Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>025951
MKMEVQSVCRGLQLPKFKSSNCGFLSHQFVSPSASQFGSRSQSIRFGNAYKFLGNTFPNL
KHKIEGYSAWSSKRGAILCASNSGSDTKLGFPSGENSSLPVAIFNGPEPFRGKSGSVSFC
GLTHQLVEEGKLMSAPFQEDKGSFLWILAPVVLISSLILPQMFLGNVIEDFIKDNLLMEA
IFTIQPKEVGSYHRAQGILDFCFLHDGLKGCCPSLCRLCNLACASTASLGCSASISGWLC
GSTCI

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025951
        (245 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2198070 - symbol:AT1G48460 "AT1G48460" species...   281  2.0e-28   2


>TAIR|locus:2198070 [details] [associations]
            symbol:AT1G48460 "AT1G48460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009536 "plastid" evidence=IDA] EMBL:CP002684 GO:GO:0009941
            EMBL:BT020308 EMBL:BT020516 IPI:IPI00533239 RefSeq:NP_175279.1
            UniGene:At.38414 STRING:Q5PNY9 PaxDb:Q5PNY9 PRIDE:Q5PNY9
            EnsemblPlants:AT1G48460.1 GeneID:841267 KEGG:ath:AT1G48460
            TAIR:At1g48460 eggNOG:NOG270538 InParanoid:Q5PNY9 OMA:RGSSCWP
            PhylomeDB:Q5PNY9 ProtClustDB:CLSN2682225 Genevestigator:Q5PNY9
            Uniprot:Q5PNY9
        Length = 340

 Score = 281 (104.0 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 67/132 (50%), Positives = 86/132 (65%)

Query:    55 NTFPNLKHKIEGYSA--WSS---KRGAILCASNSGSDTKLGFPSGENSSLPVAIFNGPEP 109
             +TF   +HK++      W+     R  + C+S S SD++      + S+   A     E 
Sbjct:    33 STFAT-RHKLDSRQTLLWNKPQLSRVRVACSS-SQSDSRPEKKQSDKSNYARA-----EL 85

Query:   110 FRGKSGSVSFCGLTHQLVEEGKLMSAPFQEDKGSFLWILAPVVLISSLILPQMFLGNVIE 169
             FRGKSGSVSF GLTHQLVEE KL+SAPFQE+KGSFLW+LAPVVLISSLILPQ FL  +IE
Sbjct:    86 FRGKSGSVSFNGLTHQLVEESKLVSAPFQEEKGSFLWVLAPVVLISSLILPQFFLSGIIE 145

Query:   170 DFIKDNLLMEAI 181
                K++ + E +
Sbjct:   146 ATFKNDTVAEIV 157

 Score = 51 (23.0 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query:     3 MEVQSVCRGLQLPKFKSSNCGFLSHQFVSPSASQFGSR 40
             ME +++C G   P+ + S+   LS     P++S F +R
Sbjct:     1 MESKAICLGFLPPRLRFSSPRLLSLPPSPPASSTFATR 38


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      245       245   0.00099  113 3  11 22  0.40    33
                                                     32  0.45    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  200 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.26u 0.15s 20.41t   Elapsed:  00:00:01
  Total cpu time:  20.26u 0.15s 20.41t   Elapsed:  00:00:01
  Start:  Sat May 11 09:57:13 2013   End:  Sat May 11 09:57:14 2013

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