Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>025946
MTTLIQFSINLSALYTIQSNFGKNRTSCYSLTRPKIGSFQGNSCKLRAFGDQRQKLCFFE
RGKDGILVKEEGLKNKKKRVVLVRFNEDFGFNGGGGGGGNNSNNARILGNLALAIGLTYF
SMTGQLGWVLDAIVSIWLLAVIVPIVGFGAFLWWASRDIVQDSCPNCGNDFQIFKSTLND
ELQLCPYCSQPFSVVDDKFVRESVRFSNESTTFGQAFSDFFPGSRKGRESSTSVVDVEAE
IKDAD

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025946
        (245 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2131699 - symbol:AT4G27390 "AT4G27390" species...   571  2.3e-55   1


>TAIR|locus:2131699 [details] [associations]
            symbol:AT4G27390 "AT4G27390" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR
            UniGene:At.2347 UniGene:At.23474 EMBL:AY037265 EMBL:AF386939
            EMBL:AY052205 EMBL:AY060494 IPI:IPI00538964 RefSeq:NP_567772.1
            STRING:Q93VI9 PRIDE:Q93VI9 EnsemblPlants:AT4G27390.1 GeneID:828847
            KEGG:ath:AT4G27390 TAIR:At4g27390 HOGENOM:HOG000151142
            InParanoid:Q93VI9 OMA:CTQPFSV PhylomeDB:Q93VI9
            ProtClustDB:CLSN2689639 Genevestigator:Q93VI9 Uniprot:Q93VI9
        Length = 235

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 101/140 (72%), Positives = 122/140 (87%)

Query:   106 RILGNLALAIGLTYFSMTGQLGWVLDAIVSIWLLAVIVPIVGFGAFLWWASRDIVQDSCP 165
             RILGNLALAIGLTY SMTGQLGW+LDAIVS+WL+ VIVPI+G GAF WWA RDIVQ +CP
Sbjct:    96 RILGNLALAIGLTYLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQRDIVQSNCP 155

Query:   166 NCGNDFQIFKSTLNDELQLCPYCSQPFSVVDDKFVRESVRFSNESTTFGQAFSDFFPGSR 225
             NCGN+FQIFKS ++DE+QLCP+C+QPFSVVDDKFV+E V+FSN++T FGQ  + F    +
Sbjct:   156 NCGNEFQIFKSAMDDEVQLCPFCTQPFSVVDDKFVKEPVKFSNQTTAFGQDLNGFSSKPK 215

Query:   226 KGRESSTSVVDVEAEIKDAD 245
             KG+ SST+VVD+EAE+ DAD
Sbjct:   216 KGKGSSTAVVDIEAEVTDAD 235


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      245       217   0.00090  112 3  11 22  0.48    32
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  175 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.51u 0.10s 17.61t   Elapsed:  00:00:01
  Total cpu time:  17.51u 0.10s 17.61t   Elapsed:  00:00:01
  Start:  Sat May 11 09:50:01 2013   End:  Sat May 11 09:50:02 2013

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