BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025952
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum
lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/246 (83%), Positives = 219/246 (89%), Gaps = 2/246 (0%)
Query: 1 MASNTLMSCGIATTAFPSVLSSSKSKFFTAVSL-PAAANATSKYAMSADWMPGEPRPPYL 59
MASNTLMSCGI PS LSS+KSKF A+ + A N S+++MSADWMPG+PRP YL
Sbjct: 1 MASNTLMSCGIPAVC-PSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYL 59
Query: 60 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 119
DGSAPGDFGFD L LGEVP NLERYKESELIHCRWAMLAVPGI+VPEALGLGNWV+AQEW
Sbjct: 60 DGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 119
Query: 120 AAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFS 179
AA+PGGQATYLG PVPWGTLPTIL IEFL+IAFVEHQRSMEKD EKKKYPGGAFDPLG+S
Sbjct: 120 AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 179
Query: 180 KDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVII 239
KDP KFEE KVKEIKNGRLALLA VGFCVQQSAY GTGPLENLATHLADPWHNNIGDVII
Sbjct: 180 KDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDVII 239
Query: 240 PRGIVP 245
P+GI P
Sbjct: 240 PKGIFP 245
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis
thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/241 (85%), Positives = 219/241 (90%), Gaps = 3/241 (1%)
Query: 1 MASNTLMSCGIATTAFPSVLSSSKSKFFTA-VSLPAAANATSKYAMSADWMPGEPRPPYL 59
MASN+LMSCGIA +PS+LSSSKSKF +A V LP A N + M+A WMPGEPRP YL
Sbjct: 1 MASNSLMSCGIAAV-YPSLLSSSKSKFVSAGVPLPNAGN-VGRIRMAAHWMPGEPRPAYL 58
Query: 60 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 119
DGSAPGDFGFDPL LGEVP NLERYKESELIHCRWAMLAVPGILVPEALG GNWV+AQEW
Sbjct: 59 DGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEW 118
Query: 120 AAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFS 179
AA+PGGQATYLG PVPWGTLPTIL IEFL+IAFVEHQRSMEKDPEKKKYPGGAFDPLG+S
Sbjct: 119 AALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 178
Query: 180 KDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVII 239
KDP+K EE KVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++I
Sbjct: 179 KDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVI 238
Query: 240 P 240
P
Sbjct: 239 P 239
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum
vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/242 (73%), Positives = 201/242 (83%), Gaps = 2/242 (0%)
Query: 2 ASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADWMPGEPRPPYLDG 61
+S+ L SC + PS+L+ S + + A A + + MSA+W PG+PRP +LDG
Sbjct: 3 SSSGLRSC--SAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDG 60
Query: 62 SAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAA 121
S+PGDFGFDPL L VPEN ER+KESE+ HCRWAML VPG+LVPEALGLGNWV+AQEWAA
Sbjct: 61 SSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAA 120
Query: 122 VPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKD 181
+P GQATYLG PVPWG LPTIL IEFL+IAF E QR+MEKDPEKKKYPGGAFDPLGFSKD
Sbjct: 121 LPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKD 180
Query: 182 PQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIPR 241
P KFEE K+KEIKNGRLA+LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++IPR
Sbjct: 181 PAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPR 240
Query: 242 GI 243
I
Sbjct: 241 NI 242
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Length = 287
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 133/266 (50%), Gaps = 53/266 (19%)
Query: 22 SSKSKFFTAVSLPAAANATSKYAMSAD-----WMPGEPRPPYLDGSAPGDFGFDPLRLGE 76
SS S FTA A+ K A + W PG P YLDGS GD+GFDP LG+
Sbjct: 23 SSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGK 82
Query: 77 VPE-------------------------------------------NLERYKESELIHCR 93
E L+R++E ELIH R
Sbjct: 83 PAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGR 142
Query: 94 WAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFV 153
WAMLA G + E L W A + V G ++YLG P+P+ ++ T++ IE L I ++
Sbjct: 143 WAMLATLGAITVEWLTGVTWQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVLVIGYI 199
Query: 154 EHQRSMEKDPEKKKYPGGAF-DPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSA 212
E QR+ E D EK+ YPGG F DPLG + DP K + ++ EIK+ RLA++ F+GF VQ +A
Sbjct: 200 EFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAA 259
Query: 213 YPGTGPLENLATHLADPWHNNIGDVI 238
G GPL N ATHL+DP H I D
Sbjct: 260 -TGKGPLNNWATHLSDPLHTTIIDTF 284
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 130/243 (53%), Gaps = 35/243 (14%)
Query: 14 TAFPSVLSSSKSKF-----FTAVSLPAAANATSKYAMSADWMPGEPRPPYLDGSAPGDFG 68
T+ P L+ S + FT++ A ++ A +W+PG P YL GS GD G
Sbjct: 17 TSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNG 76
Query: 69 FDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQAT 128
FDPL L E PENL+ + ++EL++ RWAML V G+L+PE + EW G+
Sbjct: 77 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEW--YDAGKEQ 134
Query: 129 YLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDPEKKK---------YPGG 171
Y + T+ VIEF+ +VE +R S+ +DP K+ YPGG
Sbjct: 135 YFASS------STLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGG 188
Query: 172 AFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWH 231
F+PL F+ +E K KE+ NGRLA+LAF+GF VQ + G GP ENL HL+DPWH
Sbjct: 189 IFNPLNFAPT----QEAKEKELANGRLAMLAFLGFVVQHNV-TGKGPFENLLQHLSDPWH 243
Query: 232 NNI 234
N I
Sbjct: 244 NTI 246
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Length = 290
Score = 154 bits (388), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 124/234 (52%), Gaps = 48/234 (20%)
Query: 49 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLE-------------------------- 82
W PG P +LDGS GD+GFDP LG+ E L+
Sbjct: 58 WYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAA 117
Query: 83 -----------------RYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGG 125
R++E ELIH RWAMLA G L E L W A + V G
Sbjct: 118 DAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDG- 176
Query: 126 QATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAF-DPLGFSKDPQK 184
++YLG P+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG F DPLG + DP+K
Sbjct: 177 -SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEK 234
Query: 185 FEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVI 238
+ ++ EIK+ RLA++AF+GF VQ +A G GPL N ATHL+DP H I D
Sbjct: 235 TAQLQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIIDTF 287
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 128/255 (50%), Gaps = 40/255 (15%)
Query: 18 SVLSSSKSKFFTAVSLPAAANATSKYAMSAD------------WMPGEPRPPYLDGSAPG 65
S++ ++K+ F L + +T+ A SA W PG PP+LDGS PG
Sbjct: 25 SIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPG 84
Query: 66 DFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGG 125
DFGFDPL L PE+L +++EL+HCRWAML GI +PE L + W G
Sbjct: 85 DFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTA-GE 143
Query: 126 QATYLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDP---------EKKKY 168
Q + T T+ ++E + I + E +R + DP Y
Sbjct: 144 QEYFTDT-------TTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGY 196
Query: 169 PGGA-FDPLGF-SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL 226
PGG FDPLG+ S P K +E + KEIKNGRLA+LA +G Q Y GTGP++NL HL
Sbjct: 197 PGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLFAHL 255
Query: 227 ADPWHNNIGDVIIPR 241
ADP H I P+
Sbjct: 256 ADPGHATIFAAFSPK 270
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 131/247 (53%), Gaps = 38/247 (15%)
Query: 9 CGIATTAFPSVLSSSKSKFFTAVSL-PAAANATSKYAMSA---DWMPGEPRPPYLDGSAP 64
CG+ + L S K V+ P + ++ + + A +W+PG P YL GS P
Sbjct: 16 CGLKS----RFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLP 71
Query: 65 GDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPG 124
GD GFDPL L E PENL + ++EL++ RWAML V G+L+PE + +W A
Sbjct: 72 GDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAA-- 129
Query: 125 GQATYLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDPEKKK--------- 167
G+ Y + T+ VIEF+ +VE +R S+ +DP K+
Sbjct: 130 GKEEYFASS------STLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVG 183
Query: 168 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 227
YPGG F+PL F+ E K KEI NGRLA+LAF+GF +Q + G GP +NL H++
Sbjct: 184 YPGGIFNPLNFAPT----LEAKEKEIANGRLAMLAFLGFIIQHNV-TGKGPFDNLLQHIS 238
Query: 228 DPWHNNI 234
DPWHN I
Sbjct: 239 DPWHNTI 245
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 111/199 (55%), Gaps = 15/199 (7%)
Query: 49 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL 108
W+PG P YLDGS GD GFDPL L E PE+L + ++++++ RWAML V G+L+PE L
Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKK- 167
+ A EW +PG + + + + +E +++ S+ +DP K
Sbjct: 96 TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPIFKSY 155
Query: 168 --------YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL 219
YPG F+PL F+ E K KE+ NGRLA+LAF+GF VQ + + G GP
Sbjct: 156 SLPPHECGYPGRVFNPLNFAP-----LENKEKELANGRLAMLAFLGFLVQHNVH-GKGPF 209
Query: 220 ENLATHLADPWHNNIGDVI 238
ENL HLADPWHN I I
Sbjct: 210 ENLQQHLADPWHNTIIQTI 228
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 143 bits (361), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 129/255 (50%), Gaps = 40/255 (15%)
Query: 18 SVLSSSKSKFFTAVSL-------PAAANATSKYAMSAD-----WMPGEPRPPYLDGSAPG 65
S++ ++K+ F L P + + + A++AD W PG P +LDGS PG
Sbjct: 25 SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPG 84
Query: 66 DFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGG 125
DFGFDPL LG PE+L+ ++EL+H RWAML GI +PE L + W G
Sbjct: 85 DFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTA-GE 143
Query: 126 QATYLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDP---------EKKKY 168
Q + T T+ VIE + I + E +R + DP Y
Sbjct: 144 QEYFTDT-------TTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGY 196
Query: 169 PGGA-FDPLGF-SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL 226
PGG FDPLG+ S P K +E + KEIKNGRLA+LA +G Q Y GTGP++NL HL
Sbjct: 197 PGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLFAHL 255
Query: 227 ADPWHNNIGDVIIPR 241
ADP H I P+
Sbjct: 256 ADPGHATIFAAFSPK 270
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 108/195 (55%), Gaps = 16/195 (8%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--- 108
GEP P YL G PGD+G+D L PE R +E E+IHCRWAML G + PE L
Sbjct: 63 GEP-PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 121
Query: 109 ----GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKD 162
G W +A GG YLG P V ++ I + + + VE R +
Sbjct: 122 GVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 180
Query: 163 P----EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGP 218
P E YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 239
Query: 219 LENLATHLADPWHNN 233
LENLA HLADP +NN
Sbjct: 240 LENLADHLADPVNNN 254
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 108/190 (56%), Gaps = 8/190 (4%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGL--GNW 113
P YL+G GD+G+DP LG+ PEN +Y+ ELIH RWAML G ++PEAL N
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141
Query: 114 VQAQEW-----AAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKY 168
W + G Y G +P + ++ L ++ + D E K +
Sbjct: 142 GPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLH 201
Query: 169 PGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLAD 228
PGG FDPLG +KDP++ KVKEIKNGRLA+ A +GF + Q+ G GP+ENLA HL+D
Sbjct: 202 PGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFI-QAYVTGEGPVENLAKHLSD 260
Query: 229 PWHNNIGDVI 238
P+ NN+ VI
Sbjct: 261 PFGNNLLTVI 270
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 109/197 (55%), Gaps = 21/197 (10%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--- 108
GEP P YL G PGD+G+D L PEN + +E E+IHCRWAML G + PE L
Sbjct: 72 GEP-PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARN 130
Query: 109 ----GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR----- 157
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 131 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGP 189
Query: 158 -SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 216
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G
Sbjct: 190 LGEVTDP---IYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 245
Query: 217 GPLENLATHLADPWHNN 233
GP+ENLA HLADP +NN
Sbjct: 246 GPIENLADHLADPVNNN 262
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1
Length = 276
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 116/219 (52%), Gaps = 47/219 (21%)
Query: 49 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLE-------------------------- 82
W PG P +LDGS GD GFDP LG+ E L+
Sbjct: 59 WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118
Query: 83 -----------------RYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGG 125
R++E ELIH RWAML G + EAL W A + V G
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 177
Query: 126 QATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPQKF 185
++YLG P+P+ +L T++ IE L + ++E QR+ E DPEK+ YPGG FDPLG + DP+K
Sbjct: 178 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKL 235
Query: 186 EEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAT 224
+ K+ EIK+ RLA++AF+ F + Q+A+ G GP+ LAT
Sbjct: 236 DTLKLAEIKHSRLAMVAFLIFAL-QAAFTGKGPVSFLAT 273
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 137 bits (346), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 104/193 (53%), Gaps = 14/193 (7%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 108
E P YL G PGD+G+D L PE R +E E+IHCRWAML G + PE L
Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 109 ---GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 161
G W +A GG YLG P + ++ I + + + FVE R
Sbjct: 123 VTFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPL 181
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 182 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 221 NLATHLADPWHNN 233
NL H+ADP NN
Sbjct: 241 NLYDHVADPVANN 253
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 137 bits (345), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 108
E P YL G PGD+G+D L PE R +E E+IHCRWAML G + PE L
Sbjct: 35 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 94
Query: 109 ---GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 161
G W +A GG YLG P + ++ I + + + FVE R
Sbjct: 95 VTFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPL 153
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 154 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 212
Query: 221 NLATHLADPWHNN 233
NL+ H+ADP NN
Sbjct: 213 NLSDHIADPVANN 225
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 137 bits (344), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 104/193 (53%), Gaps = 14/193 (7%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 108
E P YL G PGD+G+D L PE R +E E+IHCRWAML G + PE L
Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 109 ---GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 161
G W +A GG YLG P V ++ I + + + FVE R
Sbjct: 123 VKFGEAVWFKAGSQIFSEGG-LDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPL 181
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 182 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 221 NLATHLADPWHNN 233
NL+ H+ DP NN
Sbjct: 241 NLSDHINDPVANN 253
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 127/258 (49%), Gaps = 32/258 (12%)
Query: 2 ASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADW-----------M 50
AS T +S A A SSS+ V++ AN + + W
Sbjct: 3 ASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPF 62
Query: 51 PGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-- 108
GE P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 63 SGE-SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 109 -----GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK 161
G W +A GG YLG P V ++ I + + + VE R +
Sbjct: 122 NGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGE 180
Query: 162 ------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPG 215
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G
Sbjct: 181 PLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QALVTG 236
Query: 216 TGPLENLATHLADPWHNN 233
GPLENLA HLADP +NN
Sbjct: 237 KGPLENLADHLADPVNNN 254
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 103/191 (53%), Gaps = 15/191 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE R +E E+IH RWAML G + PE L
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP--- 163
G W +A GG YLG P V ++ I + + + VE R P
Sbjct: 127 GEAVWFKAGSQIFSDGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 164 -EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 222
E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENL 244
Query: 223 ATHLADPWHNN 233
A HLADP +NN
Sbjct: 245 ADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 103/191 (53%), Gaps = 15/191 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE R +E E+IH RWAML G + PE L
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP--- 163
G W +A GG YLG P V ++ I + + + VE R P
Sbjct: 127 GEAVWFKAGSQIFSDGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 164 -EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 222
E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENL 244
Query: 223 ATHLADPWHNN 233
A HLADP +NN
Sbjct: 245 ADHLADPVNNN 255
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 108/199 (54%), Gaps = 21/199 (10%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL- 108
+ GEP P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 62 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 109 ------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 160
G W +A GG YLG P V +L I + + + VE R
Sbjct: 121 RNGVKFGEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG 179
Query: 161 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 214
DP YPGG+FDPLG ++ PQ F E KVKEIKNGRLA+ + GF V Q+
Sbjct: 180 GPLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFV-QAIVT 235
Query: 215 GTGPLENLATHLADPWHNN 233
G GPLE+LA H+ADP +NN
Sbjct: 236 GKGPLEDLADHIADPVNNN 254
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 103/191 (53%), Gaps = 15/191 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE R +E E+IH RWAML G + PE L
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP--- 163
G W +A GG YLG P V ++ I + + + VE R P
Sbjct: 127 GEAVWFKAGSQIFSDGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 164 -EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 222
E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENL 244
Query: 223 ATHLADPWHNN 233
A HLADP +NN
Sbjct: 245 ADHLADPVNNN 255
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 106/193 (54%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQ 115
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L N V+
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVK 126
Query: 116 AQEWAAVPGGQAT-------YLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
E GG YLG P V ++ I + + + VE R +
Sbjct: 127 FGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEV 186
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 104/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 68 PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 127 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 185
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 186 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 241
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 242 NLADHLADPVNNN 254
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 126 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 184
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 185 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 240
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 241 NLADHLADPVNNN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 126 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 184
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 185 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 240
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 241 NLADHLADPVNNN 253
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 104/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 186
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 108/199 (54%), Gaps = 21/199 (10%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL- 108
+ GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 61 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 109 ------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 160
G W +A GG YLG P + ++ I ++ + + VE R
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 161 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 214
DP YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+
Sbjct: 179 GPLGEVVDP---LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVT 234
Query: 215 GTGPLENLATHLADPWHNN 233
G GPLENLA HLADP +NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 104/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 186
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPE-------AL 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKF 126
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 127 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 185
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 186 IDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 241
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 242 NLADHLADPVNNN 254
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 108
E P YL G PGD+G+D L PE R +E E+IHCRWAML G + PE L
Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 109 ---GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 161
G W +A GG YLG P + ++ + + + + +E R
Sbjct: 123 VKFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPL 181
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 182 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 221 NLATHLADPWHNN 233
NL H+ADP NN
Sbjct: 241 NLFDHVADPVANN 253
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 104/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVK IKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 108/199 (54%), Gaps = 21/199 (10%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL- 108
+ GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 57 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 109 ------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 160
G W +A GG YLG P + ++ I ++ + + VE R
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 174
Query: 161 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 214
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+
Sbjct: 175 GPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVT 230
Query: 215 GTGPLENLATHLADPWHNN 233
G GPLENLA HLADP +NN
Sbjct: 231 GKGPLENLADHLADPVNNN 249
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 102/193 (52%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SME 160
G W +A GG YLG P + ++ I + + + FVE R
Sbjct: 126 GEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEG 184
Query: 161 KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGGAFDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 185 LDP---IYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 221 NLATHLADPWHNN 233
NL HLADP NN
Sbjct: 241 NLFDHLADPVANN 253
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 104/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPE-------AL 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SME 160
G W++A GG YLG P V ++ I + L + VE R +
Sbjct: 128 GEAVWLKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVV 186
Query: 161 KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVKE KNGRLA+ + GF + Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFI-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HL DP +NN
Sbjct: 243 NLADHLVDPVNNN 255
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 108
E P YL G PGD+G+D L PE R +E E+IH RWAML G + PE L
Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNG 120
Query: 109 ---GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 161
G W +A GG YLG P V ++ I ++ + + FVE R
Sbjct: 121 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPL 179
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
+ K YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G GP+E
Sbjct: 180 GEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 238
Query: 221 NLATHLADPWHNN 233
NL H+ADP NN
Sbjct: 239 NLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 108
E P YL G PGD+G+D L PE R +E E+IH RWAML G + PE L
Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNG 120
Query: 109 ---GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 161
G W +A GG YLG P V ++ I ++ + + FVE R
Sbjct: 121 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPL 179
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
+ K YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G GP+E
Sbjct: 180 GEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 238
Query: 221 NLATHLADPWHNN 233
NL H+ADP NN
Sbjct: 239 NLFDHVADPVANN 251
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 108/199 (54%), Gaps = 21/199 (10%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL- 108
+ GEP P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 61 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119
Query: 109 ------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 160
G W +A GG YLG P + ++ I + + + VE R
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 178
Query: 161 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 214
DP YPGG+FDPLG + DP+ F E KVKE+K GRLA+L+ GF V Q+
Sbjct: 179 GPLGEVVDP---LYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFV-QAIVT 234
Query: 215 GTGPLENLATHLADPWHNN 233
G GPLENLA H+ADP +NN
Sbjct: 235 GKGPLENLADHIADPVNNN 253
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPE-------AL 108
P YL G P D+G+D L PE + +E E+IHCRWAML G + PE
Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGAQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 IDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME------ 160
G W +A GG YLG P V ++ I + + + +E R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEV 186
Query: 161 KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPL+
Sbjct: 187 TDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLD 242
Query: 221 NLATHLADPWHNN 233
NL HLADP +NN
Sbjct: 243 NLVDHLADPVNNN 255
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE ++Y+E E+IH RWA+L GIL PE L
Sbjct: 56 PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVK 115
Query: 109 -GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDPEK 165
G W +A GG YLG+P + + L ++ + + +E R + P
Sbjct: 116 FGEPVWFKAGAQIFSEGGL-DYLGSPALIHAQNIVATLAVQVVLMGLIEGYR-VNGGPAG 173
Query: 166 KK----YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 221
+ YPG +FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP++N
Sbjct: 174 EGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFV-QAIVTGKGPIQN 232
Query: 222 LATHLADPWHNN 233
LA HLADP NN
Sbjct: 233 LADHLADPGTNN 244
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 103/196 (52%), Gaps = 20/196 (10%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 108
E P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNG 121
Query: 109 ---GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------ 157
G W +A GG YLG P V ++ I + + + +E R
Sbjct: 122 VQFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPL 180
Query: 158 SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTG 217
DP YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G G
Sbjct: 181 GEGLDP---LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKG 236
Query: 218 PLENLATHLADPWHNN 233
P+ENLA H+ADP NN
Sbjct: 237 PIENLADHIADPVANN 252
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 106/197 (53%), Gaps = 21/197 (10%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--- 108
GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 53 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 111
Query: 109 ----GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR----- 157
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 112 GVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 170
Query: 158 -SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 216
DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G
Sbjct: 171 LGEVTDP---IYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGK 226
Query: 217 GPLENLATHLADPWHNN 233
GPLENLA HLADP +NN
Sbjct: 227 GPLENLADHLADPVNNN 243
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 66 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKF 125
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK---DP 163
G W +A GG YLG P V ++ I + + + VE R +
Sbjct: 126 GEAVWFKAGSQIFAEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 184
Query: 164 EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLA 223
E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL+
Sbjct: 185 EDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLS 243
Query: 224 THLADPWHNN 233
HLADP NN
Sbjct: 244 DHLADPAVNN 253
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 104/194 (53%), Gaps = 15/194 (7%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--- 108
GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 76 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 134
Query: 109 ----GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK- 161
G W +A GG YLG+P + ++ I + + + +E R
Sbjct: 135 GVKFGEAVWFKAGAQIFSEGG-LDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP 193
Query: 162 --DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL 219
+ YPGG FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+
Sbjct: 194 LGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPI 252
Query: 220 ENLATHLADPWHNN 233
ENLA HLADP +NN
Sbjct: 253 ENLADHLADPVNNN 266
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 70 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 129
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 130 GEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV 188
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLE
Sbjct: 189 VDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLE 244
Query: 221 NLATHLADPWHNN 233
NLA HLADP +NN
Sbjct: 245 NLADHLADPVNNN 257
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 100/193 (51%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL+G GD+G+D L PE R +E E+IH RWAML G L PE L
Sbjct: 69 PSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKF 128
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SME 160
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 129 GEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 187
Query: 161 KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 188 TDP---IYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 243
Query: 221 NLATHLADPWHNN 233
NL HLADP NN
Sbjct: 244 NLNDHLADPVANN 256
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 108
P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 128
Query: 109 GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 161
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 129 GEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV 187
Query: 162 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLE
Sbjct: 188 VDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLE 243
Query: 221 NLATHLADPWHNN 233
NLA HL+DP +NN
Sbjct: 244 NLADHLSDPVNNN 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,323,250
Number of Sequences: 539616
Number of extensions: 4564188
Number of successful extensions: 9147
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8811
Number of HSP's gapped (non-prelim): 136
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)