Query 025941
Match_columns 246
No_of_seqs 254 out of 2290
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 11:17:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025941.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025941hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 5.1E-53 1.1E-57 378.4 15.2 185 52-245 42-226 (492)
2 PF05577 Peptidase_S28: Serine 100.0 9.5E-44 2.1E-48 331.6 16.5 166 62-243 1-167 (434)
3 KOG2182 Hydrolytic enzymes of 100.0 1.4E-39 3E-44 298.4 15.4 176 52-243 48-226 (514)
4 PF05576 Peptidase_S37: PS-10 99.8 1.8E-19 3.8E-24 163.3 9.4 156 55-238 31-187 (448)
5 PLN02385 hydrolase; alpha/beta 99.7 9.3E-16 2E-20 139.1 15.8 110 96-220 86-196 (349)
6 KOG1455 Lysophospholipase [Lip 99.7 1.3E-15 2.9E-20 133.5 14.1 127 86-228 43-170 (313)
7 PLN02298 hydrolase, alpha/beta 99.6 2.8E-15 6.2E-20 134.5 13.5 111 97-221 59-169 (330)
8 PHA02857 monoglyceride lipase; 99.6 8.1E-15 1.7E-19 127.8 13.6 110 96-222 24-133 (276)
9 PRK00870 haloalkane dehalogena 99.6 1.1E-14 2.3E-19 129.1 13.4 104 97-220 46-149 (302)
10 PLN02824 hydrolase, alpha/beta 99.6 9.7E-15 2.1E-19 128.7 12.1 109 97-221 29-137 (294)
11 PRK10749 lysophospholipase L2; 99.6 3.3E-14 7.1E-19 128.2 13.5 113 96-220 53-165 (330)
12 TIGR02240 PHA_depoly_arom poly 99.6 1.1E-14 2.4E-19 127.3 9.4 102 97-221 25-126 (276)
13 PF12697 Abhydrolase_6: Alpha/ 99.6 3E-14 6.5E-19 117.2 11.1 102 100-222 1-102 (228)
14 TIGR01250 pro_imino_pep_2 prol 99.6 3.9E-14 8.5E-19 121.4 11.6 105 97-219 25-129 (288)
15 COG2267 PldB Lysophospholipase 99.5 3.2E-14 7E-19 127.1 11.3 108 97-221 34-142 (298)
16 PLN02965 Probable pheophorbida 99.5 4.6E-14 9.9E-19 122.2 11.7 103 98-220 4-106 (255)
17 PRK03592 haloalkane dehalogena 99.5 3.9E-14 8.5E-19 124.9 11.1 102 97-221 27-128 (295)
18 PRK10673 acyl-CoA esterase; Pr 99.5 4.2E-14 9.2E-19 121.1 10.7 99 96-218 15-113 (255)
19 TIGR01607 PST-A Plasmodium sub 99.5 6.6E-14 1.4E-18 126.7 11.3 118 95-221 19-185 (332)
20 TIGR03343 biphenyl_bphD 2-hydr 99.5 8.4E-14 1.8E-18 121.2 9.8 106 97-220 30-135 (282)
21 TIGR03101 hydr2_PEP hydrolase, 99.5 3.5E-13 7.6E-18 118.5 13.6 111 97-222 25-135 (266)
22 TIGR03056 bchO_mg_che_rel puta 99.5 1.4E-13 3.1E-18 118.7 10.2 103 97-221 28-130 (278)
23 PLN02211 methyl indole-3-aceta 99.5 3.3E-13 7.1E-18 118.8 11.9 105 96-220 17-121 (273)
24 TIGR03611 RutD pyrimidine util 99.5 1.9E-13 4.2E-18 115.6 9.3 101 97-219 13-113 (257)
25 PRK11126 2-succinyl-6-hydroxy- 99.5 3.2E-13 6.9E-18 115.0 10.1 99 98-221 3-102 (242)
26 TIGR01249 pro_imino_pep_1 prol 99.5 2.7E-13 5.9E-18 120.7 9.9 104 97-221 27-130 (306)
27 PLN02511 hydrolase 99.5 5.2E-13 1.1E-17 123.3 12.0 108 97-221 100-210 (388)
28 PRK10349 carboxylesterase BioH 99.5 3.5E-13 7.6E-18 116.2 10.2 93 99-219 15-107 (256)
29 PRK06489 hypothetical protein; 99.5 1.5E-12 3.3E-17 118.7 14.7 112 97-219 69-187 (360)
30 TIGR03695 menH_SHCHC 2-succiny 99.5 6.6E-13 1.4E-17 110.7 11.1 102 98-220 2-104 (251)
31 PLN02894 hydrolase, alpha/beta 99.4 1.2E-12 2.6E-17 121.4 13.6 109 95-221 103-211 (402)
32 PLN02578 hydrolase 99.4 9.8E-13 2.1E-17 119.8 12.3 100 97-219 86-185 (354)
33 PLN02652 hydrolase; alpha/beta 99.4 9.4E-13 2E-17 121.9 12.1 107 96-221 135-245 (395)
34 PLN02679 hydrolase, alpha/beta 99.4 5.5E-13 1.2E-17 121.8 10.4 103 97-221 88-191 (360)
35 PLN03087 BODYGUARD 1 domain co 99.4 6.8E-13 1.5E-17 125.4 11.3 108 97-222 201-310 (481)
36 TIGR02427 protocat_pcaD 3-oxoa 99.4 3.9E-13 8.5E-18 112.5 7.9 101 98-221 14-114 (251)
37 KOG4409 Predicted hydrolase/ac 99.4 6E-13 1.3E-17 119.0 9.1 105 96-220 89-194 (365)
38 PLN03084 alpha/beta hydrolase 99.4 1.2E-12 2.6E-17 120.7 11.1 108 96-222 126-233 (383)
39 KOG4178 Soluble epoxide hydrol 99.4 1.2E-12 2.7E-17 116.2 10.5 107 96-222 43-149 (322)
40 PRK03204 haloalkane dehalogena 99.4 1.4E-12 3E-17 115.2 10.8 103 97-221 34-136 (286)
41 TIGR01738 bioH putative pimelo 99.4 2.1E-12 4.5E-17 107.9 10.7 94 98-219 5-98 (245)
42 PRK08775 homoserine O-acetyltr 99.4 5.7E-13 1.2E-17 120.7 7.7 104 97-220 57-172 (343)
43 TIGR01840 esterase_phb esteras 99.4 3.9E-12 8.6E-17 107.6 10.6 119 97-222 13-131 (212)
44 KOG2564 Predicted acetyltransf 99.4 6.2E-12 1.3E-16 109.4 10.7 129 59-216 46-177 (343)
45 PRK10985 putative hydrolase; P 99.3 9E-12 1.9E-16 112.1 12.3 110 97-222 58-169 (324)
46 TIGR03100 hydr1_PEP hydrolase, 99.3 5.1E-11 1.1E-15 104.8 14.7 110 97-223 26-136 (274)
47 PRK14875 acetoin dehydrogenase 99.3 2.2E-11 4.7E-16 110.3 12.0 102 96-220 130-231 (371)
48 PRK10566 esterase; Provisional 99.3 2.4E-11 5.2E-16 104.3 11.6 110 97-217 27-138 (249)
49 PRK07581 hypothetical protein; 99.3 1.4E-11 2.9E-16 111.2 9.7 116 97-219 40-157 (339)
50 PLN02980 2-oxoglutarate decarb 99.2 4.8E-11 1E-15 127.1 12.1 109 96-219 1370-1478(1655)
51 TIGR01392 homoserO_Ac_trn homo 99.2 2.8E-11 6E-16 110.0 7.8 119 97-221 31-162 (351)
52 PF00561 Abhydrolase_1: alpha/ 99.2 4.6E-11 1E-15 99.6 8.4 78 129-220 1-78 (230)
53 KOG1454 Predicted hydrolase/ac 99.2 4.2E-11 9E-16 108.3 8.3 111 96-225 57-170 (326)
54 PRK05077 frsA fermentation/res 99.2 2.4E-10 5.2E-15 106.5 12.4 108 97-222 193-301 (414)
55 PRK05855 short chain dehydroge 99.2 6.8E-11 1.5E-15 113.0 8.8 105 96-220 24-130 (582)
56 PF12695 Abhydrolase_5: Alpha/ 99.1 4.4E-10 9.5E-15 88.0 10.2 93 99-219 1-93 (145)
57 KOG2382 Predicted alpha/beta h 99.1 4.5E-10 9.8E-15 99.9 11.4 108 96-221 51-160 (315)
58 TIGR01836 PHA_synth_III_C poly 99.1 5.7E-10 1.2E-14 101.4 11.8 109 97-223 62-173 (350)
59 TIGR03230 lipo_lipase lipoprot 99.1 1.5E-09 3.3E-14 101.4 13.9 110 96-219 40-152 (442)
60 COG1647 Esterase/lipase [Gener 99.1 9.2E-10 2E-14 93.1 10.4 109 97-226 15-123 (243)
61 cd00707 Pancreat_lipase_like P 99.1 1E-09 2.3E-14 96.9 11.3 108 97-218 36-144 (275)
62 KOG1552 Predicted alpha/beta h 99.1 4.8E-10 1E-14 96.8 8.7 102 98-220 61-162 (258)
63 PRK13604 luxD acyl transferase 99.1 7.7E-10 1.7E-14 98.8 10.3 103 97-220 37-140 (307)
64 TIGR02821 fghA_ester_D S-formy 99.0 4.2E-09 9E-14 92.7 13.2 120 97-220 42-172 (275)
65 COG0596 MhpC Predicted hydrola 99.0 1.2E-09 2.5E-14 90.2 8.2 103 98-222 22-124 (282)
66 PRK00175 metX homoserine O-ace 99.0 1.1E-09 2.5E-14 100.7 7.8 118 97-220 48-181 (379)
67 TIGR00976 /NonD putative hydro 99.0 2.4E-09 5.1E-14 103.2 10.2 110 98-221 23-132 (550)
68 PLN02872 triacylglycerol lipas 98.9 1.4E-09 3.1E-14 100.8 6.5 116 96-218 73-194 (395)
69 KOG4391 Predicted alpha/beta h 98.9 1.9E-09 4.1E-14 91.1 5.6 104 96-217 77-180 (300)
70 TIGR03502 lipase_Pla1_cef extr 98.9 7E-09 1.5E-13 102.7 10.4 104 99-206 451-575 (792)
71 PRK11071 esterase YqiA; Provis 98.9 1.5E-08 3.2E-13 84.8 10.4 91 98-222 2-94 (190)
72 PF07819 PGAP1: PGAP1-like pro 98.8 6.9E-08 1.5E-12 83.0 12.7 133 96-243 3-147 (225)
73 PLN00021 chlorophyllase 98.8 4.6E-08 9.9E-13 88.1 12.1 100 97-219 52-164 (313)
74 PF07859 Abhydrolase_3: alpha/ 98.8 1.3E-08 2.9E-13 85.2 8.0 103 100-221 1-110 (211)
75 PRK11460 putative hydrolase; P 98.8 9E-08 1.9E-12 82.4 12.7 119 96-220 15-137 (232)
76 PRK10162 acetyl esterase; Prov 98.8 3.3E-08 7.2E-13 88.9 10.5 105 98-221 82-195 (318)
77 PLN02442 S-formylglutathione h 98.8 7.4E-08 1.6E-12 85.3 12.5 121 98-221 48-178 (283)
78 PF10503 Esterase_phd: Esteras 98.8 3.2E-08 7E-13 84.7 9.4 116 98-221 17-132 (220)
79 PF00326 Peptidase_S9: Prolyl 98.8 1.6E-08 3.4E-13 85.2 6.7 93 121-221 7-99 (213)
80 COG0429 Predicted hydrolase of 98.7 1.1E-07 2.3E-12 85.1 11.0 108 98-221 76-185 (345)
81 TIGR01838 PHA_synth_I poly(R)- 98.7 2.5E-07 5.4E-12 88.7 12.8 110 96-222 187-303 (532)
82 KOG1838 Alpha/beta hydrolase [ 98.7 2.1E-07 4.6E-12 85.6 11.5 108 99-222 127-236 (409)
83 PF12146 Hydrolase_4: Putative 98.7 5E-08 1.1E-12 70.3 5.6 64 96-175 15-79 (79)
84 COG1506 DAP2 Dipeptidyl aminop 98.6 1.1E-07 2.4E-12 93.0 8.0 110 99-222 396-508 (620)
85 PF00975 Thioesterase: Thioest 98.6 3.1E-07 6.7E-12 77.7 9.4 100 98-220 1-103 (229)
86 PF10230 DUF2305: Uncharacteri 98.6 1.1E-06 2.4E-11 77.4 12.8 119 99-226 4-127 (266)
87 PF06342 DUF1057: Alpha/beta h 98.5 2.9E-06 6.4E-11 74.6 13.3 111 97-229 35-146 (297)
88 PRK07868 acyl-CoA synthetase; 98.5 1.1E-06 2.4E-11 90.3 12.4 111 96-222 66-178 (994)
89 PF05677 DUF818: Chlamydia CHL 98.4 1.7E-06 3.6E-11 77.9 10.3 98 96-208 136-237 (365)
90 PF02129 Peptidase_S15: X-Pro 98.4 9.8E-07 2.1E-11 77.5 8.0 87 124-224 53-139 (272)
91 COG0657 Aes Esterase/lipase [L 98.4 3E-06 6.6E-11 75.6 11.1 105 97-220 79-190 (312)
92 PRK10115 protease 2; Provision 98.3 1.7E-06 3.6E-11 85.7 9.1 114 98-221 445-559 (686)
93 KOG2984 Predicted hydrolase [G 98.3 3.7E-07 8.1E-12 76.6 3.8 107 98-221 43-149 (277)
94 PRK06765 homoserine O-acetyltr 98.3 1.4E-06 3.1E-11 80.7 7.3 86 128-219 99-194 (389)
95 PF06500 DUF1100: Alpha/beta h 98.3 9.6E-07 2.1E-11 81.7 6.0 111 97-224 189-299 (411)
96 PLN02733 phosphatidylcholine-s 98.3 2.8E-06 6E-11 79.9 9.2 86 122-224 115-204 (440)
97 KOG2281 Dipeptidyl aminopeptid 98.3 4.2E-06 9.1E-11 80.3 9.8 117 96-222 640-762 (867)
98 PF01674 Lipase_2: Lipase (cla 98.3 4.5E-06 9.8E-11 71.5 8.7 92 98-207 2-96 (219)
99 KOG1553 Predicted alpha/beta h 98.2 1.3E-05 2.8E-10 72.2 9.6 98 126-243 266-369 (517)
100 COG4757 Predicted alpha/beta h 98.1 7.6E-06 1.6E-10 70.1 7.4 92 101-205 33-124 (281)
101 COG3509 LpqC Poly(3-hydroxybut 98.1 1.9E-05 4.1E-10 69.8 9.8 117 98-221 62-179 (312)
102 PF09752 DUF2048: Uncharacteri 98.1 5.6E-05 1.2E-09 68.5 11.8 147 54-212 52-201 (348)
103 PRK10252 entF enterobactin syn 98.0 2.2E-05 4.8E-10 82.3 10.3 99 97-219 1068-1169(1296)
104 PTZ00472 serine carboxypeptida 98.0 7.1E-05 1.5E-09 71.0 12.7 84 128-221 121-216 (462)
105 KOG1515 Arylacetamide deacetyl 98.0 9.5E-05 2.1E-09 67.2 12.8 110 98-226 91-212 (336)
106 COG0400 Predicted esterase [Ge 98.0 3E-05 6.6E-10 65.8 8.9 55 165-219 78-132 (207)
107 PF01738 DLH: Dienelactone hyd 98.0 1.1E-05 2.4E-10 68.2 6.2 113 97-219 14-130 (218)
108 KOG4667 Predicted esterase [Li 98.0 3.7E-05 8E-10 65.3 8.7 106 96-219 32-137 (269)
109 PF00756 Esterase: Putative es 98.0 8.7E-05 1.9E-09 63.7 10.9 49 172-220 101-149 (251)
110 PF05448 AXE1: Acetyl xylan es 98.0 3.4E-05 7.5E-10 69.7 8.4 118 99-222 85-210 (320)
111 KOG2100 Dipeptidyl aminopeptid 97.9 2.9E-05 6.4E-10 77.6 8.6 120 97-224 525-646 (755)
112 PF06821 Ser_hydrolase: Serine 97.9 8.7E-05 1.9E-09 61.2 9.7 53 170-222 39-92 (171)
113 cd00312 Esterase_lipase Estera 97.9 3.3E-05 7.1E-10 73.3 8.2 110 97-222 94-214 (493)
114 PF06028 DUF915: Alpha/beta hy 97.9 5E-05 1.1E-09 66.5 8.7 121 96-225 10-147 (255)
115 COG2021 MET2 Homoserine acetyl 97.9 4.5E-05 9.7E-10 69.4 8.4 118 97-222 51-183 (368)
116 COG3319 Thioesterase domains o 97.9 4E-05 8.8E-10 67.1 7.5 99 98-220 1-102 (257)
117 PF02230 Abhydrolase_2: Phosph 97.9 6.6E-05 1.4E-09 63.6 8.5 58 164-222 84-141 (216)
118 KOG2565 Predicted hydrolases o 97.9 1.8E-05 3.9E-10 71.9 5.1 108 97-221 152-264 (469)
119 PRK05371 x-prolyl-dipeptidyl a 97.9 0.0001 2.2E-09 74.0 10.8 88 120-220 271-372 (767)
120 PF08538 DUF1749: Protein of u 97.9 0.00032 6.8E-09 62.7 12.6 114 97-226 32-152 (303)
121 TIGR01839 PHA_synth_II poly(R) 97.8 0.00014 3.1E-09 69.9 10.2 110 96-222 214-329 (560)
122 PF03403 PAF-AH_p_II: Platelet 97.8 0.00014 3.1E-09 67.2 10.0 120 98-222 100-263 (379)
123 COG0412 Dienelactone hydrolase 97.8 0.00033 7.2E-09 60.6 11.6 113 98-216 28-141 (236)
124 COG2945 Predicted hydrolase of 97.8 0.00029 6.3E-09 58.8 10.5 108 98-222 29-138 (210)
125 COG4099 Predicted peptidase [G 97.8 0.00016 3.5E-09 64.2 8.9 47 173-219 256-302 (387)
126 COG3208 GrsT Predicted thioest 97.7 5.4E-05 1.2E-09 65.3 5.2 100 97-220 7-113 (244)
127 PF05728 UPF0227: Uncharacteri 97.7 0.00032 6.9E-09 58.7 9.3 80 100-210 2-83 (187)
128 COG2819 Predicted hydrolase of 97.7 0.0006 1.3E-08 59.7 11.1 48 179-226 130-177 (264)
129 PF12740 Chlorophyllase2: Chlo 97.7 0.00042 9.1E-09 60.7 10.2 99 98-218 17-128 (259)
130 KOG4627 Kynurenine formamidase 97.7 0.00018 3.8E-09 60.8 7.3 104 97-220 67-171 (270)
131 PLN02209 serine carboxypeptida 97.6 0.0016 3.4E-08 61.4 14.4 84 128-221 117-212 (437)
132 PLN03016 sinapoylglucose-malat 97.6 0.00093 2E-08 62.9 12.7 84 128-221 115-210 (433)
133 PF05057 DUF676: Putative seri 97.6 0.00044 9.5E-09 59.0 8.7 63 163-225 55-129 (217)
134 PF12715 Abhydrolase_7: Abhydr 97.5 0.00015 3.3E-09 66.5 5.7 99 121-220 153-259 (390)
135 PF03096 Ndr: Ndr family; Int 97.5 0.00046 1E-08 61.1 8.4 107 97-219 23-132 (283)
136 PF00135 COesterase: Carboxyle 97.5 0.0008 1.7E-08 63.8 10.5 116 97-224 124-248 (535)
137 PF00151 Lipase: Lipase; Inte 97.5 0.0003 6.6E-09 63.9 6.9 108 97-217 71-183 (331)
138 PRK10439 enterobactin/ferric e 97.5 0.0022 4.7E-08 60.0 12.8 51 172-222 272-324 (411)
139 PF00450 Peptidase_S10: Serine 97.4 0.00064 1.4E-08 62.7 8.7 113 96-221 38-181 (415)
140 PF11144 DUF2920: Protein of u 97.4 0.0032 6.8E-08 58.3 12.8 55 167-221 163-219 (403)
141 PRK04940 hypothetical protein; 97.4 0.0025 5.3E-08 53.0 10.5 109 100-239 2-114 (180)
142 KOG2931 Differentiation-relate 97.3 0.0024 5.2E-08 56.6 10.6 107 97-219 46-155 (326)
143 COG2272 PnbA Carboxylesterase 97.3 0.001 2.2E-08 62.8 8.2 114 97-222 93-218 (491)
144 KOG3724 Negative regulator of 97.3 0.0029 6.3E-08 62.6 11.4 55 187-241 183-242 (973)
145 KOG1282 Serine carboxypeptidas 97.3 0.025 5.5E-07 53.5 17.2 111 97-220 72-212 (454)
146 cd00741 Lipase Lipase. Lipase 97.2 0.0015 3.2E-08 52.2 7.3 55 168-224 12-70 (153)
147 PF05990 DUF900: Alpha/beta hy 97.2 0.0025 5.4E-08 55.1 8.8 95 96-206 17-113 (233)
148 PF02450 LCAT: Lecithin:choles 97.1 0.0012 2.6E-08 61.2 6.5 58 164-224 100-163 (389)
149 PF01764 Lipase_3: Lipase (cla 97.0 0.0015 3.2E-08 51.0 5.5 53 168-222 48-106 (140)
150 PF06057 VirJ: Bacterial virul 97.0 0.0093 2E-07 49.9 10.4 97 99-218 4-104 (192)
151 smart00824 PKS_TE Thioesterase 97.0 0.0046 9.9E-08 50.4 8.4 73 128-219 25-100 (212)
152 PF08840 BAAT_C: BAAT / Acyl-C 97.0 0.0017 3.8E-08 55.1 5.9 56 169-225 5-60 (213)
153 cd00519 Lipase_3 Lipase (class 96.9 0.0025 5.4E-08 54.4 6.7 55 165-222 109-168 (229)
154 KOG2624 Triglyceride lipase-ch 96.9 0.0023 4.9E-08 59.6 6.8 120 96-221 72-199 (403)
155 COG1075 LipA Predicted acetylt 96.9 0.0027 5.9E-08 57.8 7.2 102 97-222 59-165 (336)
156 COG4188 Predicted dienelactone 96.9 0.0044 9.5E-08 56.6 8.0 103 97-209 70-182 (365)
157 COG0627 Predicted esterase [Ge 96.9 0.0063 1.4E-07 55.0 8.9 124 97-224 53-190 (316)
158 PF06259 Abhydrolase_8: Alpha/ 96.8 0.0041 8.8E-08 51.6 7.0 59 163-222 87-145 (177)
159 PF07224 Chlorophyllase: Chlor 96.8 0.0062 1.3E-07 53.4 7.7 88 98-208 46-142 (307)
160 COG3458 Acetyl esterase (deace 96.8 0.0038 8.2E-08 54.9 6.4 119 97-221 83-210 (321)
161 COG4814 Uncharacterized protei 96.6 0.02 4.3E-07 50.0 9.3 118 97-222 45-177 (288)
162 COG1770 PtrB Protease II [Amin 96.5 0.014 3E-07 56.9 9.2 150 56-221 400-562 (682)
163 PF03583 LIP: Secretory lipase 96.5 0.026 5.6E-07 50.3 10.3 84 124-221 22-113 (290)
164 PF10340 DUF2424: Protein of u 96.5 0.054 1.2E-06 49.9 12.3 106 98-223 122-237 (374)
165 PLN02454 triacylglycerol lipas 96.4 0.013 2.9E-07 54.5 8.2 41 165-205 207-247 (414)
166 COG2939 Carboxypeptidase C (ca 96.4 0.013 2.8E-07 55.5 7.8 115 97-225 100-240 (498)
167 KOG3101 Esterase D [General fu 96.4 0.006 1.3E-07 51.9 5.1 126 97-226 43-180 (283)
168 PF12048 DUF3530: Protein of u 96.4 0.11 2.3E-06 46.9 13.4 134 80-220 73-228 (310)
169 KOG2369 Lecithin:cholesterol a 96.3 0.0032 7E-08 59.0 3.3 60 163-224 161-228 (473)
170 COG2936 Predicted acyl esteras 96.3 0.0088 1.9E-07 57.7 6.3 86 123-222 75-160 (563)
171 COG3571 Predicted hydrolase of 96.2 0.062 1.3E-06 44.1 9.6 107 98-223 15-126 (213)
172 PF11187 DUF2974: Protein of u 96.1 0.017 3.6E-07 49.7 6.3 51 169-222 70-124 (224)
173 PLN02310 triacylglycerol lipas 96.1 0.016 3.4E-07 54.0 6.5 57 164-222 189-249 (405)
174 KOG3847 Phospholipase A2 (plat 96.1 0.023 4.9E-07 51.1 7.2 40 184-224 239-278 (399)
175 PLN02213 sinapoylglucose-malat 96.0 0.026 5.6E-07 51.0 7.5 83 129-221 2-96 (319)
176 COG4782 Uncharacterized protei 96.0 0.037 8.1E-07 50.5 8.3 95 96-206 115-211 (377)
177 PF07082 DUF1350: Protein of u 95.9 0.087 1.9E-06 45.9 10.2 101 99-218 18-122 (250)
178 PLN02571 triacylglycerol lipas 95.9 0.033 7.2E-07 51.9 8.0 39 164-206 208-246 (413)
179 COG3545 Predicted esterase of 95.9 0.019 4.2E-07 47.3 5.5 38 185-222 58-95 (181)
180 PLN02606 palmitoyl-protein thi 95.8 0.35 7.6E-06 43.4 13.6 108 98-227 27-138 (306)
181 PLN02162 triacylglycerol lipas 95.7 0.03 6.6E-07 52.8 7.0 39 184-222 276-322 (475)
182 PLN03037 lipase class 3 family 95.6 0.026 5.7E-07 53.8 6.3 56 164-221 298-358 (525)
183 PLN02633 palmitoyl protein thi 95.6 0.21 4.6E-06 44.9 11.6 109 97-226 25-136 (314)
184 PLN02324 triacylglycerol lipas 95.6 0.047 1E-06 50.9 7.5 37 169-205 198-234 (415)
185 TIGR01849 PHB_depoly_PhaZ poly 95.5 0.14 3E-06 47.9 10.5 105 98-225 103-212 (406)
186 PLN02517 phosphatidylcholine-s 95.5 0.018 4E-07 55.8 4.8 57 164-222 193-264 (642)
187 KOG3975 Uncharacterized conser 95.5 0.21 4.6E-06 43.7 10.6 108 97-217 28-143 (301)
188 PLN00413 triacylglycerol lipas 95.5 0.048 1E-06 51.6 7.3 48 173-222 273-328 (479)
189 COG3150 Predicted esterase [Ge 95.4 0.063 1.4E-06 44.1 6.9 79 100-207 2-80 (191)
190 KOG4840 Predicted hydrolases o 95.4 0.03 6.5E-07 48.1 5.2 107 98-222 36-144 (299)
191 COG3243 PhaC Poly(3-hydroxyalk 95.4 0.062 1.3E-06 50.1 7.6 110 96-222 106-218 (445)
192 PF02089 Palm_thioest: Palmito 95.3 0.092 2E-06 46.6 8.1 115 97-227 5-122 (279)
193 PLN02408 phospholipase A1 95.2 0.04 8.8E-07 50.6 5.9 53 170-222 184-241 (365)
194 KOG3967 Uncharacterized conser 95.0 0.42 9.2E-06 40.9 10.8 109 96-221 100-227 (297)
195 PF11339 DUF3141: Protein of u 95.0 0.54 1.2E-05 45.1 12.7 111 95-225 66-179 (581)
196 PLN02934 triacylglycerol lipas 94.9 0.089 1.9E-06 50.2 7.3 52 170-223 307-366 (515)
197 PF11288 DUF3089: Protein of u 94.9 0.083 1.8E-06 44.9 6.3 58 164-222 74-137 (207)
198 KOG1516 Carboxylesterase and r 94.7 0.071 1.5E-06 51.3 6.3 117 98-227 112-238 (545)
199 PLN02761 lipase class 3 family 94.6 0.075 1.6E-06 50.8 5.9 38 168-205 272-313 (527)
200 PF03959 FSH1: Serine hydrolas 94.5 0.18 3.9E-06 42.6 7.7 117 97-221 4-145 (212)
201 PLN02802 triacylglycerol lipas 94.5 0.07 1.5E-06 50.9 5.6 52 170-221 314-370 (509)
202 PLN02753 triacylglycerol lipas 94.1 0.13 2.8E-06 49.3 6.5 37 169-205 292-331 (531)
203 PF01083 Cutinase: Cutinase; 94.1 0.68 1.5E-05 38.3 10.0 59 163-223 60-124 (179)
204 PLN02719 triacylglycerol lipas 93.8 0.13 2.9E-06 49.1 5.8 38 168-205 277-317 (518)
205 KOG2237 Predicted serine prote 93.7 0.049 1.1E-06 53.0 2.8 82 127-219 498-582 (712)
206 KOG2541 Palmitoyl protein thio 93.5 1.7 3.7E-05 38.5 11.8 111 98-228 24-135 (296)
207 COG4947 Uncharacterized protei 93.4 0.38 8.3E-06 39.9 7.2 35 187-221 102-136 (227)
208 PLN02847 triacylglycerol lipas 93.4 0.19 4.1E-06 49.0 6.2 33 171-205 238-270 (633)
209 KOG4569 Predicted lipase [Lipi 93.2 0.15 3.2E-06 46.5 5.1 50 169-220 156-211 (336)
210 COG3946 VirJ Type IV secretory 92.5 0.98 2.1E-05 42.1 9.2 69 120-208 279-348 (456)
211 KOG2112 Lysophospholipase [Lip 92.2 1.1 2.4E-05 37.9 8.6 38 182-219 89-126 (206)
212 PF07519 Tannase: Tannase and 92.1 0.3 6.4E-06 46.7 5.6 118 101-222 31-150 (474)
213 COG5153 CVT17 Putative lipase 91.8 0.22 4.7E-06 44.4 4.0 35 172-208 264-298 (425)
214 KOG4540 Putative lipase essent 91.8 0.22 4.7E-06 44.4 4.0 35 172-208 264-298 (425)
215 COG2382 Fes Enterochelin ester 90.9 0.54 1.2E-05 42.0 5.7 63 164-226 152-217 (299)
216 KOG3043 Predicted hydrolase re 90.5 0.16 3.4E-06 43.7 1.8 92 118-215 57-148 (242)
217 KOG1283 Serine carboxypeptidas 90.4 1.2 2.5E-05 40.5 7.2 98 97-206 30-142 (414)
218 COG1505 Serine proteases of th 89.4 0.41 8.9E-06 46.5 3.9 114 97-221 420-534 (648)
219 PF05277 DUF726: Protein of un 88.8 1.8 3.8E-05 39.7 7.4 40 184-223 218-262 (345)
220 KOG1202 Animal-type fatty acid 87.6 4.2 9.2E-05 43.1 9.7 112 96-246 2122-2234(2376)
221 TIGR03712 acc_sec_asp2 accesso 85.4 5.7 0.00012 38.0 8.9 106 95-225 286-393 (511)
222 KOG4388 Hormone-sensitive lipa 85.4 2.7 5.9E-05 41.1 6.8 107 99-221 398-508 (880)
223 PF05705 DUF829: Eukaryotic pr 85.1 9.6 0.00021 32.4 9.7 103 99-222 1-113 (240)
224 KOG1551 Uncharacterized conser 85.0 2.2 4.7E-05 37.9 5.5 100 98-211 113-220 (371)
225 PF02273 Acyl_transf_2: Acyl t 83.5 24 0.00053 31.1 11.2 103 97-220 29-133 (294)
226 KOG2029 Uncharacterized conser 80.1 3.7 8.1E-05 40.1 5.5 51 172-222 512-573 (697)
227 PF03283 PAE: Pectinacetyleste 77.0 15 0.00032 33.9 8.4 58 170-228 140-203 (361)
228 PF09949 DUF2183: Uncharacteri 76.0 17 0.00037 27.2 7.0 83 117-216 13-97 (100)
229 PF08237 PE-PPE: PE-PPE domain 75.7 10 0.00022 32.6 6.5 40 184-223 46-91 (225)
230 PLN02840 tRNA dimethylallyltra 74.8 22 0.00047 33.6 8.9 90 96-194 19-119 (421)
231 PLN02748 tRNA dimethylallyltra 73.5 24 0.00052 33.8 9.0 90 96-194 20-120 (468)
232 PF07172 GRP: Glycine rich pro 71.5 3.7 8.1E-05 30.5 2.5 27 1-27 1-27 (95)
233 COG0324 MiaA tRNA delta(2)-iso 65.5 54 0.0012 29.6 9.1 89 98-195 3-102 (308)
234 PRK00091 miaA tRNA delta(2)-is 65.4 50 0.0011 29.7 8.9 87 98-193 4-101 (307)
235 KOG2551 Phospholipase/carboxyh 64.9 38 0.00082 29.2 7.5 101 97-205 5-123 (230)
236 KOG3253 Predicted alpha/beta h 58.0 45 0.00098 33.1 7.5 64 161-224 223-289 (784)
237 TIGR00174 miaA tRNA isopenteny 57.2 44 0.00096 29.8 7.0 87 100-195 1-98 (287)
238 COG1576 Uncharacterized conser 57.0 17 0.00037 29.5 3.9 43 128-197 67-109 (155)
239 PLN02165 adenylate isopentenyl 52.8 93 0.002 28.5 8.4 36 97-137 42-77 (334)
240 PF04083 Abhydro_lipase: Parti 52.0 11 0.00024 25.6 1.8 20 95-114 41-60 (63)
241 PF11713 Peptidase_C80: Peptid 49.6 20 0.00043 29.0 3.3 43 156-198 72-116 (157)
242 PF09994 DUF2235: Uncharacteri 48.5 1.9E+02 0.0041 25.4 9.7 37 169-206 76-112 (277)
243 PRK14729 miaA tRNA delta(2)-is 44.4 1.6E+02 0.0035 26.4 8.5 87 98-194 4-101 (300)
244 PF02590 SPOUT_MTase: Predicte 44.1 21 0.00045 28.9 2.6 52 127-206 66-117 (155)
245 PRK00103 rRNA large subunit me 44.1 32 0.00069 27.9 3.7 44 128-197 67-110 (157)
246 PF01972 SDH_sah: Serine dehyd 43.5 1E+02 0.0022 27.5 6.9 83 118-215 38-125 (285)
247 PF06792 UPF0261: Uncharacteri 39.3 3.3E+02 0.0073 25.6 11.1 110 101-215 4-124 (403)
248 KOG2521 Uncharacterized conser 38.7 1.3E+02 0.0028 27.7 7.1 109 96-222 37-153 (350)
249 PF04301 DUF452: Protein of un 38.0 49 0.0011 28.3 4.0 33 186-220 57-89 (213)
250 PF12242 Eno-Rase_NADH_b: NAD( 36.8 1.1E+02 0.0024 21.8 5.0 42 168-209 21-63 (78)
251 PF08484 Methyltransf_14: C-me 36.3 1.1E+02 0.0025 24.6 5.8 48 164-215 51-98 (160)
252 PF10081 Abhydrolase_9: Alpha/ 34.6 61 0.0013 29.0 4.1 37 185-221 108-147 (289)
253 COG3887 Predicted signaling pr 33.2 4E+02 0.0087 26.5 9.7 96 96-209 257-368 (655)
254 COG2069 CdhD CO dehydrogenase/ 32.6 98 0.0021 28.1 5.1 54 119-195 155-208 (403)
255 COG0149 TpiA Triosephosphate i 31.4 3.6E+02 0.0078 23.6 9.2 72 130-222 161-236 (251)
256 PHA02595 tk.4 hypothetical pro 30.9 31 0.00067 27.6 1.6 18 193-210 29-46 (154)
257 PF00091 Tubulin: Tubulin/FtsZ 30.9 1.1E+02 0.0024 25.6 5.1 51 165-217 105-163 (216)
258 PRK02399 hypothetical protein; 30.7 1.6E+02 0.0036 27.6 6.5 111 100-215 5-126 (406)
259 PF07992 Pyr_redox_2: Pyridine 30.0 67 0.0015 25.7 3.6 28 187-214 1-28 (201)
260 PRK00042 tpiA triosephosphate 29.9 3.7E+02 0.0081 23.4 8.3 82 129-238 160-246 (250)
261 PLN02429 triosephosphate isome 29.7 4E+02 0.0086 24.2 8.6 33 187-221 264-296 (315)
262 PF01494 FAD_binding_3: FAD bi 28.8 68 0.0015 27.9 3.6 24 187-210 3-26 (356)
263 cd07207 Pat_ExoU_VipD_like Exo 28.3 89 0.0019 25.3 4.0 34 172-208 16-49 (194)
264 COG2230 Cfa Cyclopropane fatty 27.4 1.9E+02 0.0041 25.9 6.1 43 175-218 62-105 (283)
265 TIGR00246 tRNA_RlmH_YbeA rRNA 27.1 1E+02 0.0022 24.8 4.0 43 128-197 65-107 (153)
266 PF02230 Abhydrolase_2: Phosph 26.6 2.2E+02 0.0049 23.4 6.3 60 97-176 155-214 (216)
267 PRK13512 coenzyme A disulfide 26.2 98 0.0021 28.9 4.4 31 187-217 3-33 (438)
268 cd07212 Pat_PNPLA9 Patatin-lik 25.5 1.1E+02 0.0023 27.6 4.2 19 189-207 35-53 (312)
269 KOG2385 Uncharacterized conser 25.0 1.9E+02 0.004 28.4 5.8 42 184-225 445-491 (633)
270 PF08386 Abhydrolase_4: TAP-li 24.9 2E+02 0.0044 21.0 5.1 41 98-142 35-76 (103)
271 KOG1643 Triosephosphate isomer 24.0 1.1E+02 0.0024 26.2 3.7 58 162-221 176-235 (247)
272 PF13552 DUF4127: Protein of u 23.9 1.7E+02 0.0036 28.3 5.5 62 117-192 49-110 (497)
273 PF01872 RibD_C: RibD C-termin 23.5 2E+02 0.0044 23.4 5.4 48 169-224 122-169 (200)
274 cd01714 ETF_beta The electron 22.5 4.2E+02 0.0091 22.0 7.1 21 187-207 110-134 (202)
275 KOG3079 Uridylate kinase/adeny 22.1 1.4E+02 0.0029 25.2 3.9 30 96-130 6-35 (195)
276 PRK09754 phenylpropionate diox 22.0 1.7E+02 0.0036 26.8 5.0 31 186-216 4-34 (396)
277 PRK06475 salicylate hydroxylas 21.3 1.2E+02 0.0025 27.8 3.8 23 186-208 3-25 (400)
278 cd07198 Patatin Patatin-like p 20.9 1.5E+02 0.0033 23.6 4.0 33 173-208 16-48 (172)
279 cd07225 Pat_PNPLA6_PNPLA7 Pata 20.9 1.3E+02 0.0028 27.0 3.9 33 173-208 33-65 (306)
280 PRK11460 putative hydrolase; P 20.6 4.7E+02 0.01 21.9 7.2 42 96-138 147-188 (232)
281 TIGR03219 salicylate_mono sali 20.6 1.1E+02 0.0024 28.0 3.6 23 187-209 2-24 (414)
282 PF14606 Lipase_GDSL_3: GDSL-l 20.2 3E+02 0.0064 22.8 5.6 29 162-192 72-100 (178)
283 PF14253 AbiH: Bacteriophage a 20.2 53 0.0011 28.2 1.2 19 186-204 235-253 (270)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=5.1e-53 Score=378.35 Aligned_cols=185 Identities=52% Similarity=0.980 Sum_probs=176.4
Q ss_pred CCCceeeEEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeE
Q 025941 52 SKDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALL 131 (246)
Q Consensus 52 ~~~~~~~~~~q~lDhf~~~~~~~~tF~qry~~~~~~~~~g~~~~~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~v 131 (246)
..+++++||+|+||||+|. ++.||.|||++|++||++| ++|||+|.|+||+++++..++|++.|+|.++++.+
T Consensus 42 ~~~ye~~yf~q~LDHFsF~--~~~tF~qRylin~~fw~~g-----~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~All 114 (492)
T KOG2183|consen 42 EYNYETRYFQQPLDHFSFT--DNKTFDQRYLINDDFWKKG-----EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALL 114 (492)
T ss_pred cccceeEEeeccccccccc--CccceeeEEEEecccccCC-----CCceEEEeCCcccHHHHHhccchHHhhhHhhCceE
Confidence 5678999999999999997 6899999999999999873 49999999999999999999999999999999999
Q ss_pred EEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCce
Q 025941 132 VYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAA 211 (246)
Q Consensus 132 v~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v 211 (246)
|+.||||||+|.|+++. ++++.+.++|+|+||+++|++.+++.+|++++.+..|||++|+|||||||+|||+||||.|
T Consensus 115 VFaEHRyYGeS~PFG~~--s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv 192 (492)
T KOG2183|consen 115 VFAEHRYYGESLPFGSQ--SYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIV 192 (492)
T ss_pred EEeehhccccCCCCcch--hccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhh
Confidence 99999999999999976 6778889999999999999999999999999888999999999999999999999999999
Q ss_pred eEEEEecCcccccCCCCCchhhHHHHHHHHHhhh
Q 025941 212 LGALASSAPILYFDDITPQNGYYSIVTRDFRVIY 245 (246)
Q Consensus 212 ~g~v~ssapv~~~~~~~~~~~y~~~v~~~~~~~~ 245 (246)
.|++++||||++++|.+|...|+++|++||+++.
T Consensus 193 ~GAlAaSAPvl~f~d~vp~~~f~~ivT~~F~~as 226 (492)
T KOG2183|consen 193 LGALAASAPVLYFEDTVPKDVFYRIVTRDFKDAS 226 (492)
T ss_pred hhhhhccCceEeecCCCCcchhhhHHHHHHHhhc
Confidence 9999999999999999999999999999999874
No 2
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=9.5e-44 Score=331.59 Aligned_cols=166 Identities=51% Similarity=0.838 Sum_probs=133.7
Q ss_pred eecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccC
Q 025941 62 QTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGK 141 (246)
Q Consensus 62 q~lDhf~~~~~~~~tF~qry~~~~~~~~~g~~~~~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~ 141 (246)
|+||||+ +.+.+||+|||++|++||++ ++||||+.|||++++.+....+++.++|+++|+.||++||||||+
T Consensus 1 Q~lDHf~--~~~~~tf~qRY~~n~~~~~~------~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~ 72 (434)
T PF05577_consen 1 QPLDHFN--PSNNGTFSQRYWVNDQYYKP------GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGK 72 (434)
T ss_dssp EES-SS---SSTT-EEEEEEEEE-TT--T------TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTT
T ss_pred CCCCCCC--CCCCCeEEEEEEEEhhhcCC------CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcC
Confidence 8999999 44679999999999999977 399999999999998877777899999999999999999999999
Q ss_pred CCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 142 SIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYN-ARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 142 S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~-~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
|.|+++.+ .++++|||++|+++|++.|++++++++. .++.|||++|+||||+||+|+|.||||+|.|+|+||||
T Consensus 73 S~P~~~~s-----~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 73 SQPFGDLS-----TENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp B-TTGGGG-----GSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--
T ss_pred CCCccccc-----hhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccce
Confidence 99998763 4799999999999999999999998764 46789999999999999999999999999999999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHh
Q 025941 221 ILYFDDITPQNGYYSIVTRDFRV 243 (246)
Q Consensus 221 v~~~~~~~~~~~y~~~v~~~~~~ 243 (246)
|.++.|+. +|++.|+++++.
T Consensus 148 v~a~~df~---~y~~~v~~~~~~ 167 (434)
T PF05577_consen 148 VQAKVDFW---EYFEVVTESLRK 167 (434)
T ss_dssp CCHCCTTT---HHHHHHHHHHHC
T ss_pred eeeecccH---HHHHHHHHHHHh
Confidence 99998886 999999998865
No 3
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=298.41 Aligned_cols=176 Identities=36% Similarity=0.592 Sum_probs=153.0
Q ss_pred CCCceeeEEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCcchh--hhHHHHHHHHHcCC
Q 025941 52 SKDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDIS--VIGFLTDNAARFNA 129 (246)
Q Consensus 52 ~~~~~~~~~~q~lDhf~~~~~~~~tF~qry~~~~~~~~~g~~~~~~~pI~l~~Gg~~~~~~~~~--~~g~~~~~a~~~g~ 129 (246)
.+++++.||+|++|||+ ++.+.|.|||+++..+|.. +++||||++||||.....|. ....+.++|+++|+
T Consensus 48 ~~~~~~~~~~Q~lDhF~---~~~~~~~Qq~~y~n~~~~~-----~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA 119 (514)
T KOG2182|consen 48 PANVEQSTFTQKLDHFD---SSNGKFFQQRFYNNNQWAK-----PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGA 119 (514)
T ss_pred cccccccchhhhhhhhh---cchhhhhhhheeecccccc-----CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCC
Confidence 67889999999999995 2456777777777777733 57999999999999884332 23477899999999
Q ss_pred eEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCC-CCEEEEecChHHHHHHHHHHHCC
Q 025941 130 LLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARH-SPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 130 ~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~-~pvil~G~S~GG~laa~~~~~yP 208 (246)
.|+.+|||+||+|.|.++.+ .++++|++++|+++|+++||+.++.+++..+ .|||.+|+||.|+|++|+|++||
T Consensus 120 ~v~~lEHRFYG~S~P~~~~s-----t~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP 194 (514)
T KOG2182|consen 120 TVFQLEHRFYGQSSPIGDLS-----TSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYP 194 (514)
T ss_pred eeEEeeeeccccCCCCCCCc-----ccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCc
Confidence 99999999999999988763 4679999999999999999999999987543 59999999999999999999999
Q ss_pred CceeEEEEecCcccccCCCCCchhhHHHHHHHHHh
Q 025941 209 HAALGALASSAPILYFDDITPQNGYYSIVTRDFRV 243 (246)
Q Consensus 209 ~~v~g~v~ssapv~~~~~~~~~~~y~~~v~~~~~~ 243 (246)
|++.|+|+|||||+++.|+. ||..+|++++++
T Consensus 195 el~~GsvASSapv~A~~DF~---EY~~VVe~s~~~ 226 (514)
T KOG2182|consen 195 ELTVGSVASSAPVLAKVDFY---EYLMVVEESLRR 226 (514)
T ss_pred hhheeecccccceeEEecHH---HHHHHHHHHHHh
Confidence 99999999999999998874 999999999975
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=99.80 E-value=1.8e-19 Score=163.32 Aligned_cols=156 Identities=28% Similarity=0.391 Sum_probs=126.5
Q ss_pred ceeeEEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEE
Q 025941 55 FQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYI 134 (246)
Q Consensus 55 ~~~~~~~q~lDhf~~~~~~~~tF~qry~~~~~~~~~g~~~~~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~ 134 (246)
+-..+|+||+||.+ | +.+||+||..+..+- ...|.||+..|.+-...- .-.+..+-.+++.+.+
T Consensus 31 ffvl~y~QPvDH~~--P-~~gtF~QRvtLlHk~--------~drPtV~~T~GY~~~~~p-----~r~Ept~Lld~NQl~v 94 (448)
T PF05576_consen 31 FFVLRYTQPVDHRH--P-EKGTFQQRVTLLHKD--------FDRPTVLYTEGYNVSTSP-----RRSEPTQLLDGNQLSV 94 (448)
T ss_pred EEEEeeecCCCCCC--C-CCCceEEEEEEEEcC--------CCCCeEEEecCcccccCc-----cccchhHhhccceEEE
Confidence 45567999999998 5 579999999988752 357888888666554321 1236666778999999
Q ss_pred ccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEE
Q 025941 135 EHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGA 214 (246)
Q Consensus 135 d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~ 214 (246)
||||||.|.|.+ .++.+||++|+..|...+++.+|..+ ..+||-.|.|-||+.+..++..||+.|++.
T Consensus 95 EhRfF~~SrP~p---------~DW~~Lti~QAA~D~Hri~~A~K~iY---~~kWISTG~SKGGmTa~y~rrFyP~DVD~t 162 (448)
T PF05576_consen 95 EHRFFGPSRPEP---------ADWSYLTIWQAASDQHRIVQAFKPIY---PGKWISTGGSKGGMTAVYYRRFYPDDVDGT 162 (448)
T ss_pred EEeeccCCCCCC---------CCcccccHhHhhHHHHHHHHHHHhhc---cCCceecCcCCCceeEEEEeeeCCCCCCee
Confidence 999999999853 57999999999999999999999887 357999999999999999999999999999
Q ss_pred EEecCccccc-CCCCCchhhHHHHH
Q 025941 215 LASSAPILYF-DDITPQNGYYSIVT 238 (246)
Q Consensus 215 v~ssapv~~~-~~~~~~~~y~~~v~ 238 (246)
|+..||.... .+......|.+.|+
T Consensus 163 VaYVAP~~~~~~eD~~y~~Fl~~VG 187 (448)
T PF05576_consen 163 VAYVAPNDVVNREDSRYDRFLEKVG 187 (448)
T ss_pred eeeecccccCcccchhHHHHHHhcC
Confidence 9999998643 23333456776665
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.68 E-value=9.3e-16 Score=139.08 Aligned_cols=110 Identities=23% Similarity=0.208 Sum_probs=83.9
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCC-CCHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGY-FNSAQAITDYAEIL 174 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~-lt~~q~l~D~a~~i 174 (246)
++++|+|+||..++...++. .+...++ +.|+.|+++|+||||+|.... ++ .+.++.++|+..++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~--~~~~~l~-~~g~~v~~~D~~G~G~S~~~~------------~~~~~~~~~~~dv~~~l 150 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFE--GIARKIA-SSGYGVFAMDYPGFGLSEGLH------------GYIPSFDDLVDDVIEHY 150 (349)
T ss_pred CCeEEEEECCCCCccchHHH--HHHHHHH-hCCCEEEEecCCCCCCCCCCC------------CCcCCHHHHHHHHHHHH
Confidence 45679999998777654332 2333443 468999999999999997421 11 35678889999998
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+.++.+...++.|++++||||||++++.++.++|+.+.++|+.++.
T Consensus 151 ~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 151 SKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 8887543334568999999999999999999999999999988754
No 6
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.67 E-value=1.3e-15 Score=133.53 Aligned_cols=127 Identities=22% Similarity=0.259 Sum_probs=96.6
Q ss_pred cccCCCCCCCCCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCC-CHH
Q 025941 86 KYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYF-NSA 164 (246)
Q Consensus 86 ~~~~~g~~~~~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~l-t~~ 164 (246)
++|.+..+.++.+-|+++||..++..+.+. -+.......|+.|+++||+|||.|.... +|. +.+
T Consensus 43 ~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~---~~a~~l~~~g~~v~a~D~~GhG~SdGl~------------~yi~~~d 107 (313)
T KOG1455|consen 43 QSWLPLSGTEPRGLVFLCHGYGEHSSWRYQ---STAKRLAKSGFAVYAIDYEGHGRSDGLH------------AYVPSFD 107 (313)
T ss_pred EecccCCCCCCceEEEEEcCCcccchhhHH---HHHHHHHhCCCeEEEeeccCCCcCCCCc------------ccCCcHH
Confidence 345442223567889999998888755432 2334444689999999999999998422 333 457
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCCCC
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFDDIT 228 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~~~~ 228 (246)
..++|+..+.+.++.+-..++.|.+++||||||++++.+..+.|+..+|+|++ ||++...+..
T Consensus 108 ~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilv-aPmc~i~~~~ 170 (313)
T KOG1455|consen 108 LVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILV-APMCKISEDT 170 (313)
T ss_pred HHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceee-ecccccCCcc
Confidence 88999999999988766667889999999999999999999999999999974 5666555443
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.64 E-value=2.8e-15 Score=134.52 Aligned_cols=111 Identities=17% Similarity=0.160 Sum_probs=83.3
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
++.|+|+||..++..+.+. .+.+...+.|+.|+++|+||||+|.+... ...+.+..++|+..+++.
T Consensus 59 ~~~VvllHG~~~~~~~~~~---~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-----------~~~~~~~~~~D~~~~i~~ 124 (330)
T PLN02298 59 RALIFMVHGYGNDISWTFQ---STAIFLAQMGFACFALDLEGHGRSEGLRA-----------YVPNVDLVVEDCLSFFNS 124 (330)
T ss_pred ceEEEEEcCCCCCcceehh---HHHHHHHhCCCEEEEecCCCCCCCCCccc-----------cCCCHHHHHHHHHHHHHH
Confidence 4458899998766533222 22222335689999999999999963210 123567889999999999
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
++......+.|++++||||||++++.++.++|+.|+++|+.+++.
T Consensus 125 l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 125 VKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 986543345689999999999999999999999999999887654
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.62 E-value=8.1e-15 Score=127.81 Aligned_cols=110 Identities=20% Similarity=0.228 Sum_probs=81.5
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
+++.||++||..++...|.. + .+...+.|+.|+++|+||||.|.+.. ....+....++|+...+.
T Consensus 24 ~~~~v~llHG~~~~~~~~~~---~-~~~l~~~g~~via~D~~G~G~S~~~~-----------~~~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 24 PKALVFISHGAGEHSGRYEE---L-AENISSLGILVFSHDHIGHGRSNGEK-----------MMIDDFGVYVRDVVQHVV 88 (276)
T ss_pred CCEEEEEeCCCccccchHHH---H-HHHHHhCCCEEEEccCCCCCCCCCcc-----------CCcCCHHHHHHHHHHHHH
Confidence 34445555998877766543 3 33334568999999999999997521 111244567888888887
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.+++.. +..|++++||||||++|..++.++|+.++++|+.++++.
T Consensus 89 ~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 89 TIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 776654 346899999999999999999999999999999887543
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.60 E-value=1.1e-14 Score=129.13 Aligned_cols=104 Identities=10% Similarity=0.079 Sum_probs=79.6
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+|+||..++...|.. ++..++ +.|+.|+++|+||||+|.+... ...++.++.++|++.++++
T Consensus 46 ~~~lvliHG~~~~~~~w~~---~~~~L~-~~gy~vi~~Dl~G~G~S~~~~~----------~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 46 GPPVLLLHGEPSWSYLYRK---MIPILA-AAGHRVIAPDLIGFGRSDKPTR----------REDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred CCEEEEECCCCCchhhHHH---HHHHHH-hCCCEEEEECCCCCCCCCCCCC----------cccCCHHHHHHHHHHHHHH
Confidence 4689999998877766543 333443 4578999999999999975321 1224667788888877766
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+. ..+++++||||||.+|..++.++|+.|.++++.++.
T Consensus 112 l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 112 LD------LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred cC------CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 42 246999999999999999999999999999987753
No 10
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.59 E-value=9.7e-15 Score=128.69 Aligned_cols=109 Identities=16% Similarity=0.121 Sum_probs=84.6
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+|+||..++...|.. .+..++++ +.|+++|+||||.|...... ..+....++.++.++|+..+++.
T Consensus 29 ~~~vlllHG~~~~~~~w~~---~~~~L~~~--~~vi~~DlpG~G~S~~~~~~-----~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRK---NTPVLAKS--HRVYAIDLLGYGYSDKPNPR-----SAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred CCeEEEECCCCCChhHHHH---HHHHHHhC--CeEEEEcCCCCCCCCCCccc-----cccccccCCHHHHHHHHHHHHHH
Confidence 4789999999998877654 44556554 49999999999999753210 00112346788888999988887
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+.. .|++++||||||++++.++.++|+.|.++|+.+++.
T Consensus 99 l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 99 VVG------DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred hcC------CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 642 469999999999999999999999999999987654
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.57 E-value=3.3e-14 Score=128.18 Aligned_cols=113 Identities=14% Similarity=0.043 Sum_probs=83.8
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
++++|+++||..++...|.. +...++ +.|+.|+++|+||||.|.+..+. .......+.+..++|+..+++
T Consensus 53 ~~~~vll~HG~~~~~~~y~~---~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~------~~~~~~~~~~~~~~d~~~~~~ 122 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAE---LAYDLF-HLGYDVLIIDHRGQGRSGRLLDD------PHRGHVERFNDYVDDLAAFWQ 122 (330)
T ss_pred CCcEEEEECCccchHHHHHH---HHHHHH-HCCCeEEEEcCCCCCCCCCCCCC------CCcCccccHHHHHHHHHHHHH
Confidence 45689999998776655443 333333 57899999999999999743110 011112367889999999998
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
.+.+.. +..|++++||||||++++.++.++|+.++++|+++++
T Consensus 123 ~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 123 QEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 876543 3468999999999999999999999999999987654
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.56 E-value=1.1e-14 Score=127.34 Aligned_cols=102 Identities=20% Similarity=0.262 Sum_probs=80.3
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+|+||..++...|.. ++..+.+ ++.|+++|+||||+|.... ...+.+...+|+.++++.
T Consensus 25 ~~plvllHG~~~~~~~w~~---~~~~L~~--~~~vi~~Dl~G~G~S~~~~------------~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVFP---FIEALDP--DLEVIAFDVPGVGGSSTPR------------HPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CCcEEEEeCCCcchHHHHH---HHHHhcc--CceEEEECCCCCCCCCCCC------------CcCcHHHHHHHHHHHHHH
Confidence 3699999998888776543 4444444 5799999999999996311 124667777888888877
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+.. .+++++||||||++++.++.++|+.|.++|+.+++.
T Consensus 88 l~~------~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 88 LDY------GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred hCc------CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 631 469999999999999999999999999999887664
No 13
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.56 E-value=3e-14 Score=117.17 Aligned_cols=102 Identities=23% Similarity=0.238 Sum_probs=80.8
Q ss_pred EEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHH
Q 025941 100 IFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKE 179 (246)
Q Consensus 100 I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~ 179 (246)
|+|+||+.++...|.. ++..++ .|+.|+++|+||||.|.+.. .....+.++.++|+.++++.+..
T Consensus 1 vv~~hG~~~~~~~~~~---~~~~l~--~~~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDP---LAEALA--RGYRVIAFDLPGHGRSDPPP----------DYSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGGHH---HHHHHH--TTSEEEEEECTTSTTSSSHS----------SGSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHHHH---HHHHHh--CCCEEEEEecCCcccccccc----------ccCCcchhhhhhhhhhccccccc
Confidence 7899999999876654 444453 58899999999999998532 12235678888888888776543
Q ss_pred HcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 180 KYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 180 ~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.|++++|||+||.+++.++.++|+.|.++++.+++..
T Consensus 66 ------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 ------KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp ------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ------ccccccccccccccccccccccccccccceeeccccc
Confidence 5799999999999999999999999999999887764
No 14
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.55 E-value=3.9e-14 Score=121.42 Aligned_cols=105 Identities=17% Similarity=0.192 Sum_probs=80.3
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+++||+.+....++. .+..++.+.|+.|+++|+||+|.|..... .....+.++.++|+..+++.
T Consensus 25 ~~~vl~~hG~~g~~~~~~~---~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLE---NLRELLKEEGREVIMYDQLGCGYSDQPDD---------SDELWTIDYFVDELEEVREK 92 (288)
T ss_pred CCeEEEEcCCCCccHHHHH---HHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------ccccccHHHHHHHHHHHHHH
Confidence 5789999998877655543 45566666689999999999999974211 11135778888887777665
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
+. ..+++++||||||.++..++.++|+.+.++++.++
T Consensus 93 ~~------~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 93 LG------LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred cC------CCcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 42 23599999999999999999999999999997664
No 15
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.55 E-value=3.2e-14 Score=127.07 Aligned_cols=108 Identities=24% Similarity=0.298 Sum_probs=86.4
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCC-CHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYF-NSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~l-t~~q~l~D~a~~i~ 175 (246)
.+.|+++||..+....|.. +.+.....|+.|+++||||||.|.. + ..++. +.++.+.|+..+++
T Consensus 34 ~g~Vvl~HG~~Eh~~ry~~----la~~l~~~G~~V~~~D~RGhG~S~r-~----------~rg~~~~f~~~~~dl~~~~~ 98 (298)
T COG2267 34 KGVVVLVHGLGEHSGRYEE----LADDLAARGFDVYALDLRGHGRSPR-G----------QRGHVDSFADYVDDLDAFVE 98 (298)
T ss_pred CcEEEEecCchHHHHHHHH----HHHHHHhCCCEEEEecCCCCCCCCC-C----------CcCCchhHHHHHHHHHHHHH
Confidence 3789999999888877653 3444457899999999999999973 1 11223 25778899999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
.+.+.. .+.|++++||||||.|++.++..+|+.++++|++|+-+
T Consensus 99 ~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 99 TIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred HHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccc
Confidence 887653 56799999999999999999999999999999876543
No 16
>PLN02965 Probable pheophorbidase
Probab=99.55 E-value=4.6e-14 Score=122.17 Aligned_cols=103 Identities=17% Similarity=-0.001 Sum_probs=78.6
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
..|+|+||...+...|.. .+..++ +.++.|+++|+||||+|.... ....+.++..+|+.++++.+
T Consensus 4 ~~vvllHG~~~~~~~w~~---~~~~L~-~~~~~via~Dl~G~G~S~~~~-----------~~~~~~~~~a~dl~~~l~~l 68 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYK---LATLLD-AAGFKSTCVDLTGAGISLTDS-----------NTVSSSDQYNRPLFALLSDL 68 (255)
T ss_pred eEEEEECCCCCCcCcHHH---HHHHHh-hCCceEEEecCCcCCCCCCCc-----------cccCCHHHHHHHHHHHHHhc
Confidence 569999999887766543 334443 447899999999999996311 11346777888888888764
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
.. ..+++++||||||+++..++.++|+.|.++|+.++.
T Consensus 69 ~~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 69 PP-----DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred CC-----CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 21 147999999999999999999999999999986654
No 17
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.54 E-value=3.9e-14 Score=124.86 Aligned_cols=102 Identities=15% Similarity=0.033 Sum_probs=81.3
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+|+||..++...|.. .+..+++++ .|+++|+||||.|.... ...+.+..++|+..+++.
T Consensus 27 g~~vvllHG~~~~~~~w~~---~~~~L~~~~--~via~D~~G~G~S~~~~------------~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRN---IIPHLAGLG--RCLAPDLIGMGASDKPD------------IDYTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEECCCCCCHHHHHH---HHHHHhhCC--EEEEEcCCCCCCCCCCC------------CCCCHHHHHHHHHHHHHH
Confidence 4799999999888776653 445555543 99999999999997421 114677888888888877
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+.. .+++++||||||.+|+.++.++|+.|+++++.+++.
T Consensus 90 l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 90 LGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred hCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 632 469999999999999999999999999999888744
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.54 E-value=4.2e-14 Score=121.15 Aligned_cols=99 Identities=21% Similarity=0.160 Sum_probs=79.3
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.||+++||..++...|.. +...+++ ++.|+++|+||||+|.+.. .++.++.++|+.++++
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~---~~~~l~~--~~~vi~~D~~G~G~s~~~~-------------~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGV---LARDLVN--DHDIIQVDMRNHGLSPRDP-------------VMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCCEEEECCCCCchhHHHH---HHHHHhh--CCeEEEECCCCCCCCCCCC-------------CCCHHHHHHHHHHHHH
Confidence 46799999999888765543 4455554 5699999999999997521 1467888899998887
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASS 218 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ss 218 (246)
.+. ..+++++||||||++++.++.++|+.|.++++.+
T Consensus 77 ~l~------~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~ 113 (255)
T PRK10673 77 ALQ------IEKATFIGHSMGGKAVMALTALAPDRIDKLVAID 113 (255)
T ss_pred HcC------CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEe
Confidence 752 2469999999999999999999999999998764
No 19
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.52 E-value=6.6e-14 Score=126.67 Aligned_cols=118 Identities=17% Similarity=0.111 Sum_probs=84.7
Q ss_pred CCCCcEEEEeCCCCCCCc-ch---------------------hhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhh
Q 025941 95 DANAPIFVYLGAEESLDG-DI---------------------SVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEAL 152 (246)
Q Consensus 95 ~~~~pI~l~~Gg~~~~~~-~~---------------------~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~ 152 (246)
++++.|+++||..++... +. ...+.+.+...+.|+.|+++||||||+|....
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~------ 92 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQ------ 92 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCcccc------
Confidence 457889999998887752 11 11123445555679999999999999997421
Q ss_pred ccccccCC-CCHHHHHHHHHHHHHHHHHHc-----------------CCC-CCCEEEEecChHHHHHHHHHHHCCC----
Q 025941 153 KNASTLGY-FNSAQAITDYAEILLYIKEKY-----------------NAR-HSPVIVIGGSYGGMLAAWFRLKYPH---- 209 (246)
Q Consensus 153 ~~~~~l~~-lt~~q~l~D~a~~i~~l~~~~-----------------~~~-~~pvil~G~S~GG~laa~~~~~yP~---- 209 (246)
...++ -+.++.++|+..+++.+++.. ..+ +.|++++||||||.+++.++.++++
T Consensus 93 ---~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~ 169 (332)
T TIGR01607 93 ---NLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN 169 (332)
T ss_pred ---ccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc
Confidence 11222 356888999999999887621 112 5799999999999999999887753
Q ss_pred ----ceeEEEEecCcc
Q 025941 210 ----AALGALASSAPI 221 (246)
Q Consensus 210 ----~v~g~v~ssapv 221 (246)
.+.|+|++|+++
T Consensus 170 ~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 170 NDKLNIKGCISLSGMI 185 (332)
T ss_pred ccccccceEEEeccce
Confidence 578888777665
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.50 E-value=8.4e-14 Score=121.17 Aligned_cols=106 Identities=12% Similarity=0.097 Sum_probs=74.0
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+++||..++...|......+..++ +.|+.|+++|+||||+|.+... +. .......+|+.++++.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~--------~~---~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFV-DAGYRVILKDSPGFNKSDAVVM--------DE---QRGLVNARAVKGLMDA 97 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHH-hCCCEEEEECCCCCCCCCCCcC--------cc---cccchhHHHHHHHHHH
Confidence 4689999998777655432112233333 3478999999999999975311 00 0111234666666655
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+. ..+++++||||||+++..++.++|+.+.++|+.+++
T Consensus 98 l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 98 LD------IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred cC------CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 42 247999999999999999999999999999987754
No 21
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.50 E-value=3.5e-13 Score=118.50 Aligned_cols=111 Identities=14% Similarity=0.017 Sum_probs=81.4
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
.++|+++||..++...+......+.+...+.|+.|+.+|+||||.|.... ...+.++.++|+..+++.
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~------------~~~~~~~~~~Dv~~ai~~ 92 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF------------AAARWDVWKEDVAAAYRW 92 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc------------ccCCHHHHHHHHHHHHHH
Confidence 45688999876654433221122333334579999999999999996421 113566788999998888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
+++. . ..|++++||||||.+++.++.++|+.+.++|+.++++.
T Consensus 93 L~~~-~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 93 LIEQ-G--HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHhc-C--CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 8764 2 45899999999999999999999999999998775443
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.49 E-value=1.4e-13 Score=118.66 Aligned_cols=103 Identities=17% Similarity=0.067 Sum_probs=78.6
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.+|+++||..++...|.. ++..+++ ++.|+++|+||||.|.+... ...+.+..++|+.++++.
T Consensus 28 ~~~vv~~hG~~~~~~~~~~---~~~~l~~--~~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 28 GPLLLLLHGTGASTHSWRD---LMPPLAR--SFRVVAPDLPGHGFTRAPFR-----------FRFTLPSMAEDLSALCAA 91 (278)
T ss_pred CCeEEEEcCCCCCHHHHHH---HHHHHhh--CcEEEeecCCCCCCCCCccc-----------cCCCHHHHHHHHHHHHHH
Confidence 4689999998887766543 4445554 57999999999999975211 124677888888877765
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+. ..+++++||||||++++.++.++|+.++++++.+++.
T Consensus 92 ~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 92 EG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 32 2468999999999999999999999999888776543
No 23
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.48 E-value=3.3e-13 Score=118.81 Aligned_cols=105 Identities=12% Similarity=0.039 Sum_probs=78.1
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.+|+|+||..++.+.|.. +.+..++.|+.|+++|+||||+|.+.. ....+.++.++|+..+++
T Consensus 17 ~~p~vvliHG~~~~~~~w~~----~~~~L~~~g~~vi~~dl~g~G~s~~~~-----------~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYK----IRCLMENSGYKVTCIDLKSAGIDQSDA-----------DSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred CCCeEEEECCCCCCcCcHHH----HHHHHHhCCCEEEEecccCCCCCCCCc-----------ccCCCHHHHHHHHHHHHH
Confidence 34579999998888776543 233333468999999999999885321 122466777777777766
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
.+. ...+++++||||||+++..++.++|+.|.++|..++.
T Consensus 82 ~l~-----~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 82 SLP-----ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred hcC-----CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 542 1357999999999999999999999999999987653
No 24
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.47 E-value=1.9e-13 Score=115.59 Aligned_cols=101 Identities=19% Similarity=0.149 Sum_probs=77.5
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.+|+++||..++...|.. .+..+. .++.|+++|+||||.|.... ...++.++.++|+.++++.
T Consensus 13 ~~~iv~lhG~~~~~~~~~~---~~~~l~--~~~~vi~~D~~G~G~S~~~~-----------~~~~~~~~~~~~~~~~i~~ 76 (257)
T TIGR03611 13 APVVVLSSGLGGSGSYWAP---QLDVLT--QRFHVVTYDHRGTGRSPGEL-----------PPGYSIAHMADDVLQLLDA 76 (257)
T ss_pred CCEEEEEcCCCcchhHHHH---HHHHHH--hccEEEEEcCCCCCCCCCCC-----------cccCCHHHHHHHHHHHHHH
Confidence 4578899999888765543 333333 36899999999999996421 1224678888888888876
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
++ ..+++++||||||+++..++.++|+.+.++|+.++
T Consensus 77 ~~------~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 77 LN------IERFHFVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred hC------CCcEEEEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 53 24699999999999999999999999999987665
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.46 E-value=3.2e-13 Score=114.95 Aligned_cols=99 Identities=15% Similarity=0.053 Sum_probs=75.4
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
.||+++||..++...|.. .+..+ + ++.|+++|+||||.|.+.. . .+.++.++|+.++++.+
T Consensus 3 p~vvllHG~~~~~~~w~~---~~~~l-~--~~~vi~~D~~G~G~S~~~~------------~-~~~~~~~~~l~~~l~~~ 63 (242)
T PRK11126 3 PWLVFLHGLLGSGQDWQP---VGEAL-P--DYPRLYIDLPGHGGSAAIS------------V-DGFADVSRLLSQTLQSY 63 (242)
T ss_pred CEEEEECCCCCChHHHHH---HHHHc-C--CCCEEEecCCCCCCCCCcc------------c-cCHHHHHHHHHHHHHHc
Confidence 569999999888876643 23322 2 5799999999999997421 1 15677778887777654
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc-eeEEEEecCcc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHA-ALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~-v~g~v~ssapv 221 (246)
...+++++||||||.+|+.++.++|+. |+++++.+++.
T Consensus 64 ------~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 64 ------NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred ------CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 235799999999999999999999765 99999876553
No 26
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.46 E-value=2.7e-13 Score=120.72 Aligned_cols=104 Identities=19% Similarity=0.225 Sum_probs=75.1
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+++||++++.... . +.+.....++.|+++|+||||.|.+... ....+.++.++|+..++++
T Consensus 27 ~~~lvllHG~~~~~~~~-~----~~~~~~~~~~~vi~~D~~G~G~S~~~~~----------~~~~~~~~~~~dl~~l~~~ 91 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-G----CRRFFDPETYRIVLFDQRGCGKSTPHAC----------LEENTTWDLVADIEKLREK 91 (306)
T ss_pred CCEEEEECCCCCCCCCH-H----HHhccCccCCEEEEECCCCCCCCCCCCC----------cccCCHHHHHHHHHHHHHH
Confidence 56899999988775432 1 1122223468999999999999975321 1113456777777766655
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
++ ..+++++||||||++++.++.++|+.+.++|+.++.+
T Consensus 92 l~------~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 LG------IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred cC------CCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 42 2469999999999999999999999999999877654
No 27
>PLN02511 hydrolase
Probab=99.46 E-value=5.2e-13 Score=123.28 Aligned_cols=108 Identities=15% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCcEEEEeCCCCCCCc-chhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDG-DISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~-~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
+++|+++||.+++... |.. .+...+.+.|+.|+++|+||||.|..... ++ ......+|+..+++
T Consensus 100 ~p~vvllHG~~g~s~~~y~~---~~~~~~~~~g~~vv~~d~rG~G~s~~~~~-----------~~-~~~~~~~Dl~~~i~ 164 (388)
T PLN02511 100 APVLILLPGLTGGSDDSYVR---HMLLRARSKGWRVVVFNSRGCADSPVTTP-----------QF-YSASFTGDLRQVVD 164 (388)
T ss_pred CCEEEEECCCCCCCCCHHHH---HHHHHHHHCCCEEEEEecCCCCCCCCCCc-----------CE-EcCCchHHHHHHHH
Confidence 3458899999887654 221 22333446799999999999999964211 11 12345679999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc--eeEEEEecCcc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHA--ALGALASSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~--v~g~v~ssapv 221 (246)
+++.++ ++.|++++||||||++++.++.++|+. +.++++.++|.
T Consensus 165 ~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 165 HVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred HHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 999876 456899999999999999999999987 88888888876
No 28
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.46 E-value=3.5e-13 Score=116.21 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=69.4
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIK 178 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~ 178 (246)
||+|+||..++...|.. ++..+.+ .+.|+++|+||||.|... + ..+.++.++|+.+
T Consensus 15 ~ivllHG~~~~~~~w~~---~~~~L~~--~~~vi~~Dl~G~G~S~~~----------~---~~~~~~~~~~l~~------ 70 (256)
T PRK10349 15 HLVLLHGWGLNAEVWRC---IDEELSS--HFTLHLVDLPGFGRSRGF----------G---ALSLADMAEAVLQ------ 70 (256)
T ss_pred eEEEECCCCCChhHHHH---HHHHHhc--CCEEEEecCCCCCCCCCC----------C---CCCHHHHHHHHHh------
Confidence 59999998888876643 4444544 479999999999999631 1 1355555555432
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 179 EKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 179 ~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
.. ..+++++||||||.+|..++.++|+.+.++++.++
T Consensus 71 --~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 71 --QA--PDKAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred --cC--CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 11 24699999999999999999999999999997654
No 29
>PRK06489 hypothetical protein; Provisional
Probab=99.46 E-value=1.5e-12 Score=118.66 Aligned_cols=112 Identities=16% Similarity=0.195 Sum_probs=73.2
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHH------HHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNA------ARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDY 170 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a------~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~ 170 (246)
+.||+|+||+.++...|+. ..+...+. ...++.|+++|+||||+|....+. ...+...++.++.++|+
T Consensus 69 gpplvllHG~~~~~~~~~~-~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~-----~~~~~~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLS-PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG-----LRAAFPRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCCchhhhcc-chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC-----CCCCCCcccHHHHHHHH
Confidence 5689999999988765541 01222220 023579999999999999642110 00011124666666666
Q ss_pred HHHHHHHHHHcCCCCCCE-EEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 171 AEILLYIKEKYNARHSPV-IVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 171 a~~i~~l~~~~~~~~~pv-il~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
..++ .++++. .++ +++||||||++|+.++.+||+.|.++|+.++
T Consensus 143 ~~~l---~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 143 YRLV---TEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HHHH---HHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 5543 222322 245 5899999999999999999999999997654
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.45 E-value=6.6e-13 Score=110.71 Aligned_cols=102 Identities=20% Similarity=0.231 Sum_probs=74.7
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHH-HHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITD-YAEILLY 176 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D-~a~~i~~ 176 (246)
.+|+++||..++...|.. +...++ .++.|+++|+||||.|.... .....+.++.++| +..+++.
T Consensus 2 ~~vv~~hG~~~~~~~~~~---~~~~L~--~~~~v~~~d~~g~G~s~~~~----------~~~~~~~~~~~~~~~~~~~~~ 66 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQA---LIELLG--PHFRCLAIDLPGHGSSQSPD----------EIERYDFEEAAQDILATLLDQ 66 (251)
T ss_pred CEEEEEcCCCCchhhHHH---HHHHhc--ccCeEEEEcCCCCCCCCCCC----------ccChhhHHHHHHHHHHHHHHH
Confidence 579999998888776543 334443 47899999999999996321 1122455666666 4444433
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+ +..+++++||||||.+++.++.++|+.+.++++.+++
T Consensus 67 ~------~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 67 L------GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred c------CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 3 2357999999999999999999999999999987653
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.45 E-value=1.2e-12 Score=121.41 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=73.9
Q ss_pred CCCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHH
Q 025941 95 DANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEIL 174 (246)
Q Consensus 95 ~~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i 174 (246)
+.+.||+++||..++...|.. .+..+++ ++.|+++|+||||.|.... ..+.+.+++.+++...+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~---~~~~L~~--~~~vi~~D~rG~G~S~~~~-----------~~~~~~~~~~~~~~~~i 166 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFR---NFDALAS--RFRVIAIDQLGWGGSSRPD-----------FTCKSTEETEAWFIDSF 166 (402)
T ss_pred CCCCEEEEECCCCcchhHHHH---HHHHHHh--CCEEEEECCCCCCCCCCCC-----------cccccHHHHHHHHHHHH
Confidence 345789999998877665543 3445554 4799999999999996421 01112233333333223
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
....+... ..+++++||||||.+|+.++.++|+.|.++|+.+++.
T Consensus 167 ~~~~~~l~--~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 167 EEWRKAKN--LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHcC--CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 33333332 2479999999999999999999999999999876543
No 32
>PLN02578 hydrolase
Probab=99.44 E-value=9.8e-13 Score=119.76 Aligned_cols=100 Identities=17% Similarity=0.143 Sum_probs=77.7
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+++||..++...|.. .+..+++ ++.|+++|+||||.|.... ..++.+...+|+..+++.
T Consensus 86 g~~vvliHG~~~~~~~w~~---~~~~l~~--~~~v~~~D~~G~G~S~~~~------------~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRY---NIPELAK--KYKVYALDLLGFGWSDKAL------------IEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CCeEEEECCCCCCHHHHHH---HHHHHhc--CCEEEEECCCCCCCCCCcc------------cccCHHHHHHHHHHHHHH
Confidence 4789999998887655543 3445554 5799999999999997421 124667777888888876
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
+. ..|++++||||||.++..++.++|+.|+++++.++
T Consensus 149 ~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 149 VV------KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred hc------cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 64 24699999999999999999999999999997654
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.44 E-value=9.4e-13 Score=121.93 Aligned_cols=107 Identities=18% Similarity=0.212 Sum_probs=80.4
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCC-CCHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGY-FNSAQAITDYAEIL 174 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~-lt~~q~l~D~a~~i 174 (246)
++++|+++||..++...|.. +...+ .+.|+.|+++|+||||+|.... ++ .+.++.++|+..++
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~---~a~~L-~~~Gy~V~~~D~rGhG~S~~~~------------~~~~~~~~~~~Dl~~~l 198 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLH---FAKQL-TSCGFGVYAMDWIGHGGSDGLH------------GYVPSLDYVVEDTEAFL 198 (395)
T ss_pred CceEEEEECCchHHHHHHHH---HHHHH-HHCCCEEEEeCCCCCCCCCCCC------------CCCcCHHHHHHHHHHHH
Confidence 45688899998877654432 33333 3569999999999999997421 12 25678889999999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEecCcc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH---AALGALASSAPI 221 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~---~v~g~v~ssapv 221 (246)
+.++.+. ++.|++++||||||.+++.++ .+|+ .+.++|+.|+.+
T Consensus 199 ~~l~~~~--~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 199 EKIRSEN--PGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHhC--CCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECccc
Confidence 9998765 345899999999999998776 4675 789999877654
No 34
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.44 E-value=5.5e-13 Score=121.77 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=78.2
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+|+||..++...|.. ++..+++ ++.|+++|+||||+|.+.. .. .++.+...+|+..+++.
T Consensus 88 gp~lvllHG~~~~~~~w~~---~~~~L~~--~~~via~Dl~G~G~S~~~~----------~~-~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRR---NIGVLAK--NYTVYAIDLLGFGASDKPP----------GF-SYTMETWAELILDFLEE 151 (360)
T ss_pred CCeEEEECCCCCCHHHHHH---HHHHHhc--CCEEEEECCCCCCCCCCCC----------Cc-cccHHHHHHHHHHHHHH
Confidence 4689999999888776554 3444443 6799999999999997421 11 24677778888888775
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHH-HCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRL-KYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~-~yP~~v~g~v~ssapv 221 (246)
+. ..|++++||||||.++..++. .+|+.|.++|+.+++.
T Consensus 152 l~------~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 152 VV------QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred hc------CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 53 247999999999999988876 5899999999887653
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.44 E-value=6.8e-13 Score=125.39 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=78.9
Q ss_pred CCcEEEEeCCCCCCCcchhh-hHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHH-HHH
Q 025941 97 NAPIFVYLGAEESLDGDISV-IGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYA-EIL 174 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~-~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a-~~i 174 (246)
+.||+|+||..++...|... ...+.+.+ +.++.|+++|+||||+|.... ...++.++.++|+. .++
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~-~~~yrVia~Dl~G~G~S~~p~-----------~~~ytl~~~a~~l~~~ll 268 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAA-KSTYRLFAVDLLGFGRSPKPA-----------DSLYTLREHLEMIERSVL 268 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHh-hCCCEEEEECCCCCCCCcCCC-----------CCcCCHHHHHHHHHHHHH
Confidence 46999999999887655421 12232222 357899999999999996421 12246677777774 455
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
+.+ + ..+++++||||||+++..++.+||+.|.++++.++|..
T Consensus 269 ~~l----g--~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 269 ERY----K--VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HHc----C--CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 443 2 34799999999999999999999999999999887653
No 36
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.42 E-value=3.9e-13 Score=112.50 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=75.1
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
.+||++||...+...|.. ++..+. .++.|+++|+||||+|.... ...+.++.++|+..+++.+
T Consensus 14 ~~li~~hg~~~~~~~~~~---~~~~l~--~~~~v~~~d~~G~G~s~~~~------------~~~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 14 PVLVFINSLGTDLRMWDP---VLPALT--PDFRVLRYDKRGHGLSDAPE------------GPYSIEDLADDVLALLDHL 76 (251)
T ss_pred CeEEEEcCcccchhhHHH---HHHHhh--cccEEEEecCCCCCCCCCCC------------CCCCHHHHHHHHHHHHHHh
Confidence 456777887666654432 333343 37899999999999995321 1246778888888777765
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
. ..+++++||||||++++.++.++|+.+.++++.+++.
T Consensus 77 ~------~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 77 G------IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred C------CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 3 2469999999999999999999999999999876543
No 37
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.42 E-value=6e-13 Score=118.96 Aligned_cols=105 Identities=21% Similarity=0.233 Sum_probs=74.0
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCH-HHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNS-AQAITDYAEIL 174 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~-~q~l~D~a~~i 174 (246)
.+.|++++||.++...-|.. -+.++++.+ .|+++|++|+|.|+... ++. ...+. ++.++- |
T Consensus 89 ~~~plVliHGyGAg~g~f~~---Nf~~La~~~--~vyaiDllG~G~SSRP~-----F~~----d~~~~e~~fves----i 150 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFR---NFDDLAKIR--NVYAIDLLGFGRSSRPK-----FSI----DPTTAEKEFVES----I 150 (365)
T ss_pred CCCcEEEEeccchhHHHHHH---hhhhhhhcC--ceEEecccCCCCCCCCC-----CCC----CcccchHHHHHH----H
Confidence 46899999998887766554 355677744 99999999999997421 000 01111 223333 3
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+.-+.+.+.+ +.+|+|||+||.||+.+++|||+.|..+|+.++-
T Consensus 151 E~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 151 EQWRKKMGLE--KMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred HHHHHHcCCc--ceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 3333444443 6999999999999999999999999999987753
No 38
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.41 E-value=1.2e-12 Score=120.75 Aligned_cols=108 Identities=11% Similarity=0.058 Sum_probs=84.0
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.||+|+||..++...|.. .+..+++ ++.|+++|+||||.|.+... .....++.++.++|+..+++
T Consensus 126 ~~~~ivllHG~~~~~~~w~~---~~~~L~~--~~~Via~DlpG~G~S~~p~~--------~~~~~ys~~~~a~~l~~~i~ 192 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRK---VLPVLSK--NYHAIAFDWLGFGFSDKPQP--------GYGFNYTLDEYVSSLESLID 192 (383)
T ss_pred CCCeEEEECCCCCCHHHHHH---HHHHHhc--CCEEEEECCCCCCCCCCCcc--------cccccCCHHHHHHHHHHHHH
Confidence 35689999999888776654 4444543 68999999999999975321 01123577888899888887
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.+.. .+++++|||+||+++..++.++|+.|.++|+++++..
T Consensus 193 ~l~~------~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 193 ELKS------DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HhCC------CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 7642 3699999999999999999999999999999887753
No 39
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.41 E-value=1.2e-12 Score=116.24 Aligned_cols=107 Identities=17% Similarity=0.202 Sum_probs=84.3
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.-|+++||.+.....|.. .+ ...+..|++|+++|+||||.|... +....+|.+..++|+..+++
T Consensus 43 ~gP~illlHGfPe~wyswr~---q~-~~la~~~~rviA~DlrGyG~Sd~P----------~~~~~Yt~~~l~~di~~lld 108 (322)
T KOG4178|consen 43 DGPIVLLLHGFPESWYSWRH---QI-PGLASRGYRVIAPDLRGYGFSDAP----------PHISEYTIDELVGDIVALLD 108 (322)
T ss_pred CCCEEEEEccCCccchhhhh---hh-hhhhhcceEEEecCCCCCCCCCCC----------CCcceeeHHHHHHHHHHHHH
Confidence 34456677898887665543 22 233355689999999999999853 23344688999999999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
++. ..+++++||+||+++|.+++..||+.|+|.+..+.|-.
T Consensus 109 ~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 109 HLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred Hhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 886 25799999999999999999999999999998877655
No 40
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.41 E-value=1.4e-12 Score=115.24 Aligned_cols=103 Identities=11% Similarity=0.052 Sum_probs=72.8
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||+|+||.......|.. .+..+.+ ++.|+++|+||||.|.... .. ..+.+...+|+..++++
T Consensus 34 ~~~iv~lHG~~~~~~~~~~---~~~~l~~--~~~vi~~D~~G~G~S~~~~----------~~-~~~~~~~~~~~~~~~~~ 97 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYRD---IIVALRD--RFRCVAPDYLGFGLSERPS----------GF-GYQIDEHARVIGEFVDH 97 (286)
T ss_pred CCEEEEECCCCccHHHHHH---HHHHHhC--CcEEEEECCCCCCCCCCCC----------cc-ccCHHHHHHHHHHHHHH
Confidence 4789999998755443332 3333333 5799999999999997421 11 13445555555555544
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
++ ..+++++||||||.++..++.++|+.|.++|+.+++.
T Consensus 98 ----~~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 98 ----LG--LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred ----hC--CCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 32 3569999999999999999999999999999876654
No 41
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.40 E-value=2.1e-12 Score=107.90 Aligned_cols=94 Identities=19% Similarity=0.185 Sum_probs=68.9
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
.||+++||..++...|.. ++..+++ ++.|+++|+||||.|.+.. ..+.++.++|+...
T Consensus 5 ~~iv~~HG~~~~~~~~~~---~~~~l~~--~~~vi~~d~~G~G~s~~~~-------------~~~~~~~~~~~~~~---- 62 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRC---LDEELSA--HFTLHLVDLPGHGRSRGFG-------------PLSLADAAEAIAAQ---- 62 (245)
T ss_pred ceEEEEcCCCCchhhHHH---HHHhhcc--CeEEEEecCCcCccCCCCC-------------CcCHHHHHHHHHHh----
Confidence 689999998887766543 3334433 5799999999999986421 12444444444322
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
. +.+++++||||||.+++.++.++|+.+.++|+.++
T Consensus 63 ---~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~ 98 (245)
T TIGR01738 63 ---A---PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVAS 98 (245)
T ss_pred ---C---CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecC
Confidence 2 24799999999999999999999999999987654
No 42
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.40 E-value=5.7e-13 Score=120.66 Aligned_cols=104 Identities=15% Similarity=0.106 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCCCCc-----------chh-hhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHH
Q 025941 97 NAPIFVYLGAEESLDG-----------DIS-VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSA 164 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~-----------~~~-~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~ 164 (246)
+.|+||+||+.++... +|. ..+....+. .-++.|+++|+||||.|.+. ..+.+
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~-~~~~~Vi~~Dl~G~g~s~~~--------------~~~~~ 121 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALD-PARFRLLAFDFIGADGSLDV--------------PIDTA 121 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccC-ccccEEEEEeCCCCCCCCCC--------------CCCHH
Confidence 4689999988887652 222 111000121 12579999999999988531 13456
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
..++|+..+++++.. +.+++++||||||++|..++.+||+.|.++|+.++.
T Consensus 122 ~~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 122 DQADAIALLLDALGI-----ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred HHHHHHHHHHHHcCC-----CcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 677888887776532 123579999999999999999999999999987653
No 43
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.37 E-value=3.9e-12 Score=107.62 Aligned_cols=119 Identities=18% Similarity=0.232 Sum_probs=84.1
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
.+.|+++||+.++...+....+ +.+++.+.|+.|+++|+|++|.+...-+. +.. .... .......|+..+++.
T Consensus 13 ~P~vv~lHG~~~~~~~~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~---~~~-~~~~--~~~~~~~~~~~~i~~ 85 (212)
T TIGR01840 13 RALVLALHGCGQTASAYVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDW---FFT-HHRA--RGTGEVESLHQLIDA 85 (212)
T ss_pred CCEEEEeCCCCCCHHHHhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCC---CCc-cccC--CCCccHHHHHHHHHH
Confidence 3567888998877665432112 45677788999999999998754321000 000 0000 012345778888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
+++++..+..+++++|||+||.+++.++.++|+.+.++++.|++..
T Consensus 86 ~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 86 VKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 8888776777999999999999999999999999999888777654
No 44
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.35 E-value=6.2e-12 Score=109.37 Aligned_cols=129 Identities=17% Similarity=0.242 Sum_probs=88.1
Q ss_pred EEEeecCCCCCCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEe-CCCCCCCcchhhhHHHHHHHHHcCCeEEEEccc
Q 025941 59 YYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYL-GAEESLDGDISVIGFLTDNAARFNALLVYIEHR 137 (246)
Q Consensus 59 ~~~q~lDhf~~~~~~~~tF~qry~~~~~~~~~g~~~~~~~pI~l~~-Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~R 137 (246)
||+...|--- +.+..||+--+-.++ .+.+||++++ |+..+.-.|.. +..++......+|+++|.|
T Consensus 46 yFdekedv~i--~~~~~t~n~Y~t~~~---------~t~gpil~l~HG~G~S~LSfA~---~a~el~s~~~~r~~a~DlR 111 (343)
T KOG2564|consen 46 YFDEKEDVSI--DGSDLTFNVYLTLPS---------ATEGPILLLLHGGGSSALSFAI---FASELKSKIRCRCLALDLR 111 (343)
T ss_pred hhcccccccc--CCCcceEEEEEecCC---------CCCccEEEEeecCcccchhHHH---HHHHHHhhcceeEEEeecc
Confidence 4666666543 233447763332222 2357877665 66656655554 5677777788899999999
Q ss_pred cccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEE
Q 025941 138 YYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK--YPHAALGAL 215 (246)
Q Consensus 138 gyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~--yP~~v~g~v 215 (246)
|||++.- ++...++.|..+.|+-.+++.+-.+ ...+++++||||||+||+..+.. -|. +.|++
T Consensus 112 gHGeTk~-----------~~e~dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~ 176 (343)
T KOG2564|consen 112 GHGETKV-----------ENEDDLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLV 176 (343)
T ss_pred ccCcccc-----------CChhhcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchh-hhceE
Confidence 9999974 2223378899999999888776533 45689999999999999887653 566 45555
Q ss_pred E
Q 025941 216 A 216 (246)
Q Consensus 216 ~ 216 (246)
.
T Consensus 177 v 177 (343)
T KOG2564|consen 177 V 177 (343)
T ss_pred E
Confidence 3
No 45
>PRK10985 putative hydrolase; Provisional
Probab=99.35 E-value=9e-12 Score=112.12 Aligned_cols=110 Identities=21% Similarity=0.239 Sum_probs=78.5
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
++.|+++||..++....+. ..+.+.+.+.|+.|+++|+||||.+..... . . ... ...+|+..+++.
T Consensus 58 ~p~vll~HG~~g~~~~~~~--~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~---------~-~-~~~-~~~~D~~~~i~~ 123 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYA--HGLLEAAQKRGWLGVVMHFRGCSGEPNRLH---------R-I-YHS-GETEDARFFLRW 123 (324)
T ss_pred CCEEEEeCCCCCCCcCHHH--HHHHHHHHHCCCEEEEEeCCCCCCCccCCc---------c-e-ECC-CchHHHHHHHHH
Confidence 4578889998877544221 123344557899999999999997742110 0 1 111 235788888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc--eeEEEEecCccc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHA--ALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~--v~g~v~ssapv~ 222 (246)
++++++ ..|++++||||||.+++.++.++++. +.++++.++|..
T Consensus 124 l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 124 LQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred HHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 887763 46799999999999999888887754 788888888864
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.31 E-value=5.1e-11 Score=104.84 Aligned_cols=110 Identities=11% Similarity=0.051 Sum_probs=78.5
Q ss_pred CCcEEEEeCCCCCCC-cchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLD-GDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~-~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
+.+|+++|||.+... .+.... .+.+...+.|+.|+++|+||||+|.+.. .+.++..+|+..+++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~-~la~~l~~~G~~v~~~Dl~G~G~S~~~~--------------~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFV-LLARRLAEAGFPVLRFDYRGMGDSEGEN--------------LGFEGIDADIAAAID 90 (274)
T ss_pred CCeEEEEeCCccccCCchhHHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------CCHHHHHHHHHHHHH
Confidence 457888998765432 222111 2333334578999999999999986410 245677899999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILY 223 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~ 223 (246)
.++++.. .-.+++++|||+||.+++.++.. ++.++++|+.++++..
T Consensus 91 ~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 91 AFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT 136 (274)
T ss_pred HHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC
Confidence 9987642 12469999999999999988765 5679999998877543
No 47
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.30 E-value=2.2e-11 Score=110.26 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=76.6
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.||+++||..++...|.. ....+.. ++.|+++|+||||.|.+.. ...+.++..+|+..+++
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~---~~~~l~~--~~~v~~~d~~g~G~s~~~~------------~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLF---NHAALAA--GRPVIALDLPGHGASSKAV------------GAGSLDELAAAVLAFLD 192 (371)
T ss_pred CCCeEEEECCCCCccchHHH---HHHHHhc--CCEEEEEcCCCCCCCCCCC------------CCCCHHHHHHHHHHHHH
Confidence 35789999999888777654 3333433 4799999999999996421 12355666677666665
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
.+ . ..+++++|||+||.++..++.++|+.+.++++.+++
T Consensus 193 ~~----~--~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 193 AL----G--IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred hc----C--CccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 43 2 246999999999999999999999999999987765
No 48
>PRK10566 esterase; Provisional
Probab=99.30 E-value=2.4e-11 Score=104.28 Aligned_cols=110 Identities=18% Similarity=0.132 Sum_probs=74.9
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCC-C-CHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGY-F-NSAQAITDYAEIL 174 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~-l-t~~q~l~D~a~~i 174 (246)
.+.|+++||+.++...+. .+.+...+.|+.|+++|+||||.+.+-.+ ...... . ...+.++|+..++
T Consensus 27 ~p~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 95 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYS----YFAVALAQAGFRVIMPDAPMHGARFSGDE-------ARRLNHFWQILLQNMQEFPTLR 95 (249)
T ss_pred CCEEEEeCCCCcccchHH----HHHHHHHhCCCEEEEecCCcccccCCCcc-------ccchhhHHHHHHHHHHHHHHHH
Confidence 456888899877765432 34444456799999999999998643111 011110 0 1235677888888
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEe
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALAS 217 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~s 217 (246)
+.+.+....+..+++++|||+||.++++++.++|+...++++.
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~ 138 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLM 138 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEee
Confidence 8877653345678999999999999999999999865554433
No 49
>PRK07581 hypothetical protein; Validated
Probab=99.29 E-value=1.4e-11 Score=111.17 Aligned_cols=116 Identities=13% Similarity=0.096 Sum_probs=66.8
Q ss_pred CCcEEEEeCCCC-CCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEE-SLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~-~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
+.|++++||+.+ +...+....+....+. ..++.||++|+||||.|.+..+.. ..-+...+......+|++....
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 114 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALD-PEKYFIIIPNMFGNGLSSSPSNTP----APFNAARFPHVTIYDNVRAQHR 114 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccC-cCceEEEEecCCCCCCCCCCCCCC----CCCCCCCCCceeHHHHHHHHHH
Confidence 456666665544 4333211000001222 236799999999999997422100 0001111111223455554333
Q ss_pred HHHHHcCCCCCC-EEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 176 YIKEKYNARHSP-VIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 176 ~l~~~~~~~~~p-vil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
.+.+.++. .+ ++++||||||++|..++.+||+.|.++|+.++
T Consensus 115 ~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 115 LLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred HHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 34344433 45 47999999999999999999999999997654
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.24 E-value=4.8e-11 Score=127.13 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.+|+|+||..++...|.. ++..+++ ++.|+++|+||||.|...... +.......++.+...+|+..+++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~---~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~----~~~~~~~~~si~~~a~~l~~ll~ 1440 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIP---IMKAISG--SARCISIDLPGHGGSKIQNHA----KETQTEPTLSVELVADLLYKLIE 1440 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHH---HHHHHhC--CCEEEEEcCCCCCCCCCcccc----ccccccccCCHHHHHHHHHHHHH
Confidence 34689999999998876543 4444544 469999999999999643210 00001123466777777777776
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
++. ..+++++||||||+++..++.+||+.|.++++.++
T Consensus 1441 ~l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1441 HIT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred HhC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 542 24799999999999999999999999999987664
No 51
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.21 E-value=2.8e-11 Score=109.96 Aligned_cols=119 Identities=17% Similarity=0.198 Sum_probs=74.0
Q ss_pred CCcEEEEeCCCCCC--Ccchh--hhHHHHHH------HHHcCCeEEEEcccc--ccCCCCCCCchhhhccccccCCCCHH
Q 025941 97 NAPIFVYLGAEESL--DGDIS--VIGFLTDN------AARFNALLVYIEHRY--YGKSIPFGSRKEALKNASTLGYFNSA 164 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~--~~~~~--~~g~~~~~------a~~~g~~vv~~d~Rg--yG~S~p~~~~~~~~~~~~~l~~lt~~ 164 (246)
+.+|+|+||..++. ..+.. ..|+...+ ....++.||++|+|| ||.|.|.........-.......+.+
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 45899999988865 21100 00111111 113467999999999 67665421100000000011135677
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCC-EEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 165 QAITDYAEILLYIKEKYNARHSP-VIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~p-vil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+..+|+..+++++ +. .+ ++++||||||++++.++.++|+.+.++|+.+++.
T Consensus 111 ~~~~~~~~~~~~l----~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 111 DDVKAQKLLLDHL----GI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHc----CC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 7777777777654 22 34 8999999999999999999999999999876543
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.21 E-value=4.6e-11 Score=99.63 Aligned_cols=78 Identities=21% Similarity=0.326 Sum_probs=58.8
Q ss_pred CeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 129 ALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 129 ~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
+.|+++|+||+|.|.|... .....++.+...+|+..+++ .++. .+++++||||||++++.++.+||
T Consensus 1 f~vi~~d~rG~g~S~~~~~--------~~~~~~~~~~~~~~~~~~~~----~l~~--~~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWD--------PDFPDYTTDDLAADLEALRE----ALGI--KKINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEEECTTSTTSSSCCG--------SGSCTHCHHHHHHHHHHHHH----HHTT--SSEEEEEETHHHHHHHHHHHHSG
T ss_pred CEEEEEeCCCCCCCCCCcc--------CCcccccHHHHHHHHHHHHH----HhCC--CCeEEEEECCChHHHHHHHHHCc
Confidence 4799999999999986100 12233455555566555554 4433 34999999999999999999999
Q ss_pred CceeEEEEecCc
Q 025941 209 HAALGALASSAP 220 (246)
Q Consensus 209 ~~v~g~v~ssap 220 (246)
+.|.++++.+++
T Consensus 67 ~~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 ERVKKLVLISPP 78 (230)
T ss_dssp GGEEEEEEESES
T ss_pred hhhcCcEEEeee
Confidence 999999998886
No 53
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.20 E-value=4.2e-11 Score=108.32 Aligned_cols=111 Identities=16% Similarity=0.199 Sum_probs=80.8
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.||+++||..++...|.. .+..+.+..|..|+++|..|||.|++.+. .. .+ .+.+....++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~---~~~~L~~~~~~~v~aiDl~G~g~~s~~~~--------~~--~y----~~~~~v~~i~ 119 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRR---VVPLLSKAKGLRVLAIDLPGHGYSSPLPR--------GP--LY----TLRELVELIR 119 (326)
T ss_pred CCCcEEEeccccCCcccHhh---hccccccccceEEEEEecCCCCcCCCCCC--------CC--ce----ehhHHHHHHH
Confidence 57899999999998877765 34455666688999999999997665322 11 12 2334444455
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEE---EecCcccccC
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGAL---ASSAPILYFD 225 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v---~ssapv~~~~ 225 (246)
.+-.++. ..|++++||||||++|..++..||+.|++++ +..+|....+
T Consensus 120 ~~~~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~ 170 (326)
T KOG1454|consen 120 RFVKEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTP 170 (326)
T ss_pred HHHHhhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCC
Confidence 4444443 3469999999999999999999999999999 6666665443
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.18 E-value=2.4e-10 Score=106.53 Aligned_cols=108 Identities=16% Similarity=0.111 Sum_probs=74.3
Q ss_pred CCcEEEEeCCCCCCC-cchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLD-GDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~-~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
..|++++|||.+... ..+. .+.+...+.|+.|+++|+||+|+|..... . ..... ....+++
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~---~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-----------~-~d~~~---~~~avld 254 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYR---LFRDYLAPRGIAMLTIDMPSVGFSSKWKL-----------T-QDSSL---LHQAVLN 254 (414)
T ss_pred CccEEEEeCCcccchhhhHH---HHHHHHHhCCCEEEEECCCCCCCCCCCCc-----------c-ccHHH---HHHHHHH
Confidence 468888887766532 2221 33444457799999999999999964210 0 01111 1124455
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.+......+..++.++||||||.+|+.++..+|+.++++|+.++++.
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 55543333557899999999999999999999999999999888763
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=99.18 E-value=6.8e-11 Score=112.98 Aligned_cols=105 Identities=13% Similarity=0.079 Sum_probs=75.3
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.++||+|+||..++...|.. ++..++ .++.|+++|+||||.|.+.. ....++.++.++|+..+++
T Consensus 24 ~~~~ivllHG~~~~~~~w~~---~~~~L~--~~~~Vi~~D~~G~G~S~~~~----------~~~~~~~~~~a~dl~~~i~ 88 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDG---VAPLLA--DRFRVVAYDVRGAGRSSAPK----------RTAAYTLARLADDFAAVID 88 (582)
T ss_pred CCCeEEEEcCCCchHHHHHH---HHHHhh--cceEEEEecCCCCCCCCCCC----------cccccCHHHHHHHHHHHHH
Confidence 35689999999888766543 444443 36799999999999997532 1123578899999999998
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLK--YPHAALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~--yP~~v~g~v~ssap 220 (246)
.+.. ..|++++||||||+++..++.+ +|+.+..+++.++|
T Consensus 89 ~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 89 AVSP-----DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred HhCC-----CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 7642 3469999999999998777655 35555555555544
No 56
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.13 E-value=4.4e-10 Score=87.99 Aligned_cols=93 Identities=20% Similarity=0.163 Sum_probs=67.5
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIK 178 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~ 178 (246)
|||++||+.++...+. .+.+...+.|+.|+.+|+|++|.+... .+...+++.+.
T Consensus 1 ~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ----PLAEALAEQGYAVVAFDYPGHGDSDGA----------------------DAVERVLADIR 54 (145)
T ss_dssp EEEEECTTTTTTHHHH----HHHHHHHHTTEEEEEESCTTSTTSHHS----------------------HHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHH----HHHHHHHHCCCEEEEEecCCCCccchh----------------------HHHHHHHHHHH
Confidence 6899999988755432 333444455999999999999987310 13334444433
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 179 EKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 179 ~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
+... +..+++++|||+||.+++.++.+. ..++++|+.++
T Consensus 55 ~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 55 AGYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred hhcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 3322 456899999999999999999998 77899998776
No 57
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.13 E-value=4.5e-10 Score=99.93 Aligned_cols=108 Identities=19% Similarity=0.185 Sum_probs=87.0
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
..+|++++||--|+..+|.. +-..++++.+..|+++|.|-||.|.... -.+-+.+.+|+..||+
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~s---v~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-------------~h~~~~ma~dv~~Fi~ 114 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRS---VAKNLSRKLGRDVYAVDVRNHGSSPKIT-------------VHNYEAMAEDVKLFID 114 (315)
T ss_pred CCCceEEecccccCCCCHHH---HHHHhcccccCceEEEecccCCCCcccc-------------ccCHHHHHHHHHHHHH
Confidence 45899999999999988754 5567888999999999999999996421 1346778899999999
Q ss_pred HHHHHcCCCCCCEEEEecChHH-HHHHHHHHHCCCceeEEEE-ecCcc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGG-MLAAWFRLKYPHAALGALA-SSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG-~laa~~~~~yP~~v~g~v~-ssapv 221 (246)
..+... ...|++++|||||| .+++....++|+.+..+|. -.+|.
T Consensus 115 ~v~~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 115 GVGGST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG 160 (315)
T ss_pred Hccccc--ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCc
Confidence 887543 24579999999999 8888889999999887774 45665
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.12 E-value=5.7e-10 Score=101.39 Aligned_cols=109 Identities=13% Similarity=0.154 Sum_probs=78.7
Q ss_pred CCcEEEEeCCCCCCCcch--hhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHH-HHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDI--SVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAI-TDYAEI 173 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~--~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l-~D~a~~ 173 (246)
+.||+++||.......+. ... .+.+...+.|+.|+++|+|++|.|.. ..+.+..+ +|+..+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~-~~~~~L~~~G~~V~~~D~~g~g~s~~---------------~~~~~d~~~~~~~~~ 125 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDR-SLVRGLLERGQDVYLIDWGYPDRADR---------------YLTLDDYINGYIDKC 125 (350)
T ss_pred CCcEEEeccccccceeccCCCCc-hHHHHHHHCCCeEEEEeCCCCCHHHh---------------cCCHHHHHHHHHHHH
Confidence 468888887532221110 111 23444456799999999999987642 13445554 458888
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccc
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILY 223 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~ 223 (246)
++.+++..+ ..+++++||||||++++.++.++|+.+.++++.++|+..
T Consensus 126 v~~l~~~~~--~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 126 VDYICRTSK--LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHhC--CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 888887763 457999999999999999999999999999998888753
No 59
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.10 E-value=1.5e-09 Score=101.43 Aligned_cols=110 Identities=14% Similarity=0.050 Sum_probs=76.8
Q ss_pred CCCcEEEEeCCCCCCC--cchhhhHHHHHHHHH-cCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLD--GDISVIGFLTDNAAR-FNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAE 172 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~--~~~~~~g~~~~~a~~-~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~ 172 (246)
.++++|++||..++.. .|.. .+...+... -.++|+++|.|++|.|..... . .+.....++++.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~--~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a----------~--~~t~~vg~~la~ 105 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVP--KLVAALYEREPSANVIVVDWLSRAQQHYPTS----------A--AYTKLVGKDVAK 105 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHH--HHHHHHHhccCCCEEEEEECCCcCCCCCccc----------c--ccHHHHHHHHHH
Confidence 3578999999876532 1211 112222222 258999999999998753211 1 123566678899
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
+++.+.+.+..+-.++.++||||||.+|..++.++|+.|..+++..+
T Consensus 106 lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDP 152 (442)
T TIGR03230 106 FVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDP 152 (442)
T ss_pred HHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcC
Confidence 99988766554446799999999999999999999999998887653
No 60
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.08 E-value=9.2e-10 Score=93.07 Aligned_cols=109 Identities=16% Similarity=0.070 Sum_probs=88.4
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+..|+++||..|+..... .+.+..++.|+.|.++-+||||... +.+--.+.+...+|+...-++
T Consensus 15 ~~AVLllHGFTGt~~Dvr----~Lgr~L~e~GyTv~aP~ypGHG~~~------------e~fl~t~~~DW~~~v~d~Y~~ 78 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVR----MLGRYLNENGYTVYAPRYPGHGTLP------------EDFLKTTPRDWWEDVEDGYRD 78 (243)
T ss_pred CEEEEEEeccCCCcHHHH----HHHHHHHHCCceEecCCCCCCCCCH------------HHHhcCCHHHHHHHHHHHHHH
Confidence 478999999999876543 5667777889999999999999764 222234678899999999899
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFDD 226 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~~ 226 (246)
+++.- -..+.++|-||||.+|++++..|| +++++..+||+..+.+
T Consensus 79 L~~~g---y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~ 123 (243)
T COG1647 79 LKEAG---YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSW 123 (243)
T ss_pred HHHcC---CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccc
Confidence 88432 135999999999999999999999 7999999999976654
No 61
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.08 E-value=1e-09 Score=96.94 Aligned_cols=108 Identities=13% Similarity=0.049 Sum_probs=76.4
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHH-HHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLT-DNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~-~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
+.++|++||..++....+. ..+. .+..+.++.|+++|.++++.+.. . ....+.+...++++.+++
T Consensus 36 ~p~vilIHG~~~~~~~~~~--~~l~~~ll~~~~~nVi~vD~~~~~~~~y-~-----------~a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWI--SDLRKAYLSRGDYNVIVVDWGRGANPNY-P-----------QAVNNTRVVGAELAKFLD 101 (275)
T ss_pred CCcEEEEcCCCCCCCCcHH--HHHHHHHHhcCCCEEEEEECccccccCh-H-----------HHHHhHHHHHHHHHHHHH
Confidence 4678999998887632221 1222 34444578999999998733221 0 011234556678888999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASS 218 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ss 218 (246)
.+.+....+..+++++||||||.+|..++..+|+.+..+++..
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LD 144 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLD 144 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEec
Confidence 8877644444679999999999999999999999999998764
No 62
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.08 E-value=4.8e-10 Score=96.81 Aligned_cols=102 Identities=17% Similarity=0.273 Sum_probs=83.0
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
..+++.||+..+.+. ...++..++..++.+|+.+|++|||.|...++. ....+|+.++.+.+
T Consensus 61 ~~lly~hGNa~Dlgq---~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---------------~n~y~Di~avye~L 122 (258)
T KOG1552|consen 61 PTLLYSHGNAADLGQ---MVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---------------RNLYADIKAVYEWL 122 (258)
T ss_pred eEEEEcCCcccchHH---HHHHHHHHhhcccceEEEEecccccccCCCccc---------------ccchhhHHHHHHHH
Confidence 456677788677662 344777888888999999999999999864321 14568999999999
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
++.++ ++.+++++|+|+|...+..++.++| +.|+|+.|+-
T Consensus 123 r~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf 162 (258)
T KOG1552|consen 123 RNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPF 162 (258)
T ss_pred HhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccc
Confidence 99997 6789999999999999999999999 7888876643
No 63
>PRK13604 luxD acyl transferase; Provisional
Probab=99.08 E-value=7.7e-10 Score=98.84 Aligned_cols=103 Identities=11% Similarity=0.027 Sum_probs=72.3
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccc-cCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYY-GKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rgy-G~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+.||+.||..+....+ .-+++...+.|+.|+.+|.|++ |+|... .+..+......|+..+++
T Consensus 37 ~~~vIi~HGf~~~~~~~----~~~A~~La~~G~~vLrfD~rg~~GeS~G~------------~~~~t~s~g~~Dl~aaid 100 (307)
T PRK13604 37 NNTILIASGFARRMDHF----AGLAEYLSSNGFHVIRYDSLHHVGLSSGT------------IDEFTMSIGKNSLLTVVD 100 (307)
T ss_pred CCEEEEeCCCCCChHHH----HHHHHHHHHCCCEEEEecCCCCCCCCCCc------------cccCcccccHHHHHHHHH
Confidence 45678888887764322 2344555578999999999987 999641 112233334789999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+++++. ..++.++||||||++|...+...| +.++|+.++.
T Consensus 101 ~lk~~~---~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~ 140 (307)
T PRK13604 101 WLNTRG---INNLGLIAASLSARIAYEVINEID--LSFLITAVGV 140 (307)
T ss_pred HHHhcC---CCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCc
Confidence 998752 347999999999999877666443 7777765543
No 64
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.04 E-value=4.2e-09 Score=92.74 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=71.5
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcc--ccccCCCCCCCch----hh-hccc--ccc-CCCCHH-H
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEH--RYYGKSIPFGSRK----EA-LKNA--STL-GYFNSA-Q 165 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~--RgyG~S~p~~~~~----~~-~~~~--~~l-~~lt~~-q 165 (246)
.+.|+++||..++...+.. ...+..++.+.|+.||++|. ||+|.+.-..... .. +-+. ... ...+.+ .
T Consensus 42 ~P~vvllHG~~~~~~~~~~-~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMI-KAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCEEEEccCCCCCccHHHh-hhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 3456778888877765532 22345777778999999997 6655432100000 00 0000 000 001111 1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 166 AITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 166 ~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
.++|+..+ +.+++..+..+++++||||||.+|+.++.++|+.+.++++.++.
T Consensus 121 ~~~~l~~~---~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 121 IVQELPAL---VAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHH---HHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 22333333 33334445568999999999999999999999999998876654
No 65
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.01 E-value=1.2e-09 Score=90.17 Aligned_cols=103 Identities=23% Similarity=0.238 Sum_probs=72.0
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
++|++.||+.++...+......+...... +.++++|.||||.|.+. ........+|+..+++.+
T Consensus 22 ~~i~~~hg~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~g~g~s~~~--------------~~~~~~~~~~~~~~~~~~ 85 (282)
T COG0596 22 PPLVLLHGFPGSSSVWRPVFKVLPALAAR--YRVIAPDLRGHGRSDPA--------------GYSLSAYADDLAALLDAL 85 (282)
T ss_pred CeEEEeCCCCCchhhhHHHHHHhhccccc--eEEEEecccCCCCCCcc--------------cccHHHHHHHHHHHHHHh
Confidence 48999999998877665311111111111 79999999999999610 011222356666666644
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
. . .+++++||||||.++..++.++|+.+.++++.+++..
T Consensus 86 ~----~--~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 86 G----L--EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred C----C--CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 3 2 2399999999999999999999999999998876643
No 66
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.98 E-value=1.1e-09 Score=100.67 Aligned_cols=118 Identities=16% Similarity=0.146 Sum_probs=74.3
Q ss_pred CCcEEEEeCCCCCCCcchh------hhHHHHHHH------HHcCCeEEEEccccc-cCC-CCCCCchhhhcc-ccccCCC
Q 025941 97 NAPIFVYLGAEESLDGDIS------VIGFLTDNA------ARFNALLVYIEHRYY-GKS-IPFGSRKEALKN-ASTLGYF 161 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~------~~g~~~~~a------~~~g~~vv~~d~Rgy-G~S-~p~~~~~~~~~~-~~~l~~l 161 (246)
+.+|+++||..++...+.. ..|+...+. ...++.||++|+||+ |.| .|........++ ......+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 4679999999988763210 001111111 023679999999983 544 332100000000 0001135
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 162 NSAQAITDYAEILLYIKEKYNARHSP-VIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 162 t~~q~l~D~a~~i~~l~~~~~~~~~p-vil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+.+...+|+..+++++.. .+ ++++||||||+++..++.+||+.|.++|+.++.
T Consensus 128 ~~~~~~~~~~~~l~~l~~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI------TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred CHHHHHHHHHHHHHHhCC------CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 778888888888876532 34 589999999999999999999999999987654
No 67
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.98 E-value=2.4e-09 Score=103.21 Aligned_cols=110 Identities=12% Similarity=-0.046 Sum_probs=76.0
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
+.|+++||...+............+...+.|+.|+.+|+||+|.|.... .... .+.++|+..+++++
T Consensus 23 P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~------------~~~~-~~~~~D~~~~i~~l 89 (550)
T TIGR00976 23 PVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF------------DLLG-SDEAADGYDLVDWI 89 (550)
T ss_pred CEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce------------EecC-cccchHHHHHHHHH
Confidence 3456667665543210000001123334679999999999999997421 1122 45778999999999
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
.++. ..+.++.++|+||||.++..++..+|+.+++++..++..
T Consensus 90 ~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 90 AKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 7753 234689999999999999999999999999999766553
No 68
>PLN02872 triacylglycerol lipase
Probab=98.94 E-value=1.4e-09 Score=100.77 Aligned_cols=116 Identities=18% Similarity=0.098 Sum_probs=75.4
Q ss_pred CCCcEEEEeCCCCCCCcchhh--hHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHH-HHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISV--IGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQ-AITDYAE 172 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~--~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q-~l~D~a~ 172 (246)
.+.||+++||..++...|... ...+.....+.|+.|+.+|.||+|.|..-..... .+.+-+. ++.++ +..|+.+
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~--~~~~fw~-~s~~e~a~~Dl~a 149 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSE--KDKEFWD-WSWQELALYDLAE 149 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCc--cchhccC-CcHHHHHHHHHHH
Confidence 356899999988777665321 1123333446799999999999887643211100 0111122 45544 5589999
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEec
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH---AALGALASS 218 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~---~v~g~v~ss 218 (246)
+++++.+.. ..+++++|||+||+++.. +..+|+ .|+.+++.+
T Consensus 150 ~id~i~~~~---~~~v~~VGhS~Gg~~~~~-~~~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 150 MIHYVYSIT---NSKIFIVGHSQGTIMSLA-ALTQPNVVEMVEAAALLC 194 (395)
T ss_pred HHHHHHhcc---CCceEEEEECHHHHHHHH-HhhChHHHHHHHHHHHhc
Confidence 999987542 358999999999999974 446787 456666544
No 69
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.90 E-value=1.9e-09 Score=91.06 Aligned_cols=104 Identities=15% Similarity=0.240 Sum_probs=79.1
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
..+.++++|++.|+.+-.... ..-+-.+++.+|+.+|+||||+|...++. +.+ .-|...+++
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i---~~~fy~~l~mnv~ivsYRGYG~S~GspsE-------~GL--------~lDs~avld 138 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPI---ARVFYVNLKMNVLIVSYRGYGKSEGSPSE-------EGL--------KLDSEAVLD 138 (300)
T ss_pred CCceEEEEccCCCcccchhhH---HHHHHHHcCceEEEEEeeccccCCCCccc-------cce--------eccHHHHHH
Confidence 345677889999998765542 22334577889999999999999865421 111 135566677
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEe
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALAS 217 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~s 217 (246)
++..+...++.+++++|.|.||++|..++.+.-+.+.++|+-
T Consensus 139 yl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivE 180 (300)
T KOG4391|consen 139 YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVE 180 (300)
T ss_pred HHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeee
Confidence 887766667889999999999999999999999999998864
No 70
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.90 E-value=7e-09 Score=102.70 Aligned_cols=104 Identities=21% Similarity=0.242 Sum_probs=71.4
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchh-hhccccccCCC----------CHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKE-ALKNASTLGYF----------NSAQAI 167 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~-~~~~~~~l~~l----------t~~q~l 167 (246)
+|+++||..++...|.. +...+ .+.|+.|+++||||||+|....+.+. +....+.+.|+ +.+|.+
T Consensus 451 ~VVllHG~~g~~~~~~~---lA~~L-a~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v 526 (792)
T TIGR03502 451 VVIYQHGITGAKENALA---FAGTL-AAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI 526 (792)
T ss_pred EEEEeCCCCCCHHHHHH---HHHHH-HhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHH
Confidence 68888998888876543 22333 35688999999999999943211000 00011223343 459999
Q ss_pred HHHHHHHHHHH------HHc----CCCCCCEEEEecChHHHHHHHHHHH
Q 025941 168 TDYAEILLYIK------EKY----NARHSPVIVIGGSYGGMLAAWFRLK 206 (246)
Q Consensus 168 ~D~a~~i~~l~------~~~----~~~~~pvil~G~S~GG~laa~~~~~ 206 (246)
.|+..++..++ ++. ..+..|++++||||||+++..+...
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 99999999887 321 1356799999999999999999865
No 71
>PRK11071 esterase YqiA; Provisional
Probab=98.89 E-value=1.5e-08 Score=84.78 Aligned_cols=91 Identities=16% Similarity=0.255 Sum_probs=61.5
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHH--cCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAAR--FNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~--~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.+|+++||..++...|.. ..+.+...+ .++.|+++|+|+||. ++.+++..+++
T Consensus 2 p~illlHGf~ss~~~~~~--~~~~~~l~~~~~~~~v~~~dl~g~~~-----------------------~~~~~l~~l~~ 56 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKA--TLLKNWLAQHHPDIEMIVPQLPPYPA-----------------------DAAELLESLVL 56 (190)
T ss_pred CeEEEECCCCCCcchHHH--HHHHHHHHHhCCCCeEEeCCCCCCHH-----------------------HHHHHHHHHHH
Confidence 479999999998887642 123333332 367999999998741 23344444443
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
++. ..+++++||||||.+++.++.++|. .+++.++++.
T Consensus 57 ----~~~--~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 57 ----EHG--GDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred ----HcC--CCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 332 3479999999999999999999994 2355555443
No 72
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.83 E-value=6.9e-08 Score=82.99 Aligned_cols=133 Identities=16% Similarity=0.115 Sum_probs=76.7
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHH----HHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDN----AARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYA 171 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~----a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a 171 (246)
.+.||+|+||..|+...+........+. .....+.++++|........ .-.+..+..+-+.
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~---------------~g~~l~~q~~~~~ 67 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF---------------HGRTLQRQAEFLA 67 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc---------------ccccHHHHHHHHH
Confidence 3689999999888765433211111111 11224577777755422111 0011122223334
Q ss_pred HHHHHHHHHc---CCCCCCEEEEecChHHHHHHHHHHHCC---CceeEEEEecCcccccCCC--CCchhhHHHHHHHHHh
Q 025941 172 EILLYIKEKY---NARHSPVIVIGGSYGGMLAAWFRLKYP---HAALGALASSAPILYFDDI--TPQNGYYSIVTRDFRV 243 (246)
Q Consensus 172 ~~i~~l~~~~---~~~~~pvil~G~S~GG~laa~~~~~yP---~~v~g~v~ssapv~~~~~~--~~~~~y~~~v~~~~~~ 243 (246)
+.++.+.+.+ ..+..+++++||||||.+|..+....+ +.|.++|..++|....+-. .....+|+.+.+..++
T Consensus 68 ~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~~~~d~~~~~~y~~~~~~~~~ 147 (225)
T PF07819_consen 68 EAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSPLAFDRSLDRFYKRLNNFWRK 147 (225)
T ss_pred HHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCccccchHHHHHHHHHHHHHHHH
Confidence 4444444444 235678999999999999988776544 5799999999998755421 1245667766665554
No 73
>PLN00021 chlorophyllase
Probab=98.82 E-value=4.6e-08 Score=88.09 Aligned_cols=100 Identities=14% Similarity=0.038 Sum_probs=63.2
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
..+|+++||+.++...|.. .+..+ .+.|+.|+++|+++++.+... ..+.|..+++++
T Consensus 52 ~PvVv~lHG~~~~~~~y~~---l~~~L-as~G~~VvapD~~g~~~~~~~-------------------~~i~d~~~~~~~ 108 (313)
T PLN00021 52 YPVLLFLHGYLLYNSFYSQ---LLQHI-ASHGFIVVAPQLYTLAGPDGT-------------------DEIKDAAAVINW 108 (313)
T ss_pred CCEEEEECCCCCCcccHHH---HHHHH-HhCCCEEEEecCCCcCCCCch-------------------hhHHHHHHHHHH
Confidence 3567888998877655432 33344 456999999999986432110 112233333333
Q ss_pred HHHH--------cCCCCCCEEEEecChHHHHHHHHHHHCCC-----ceeEEEEecC
Q 025941 177 IKEK--------YNARHSPVIVIGGSYGGMLAAWFRLKYPH-----AALGALASSA 219 (246)
Q Consensus 177 l~~~--------~~~~~~pvil~G~S~GG~laa~~~~~yP~-----~v~g~v~ssa 219 (246)
+.+. ...+..+++++|||+||.+|..++.++|+ .+.++++..+
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 3321 11233579999999999999999999986 4566665543
No 74
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.82 E-value=1.3e-08 Score=85.18 Aligned_cols=103 Identities=19% Similarity=0.181 Sum_probs=73.5
Q ss_pred EEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHH
Q 025941 100 IFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKE 179 (246)
Q Consensus 100 I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~ 179 (246)
||++|||.+....-.....+...++.+.|+.|+.+|+|=.-+ .+..++++|+...++++.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~-------------------~~~p~~~~D~~~a~~~l~~ 61 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE-------------------APFPAALEDVKAAYRWLLK 61 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT-------------------SSTTHHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc-------------------ccccccccccccceeeecc
Confidence 689999998766543334566778888899999999994211 1234788999999999887
Q ss_pred H---cCCCCCCEEEEecChHHHHHHHHHHHCCC----ceeEEEEecCcc
Q 025941 180 K---YNARHSPVIVIGGSYGGMLAAWFRLKYPH----AALGALASSAPI 221 (246)
Q Consensus 180 ~---~~~~~~pvil~G~S~GG~laa~~~~~yP~----~v~g~v~ssapv 221 (246)
+ ++.+..+++++|+|-||.||+.++.+..+ .+.++++.++..
T Consensus 62 ~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 62 NADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp THHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 6 34456689999999999999998875443 378888887743
No 75
>PRK11460 putative hydrolase; Provisional
Probab=98.80 E-value=9e-08 Score=82.40 Aligned_cols=119 Identities=15% Similarity=0.017 Sum_probs=71.1
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhh---c-cccccCCCCHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEAL---K-NASTLGYFNSAQAITDYA 171 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~---~-~~~~l~~lt~~q~l~D~a 171 (246)
++..||++||..++...+.. +...+++. +..+.++..|++..+...... ++ . ..+....-..+..++++.
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~---l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~--~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGE---IGSWFAPA-FPDALVVSVGGPEPSGNGAGR--QWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCcEEEEEeCCCCChHHHHH---HHHHHHHH-CCCCEEECCCCCCCcCCCCCc--ccccCCCCCccchHHHHHHHHHHHH
Confidence 34679999999998876543 33344433 333444445554332110000 00 0 000000012234455566
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
++++.+.++++.+..+++++|+|+||.+++.++.++|+.+.++++.++.
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 6677776676666678999999999999999999999988877766554
No 76
>PRK10162 acetyl esterase; Provisional
Probab=98.80 E-value=3.3e-08 Score=88.95 Aligned_cols=105 Identities=21% Similarity=0.154 Sum_probs=70.1
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
+.|+++|||............+...++.+.|+.|+.+|+|.-.+. ++ ..+++|+...++++
T Consensus 82 p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-~~------------------p~~~~D~~~a~~~l 142 (318)
T PRK10162 82 ATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-RF------------------PQAIEEIVAVCCYF 142 (318)
T ss_pred CEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-CC------------------CCcHHHHHHHHHHH
Confidence 457788988855433211123556777778999999999953221 11 13456777666666
Q ss_pred HH---HcCCCCCCEEEEecChHHHHHHHHHHHC------CCceeEEEEecCcc
Q 025941 178 KE---KYNARHSPVIVIGGSYGGMLAAWFRLKY------PHAALGALASSAPI 221 (246)
Q Consensus 178 ~~---~~~~~~~pvil~G~S~GG~laa~~~~~y------P~~v~g~v~ssapv 221 (246)
.+ +++.+..+++++|+|+||.+|+.++.+. |..+.++++.++.+
T Consensus 143 ~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 143 HQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 54 3455567899999999999999988753 35677777766543
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=98.80 E-value=7.4e-08 Score=85.32 Aligned_cols=121 Identities=17% Similarity=0.064 Sum_probs=71.8
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCC-------chhhhccc--cccCCCC-HHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGS-------RKEALKNA--STLGYFN-SAQAI 167 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~-------~~~~~~~~--~~l~~lt-~~q~l 167 (246)
+.|+++||+.++...+... .-+.+++...|+.||.+|..++|.-.+... ...-+.+. +.++-.. .+..+
T Consensus 48 Pvv~~lHG~~~~~~~~~~~-~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 48 PVLYWLSGLTCTDENFIQK-SGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CEEEEecCCCcChHHHHHh-hhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 4466778887776544322 223456667899999999877662111000 00000000 0110001 12344
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 168 TDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 168 ~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+++...++...... +..+++++||||||.+|++++.++|+.+.++++.++..
T Consensus 127 ~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 127 KELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 55555555543333 34579999999999999999999999999888777653
No 78
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.79 E-value=3.2e-08 Score=84.73 Aligned_cols=116 Identities=22% Similarity=0.211 Sum_probs=78.9
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
+.||++||..++.+.+....+ +.++|.+.|+.|+++|...-..... ++.-.+.... ....-...++.+++++
T Consensus 17 PLVv~LHG~~~~a~~~~~~s~-~~~lAd~~GfivvyP~~~~~~~~~~------cw~w~~~~~~-~g~~d~~~i~~lv~~v 88 (220)
T PF10503_consen 17 PLVVVLHGCGQSAEDFAAGSG-WNALADREGFIVVYPEQSRRANPQG------CWNWFSDDQQ-RGGGDVAFIAALVDYV 88 (220)
T ss_pred CEEEEeCCCCCCHHHHHhhcC-HHHHhhcCCeEEEcccccccCCCCC------cccccccccc-cCccchhhHHHHHHhH
Confidence 456778898888776554333 4678999999999998643211110 0000000000 0011234567788888
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
..+++.+..+|++.|.|.||+++..++..|||.+.++...|++.
T Consensus 89 ~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 89 AARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred hhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 88898899999999999999999999999999998877666543
No 79
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.77 E-value=1.6e-08 Score=85.25 Aligned_cols=93 Identities=17% Similarity=0.133 Sum_probs=67.7
Q ss_pred HHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHH
Q 025941 121 TDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLA 200 (246)
Q Consensus 121 ~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~la 200 (246)
..+..+.|+.|+.+|.||.+.... .+. .....-.....++|+...++++.++...+..++.++|+|+||.++
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g~g~------~~~--~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGGYGK------DFH--EAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSSSHH------HHH--HTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred HHHHHhCCEEEEEEcCCCCCccch------hHH--HhhhccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 455567899999999999663321 000 001111235678999999999988766677899999999999999
Q ss_pred HHHHHHCCCceeEEEEecCcc
Q 025941 201 AWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 201 a~~~~~yP~~v~g~v~ssapv 221 (246)
++++.++|+.++++++.+++.
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~ 99 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVS 99 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-S
T ss_pred chhhcccceeeeeeeccceec
Confidence 999999999999998766544
No 80
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.73 E-value=1.1e-07 Score=85.11 Aligned_cols=108 Identities=24% Similarity=0.272 Sum_probs=78.8
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
+.|+++||-+|+...-+ ...+.+.+.+.|+.||+++-||+|.+.-..+ .-| ++ -.-+|++.+++++
T Consensus 76 P~vVl~HGL~G~s~s~y--~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p----------~~y-h~-G~t~D~~~~l~~l 141 (345)
T COG0429 76 PLVVLFHGLEGSSNSPY--ARGLMRALSRRGWLVVVFHFRGCSGEANTSP----------RLY-HS-GETEDIRFFLDWL 141 (345)
T ss_pred ceEEEEeccCCCCcCHH--HHHHHHHHHhcCCeEEEEecccccCCcccCc----------cee-cc-cchhHHHHHHHHH
Confidence 46889999999887642 2345566677899999999999998853211 111 11 1228999999999
Q ss_pred HHHcCCCCCCEEEEecChHH-HHHHHHHHHCCC-ceeEEEEecCcc
Q 025941 178 KEKYNARHSPVIVIGGSYGG-MLAAWFRLKYPH-AALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG-~laa~~~~~yP~-~v~g~v~ssapv 221 (246)
++.. ...|+..+|.|+|| +|+.|+..+--+ .+.++++.|+|.
T Consensus 142 ~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 142 KARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred HHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 9866 46789999999999 777777765333 357888889886
No 81
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.68 E-value=2.5e-07 Score=88.72 Aligned_cols=110 Identities=12% Similarity=-0.048 Sum_probs=74.4
Q ss_pred CCCcEEEEeCCCCCCCcchhh-hHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCH-HHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISV-IGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNS-AQAITDYAEI 173 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~-~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~-~q~l~D~a~~ 173 (246)
.+.||+++||.-.....+... ..-+.+...+.|+.|+++|.|++|.|... .+. +.+.+++...
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~---------------~~~ddY~~~~i~~a 251 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQAD---------------KTFDDYIRDGVIAA 251 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccccc---------------CChhhhHHHHHHHH
Confidence 458999999865433322110 11234445567999999999999988531 112 2344557777
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHH----HHHHHHC-CCceeEEEEecCccc
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLA----AWFRLKY-PHAALGALASSAPIL 222 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~la----a~~~~~y-P~~v~g~v~ssapv~ 222 (246)
++.+.+..+ ..+++++|||+||.++ +.++... |+.+.++++.++|+-
T Consensus 252 l~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 252 LEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred HHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 777776653 4579999999999986 2345555 788999998888864
No 82
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.67 E-value=2.1e-07 Score=85.62 Aligned_cols=108 Identities=23% Similarity=0.286 Sum_probs=80.3
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIK 178 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~ 178 (246)
.|+++||-.|..... ....+...|++.|+.|+++.+||.|.|.-..++ .++ .-.-.|+.+++++++
T Consensus 127 ~vvilpGltg~S~~~--YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr-----------~f~-ag~t~Dl~~~v~~i~ 192 (409)
T KOG1838|consen 127 IVVILPGLTGGSHES--YVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPR-----------LFT-AGWTEDLREVVNHIK 192 (409)
T ss_pred EEEEecCCCCCChhH--HHHHHHHHHHhCCcEEEEECCCCCCCCccCCCc-----------eee-cCCHHHHHHHHHHHH
Confidence 355667877766652 234677888899999999999999988643221 111 123479999999999
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecCccc
Q 025941 179 EKYNARHSPVIVIGGSYGGMLAAWFRLKYPH--AALGALASSAPIL 222 (246)
Q Consensus 179 ~~~~~~~~pvil~G~S~GG~laa~~~~~yP~--~v~g~v~ssapv~ 222 (246)
+++ +..|...+|.||||++...+..+--+ .+.++++.+.|..
T Consensus 193 ~~~--P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 193 KRY--PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred HhC--CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 988 56789999999999999998876443 3567777777765
No 83
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.66 E-value=5e-08 Score=70.30 Aligned_cols=64 Identities=17% Similarity=0.137 Sum_probs=47.7
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCC-CHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYF-NSAQAITDYAEIL 174 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~l-t~~q~l~D~a~~i 174 (246)
+++.|+++||..+.+..+.. +.+...+.|+.|+++||||||+|.+. .++. +.++.++|+..++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~----~a~~L~~~G~~V~~~D~rGhG~S~g~------------rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAH----LAEFLAEQGYAVFAYDHRGHGRSEGK------------RGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHH----HHHHHHhCCCEEEEECCCcCCCCCCc------------ccccCCHHHHHHHHHHHh
Confidence 47788899999888776553 33444568999999999999999842 1222 4588999998876
Q ss_pred H
Q 025941 175 L 175 (246)
Q Consensus 175 ~ 175 (246)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 3
No 84
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.60 E-value=1.1e-07 Score=93.01 Aligned_cols=110 Identities=18% Similarity=0.134 Sum_probs=73.0
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc---ccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY---YGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg---yG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.|+++|||+.....+ ... +........|+.|+.++.|| ||+.-... +....+ ...++|+...++
T Consensus 396 ~i~~~hGGP~~~~~~-~~~-~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~-------~~~~~g----~~~~~D~~~~~~ 462 (620)
T COG1506 396 LIVYIHGGPSAQVGY-SFN-PEIQVLASAGYAVLAPNYRGSTGYGREFADA-------IRGDWG----GVDLEDLIAAVD 462 (620)
T ss_pred EEEEeCCCCcccccc-ccc-hhhHHHhcCCeEEEEeCCCCCCccHHHHHHh-------hhhccC----CccHHHHHHHHH
Confidence 366678998654442 111 23344456899999999995 44432110 001111 245678888888
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.+.+.-..+..++.++||||||.+++|.+.+.| .++++++..+++.
T Consensus 463 ~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 463 ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 665544456678999999999999999999999 7788877666553
No 85
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.59 E-value=3.1e-07 Score=77.72 Aligned_cols=100 Identities=19% Similarity=0.166 Sum_probs=67.8
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
+|+|++|++.|++..|.. +...+..+ ...|+.+++++.+...+ ...+.++.++++.+.|+..
T Consensus 1 ~~lf~~p~~gG~~~~y~~---la~~l~~~-~~~v~~i~~~~~~~~~~--------------~~~si~~la~~y~~~I~~~ 62 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRP---LARALPDD-VIGVYGIEYPGRGDDEP--------------PPDSIEELASRYAEAIRAR 62 (229)
T ss_dssp -EEEEESSTTCSGGGGHH---HHHHHTTT-EEEEEEECSTTSCTTSH--------------EESSHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHH---HHHhCCCC-eEEEEEEecCCCCCCCC--------------CCCCHHHHHHHHHHHhhhh
Confidence 479999999998877643 33333332 25799999999873332 1135778777766665443
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHH---CCCceeEEEEecCc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLK---YPHAALGALASSAP 220 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~---yP~~v~g~v~ssap 220 (246)
. ++.|.+++|||+||.||..++.+ .-..+..++++.+|
T Consensus 63 ---~--~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 63 ---Q--PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp ---T--SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred ---C--CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 2 23499999999999999988764 44557777776644
No 86
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.57 E-value=1.1e-06 Score=77.39 Aligned_cols=119 Identities=15% Similarity=0.080 Sum_probs=88.7
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHH--cCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAAR--FNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~--~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
-|+++.|++|-.+.|.. |+..+.+. -++.|+++.|.||-.+...... ..+.+.++.++.++-...+++.
T Consensus 4 li~~IPGNPGlv~fY~~---Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~------~~~~~~~sL~~QI~hk~~~i~~ 74 (266)
T PF10230_consen 4 LIVFIPGNPGLVEFYEE---FLSALYEKLNPQFEILGISHAGHSTSPSNSKF------SPNGRLFSLQDQIEHKIDFIKE 74 (266)
T ss_pred EEEEECCCCChHHHHHH---HHHHHHHhCCCCCeeEEecCCCCcCCcccccc------cCCCCccCHHHHHHHHHHHHHH
Confidence 35566699998887654 66666655 3779999999999877653211 1235667888888888888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCC---CceeEEEEecCcccccCC
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP---HAALGALASSAPILYFDD 226 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP---~~v~g~v~ssapv~~~~~ 226 (246)
...+...++.+++++|||.|+.+++.+..++| ..|.++++.-+-+....+
T Consensus 75 ~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~ 127 (266)
T PF10230_consen 75 LIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAK 127 (266)
T ss_pred HhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccC
Confidence 77654435678999999999999999999999 678888877666554443
No 87
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.50 E-value=2.9e-06 Score=74.57 Aligned_cols=111 Identities=14% Similarity=0.206 Sum_probs=81.1
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
.+.|+=+||-+|+...|. ++.....+.|.++|.+.+||+|.+...+ .+.|-+. +-..+.+.
T Consensus 35 ~gTVv~~hGsPGSH~DFk----Yi~~~l~~~~iR~I~iN~PGf~~t~~~~----------~~~~~n~-----er~~~~~~ 95 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFK----YIRPPLDEAGIRFIGINYPGFGFTPGYP----------DQQYTNE-----ERQNFVNA 95 (297)
T ss_pred ceeEEEecCCCCCccchh----hhhhHHHHcCeEEEEeCCCCCCCCCCCc----------ccccChH-----HHHHHHHH
Confidence 346888999999988764 6777778899999999999999987532 3344333 23355556
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc-ccccCCCCC
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP-ILYFDDITP 229 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap-v~~~~~~~~ 229 (246)
+.++++.+ .+++.+|||.|+-.|+.++..+| ..|+++.++| +...-.+.|
T Consensus 96 ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp 146 (297)
T PF06342_consen 96 LLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRP 146 (297)
T ss_pred HHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCH
Confidence 66666554 57999999999999999999997 4577766655 334445554
No 88
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.49 E-value=1.1e-06 Score=90.30 Aligned_cols=111 Identities=15% Similarity=0.028 Sum_probs=74.0
Q ss_pred CCCcEEEEeCCCCCCCcchhhh-HHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVI-GFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEIL 174 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~-g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i 174 (246)
.+.||+|+||.......|.... .-+.+...+.|+.|+++| +|.|.+.. .....+.++.+.++.+.+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~----------~~~~~~l~~~i~~l~~~l 132 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVE----------GGMERNLADHVVALSEAI 132 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhH----------cCccCCHHHHHHHHHHHH
Confidence 4579999999887776654321 112344445688999999 46654311 111245555556666666
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC-CCceeEEEEecCccc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKY-PHAALGALASSAPIL 222 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~y-P~~v~g~v~ssapv~ 222 (246)
+.+++.- ..+++++||||||++++.++..+ |+.|.++++.++|+.
T Consensus 133 ~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 133 DTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred HHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 6555432 24799999999999999888755 558999998888864
No 89
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.43 E-value=1.7e-06 Score=77.88 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=74.2
Q ss_pred CCCcEEEEeCCCCCCCcchh---hhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDIS---VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAE 172 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~---~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~ 172 (246)
+++=|++..|+.+..+.... ....+.+++++.+++|+.+.+||.|.|... .+.++.+.|...
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~---------------~s~~dLv~~~~a 200 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP---------------PSRKDLVKDYQA 200 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC---------------CCHHHHHHHHHH
Confidence 44566666677666554211 123577899999999999999999999742 345788999999
Q ss_pred HHHHHHHHc-CCCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 173 ILLYIKEKY-NARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 173 ~i~~l~~~~-~~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
.+++++++. +.+...+++.|||+||++++....+.+
T Consensus 201 ~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 201 CVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 999998754 344567999999999999999776654
No 90
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.40 E-value=9.8e-07 Score=77.46 Aligned_cols=87 Identities=18% Similarity=0.054 Sum_probs=65.5
Q ss_pred HHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHH
Q 025941 124 AARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWF 203 (246)
Q Consensus 124 a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~ 203 (246)
..+.||.||..|.||+|.|...- ... .++-.+|..+.|+++.++ ...+.+|-++|.||+|+.+...
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~------------~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~ 118 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEF------------DPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAA 118 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-------------TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHH
T ss_pred HHhCCCEEEEECCcccccCCCcc------------ccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHH
Confidence 45789999999999999998521 111 466779999999999886 5556789999999999999999
Q ss_pred HHHCCCceeEEEEecCccccc
Q 025941 204 RLKYPHAALGALASSAPILYF 224 (246)
Q Consensus 204 ~~~yP~~v~g~v~ssapv~~~ 224 (246)
+...|..+++++..+++.-..
T Consensus 119 A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 119 AARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HTTT-TTEEEEEEESE-SBTC
T ss_pred HhcCCCCceEEEecccCCccc
Confidence 998888889988776655333
No 91
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.39 E-value=3e-06 Score=75.63 Aligned_cols=105 Identities=18% Similarity=0.146 Sum_probs=72.2
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
.+.|+++|||.+....-.........++...|+.|+.+|+|---+- +...+++|+...+++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-------------------~~p~~~~d~~~a~~~ 139 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-------------------PFPAALEDAYAAYRW 139 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-------------------CCCchHHHHHHHHHH
Confidence 3556777888876665433335777888899999999999953222 122456666666666
Q ss_pred HHHH---cCCCCCCEEEEecChHHHHHHHHHHHCCC----ceeEEEEecCc
Q 025941 177 IKEK---YNARHSPVIVIGGSYGGMLAAWFRLKYPH----AALGALASSAP 220 (246)
Q Consensus 177 l~~~---~~~~~~pvil~G~S~GG~laa~~~~~yP~----~v~g~v~ssap 220 (246)
+.++ ++.+..+++++|+|-||.|++.++..-.+ ...+.++.++.
T Consensus 140 l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 140 LRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 6644 55667889999999999999998875443 34555555543
No 92
>PRK10115 protease 2; Provisional
Probab=98.35 E-value=1.7e-06 Score=85.73 Aligned_cols=114 Identities=15% Similarity=0.063 Sum_probs=74.2
Q ss_pred CcEE-EEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 98 APIF-VYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 98 ~pI~-l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
.|++ +.|||.+......- .....-+ ...|+.|+....||-|+=.. .+-+... ...-....+|+...+++
T Consensus 445 ~P~ll~~hGg~~~~~~p~f-~~~~~~l-~~rG~~v~~~n~RGs~g~G~------~w~~~g~--~~~k~~~~~D~~a~~~~ 514 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADF-SFSRLSL-LDRGFVYAIVHVRGGGELGQ------QWYEDGK--FLKKKNTFNDYLDACDA 514 (686)
T ss_pred CCEEEEEECCCCCCCCCCc-cHHHHHH-HHCCcEEEEEEcCCCCccCH------HHHHhhh--hhcCCCcHHHHHHHHHH
Confidence 3544 55788876643111 1112223 35799999999998332211 0000000 01112567888888888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+.++--.+..++.+.|+|+||.++++...++|+++.++|+..+.+
T Consensus 515 Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 515 LLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred HHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 877644567799999999999999999999999999998765544
No 93
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.35 E-value=3.7e-07 Score=76.57 Aligned_cols=107 Identities=21% Similarity=0.153 Sum_probs=74.6
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
..|+++.|.-|+.+..+. ..+..+-+.....||++|.||||.|.|.. +-+..+-..+|....++-+
T Consensus 43 ~~iLlipGalGs~~tDf~--pql~~l~k~l~~TivawDPpGYG~SrPP~------------Rkf~~~ff~~Da~~avdLM 108 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFP--PQLLSLFKPLQVTIVAWDPPGYGTSRPPE------------RKFEVQFFMKDAEYAVDLM 108 (277)
T ss_pred ceeEecccccccccccCC--HHHHhcCCCCceEEEEECCCCCCCCCCCc------------ccchHHHHHHhHHHHHHHH
Confidence 457777888887765443 13334444445699999999999999742 1133444555554444433
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+. + +-.|+.++|+|-||..|...+.|+|+.|...++.+|-.
T Consensus 109 ~a-L--k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a 149 (277)
T KOG2984|consen 109 EA-L--KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA 149 (277)
T ss_pred HH-h--CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc
Confidence 32 2 23579999999999999999999999999988777654
No 94
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.31 E-value=1.4e-06 Score=80.66 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=56.1
Q ss_pred CCeEEEEccccccCCC-CC-CCchhhhcccc-------ccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCE-EEEecChHH
Q 025941 128 NALLVYIEHRYYGKSI-PF-GSRKEALKNAS-------TLGYFNSAQAITDYAEILLYIKEKYNARHSPV-IVIGGSYGG 197 (246)
Q Consensus 128 g~~vv~~d~RgyG~S~-p~-~~~~~~~~~~~-------~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pv-il~G~S~GG 197 (246)
.+-||++|.-|=|.|+ |. ++...+..++. +...++.++.++|+..+++++ +. .++ +++||||||
T Consensus 99 ~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l----gi--~~~~~vvG~SmGG 172 (389)
T PRK06765 99 KYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL----GI--ARLHAVMGPSMGG 172 (389)
T ss_pred ceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc----CC--CCceEEEEECHHH
Confidence 4689999999866532 21 11000000111 122256777777777776654 33 246 499999999
Q ss_pred HHHHHHHHHCCCceeEEEEecC
Q 025941 198 MLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 198 ~laa~~~~~yP~~v~g~v~ssa 219 (246)
++|..++.+||+.|.++|+.++
T Consensus 173 ~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 173 MQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred HHHHHHHHHChHhhheEEEEec
Confidence 9999999999999999997654
No 95
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.31 E-value=9.6e-07 Score=81.67 Aligned_cols=111 Identities=21% Similarity=0.223 Sum_probs=68.8
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
..|++++.||-....... ...+.+.+...|..++++|.+|.|.|...+ . + + .+-...+ .++++
T Consensus 189 p~P~VIv~gGlDs~qeD~--~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~-l----~--~--D~~~l~~------aVLd~ 251 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDL--YRLFRDYLAPRGIAMLTVDMPGQGESPKWP-L----T--Q--DSSRLHQ------AVLDY 251 (411)
T ss_dssp -EEEEEEE--TTS-GGGG--HHHHHCCCHHCT-EEEEE--TTSGGGTTT--S-------S---CCHHHH------HHHHH
T ss_pred CCCEEEEeCCcchhHHHH--HHHHHHHHHhCCCEEEEEccCCCcccccCC-C----C--c--CHHHHHH------HHHHH
Confidence 469999998887766432 124445555789999999999999985321 1 0 0 1111122 34445
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYF 224 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~ 224 (246)
+...--.+..+|.++|-|+||.+|..++...++.++++|..+|++..+
T Consensus 252 L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 252 LASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF 299 (411)
T ss_dssp HHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG
T ss_pred HhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh
Confidence 554333466789999999999999999999999999999999987544
No 96
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.31 E-value=2.8e-06 Score=79.86 Aligned_cols=86 Identities=14% Similarity=0.076 Sum_probs=65.2
Q ss_pred HHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHH
Q 025941 122 DNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAA 201 (246)
Q Consensus 122 ~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa 201 (246)
+...+.|+.+ ..|++|+|.+.+.. ...++.+++++..++.+.+..+ ..|++++||||||.++.
T Consensus 115 ~~L~~~GY~~-~~dL~g~gYDwR~~--------------~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 115 EQLIKWGYKE-GKTLFGFGYDFRQS--------------NRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVK 177 (440)
T ss_pred HHHHHcCCcc-CCCcccCCCCcccc--------------ccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHH
Confidence 4444567644 78999999886421 1235677899999998887653 46899999999999999
Q ss_pred HHHHHCCCc----eeEEEEecCccccc
Q 025941 202 WFRLKYPHA----ALGALASSAPILYF 224 (246)
Q Consensus 202 ~~~~~yP~~----v~g~v~ssapv~~~ 224 (246)
.++.++|+. |+..|..++|....
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 999999974 67778888886543
No 97
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=4.2e-06 Score=80.28 Aligned_cols=117 Identities=26% Similarity=0.332 Sum_probs=75.4
Q ss_pred CCCcEEEEe-CCCCCCCcc--hhhhHHH-HHHHHHcCCeEEEEccccccCC-CCCCCchhhhccccccCCCCHHHHHHHH
Q 025941 96 ANAPIFVYL-GAEESLDGD--ISVIGFL-TDNAARFNALLVYIEHRYYGKS-IPFGSRKEALKNASTLGYFNSAQAITDY 170 (246)
Q Consensus 96 ~~~pI~l~~-Gg~~~~~~~--~~~~g~~-~~~a~~~g~~vv~~d~RgyG~S-~p~~~~~~~~~~~~~l~~lt~~q~l~D~ 170 (246)
.+-|.+++. ||++---.. +.....+ ....+..|+.|+++|-||.-.- ..|.+ ..+ ..+++.. ++|.
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~---~ik--~kmGqVE----~eDQ 710 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFES---HIK--KKMGQVE----VEDQ 710 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHH---HHh--hccCeee----ehhh
Confidence 346777766 888742211 1111111 1223468999999999984321 11211 111 2344433 3556
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 171 AEILLYIKEKYN-ARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 171 a~~i~~l~~~~~-~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.+-++.+.++++ .+-.+|.+-|+||||.|++....+||+.++.||+ +|||-
T Consensus 711 Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA-GapVT 762 (867)
T KOG2281|consen 711 VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA-GAPVT 762 (867)
T ss_pred HHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEec-cCcce
Confidence 666777777774 4556899999999999999999999999999987 66763
No 98
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.26 E-value=4.5e-06 Score=71.46 Aligned_cols=92 Identities=12% Similarity=0.087 Sum_probs=53.0
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCe---EEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNAL---LVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEIL 174 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~---vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i 174 (246)
.||||+||..++....|. .+.+..++.||. |+++++-....+.. . .... .. .+.+++++.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~---~~~~~l~~~GY~~~~vya~tyg~~~~~~~---~-------~~~~-~~-~~~~~~l~~fI 66 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS---TLAPYLKAAGYCDSEVYALTYGSGNGSPS---V-------QNAH-MS-CESAKQLRAFI 66 (219)
T ss_dssp --EEEE--TTTTTCGGCC---HHHHHHHHTT--CCCEEEE--S-CCHHTH---H-------HHHH-B--HHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHH---HHHHHHHHcCCCcceeEeccCCCCCCCCc---c-------cccc-cc-hhhHHHHHHHH
Confidence 699999999885544332 445555677887 78887632221110 0 0001 12 24448899999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKY 207 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~y 207 (246)
+.+.+.-+ . +|-|+||||||+++-++.+.-
T Consensus 67 ~~Vl~~TG--a-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 67 DAVLAYTG--A-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHT-----EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHhhC--C-EEEEEEcCCcCHHHHHHHHHc
Confidence 99887663 3 799999999999999998754
No 99
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.16 E-value=1.3e-05 Score=72.22 Aligned_cols=98 Identities=22% Similarity=0.380 Sum_probs=65.0
Q ss_pred HcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025941 126 RFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 126 ~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~ 205 (246)
+.||.|+.+.|+||+.|...+-. .+...++ | .+++.....++.....+|++|+|.||+-++|.+.
T Consensus 266 ~lgYsvLGwNhPGFagSTG~P~p------------~n~~nA~-D--aVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs 330 (517)
T KOG1553|consen 266 QLGYSVLGWNHPGFAGSTGLPYP------------VNTLNAA-D--AVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAAS 330 (517)
T ss_pred HhCceeeccCCCCccccCCCCCc------------ccchHHH-H--HHHHHHHHHcCCCccceEEEEeecCCchHHHHhh
Confidence 57999999999999999854311 0111222 2 2334444444444445999999999999999999
Q ss_pred HCCCceeEEEEecCcccccCCCCC------chhhHHHHHHHHHh
Q 025941 206 KYPHAALGALASSAPILYFDDITP------QNGYYSIVTRDFRV 243 (246)
Q Consensus 206 ~yP~~v~g~v~ssapv~~~~~~~~------~~~y~~~v~~~~~~ 243 (246)
.||+. +++|+-.. ++|..+ +..|.-+|+...|.
T Consensus 331 ~YPdV-kavvLDAt----FDDllpLAl~rMP~~~~giV~~aiRn 369 (517)
T KOG1553|consen 331 NYPDV-KAVVLDAT----FDDLLPLALFRMPTFFSGIVEHAIRN 369 (517)
T ss_pred cCCCc-eEEEeecc----hhhhhhHHhhhchHHHHHHHHHHHHH
Confidence 99995 77776542 555433 45555566665553
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.14 E-value=7.6e-06 Score=70.07 Aligned_cols=92 Identities=22% Similarity=0.223 Sum_probs=68.5
Q ss_pred EEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHH
Q 025941 101 FVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEK 180 (246)
Q Consensus 101 ~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~ 180 (246)
+++-|+.+-.+.+.. -+...|.+.|+.|.+.|+||-|+|.|.... ....+| .+-+..|+...+..+++.
T Consensus 33 ~~va~a~Gv~~~fYR---rfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~------~~~~~~--~DwA~~D~~aal~~~~~~ 101 (281)
T COG4757 33 LVVAGATGVGQYFYR---RFAAAAAKAGFEVLTFDYRGIGQSRPASLS------GSQWRY--LDWARLDFPAALAALKKA 101 (281)
T ss_pred EEecccCCcchhHhH---HHHHHhhccCceEEEEecccccCCCccccc------cCccch--hhhhhcchHHHHHHHHhh
Confidence 455566665555443 567788889999999999999999985421 122333 467889999999999886
Q ss_pred cCCCCCCEEEEecChHHHHHHHHHH
Q 025941 181 YNARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 181 ~~~~~~pvil~G~S~GG~laa~~~~ 205 (246)
. +..|...+||||||.+.-.+.+
T Consensus 102 ~--~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 102 L--PGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred C--CCCceEEeeccccceeeccccc
Confidence 5 5678999999999987665544
No 101
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.12 E-value=1.9e-05 Score=69.82 Aligned_cols=117 Identities=19% Similarity=0.241 Sum_probs=80.4
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCC-CCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSI-PFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~-p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
..+|++||..++........| +.++|.+.|+.|+++|. +.++- +..-. ..+...+.. .-..-+.++.+++..
T Consensus 62 pLvv~LHG~~~sgag~~~~sg-~d~lAd~~gFlV~yPdg--~~~~wn~~~~~-~~~~p~~~~---~g~ddVgflr~lva~ 134 (312)
T COG3509 62 PLVVVLHGSGGSGAGQLHGTG-WDALADREGFLVAYPDG--YDRAWNANGCG-NWFGPADRR---RGVDDVGFLRALVAK 134 (312)
T ss_pred CEEEEEecCCCChHHhhcccc-hhhhhcccCcEEECcCc--cccccCCCccc-ccCCccccc---CCccHHHHHHHHHHH
Confidence 457788999988877655444 46889999999999943 22222 10000 000000001 112345677888889
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+..+++.+..+|++.|=|-||.++.+++..+|+.+.++-..++++
T Consensus 135 l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 135 LVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 999999998999999999999999999999999987765555444
No 102
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.06 E-value=5.6e-05 Score=68.52 Aligned_cols=147 Identities=19% Similarity=0.304 Sum_probs=96.3
Q ss_pred CceeeEEEeecCCCC--CCCCCCCeEEEEEEEeccccCCCCCCCCCCcEEEEeCCCCCCCcchhhhHH-HHHHHHHcCCe
Q 025941 54 DFQTFYYNQTLDHFN--YRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGF-LTDNAARFNAL 130 (246)
Q Consensus 54 ~~~~~~~~q~lDhf~--~~~~~~~tF~qry~~~~~~~~~g~~~~~~~pI~l~~Gg~~~~~~~~~~~g~-~~~~a~~~g~~ 130 (246)
.+.+..|..|+++.- .-|...++=.-+++. .+-|+. +.+||.+...|.|+...+.. ..+ ...++++ |..
T Consensus 52 ~~~eG~F~SP~~~~~~~~lP~es~~a~~~~~~-P~~~~~-----~~rp~~IhLagTGDh~f~rR-~~l~a~pLl~~-gi~ 123 (348)
T PF09752_consen 52 KIREGEFRSPLAFYLPGLLPEESRTARFQLLL-PKRWDS-----PYRPVCIHLAGTGDHGFWRR-RRLMARPLLKE-GIA 123 (348)
T ss_pred EEEEeEeCCchhhhccccCChhHhheEEEEEE-CCcccc-----CCCceEEEecCCCccchhhh-hhhhhhHHHHc-Ccc
Confidence 467888999977642 234444443333444 444432 34788876678888654433 233 3456666 999
Q ss_pred EEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc
Q 025941 131 LVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHA 210 (246)
Q Consensus 131 vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~ 210 (246)
-+.+|.+|||.=.|.......+.+.+++ .+-..+.+.+...++.+++++ + -.|+-+.|-||||.+|+..+...|..
T Consensus 124 s~~le~Pyyg~RkP~~Q~~s~l~~VsDl-~~~g~~~i~E~~~Ll~Wl~~~-G--~~~~g~~G~SmGG~~A~laa~~~p~p 199 (348)
T PF09752_consen 124 SLILENPYYGQRKPKDQRRSSLRNVSDL-FVMGRATILESRALLHWLERE-G--YGPLGLTGISMGGHMAALAASNWPRP 199 (348)
T ss_pred eEEEecccccccChhHhhcccccchhHH-HHHHhHHHHHHHHHHHHHHhc-C--CCceEEEEechhHhhHHhhhhcCCCc
Confidence 9999999999988754321111111111 011256678888888898876 3 35899999999999999999999996
Q ss_pred ee
Q 025941 211 AL 212 (246)
Q Consensus 211 v~ 212 (246)
+.
T Consensus 200 v~ 201 (348)
T PF09752_consen 200 VA 201 (348)
T ss_pred ee
Confidence 53
No 103
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.05 E-value=2.2e-05 Score=82.32 Aligned_cols=99 Identities=13% Similarity=-0.010 Sum_probs=71.2
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.|++++||+.+....|.. +...+.. ++.|+.++.+|+|.+.+. ..+.++.++|+...++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~---l~~~l~~--~~~v~~~~~~g~~~~~~~--------------~~~l~~la~~~~~~i~~ 1128 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSV---LSRYLDP--QWSIYGIQSPRPDGPMQT--------------ATSLDEVCEAHLATLLE 1128 (1296)
T ss_pred CCCeEEecCCCCchHHHHH---HHHhcCC--CCcEEEEECCCCCCCCCC--------------CCCHHHHHHHHHHHHHh
Confidence 4689999999887765432 3333322 569999999999865321 13667888888777665
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHH---CCCceeEEEEecC
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLK---YPHAALGALASSA 219 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~---yP~~v~g~v~ssa 219 (246)
+. ...|++++||||||.+|..++.+ .|+.+..+++..+
T Consensus 1129 ~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1129 QQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred hC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 32 23589999999999999999885 6888888776543
No 104
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.04 E-value=7.1e-05 Score=70.96 Aligned_cols=84 Identities=19% Similarity=0.202 Sum_probs=58.7
Q ss_pred CCeEEEEcc-ccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHHHHH
Q 025941 128 NALLVYIEH-RYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNA-RHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 128 g~~vv~~d~-RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~-~~~pvil~G~S~GG~laa~~~~ 205 (246)
.+.++++|+ +|+|.|..... . ...+.+++++|+.++++.+.++++. .+.|++++||||||..+..++.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~---------~-~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA---------D-YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC---------C-CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 368999996 69999874211 1 1234588999999999988766642 4679999999999998866654
Q ss_pred HC----------CCceeEEEEecCcc
Q 025941 206 KY----------PHAALGALASSAPI 221 (246)
Q Consensus 206 ~y----------P~~v~g~v~ssapv 221 (246)
+- +=.++|+++..+.+
T Consensus 191 ~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 191 RINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHhhccccCCceeeeEEEEEecccc
Confidence 41 11357777655543
No 105
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.03 E-value=9.5e-05 Score=67.21 Aligned_cols=110 Identities=23% Similarity=0.230 Sum_probs=73.6
Q ss_pred CcEEEEeCCCCCCCc--chhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDG--DISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~--~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
+-||+||||++..+. ....-.+...++.+.++.||.+|+|=-=+. |+ .-+.+|....++
T Consensus 91 p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-~~------------------Pa~y~D~~~Al~ 151 (336)
T KOG1515|consen 91 PVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-PF------------------PAAYDDGWAALK 151 (336)
T ss_pred eEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC-CC------------------CccchHHHHHHH
Confidence 457788999887663 233346788889999999999999931111 01 123345555555
Q ss_pred HHHH----HcCCCCCCEEEEecChHHHHHHHHHHHC------CCceeEEEEecCcccccCC
Q 025941 176 YIKE----KYNARHSPVIVIGGSYGGMLAAWFRLKY------PHAALGALASSAPILYFDD 226 (246)
Q Consensus 176 ~l~~----~~~~~~~pvil~G~S~GG~laa~~~~~y------P~~v~g~v~ssapv~~~~~ 226 (246)
++.+ ++..+.+++++.|-|-||.||..++++. +..++|.|+..+-....+.
T Consensus 152 w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 152 WVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred HHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 5544 2455667899999999999998887652 4568899887755544443
No 106
>COG0400 Predicted esterase [General function prediction only]
Probab=98.02 E-value=3e-05 Score=65.82 Aligned_cols=55 Identities=31% Similarity=0.344 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
...+.++++++.+.++++.+..+++++|.|=|+++++.+..++|+.+.++++.++
T Consensus 78 ~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g 132 (207)
T COG0400 78 LETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSG 132 (207)
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCC
Confidence 3445566777777778888888999999999999999999999999999998765
No 107
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.02 E-value=1.1e-05 Score=68.19 Aligned_cols=113 Identities=16% Similarity=0.164 Sum_probs=68.7
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCC-CCCCCchhhhccccccCCC---CHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKS-IPFGSRKEALKNASTLGYF---NSAQAITDYAE 172 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S-~p~~~~~~~~~~~~~l~~l---t~~q~l~D~a~ 172 (246)
.+.||++|+..|-. .....+.+...+.|+.|+++|. +.|.. .+....+ . ...+..+ ..++..+|+..
T Consensus 14 ~~~Vvv~~d~~G~~----~~~~~~ad~lA~~Gy~v~~pD~-f~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~a 84 (218)
T PF01738_consen 14 RPAVVVIHDIFGLN----PNIRDLADRLAEEGYVVLAPDL-FGGRGAPPSDPEE-A---FAAMRELFAPRPEQVAADLQA 84 (218)
T ss_dssp EEEEEEE-BTTBS-----HHHHHHHHHHHHTT-EEEEE-C-CCCTS--CCCHHC-H---HHHHHHCHHHSHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCc----hHHHHHHHHHHhcCCCEEeccc-ccCCCCCccchhh-H---HHHHHHHHhhhHHHHHHHHHH
Confidence 45678888765533 1122334444567999999998 44554 2322110 0 0011101 14678889988
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
.++.++++...+..++.++|.|+||.++..++... +.+++++..-+
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 99999876544567899999999999999998887 56677776444
No 108
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=97.99 E-value=3.7e-05 Score=65.29 Aligned_cols=106 Identities=14% Similarity=0.184 Sum_probs=73.8
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
....++++||.-++-..-.. ..++...+++|+.++=+|.||-|+|...- ..+-.+.+ ++|+..+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~--~~vA~~~e~~gis~fRfDF~GnGeS~gsf----------~~Gn~~~e--adDL~sV~q 97 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIM--KNVAKALEKEGISAFRFDFSGNGESEGSF----------YYGNYNTE--ADDLHSVIQ 97 (269)
T ss_pred CceEEEEeeccccccchHHH--HHHHHHHHhcCceEEEEEecCCCCcCCcc----------ccCcccch--HHHHHHHHH
Confidence 34678899998887654221 23344445789999999999999997521 11212222 289999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
++.... ..--+++|||-||-++..++.||++ +.-+|..|+
T Consensus 98 ~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsG 137 (269)
T KOG4667|consen 98 YFSNSN---RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSG 137 (269)
T ss_pred HhccCc---eEEEEEEeecCccHHHHHHHHhhcC-chheEEccc
Confidence 987521 2223678999999999999999998 455555554
No 109
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.97 E-value=8.7e-05 Score=63.69 Aligned_cols=49 Identities=27% Similarity=0.411 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+++..+.+++.....++.+.|+||||..|+.++.+||+.+.++++.|+.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 5667777777654444999999999999999999999999999988853
No 110
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.95 E-value=3.4e-05 Score=69.72 Aligned_cols=118 Identities=17% Similarity=0.113 Sum_probs=67.8
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCC-Cch-hhhc-----cccc-cCCCCHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFG-SRK-EALK-----NAST-LGYFNSAQAITDY 170 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~-~~~-~~~~-----~~~~-l~~lt~~q~l~D~ 170 (246)
.||.+||..+....+.. ...++ ..|+.|+.+|-||.|...+.. ... ...+ ..++ .+-+-...++.|+
T Consensus 85 avv~~hGyg~~~~~~~~----~~~~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 85 AVVQFHGYGGRSGDPFD----LLPWA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp EEEEE--TT--GGGHHH----HHHHH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred EEEEecCCCCCCCCccc----ccccc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 36677887776443322 12233 579999999999999432211 000 0000 0000 1111124567898
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 171 AEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 171 a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
...++.++.....+..++.+.|+|.||.+++..+...|. |+++++..+-++
T Consensus 160 ~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~vP~l~ 210 (320)
T PF05448_consen 160 VRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADVPFLC 210 (320)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEESESSS
T ss_pred HHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecCCCcc
Confidence 888888886544567799999999999999999999876 788877655443
No 111
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.94 E-value=2.9e-05 Score=77.61 Aligned_cols=120 Identities=19% Similarity=0.150 Sum_probs=79.7
Q ss_pred CCcEEEE-eCCCCCCCcchh-hhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHH
Q 025941 97 NAPIFVY-LGAEESLDGDIS-VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEIL 174 (246)
Q Consensus 97 ~~pI~l~-~Gg~~~~~~~~~-~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i 174 (246)
+-|+++. |||+++...... ..++...++...|+.|+.+|.||-|...+.- ..++ ..+++. .-++|....+
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~--~~~~--~~~lG~----~ev~D~~~~~ 596 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDF--RSAL--PRNLGD----VEVKDQIEAV 596 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhH--HHHh--hhhcCC----cchHHHHHHH
Confidence 4566555 588874333211 1345555677889999999999976543210 0000 123332 3456777777
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYF 224 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~ 224 (246)
+.+.+..-.+..++.++|+||||.+++.+..++|+.+.++-++-+||...
T Consensus 597 ~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~ 646 (755)
T KOG2100|consen 597 KKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDW 646 (755)
T ss_pred HHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeee
Confidence 77777666678899999999999999999999996666664556777544
No 112
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.93 E-value=8.7e-05 Score=61.16 Aligned_cols=53 Identities=19% Similarity=0.185 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHH-HHCCCceeEEEEecCccc
Q 025941 170 YAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFR-LKYPHAALGALASSAPIL 222 (246)
Q Consensus 170 ~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~-~~yP~~v~g~v~ssapv~ 222 (246)
+.+-++.+.+.....+.+++++|||+|...++.++ ...+..|.|+++.+++-.
T Consensus 39 ~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 39 LDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 33444555554443456799999999999999999 778889999999887754
No 113
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.93 E-value=3.3e-05 Score=73.25 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=69.2
Q ss_pred CCc-EEEEeCCCCCCCcchhhhHHHHHHHHHcC-CeEEEEccc-c---ccCCCCCCCchhhhccccccCCCCHHHHHHHH
Q 025941 97 NAP-IFVYLGAEESLDGDISVIGFLTDNAARFN-ALLVYIEHR-Y---YGKSIPFGSRKEALKNASTLGYFNSAQAITDY 170 (246)
Q Consensus 97 ~~p-I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g-~~vv~~d~R-g---yG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~ 170 (246)
+.| ||++|||.......... ....++.+.+ +.||.+++| | |+.+... -......+.|.
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~--------------~~~~n~g~~D~ 157 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI--------------ELPGNYGLKDQ 157 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC--------------CCCcchhHHHH
Confidence 345 55667775433321110 1234444444 899999999 3 2222100 01223467788
Q ss_pred HHHHHHHHHHc---CCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCccc
Q 025941 171 AEILLYIKEKY---NARHSPVIVIGGSYGGMLAAWFRLK--YPHAALGALASSAPIL 222 (246)
Q Consensus 171 a~~i~~l~~~~---~~~~~pvil~G~S~GG~laa~~~~~--yP~~v~g~v~ssapv~ 222 (246)
...+++++++. +.+..+|.++|+|.||.++.++... .+.+++++|+.|++..
T Consensus 158 ~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 158 RLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 88888887653 4566789999999999999888776 3567889998776554
No 114
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.92 E-value=5e-05 Score=66.52 Aligned_cols=121 Identities=15% Similarity=0.188 Sum_probs=69.5
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHH-HcC----CeEEEEcccc----ccCCCC---CCCchhhhccccccCCCCH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAA-RFN----ALLVYIEHRY----YGKSIP---FGSRKEALKNASTLGYFNS 163 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~-~~g----~~vv~~d~Rg----yG~S~p---~~~~~~~~~~~~~l~~lt~ 163 (246)
...|.||+||..|+...+.. |.+-+. +.| ..++-++--| .|.=.. .+-....+++..+ -+.
T Consensus 10 ~~tPTifihG~~gt~~s~~~----mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~---~~~ 82 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNH----MINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRN---ANY 82 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHH----HHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT----CHH
T ss_pred CCCcEEEECCCCCChhHHHH----HHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCc---CCH
Confidence 34799999999998877643 333332 222 2344443333 233111 0000011121111 234
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-----ceeEEEEecCcccccC
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH-----AALGALASSAPILYFD 225 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~-----~v~g~v~ssapv~~~~ 225 (246)
.+-.+-+..++..+++++..+ ++-++||||||+.++.++..|-. .+...|..++|.....
T Consensus 83 ~~qa~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 566677888999999988764 59999999999999999988653 4789999999976554
No 115
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.92 E-value=4.5e-05 Score=69.37 Aligned_cols=118 Identities=15% Similarity=0.190 Sum_probs=68.7
Q ss_pred CCcEEEEeCCCCCCCcchh----hhHHHHHHH------HHcCCeEEEEcccccc--CCCCCCCchhhhccccccCCCC--
Q 025941 97 NAPIFVYLGAEESLDGDIS----VIGFLTDNA------ARFNALLVYIEHRYYG--KSIPFGSRKEALKNASTLGYFN-- 162 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~----~~g~~~~~a------~~~g~~vv~~d~RgyG--~S~p~~~~~~~~~~~~~l~~lt-- 162 (246)
...|+++|+..|+...... ..||..++. .-..+-||+.+--|.+ .+.|... ++...-|-+
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~------~p~g~~yg~~F 124 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI------NPGGKPYGSDF 124 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc------CCCCCccccCC
Confidence 3467888887774432110 013443331 1224589999999854 4445321 111001111
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCE-EEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 163 SAQAITDYAEILLYIKEKYNARHSPV-IVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 163 ~~q~l~D~a~~i~~l~~~~~~~~~pv-il~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
..-.++|..++-+.+.+.++.+. + .++|+|||||.|+..+..|||.|+.++..++...
T Consensus 125 P~~ti~D~V~aq~~ll~~LGI~~--l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r 183 (368)
T COG2021 125 PVITIRDMVRAQRLLLDALGIKK--LAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR 183 (368)
T ss_pred CcccHHHHHHHHHHHHHhcCcce--EeeeeccChHHHHHHHHHHhChHHHhhhheeccccc
Confidence 12344555555555556665433 4 4899999999999999999999998886655443
No 116
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.89 E-value=4e-05 Score=67.12 Aligned_cols=99 Identities=14% Similarity=0.134 Sum_probs=66.5
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
.|+|++|+..|....|.. +...+... ..|+.++-|++|.-.. ..-+.+++++.+...|..+
T Consensus 1 ~pLF~fhp~~G~~~~~~~---L~~~l~~~--~~v~~l~a~g~~~~~~--------------~~~~l~~~a~~yv~~Ir~~ 61 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAP---LAAALGPL--LPVYGLQAPGYGAGEQ--------------PFASLDDMAAAYVAAIRRV 61 (257)
T ss_pred CCEEEEcCCCCcHHHHHH---HHHHhccC--ceeeccccCccccccc--------------ccCCHHHHHHHHHHHHHHh
Confidence 479999999888776654 33333333 3789999999874221 1124567766666655544
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHH---CCCceeEEEEecCc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLK---YPHAALGALASSAP 220 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~---yP~~v~g~v~ssap 220 (246)
. +..|+.+.|+|+||.+|..++.+ --+.|.-+++.-++
T Consensus 62 Q-----P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 62 Q-----PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred C-----CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 2 45799999999999999988765 44566666654443
No 117
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.88 E-value=6.6e-05 Score=63.58 Aligned_cols=58 Identities=22% Similarity=0.319 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
+++++-+.++|+...+ ...+..++++.|.|.||++|+.++.++|+.+.|+++.|+.+.
T Consensus 84 ~~s~~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 84 EESAERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 3344445555555443 235667899999999999999999999999999999887653
No 118
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.88 E-value=1.8e-05 Score=71.86 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=77.8
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHH-----HHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDN-----AARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYA 171 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~-----a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a 171 (246)
-.|++++||.+|+...+...+..+.+- -.++-+.||++..+|||-|... ...-++.. .+|
T Consensus 152 v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~-----------sk~GFn~~----a~A 216 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP-----------SKTGFNAA----ATA 216 (469)
T ss_pred ccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC-----------ccCCccHH----HHH
Confidence 369999999999998876644444332 2234468999999999999742 12223433 345
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
.+++.+.-.++. .+.++-|+-||..++..++..||+.|.|.-+.-+++
T Consensus 217 rvmrkLMlRLg~--nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 217 RVMRKLMLRLGY--NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred HHHHHHHHHhCc--ceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 566666655654 359999999999999999999999999987654443
No 119
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.87 E-value=0.0001 Score=74.01 Aligned_cols=88 Identities=16% Similarity=0.066 Sum_probs=67.2
Q ss_pred HHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHc--------------CCCC
Q 025941 120 LTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKY--------------NARH 185 (246)
Q Consensus 120 ~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~--------------~~~~ 185 (246)
+.+.....||.||..|.||.|.|..... .. ..+-.+|...+|+++..+. .-.+
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~------------~~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~Wsn 337 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPT------------TG-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSN 337 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCc------------cC-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCC
Confidence 3455567899999999999999986321 01 1456679999999998531 1125
Q ss_pred CCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 186 SPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 186 ~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
.+|-++|.||||.++...+...|+.++++|..++.
T Consensus 338 GkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 338 GKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred CeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 68999999999999999999999888888875543
No 120
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.85 E-value=0.00032 Score=62.70 Aligned_cols=114 Identities=12% Similarity=0.139 Sum_probs=67.0
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
...+++++||-++.--......-+.+.....+..|+-+.++.-. ..+++-+.++-++|++.++++
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy---------------~G~G~~SL~~D~~eI~~~v~y 96 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSY---------------SGWGTSSLDRDVEEIAQLVEY 96 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGB---------------TTS-S--HHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCcc---------------CCcCcchhhhHHHHHHHHHHH
Confidence 35688888888775433332223444444568899998877411 123444678999999999999
Q ss_pred HHHHcCC--CCCCEEEEecChHHHHHHHHHHHCC-----CceeEEEEecCcccccCC
Q 025941 177 IKEKYNA--RHSPVIVIGGSYGGMLAAWFRLKYP-----HAALGALASSAPILYFDD 226 (246)
Q Consensus 177 l~~~~~~--~~~pvil~G~S~GG~laa~~~~~yP-----~~v~g~v~ssapv~~~~~ 226 (246)
++...+. ...+++|+|||-|-.-++.+..+.. ..|+|+|+ -|||-.-+-
T Consensus 97 lr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~IL-QApVSDREa 152 (303)
T PF08538_consen 97 LRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAIL-QAPVSDREA 152 (303)
T ss_dssp HHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEE-EEE---TTS
T ss_pred HHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEE-eCCCCChhH
Confidence 9987421 3568999999999999999988753 56899987 566654443
No 121
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.80 E-value=0.00014 Score=69.91 Aligned_cols=110 Identities=10% Similarity=-0.011 Sum_probs=80.0
Q ss_pred CCCcEEEEeCCCCCCCcch-hhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDI-SVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEIL 174 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~-~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i 174 (246)
.+.|++++.+.-.-...+. ....-+.+.+.+.|+.|+.+|.|.-+.. .+.++.++.++.+.+.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~---------------~r~~~ldDYv~~i~~Al 278 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKA---------------HREWGLSTYVDALKEAV 278 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChh---------------hcCCCHHHHHHHHHHHH
Confidence 3578888886432111110 0012455667788999999999973322 24577888888888888
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHH----HHHHCCC-ceeEEEEecCccc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAW----FRLKYPH-AALGALASSAPIL 222 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~----~~~~yP~-~v~g~v~ssapv~ 222 (246)
+.+++..+ ..++.++|+|+||.+++. ++.++|+ .|+.+++..+|+-
T Consensus 279 d~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 279 DAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred HHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 88887763 456999999999999987 8889996 7999998888886
No 122
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.80 E-value=0.00014 Score=67.23 Aligned_cols=120 Identities=16% Similarity=0.080 Sum_probs=56.6
Q ss_pred CcEE-EEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCC--CCCCchhhhcc------cc----ccCC----
Q 025941 98 APIF-VYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSI--PFGSRKEALKN------AS----TLGY---- 160 (246)
Q Consensus 98 ~pI~-l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~--p~~~~~~~~~~------~~----~l~~---- 160 (246)
-||+ |-||..+.-..+-. +..++|. +|+.|+++|||..-... ...+......+ .+ .++.
T Consensus 100 ~PvvIFSHGlgg~R~~yS~---~~~eLAS-~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSA---ICGELAS-HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp EEEEEEE--TT--TTTTHH---HHHHHHH-TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCEEEEeCCCCcchhhHHH---HHHHHHh-CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 3555 55788777666543 5667774 79999999999742221 10110000000 00 0000
Q ss_pred ----CC---HHHHHHHHHHHHHHHHHHcC--------------------CCCCCEEEEecChHHHHHHHHHHHCCCceeE
Q 025941 161 ----FN---SAQAITDYAEILLYIKEKYN--------------------ARHSPVIVIGGSYGGMLAAWFRLKYPHAALG 213 (246)
Q Consensus 161 ----lt---~~q~l~D~a~~i~~l~~~~~--------------------~~~~pvil~G~S~GG~laa~~~~~yP~~v~g 213 (246)
+. .++-++|+..+++.+++... .+-.++.++|||+||+.++..+.+. ..++.
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~ 254 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKA 254 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--E
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcce
Confidence 01 12345666666666643110 1123699999999999999988887 45677
Q ss_pred EEEecCccc
Q 025941 214 ALASSAPIL 222 (246)
Q Consensus 214 ~v~ssapv~ 222 (246)
+|+.-+.+.
T Consensus 255 ~I~LD~W~~ 263 (379)
T PF03403_consen 255 GILLDPWMF 263 (379)
T ss_dssp EEEES---T
T ss_pred EEEeCCccc
Confidence 776665443
No 123
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.80 E-value=0.00033 Score=60.61 Aligned_cols=113 Identities=15% Similarity=0.117 Sum_probs=72.7
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc-ccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY-YGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg-yG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+-||++|+-.|-.... .-+.+-..+.|+.|+++|.=+ .|.+...........+. ...-.+..+.+.|+...+++
T Consensus 28 P~VIv~hei~Gl~~~i----~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~a~~~~ 102 (236)
T COG0412 28 PGVIVLHEIFGLNPHI----RDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG-LVERVDPAEVLADIDAALDY 102 (236)
T ss_pred CEEEEEecccCCchHH----HHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh-hhccCCHHHHHHHHHHHHHH
Confidence 4477777655433211 122333346799999999855 34554433211111110 01123347899999999999
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEE
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALA 216 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ 216 (246)
++.+...+..++.++|.||||.++..++.+.| .++++++
T Consensus 103 L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~ 141 (236)
T COG0412 103 LARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVA 141 (236)
T ss_pred HHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEE
Confidence 98765445678999999999999999999998 5666665
No 124
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.79 E-value=0.00029 Score=58.82 Aligned_cols=108 Identities=16% Similarity=0.105 Sum_probs=71.5
Q ss_pred CcEEEEeCCCCCCCcchh-hhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDIS-VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~-~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+-.+++|.-+-..+...+ ...-+.....+.|+.++=++.||-|+|...-+. . ---++|.+..+++
T Consensus 29 ~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--------G------iGE~~Da~aaldW 94 (210)
T COG2945 29 PIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--------G------IGELEDAAAALDW 94 (210)
T ss_pred ceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--------C------cchHHHHHHHHHH
Confidence 344566654433322211 112334556688999999999999999752110 0 1124799999999
Q ss_pred HHHHcCCCCCCE-EEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 177 IKEKYNARHSPV-IVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 177 l~~~~~~~~~pv-il~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
++.+. ++.+. .+.|.|+|+.+++..+.+.|+. ...+..++|+-
T Consensus 95 ~~~~h--p~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~ 138 (210)
T COG2945 95 LQARH--PDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPIN 138 (210)
T ss_pred HHhhC--CCchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCC
Confidence 99876 44555 6889999999999999999886 34444455554
No 125
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.76 E-value=0.00016 Score=64.15 Aligned_cols=47 Identities=30% Similarity=0.351 Sum_probs=41.4
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
+.+.+..+++.+.+++.++|.|+||+.+..+..+|||.+.+++..++
T Consensus 256 i~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 256 ILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 34467788899999999999999999999999999999999997653
No 126
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.71 E-value=5.4e-05 Score=65.27 Aligned_cols=100 Identities=18% Similarity=0.136 Sum_probs=56.5
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
..-+|.++-.+|++..|.. |-.++-. -..++.++++|.|.-... ..++ |+..+.+.
T Consensus 7 ~~~L~cfP~AGGsa~~fr~---W~~~lp~--~iel~avqlPGR~~r~~e-------------p~~~------di~~Lad~ 62 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRS---WSRRLPA--DIELLAVQLPGRGDRFGE-------------PLLT------DIESLADE 62 (244)
T ss_pred CceEEEecCCCCCHHHHHH---HHhhCCc--hhheeeecCCCcccccCC-------------cccc------cHHHHHHH
Confidence 3456677655555544332 2222211 237899999998865321 1111 22223333
Q ss_pred HHHHcC--CCCCCEEEEecChHHHHHHHHHHHCC---CceeEEEEe--cCc
Q 025941 177 IKEKYN--ARHSPVIVIGGSYGGMLAAWFRLKYP---HAALGALAS--SAP 220 (246)
Q Consensus 177 l~~~~~--~~~~pvil~G~S~GG~laa~~~~~yP---~~v~g~v~s--sap 220 (246)
+...+. ..+.|+.++||||||++|-.++.++- ....+.++| .||
T Consensus 63 la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 63 LANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred HHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 333322 35679999999999999988876532 225556654 466
No 127
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.68 E-value=0.00032 Score=58.67 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=49.2
Q ss_pred EEEEeCCCCCCCcchhhhHHHHHHHHHcCC--eEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 100 IFVYLGAEESLDGDISVIGFLTDNAARFNA--LLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 100 I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~--~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
|+.+||..++...... ..+.+..++.+. .+..++.+ ...+++++.+...++..
T Consensus 2 ilYlHGF~Ssp~S~Ka--~~l~~~~~~~~~~~~~~~p~l~-----------------------~~p~~a~~~l~~~i~~~ 56 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKA--QALKQYFAEHGPDIQYPCPDLP-----------------------PFPEEAIAQLEQLIEEL 56 (187)
T ss_pred eEEecCCCCCCCCHHH--HHHHHHHHHhCCCceEECCCCC-----------------------cCHHHHHHHHHHHHHhC
Confidence 6788998887766442 344454444432 23333322 12345555555554443
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHA 210 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~ 210 (246)
. +..+.++|.|+||..|.+++.+|+-.
T Consensus 57 ~------~~~~~liGSSlGG~~A~~La~~~~~~ 83 (187)
T PF05728_consen 57 K------PENVVLIGSSLGGFYATYLAERYGLP 83 (187)
T ss_pred C------CCCeEEEEEChHHHHHHHHHHHhCCC
Confidence 2 22399999999999999999999643
No 128
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.66 E-value=0.0006 Score=59.66 Aligned_cols=48 Identities=21% Similarity=0.400 Sum_probs=40.3
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC
Q 025941 179 EKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFDD 226 (246)
Q Consensus 179 ~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~~ 226 (246)
+.+..+..+-.++||||||.+++....++|+.+...++.|+-++..++
T Consensus 130 ~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~ 177 (264)
T COG2819 130 ARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNE 177 (264)
T ss_pred cccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCH
Confidence 445556677999999999999999999999999999988877765543
No 129
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.66 E-value=0.00042 Score=60.71 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=63.5
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
-||+++.+|......++ ..++..+| .+||.||.+|....+.- ....-+++++++++++
T Consensus 17 yPVv~f~~G~~~~~s~Y--s~ll~hvA-ShGyIVV~~d~~~~~~~-------------------~~~~~~~~~~~vi~Wl 74 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWY--SQLLEHVA-SHGYIVVAPDLYSIGGP-------------------DDTDEVASAAEVIDWL 74 (259)
T ss_pred cCEEEEeCCcCCCHHHH--HHHHHHHH-hCceEEEEecccccCCC-------------------CcchhHHHHHHHHHHH
Confidence 47776665555443332 33555554 68999999996542221 1112344555666665
Q ss_pred HHHcC--------CCCCCEEEEecChHHHHHHHHHHHC-----CCceeEEEEec
Q 025941 178 KEKYN--------ARHSPVIVIGGSYGGMLAAWFRLKY-----PHAALGALASS 218 (246)
Q Consensus 178 ~~~~~--------~~~~pvil~G~S~GG~laa~~~~~y-----P~~v~g~v~ss 218 (246)
.+.+. .+-.++.+.|||-||-+|..++..+ +..+.++++..
T Consensus 75 ~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lD 128 (259)
T PF12740_consen 75 AKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLD 128 (259)
T ss_pred HhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEec
Confidence 54321 2345899999999999999988887 56788888765
No 130
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.00018 Score=60.84 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=70.1
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
.+..||+|||.+........ --+...|.+.||.|..+ |||.+.. --+.+|.+.|+.+.++.
T Consensus 67 ~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasv---gY~l~~q---------------~htL~qt~~~~~~gv~f 127 (270)
T KOG4627|consen 67 AKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASV---GYNLCPQ---------------VHTLEQTMTQFTHGVNF 127 (270)
T ss_pred ccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEe---ccCcCcc---------------cccHHHHHHHHHHHHHH
Confidence 34556778998876653321 12345677889999998 5555531 13578999999998888
Q ss_pred HHHHcCCCCCCEEEEecChHHHHHHHHHHH-CCCceeEEEEecCc
Q 025941 177 IKEKYNARHSPVIVIGGSYGGMLAAWFRLK-YPHAALGALASSAP 220 (246)
Q Consensus 177 l~~~~~~~~~pvil~G~S~GG~laa~~~~~-yP~~v~g~v~ssap 220 (246)
+.+.+.. .+.+.+-|||.|+.||+....+ +-..|+|++++++.
T Consensus 128 ilk~~~n-~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~Gv 171 (270)
T KOG4627|consen 128 ILKYTEN-TKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGV 171 (270)
T ss_pred HHHhccc-ceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhH
Confidence 8776532 2346677899999999775433 33457888876654
No 131
>PLN02209 serine carboxypeptidase
Probab=97.64 E-value=0.0016 Score=61.43 Aligned_cols=84 Identities=18% Similarity=0.208 Sum_probs=54.1
Q ss_pred CCeEEEEccc-cccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHH---
Q 025941 128 NALLVYIEHR-YYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYN-ARHSPVIVIGGSYGGMLAAW--- 202 (246)
Q Consensus 128 g~~vv~~d~R-gyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~-~~~~pvil~G~S~GG~laa~--- 202 (246)
.+.++++|++ |.|-|....+ ..+.+.++.++|+..+++.+-+..+ ..+.|++++|.||||.-+..
T Consensus 117 ~anllfiDqPvGtGfSy~~~~----------~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~ 186 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKTP----------IERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVH 186 (437)
T ss_pred cCcEEEecCCCCCCccCCCCC----------CCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHH
Confidence 4689999965 8888853211 1123344566899888888766654 24569999999999974443
Q ss_pred -HHHHC-----C-CceeEEEEecCcc
Q 025941 203 -FRLKY-----P-HAALGALASSAPI 221 (246)
Q Consensus 203 -~~~~y-----P-~~v~g~v~ssapv 221 (246)
+.... | =.++|+++.++.+
T Consensus 187 ~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 187 EISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred HHHhhcccccCCceeeeeEEecCccc
Confidence 33322 1 2457777666543
No 132
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.63 E-value=0.00093 Score=62.87 Aligned_cols=84 Identities=17% Similarity=0.211 Sum_probs=53.2
Q ss_pred CCeEEEEccc-cccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHHHHH
Q 025941 128 NALLVYIEHR-YYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNA-RHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 128 g~~vv~~d~R-gyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~-~~~pvil~G~S~GG~laa~~~~ 205 (246)
.+.|+++|++ |.|-|....+ ..+.+.++.++|+..+++.+-+..+. .+.|++++|.||||..+..++.
T Consensus 115 ~anllfiDqPvGtGfSy~~~~----------~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTP----------IDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred cCcEEEecCCCCCCccCCCCC----------CCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHH
Confidence 3699999955 8898863211 11222234448888888876655543 5679999999999975544432
Q ss_pred ----HC------CCceeEEEEecCcc
Q 025941 206 ----KY------PHAALGALASSAPI 221 (246)
Q Consensus 206 ----~y------P~~v~g~v~ssapv 221 (246)
.. +=.++|+++..+.+
T Consensus 185 ~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 185 EISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHhhcccccCCcccceeeEecCCCc
Confidence 22 22567777666543
No 133
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.56 E-value=0.00044 Score=58.97 Aligned_cols=63 Identities=21% Similarity=0.204 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH---C----CC-----ceeEEEEecCcccccC
Q 025941 163 SAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK---Y----PH-----AALGALASSAPILYFD 225 (246)
Q Consensus 163 ~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~---y----P~-----~v~g~v~ssapv~~~~ 225 (246)
++...+.+++-|....+.......|++++||||||.++-.+... . |+ .....+..++|.+-..
T Consensus 55 I~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~ 129 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSR 129 (217)
T ss_pred hHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCc
Confidence 34444444443433333333233689999999999999766542 2 21 2334455678876443
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.53 E-value=0.00015 Score=66.53 Aligned_cols=99 Identities=17% Similarity=0.140 Sum_probs=55.1
Q ss_pred HHHHHHcCCeEEEEccccccCCCCCCCchh-------hh-ccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe
Q 025941 121 TDNAARFNALLVYIEHRYYGKSIPFGSRKE-------AL-KNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIG 192 (246)
Q Consensus 121 ~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~-------~~-~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G 192 (246)
.+...+.||.|+++|.+++|+..+-..... .+ .+.-.++.--.-...-|....++.+...-..++.++-++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 344557899999999999998764321100 00 0000111100112233444466666655555778999999
Q ss_pred cChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 193 GSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 193 ~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+||||..+.+++..-+. |+++++++..
T Consensus 233 fSmGg~~a~~LaALDdR-Ika~v~~~~l 259 (390)
T PF12715_consen 233 FSMGGYRAWWLAALDDR-IKATVANGYL 259 (390)
T ss_dssp EGGGHHHHHHHHHH-TT---EEEEES-B
T ss_pred ecccHHHHHHHHHcchh-hHhHhhhhhh
Confidence 99999999999998755 5666665543
No 135
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.51 E-value=0.00046 Score=61.08 Aligned_cols=107 Identities=19% Similarity=0.137 Sum_probs=68.2
Q ss_pred CCcEEEEeCCCCCCCc-chh--hhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDG-DIS--VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~-~~~--~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
+.+|+=||--+-+... |.. +..-+.++.+++ .++=+|.+|+..--+.- ++...|.|.++..+++..+
T Consensus 23 kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f--~i~Hi~aPGqe~ga~~~--------p~~y~yPsmd~LAe~l~~V 92 (283)
T PF03096_consen 23 KPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNF--CIYHIDAPGQEEGAATL--------PEGYQYPSMDQLAEMLPEV 92 (283)
T ss_dssp S-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTS--EEEEEE-TTTSTT-------------TT-----HHHHHCTHHHH
T ss_pred CceEEEeccccccchHHHHHHhcchhHHHHhhce--EEEEEeCCCCCCCcccc--------cccccccCHHHHHHHHHHH
Confidence 4456667754444332 221 123455666655 99999999997654321 2456788999999999999
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
+++++-+. +|-+|-..|+.+-+.|+.+||+.|.|+|+.+.
T Consensus 93 l~~f~lk~------vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~ 132 (283)
T PF03096_consen 93 LDHFGLKS------VIGFGVGAGANILARFALKHPERVLGLILVNP 132 (283)
T ss_dssp HHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-
T ss_pred HHhCCccE------EEEEeeccchhhhhhccccCccceeEEEEEec
Confidence 99987644 99999999999999999999999999998764
No 136
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.49 E-value=0.0008 Score=63.80 Aligned_cols=116 Identities=17% Similarity=0.129 Sum_probs=67.3
Q ss_pred CCcEEEE-eCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc--ccC-CCCCCCchhhhccccccCCCCHHHHHHHHHH
Q 025941 97 NAPIFVY-LGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY--YGK-SIPFGSRKEALKNASTLGYFNSAQAITDYAE 172 (246)
Q Consensus 97 ~~pI~l~-~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg--yG~-S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~ 172 (246)
+-||+++ |||....+.-....-....++.+.+..||.+.+|= +|- +.+... . + ..-..+.|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~------~-~-----~gN~Gl~Dq~~ 191 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLD------A-P-----SGNYGLLDQRL 191 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTT------S-H-----BSTHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccc------c-C-----chhhhhhhhHH
Confidence 3576655 56554433321011122355667789999999992 231 111000 0 0 12367889999
Q ss_pred HHHHHHHHcC---CCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCccccc
Q 025941 173 ILLYIKEKYN---ARHSPVIVIGGSYGGMLAAWFRLK--YPHAALGALASSAPILYF 224 (246)
Q Consensus 173 ~i~~l~~~~~---~~~~pvil~G~S~GG~laa~~~~~--yP~~v~g~v~ssapv~~~ 224 (246)
.+++++++.. -+..+|.|+|||-||+.+...... -..+++++|+.|+.....
T Consensus 192 AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~~ 248 (535)
T PF00135_consen 192 ALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALSP 248 (535)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTST
T ss_pred HHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccccc
Confidence 9999987753 455689999999999988877665 235899999988855433
No 137
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.47 E-value=0.0003 Score=63.89 Aligned_cols=108 Identities=10% Similarity=0.077 Sum_probs=61.2
Q ss_pred CCcEEEEeCCCCCC-CcchhhhHHHHHHHHH--cCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESL-DGDISVIGFLTDNAAR--FNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~-~~~~~~~g~~~~~a~~--~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
+..+|++||..++. ...+. ......+.++ -+++|+++|....-.. . ...+. .+....-+.++.+
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~-~~~~~all~~~~~d~NVI~VDWs~~a~~-~---Y~~a~--------~n~~~vg~~la~~ 137 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWI-QDMIKALLQKDTGDYNVIVVDWSRGASN-N---YPQAV--------ANTRLVGRQLAKF 137 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHH-HHHHHHHHCC--S-EEEEEEE-HHHHSS-----HHHHH--------HHHHHHHHHHHHH
T ss_pred CCeEEEEcCcCCcccchhHH-HHHHHHHHhhccCCceEEEEcchhhccc-c---ccchh--------hhHHHHHHHHHHH
Confidence 45677888988877 33222 1223333344 4789999999743221 0 00000 1123344556777
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEe
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH--AALGALAS 217 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~--~v~g~v~s 217 (246)
|..+.+..+.+-.++.++|||+|+.+|-........ .+..+.+.
T Consensus 138 l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgL 183 (331)
T PF00151_consen 138 LSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGL 183 (331)
T ss_dssp HHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEE
T ss_pred HHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEec
Confidence 777776555566789999999999999999988777 56555554
No 138
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.46 E-value=0.0022 Score=60.00 Aligned_cols=51 Identities=24% Similarity=0.372 Sum_probs=40.2
Q ss_pred HHHHHHHHHcC--CCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 172 EILLYIKEKYN--ARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 172 ~~i~~l~~~~~--~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
+++-.+.+++. .+..+.++.|+||||..|++++.+||+.+.++++.|+-+.
T Consensus 272 eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~w 324 (411)
T PRK10439 272 ELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFW 324 (411)
T ss_pred HHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEecccee
Confidence 44455555554 2445789999999999999999999999999998887653
No 139
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.43 E-value=0.00064 Score=62.65 Aligned_cols=113 Identities=21% Similarity=0.232 Sum_probs=69.0
Q ss_pred CCCcEEEE-eCCCCCCCcchhhhHHHHHH------------------HHHcCCeEEEEccc-cccCCCCCCCchhhhccc
Q 025941 96 ANAPIFVY-LGAEESLDGDISVIGFLTDN------------------AARFNALLVYIEHR-YYGKSIPFGSRKEALKNA 155 (246)
Q Consensus 96 ~~~pI~l~-~Gg~~~~~~~~~~~g~~~~~------------------a~~~g~~vv~~d~R-gyG~S~p~~~~~~~~~~~ 155 (246)
...|++|. .||+|.++-+. ++.++ .-...+.|+++|++ |.|-|....
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g----~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~--------- 104 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWG----LFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGND--------- 104 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHH----HHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESS---------
T ss_pred CCccEEEEecCCceeccccc----cccccCceEEeecccccccccccccccccceEEEeecCceEEeeccc---------
Confidence 34566655 59999876431 22211 11224799999966 899987532
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHHHH----HHC------CCceeEEEEecCcc
Q 025941 156 STLGYFNSAQAITDYAEILLYIKEKYNA-RHSPVIVIGGSYGGMLAAWFR----LKY------PHAALGALASSAPI 221 (246)
Q Consensus 156 ~~l~~lt~~q~l~D~a~~i~~l~~~~~~-~~~pvil~G~S~GG~laa~~~----~~y------P~~v~g~v~ssapv 221 (246)
......+.+++.+|+..+++.+-.+++. .+.|++|+|.||||..+..++ ... +=.++|+++.++-+
T Consensus 105 ~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 105 PSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp GGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred cccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 1113457799999999999988777653 456999999999998665444 333 33478887766544
No 140
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.41 E-value=0.0032 Score=58.31 Aligned_cols=55 Identities=29% Similarity=0.314 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHcCCC--CCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 167 ITDYAEILLYIKEKYNAR--HSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 167 l~D~a~~i~~l~~~~~~~--~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
+-|+...+.++++.+... +.|+|++|+|+||.||...+.-.|..+++++=-|+.+
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 346666677777766533 3599999999999999999999999999999555433
No 141
>PRK04940 hypothetical protein; Provisional
Probab=97.36 E-value=0.0025 Score=52.96 Aligned_cols=109 Identities=12% Similarity=0.188 Sum_probs=60.8
Q ss_pred EEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHH
Q 025941 100 IFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKE 179 (246)
Q Consensus 100 I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~ 179 (246)
|+++||..++..... ..++... .+.+|.|.+ +.|. ...+++++-+...+..+..
T Consensus 2 IlYlHGF~SS~~S~~-------~Ka~~l~--~~~p~~~~~--~l~~---------------~~P~~a~~~l~~~i~~~~~ 55 (180)
T PRK04940 2 IIYLHGFDSTSPGNH-------EKVLQLQ--FIDPDVRLI--SYST---------------LHPKHDMQHLLKEVDKMLQ 55 (180)
T ss_pred EEEeCCCCCCCCccH-------HHHHhhe--eeCCCCeEE--ECCC---------------CCHHHHHHHHHHHHHHhhh
Confidence 678899888776521 1223332 124455554 2220 1234566655555544322
Q ss_pred HcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC----CCCchhhHHHHHH
Q 025941 180 KYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFDD----ITPQNGYYSIVTR 239 (246)
Q Consensus 180 ~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~~----~~~~~~y~~~v~~ 239 (246)
. + ...++.++|.|+||+-|.|++.+|. + .+|+..+-|....+ +.++.+|.++..+
T Consensus 56 ~-~-~~~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~ 114 (180)
T PRK04940 56 L-S-DDERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEENMEGKIDRPEEYADIATK 114 (180)
T ss_pred c-c-CCCCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHHHHHHHhCCCcchhhhhHH
Confidence 1 1 1246899999999999999999985 2 34455665554332 2334446644444
No 142
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.34 E-value=0.0024 Score=56.63 Aligned_cols=107 Identities=16% Similarity=0.110 Sum_probs=77.8
Q ss_pred CCcEEEEeCCCCCCCc-chh--hhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDG-DIS--VIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~-~~~--~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
++.|+=||.-.-+... |.. +..-+.++..+ +.++-+|.+|+=.--|. -++...|-|.|+..+|+..+
T Consensus 46 kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~--------~p~~y~yPsmd~LAd~l~~V 115 (326)
T KOG2931|consen 46 KPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPS--------FPEGYPYPSMDDLADMLPEV 115 (326)
T ss_pred CceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCcc--------CCCCCCCCCHHHHHHHHHHH
Confidence 3446677865544433 222 12234455555 48899999998654432 12456788999999999999
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
++++.-+. +|-+|-.-|+.+-+.|+.++|+.|.|+|+.+.
T Consensus 116 L~~f~lk~------vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~ 155 (326)
T KOG2931|consen 116 LDHFGLKS------VIGMGVGAGAYILARFALNHPERVLGLVLINC 155 (326)
T ss_pred HHhcCcce------EEEecccccHHHHHHHHhcChhheeEEEEEec
Confidence 98886543 89999999999999999999999999998764
No 143
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.30 E-value=0.001 Score=62.76 Aligned_cols=114 Identities=20% Similarity=0.206 Sum_probs=67.5
Q ss_pred CCcEE-EEeCCCCCCCcchh--hhHHHHHHHHHcCCeEEEEcccc--ccC-CCCCCCchhhhccccccCCCCHHHHHHHH
Q 025941 97 NAPIF-VYLGAEESLDGDIS--VIGFLTDNAARFNALLVYIEHRY--YGK-SIPFGSRKEALKNASTLGYFNSAQAITDY 170 (246)
Q Consensus 97 ~~pI~-l~~Gg~~~~~~~~~--~~g~~~~~a~~~g~~vv~~d~Rg--yG~-S~p~~~~~~~~~~~~~l~~lt~~q~l~D~ 170 (246)
+.||+ ++|||.-..+.-.. ..| ..+|++-++.||.++||= +|- ..+ .. +........-.+.|+
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~--~~-------~~~~~~~~n~Gl~Dq 161 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLS--SL-------DTEDAFASNLGLLDQ 161 (491)
T ss_pred CCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehh--hc-------cccccccccccHHHH
Confidence 34655 55676644332111 112 456666668999999992 221 000 00 000111112456787
Q ss_pred HHHHHHHHHHc---CCCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEecCccc
Q 025941 171 AEILLYIKEKY---NARHSPVIVIGGSYGGMLAAWFRLKYPH---AALGALASSAPIL 222 (246)
Q Consensus 171 a~~i~~l~~~~---~~~~~pvil~G~S~GG~laa~~~~~yP~---~v~g~v~ssapv~ 222 (246)
...+++++++. +.+...|.|+|+|-|++.++++... |+ +++.+|+.|++..
T Consensus 162 ilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 162 ILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 77788777654 4566689999999999988887654 54 6777887776654
No 144
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.28 E-value=0.0029 Score=62.55 Aligned_cols=55 Identities=20% Similarity=0.211 Sum_probs=33.1
Q ss_pred CEEEEecChHHHHHHHHHH---HCCCceeEEEEecCcccccCC-C-CCchhhHHHHHHHH
Q 025941 187 PVIVIGGSYGGMLAAWFRL---KYPHAALGALASSAPILYFDD-I-TPQNGYYSIVTRDF 241 (246)
Q Consensus 187 pvil~G~S~GG~laa~~~~---~yP~~v~g~v~ssapv~~~~~-~-~~~~~y~~~v~~~~ 241 (246)
-||++||||||++|..+.. .+++.|.-++--|+|..+.+= + ....+||..|-+.-
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~D~~l~~fy~~vnn~W 242 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPLDRFLLRFYLLVNNYW 242 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCCcHHHHHHHHHHHHHH
Confidence 4999999999999865443 244555555556667654431 1 11346666655443
No 145
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.26 E-value=0.025 Score=53.47 Aligned_cols=111 Identities=21% Similarity=0.242 Sum_probs=68.9
Q ss_pred CCcEEEEe-CCCCCCCcchhhhHHHHHHH-----------------HHcCCeEEEEccc-cccCCCCCCCchhhhccccc
Q 025941 97 NAPIFVYL-GAEESLDGDISVIGFLTDNA-----------------ARFNALLVYIEHR-YYGKSIPFGSRKEALKNAST 157 (246)
Q Consensus 97 ~~pI~l~~-Gg~~~~~~~~~~~g~~~~~a-----------------~~~g~~vv~~d~R-gyG~S~p~~~~~~~~~~~~~ 157 (246)
..|+++-. ||+|+++-. |++.|+. -...+.++++|.+ |.|-|--..+ ..
T Consensus 72 ~dPlvLWLnGGPGCSSl~----G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~--------~~ 139 (454)
T KOG1282|consen 72 TDPLVLWLNGGPGCSSLG----GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTS--------SD 139 (454)
T ss_pred CCCEEEEeCCCCCccchh----hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCC--------Cc
Confidence 35666555 999987642 2333321 1124689999998 7887753211 11
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHH----HHHHHHHHHC-----C-CceeEEEEecCc
Q 025941 158 LGYFNSAQAITDYAEILLYIKEKYN-ARHSPVIVIGGSYGG----MLAAWFRLKY-----P-HAALGALASSAP 220 (246)
Q Consensus 158 l~~lt~~q~l~D~a~~i~~l~~~~~-~~~~pvil~G~S~GG----~laa~~~~~y-----P-~~v~g~v~ssap 220 (246)
.. .+-+...+|.-.|++..-++.+ ..+.++++.|.||+| +||..+.... | -..+|.++..+-
T Consensus 140 ~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 140 YK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGL 212 (454)
T ss_pred Cc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcc
Confidence 11 3446778888777766555543 356789999999999 6666666654 2 245777654443
No 146
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.20 E-value=0.0015 Score=52.24 Aligned_cols=55 Identities=20% Similarity=0.160 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC----ceeEEEEecCccccc
Q 025941 168 TDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH----AALGALASSAPILYF 224 (246)
Q Consensus 168 ~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~----~v~g~v~ssapv~~~ 224 (246)
+++...++....++ ++.+++++|||+||.+|..++..+++ ....++..++|-...
T Consensus 12 ~~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~ 70 (153)
T cd00741 12 NLVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGN 70 (153)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccc
Confidence 44444444444433 45689999999999999998877654 456677767665433
No 147
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.16 E-value=0.0025 Score=55.07 Aligned_cols=95 Identities=8% Similarity=0.030 Sum_probs=59.8
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcC--CeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFN--ALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g--~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
.+..+|++||...+.+.-. .-+.++....+ ..++.+..+..|.-..+.. .--+......+++.+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~---~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-----------d~~~a~~s~~~l~~~ 82 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDAL---RRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-----------DRESARFSGPALARF 82 (233)
T ss_pred CCeEEEEEeCCCCCHHHHH---HHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-----------hhhhHHHHHHHHHHH
Confidence 3466778888776643321 23334444443 3788888887765221110 001445667778888
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK 206 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~ 206 (246)
++.+.+.. ...++.+++||||+.+.......
T Consensus 83 L~~L~~~~--~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 83 LRDLARAP--GIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred HHHHHhcc--CCceEEEEEeCchHHHHHHHHHH
Confidence 88887653 34679999999999999887543
No 148
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.08 E-value=0.0012 Score=61.23 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC------ceeEEEEecCccccc
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH------AALGALASSAPILYF 224 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~------~v~g~v~ssapv~~~ 224 (246)
++...++...|+.+.+.. +.|++|+||||||.++..+....+. .|++.|..++|..-.
T Consensus 100 ~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 455666777777766543 5789999999999999999998864 489999999987533
No 149
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.01 E-value=0.0015 Score=50.96 Aligned_cols=53 Identities=25% Similarity=0.370 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH----CCC--ceeEEEEecCccc
Q 025941 168 TDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK----YPH--AALGALASSAPIL 222 (246)
Q Consensus 168 ~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~----yP~--~v~g~v~ssapv~ 222 (246)
..+..-++.+.+++. +.++++.|||+||++|..++.. .+. ....++..++|-.
T Consensus 48 ~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 48 DQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 344444555555553 4689999999999999887654 221 3345555565544
No 150
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.00 E-value=0.0093 Score=49.92 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=67.0
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIK 178 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~ 178 (246)
-++++-|-.|-.. ...-+.+..++.|+.|+.+|-+-|=-+.. +.+|..+|++.+|++..
T Consensus 4 ~~v~~SGDgGw~~----~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-----------------tP~~~a~Dl~~~i~~y~ 62 (192)
T PF06057_consen 4 LAVFFSGDGGWRD----LDKQIAEALAKQGVPVVGVDSLRYFWSER-----------------TPEQTAADLARIIRHYR 62 (192)
T ss_pred EEEEEeCCCCchh----hhHHHHHHHHHCCCeEEEechHHHHhhhC-----------------CHHHHHHHHHHHHHHHH
Confidence 3556665433221 11234455567899999998765443432 45789999999999988
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHHCCC----ceeEEEEec
Q 025941 179 EKYNARHSPVIVIGGSYGGMLAAWFRLKYPH----AALGALASS 218 (246)
Q Consensus 179 ~~~~~~~~pvil~G~S~GG~laa~~~~~yP~----~v~g~v~ss 218 (246)
++-+ ..+++|+|-|+|+-+.-....+-|. .|..+++.+
T Consensus 63 ~~w~--~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~ 104 (192)
T PF06057_consen 63 ARWG--RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLS 104 (192)
T ss_pred HHhC--CceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEec
Confidence 7763 4679999999999888888877775 455665544
No 151
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.98 E-value=0.0046 Score=50.38 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=47.4
Q ss_pred CCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-
Q 025941 128 NALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK- 206 (246)
Q Consensus 128 g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~- 206 (246)
...|+.+|.+++|.+.+.. .+.+..++++... +.... ...|++++|||+||.++..++.+
T Consensus 25 ~~~v~~~~~~g~~~~~~~~--------------~~~~~~~~~~~~~---l~~~~--~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 25 RRDVSALPLPGFGPGEPLP--------------ASADALVEAQAEA---VLRAA--GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred CccEEEecCCCCCCCCCCC--------------CCHHHHHHHHHHH---HHHhc--CCCCeEEEEECHHHHHHHHHHHHH
Confidence 3589999999998765421 1233433333332 22222 34689999999999999887775
Q ss_pred --CCCceeEEEEecC
Q 025941 207 --YPHAALGALASSA 219 (246)
Q Consensus 207 --yP~~v~g~v~ssa 219 (246)
.++.+.++++..+
T Consensus 86 ~~~~~~~~~l~~~~~ 100 (212)
T smart00824 86 EARGIPPAAVVLLDT 100 (212)
T ss_pred HhCCCCCcEEEEEcc
Confidence 4566777765543
No 152
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.96 E-value=0.0017 Score=55.14 Aligned_cols=56 Identities=21% Similarity=0.317 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccC
Q 025941 169 DYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFD 225 (246)
Q Consensus 169 D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~ 225 (246)
-+.+.+++++++...++.++.++|.|.||-+|+.++.++| .|.++|+.+++...+.
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEec
Confidence 3556677887765555678999999999999999999999 6788888777655444
No 153
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.93 E-value=0.0025 Score=54.36 Aligned_cols=55 Identities=22% Similarity=0.263 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC-----CCceeEEEEecCccc
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKY-----PHAALGALASSAPIL 222 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~y-----P~~v~g~v~ssapv~ 222 (246)
....++...++.+++++ ++.++++.|||+||++|..++... +..+. ++..++|-.
T Consensus 109 ~~~~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~-~~tFg~P~v 168 (229)
T cd00519 109 SLYNQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVT-VYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceE-EEEeCCCCC
Confidence 34455555555555554 567899999999999998876542 33444 444455443
No 154
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.93 E-value=0.0023 Score=59.63 Aligned_cols=120 Identities=15% Similarity=0.021 Sum_probs=84.7
Q ss_pred CCCcEEEEeCCCCCCCcchhhh--HHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCC--CCHHH-HHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVI--GFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGY--FNSAQ-AITDY 170 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~--g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~--lt~~q-~l~D~ 170 (246)
+++||++.||-..++..|..+. .-+.-+..+.||.|..-.-||---|...... ++....++ ++.++ +.-|+
T Consensus 72 ~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l----~~~~~~~FW~FS~~Em~~yDL 147 (403)
T KOG2624|consen 72 KRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL----SPSSDKEFWDFSWHEMGTYDL 147 (403)
T ss_pred CCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc----CCcCCcceeecchhhhhhcCH
Confidence 4578888899998888775431 2344456678999999999996556532221 11111112 35555 77999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEecCcc
Q 025941 171 AEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH---AALGALASSAPI 221 (246)
Q Consensus 171 a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~---~v~g~v~ssapv 221 (246)
.+.|+++.+..+ ..++..+|||-|+.....+....|+ .|+.+++.++++
T Consensus 148 PA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 148 PAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 999999987663 3579999999999999888888776 577787776555
No 155
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.92 E-value=0.0027 Score=57.75 Aligned_cols=102 Identities=17% Similarity=0.100 Sum_probs=62.1
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCe---EEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNAL---LVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~---vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
.-|+++.||..+....+....-++ ...|.. ++.++.++- +... + .....+|..+-
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~--~~~~-~-----------~~~~~~ql~~~---- 116 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRL----AILGWLTNGVYAFELSGG--DGTY-S-----------LAVRGEQLFAY---- 116 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhh----cchHHHhccccccccccc--CCCc-c-----------ccccHHHHHHH----
Confidence 469999999866555544322222 223334 677776643 1110 0 01123343333
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC--CceeEEEEecCccc
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP--HAALGALASSAPIL 222 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP--~~v~g~v~ssapv~ 222 (246)
++.+..+.+ ..++.++||||||.++-++...++ ..|...+..+.|..
T Consensus 117 V~~~l~~~g--a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 117 VDEVLAKTG--AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHhhcC--CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 333333222 357999999999999999999998 78888888887753
No 156
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.87 E-value=0.0044 Score=56.63 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=64.4
Q ss_pred CCcEEEE-eCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc--ccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 97 NAPIFVY-LGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY--YGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 97 ~~pI~l~-~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg--yG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
.-||+++ ||..+....+. ++.+...+.|+.|..+||+| .|....... ......-.-.-+-..|+..+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~----~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~------~~~~~~p~~~~erp~dis~l 139 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFA----WLAEHLASYGFVVAAPDHPGSNAGGAPAAYA------GPGSYAPAEWWERPLDISAL 139 (365)
T ss_pred cCCeEEecCCCCCCccchh----hhHHHHhhCceEEEeccCCCcccccCChhhc------CCcccchhhhhcccccHHHH
Confidence 4577766 56555544432 66777778999999999998 344432110 00010111123445788888
Q ss_pred HHHHHHH-----cC--CCCCCEEEEecChHHHHHHHHHHHCCC
Q 025941 174 LLYIKEK-----YN--ARHSPVIVIGGSYGGMLAAWFRLKYPH 209 (246)
Q Consensus 174 i~~l~~~-----~~--~~~~pvil~G~S~GG~laa~~~~~yP~ 209 (246)
+..+.+. +. .+..||-++|||+||.-++..+--..+
T Consensus 140 Ld~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 140 LDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred HHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 8888766 21 244589999999999999887654433
No 157
>COG0627 Predicted esterase [General function prediction only]
Probab=96.86 E-value=0.0063 Score=54.99 Aligned_cols=124 Identities=17% Similarity=0.126 Sum_probs=67.2
Q ss_pred CCcEEEEeCCCCCCC-cchhhhHHHHHHHHHcCCeEEEE--ccccccCCCCC----CCchhhhccccc----cCCCCHHH
Q 025941 97 NAPIFVYLGAEESLD-GDISVIGFLTDNAARFNALLVYI--EHRYYGKSIPF----GSRKEALKNAST----LGYFNSAQ 165 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~-~~~~~~g~~~~~a~~~g~~vv~~--d~RgyG~S~p~----~~~~~~~~~~~~----l~~lt~~q 165 (246)
.-||+++.+|..... .+.. .+-+.+.+.+.|..+++. +.|+.+.-.+. +...-=+.|... ...+..+.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~-~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYL-LDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCEEEEeCCCCCCCCceEe-ccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 457777665555443 3332 234566777788888884 55666654331 100000001000 00011122
Q ss_pred -HHHHHHHHHHHHHHHcCCCC--CCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025941 166 -AITDYAEILLYIKEKYNARH--SPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYF 224 (246)
Q Consensus 166 -~l~D~a~~i~~l~~~~~~~~--~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~ 224 (246)
.+.++... +.+..+... ....++||||||.=|..++.++|+.+..+...|+.+...
T Consensus 132 fl~~ELP~~---~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPAL---WEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHH---HHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 12233322 222333222 257899999999999999999999998888777665444
No 158
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.85 E-value=0.0041 Score=51.58 Aligned_cols=59 Identities=14% Similarity=0.150 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 163 SAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 163 ~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.+....++..|++-+.... .++.++.++|||||+.++...+...+..++.+|+.++|=.
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 4667788889998887665 4567899999999999999988887778888888777643
No 159
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.77 E-value=0.0062 Score=53.41 Aligned_cols=88 Identities=22% Similarity=0.200 Sum_probs=54.4
Q ss_pred CcEEEE-eCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 98 APIFVY-LGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 98 ~pI~l~-~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
-||+++ ||..-.. .++. .++..+| .+|+.||+++.-. . ..|. ..+-+++.++++++
T Consensus 46 yPVilF~HG~~l~n-s~Ys--~lL~HIA-SHGfIVVAPQl~~-~-~~p~-----------------~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 46 YPVILFLHGFNLYN-SFYS--QLLAHIA-SHGFIVVAPQLYT-L-FPPD-----------------GQDEIKSAASVINW 102 (307)
T ss_pred ccEEEEeechhhhh-HHHH--HHHHHHh-hcCeEEEechhhc-c-cCCC-----------------chHHHHHHHHHHHH
Confidence 466655 5544332 2221 2443343 6899999996532 2 2221 12345677778887
Q ss_pred HHHHcC--------CCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 177 IKEKYN--------ARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 177 l~~~~~--------~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
+.+.+. .+-.++.++|||.||-.|-.+++.|-
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 765532 23358999999999999988888773
No 160
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.75 E-value=0.0038 Score=54.92 Aligned_cols=119 Identities=14% Similarity=0.041 Sum_probs=71.8
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCC---CCCch---hhh--c-cccccCCCCHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIP---FGSRK---EAL--K-NASTLGYFNSAQAI 167 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p---~~~~~---~~~--~-~~~~l~~lt~~q~l 167 (246)
-+.||-+||..+..+.+.. ++ .++ ..|+.|+.+|-||-|.|.- ..... ..+ + ..++...+-.....
T Consensus 83 ~P~vV~fhGY~g~~g~~~~---~l-~wa-~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~ 157 (321)
T COG3458 83 LPAVVQFHGYGGRGGEWHD---ML-HWA-VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVF 157 (321)
T ss_pred cceEEEEeeccCCCCCccc---cc-ccc-ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeeh
Confidence 3568899998887764432 11 222 4689999999999998732 11000 000 0 00000111112344
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 168 TDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 168 ~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
.|....++.+..-...+..++.+.|+|-||.|++..+...|. ++++++.-+-+
T Consensus 158 ~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r-ik~~~~~~Pfl 210 (321)
T COG3458 158 LDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPR-IKAVVADYPFL 210 (321)
T ss_pred HHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChh-hhccccccccc
Confidence 566666666655445567789999999999999999888765 46665544433
No 161
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.55 E-value=0.02 Score=50.00 Aligned_cols=118 Identities=14% Similarity=0.219 Sum_probs=72.1
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHc----CCeEEEEccccccCCCCC-CCchhhhcccc-c----cCCCCHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARF----NALLVYIEHRYYGKSIPF-GSRKEALKNAS-T----LGYFNSAQA 166 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~----g~~vv~~d~RgyG~S~p~-~~~~~~~~~~~-~----l~~lt~~q~ 166 (246)
--|.+++||..|++..... .+.++..+. ...++.+|--| |..+ +..+...+++- . -..-+..+.
T Consensus 45 ~iPTIfIhGsgG~asS~~~---Mv~ql~~~~~~~~e~Lt~~V~~dg---slk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNG---MVNQLLPDYKAGTESLTMTVDVDG---SLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccceEEEecCCCChhHHHH---HHHHhhhcccccccceEEEEcCCC---cEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 3689999999998876432 344444332 34677776655 2211 00000000000 0 001122333
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-----ceeEEEEecCccc
Q 025941 167 ITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH-----AALGALASSAPIL 222 (246)
Q Consensus 167 l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~-----~v~g~v~ssapv~ 222 (246)
-.-+..++.+|+++++.+ ++-++||||||.-...++..|-+ .+...|+..+|..
T Consensus 119 s~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 556777888999999765 48899999999999999987654 2577888888865
No 162
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.55 E-value=0.014 Score=56.93 Aligned_cols=150 Identities=22% Similarity=0.266 Sum_probs=86.4
Q ss_pred eeeEEEeecCC-CCCCCCCCCeEEEEEEEecc---------ccCCCCCCCCCCcEEEEe-CCCCCCCc-chhhhHHHHHH
Q 025941 56 QTFYYNQTLDH-FNYRPESYSTFQQRYVINFK---------YWGGGAGADANAPIFVYL-GAEESLDG-DISVIGFLTDN 123 (246)
Q Consensus 56 ~~~~~~q~lDh-f~~~~~~~~tF~qry~~~~~---------~~~~g~~~~~~~pI~l~~-Gg~~~~~~-~~~~~g~~~~~ 123 (246)
.+.-.+|++-- |+ |. .-+.+|.|+... .|+........+|+++|- |..|..-. .+. ..-+ .+
T Consensus 400 r~~LkqqeV~~g~d--p~--~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs-~~~l-SL 473 (682)
T COG1770 400 RTLLKQQEVPGGFD--PE--DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFS-IARL-SL 473 (682)
T ss_pred EEEEEeccCCCCCC--hh--HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcc-ccee-ee
Confidence 34446777666 66 43 467788887632 233210012346777776 66654332 211 1111 11
Q ss_pred HHHcCCeEEEEcc-ccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHH
Q 025941 124 AARFNALLVYIEH-RYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAW 202 (246)
Q Consensus 124 a~~~g~~vv~~d~-RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~ 202 (246)
. . .+.|+++=| ||=|+ ....- + +.-+.++-.....|+.+..++|.++--.....++++|+|.||+|...
T Consensus 474 l-D-RGfiyAIAHVRGGge-lG~~W----Y---e~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGa 543 (682)
T COG1770 474 L-D-RGFVYAIAHVRGGGE-LGRAW----Y---EDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGA 543 (682)
T ss_pred e-c-CceEEEEEEeecccc-cChHH----H---HhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHH
Confidence 1 1 224555544 55332 21100 0 11122333456678888888887654344557999999999999999
Q ss_pred HHHHCCCceeEEEEecCcc
Q 025941 203 FRLKYPHAALGALASSAPI 221 (246)
Q Consensus 203 ~~~~yP~~v~g~v~ssapv 221 (246)
.+...|+++.|+|+-.+-|
T Consensus 544 v~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 544 VANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred HHhhChhhhhheeecCCcc
Confidence 9999999999999876543
No 163
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.52 E-value=0.026 Score=50.32 Aligned_cols=84 Identities=24% Similarity=0.211 Sum_probs=56.0
Q ss_pred HHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHH
Q 025941 124 AARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNA-RHSPVIVIGGSYGGMLAAW 202 (246)
Q Consensus 124 a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~-~~~pvil~G~S~GG~laa~ 202 (246)
.-+.|+.|++.|+.|.|. |+... .+.-.++-|.....+.+....+. .+.+|.++|+|=||.-+.|
T Consensus 22 ~L~~GyaVv~pDY~Glg~--~y~~~------------~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~ 87 (290)
T PF03583_consen 22 WLARGYAVVAPDYEGLGT--PYLNG------------RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALW 87 (290)
T ss_pred HHHCCCEEEecCCCCCCC--cccCc------------HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHH
Confidence 336799999999999987 54221 12345566655555555443232 3578999999999999888
Q ss_pred HHHH----CCCc---eeEEEEecCcc
Q 025941 203 FRLK----YPHA---ALGALASSAPI 221 (246)
Q Consensus 203 ~~~~----yP~~---v~g~v~ssapv 221 (246)
.+.. -||+ +.|+++.+.|.
T Consensus 88 AA~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 88 AAELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHHHhHHhCcccccceeEEeccCCcc
Confidence 7644 5665 67777655543
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.48 E-value=0.054 Score=49.94 Aligned_cols=106 Identities=19% Similarity=0.221 Sum_probs=58.3
Q ss_pred CcEE-EEeCCCCCCCcchhhhHHHHHHHHHc-CCeEEEEcccccc---CCCCCCCchhhhccccccCCCCHHHHHHHHHH
Q 025941 98 APIF-VYLGAEESLDGDISVIGFLTDNAARF-NALLVYIEHRYYG---KSIPFGSRKEALKNASTLGYFNSAQAITDYAE 172 (246)
Q Consensus 98 ~pI~-l~~Gg~~~~~~~~~~~g~~~~~a~~~-g~~vv~~d~RgyG---~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~ 172 (246)
.||+ ++|||+-..+.......++..+...+ ...++++|+.-.. ...+++ ..+.++.+
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yP------------------tQL~qlv~ 183 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYP------------------TQLRQLVA 183 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCc------------------hHHHHHHH
Confidence 4655 55777666555443333333332221 3467777775332 121111 23344444
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH--CCC---ceeEEEEecCcccc
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK--YPH---AALGALASSAPILY 223 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~--yP~---~v~g~v~ssapv~~ 223 (246)
..+++.+.. ....++++|-|.||.|++-+.+. .++ .-+++|+.|+-+..
T Consensus 184 ~Y~~Lv~~~--G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 184 TYDYLVESE--GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred HHHHHHhcc--CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 445554333 24569999999999999887642 211 23688888876643
No 165
>PLN02454 triacylglycerol lipase
Probab=96.44 E-value=0.013 Score=54.51 Aligned_cols=41 Identities=20% Similarity=0.309 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~ 205 (246)
.+.+++...++.+.+++...+.++++.|||+||+||+..+.
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 45566667777777777543446999999999999998874
No 166
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.39 E-value=0.013 Score=55.54 Aligned_cols=115 Identities=23% Similarity=0.204 Sum_probs=68.2
Q ss_pred CCcEEEE-eCCCCCCCcchhhhHHHHHHHH------------------HcCCeEEEEccc-cccCCCCCCCchhhhcccc
Q 025941 97 NAPIFVY-LGAEESLDGDISVIGFLTDNAA------------------RFNALLVYIEHR-YYGKSIPFGSRKEALKNAS 156 (246)
Q Consensus 97 ~~pI~l~-~Gg~~~~~~~~~~~g~~~~~a~------------------~~g~~vv~~d~R-gyG~S~p~~~~~~~~~~~~ 156 (246)
+.||+|. -||+|+++.+. ++.++.. .-.+.+|++|++ |.|-|....+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g----~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~--------- 166 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTG----LLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGD--------- 166 (498)
T ss_pred CCceEEEecCCCChHhhhh----hhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccccc---------
Confidence 4666655 59999987653 3322211 114689999955 8888864211
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHcC---CCCCCEEEEecChHHHHHHHHHHHCCC---ceeEEEEecCcccccC
Q 025941 157 TLGYFNSAQAITDYAEILLYIKEKYN---ARHSPVIVIGGSYGGMLAAWFRLKYPH---AALGALASSAPILYFD 225 (246)
Q Consensus 157 ~l~~lt~~q~l~D~a~~i~~l~~~~~---~~~~pvil~G~S~GG~laa~~~~~yP~---~v~g~v~ssapv~~~~ 225 (246)
.+--+.+.+-+|+..+.+.+.+.+. ...+|++|+|.||||.-+..++..--+ ...+.+..++.+....
T Consensus 167 -e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 167 -EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred -ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 1112344555677766666655442 223589999999999988777654222 3455555555444333
No 167
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.39 E-value=0.006 Score=51.93 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=68.1
Q ss_pred CCcEEEEe-CCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccC-CCCH--HHHHH---H
Q 025941 97 NAPIFVYL-GAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLG-YFNS--AQAIT---D 169 (246)
Q Consensus 97 ~~pI~l~~-Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~-~lt~--~q~l~---D 169 (246)
.-|++++. |.....+++....| +...|.++|..||.+|----|-.....+ +++.-....+ |++. |-... -
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg-~qq~As~hgl~vV~PDTSPRG~~v~g~~--eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSG-FQQQASKHGLAVVAPDTSPRGVEVAGDD--ESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred cCceEEEecCCcccchhhHhhhh-HHHhHhhcCeEEECCCCCCCccccCCCc--ccccccCCceeEEecccchHhhhhhH
Confidence 36888887 55555556555444 4567888999999997533232111000 0000000000 1111 11111 1
Q ss_pred HHHHHHHHHHHc-----CCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC
Q 025941 170 YAEILLYIKEKY-----NARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFDD 226 (246)
Q Consensus 170 ~a~~i~~l~~~~-----~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~~ 226 (246)
+..+.+.+-+.+ ..+..++-++||||||.=|+...+|.|...+.+-+ -|||+...+
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSA-FAPI~NP~~ 180 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSA-FAPICNPIN 180 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceec-cccccCccc
Confidence 112233333222 23556799999999999999999999997665543 467765443
No 168
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.36 E-value=0.11 Score=46.89 Aligned_cols=134 Identities=13% Similarity=0.106 Sum_probs=77.1
Q ss_pred EEEEeccccCCCCCCCCCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc-ccCCCCCCCch---------
Q 025941 80 RYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY-YGKSIPFGSRK--------- 149 (246)
Q Consensus 80 ry~~~~~~~~~g~~~~~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg-yG~S~p~~~~~--------- 149 (246)
++..-.+-|.. ++..|-||++||...+..+ ....+.+.+-..+.|-..+.+..+. .+...|.....
T Consensus 73 ~flaL~~~~~~---~~~~G~vIilp~~g~~~d~-p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~ 148 (310)
T PF12048_consen 73 RFLALWRPANS---AKPQGAVIILPDWGEHPDW-PGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGD 148 (310)
T ss_pred EEEEEEecccC---CCCceEEEEecCCCCCCCc-HhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCC
Confidence 45544444444 4567889999987777764 3345677777788999999998876 11111110000
Q ss_pred hhhcccccc----------CCC-CHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-ceeEEEEe
Q 025941 150 EALKNASTL----------GYF-NSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH-AALGALAS 217 (246)
Q Consensus 150 ~~~~~~~~l----------~~l-t~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~-~v~g~v~s 217 (246)
...+...+. .+. ..++..+-+...+..++.+ ...+++|+||+.|+.+++.+....+. .++++|+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I 225 (310)
T PF12048_consen 149 QQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLI 225 (310)
T ss_pred CCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEE
Confidence 000000000 000 0122333344444444332 23349999999999999999988775 47888887
Q ss_pred cCc
Q 025941 218 SAP 220 (246)
Q Consensus 218 sap 220 (246)
++-
T Consensus 226 ~a~ 228 (310)
T PF12048_consen 226 NAY 228 (310)
T ss_pred eCC
Confidence 764
No 169
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.31 E-value=0.0032 Score=59.01 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--------ceeEEEEecCccccc
Q 025941 163 SAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH--------AALGALASSAPILYF 224 (246)
Q Consensus 163 ~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~--------~v~g~v~ssapv~~~ 224 (246)
.++.+.+++..|+.+-+.. ...|++|++|||||.+...|...+++ .+++.+..+||.+..
T Consensus 161 rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG~ 228 (473)
T KOG2369|consen 161 RDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLGS 228 (473)
T ss_pred HHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcCC
Confidence 3677888888888877665 34789999999999999999999988 356666677776533
No 170
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.30 E-value=0.0088 Score=57.69 Aligned_cols=86 Identities=16% Similarity=0.017 Sum_probs=65.6
Q ss_pred HHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHH
Q 025941 123 NAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAW 202 (246)
Q Consensus 123 ~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~ 202 (246)
.....||.||..|.||-|.|...-.. +.. |-++|-.+.|+++.++ .-.+.+|-.+|-||+|+...+
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~------------~~~-~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~ 140 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDP------------ESS-REAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLA 140 (563)
T ss_pred eeecCceEEEEecccccccCCcccce------------ecc-ccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHH
Confidence 34467999999999999999863221 112 4567888889998773 345678999999999999999
Q ss_pred HHHHCCCceeEEEEecCccc
Q 025941 203 FRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 203 ~~~~yP~~v~g~v~ssapv~ 222 (246)
.+...|...++++..++..-
T Consensus 141 ~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 141 AAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred HHhcCCchheeecccccccc
Confidence 99888887787776555543
No 171
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=96.16 E-value=0.062 Score=44.05 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=64.2
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc-----ccCCCCCCCchhhhccccccCCCCHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY-----YGKSIPFGSRKEALKNASTLGYFNSAQAITDYAE 172 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg-----yG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~ 172 (246)
..|++-||..++.+.... . .........|..|.=+|.+| +|.-.|.+ ..+.++-+. ..
T Consensus 15 ~tilLaHGAGasmdSt~m-~-~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~----------~~~t~~~~~-----~~ 77 (213)
T COG3571 15 VTILLAHGAGASMDSTSM-T-AVAAALARRGWLVARFEFPYMAARRTGRRKPPP----------GSGTLNPEY-----IV 77 (213)
T ss_pred EEEEEecCCCCCCCCHHH-H-HHHHHHHhCceeEEEeecchhhhccccCCCCcC----------ccccCCHHH-----HH
Confidence 457777888887765321 1 12222234688888888776 34333321 112222222 22
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccc
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILY 223 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~ 223 (246)
.+..+...+ ...|.|+=|+||||-++...+..---.|++++..+=|+..
T Consensus 78 ~~aql~~~l--~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp 126 (213)
T COG3571 78 AIAQLRAGL--AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP 126 (213)
T ss_pred HHHHHHhcc--cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC
Confidence 233444433 4568999999999999999876544458899888877643
No 172
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.07 E-value=0.017 Score=49.71 Aligned_cols=51 Identities=24% Similarity=0.252 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC----CceeEEEEecCccc
Q 025941 169 DYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP----HAALGALASSAPIL 222 (246)
Q Consensus 169 D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP----~~v~g~v~ssapv~ 222 (246)
....+++.+.+++ +.++++.|||.||.+|...+...+ +.+..++..-+|=+
T Consensus 70 ~A~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 70 SALAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3445555655554 236999999999999999988744 46778887666644
No 173
>PLN02310 triacylglycerol lipase
Probab=96.06 E-value=0.016 Score=53.98 Aligned_cols=57 Identities=21% Similarity=0.355 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH----HCCCceeEEEEecCccc
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL----KYPHAALGALASSAPIL 222 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~----~yP~~v~g~v~ssapv~ 222 (246)
+|.++.+..+++..+.+ .++.++++.|||+||+||+..+. ..|..-..++..++|-.
T Consensus 189 ~qVl~eV~~L~~~y~~~--~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGK--GEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHhhccc--CCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 45555554444433211 23457999999999999988773 34554345666677744
No 174
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.06 E-value=0.023 Score=51.10 Aligned_cols=40 Identities=25% Similarity=0.180 Sum_probs=28.8
Q ss_pred CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025941 184 RHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYF 224 (246)
Q Consensus 184 ~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~ 224 (246)
+.++++++|||+||+.++......- .++.+|+.-+-++..
T Consensus 239 ~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~Pl 278 (399)
T KOG3847|consen 239 DTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMFPL 278 (399)
T ss_pred hhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeeccc
Confidence 3457899999999999988777654 456777666654433
No 175
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.98 E-value=0.026 Score=50.96 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=54.0
Q ss_pred CeEEEEccc-cccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHH-
Q 025941 129 ALLVYIEHR-YYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYN-ARHSPVIVIGGSYGGMLAAWFRL- 205 (246)
Q Consensus 129 ~~vv~~d~R-gyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~-~~~~pvil~G~S~GG~laa~~~~- 205 (246)
+.|+++|+| |.|-|-...+ ..+.+.++.++|+..+++.+-++++ ..+.|+++.|.||||.-+-.++.
T Consensus 2 aNvLfiDqPvGvGfSy~~~~----------~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTP----------IDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred ccEEEecCCCCCCCCCCCCC----------CCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 479999999 8888863211 1122333444899888888776664 36789999999999975544433
Q ss_pred ---HC-----C-CceeEEEEecCcc
Q 025941 206 ---KY-----P-HAALGALASSAPI 221 (246)
Q Consensus 206 ---~y-----P-~~v~g~v~ssapv 221 (246)
.. | =.++|+++..+.+
T Consensus 72 I~~~n~~~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 72 ISQGNYICCEPPINLQGYMLGNPVT 96 (319)
T ss_pred HHhhcccccCCceeeeEEEeCCCCC
Confidence 22 1 1466777655443
No 176
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.97 E-value=0.037 Score=50.53 Aligned_cols=95 Identities=9% Similarity=0.076 Sum_probs=57.1
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCC--eEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNA--LLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~--~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
.+..++|+||....-+.-. --..++....|+ ..|.+-.+.-|+-..+ +..--++++...+++.+
T Consensus 115 ~k~vlvFvHGfNntf~dav---~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Y-----------n~DreS~~~Sr~aLe~~ 180 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAV---YRTAQIVHDSGNDGVPVVFSWPSRGSLLGY-----------NYDRESTNYSRPALERL 180 (377)
T ss_pred CCeEEEEEcccCCchhHHH---HHHHHHHhhcCCCcceEEEEcCCCCeeeec-----------ccchhhhhhhHHHHHHH
Confidence 3456778888654332211 123344444443 3444444443332211 11112567888999999
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK 206 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~ 206 (246)
|+.+.++.+ ..++.+++||||..+++....+
T Consensus 181 lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 181 LRYLATDKP--VKRIYLLAHSMGTWLLMEALRQ 211 (377)
T ss_pred HHHHHhCCC--CceEEEEEecchHHHHHHHHHH
Confidence 999988764 3569999999999999887653
No 177
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.95 E-value=0.087 Score=45.88 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=59.3
Q ss_pred cEEEEeCCCCCCCcchhhhH-HHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCC-HHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIG-FLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFN-SAQAITDYAEILLY 176 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g-~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt-~~q~l~D~a~~i~~ 176 (246)
-||-+.||..-...-..... ++..++ +.|+.|++.=+.. ...+.. ..++...+...++.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La-~~Gy~ViAtPy~~------------------tfDH~~~A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLA-DRGYAVIATPYVV------------------TFDHQAIAREVWERFERCLRA 78 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHH-hCCcEEEEEecCC------------------CCcHHHHHHHHHHHHHHHHHH
Confidence 35555677654432222223 444555 5699999974321 112222 23344455555555
Q ss_pred HHHHcCC--CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025941 177 IKEKYNA--RHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASS 218 (246)
Q Consensus 177 l~~~~~~--~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ss 218 (246)
+.+.... ...|++-+|||+|.-+-+.+...++..-.|-++.|
T Consensus 79 L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 79 LQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred HHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 5554322 23589999999999999999988876656655544
No 178
>PLN02571 triacylglycerol lipase
Probab=95.93 E-value=0.033 Score=51.94 Aligned_cols=39 Identities=23% Similarity=0.385 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK 206 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~ 206 (246)
+|.++++. .+.+++..++.++++.|||+||+||+..+..
T Consensus 208 ~qvl~eV~----~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVG----RLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHH----HHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44445544 4444444334579999999999999987753
No 179
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=95.86 E-value=0.019 Score=47.33 Aligned_cols=38 Identities=24% Similarity=0.373 Sum_probs=32.9
Q ss_pred CCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 185 HSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 185 ~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
+.|+++++||.|...++.++...-..|.|+++.++|-.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCc
Confidence 46799999999999999998877779999999887754
No 180
>PLN02606 palmitoyl-protein thioesterase
Probab=95.79 E-value=0.35 Score=43.43 Aligned_cols=108 Identities=14% Similarity=0.069 Sum_probs=68.1
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHc-CCeEEEEccccccCCCCCCCchhhhccccccCC-CCHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARF-NALLVYIEHRYYGKSIPFGSRKEALKNASTLGY-FNSAQAITDYAEILL 175 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~-g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~-lt~~q~l~D~a~~i~ 175 (246)
-|||+.||-..+.... ..+.+.+++.+. +.-+..++ -|-|.. -.+ .+..+.++.+.+-++
T Consensus 27 ~PvViwHGlgD~~~~~--~~~~~~~~i~~~~~~pg~~v~-ig~~~~---------------~s~~~~~~~Qv~~vce~l~ 88 (306)
T PLN02606 27 VPFVLFHGFGGECSNG--KVSNLTQFLINHSGYPGTCVE-IGNGVQ---------------DSLFMPLRQQASIACEKIK 88 (306)
T ss_pred CCEEEECCCCcccCCc--hHHHHHHHHHhCCCCCeEEEE-ECCCcc---------------cccccCHHHHHHHHHHHHh
Confidence 6999999987554432 234555666433 55555554 221110 012 234444555555555
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecCcccccCCC
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH--AALGALASSAPILYFDDI 227 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~--~v~g~v~ssapv~~~~~~ 227 (246)
...+.. ++ +.++|+|=||.++--+.+++|+ .|+-.|..++|..-.-++
T Consensus 89 ~~~~L~--~G--~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~ 138 (306)
T PLN02606 89 QMKELS--EG--YNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAI 138 (306)
T ss_pred cchhhc--Cc--eEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccC
Confidence 533321 22 8999999999999999999998 499999999998665554
No 181
>PLN02162 triacylglycerol lipase
Probab=95.75 E-value=0.03 Score=52.81 Aligned_cols=39 Identities=28% Similarity=0.330 Sum_probs=27.3
Q ss_pred CCCCEEEEecChHHHHHHHHHH---HC-----CCceeEEEEecCccc
Q 025941 184 RHSPVIVIGGSYGGMLAAWFRL---KY-----PHAALGALASSAPIL 222 (246)
Q Consensus 184 ~~~pvil~G~S~GG~laa~~~~---~y-----P~~v~g~v~ssapv~ 222 (246)
++.++++.|||+||++|+.++. .. .+.+.+++..++|=.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 4568999999999999988743 11 123456677777754
No 182
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.65 E-value=0.026 Score=53.85 Aligned_cols=56 Identities=20% Similarity=0.388 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH----HCCCc-eeEEEEecCcc
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL----KYPHA-ALGALASSAPI 221 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~----~yP~~-v~g~v~ssapv 221 (246)
+|.++++..+++..++. .++.++++.|||+||+||+..+. ..|+. -..++..++|-
T Consensus 298 eQVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPR 358 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPR 358 (525)
T ss_pred HHHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCC
Confidence 56667766665544321 13457999999999999988774 35553 23345555663
No 183
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.62 E-value=0.21 Score=44.91 Aligned_cols=109 Identities=14% Similarity=0.106 Sum_probs=70.4
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHc-CCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARF-NALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~-g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
.-|+++.||-+.+.... ..+-+.+++.+. |.-+..++. |.+. .. .- ..+..+.++.+.+-++
T Consensus 25 ~~P~ViwHG~GD~c~~~--g~~~~~~l~~~~~g~~~~~i~i---g~~~-~~---------s~--~~~~~~Qve~vce~l~ 87 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDA--TNANFTQLLTNLSGSPGFCLEI---GNGV-GD---------SW--LMPLTQQAEIACEKVK 87 (314)
T ss_pred CCCeEEecCCCcccCCc--hHHHHHHHHHhCCCCceEEEEE---CCCc-cc---------cc--eeCHHHHHHHHHHHHh
Confidence 47999999988776653 234556666543 556666643 4331 00 01 1234445555555555
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecCcccccCC
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH--AALGALASSAPILYFDD 226 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~--~v~g~v~ssapv~~~~~ 226 (246)
...+ +. +. +.++|+|=||.++--+.++.|+ .|+..|..++|..-.-+
T Consensus 88 ~~~~-l~-~G--~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g 136 (314)
T PLN02633 88 QMKE-LS-QG--YNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISS 136 (314)
T ss_pred hchh-hh-Cc--EEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeC
Confidence 5333 21 23 8999999999999999999998 49999998988754444
No 184
>PLN02324 triacylglycerol lipase
Probab=95.56 E-value=0.047 Score=50.92 Aligned_cols=37 Identities=16% Similarity=0.208 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025941 169 DYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 169 D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~ 205 (246)
.+..-++.+.+++..++..+++.|||+||+||+..+.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3344445555556444457999999999999988774
No 185
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=95.53 E-value=0.14 Score=47.89 Aligned_cols=105 Identities=9% Similarity=-0.016 Sum_probs=66.7
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
.||+++-..-+..... ..+....+ -. |+.|+.+|.+.-+... ...+.++.++.++-+.++++++
T Consensus 103 ~pvLiV~Pl~g~~~~L--~RS~V~~L-l~-g~dVYl~DW~~p~~vp------------~~~~~f~ldDYi~~l~~~i~~~ 166 (406)
T TIGR01849 103 PAVLIVAPMSGHYATL--LRSTVEAL-LP-DHDVYITDWVNARMVP------------LSAGKFDLEDYIDYLIEFIRFL 166 (406)
T ss_pred CcEEEEcCCchHHHHH--HHHHHHHH-hC-CCcEEEEeCCCCCCCc------------hhcCCCCHHHHHHHHHHHHHHh
Confidence 5777776654332211 22333333 34 8899999998644331 1235577777775445555444
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHC-----CCceeEEEEecCcccccC
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKY-----PHAALGALASSAPILYFD 225 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~y-----P~~v~g~v~ssapv~~~~ 225 (246)
+ .++.++|.++||.+++.+.... |+.++.+++..+|+-...
T Consensus 167 ----G---~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 167 ----G---PDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred ----C---CCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 2 2389999999999976555443 777999999999986443
No 186
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.53 E-value=0.018 Score=55.82 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC---------------CceeEEEEecCccc
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP---------------HAALGALASSAPIL 222 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP---------------~~v~g~v~ssapv~ 222 (246)
++....+...|+.+.+.. .+.||+|+||||||.++..|...-. +.|+..|..++|.+
T Consensus 193 d~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 193 DQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred hHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 455566777777765543 2468999999999999999876432 24677888888864
No 187
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.47 E-value=0.21 Score=43.65 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=60.1
Q ss_pred CCcEEEEe-CCCCCCCcchhhhHHHHHHHHHcC--CeEEEEccccccCCCCCCCchhhhcccc---ccCCCCHHHHHHHH
Q 025941 97 NAPIFVYL-GAEESLDGDISVIGFLTDNAARFN--ALLVYIEHRYYGKSIPFGSRKEALKNAS---TLGYFNSAQAITDY 170 (246)
Q Consensus 97 ~~pI~l~~-Gg~~~~~~~~~~~g~~~~~a~~~g--~~vv~~d~RgyG~S~p~~~~~~~~~~~~---~l~~lt~~q~l~D~ 170 (246)
..++|+.. |++|...-|.. +...+-+..+ ..+..+-|-+|-.-. .+ +++.+ +...++.+..++--
T Consensus 28 ~~~li~~IpGNPG~~gFY~~---F~~~L~~~l~~r~~~wtIsh~~H~~~P--~s----l~~~~s~~~~eifsL~~QV~HK 98 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTE---FARHLHLNLIDRLPVWTISHAGHALMP--AS----LREDHSHTNEEIFSLQDQVDHK 98 (301)
T ss_pred CceEEEEecCCCCchhHHHH---HHHHHHHhcccccceeEEeccccccCC--cc----cccccccccccccchhhHHHHH
Confidence 45666555 99998876554 3333333333 247778787775432 11 11111 22334443333332
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-CCC-ceeEEEEe
Q 025941 171 AEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK-YPH-AALGALAS 217 (246)
Q Consensus 171 a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~-yP~-~v~g~v~s 217 (246)
+..+++ +...+.+++++|||-|+.+.+.+... -++ .|..++..
T Consensus 99 ---laFik~-~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 99 ---LAFIKE-YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL 143 (301)
T ss_pred ---HHHHHH-hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEe
Confidence 333333 34467799999999999999888763 222 45555543
No 188
>PLN00413 triacylglycerol lipase
Probab=95.47 E-value=0.048 Score=51.61 Aligned_cols=48 Identities=27% Similarity=0.252 Sum_probs=31.4
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH----C----CCceeEEEEecCccc
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK----Y----PHAALGALASSAPIL 222 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~----y----P~~v~g~v~ssapv~ 222 (246)
.++.+.+++ ++.++++.|||+||++|+.++.. . .+.+.+++..++|-.
T Consensus 273 ~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 273 HLKEIFDQN--PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHC--CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 344444444 46789999999999999988741 1 223445666666654
No 189
>COG3150 Predicted esterase [General function prediction only]
Probab=95.42 E-value=0.063 Score=44.11 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=51.2
Q ss_pred EEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHH
Q 025941 100 IFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKE 179 (246)
Q Consensus 100 I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~ 179 (246)
|+.+||..++..+... .+..++ +.-|.|..+-|.|-.. -...|+++.+..+|....
T Consensus 2 ilYlHGFnSSP~shka------~l~~q~----~~~~~~~i~y~~p~l~-------------h~p~~a~~ele~~i~~~~- 57 (191)
T COG3150 2 ILYLHGFNSSPGSHKA------VLLLQF----IDEDVRDIEYSTPHLP-------------HDPQQALKELEKAVQELG- 57 (191)
T ss_pred eEEEecCCCCcccHHH------HHHHHH----HhccccceeeecCCCC-------------CCHHHHHHHHHHHHHHcC-
Confidence 6788998886655332 222222 4456777777876432 134577777666655433
Q ss_pred HcCCCCCCEEEEecChHHHHHHHHHHHC
Q 025941 180 KYNARHSPVIVIGGSYGGMLAAWFRLKY 207 (246)
Q Consensus 180 ~~~~~~~pvil~G~S~GG~laa~~~~~y 207 (246)
.+ ...++|-|.||..|.|+..++
T Consensus 58 ---~~--~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 58 ---DE--SPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred ---CC--CceEEeecchHHHHHHHHHHh
Confidence 22 267889999999999999886
No 190
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.41 E-value=0.03 Score=48.09 Aligned_cols=107 Identities=17% Similarity=0.086 Sum_probs=70.0
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
..-++|+||-++.-........+.....+.+..+|.+-.|. .+ ..++..+..+..+|+..+++++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S----sy-----------~G~Gt~slk~D~edl~~l~~Hi 100 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS----SY-----------NGYGTFSLKDDVEDLKCLLEHI 100 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc----cc-----------cccccccccccHHHHHHHHHHh
Confidence 45678888888765433222344445556777888887762 21 1234455677888999999977
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHH--HCCCceeEEEEecCccc
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRL--KYPHAALGALASSAPIL 222 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~--~yP~~v~g~v~ssapv~ 222 (246)
...- ....|+++|||-|-.-...+.. ..|..++++|+ -|||-
T Consensus 101 ~~~~--fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIl-qApVS 144 (299)
T KOG4840|consen 101 QLCG--FSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAIL-QAPVS 144 (299)
T ss_pred hccC--cccceEEEecCccchHHHHHHHhccchHHHHHHHH-hCccc
Confidence 6432 2347999999999988887772 35566777775 45653
No 191
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=95.40 E-value=0.062 Score=50.10 Aligned_cols=110 Identities=15% Similarity=0.013 Sum_probs=76.7
Q ss_pred CCCcEEEEeCCCCCCCcch-hhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHH-HHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDI-SVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAI-TDYAEI 173 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~-~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l-~D~a~~ 173 (246)
-+.|+++++..-.--.-+. ....-+..++-+.|..|+.++.|+=.++. +-.+.++.+ +++.+.
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~---------------~~~~~edYi~e~l~~a 170 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASL---------------AAKNLEDYILEGLSEA 170 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhh---------------hhccHHHHHHHHHHHH
Confidence 3578888887443211110 00123445666789999999998633332 234556666 788888
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCc-eeEEEEecCccc
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHA-ALGALASSAPIL 222 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~-v~g~v~ssapv~ 222 (246)
++.+++..+. ..+.++|++.||++++.+...+|.. |+.+.+..+|+-
T Consensus 171 id~v~~itg~--~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 171 IDTVKDITGQ--KDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHHHhCc--cccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 8888876643 4599999999999999999999987 888888777764
No 192
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.30 E-value=0.092 Score=46.57 Aligned_cols=115 Identities=14% Similarity=0.140 Sum_probs=54.7
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHc--CCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARF--NALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEIL 174 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~--g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i 174 (246)
..||++.||...++.... ..+.+.++.++. |.-|..++. | .+.. ++.++-=+.+....++.++..+
T Consensus 5 ~~PvViwHGmGD~~~~~~-~m~~i~~~i~~~~PG~yV~si~i-g--~~~~--------~D~~~s~f~~v~~Qv~~vc~~l 72 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPS-SMGSIKELIEEQHPGTYVHSIEI-G--NDPS--------EDVENSFFGNVNDQVEQVCEQL 72 (279)
T ss_dssp S--EEEE--TT--S--TT-THHHHHHHHHHHSTT--EEE--S-S--SSHH--------HHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCccccCChh-HHHHHHHHHHHhCCCceEEEEEE-C--CCcc--------hhhhhhHHHHHHHHHHHHHHHH
Confidence 479999999876553211 123455555443 444555443 1 1100 0000000123344445555544
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-ceeEEEEecCcccccCCC
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH-AALGALASSAPILYFDDI 227 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~-~v~g~v~ssapv~~~~~~ 227 (246)
+...+ +. + =+.++|+|=||.+.-.+.+++|+ .|+-.|..++|..-.-++
T Consensus 73 ~~~p~-L~-~--G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~ 122 (279)
T PF02089_consen 73 ANDPE-LA-N--GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGL 122 (279)
T ss_dssp HH-GG-GT-T---EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-
T ss_pred hhChh-hh-c--ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccC
Confidence 44322 21 2 38999999999999999999986 699999999998655544
No 193
>PLN02408 phospholipase A1
Probab=95.24 E-value=0.04 Score=50.64 Aligned_cols=53 Identities=17% Similarity=0.285 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH----CCCc-eeEEEEecCccc
Q 025941 170 YAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK----YPHA-ALGALASSAPIL 222 (246)
Q Consensus 170 ~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~----yP~~-v~g~v~ssapv~ 222 (246)
+.+-++.+.+++..+..++++.|||+||+||...+.. .+.. ...++..++|-.
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRV 241 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRV 241 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCc
Confidence 3344445555554344569999999999999887643 3321 233555566643
No 194
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.00 E-value=0.42 Score=40.94 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=61.3
Q ss_pred CCCcEEEEeCCCCC-CCcchh------------hhHHHHHHHHHcCCeEEEEccc----cccCCCCCCCchhhhcccccc
Q 025941 96 ANAPIFVYLGAEES-LDGDIS------------VIGFLTDNAARFNALLVYIEHR----YYGKSIPFGSRKEALKNASTL 158 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~-~~~~~~------------~~g~~~~~a~~~g~~vv~~d~R----gyG~S~p~~~~~~~~~~~~~l 158 (246)
++..++++||.+-- ++.|.. ...+ .+-|.+.|+.|+.+..- +|- +.. ..+
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPy-i~rAv~~Gygviv~N~N~~~kfye-~k~-----------np~ 166 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPY-IKRAVAEGYGVIVLNPNRERKFYE-KKR-----------NPQ 166 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChH-HHHHHHcCCcEEEeCCchhhhhhh-ccc-----------Ccc
Confidence 45678888985432 222221 1122 34577789999988543 321 211 123
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCC--ceeEEEEecCcc
Q 025941 159 GYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH--AALGALASSAPI 221 (246)
Q Consensus 159 ~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~--~v~g~v~ssapv 221 (246)
.|.++ -++....+-+.+.... ....++++.|||||.+.+.+..++|+ .|.++.+.-+|+
T Consensus 167 kyirt--~veh~~yvw~~~v~pa--~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 167 KYIRT--PVEHAKYVWKNIVLPA--KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred hhccc--hHHHHHHHHHHHhccc--CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 33332 1222333333333222 23459999999999999999999996 455555555554
No 195
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.00 E-value=0.54 Score=45.12 Aligned_cols=111 Identities=15% Similarity=0.118 Sum_probs=73.0
Q ss_pred CCCCcEEEEeCCCC---CCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHH
Q 025941 95 DANAPIFVYLGAEE---SLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYA 171 (246)
Q Consensus 95 ~~~~pI~l~~Gg~~---~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a 171 (246)
..+.|++++-.-.| .+..|.... -...|-+.|.-|+++-.. ..|.+ ..|.+..+.-.+
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~dS--evG~AL~~GHPvYFV~F~----p~P~p-------------gQTl~DV~~ae~ 126 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPDS--EVGVALRAGHPVYFVGFF----PEPEP-------------GQTLEDVMRAEA 126 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCccc--HHHHHHHcCCCeEEEEec----CCCCC-------------CCcHHHHHHHHH
Confidence 35688888863222 233343311 122344557788777443 22211 124555555566
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccC
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFD 225 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~ 225 (246)
.|++.+.+.... ..|.+++|-.-||..++.++..+|+.+--+|+-+||+-+-.
T Consensus 127 ~Fv~~V~~~hp~-~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 127 AFVEEVAERHPD-APKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred HHHHHHHHhCCC-CCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 777777765532 22889999999999999999999999999999999997666
No 196
>PLN02934 triacylglycerol lipase
Probab=94.90 E-value=0.089 Score=50.22 Aligned_cols=52 Identities=23% Similarity=0.271 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH----C----CCceeEEEEecCcccc
Q 025941 170 YAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK----Y----PHAALGALASSAPILY 223 (246)
Q Consensus 170 ~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~----y----P~~v~g~v~ssapv~~ 223 (246)
+...++.+.+++ ++.++++.|||+||++|+.++.. . .+....++..++|-..
T Consensus 307 v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVG 366 (515)
T PLN02934 307 VRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIG 366 (515)
T ss_pred HHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCcc
Confidence 334445555554 56789999999999999988631 1 1223456666777543
No 197
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.85 E-value=0.083 Score=44.89 Aligned_cols=58 Identities=24% Similarity=0.308 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHC----C--CceeEEEEecCccc
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKY----P--HAALGALASSAPIL 222 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~y----P--~~v~g~v~ssapv~ 222 (246)
+-+-.|+....++..++.+ ++.|+||.|||=|+++...+...+ | +...++.+.+.+|-
T Consensus 74 ~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~rLVAAYliG~~v~ 137 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKRLVAAYLIGYPVT 137 (207)
T ss_pred HhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHHhcCchHHhhhheeeecCcccc
Confidence 4566788776666666654 457999999999999999988765 2 23445555555554
No 198
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.71 E-value=0.071 Score=51.27 Aligned_cols=117 Identities=21% Similarity=0.141 Sum_probs=64.4
Q ss_pred CcE-EEEeCCCCCCCcchh-hhHHHHHHHHHcCCeEEEEcccc--ccC-CCCCCCchhhhccccccCCCCHHHHHHHHHH
Q 025941 98 API-FVYLGAEESLDGDIS-VIGFLTDNAARFNALLVYIEHRY--YGK-SIPFGSRKEALKNASTLGYFNSAQAITDYAE 172 (246)
Q Consensus 98 ~pI-~l~~Gg~~~~~~~~~-~~g~~~~~a~~~g~~vv~~d~Rg--yG~-S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~ 172 (246)
-|| +++|||+-..+.... ........+...+..||.+.+|= .|- |.. +. ....+++ +.|...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~-----~~~gN~g-------l~Dq~~ 178 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DS-----AAPGNLG-------LFDQLL 178 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-CC-----CCCCccc-------HHHHHH
Confidence 464 455777644333110 01112233444556788888882 231 111 00 0113333 346666
Q ss_pred HHHHHHHHc---CCCCCCEEEEecChHHHHHHHHHHH--CCCceeEEEEecCcccccCCC
Q 025941 173 ILLYIKEKY---NARHSPVIVIGGSYGGMLAAWFRLK--YPHAALGALASSAPILYFDDI 227 (246)
Q Consensus 173 ~i~~l~~~~---~~~~~pvil~G~S~GG~laa~~~~~--yP~~v~g~v~ssapv~~~~~~ 227 (246)
.+++++++. +.+..+|.++|||.||+.+..+... ..+++..+|..|+..+....+
T Consensus 179 AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~~~~~ 238 (545)
T KOG1516|consen 179 ALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALSPWAI 238 (545)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccccchhc
Confidence 666666543 4466789999999999998776542 225777888777665544433
No 199
>PLN02761 lipase class 3 family protein
Probab=94.55 E-value=0.075 Score=50.85 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcC----CCCCCEEEEecChHHHHHHHHHH
Q 025941 168 TDYAEILLYIKEKYN----ARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 168 ~D~a~~i~~l~~~~~----~~~~pvil~G~S~GG~laa~~~~ 205 (246)
+++...|+.+.+.+. .++.++++.|||+||+||...+.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 344444555555552 24467999999999999988774
No 200
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=94.53 E-value=0.18 Score=42.59 Aligned_cols=117 Identities=15% Similarity=0.059 Sum_probs=51.6
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCC-CCCch---h--hhccccccCCC---------
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIP-FGSRK---E--ALKNASTLGYF--------- 161 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p-~~~~~---~--~~~~~~~l~~l--------- 161 (246)
+.-|+.+||...+...+....+-+.+...+.++..+++|-+.--...+ ..+.. . ...+.....++
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 456899999999988876655555554444456899988775331110 00000 0 00011112222
Q ss_pred -CHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEecChHHHHHHHHHHHC--------CCceeEEEEecCcc
Q 025941 162 -NSAQAITDYAEILLYIKEKYNARHSP-VIVIGGSYGGMLAAWFRLKY--------PHAALGALASSAPI 221 (246)
Q Consensus 162 -t~~q~l~D~a~~i~~l~~~~~~~~~p-vil~G~S~GG~laa~~~~~y--------P~~v~g~v~ssapv 221 (246)
..+++++.+..+++ ++ .| .-++|.|-||++|+.+.... ...++-+|+.|+..
T Consensus 84 ~~~~~sl~~l~~~i~---~~-----GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 84 EGLDESLDYLRDYIE---EN-----GPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp ---HHHHHHHHHHHH---HH--------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred cCHHHHHHHHHHHHH---hc-----CCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 23344444333333 22 23 35899999999999887532 12356777666544
No 201
>PLN02802 triacylglycerol lipase
Probab=94.53 E-value=0.07 Score=50.87 Aligned_cols=52 Identities=23% Similarity=0.278 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH----HCCCc-eeEEEEecCcc
Q 025941 170 YAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL----KYPHA-ALGALASSAPI 221 (246)
Q Consensus 170 ~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~----~yP~~-v~g~v~ssapv 221 (246)
+..-++.+.+++..++..+++.|||+||+||...+. ..++. ...++..++|-
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPR 370 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPR 370 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCC
Confidence 333344454555434457999999999999987654 33432 12355556664
No 202
>PLN02753 triacylglycerol lipase
Probab=94.14 E-value=0.13 Score=49.27 Aligned_cols=37 Identities=22% Similarity=0.210 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHcCC---CCCCEEEEecChHHHHHHHHHH
Q 025941 169 DYAEILLYIKEKYNA---RHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 169 D~a~~i~~l~~~~~~---~~~pvil~G~S~GG~laa~~~~ 205 (246)
++...++.+.+++.. ++.++++.|||+||+||+..+.
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 333444445454432 3568999999999999988874
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.08 E-value=0.68 Score=38.26 Aligned_cols=59 Identities=10% Similarity=0.094 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH------CCCceeEEEEecCcccc
Q 025941 163 SAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK------YPHAALGALASSAPILY 223 (246)
Q Consensus 163 ~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~------yP~~v~g~v~ssapv~~ 223 (246)
..+..+++...|+....+- ++.+++|+|.|-|++++..+... ..+.|.++++.+-|...
T Consensus 60 ~~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 60 VAAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 4567778887777766653 46789999999999999998766 34578999998888763
No 204
>PLN02719 triacylglycerol lipase
Probab=93.80 E-value=0.13 Score=49.13 Aligned_cols=38 Identities=24% Similarity=0.314 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcCC---CCCCEEEEecChHHHHHHHHHH
Q 025941 168 TDYAEILLYIKEKYNA---RHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 168 ~D~a~~i~~l~~~~~~---~~~pvil~G~S~GG~laa~~~~ 205 (246)
+++...++.+.+++.. +..++++.|||+||+||+..+.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3344445556555532 3457999999999999988764
No 205
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=93.68 E-value=0.049 Score=53.01 Aligned_cols=82 Identities=20% Similarity=0.203 Sum_probs=59.0
Q ss_pred cCCeEEEEcccccc---CCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHH
Q 025941 127 FNALLVYIEHRYYG---KSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWF 203 (246)
Q Consensus 127 ~g~~vv~~d~RgyG---~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~ 203 (246)
.|..+.+.+-||=| +.-..+. +...-.+.++|+..-++++.++---...+.-+.|+|-||.|++..
T Consensus 498 ~G~Vla~a~VRGGGe~G~~WHk~G-----------~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~ 566 (712)
T KOG2237|consen 498 RGWVLAYANVRGGGEYGEQWHKDG-----------RLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGAC 566 (712)
T ss_pred cceEEEEEeeccCcccccchhhcc-----------chhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHH
Confidence 56677777899844 3332111 111223467888888888877644456789999999999999999
Q ss_pred HHHCCCceeEEEEecC
Q 025941 204 RLKYPHAALGALASSA 219 (246)
Q Consensus 204 ~~~yP~~v~g~v~ssa 219 (246)
...+|+++.++|+-.+
T Consensus 567 iN~rPdLF~avia~Vp 582 (712)
T KOG2237|consen 567 INQRPDLFGAVIAKVP 582 (712)
T ss_pred hccCchHhhhhhhcCc
Confidence 9999999998887544
No 206
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.54 E-value=1.7 Score=38.46 Aligned_cols=111 Identities=15% Similarity=0.100 Sum_probs=67.7
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYI 177 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l 177 (246)
.|+|++||-...+... ....+...+-+.-|..|+++|. |-| .. .--+....+.+.-+.+.++..
T Consensus 24 ~P~ii~HGigd~c~~~-~~~~~~q~l~~~~g~~v~~lei-g~g--~~------------~s~l~pl~~Qv~~~ce~v~~m 87 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSL-SMANLTQLLEELPGSPVYCLEI-GDG--IK------------DSSLMPLWEQVDVACEKVKQM 87 (296)
T ss_pred CCEEEEeccCcccccc-hHHHHHHHHHhCCCCeeEEEEe-cCC--cc------------hhhhccHHHHHHHHHHHHhcc
Confidence 7999999988777652 1122222233345778888876 333 10 001122333333334444433
Q ss_pred HHHcCCCCCCEEEEecChHHHHHHHHHHHCCC-ceeEEEEecCcccccCCCC
Q 025941 178 KEKYNARHSPVIVIGGSYGGMLAAWFRLKYPH-AALGALASSAPILYFDDIT 228 (246)
Q Consensus 178 ~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~-~v~g~v~ssapv~~~~~~~ 228 (246)
++.. + =..++|-|-||.++-.+.+..|+ -|+..|..++|.-...++.
T Consensus 88 ~~ls--q--Gynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p 135 (296)
T KOG2541|consen 88 PELS--Q--GYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIP 135 (296)
T ss_pred hhcc--C--ceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCC
Confidence 3322 2 38999999999999999888775 5788998888876655553
No 207
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.44 E-value=0.38 Score=39.88 Aligned_cols=35 Identities=34% Similarity=0.358 Sum_probs=31.9
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 187 PVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 187 pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
..++-|+||||..|+.+..++|+++.++|+.|+.-
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 36788999999999999999999999999988764
No 208
>PLN02847 triacylglycerol lipase
Probab=93.38 E-value=0.19 Score=48.95 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=23.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025941 171 AEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 171 a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~ 205 (246)
...+..+.+++ ++-+++++|||+||++|+.+..
T Consensus 238 ~~~L~kal~~~--PdYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 238 TPCLLKALDEY--PDFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred HHHHHHHHHHC--CCCeEEEeccChHHHHHHHHHH
Confidence 33444444444 4568999999999999988654
No 209
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.23 E-value=0.15 Score=46.47 Aligned_cols=50 Identities=24% Similarity=0.266 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH----CC--CceeEEEEecCc
Q 025941 169 DYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK----YP--HAALGALASSAP 220 (246)
Q Consensus 169 D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~----yP--~~v~g~v~ssap 220 (246)
.+...++.+++.+ ++-.+++.|||+||++|..++.. .+ ..-.+++..+.|
T Consensus 156 ~~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 156 GLDAELRRLIELY--PNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred HHHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 3444455666655 36679999999999999887642 22 233455556666
No 210
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.49 E-value=0.98 Score=42.11 Aligned_cols=69 Identities=16% Similarity=0.349 Sum_probs=50.0
Q ss_pred HHHHHHHcCCeEEEEc-cccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHH
Q 025941 120 LTDNAARFNALLVYIE-HRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGM 198 (246)
Q Consensus 120 ~~~~a~~~g~~vv~~d-~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~ 198 (246)
..+..++.|.-||.+| +|||-.- -|.++..+|+..+|++-..+- ...+++++|-|+|.=
T Consensus 279 v~~~l~~~gvpVvGvdsLRYfW~~------------------rtPe~~a~Dl~r~i~~y~~~w--~~~~~~liGySfGAD 338 (456)
T COG3946 279 VAEALQKQGVPVVGVDSLRYFWSE------------------RTPEQIAADLSRLIRFYARRW--GAKRVLLIGYSFGAD 338 (456)
T ss_pred HHHHHHHCCCceeeeehhhhhhcc------------------CCHHHHHHHHHHHHHHHHHhh--CcceEEEEeecccch
Confidence 3445567899999997 5666532 245789999999999887765 356799999999986
Q ss_pred HHHHHHHHCC
Q 025941 199 LAAWFRLKYP 208 (246)
Q Consensus 199 laa~~~~~yP 208 (246)
+--..-.+-|
T Consensus 339 vlP~~~n~L~ 348 (456)
T COG3946 339 VLPFAYNRLP 348 (456)
T ss_pred hhHHHHHhCC
Confidence 5544444433
No 211
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=92.19 E-value=1.1 Score=37.91 Aligned_cols=38 Identities=34% Similarity=0.385 Sum_probs=32.4
Q ss_pred CCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecC
Q 025941 182 NARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSA 219 (246)
Q Consensus 182 ~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssa 219 (246)
+.+..++++-|-|+||++|+.....||..+.|....++
T Consensus 89 Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 89 GIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred CCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 44556799999999999999999999998888876654
No 212
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.06 E-value=0.3 Score=46.67 Aligned_cols=118 Identities=19% Similarity=0.121 Sum_probs=64.3
Q ss_pred EEEeCCCCCCCcchhhhHH-HHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHH
Q 025941 101 FVYLGAEESLDGDISVIGF-LTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKE 179 (246)
Q Consensus 101 ~l~~Gg~~~~~~~~~~~g~-~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~ 179 (246)
|+..||.|-........+. ....+...|+.++.-|. ||..+.......-+ .|.+.+.-+ .-+++.+...+-+.+.+
T Consensus 31 ~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~-~n~~~~~df-a~ra~h~~~~~aK~l~~ 107 (474)
T PF07519_consen 31 FLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFG-NNPEALLDF-AYRALHETTVVAKALIE 107 (474)
T ss_pred eEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCccccccccc-CCHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 6677766654432211111 02234467899999987 55433220000000 010000000 01233333444444444
Q ss_pred Hc-CCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccc
Q 025941 180 KY-NARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPIL 222 (246)
Q Consensus 180 ~~-~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~ 222 (246)
.+ +.+...-...|+|-||--++..+++||+.++|+|+. ||..
T Consensus 108 ~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAg-aPA~ 150 (474)
T PF07519_consen 108 AFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAG-APAI 150 (474)
T ss_pred HHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeC-CchH
Confidence 43 344556889999999999999999999999999984 5543
No 213
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.79 E-value=0.22 Score=44.41 Aligned_cols=35 Identities=23% Similarity=0.512 Sum_probs=28.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
.+...+++.+ ++.++.+.|||.||++|+.+-.+|.
T Consensus 264 dI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhC--CCceEEEeccccchHHHHHhccccC
Confidence 4455566666 5678999999999999999988874
No 214
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.79 E-value=0.22 Score=44.41 Aligned_cols=35 Identities=23% Similarity=0.512 Sum_probs=28.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
.+...+++.+ ++.++.+.|||.||++|+.+-.+|.
T Consensus 264 dI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhC--CCceEEEeccccchHHHHHhccccC
Confidence 4455566666 5678999999999999999988874
No 215
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=90.93 E-value=0.54 Score=42.03 Aligned_cols=63 Identities=22% Similarity=0.343 Sum_probs=43.2
Q ss_pred HHHHHHHH-HHHHHHHHHcCC--CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCC
Q 025941 164 AQAITDYA-EILLYIKEKYNA--RHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFDD 226 (246)
Q Consensus 164 ~q~l~D~a-~~i~~l~~~~~~--~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~~ 226 (246)
+.....++ +++=.+.+.++. ....-+|.|-|+||.++++.+..||+.+--++..|+-+.....
T Consensus 152 ~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~ 217 (299)
T COG2382 152 EAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPL 217 (299)
T ss_pred HHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCcc
Confidence 33334443 455566666642 2234689999999999999999999998777766765555543
No 216
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=90.47 E-value=0.16 Score=43.67 Aligned_cols=92 Identities=12% Similarity=0.115 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025941 118 GFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGG 197 (246)
Q Consensus 118 g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG 197 (246)
...++..+..|+.|+.+|.- .| .|-...........=++-.+.+.+..|+..++++++.+. +..++=++|..|||
T Consensus 57 r~~Adk~A~~Gy~v~vPD~~-~G--dp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGa 131 (242)
T KOG3043|consen 57 REGADKVALNGYTVLVPDFF-RG--DPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGA 131 (242)
T ss_pred HHHHHHHhcCCcEEEcchhh-cC--CCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecc
Confidence 35556555669999999973 34 221110000000111334456677889999999999544 45689999999999
Q ss_pred HHHHHHHHHCCCceeEEE
Q 025941 198 MLAAWFRLKYPHAALGAL 215 (246)
Q Consensus 198 ~laa~~~~~yP~~v~g~v 215 (246)
.++..+..++|+ +.+++
T Consensus 132 k~vv~~~~~~~~-f~a~v 148 (242)
T KOG3043|consen 132 KVVVTLSAKDPE-FDAGV 148 (242)
T ss_pred eEEEEeeccchh-heeee
Confidence 999999999984 44444
No 217
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.41 E-value=1.2 Score=40.52 Aligned_cols=98 Identities=27% Similarity=0.355 Sum_probs=63.5
Q ss_pred CCcEEEEe-CCCCCCCcchhh---hHHHH--------HHHHHcCCeEEEEccc-cccCCCCCCCchhhhccccccCCC-C
Q 025941 97 NAPIFVYL-GAEESLDGDISV---IGFLT--------DNAARFNALLVYIEHR-YYGKSIPFGSRKEALKNASTLGYF-N 162 (246)
Q Consensus 97 ~~pI~l~~-Gg~~~~~~~~~~---~g~~~--------~~a~~~g~~vv~~d~R-gyG~S~p~~~~~~~~~~~~~l~~l-t 162 (246)
..|.++.. ||+|.+...+.+ .|.+. -+.+ .+.++++|-+ |-|-|--.++ -.|. +
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaGfSyVdg~----------~~Y~~~ 97 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAGFSYVDGS----------SAYTTN 97 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh--hccEEEecCCCcCceeeecCc----------cccccc
Confidence 46766665 888876653321 11110 0122 3578888877 7777753221 1122 4
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecChHHHHHHHHHHH
Q 025941 163 SAQAITDYAEILLYIKEKYN-ARHSPVIVIGGSYGGMLAAWFRLK 206 (246)
Q Consensus 163 ~~q~l~D~a~~i~~l~~~~~-~~~~pvil~G~S~GG~laa~~~~~ 206 (246)
.+|+..|+..+++.+-.... ....|.+++-.||||-+|+.+++.
T Consensus 98 ~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 98 NKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 58899999999887765433 356799999999999999988764
No 218
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=89.43 E-value=0.41 Score=46.55 Aligned_cols=114 Identities=18% Similarity=0.159 Sum_probs=72.3
Q ss_pred CCcEEEEe-CCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 97 NAPIFVYL-GAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 97 ~~pI~l~~-Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
+.|-+++. ||..-+. .....+.+ ..--+.|..-+....||=|+=.|-=. ..+.+ .+-....+|+.++.+
T Consensus 420 ~~pTll~aYGGF~vsl-tP~fs~~~-~~WLerGg~~v~ANIRGGGEfGp~WH-~Aa~k-------~nrq~vfdDf~AVae 489 (648)
T COG1505 420 ENPTLLYAYGGFNISL-TPRFSGSR-KLWLERGGVFVLANIRGGGEFGPEWH-QAGMK-------ENKQNVFDDFIAVAE 489 (648)
T ss_pred CCceEEEecccccccc-CCccchhh-HHHHhcCCeEEEEecccCCccCHHHH-HHHhh-------hcchhhhHHHHHHHH
Confidence 35666665 4433222 12222344 33346688888889999776554100 00111 122456789999999
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
.+.++--....++-+.|+|=||.|..-..-++||++-++|.-. |+
T Consensus 490 dLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ev-Pl 534 (648)
T COG1505 490 DLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEV-PL 534 (648)
T ss_pred HHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeecc-ch
Confidence 9887643234478899999999999999999999987777544 44
No 219
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=88.76 E-value=1.8 Score=39.72 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=30.7
Q ss_pred CCCCEEEEecChHHHHHHHHHHHCC-----CceeEEEEecCcccc
Q 025941 184 RHSPVIVIGGSYGGMLAAWFRLKYP-----HAALGALASSAPILY 223 (246)
Q Consensus 184 ~~~pvil~G~S~GG~laa~~~~~yP-----~~v~g~v~ssapv~~ 223 (246)
.+.|+.++|||+|+-+.....+.-+ ..|+-+++.++|+-.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 5679999999999988866554322 358889999999753
No 220
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=87.63 E-value=4.2 Score=43.08 Aligned_cols=112 Identities=24% Similarity=0.306 Sum_probs=64.0
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHH-HHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYA-EIL 174 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a-~~i 174 (246)
.++|+||+|.-||... .+..+|.+. |-+-||.-.- +..- ...+++++ .+|
T Consensus 2122 e~~~~Ffv~pIEG~tt-------~l~~la~rl-------e~PaYglQ~T-----------~~vP----~dSies~A~~yi 2172 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTT-------ALESLASRL-------EIPAYGLQCT-----------EAVP----LDSIESLAAYYI 2172 (2376)
T ss_pred cCCceEEEeccccchH-------HHHHHHhhc-------CCcchhhhcc-----------ccCC----cchHHHHHHHHH
Confidence 4688999998777654 345556544 5666774321 1111 12345554 456
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcccccCCCCCchhhHHHHHHHHHhhhC
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYFDDITPQNGYYSIVTRDFRVIYT 246 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~~~~~~~~~y~~~v~~~~~~~~~ 246 (246)
+.+++-. +..|.-++|-|||..++-.++..--+.- +.+|++..++- ..|..-.++.||..+|
T Consensus 2173 rqirkvQ--P~GPYrl~GYSyG~~l~f~ma~~Lqe~~-----~~~~lillDGs---pty~~~Y~~~yr~~~~ 2234 (2376)
T KOG1202|consen 2173 RQIRKVQ--PEGPYRLAGYSYGACLAFEMASQLQEQQ-----SPAPLILLDGS---PTYVLAYTQSYRAKLT 2234 (2376)
T ss_pred HHHHhcC--CCCCeeeeccchhHHHHHHHHHHHHhhc-----CCCcEEEecCc---hHHHHHHHHHHHHHcC
Confidence 6666543 4679999999999999988876533221 11223333332 2455555566665543
No 221
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=85.38 E-value=5.7 Score=37.98 Aligned_cols=106 Identities=21% Similarity=0.283 Sum_probs=65.5
Q ss_pred CCCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCe-EEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHH
Q 025941 95 DANAPIFVYLGAEESLDGDISVIGFLTDNAARFNAL-LVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEI 173 (246)
Q Consensus 95 ~~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~-vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~ 173 (246)
+-++|+.+|-.|.=.++.+.. ... .+++|+- ++.-|.|=-|.+-= +-+++.-+-+..+
T Consensus 286 D~KPPL~VYFSGyR~aEGFEg-y~M----Mk~Lg~PfLL~~DpRleGGaFY----------------lGs~eyE~~I~~~ 344 (511)
T TIGR03712 286 DFKPPLNVYFSGYRPAEGFEG-YFM----MKRLGAPFLLIGDPRLEGGAFY----------------LGSDEYEQGIINV 344 (511)
T ss_pred CCCCCeEEeeccCcccCcchh-HHH----HHhcCCCeEEeeccccccceee----------------eCcHHHHHHHHHH
Confidence 457888888755555666542 112 2355654 44458887766542 2233333445556
Q ss_pred HHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-CCCceeEEEEecCcccccC
Q 025941 174 LLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK-YPHAALGALASSAPILYFD 225 (246)
Q Consensus 174 i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~-yP~~v~g~v~ssapv~~~~ 225 (246)
|++..+.++-+..-+|+-|-|||..=|+.+..+ .|+ ||+.+=|+....
T Consensus 345 I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~----AIiVgKPL~NLG 393 (511)
T TIGR03712 345 IQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH----AIIVGKPLVNLG 393 (511)
T ss_pred HHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc----eEEEcCcccchh
Confidence 666666667667789999999999999999776 554 233455654333
No 222
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=85.37 E-value=2.7 Score=41.09 Aligned_cols=107 Identities=16% Similarity=0.189 Sum_probs=60.9
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIK 178 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~ 178 (246)
-|+-+|||+--++....-..++.++|+..|+-|+.+|+-=--+ -||+. -.++..--+..+|+.-
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-aPFPR--------------aleEv~fAYcW~inn~- 461 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-APFPR--------------ALEEVFFAYCWAINNC- 461 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-CCCCc--------------HHHHHHHHHHHHhcCH-
Confidence 4556677776555433333588999999999999999732111 12211 1123333333333322
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHHH---CC-CceeEEEEecCcc
Q 025941 179 EKYNARHSPVIVIGGSYGGMLAAWFRLK---YP-HAALGALASSAPI 221 (246)
Q Consensus 179 ~~~~~~~~pvil~G~S~GG~laa~~~~~---yP-~~v~g~v~ssapv 221 (246)
+.++....++++.|-|.||.|..-.+++ |. ..-+|+++.-.|.
T Consensus 462 allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 462 ALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred HHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 2244456789999999999887655543 22 1235666544443
No 223
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=85.06 E-value=9.6 Score=32.37 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=56.1
Q ss_pred cEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHH
Q 025941 99 PIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIK 178 (246)
Q Consensus 99 pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~ 178 (246)
|++++.|..+....... . ..++=.+.|+.++.+-.+.-.-..|. -....+++. +++.+.
T Consensus 1 plvvl~gW~gA~~~hl~--K-Y~~~Y~~~g~~il~~~~~~~~~~~~~---------------~~~~~~~~~---l~~~l~ 59 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLA--K-YSDLYQDPGFDILLVTSPPADFFWPS---------------KRLAPAADK---LLELLS 59 (240)
T ss_pred CEEEEEeCCCCCHHHHH--H-HHHHHHhcCCeEEEEeCCHHHHeeec---------------cchHHHHHH---HHHHhh
Confidence 68899998866543221 1 12333346888888755432222110 011222222 333333
Q ss_pred HHcCCCCCCEEEEecChHHHHHHHHHH---------HCCC-ceeEEEEecCccc
Q 025941 179 EKYNARHSPVIVIGGSYGGMLAAWFRL---------KYPH-AALGALASSAPIL 222 (246)
Q Consensus 179 ~~~~~~~~pvil~G~S~GG~laa~~~~---------~yP~-~v~g~v~ssapv~ 222 (246)
+....+..++++-..|.||........ ..+- .+.|.|.-|+|-.
T Consensus 60 ~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 60 DSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred hhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 322222238999999998887766543 1111 2899999999964
No 224
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.97 E-value=2.2 Score=37.90 Aligned_cols=100 Identities=15% Similarity=0.200 Sum_probs=58.1
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHH----HHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDY----AEI 173 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~----a~~ 173 (246)
+++-+...+.|+...+... .+.+-..+.|..-+.+|-++||+-.|.... ...+.+ +-|+ ++.
T Consensus 113 ~~KOG~~a~tgdh~y~rr~--~L~~p~~k~~i~tmvle~pfYgqr~p~~q~------~~~Le~------vtDlf~mG~A~ 178 (371)
T KOG1551|consen 113 ADLCLSWALTGDHVYTRRL--VLSKPINKREIATMVLEKPFYGQRVPEEQI------IHMLEY------VTDLFKMGRAT 178 (371)
T ss_pred CCeeEEEeecCCceeEeee--eecCchhhhcchheeeecccccccCCHHHH------HHHHHH------HHHHHHhhHHH
Confidence 5777777777766543221 112212234567788999999999885321 111222 2232 122
Q ss_pred HHHHHHHcC----CCCCCEEEEecChHHHHHHHHHHHCCCce
Q 025941 174 LLYIKEKYN----ARHSPVIVIGGSYGGMLAAWFRLKYPHAA 211 (246)
Q Consensus 174 i~~l~~~~~----~~~~pvil~G~S~GG~laa~~~~~yP~~v 211 (246)
|+.....++ ..-.|.-++|-||||.+|......+|.-|
T Consensus 179 I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pv 220 (371)
T KOG1551|consen 179 IQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPV 220 (371)
T ss_pred HHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCc
Confidence 222222222 12247999999999999999999777654
No 225
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=83.51 E-value=24 Score=31.09 Aligned_cols=103 Identities=9% Similarity=0.024 Sum_probs=53.3
Q ss_pred CCcEEEEeCCCC-CCCcchhhhHHHHHHHHHcCCeEEEEccccc-cCCCCCCCchhhhccccccCCCCHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEE-SLDGDISVIGFLTDNAARFNALLVYIEHRYY-GKSIPFGSRKEALKNASTLGYFNSAQAITDYAEIL 174 (246)
Q Consensus 97 ~~pI~l~~Gg~~-~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rgy-G~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i 174 (246)
+.+.+++..|.+ -...+ .| +++.....|+.|+=+|+-.| |.|+. +..-++.....+|+..++
T Consensus 29 ~~~tiliA~Gf~rrmdh~---ag-LA~YL~~NGFhViRyDsl~HvGlSsG------------~I~eftms~g~~sL~~V~ 92 (294)
T PF02273_consen 29 RNNTILIAPGFARRMDHF---AG-LAEYLSANGFHVIRYDSLNHVGLSSG------------DINEFTMSIGKASLLTVI 92 (294)
T ss_dssp -S-EEEEE-TT-GGGGGG---HH-HHHHHHTTT--EEEE---B-------------------------HHHHHHHHHHHH
T ss_pred cCCeEEEecchhHHHHHH---HH-HHHHHhhCCeEEEeccccccccCCCC------------ChhhcchHHhHHHHHHHH
Confidence 346666664443 33322 23 34455567999999999877 88874 233477888899999999
Q ss_pred HHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 175 LYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 175 ~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
+++++ .+. .++=++.-|..|-+|...+.+ ++ +.-+|...+.
T Consensus 93 dwl~~-~g~--~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGV 133 (294)
T PF02273_consen 93 DWLAT-RGI--RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGV 133 (294)
T ss_dssp HHHHH-TT-----EEEEEETTHHHHHHHHTTT-S---SEEEEES--
T ss_pred HHHHh-cCC--CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeee
Confidence 99984 333 348899999999999999885 44 3334433333
No 226
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.10 E-value=3.7 Score=40.13 Aligned_cols=51 Identities=31% Similarity=0.477 Sum_probs=34.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH-C----CC------ceeEEEEecCccc
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK-Y----PH------AALGALASSAPIL 222 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~-y----P~------~v~g~v~ssapv~ 222 (246)
++++.+.+.--.++.|++.+||||||.++=.+... + |+ ...|++..+.|..
T Consensus 512 ~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 512 ELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred HHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 45555544433457899999999999988655443 2 33 4678888888864
No 227
>PF03283 PAE: Pectinacetylesterase
Probab=77.05 E-value=15 Score=33.90 Aligned_cols=58 Identities=22% Similarity=0.264 Sum_probs=37.5
Q ss_pred HHHHHHHHHHH-cCCCCCCEEEEecChHHHHHHH----HHHHCCCc-eeEEEEecCcccccCCCC
Q 025941 170 YAEILLYIKEK-YNARHSPVIVIGGSYGGMLAAW----FRLKYPHA-ALGALASSAPILYFDDIT 228 (246)
Q Consensus 170 ~a~~i~~l~~~-~~~~~~pvil~G~S~GG~laa~----~~~~yP~~-v~g~v~ssapv~~~~~~~ 228 (246)
+.++++++..+ +. +..+++|.|.|.||.=+.. ++..+|.. -..++.-|+..+...++.
T Consensus 140 ~~avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~ 203 (361)
T PF03283_consen 140 LRAVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYS 203 (361)
T ss_pred HHHHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcc
Confidence 44566777666 32 2357999999999976644 56778853 334455667766665553
No 228
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=76.02 E-value=17 Score=27.16 Aligned_cols=83 Identities=22% Similarity=0.193 Sum_probs=47.7
Q ss_pred hHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChH
Q 025941 117 IGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYG 196 (246)
Q Consensus 117 ~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~G 196 (246)
...+.+.....|+-.=.+..|-+|.+... .++.... +-=...|+.+.+.+ ++.+++++|=|=-
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~--------------~~~~~~~-~~K~~~i~~i~~~f--P~~kfiLIGDsgq 75 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSG--------------LFKSGAE-EHKRDNIERILRDF--PERKFILIGDSGQ 75 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccc--------------cccCCch-hHHHHHHHHHHHHC--CCCcEEEEeeCCC
Confidence 34666666666655555666766554310 0111011 01112344555555 5678999998855
Q ss_pred H--HHHHHHHHHCCCceeEEEE
Q 025941 197 G--MLAAWFRLKYPHAALGALA 216 (246)
Q Consensus 197 G--~laa~~~~~yP~~v~g~v~ 216 (246)
. -+-+.++.+||+.|.++.+
T Consensus 76 ~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 76 HDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred cCHHHHHHHHHHCCCCEEEEEE
Confidence 4 3445678899999988764
No 229
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=75.66 E-value=10 Score=32.59 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=26.3
Q ss_pred CCCCEEEEecChHHHHHHHHHHHC---CC---ceeEEEEecCcccc
Q 025941 184 RHSPVIVIGGSYGGMLAAWFRLKY---PH---AALGALASSAPILY 223 (246)
Q Consensus 184 ~~~pvil~G~S~GG~laa~~~~~y---P~---~v~g~v~ssapv~~ 223 (246)
.+.+++++|.|.|+.++...+.+. ++ .....++.+-|-..
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~rp 91 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRRP 91 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCCC
Confidence 467899999999999997765442 11 22345555656443
No 230
>PLN02840 tRNA dimethylallyltransferase
Probab=74.76 E-value=22 Score=33.60 Aligned_cols=90 Identities=16% Similarity=0.168 Sum_probs=52.7
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc--c----cCCCCCCCchhhh-----ccccccCCCCHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY--Y----GKSIPFGSRKEAL-----KNASTLGYFNSA 164 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg--y----G~S~p~~~~~~~~-----~~~~~l~~lt~~ 164 (246)
.+.+++++.|..+..... +...+++++++.++..|-.. . |...|........ .-.+.-..++..
T Consensus 19 ~~~~vi~I~GptgsGKTt-----la~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~ 93 (421)
T PLN02840 19 KKEKVIVISGPTGAGKSR-----LALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVG 93 (421)
T ss_pred cCCeEEEEECCCCCCHHH-----HHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHH
Confidence 445677777877766543 55688899999999988642 2 2233321100000 000112345777
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecC
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGS 194 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S 194 (246)
+..+|....|+.+... +...||+||+
T Consensus 94 ~F~~~A~~~I~~i~~r----gkiPIvVGGT 119 (421)
T PLN02840 94 AFFDDARRATQDILNR----GRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHHHhc----CCCEEEEcCc
Confidence 7888888888777553 3445788876
No 231
>PLN02748 tRNA dimethylallyltransferase
Probab=73.49 E-value=24 Score=33.79 Aligned_cols=90 Identities=17% Similarity=0.234 Sum_probs=55.3
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEc--cccccCCCCCCCch--h--hh-----ccccccCCCCHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIE--HRYYGKSIPFGSRK--E--AL-----KNASTLGYFNSA 164 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d--~RgyG~S~p~~~~~--~--~~-----~~~~~l~~lt~~ 164 (246)
.+++|+++.|-.|.... .+..++|..+++.+|..| +-|-|....+...+ + .. ...+.-..++..
T Consensus 20 ~~~~~i~i~GptgsGKs-----~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~ 94 (468)
T PLN02748 20 GKAKVVVVMGPTGSGKS-----KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAK 94 (468)
T ss_pred CCCCEEEEECCCCCCHH-----HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHH
Confidence 35678888998777654 355788999999999999 34545432221110 0 00 001112346777
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecC
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGS 194 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S 194 (246)
+...|....|+.+... +...||+|||
T Consensus 95 ~F~~~A~~~I~~I~~r----gk~PIlVGGT 120 (468)
T PLN02748 95 DFRDHAVPLIEEILSR----NGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHHhc----CCCeEEEcCh
Confidence 8888888888877653 3446788876
No 232
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=71.55 E-value=3.7 Score=30.47 Aligned_cols=27 Identities=26% Similarity=0.124 Sum_probs=16.6
Q ss_pred CcchhhhHHHHHHHHHHHHhhhhcccc
Q 025941 1 MHSSIASYQWLLYIFTVISSLQVSAAR 27 (246)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (246)
|-|-++++.-|+|+++||++.-++|..
T Consensus 1 MaSK~~llL~l~LA~lLlisSevaa~~ 27 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISSEVAARE 27 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHhhhhhHH
Confidence 667666666666666665555466554
No 233
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=65.47 E-value=54 Score=29.62 Aligned_cols=89 Identities=16% Similarity=0.187 Sum_probs=53.2
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccc--ccc----CCCCCCCchhhh-----ccccccCCCCHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHR--YYG----KSIPFGSRKEAL-----KNASTLGYFNSAQA 166 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~R--gyG----~S~p~~~~~~~~-----~~~~~l~~lt~~q~ 166 (246)
.+++++.|-.+.... ..-.++|+++|+-||..|-. |-| ...|........ .--+....++..+.
T Consensus 3 ~~~i~I~GPTAsGKT-----~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f 77 (308)
T COG0324 3 PKLIVIAGPTASGKT-----ALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEF 77 (308)
T ss_pred ccEEEEECCCCcCHH-----HHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHH
Confidence 457777776655543 35679999999999999865 223 233321100000 00012235677888
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecCh
Q 025941 167 ITDYAEILLYIKEKYNARHSPVIVIGGSY 195 (246)
Q Consensus 167 l~D~a~~i~~l~~~~~~~~~pvil~G~S~ 195 (246)
..|+...++.+... +...|++|||+
T Consensus 78 ~~~a~~~i~~i~~r----gk~pIlVGGTg 102 (308)
T COG0324 78 QRDALAAIDDILAR----GKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHHHHhC----CCCcEEEccHH
Confidence 88888888777653 34467888875
No 234
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=65.36 E-value=50 Score=29.73 Aligned_cols=87 Identities=17% Similarity=0.225 Sum_probs=48.0
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccc--cccCCCCCCCchhh---------hccccccCCCCHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHR--YYGKSIPFGSRKEA---------LKNASTLGYFNSAQA 166 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~R--gyG~S~p~~~~~~~---------~~~~~~l~~lt~~q~ 166 (246)
.+++++.|..+..... +..++|+++++.++..|-+ |.|-+..+...... +...+....++..+.
T Consensus 4 ~~~i~i~GptgsGKt~-----la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f 78 (307)
T PRK00091 4 PKVIVIVGPTASGKTA-----LAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADF 78 (307)
T ss_pred ceEEEEECCCCcCHHH-----HHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHH
Confidence 4688888887776542 4567888999999999886 33433222111000 000011223456666
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEec
Q 025941 167 ITDYAEILLYIKEKYNARHSPVIVIGG 193 (246)
Q Consensus 167 l~D~a~~i~~l~~~~~~~~~pvil~G~ 193 (246)
+++....++.+..+ +...+++|+
T Consensus 79 ~~~a~~~i~~i~~~----gk~pIlvGG 101 (307)
T PRK00091 79 QRDALAAIADILAR----GKLPILVGG 101 (307)
T ss_pred HHHHHHHHHHHHhC----CCCEEEECc
Confidence 77766666655432 233556643
No 235
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=64.88 E-value=38 Score=29.21 Aligned_cols=101 Identities=23% Similarity=0.179 Sum_probs=57.8
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc----ccC--CCC---CCCc---h---hhh--ccc-ccc
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY----YGK--SIP---FGSR---K---EAL--KNA-STL 158 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg----yG~--S~p---~~~~---~---~~~--~~~-~~l 158 (246)
+.-|+.+||.-.+...+....|-+.+..++. +.++++|-+- -+. +.+ .... + ..+ .|. ..-
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 4568999999988888777777777777666 7888887762 111 111 0000 0 000 011 112
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHH
Q 025941 159 GYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 159 ~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~ 205 (246)
.+...+..++ .+.++++++-.-+. |+|.|-|+.|++.+..
T Consensus 84 ~~~~~eesl~---yl~~~i~enGPFDG----llGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 84 EYFGFEESLE---YLEDYIKENGPFDG----LLGFSQGAALAALLAG 123 (230)
T ss_pred cccChHHHHH---HHHHHHHHhCCCcc----ccccchhHHHHHHhhc
Confidence 2333334333 33445555433344 8899999999998876
No 236
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=58.02 E-value=45 Score=33.09 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHcC--CCCCCEEEEecChHHHHHHHHHHHCC-CceeEEEEecCccccc
Q 025941 161 FNSAQAITDYAEILLYIKEKYN--ARHSPVIVIGGSYGGMLAAWFRLKYP-HAALGALASSAPILYF 224 (246)
Q Consensus 161 lt~~q~l~D~a~~i~~l~~~~~--~~~~pvil~G~S~GG~laa~~~~~yP-~~v~g~v~ssapv~~~ 224 (246)
.++.+.++-+..|.+....+.. .+..++||+|.|||..++.....-.- ..|+++|-.+=|+.-.
T Consensus 223 ~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~v 289 (784)
T KOG3253|consen 223 ANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTV 289 (784)
T ss_pred cchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCC
Confidence 4667788887777775443332 36679999999999777776655433 3477777666565433
No 237
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=57.24 E-value=44 Score=29.79 Aligned_cols=87 Identities=13% Similarity=0.148 Sum_probs=48.6
Q ss_pred EEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc--ccCCCCCCCchh----hh-----ccccccCCCCHHHHHH
Q 025941 100 IFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY--YGKSIPFGSRKE----AL-----KNASTLGYFNSAQAIT 168 (246)
Q Consensus 100 I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg--yG~S~p~~~~~~----~~-----~~~~~l~~lt~~q~l~ 168 (246)
|+++.|-.+.... .+..++++++++.++..|-+- -|-+..+..... .. ...+.-..++..+...
T Consensus 1 vi~i~G~t~~GKs-----~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~ 75 (287)
T TIGR00174 1 VIFIMGPTAVGKS-----QLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQT 75 (287)
T ss_pred CEEEECCCCCCHH-----HHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHH
Confidence 3566777666543 255788889999999998753 232222111000 00 0001123456666777
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecCh
Q 025941 169 DYAEILLYIKEKYNARHSPVIVIGGSY 195 (246)
Q Consensus 169 D~a~~i~~l~~~~~~~~~pvil~G~S~ 195 (246)
+....|+.+.+. +...+++|||.
T Consensus 76 ~a~~~i~~~~~~----g~~pi~vGGTg 98 (287)
T TIGR00174 76 LALNAIADITAR----GKIPLLVGGTG 98 (287)
T ss_pred HHHHHHHHHHhC----CCCEEEEcCcH
Confidence 777777766542 34468888773
No 238
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=56.99 E-value=17 Score=29.45 Aligned_cols=43 Identities=21% Similarity=0.417 Sum_probs=26.2
Q ss_pred CCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025941 128 NALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGG 197 (246)
Q Consensus 128 g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG 197 (246)
|..|+++|-||== +++++ ++..++..+.. + ..=.+++|+|+|=
T Consensus 67 ~~~vi~Ld~~Gk~--------------------~sSe~----fA~~l~~~~~~-G--~~i~f~IGG~~Gl 109 (155)
T COG1576 67 GSYVVLLDIRGKA--------------------LSSEE----FADFLERLRDD-G--RDISFLIGGADGL 109 (155)
T ss_pred CCeEEEEecCCCc--------------------CChHH----HHHHHHHHHhc-C--CeEEEEEeCcccC
Confidence 6789999999721 23333 44445544432 1 2237899999993
No 239
>PLN02165 adenylate isopentenyltransferase
Probab=52.83 E-value=93 Score=28.45 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=27.3
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccc
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHR 137 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~R 137 (246)
++.++++.|-.+..... +...+|..+++.++..|-.
T Consensus 42 ~g~iivIiGPTGSGKSt-----LA~~LA~~l~~eIIsaDs~ 77 (334)
T PLN02165 42 KDKVVVIMGATGSGKSR-----LSVDLATRFPSEIINSDKM 77 (334)
T ss_pred CCCEEEEECCCCCcHHH-----HHHHHHHHcCCceecCChh
Confidence 46688999988876543 5567888888888888766
No 240
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=52.01 E-value=11 Score=25.64 Aligned_cols=20 Identities=20% Similarity=0.322 Sum_probs=10.4
Q ss_pred CCCCcEEEEeCCCCCCCcch
Q 025941 95 DANAPIFVYLGAEESLDGDI 114 (246)
Q Consensus 95 ~~~~pI~l~~Gg~~~~~~~~ 114 (246)
..++||++.||-.+++..|.
T Consensus 41 ~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 41 KKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp TT--EEEEE--TT--GGGGC
T ss_pred CCCCcEEEECCcccChHHHH
Confidence 35678999999988887654
No 241
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=49.64 E-value=20 Score=29.03 Aligned_cols=43 Identities=16% Similarity=0.270 Sum_probs=27.5
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHcCC--CCCCEEEEecChHHH
Q 025941 156 STLGYFNSAQAITDYAEILLYIKEKYNA--RHSPVIVIGGSYGGM 198 (246)
Q Consensus 156 ~~l~~lt~~q~l~D~a~~i~~l~~~~~~--~~~pvil~G~S~GG~ 198 (246)
..+.-.+.++...-+..+-..+++++.. ...++.++|+|++..
T Consensus 72 ~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 72 QTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp SEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3455556666655565666788877643 345899999999887
No 242
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=48.49 E-value=1.9e+02 Score=25.38 Aligned_cols=37 Identities=16% Similarity=0.244 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025941 169 DYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK 206 (246)
Q Consensus 169 D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~ 206 (246)
.+......+.+++. +...++++|.|-|+..|-.++..
T Consensus 76 ~I~~ay~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 76 RIRDAYRFLSKNYE-PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHhccC-CcceEEEEecCccHHHHHHHHHH
Confidence 33444444555553 44579999999999999777654
No 243
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=44.41 E-value=1.6e+02 Score=26.44 Aligned_cols=87 Identities=13% Similarity=0.178 Sum_probs=50.9
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccc------cCCCCCCCchhhh-----ccccccCCCCHHHH
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYY------GKSIPFGSRKEAL-----KNASTLGYFNSAQA 166 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rgy------G~S~p~~~~~~~~-----~~~~~l~~lt~~q~ 166 (246)
.+|+++.|-.+.... .+-.++|++ ++-+|..|-+-. |...|........ ...+....++..+.
T Consensus 4 ~~ii~I~GpTasGKS-----~LAl~LA~~-~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f 77 (300)
T PRK14729 4 NKIVFIFGPTAVGKS-----NILFHFPKG-KAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIF 77 (300)
T ss_pred CcEEEEECCCccCHH-----HHHHHHHHh-CCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHH
Confidence 468888887776654 355688888 568998886532 2233321100000 00112234677778
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecC
Q 025941 167 ITDYAEILLYIKEKYNARHSPVIVIGGS 194 (246)
Q Consensus 167 l~D~a~~i~~l~~~~~~~~~pvil~G~S 194 (246)
.+|....|+.+... +...+++||+
T Consensus 78 ~~~a~~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 78 YKEALKIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHHHHHC----CCCEEEEeCc
Confidence 88888888776543 3446888876
No 244
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=44.13 E-value=21 Score=28.87 Aligned_cols=52 Identities=23% Similarity=0.343 Sum_probs=27.7
Q ss_pred cCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHH
Q 025941 127 FNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLK 206 (246)
Q Consensus 127 ~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~ 206 (246)
-+..+|++|-+|-- ++++ +++..+......- ...-++++|+++| +.-.++.+
T Consensus 66 ~~~~~i~Ld~~Gk~--------------------~sS~----~fA~~l~~~~~~g--~~~i~F~IGG~~G--~~~~~~~~ 117 (155)
T PF02590_consen 66 PNDYVILLDERGKQ--------------------LSSE----EFAKKLERWMNQG--KSDIVFIIGGADG--LSEEVRKR 117 (155)
T ss_dssp TTSEEEEE-TTSEE----------------------HH----HHHHHHHHHHHTT--S-EEEEEE-BTTB----HHHHHH
T ss_pred CCCEEEEEcCCCcc--------------------CChH----HHHHHHHHHHhcC--CceEEEEEecCCC--CCHHHHhh
Confidence 47789999988622 2333 4555555544321 1234899999998 55555555
No 245
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=44.06 E-value=32 Score=27.85 Aligned_cols=44 Identities=25% Similarity=0.393 Sum_probs=26.1
Q ss_pred CCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025941 128 NALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGG 197 (246)
Q Consensus 128 g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG 197 (246)
+..+|++|-+|- + ++++ +++.+++..... ....-++++|+++|=
T Consensus 67 ~~~~i~LDe~Gk--~------------------~sS~----~fA~~l~~~~~~--g~~~i~F~IGGa~G~ 110 (157)
T PRK00103 67 GARVIALDERGK--Q------------------LSSE----EFAQELERWRDD--GRSDVAFVIGGADGL 110 (157)
T ss_pred CCEEEEEcCCCC--c------------------CCHH----HHHHHHHHHHhc--CCccEEEEEcCcccc
Confidence 557999999862 1 2333 345555544221 112358999999984
No 246
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=43.49 E-value=1e+02 Score=27.54 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=52.8
Q ss_pred HHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025941 118 GFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGG 197 (246)
Q Consensus 118 g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG 197 (246)
..+.++.++.|.+|+++=||-=-.|. ++- .-.++. .++|...+++.+++.- ++.++.++=|+.||
T Consensus 38 ~~i~~ie~kr~srvI~~Ihrqe~~~~-~gi--------Pi~~~I----~i~dse~v~raI~~~~--~~~~IdLii~TpGG 102 (285)
T PF01972_consen 38 RLIREIEEKRGSRVITLIHRQERVSF-LGI--------PIYRYI----DIDDSEFVLRAIREAP--KDKPIDLIIHTPGG 102 (285)
T ss_pred HHHHHHHHHhCCEEEEEEEeccccce-ecc--------ccceeE----cHhhHHHHHHHHHhcC--CCCceEEEEECCCC
Confidence 35667788889999999887311111 000 011222 3467777777777643 34578899999999
Q ss_pred HHHHHH-----HHHCCCceeEEE
Q 025941 198 MLAAWF-----RLKYPHAALGAL 215 (246)
Q Consensus 198 ~laa~~-----~~~yP~~v~g~v 215 (246)
.+.+.. ..++|..+...|
T Consensus 103 ~v~AA~~I~~~l~~~~~~v~v~V 125 (285)
T PF01972_consen 103 LVDAAEQIARALREHPAKVTVIV 125 (285)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEE
Confidence 887554 346888877766
No 247
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=39.25 E-value=3.3e+02 Score=25.60 Aligned_cols=110 Identities=18% Similarity=0.159 Sum_probs=57.4
Q ss_pred EEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCch--h-hhccc---cccCCC-CHHHHHHHHH--
Q 025941 101 FVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRK--E-ALKNA---STLGYF-NSAQAITDYA-- 171 (246)
Q Consensus 101 ~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~--~-~~~~~---~~l~~l-t~~q~l~D~a-- 171 (246)
|++.|--..-... ..|+.+...+.|..++.+|--=.|......+.. + +.... +.+... +-.++++-..
T Consensus 4 I~iigT~DTK~~E---~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 4 IAIIGTLDTKGEE---LLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred EEEEEccCCCHHH---HHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 5555544333222 347788888899999999985555443221211 0 00000 111111 2223333332
Q ss_pred --HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEE
Q 025941 172 --EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGAL 215 (246)
Q Consensus 172 --~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v 215 (246)
.++..+-.+-..+. ++-+|+|.|..|++-..+..|=-+=+++
T Consensus 81 a~~~v~~l~~~g~i~G--vi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDG--VIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHHHhcCCccE--EEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 33333322212233 8999999999999998877665444444
No 248
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.68 E-value=1.3e+02 Score=27.73 Aligned_cols=109 Identities=20% Similarity=0.212 Sum_probs=63.0
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILL 175 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~ 175 (246)
...||+++.|+.|..+.+.. -..++-++.|+.++-+--+-+-...+ .+...+ ++.+....+.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~---ky~~~Yq~~g~~~~~~tap~~~~~~~-----------~s~~~~----sl~~~~~~l~ 98 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLM---KYSKIYQDKGYIVVRITAPCPSVFLS-----------ASRRIL----SLSLASTRLS 98 (350)
T ss_pred ccccEEEEeeeccccchhHH---HHHHHHhcCCceEEEecCcccccccc-----------cccccc----hhhHHHHHHH
Confidence 34699999999998887432 22334445677777664443322221 111222 3334445555
Q ss_pred HHHHHcCCCCCCEEEEecChHHHHHH---HHHH-HC-C---CceeEEEEecCccc
Q 025941 176 YIKEKYNARHSPVIVIGGSYGGMLAA---WFRL-KY-P---HAALGALASSAPIL 222 (246)
Q Consensus 176 ~l~~~~~~~~~pvil~G~S~GG~laa---~~~~-~y-P---~~v~g~v~ssapv~ 222 (246)
.+.+.++.+..|++.--.|+||.... |++. +. | +...+.+..|+|..
T Consensus 99 ~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 99 ELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred HHhhhccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 55566655677888888899986542 2322 22 3 34566777777765
No 249
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=38.02 E-value=49 Score=28.26 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=23.7
Q ss_pred CCEEEEecChHHHHHHHHHHHCCCceeEEEEecCc
Q 025941 186 SPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAP 220 (246)
Q Consensus 186 ~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssap 220 (246)
..+.|+++|||=..|..+....| +..+++..+-
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT 89 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGIP--FKRAIAINGT 89 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccCC--cceeEEEECC
Confidence 45999999999988888766554 4555555543
No 250
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=36.81 E-value=1.1e+02 Score=21.85 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEecChHHHHHHHHHHHCCC
Q 025941 168 TDYAEILLYIKEKYNA-RHSPVIVIGGSYGGMLAAWFRLKYPH 209 (246)
Q Consensus 168 ~D~a~~i~~l~~~~~~-~~~pvil~G~S~GG~laa~~~~~yP~ 209 (246)
+.+.+-|++++.+-.. ..++|.++|.|-|=.||+.....+--
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 4445555566553322 23579999999999999888877643
No 251
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=36.26 E-value=1.1e+02 Score=24.62 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEE
Q 025941 164 AQAITDYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGAL 215 (246)
Q Consensus 164 ~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v 215 (246)
++..+++.++++.++. ++.++.++|.|-.|..-+.+.-.-++.+..++
T Consensus 51 ~~~~~~l~~~L~~~~~----~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 51 EQSKAELREFLEKLKA----EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHHH----TT--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHHH----cCCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 4455556666665555 34679999999999988888776677665554
No 252
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=34.61 E-value=61 Score=29.00 Aligned_cols=37 Identities=19% Similarity=0.113 Sum_probs=26.5
Q ss_pred CCCEEEEecChHHHHHHHHHHHCC---CceeEEEEecCcc
Q 025941 185 HSPVIVIGGSYGGMLAAWFRLKYP---HAALGALASSAPI 221 (246)
Q Consensus 185 ~~pvil~G~S~GG~laa~~~~~yP---~~v~g~v~ssapv 221 (246)
..|++++|.|+|..-+.......+ +.++|++.+++|-
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 347999999999877655433322 4589999888774
No 253
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=33.17 E-value=4e+02 Score=26.53 Aligned_cols=96 Identities=22% Similarity=0.237 Sum_probs=52.0
Q ss_pred CCCcEEEEeCCCCCCCcchh---hhHHHHHHHHHcCCeEEEEc-----cccccC-CCCCCCchhhhccccccCCCCHHHH
Q 025941 96 ANAPIFVYLGAEESLDGDIS---VIGFLTDNAARFNALLVYIE-----HRYYGK-SIPFGSRKEALKNASTLGYFNSAQA 166 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~---~~g~~~~~a~~~g~~vv~~d-----~RgyG~-S~p~~~~~~~~~~~~~l~~lt~~q~ 166 (246)
.+-|+=+-.|-.-....... ..-.-.++|.-.|+.-|++- -||||. |.|...+ +.--
T Consensus 257 ~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekr--------------TRvR 322 (655)
T COG3887 257 KNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKR--------------TRVR 322 (655)
T ss_pred cCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHh--------------HHHH
Confidence 45688888773332222211 11122366777788777763 567864 5442211 1223
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEec------ChHHHHHHH-HHHHCCC
Q 025941 167 ITDYAEILLYIKEKYNARHSPVIVIGG------SYGGMLAAW-FRLKYPH 209 (246)
Q Consensus 167 l~D~a~~i~~l~~~~~~~~~pvil~G~------S~GG~laa~-~~~~yP~ 209 (246)
.+++...++.+... ..+|+++|| +.|++++.. ++...-+
T Consensus 323 aRvis~al~d~i~e----~d~VfImGHk~pDmDalGsAig~~~~A~~~~~ 368 (655)
T COG3887 323 ARVISTALSDIIKE----SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK 368 (655)
T ss_pred HHHHHHHHHHHHhh----cCcEEEEccCCCChHHHHHHHHHHHHHHhccc
Confidence 34444444444332 356999999 678888866 4444444
No 254
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=32.62 E-value=98 Score=28.06 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCh
Q 025941 119 FLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSY 195 (246)
Q Consensus 119 ~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~ 195 (246)
|....-++||+.++.+-+-+.+ | .+..-...++++++..+++.++ .| |++|+|=
T Consensus 155 WArk~Vk~fgadmvTiHlIsTd---P------------ki~D~p~~EAak~lEdvLqAVd-------vP-iiiGGSG 208 (403)
T COG2069 155 WARKCVKKFGADMVTIHLISTD---P------------KIKDTPAKEAAKTLEDVLQAVD-------VP-IIIGGSG 208 (403)
T ss_pred HHHHHHHHhCCceEEEEeecCC---c------------cccCCCHHHHHHHHHHHHHhcC-------cC-EEecCCC
Confidence 4455567899999999776433 2 2223356788888887777653 44 5668874
No 255
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=31.36 E-value=3.6e+02 Score=23.64 Aligned_cols=72 Identities=24% Similarity=0.246 Sum_probs=45.3
Q ss_pred eEEEEccc---cccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecChHHHHHHHHHH
Q 025941 130 LLVYIEHR---YYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEK-YNARHSPVIVIGGSYGGMLAAWFRL 205 (246)
Q Consensus 130 ~vv~~d~R---gyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~-~~~~~~pvil~G~S~GG~laa~~~~ 205 (246)
.+|++|.. |.|++. |.+ ..+.+..+|+..... ++....-.|++|+|--..-+..+..
T Consensus 161 ~vIAYEPvWAIGTG~~a------------------t~~-~a~~v~~~Ir~~~~~~~~~~~~v~IlYGGSV~~~N~~e~~~ 221 (251)
T COG0149 161 IVIAYEPVWAIGTGKSA------------------SPA-DAEEVHAFIRAVLAELFGAEEKVRILYGGSVKPGNAAELAA 221 (251)
T ss_pred eEEEECCHHHhcCCCCC------------------CHH-HHHHHHHHHHHHHHHhcCCCCCeEEEEeCCcChhHHHHHhc
Confidence 89999887 566653 122 234455555554433 3333334578899988877777766
Q ss_pred HCCCceeEEEEecCccc
Q 025941 206 KYPHAALGALASSAPIL 222 (246)
Q Consensus 206 ~yP~~v~g~v~ssapv~ 222 (246)
. | .++|+++.+|-+.
T Consensus 222 ~-~-~idG~LVGgAslk 236 (251)
T COG0149 222 Q-P-DIDGALVGGASLK 236 (251)
T ss_pred C-C-CCCeEEEcceeec
Confidence 5 3 4689888776654
No 256
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=30.92 E-value=31 Score=27.65 Aligned_cols=18 Identities=17% Similarity=0.342 Sum_probs=16.1
Q ss_pred cChHHHHHHHHHHHCCCc
Q 025941 193 GSYGGMLAAWFRLKYPHA 210 (246)
Q Consensus 193 ~S~GG~laa~~~~~yP~~ 210 (246)
+.||+.+|..++.+||+.
T Consensus 29 g~mG~GIA~~~k~~~P~~ 46 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQI 46 (154)
T ss_pred CcCChHHHHHHHHHcChH
Confidence 489999999999999963
No 257
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=30.90 E-value=1.1e+02 Score=25.60 Aligned_cols=51 Identities=25% Similarity=0.277 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEecChHHH--------HHHHHHHHCCCceeEEEEe
Q 025941 165 QAITDYAEILLYIKEKYNARHSPVIVIGGSYGGM--------LAAWFRLKYPHAALGALAS 217 (246)
Q Consensus 165 q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG~--------laa~~~~~yP~~v~g~v~s 217 (246)
++++++.+.|+...++. +....+++=||+||. ++-.++..||+....+++.
T Consensus 105 ~~~~~~~~~ir~~~e~~--d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~i 163 (216)
T PF00091_consen 105 EALEEILEQIRKEIEKC--DSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSI 163 (216)
T ss_dssp HHHHHHHHHHHHHHHTS--TTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEE
T ss_pred ccccccccccchhhccc--cccccceecccccceeccccccccchhhhccccccceeeccc
Confidence 35555555555544333 344577777777764 3444566799876665543
No 258
>PRK02399 hypothetical protein; Provisional
Probab=30.66 E-value=1.6e+02 Score=27.63 Aligned_cols=111 Identities=16% Similarity=0.106 Sum_probs=55.0
Q ss_pred EEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCc--hh-hhccccc----cCCCCHHHHHHHH--
Q 025941 100 IFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSR--KE-ALKNAST----LGYFNSAQAITDY-- 170 (246)
Q Consensus 100 I~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~--~~-~~~~~~~----l~~lt~~q~l~D~-- 170 (246)
-|++.|--...... ..|+.+...+.|..|+.+|--..|+.....+. .+ +...... ..-..-.++++-.
T Consensus 5 ~I~iigT~DTK~~E---~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ 81 (406)
T PRK02399 5 RIYIAGTLDTKGEE---LAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAE 81 (406)
T ss_pred EEEEEeccCCcHHH---HHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHH
Confidence 35666654443322 34777777788999999998333322111110 00 0000000 0101112222222
Q ss_pred --HHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEE
Q 025941 171 --AEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGAL 215 (246)
Q Consensus 171 --a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v 215 (246)
..+++.+-++-..+. ++-+|+|.|..|++-..+.-|=-+=+++
T Consensus 82 ga~~~v~~L~~~g~i~g--viglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 82 GAAAFVRELYERGDVAG--VIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHHHHhcCCccE--EEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 233333333222233 8999999999999998877665444433
No 259
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=29.98 E-value=67 Score=25.71 Aligned_cols=28 Identities=29% Similarity=0.282 Sum_probs=22.0
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeEE
Q 025941 187 PVIVIGGSYGGMLAAWFRLKYPHAALGA 214 (246)
Q Consensus 187 pvil~G~S~GG~laa~~~~~yP~~v~g~ 214 (246)
+++++|++.+|+.++....+....+.-+
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~~~v~ii 28 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPGAKVLII 28 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEE
T ss_pred CEEEEecHHHHHHHHHHHhcCCCeEEEE
Confidence 3789999999999999888655544444
No 260
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=29.89 E-value=3.7e+02 Score=23.36 Aligned_cols=82 Identities=22% Similarity=0.257 Sum_probs=48.4
Q ss_pred CeEEEEccc---cccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHH-HcC-CCCCCEEEEecChHHHHHHHH
Q 025941 129 ALLVYIEHR---YYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKE-KYN-ARHSPVIVIGGSYGGMLAAWF 203 (246)
Q Consensus 129 ~~vv~~d~R---gyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~-~~~-~~~~pvil~G~S~GG~laa~~ 203 (246)
-.++++|.. |.|++- +. +.++++..+|+.... .+. ..+.--+++|+|-...-+..+
T Consensus 160 ~~vIAYEPvWAIGtG~~a------------------s~-~~~~~v~~~Ir~~l~~~~~~~~~~~~IlYGGSV~~~N~~~l 220 (250)
T PRK00042 160 NLVIAYEPVWAIGTGKTA------------------TP-EQAQEVHAFIRAVLAELYGEVAEKVRILYGGSVKPDNAAEL 220 (250)
T ss_pred CEEEEECCHHHhCCCCCC------------------CH-HHHHHHHHHHHHHHHHhcccccCCceEEEcCCCCHHHHHHH
Confidence 378999887 344442 12 334455555554433 222 112235889999998888887
Q ss_pred HHHCCCceeEEEEecCcccccCCCCCchhhHHHHH
Q 025941 204 RLKYPHAALGALASSAPILYFDDITPQNGYYSIVT 238 (246)
Q Consensus 204 ~~~yP~~v~g~v~ssapv~~~~~~~~~~~y~~~v~ 238 (246)
... |+ ++|+++.+|-+. ...|.+++.
T Consensus 221 ~~~-~~-vDG~LVG~Asl~-------~~~f~~ii~ 246 (250)
T PRK00042 221 MAQ-PD-IDGALVGGASLK-------AEDFLAIVK 246 (250)
T ss_pred hcC-CC-CCEEEEeeeeec-------hHHHHHHHH
Confidence 655 44 689887776542 235666654
No 261
>PLN02429 triosephosphate isomerase
Probab=29.66 E-value=4e+02 Score=24.21 Aligned_cols=33 Identities=27% Similarity=0.296 Sum_probs=24.9
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 187 PVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 187 pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
--|++|+|-...-+..+... ..++|+++.+|-+
T Consensus 264 irILYGGSV~~~N~~el~~~--~diDG~LVGgASL 296 (315)
T PLN02429 264 TRIIYGGSVNGGNSAELAKE--EDIDGFLVGGASL 296 (315)
T ss_pred ceEEEcCccCHHHHHHHhcC--CCCCEEEeeccee
Confidence 36889999988888776655 3469998877765
No 262
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=28.84 E-value=68 Score=27.94 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=19.2
Q ss_pred CEEEEecChHHHHHHHHHHHCCCc
Q 025941 187 PVIVIGGSYGGMLAAWFRLKYPHA 210 (246)
Q Consensus 187 pvil~G~S~GG~laa~~~~~yP~~ 210 (246)
+|+++|++.+|..++....+.-..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G~~ 26 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAGID 26 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTCE
T ss_pred eEEEECCCHHHHHHHHHHHhcccc
Confidence 589999999999999999997544
No 263
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=28.30 E-value=89 Score=25.27 Aligned_cols=34 Identities=29% Similarity=0.263 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 172 EILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 172 ~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
-+++.+.++- . .+=++.|-|.|+.+|+.++..++
T Consensus 16 Gvl~~L~e~~-~--~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 16 GALKALEEAG-I--LKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHcC-C--CcceEEEECHHHHHHHHHHcCCC
Confidence 4555555432 1 23578999999999999998654
No 264
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=27.43 E-value=1.9e+02 Score=25.85 Aligned_cols=43 Identities=28% Similarity=0.364 Sum_probs=29.3
Q ss_pred HHHHHHcCC-CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEec
Q 025941 175 LYIKEKYNA-RHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASS 218 (246)
Q Consensus 175 ~~l~~~~~~-~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ss 218 (246)
+.+.+++.. ++..+.=+|+++|| ++..++.+|-..|.|+-+|-
T Consensus 62 ~~~~~kl~L~~G~~lLDiGCGWG~-l~~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 62 DLILEKLGLKPGMTLLDIGCGWGG-LAIYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHhcCCCCCCEEEEeCCChhH-HHHHHHHHcCCEEEEeeCCH
Confidence 344445554 34456669999986 56777888878888887653
No 265
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=27.08 E-value=1e+02 Score=24.78 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=26.0
Q ss_pred CCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecChHH
Q 025941 128 NALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIGGSYGG 197 (246)
Q Consensus 128 g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G~S~GG 197 (246)
+..||++|-||-= ++++ +++.+++..... ...-++++|+++|=
T Consensus 65 ~~~~i~LDe~Gk~--------------------~sS~----~fA~~l~~~~~~---g~~i~FvIGGa~G~ 107 (153)
T TIGR00246 65 KAHVVTLDIPGKP--------------------WTTP----QLADTLEKWKTD---GRDVTLLIGGPEGL 107 (153)
T ss_pred CCeEEEEcCCCCc--------------------CCHH----HHHHHHHHHhcc---CCeEEEEEcCCCcC
Confidence 4679999998621 2232 345555544322 12358999999984
No 266
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=26.62 E-value=2.2e+02 Score=23.38 Aligned_cols=60 Identities=20% Similarity=0.146 Sum_probs=34.4
Q ss_pred CCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHH
Q 025941 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLY 176 (246)
Q Consensus 97 ~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~ 176 (246)
+.||++.||-....-.... ..-..+..++.+..|-+.+..+-|.+. ..+.+.|+.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~-~~~~~~~L~~~~~~v~~~~~~g~gH~i-------------------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEW-AEKTAEFLKAAGANVEFHEYPGGGHEI-------------------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHH-HHHHHHHHHCTT-GEEEEEETT-SSS---------------------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHH-HHHHHHHHHhcCCCEEEEEcCCCCCCC-------------------CHHHHHHHHHHHhh
Confidence 4589999998887654322 223345556667777777776655554 24667777777654
No 267
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=26.18 E-value=98 Score=28.88 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=21.7
Q ss_pred CEEEEecChHHHHHHHHHHHCCCceeEEEEe
Q 025941 187 PVIVIGGSYGGMLAAWFRLKYPHAALGALAS 217 (246)
Q Consensus 187 pvil~G~S~GG~laa~~~~~yP~~v~g~v~s 217 (246)
+++++|+++||+-++....+......-.++.
T Consensus 3 ~VVIIGgG~aG~~aA~~l~~~~~~~~I~li~ 33 (438)
T PRK13512 3 KIIVVGAVAGGATCASQIRRLDKESDIIIFE 33 (438)
T ss_pred eEEEECCcHHHHHHHHHHHhhCCCCCEEEEE
Confidence 6999999999999988776543333334433
No 268
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=25.49 E-value=1.1e+02 Score=27.58 Aligned_cols=19 Identities=32% Similarity=0.323 Sum_probs=16.4
Q ss_pred EEEecChHHHHHHHHHHHC
Q 025941 189 IVIGGSYGGMLAAWFRLKY 207 (246)
Q Consensus 189 il~G~S~GG~laa~~~~~y 207 (246)
.+.|-|.||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6889999999999988644
No 269
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.99 E-value=1.9e+02 Score=28.38 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=30.8
Q ss_pred CCCCEEEEecChHHHHHHHHH---HH--CCCceeEEEEecCcccccC
Q 025941 184 RHSPVIVIGGSYGGMLAAWFR---LK--YPHAALGALASSAPILYFD 225 (246)
Q Consensus 184 ~~~pvil~G~S~GG~laa~~~---~~--yP~~v~g~v~ssapv~~~~ 225 (246)
.+.|+.++|.|.|.-+...-. .+ -=+.|.-+++.+||+....
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 568999999999998765222 22 3357888999999986443
No 270
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=24.94 E-value=2e+02 Score=21.02 Aligned_cols=41 Identities=24% Similarity=0.227 Sum_probs=25.8
Q ss_pred CcEEEEeCCCCCCCcchhhhHHHHHHHHHcC-CeEEEEccccccCC
Q 025941 98 APIFVYLGAEESLDGDISVIGFLTDNAARFN-ALLVYIEHRYYGKS 142 (246)
Q Consensus 98 ~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g-~~vv~~d~RgyG~S 142 (246)
.||+++.+-......+ . .-..++++++ +.+|..|--|||-.
T Consensus 35 ~piL~l~~~~Dp~TP~-~---~a~~~~~~l~~s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPY-E---GARAMAARLPGSRLVTVDGAGHGVY 76 (103)
T ss_pred CCEEEEecCcCCCCcH-H---HHHHHHHHCCCceEEEEeccCccee
Confidence 5665555543344333 2 3456666766 88999988899866
No 271
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=23.96 E-value=1.1e+02 Score=26.21 Aligned_cols=58 Identities=29% Similarity=0.302 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHHHHHHHcCC--CCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCcc
Q 025941 162 NSAQAITDYAEILLYIKEKYNA--RHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPI 221 (246)
Q Consensus 162 t~~q~l~D~a~~i~~l~~~~~~--~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv 221 (246)
|.+|+.+-.+.+.++++.+... ....-|++|+|--|.-+..++.+ || ++|.+.-+|-+
T Consensus 176 tp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g~N~~el~~~-~d-iDGFLVGGaSL 235 (247)
T KOG1643|consen 176 TPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNGGNCKELAKK-PD-IDGFLVGGASL 235 (247)
T ss_pred CHHHHHHHHHHHHHHHhhcchhhhhhceEEEeccccccccHHHhccc-cc-ccceEEcCccc
Confidence 4567666666777777776542 22345788999999988888766 44 68888766654
No 272
>PF13552 DUF4127: Protein of unknown function (DUF4127)
Probab=23.94 E-value=1.7e+02 Score=28.28 Aligned_cols=62 Identities=19% Similarity=0.318 Sum_probs=40.9
Q ss_pred hHHHHHHHHHcCCeEEEEccccccCCCCCCCchhhhccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe
Q 025941 117 IGFLTDNAARFNALLVYIEHRYYGKSIPFGSRKEALKNASTLGYFNSAQAITDYAEILLYIKEKYNARHSPVIVIG 192 (246)
Q Consensus 117 ~g~~~~~a~~~g~~vv~~d~RgyG~S~p~~~~~~~~~~~~~l~~lt~~q~l~D~a~~i~~l~~~~~~~~~pvil~G 192 (246)
..|+.+.+.+..+.|+.+|+--||.=.|. .....+.+++.+- ...++.+++.. ++.|+.+++
T Consensus 49 ~~Wl~~~~~~~d~~ViS~D~L~yGGLv~S-----------R~~~~~~~~~~~r-l~~l~~lk~~~--p~~~iyaf~ 110 (497)
T PF13552_consen 49 WDWLEENAPDADAAVISTDMLLYGGLVPS-----------RIHHLSLEEALER-LERLRELKARN--PNLPIYAFS 110 (497)
T ss_pred HHHHHhccccCCEEEEEHHhhhhcCcHhh-----------cCCCCCHHHHHHH-HHHHHHHHHHC--CCCeEEEEE
Confidence 35777777777889999999999965441 2233444444433 35667777765 456777775
No 273
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=23.54 E-value=2e+02 Score=23.41 Aligned_cols=48 Identities=29% Similarity=0.322 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCCCceeEEEEecCccccc
Q 025941 169 DYAEILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYPHAALGALASSAPILYF 224 (246)
Q Consensus 169 D~a~~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ssapv~~~ 224 (246)
|+...++.+++. + ...+.+.| ||.++..+... ++|+-+.+.-+|++--
T Consensus 122 dl~~~l~~L~~~-g--~~~i~v~G---G~~l~~~~l~~--gLvDEl~l~i~Pv~lG 169 (200)
T PF01872_consen 122 DLEEALRRLKER-G--GKDILVEG---GGSLNGSFLRA--GLVDELSLTIAPVLLG 169 (200)
T ss_dssp HHHHHHHHHHHT-T--TSEEEEEE---HHHHHHHHHHT--T--SEEEEEEESEE-S
T ss_pred CHHHHHHHHHhc-C--CCEEEEec---hHHHHHHHHhC--CCCCEEEEEEeeEEeC
Confidence 677778888875 3 23466666 66666666555 7888888877777533
No 274
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=22.51 E-value=4.2e+02 Score=21.96 Aligned_cols=21 Identities=14% Similarity=0.208 Sum_probs=17.6
Q ss_pred CEEEEecCh----HHHHHHHHHHHC
Q 025941 187 PVIVIGGSY----GGMLAAWFRLKY 207 (246)
Q Consensus 187 pvil~G~S~----GG~laa~~~~~y 207 (246)
.++++|+|. |+.++...+.+-
T Consensus 110 ~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 110 DLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CEEEEcCCcccCCcCcHHHHHHHHh
Confidence 499999999 889998887763
No 275
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=22.12 E-value=1.4e+02 Score=25.20 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=21.0
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCe
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNAL 130 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~ 130 (246)
.+.||||+.||+|+..... =.+++.++|+.
T Consensus 6 ~~~~IifVlGGPGsgKgTq-----C~kiv~ky~ft 35 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSGKGTQ-----CEKIVEKYGFT 35 (195)
T ss_pred cCCCEEEEEcCCCCCcchH-----HHHHHHHcCce
Confidence 4579999999999887642 24556666533
No 276
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=22.02 E-value=1.7e+02 Score=26.84 Aligned_cols=31 Identities=19% Similarity=0.167 Sum_probs=22.5
Q ss_pred CCEEEEecChHHHHHHHHHHHCCCceeEEEE
Q 025941 186 SPVIVIGGSYGGMLAAWFRLKYPHAALGALA 216 (246)
Q Consensus 186 ~pvil~G~S~GG~laa~~~~~yP~~v~g~v~ 216 (246)
.+++++|++++|+-++....+......-.++
T Consensus 4 ~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li 34 (396)
T PRK09754 4 KTIIIVGGGQAAAMAAASLRQQGFTGELHLF 34 (396)
T ss_pred CcEEEECChHHHHHHHHHHHhhCCCCCEEEe
Confidence 4799999999999998887765443333333
No 277
>PRK06475 salicylate hydroxylase; Provisional
Probab=21.29 E-value=1.2e+02 Score=27.78 Aligned_cols=23 Identities=17% Similarity=0.166 Sum_probs=19.8
Q ss_pred CCEEEEecChHHHHHHHHHHHCC
Q 025941 186 SPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 186 ~pvil~G~S~GG~laa~~~~~yP 208 (246)
.+++++|++.+|..++....+..
T Consensus 3 ~~V~IvGgGiaGl~~A~~L~~~G 25 (400)
T PRK06475 3 GSPLIAGAGVAGLSAALELAARG 25 (400)
T ss_pred CcEEEECCCHHHHHHHHHHHhCC
Confidence 46999999999999998887753
No 278
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=20.94 E-value=1.5e+02 Score=23.65 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=23.6
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
+++.+.++- . .+-.+.|-|.|+.+++.++...+
T Consensus 16 vl~aL~e~g-i--~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERG-P--LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcC-C--CCCEEEEECHHHHHHHHHHcCCC
Confidence 445555432 1 25688999999999999998654
No 279
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=20.93 E-value=1.3e+02 Score=26.97 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=22.9
Q ss_pred HHHHHHHHcCCCCCCEEEEecChHHHHHHHHHHHCC
Q 025941 173 ILLYIKEKYNARHSPVIVIGGSYGGMLAAWFRLKYP 208 (246)
Q Consensus 173 ~i~~l~~~~~~~~~pvil~G~S~GG~laa~~~~~yP 208 (246)
+++.+.++ +. .+=.+.|-|+|+.+++.++..++
T Consensus 33 vL~aLee~-gi--~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 33 VIKALEEA-GI--PVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCC
Confidence 45555443 22 23478899999999999987643
No 280
>PRK11460 putative hydrolase; Provisional
Probab=20.64 E-value=4.7e+02 Score=21.86 Aligned_cols=42 Identities=7% Similarity=-0.041 Sum_probs=24.4
Q ss_pred CCCcEEEEeCCCCCCCcchhhhHHHHHHHHHcCCeEEEEcccc
Q 025941 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEHRY 138 (246)
Q Consensus 96 ~~~pI~l~~Gg~~~~~~~~~~~g~~~~~a~~~g~~vv~~d~Rg 138 (246)
.+.||+++||.....-.... ...+.+..++.|..+-...+.+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~-~~~~~~~L~~~g~~~~~~~~~~ 188 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAH-AVAAQEALISLGGDVTLDIVED 188 (232)
T ss_pred CCCcEEEEecCCCCccCHHH-HHHHHHHHHHCCCCeEEEEECC
Confidence 35799999988777654332 2233444455566655554443
No 281
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=20.64 E-value=1.1e+02 Score=28.00 Aligned_cols=23 Identities=35% Similarity=0.440 Sum_probs=20.2
Q ss_pred CEEEEecChHHHHHHHHHHHCCC
Q 025941 187 PVIVIGGSYGGMLAAWFRLKYPH 209 (246)
Q Consensus 187 pvil~G~S~GG~laa~~~~~yP~ 209 (246)
+|+++|++.+|..++....+.++
T Consensus 2 ~V~IiGgGiaGla~A~~L~~~g~ 24 (414)
T TIGR03219 2 RVAIIGGGIAGVALALNLCKHSH 24 (414)
T ss_pred eEEEECCCHHHHHHHHHHHhcCC
Confidence 58999999999999999888654
No 282
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=20.24 E-value=3e+02 Score=22.78 Aligned_cols=29 Identities=10% Similarity=0.267 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe
Q 025941 162 NSAQAITDYAEILLYIKEKYNARHSPVIVIG 192 (246)
Q Consensus 162 t~~q~l~D~a~~i~~l~~~~~~~~~pvil~G 192 (246)
+.++..+-+..|++.+++.. ++.|++++-
T Consensus 72 ~~~~~~~~~~~fv~~iR~~h--P~tPIllv~ 100 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAH--PDTPILLVS 100 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT---SSS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhC--CCCCEEEEe
Confidence 44555666777777777654 567787775
No 283
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=20.18 E-value=53 Score=28.22 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=14.6
Q ss_pred CCEEEEecChHHHHHHHHH
Q 025941 186 SPVIVIGGSYGGMLAAWFR 204 (246)
Q Consensus 186 ~pvil~G~S~GG~laa~~~ 204 (246)
..++++|||+|..=..++.
T Consensus 235 ~~I~i~GhSl~~~D~~Yf~ 253 (270)
T PF14253_consen 235 DEIIIYGHSLGEVDYPYFE 253 (270)
T ss_pred CEEEEEeCCCchhhHHHHH
Confidence 4699999999986555554
Done!