Query 025947
Match_columns 245
No_of_seqs 109 out of 317
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 21:16:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025947.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025947hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wina_ d.43.2.1 (A:) Flotilli 77.8 7.7 0.00056 28.5 9.3 88 125-217 22-119 (143)
2 d2nsza1 a.118.1.14 (A:322-450) 23.7 29 0.0021 25.1 3.3 27 162-188 4-30 (129)
3 d1k8qa_ c.69.1.6 (A:) Gastric 16.9 37 0.0027 26.0 2.8 25 113-138 19-43 (377)
4 d1pzqa_ a.34.3.1 (A:) Erythron 14.9 7.5 0.00054 25.3 -1.7 23 98-120 25-47 (60)
5 d1gdta1 a.4.1.2 (A:141-183) ga 14.5 17 0.0013 22.4 0.1 18 219-236 2-19 (43)
6 d2ok3a1 b.62.1.1 (A:1-159) Cyc 10.3 55 0.004 23.9 1.8 17 205-221 142-158 (159)
7 d1ug3a1 a.118.1.14 (A:1235-142 10.2 1.3E+02 0.0094 22.6 4.1 27 162-188 7-33 (193)
8 d1ylfa1 a.4.5.55 (A:5-142) Hyp 10.2 1.4E+02 0.011 20.7 4.2 30 159-188 107-136 (138)
9 d2pv2a1 d.26.1.1 (A:172-274) P 8.1 2.8E+02 0.02 18.0 6.1 36 156-191 16-51 (103)
10 d1a6qa1 a.159.1.1 (A:297-368) 8.1 81 0.0059 21.0 1.8 32 162-193 14-46 (72)
No 1
>d1wina_ d.43.2.1 (A:) Flotillin-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.82 E-value=7.7 Score=28.51 Aligned_cols=88 Identities=10% Similarity=0.129 Sum_probs=54.7
Q ss_pred EEEEeCCCcEEEEEEEEEeeecCCcccccchhhh----hhh----HHHHHHHHHHHHHHHhhCCHHHHHHH--HccchHH
Q 025947 125 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQA----SQI----RQIRRKMREIMIAQAASCDLKGLVEK--FIAEIIG 194 (245)
Q Consensus 125 vdvkT~DGy~lRvf~i~fT~kr~~q~kkt~Ya~~----sQ~----~~IRk~m~eii~~~~~~~~l~e~V~~--li~~~i~ 194 (245)
-+|.|+||-.|.|-+++.-+-.. ..+-..||-. .++ ..|+..+...+.+.+...+++|++.. -+.+.+.
T Consensus 22 q~v~TkD~v~v~V~a~v~~rV~~-~~~~~~~a~~~~l~~~~~~~~~~i~~~~~~~lR~vig~~~l~el~~~R~~i~~~v~ 100 (143)
T d1wina_ 22 EDVETAEGVALTVTGVAQVKIMT-EKELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVR 100 (143)
T ss_dssp EEEECSSSCEEEECCEEEEEECC-CSSCCHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHTHHHHHHHHH
T ss_pred ceEECCCCCEEEEEEEEEEEEcC-cHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhccccHHHHHhCHHHHHHHHH
Confidence 35889999999997766554322 2222233311 122 45677777778999999999999854 4555555
Q ss_pred HHHHHhcccccccccEEEEEEEe
Q 025947 195 REIEKATLSIYPLQNVFIRKVKI 217 (245)
Q Consensus 195 keI~k~~k~IyPl~~V~IrKvKv 217 (245)
.+|.+...+. -++|.-+.+
T Consensus 101 ~~i~~~l~~~----Gi~v~~v~I 119 (143)
T d1wina_ 101 EVAAPDVGRM----GIEILSFTI 119 (143)
T ss_dssp HHHHHHHTTT----TEEEEEEEC
T ss_pred HHHHHHHHHh----CeEEEEEEE
Confidence 5555555543 355555544
No 2
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.67 E-value=29 Score=25.13 Aligned_cols=27 Identities=7% Similarity=0.117 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 025947 162 RQIRRKMREIMIAQAASCDLKGLVEKF 188 (245)
Q Consensus 162 ~~IRk~m~eii~~~~~~~~l~e~V~~l 188 (245)
+.++++|..++.+.....|++|++.-+
T Consensus 4 ~~l~kk~~~ll~EY~~~~D~~Ea~~~l 30 (129)
T d2nsza1 4 NHLVKEIDMLLKEYLLSGDISEAEHCL 30 (129)
T ss_dssp CHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 468999999999999999999987554
No 3
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}
Probab=16.90 E-value=37 Score=25.99 Aligned_cols=25 Identities=32% Similarity=0.573 Sum_probs=17.0
Q ss_pred hccceeeeEEEEEEEEeCCCcEEEEE
Q 025947 113 LVRKWHTLIEAYVDVKTTDNYTLRMF 138 (245)
Q Consensus 113 lVrK~~s~Ie~~vdvkT~DGy~lRvf 138 (245)
+|+.|.=-.|.+ .|+|.||+.|+++
T Consensus 19 ~~~~~~y~~e~h-~v~t~DG~~l~~~ 43 (377)
T d1k8qa_ 19 MITYWGYPAEEY-EVVTEDGYILGID 43 (377)
T ss_dssp HHHHTTCCCEEE-EEECTTSEEEEEE
T ss_pred HHHHcCCCceEE-EEEcCCCCEEEEE
Confidence 344444345654 6899999999876
No 4
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=14.93 E-value=7.5 Score=25.34 Aligned_cols=23 Identities=30% Similarity=0.502 Sum_probs=17.2
Q ss_pred eeeecccccchhhhhhccceeee
Q 025947 98 TNFWGMDFTTDKLRSLVRKWHTL 120 (245)
Q Consensus 98 T~F~GmelT~DklrSlVrK~~s~ 120 (245)
..=.||+----.|.||.|||+|+
T Consensus 25 ~~~~gh~dvg~rle~llrrw~sr 47 (60)
T d1pzqa_ 25 SAEDGHDDVGQRLESLLRRWNSR 47 (60)
T ss_dssp TTSSCCHHHHHHHHHHHHHHHHH
T ss_pred chhhcccHHHHHHHHHHHHHhcc
Confidence 33456666667889999999975
No 5
>d1gdta1 a.4.1.2 (A:141-183) gamma,delta resolvase (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=14.54 E-value=17 Score=22.36 Aligned_cols=18 Identities=17% Similarity=0.205 Sum_probs=15.6
Q ss_pred ecCccchhhhhhcCCcce
Q 025947 219 KAPKFDLGKLMEVCPVFL 236 (245)
Q Consensus 219 k~Pk~~~~kl~e~~~~~~ 236 (245)
.+|.+|..+..+||.+|+
T Consensus 2 Rk~~Id~~~V~~L~~~G~ 19 (43)
T d1gdta1 2 RKRKIDRDAVLNMWQQGL 19 (43)
T ss_dssp SCCCSCHHHHHHHHHTTC
T ss_pred CCCccCHHHHHHHHHcCC
Confidence 368899999999999886
No 6
>d2ok3a1 b.62.1.1 (A:1-159) Cyclophilin-like protein PPIL3B {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.35 E-value=55 Score=23.89 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=15.5
Q ss_pred cccccEEEEEEEeeecC
Q 025947 205 YPLQNVFIRKVKILKAP 221 (245)
Q Consensus 205 yPl~~V~IrKvKvlk~P 221 (245)
-|+++|.|.++.||..|
T Consensus 142 ~P~~~i~I~~v~i~~~P 158 (159)
T d2ok3a1 142 RPLNDVHIKDITIHANP 158 (159)
T ss_dssp CBSSCCBEEEEEEECCS
T ss_pred CcCCCcEEEEEEEEeCC
Confidence 39999999999999888
No 7
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.17 E-value=1.3e+02 Score=22.62 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 025947 162 RQIRRKMREIMIAQAASCDLKGLVEKF 188 (245)
Q Consensus 162 ~~IRk~m~eii~~~~~~~~l~e~V~~l 188 (245)
..+++++..+|.+.....|++|++.-+
T Consensus 7 ee~~kk~~~il~Ey~~~~D~~Ea~~~l 33 (193)
T d1ug3a1 7 EELEKKSKAIIEEYLHLNDMKEAVQCV 33 (193)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 467889999999999999999998765
No 8
>d1ylfa1 a.4.5.55 (A:5-142) Hypothetical protein BC1842 {Bacillus cereus [TaxId: 1396]}
Probab=10.16 E-value=1.4e+02 Score=20.74 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 025947 159 SQIRQIRRKMREIMIAQAASCDLKGLVEKF 188 (245)
Q Consensus 159 sQ~~~IRk~m~eii~~~~~~~~l~e~V~~l 188 (245)
..++.+...+.+.+.+.+.+.+|.++++++
T Consensus 107 c~l~~~~~~~~~~~~~~L~~~Tl~dL~~~~ 136 (138)
T d1ylfa1 107 AVLEIILIQAQSAMEEVLRNITMGQLFETL 136 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHHHHHh
Confidence 457888888899999999999999999874
No 9
>d2pv2a1 d.26.1.1 (A:172-274) Porin chaperone SurA, PPIase domains {Escherichia coli [TaxId: 562]}
Probab=8.14 E-value=2.8e+02 Score=18.05 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=29.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhCCHHHHHHHHccc
Q 025947 156 AQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAE 191 (245)
Q Consensus 156 a~~sQ~~~IRk~m~eii~~~~~~~~l~e~V~~li~~ 191 (245)
+...++....+.+.+++.+.-...+|.+++++...+
T Consensus 16 ~~~~~~~~~~~~a~~~~~~l~~g~~F~~la~~~S~~ 51 (103)
T d2pv2a1 16 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSAD 51 (103)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCHHHHhcccccc
Confidence 456677788889999998888889999999887443
No 10
>d1a6qa1 a.159.1.1 (A:297-368) Protein serine/threonine phosphatase 2C, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.12 E-value=81 Score=21.01 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHhhC-CHHHHHHHHccchH
Q 025947 162 RQIRRKMREIMIAQAASC-DLKGLVEKFIAEII 193 (245)
Q Consensus 162 ~~IRk~m~eii~~~~~~~-~l~e~V~~li~~~i 193 (245)
+.|.+++.|+|.+..... +|..+++.|.+++|
T Consensus 14 ~~Le~~v~eii~~~~~~~~dl~~Vm~~L~~e~I 46 (72)
T d1a6qa1 14 KYLECRVEEIIKKQGEGVPDLVHVMRTLASENI 46 (72)
T ss_dssp HHHHHHHHHHCC----CCCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcccCCchHHHHHHHHHhcCC
Confidence 467888889988876554 68888888765443
Done!