
Q Consensus 35 ~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~ 64 (246)
.+++.+.|||.|.| +|..++..+.+...
T Consensus 18 l~~lED~Gy~cvDN--lP~~Ll~~l~~~~~ 45 (284)
T PF03668_consen 18 LRALEDLGYYCVDN--LPPSLLPQLIELLA 45 (284)
T ss_pred HHHHHhcCeeEEcC--CcHHHHHHHHHHHH
Confidence 58999999999999 77788888777655
No 60
>PRK05834 hypothetical protein; Provisional
Probab=35.28 E-value=54 Score=26.21 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=25.8
Q ss_pred ccceeeCCCcch--HHHHHHHHHHHHhcc--eEEEEcCCC
Q 025939 16 VLNCIDLSSPDI--QQSVSLLKQACLDCG--FFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~--~~~~~~l~~A~~~~G--ff~l~~hgi 51 (246)
.||++.+..+.. ....+.+.+++++.. .+.|.|||+
T Consensus 121 ~ipv~~~~~~~~~~~~la~~v~~~l~~~~~~avLL~nHGv 160 (194)
T PRK05834 121 EISIYDPKDFDDWYERADTEILRYLQEKNKNFVVIKGYGV 160 (194)
T ss_pred eeeecCccccchHHHhHHHHHHHHHhhcCCCEEEEcCCcc
Confidence 488887654432 234677888888755 999999996
No 61
>PRK07044 aldolase II superfamily protein; Provisional
Probab=34.84 E-value=51 Score=27.49 Aligned_cols=36 Identities=19% Similarity=0.061 Sum_probs=27.8
Q ss_pred ccceeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCIDLSSPD-IQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.||++++..+. ..+..+.+.+++.+...+.|.|||+
T Consensus 138 ~i~~~~y~~~~~~~e~~~~va~~l~~~~avLL~nHGv 174 (252)
T PRK07044 138 RLAYHDYEGIALDLDEGERLVADLGDKPAMLLRNHGL 174 (252)
T ss_pred CceeeCCCCCcCCHHHHHHHHHHhccCCEEEECCCCc
Confidence 57888775332 3455788888999999999999996
No 62
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=33.82 E-value=80 Score=25.89 Aligned_cols=49 Identities=18% Similarity=0.198 Sum_probs=30.6
Q ss_pred CCccc-eeeCCCcchHHHHHHHHHHHHhcce---EEEEcCCCCHHHHHHHHHH
Q 025939 14 QTVLN-CIDLSSPDIQQSVSLLKQACLDCGF---FYVVNHGISQEFMEEVFSQ 62 (246)
Q Consensus 14 ~~~iP-vIDls~~~~~~~~~~l~~A~~~~Gf---f~l~~hgi~~~~~~~~~~~ 62 (246)
....| +|.++...-.+.+..+.+++.++|| +.|.+||=....++.+.+.
T Consensus 70 h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~~ 122 (237)
T PF02633_consen 70 HMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAARE 122 (237)
T ss_dssp CTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHHH
T ss_pred cCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHHH
Confidence 34556 7777655456778999999999997 4456888654444444443
No 63
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=32.59 E-value=35 Score=19.62 Aligned_cols=20 Identities=35% Similarity=0.466 Sum_probs=14.6
Q ss_pred cccCceeEEeeCCCCceeEee
Q 025939 209 SDYGLITLLATDEVAGLQICK 229 (246)
Q Consensus 209 tD~g~lTiL~qd~~~GLqv~~ 229 (246)
-.+|++||..||+. =.||..
T Consensus 13 i~yGsV~iiiqdG~-vvQIe~ 32 (38)
T PF10055_consen 13 IRYGSVTIIIQDGR-VVQIEK 32 (38)
T ss_pred CCcceEEEEEECCE-EEEEEh
Confidence 46899999999863 256543
No 64
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=32.52 E-value=1.9e+02 Score=23.80 Aligned_cols=9 Identities=33% Similarity=0.449 Sum_probs=6.8
Q ss_pred eEecccCCC
Q 025939 186 LRLLHYEGQ 194 (246)
Q Consensus 186 lr~~~Yp~~ 194 (246)
.++++|.+.
T Consensus 82 ~~f~rY~~G 90 (226)
T PRK05467 82 PLFNRYEGG 90 (226)
T ss_pred ceEEEECCC
Confidence 678888864
No 65
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=31.94 E-value=68 Score=25.76 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=25.6
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcc---eEEEEcCCC
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCG---FFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~G---ff~l~~hgi 51 (246)
.||++.- .....++++.+.+++++.. .+.|.|||+
T Consensus 134 ~vp~~~~-~~~~~eLa~~v~~~l~~~~~~~avlL~nHGv 171 (204)
T PRK09220 134 VVPIFDN-DQDIARLAARVAPYLDAQPLRYGYLIRGHGL 171 (204)
T ss_pred EEeeecC-CCCHHHHHHHHHHHHHhCCCCcEEEECCCce
Confidence 5666553 2234677888999998865 899999996
No 66
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=31.88 E-value=86 Score=25.49 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHh
Q 025939 29 QSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRF 66 (246)
Q Consensus 29 ~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~f 66 (246)
+.+++|.+++.++||+.|.+..++.+.. .+.++.|
T Consensus 24 ~~~~~~~~~l~~~G~vvlrg~~~~~~~~---~~~~~~~ 58 (258)
T PF02668_consen 24 EELEELREALAEYGFVVLRGFPLDPEQF---EALASRL 58 (258)
T ss_dssp CHHHHHHHHHHHHSEEEEESCTSSHHHH---HHHHHHH
T ss_pred HHHHHHHHHHhcccEEEEcCCCCCHHHH---HHHHHhh
Confidence 4688999999999999999888755443 3444444
No 67
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=31.86 E-value=73 Score=26.17 Aligned_cols=36 Identities=11% Similarity=0.041 Sum_probs=25.7
Q ss_pred ccceeeCCCc------chHHHHHHHHHHHHhc-------ceEEEEcCCC
Q 025939 16 VLNCIDLSSP------DIQQSVSLLKQACLDC-------GFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls~~------~~~~~~~~l~~A~~~~-------Gff~l~~hgi 51 (246)
.||++++..+ ...+..+.+.+++.+. ..+.|.|||+
T Consensus 124 ~ip~~~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~ 172 (231)
T PRK08193 124 DIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGP 172 (231)
T ss_pred CcceecCCCcccccccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCc
Confidence 6898886432 1235677888888764 5789999996
No 68
>TIGR01573 cas2 CRISPR-associated endoribonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. It is an endoribonuclease, capable of cleaving single-stranded RNA. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead.
Probab=31.60 E-value=1.4e+02 Score=20.66 Aligned_cols=49 Identities=12% Similarity=0.165 Sum_probs=31.9
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEcC----CCCHHHHH-HHHHHHhHhh
Q 025939 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNH----GISQEFME-EVFSQSKRFF 67 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~h----gi~~~~~~-~~~~~~~~fF 67 (246)
+-|++....+....++.+.|.++||+.+-.. -++..... .+.+......
T Consensus 6 ~YDI~~~~~~k~r~kv~k~L~~~G~~rvQ~SVf~~~~~~~~~~~~l~~~l~~~i 59 (95)
T TIGR01573 6 VYDIPTDGERKRRRKLRKLLEKYGLQRVQYSVFEGILEPNQLARKLIERLKRII 59 (95)
T ss_pred EEECCCCchHHHHHHHHHHHHHcchhheeccEEEEEcCHHHHHHHHHHHHHHhC
Confidence 3467654334557899999999999988755 24555555 5666555543
No 69
>PLN02452 phosphoserine transaminase
Probab=30.89 E-value=91 Score=27.58 Aligned_cols=51 Identities=12% Similarity=0.123 Sum_probs=38.9
Q ss_pred ccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCC------------CCHHHHHHHHHHHhHhh
Q 025939 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHG------------ISQEFMEEVFSQSKRFF 67 (246)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hg------------i~~~~~~~~~~~~~~fF 67 (246)
+.++|.+.-++. +..+++.+.|++.||+.+.+|+ ++.+.++.+.+.+++|=
T Consensus 299 s~~~vsF~~~~~-~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~ 361 (365)
T PLN02452 299 SLMNVPFTLGGS-ELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 361 (365)
T ss_pred CCeEEEEEcCCc-hhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHH
Confidence 455666654333 3678999999999999999994 56777888888888873
No 70
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=30.55 E-value=1e+02 Score=22.43 Aligned_cols=44 Identities=27% Similarity=0.394 Sum_probs=30.3
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHHHhH
Q 025939 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVN-HGISQEFMEEVFSQSKR 65 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~-hgi~~~~~~~~~~~~~~ 65 (246)
+||++.+ +.+....+.|.+.|.=.|++ .|.+.+.++.+.++++.
T Consensus 71 vIDfT~p---~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 71 VIDFTNP---DAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp EEEES-H---HHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred EEEcCCh---HHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 5677744 34566677778889999985 48988877777776554
No 71
>PF08823 PG_binding_2: Putative peptidoglycan binding domain; InterPro: IPR014927 This entry may be a peptidoglycan binding domain.
Probab=30.33 E-value=87 Score=20.84 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHH
Q 025939 28 QQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFS 61 (246)
Q Consensus 28 ~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~ 61 (246)
.++++.|..++++.||..=..+|.-.+-.++++.
T Consensus 15 ~~~~~evq~~L~~lGyy~g~~~g~~d~a~~~Al~ 48 (74)
T PF08823_consen 15 GDVAREVQEALKRLGYYKGEADGVWDEATEDALR 48 (74)
T ss_pred HHHHHHHHHHHHHcCCccCCCCCcccHHHHHHHH
Confidence 5678999999999999777777776554554444
No 72
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=29.80 E-value=1.8e+02 Score=24.43 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHhcce---EEEEcCCCCHHHHHHHHHHHhHhhC
Q 025939 27 IQQSVSLLKQACLDCGF---FYVVNHGISQEFMEEVFSQSKRFFK 68 (246)
Q Consensus 27 ~~~~~~~l~~A~~~~Gf---f~l~~hgi~~~~~~~~~~~~~~fF~ 68 (246)
-......+.+++..+|| ..|.+||=....++.+.+..+.-|.
T Consensus 88 ~~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~ 132 (250)
T COG1402 88 LIALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAELG 132 (250)
T ss_pred HHHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhcc
Confidence 35668889999999999 4455788666656666655555443
No 73
>PRK06486 hypothetical protein; Provisional
Probab=28.76 E-value=67 Score=27.01 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=26.8
Q ss_pred ccceee-CCC-cchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 16 VLNCID-LSS-PDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvID-ls~-~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
.+|++. +.. ....++++.+.+++.+...+.|.|||+
T Consensus 148 ~i~~~~~~~~~~~s~ela~~va~al~~~~avLL~nHG~ 185 (262)
T PRK06486 148 RTAVDEDYNGLALDAAEGDRIARAMGDADIVFLKNHGV 185 (262)
T ss_pred CeeeccCCCCccCchhHHHHHHHHhCcCCEEEECCCCC
Confidence 466664 422 223567889999999999999999996
No 74
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=27.13 E-value=82 Score=24.21 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=23.6
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
+|.|..+........|.++|+++||-.+.+...
T Consensus 54 t~~l~q~~~D~Fg~aL~~aLR~~GYaV~e~~~~ 86 (151)
T PRK13883 54 RFELQQPTPDAFGQALVKALRDKGYALLEYNPA 86 (151)
T ss_pred EEEEecCCCcHHHHHHHHHHHHcCeEEEecCCc
Confidence 455544333456788899999999999986554
No 75
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=26.34 E-value=71 Score=21.84 Aligned_cols=57 Identities=21% Similarity=0.255 Sum_probs=38.6
Q ss_pred CccceeeCCCc--chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCCCH
Q 025939 15 TVLNCIDLSSP--DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPL 71 (246)
Q Consensus 15 ~~iPvIDls~~--~~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~ 71 (246)
.++=+||+..+ +..+.+++|.+.+.+..++.+..+.-+....+.+...+..|+..|.
T Consensus 44 ~d~iiid~~~~~~~~~~~~~~i~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kp~ 102 (112)
T PF00072_consen 44 PDLIIIDLELPDGDGLELLEQIRQINPSIPIIVVTDEDDSDEVQEALRAGADDYLSKPF 102 (112)
T ss_dssp ESEEEEESSSSSSBHHHHHHHHHHHTTTSEEEEEESSTSHHHHHHHHHTTESEEEESSS
T ss_pred ceEEEEEeeeccccccccccccccccccccEEEecCCCCHHHHHHHHHCCCCEEEECCC
Confidence 56778888643 3367789998888788888888777655545555444555666654
No 76
>PRK15331 chaperone protein SicA; Provisional
Probab=26.30 E-value=69 Score=24.98 Aligned_cols=41 Identities=20% Similarity=0.444 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHhHhhCC
Q 025939 28 QQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKM 69 (246)
Q Consensus 28 ~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~l 69 (246)
.+..+.|.+|+.+ |--.-.-+||+++.++.++..+..||..
T Consensus 10 ~~~~~~i~~al~~-G~tlk~l~gis~~~le~iY~~Ay~~y~~ 50 (165)
T PRK15331 10 ERVAEMIWDAVSE-GATLKDVHGIPQDMMDGLYAHAYEFYNQ 50 (165)
T ss_pred HHHHHHHHHHHHC-CCCHHHHhCCCHHHHHHHHHHHHHHHHC
Confidence 4567788888877 5333447899999999999999999985
No 77
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=25.99 E-value=1.5e+02 Score=25.15 Aligned_cols=39 Identities=23% Similarity=0.359 Sum_probs=28.1
Q ss_pred ceeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHH
Q 025939 18 NCIDLSSPDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEV 59 (246)
Q Consensus 18 PvIDls~~~~~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~ 59 (246)
=+|||+.++ .+.+..+.|.+.|.-.|++. |.+.+.++.+
T Consensus 72 VvIDFT~P~---~~~~n~~~~~~~gv~~ViGTTG~~~~~~~~l 111 (275)
T TIGR02130 72 ICIDYTHPS---AVNDNAAFYGKHGIPFVMGTTGGDREALAKL 111 (275)
T ss_pred EEEECCChH---HHHHHHHHHHHCCCCEEEcCCCCCHHHHHHH
Confidence 349998764 34556788888888888865 7887766555
No 78
>PF07283 TrbH: Conjugal transfer protein TrbH; InterPro: IPR010837 This entry represents TrbH, a bacterial conjugal transfer protein approximately 150 residues long. TrbH contains a putative membrane lipoprotein lipid attachment site [].
Probab=24.55 E-value=85 Score=23.13 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=24.3
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC
Q 025939 19 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGIS 52 (246)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi~ 52 (246)
+|.|...........|.++|+.+||-.+.++.-.
T Consensus 26 t~~L~q~~~d~Fg~aL~~~LR~~GYaV~e~~~~~ 59 (121)
T PF07283_consen 26 TFELKQKDPDPFGQALENALRAKGYAVIEDDPPD 59 (121)
T ss_pred EEEEEcCCCChHHHHHHHHHHhcCcEEEecCCcc
Confidence 3444323334567889999999999999987654
No 79
>PRK13835 conjugal transfer protein TrbH; Provisional
Probab=23.69 E-value=95 Score=23.64 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=21.9
Q ss_pred ceeeCCCcchHHHHHHHHHHHHhcceEEEEc
Q 025939 18 NCIDLSSPDIQQSVSLLKQACLDCGFFYVVN 48 (246)
Q Consensus 18 PvIDls~~~~~~~~~~l~~A~~~~Gff~l~~ 48 (246)
-+|.|..+. ......|..+++.|||-.+.+
T Consensus 59 tt~~l~q~~-d~Fg~aL~~aLr~~GYaVvtd 88 (145)
T PRK13835 59 TTIKLKKDT-SPFGQALEAALKGWGYAVVTD 88 (145)
T ss_pred eEEEEeecC-cHHHHHHHHHHHhcCeEEeec
Confidence 345555333 466788999999999999973
No 80
>COG1741 Pirin-related protein [General function prediction only]
Probab=23.21 E-value=75 Score=27.05 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=22.3
Q ss_pred ccccccccccCceeEEee------CCCCceeEeeCCCC
Q 025939 202 MYGAGAHSDYGLITLLAT------DEVAGLQICKDRDA 233 (246)
Q Consensus 202 ~~~~~~HtD~g~lTiL~q------d~~~GLqv~~~~~~ 233 (246)
.++--+|.++.+||.+++ |..+.-++..+++-
T Consensus 56 ~f~pHPHrg~etvTyvl~G~i~HrDS~Gn~~~i~pGdv 93 (276)
T COG1741 56 GFPPHPHRGLETVTYVLDGEIEHRDSLGNKGVIRPGDV 93 (276)
T ss_pred cCCCCCCCCcEEEEEEEccEEEEeecCCceeeecccce
Confidence 355679999999999986 55555555554443
No 81
>COG1660 Predicted P-loop-containing kinase [General function prediction only]
Probab=22.70 E-value=1.2e+02 Score=25.66 Aligned_cols=28 Identities=14% Similarity=0.288 Sum_probs=22.3
Q ss_pred HHHHHhcceEEEEcCCCCHHHHHHHHHHHh
Q 025939 35 KQACLDCGFFYVVNHGISQEFMEEVFSQSK 64 (246)
Q Consensus 35 ~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~ 64 (246)
.+++.+.|||.++| +|++++.++.+.+.
T Consensus 18 l~~lEDlGyycvDN--LPp~Llp~~~~~~~ 45 (286)
T COG1660 18 LRVLEDLGYYCVDN--LPPQLLPKLADLML 45 (286)
T ss_pred HHHHHhcCeeeecC--CCHHHHHHHHHHHh
Confidence 37888999999999 66778777777543
No 82
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=22.62 E-value=1.3e+02 Score=24.79 Aligned_cols=36 Identities=11% Similarity=0.068 Sum_probs=24.5
Q ss_pred ccceeeCC------CcchHHHHHHHHHHHHhc-------ceEEEEcCCC
Q 025939 16 VLNCIDLS------SPDIQQSVSLLKQACLDC-------GFFYVVNHGI 51 (246)
Q Consensus 16 ~iPvIDls------~~~~~~~~~~l~~A~~~~-------Gff~l~~hgi 51 (246)
.||++.+. .+...+..+.|.+++.+. -.+.|.|||+
T Consensus 125 ~ip~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGv 173 (231)
T TIGR00760 125 TIPCTRPMTDEEINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGP 173 (231)
T ss_pred ceeeecCCCcccccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCc
Confidence 58887543 222235577788888776 5789999996
No 83
>PRK10628 LigB family dioxygenase; Provisional
Probab=22.19 E-value=1.2e+02 Score=25.32 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=24.0
Q ss_pred CCCccceeeCCCc---chH--HHHHHHHHHHHhcceEEEEcCC
Q 025939 13 AQTVLNCIDLSSP---DIQ--QSVSLLKQACLDCGFFYVVNHG 50 (246)
Q Consensus 13 ~~~~iPvIDls~~---~~~--~~~~~l~~A~~~~Gff~l~~hg 50 (246)
++++||||-+|-. +.. =.+.+..+.|++.|.. |++.|
T Consensus 107 P~adIPVvqlSl~~~~~~~~h~~lG~aL~~LR~~gvL-IigSG 148 (246)
T PRK10628 107 PDADIPMVQLSIDSTKPAAWHFEMGRKLAALRDEGIM-LVASG 148 (246)
T ss_pred CCCCCCeEEeecCCCCCHHHHHHHHHHHHhhccCCEE-EEecC
Confidence 3689999999832 221 1255666788888987 44444
No 84
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=21.52 E-value=3.2e+02 Score=20.40 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHHh
Q 025939 28 QQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQSK 64 (246)
Q Consensus 28 ~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~~ 64 (246)
...++++.+.++++.++++.++ |++...+..+....+
T Consensus 4 ~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~ 41 (155)
T cd00379 4 EELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELR 41 (155)
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHH
Confidence 4568888999999887777655 788776666655443
No 85
>PF13309 HTH_22: HTH domain
Probab=21.30 E-value=86 Score=20.05 Aligned_cols=21 Identities=10% Similarity=0.202 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhcceEEEEcC
Q 025939 29 QSVSLLKQACLDCGFFYVVNH 49 (246)
Q Consensus 29 ~~~~~l~~A~~~~Gff~l~~h 49 (246)
+.-.+|.+.|.+-|+|.|++.
T Consensus 24 ~~k~~iV~~L~~~G~F~lKga 44 (64)
T PF13309_consen 24 EEKKEIVRQLYEKGIFLLKGA 44 (64)
T ss_pred HHHHHHHHHHHHCCCcccCcH
Confidence 345677899999999999874
No 86
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=20.92 E-value=1.9e+02 Score=20.50 Aligned_cols=39 Identities=21% Similarity=0.091 Sum_probs=27.1
Q ss_pred ccceeeCCCcc-----hHHHHHHHHHHHHhcceEEEEcCCCCHHH
Q 025939 16 VLNCIDLSSPD-----IQQSVSLLKQACLDCGFFYVVNHGISQEF 55 (246)
Q Consensus 16 ~iPvIDls~~~-----~~~~~~~l~~A~~~~Gff~l~~hgi~~~~ 55 (246)
.+--||++... .-.++-.+.+-|+..|. .|.-+|+|.++
T Consensus 40 ~~~~idLs~v~rvDSaglALL~~~~~~~k~~g~-~~~L~~~p~~L 83 (99)
T COG3113 40 DTVRIDLSGVSRVDSAGLALLLHLIRLAKKQGN-AVTLTGVPEQL 83 (99)
T ss_pred CeEEEehhhcceechHHHHHHHHHHHHHHHcCC-eeEEecCcHHH
Confidence 35567777322 13456777889999998 88888998654
No 87
>PF03113 RSV_NS2: Respiratory synctial virus non-structural protein NS2; InterPro: IPR004336 The molecular structure and function of the NS2 protein is not known. However, mutants lacking the NS2 grow at slower rates when compared to the wild-type yet NS2 is not essential for viral replication [].
Probab=20.63 E-value=1e+02 Score=21.57 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=28.0
Q ss_pred CCCCCccceeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 025939 11 AEAQTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (246)
Q Consensus 11 ~~~~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~~hgi 51 (246)
......+-+-|+....-+..+-.|.+....+-|+||+||-.
T Consensus 7 ~tt~qrl~i~dmrpls~et~i~sltk~iith~fiylinhec 47 (124)
T PF03113_consen 7 NTTTQRLMINDMRPLSIETIIISLTKDIITHTFIYLINHEC 47 (124)
T ss_pred CcchhheeeccCccceeeeehhhHHHhhhheeeEEEecccc
Confidence 34455666677764433344566777788999999999963
No 88
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=20.37 E-value=2.1e+02 Score=17.04 Aligned_cols=27 Identities=30% Similarity=0.476 Sum_probs=19.2
Q ss_pred HHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHH
Q 025939 31 VSLLKQACLDCGFFYVVNHGISQEFMEEVFSQS 63 (246)
Q Consensus 31 ~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~ 63 (246)
++.+.+++++.||. |++++++.+++.+
T Consensus 21 ~~~~l~~l~~~g~~------is~~l~~~~L~~~ 47 (48)
T PF11848_consen 21 VKPLLDRLQQAGFR------ISPKLIEEILRRA 47 (48)
T ss_pred HHHHHHHHHHcCcc------cCHHHHHHHHHHc
Confidence 55566777888876 6777887777654
No 89
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=20.04 E-value=2.7e+02 Score=22.95 Aligned_cols=38 Identities=24% Similarity=0.444 Sum_probs=27.5
Q ss_pred cchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHH
Q 025939 25 PDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQS 63 (246)
Q Consensus 25 ~~~~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~ 63 (246)
....++.+.+.+||.+.|| +|.-. ||+.+=++.+++.+
T Consensus 160 l~~leE~~avA~aca~~g~-~lEPTGGIdl~Nf~~I~~i~ 198 (236)
T TIGR03581 160 LKHLEEYAAVAKACAKHGF-YLEPTGGIDLDNFEEIVQIA 198 (236)
T ss_pred cccHHHHHHHHHHHHHcCC-ccCCCCCccHHhHHHHHHHH
Confidence 3456778899999999997 56555 68876566666554
Done!