BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025953
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic
OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1
Length = 234
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 117/150 (78%), Gaps = 1/150 (0%)
Query: 1 MAGI-GASCSFLPSRSKLRTTWLQFETHPGRKVSGKSICRRNLKIRADVNYVNAEEAKNL 59
MAGI S + L S + L+ + G+ VSG I RR+L+I A++ +VNAEEAK L
Sbjct: 1 MAGIISPSPTALYFTSNVGGRRLKAVSWAGKSVSGNVIRRRSLRIAAELKFVNAEEAKQL 60
Query: 60 IAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 119
IA E Y+V+DVRD +Q+ RAHIKS H+PLFI N+DND+GTIIKRTVHNNFSGLFFGLPF
Sbjct: 61 IAEEGYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDNDIGTIIKRTVHNNFSGLFFGLPF 120
Query: 120 TKQNPEFVQSVKSQFSPESKLLVVCQEGLR 149
TK NPEF++SV+++FS +SKLL+VCQEGLR
Sbjct: 121 TKVNPEFLKSVRNEFSQDSKLLLVCQEGLR 150
>sp|Q9SR92|STR10_ARATH Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana
GN=STR10 PE=2 SV=1
Length = 214
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 36 SICRRNLKIRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQD 95
++ + L + V V +EA ++A E Y +LDVR + +A +K S HVPLF+E+ D
Sbjct: 33 AVSGKELILSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLFVEDPD 92
Query: 96 NDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF-VQSVKSQFSPESKLLVVCQEGLRYI 151
N T++K+ +H + GL+ G FT N EF ++ V++ ESK+LVVC EGLR +
Sbjct: 93 NGPITLLKKWIHLGYIGLWTGQRFTMINDEFALRVVEAVPDKESKVLVVCGEGLRSL 149
>sp|Q0WWT7|STR11_ARATH Rhodanese-like domain-containing protein 11, chloroplastic
OS=Arabidopsis thaliana GN=STR11 PE=2 SV=1
Length = 292
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 48 VNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDN-DLGTIIKRTV 106
V + EA I++ +LDVR +S+ N+A IK S VP+F +N DN D GT+ K+
Sbjct: 88 VKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIF-DNDDNLDAGTLSKKVT 146
Query: 107 HNNFSGLFFGLPFTKQNPEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRF 156
G + G P N F+ V+ +F +S+L+V CQ+GLR + C
Sbjct: 147 SFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKGLRSLAACEL 196
>sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic
OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1
Length = 224
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 39 RRNLKIRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDL 98
+R L + V V+ +EA+ L + +LDVR ++Y H + +V ++ ++
Sbjct: 65 KRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIREWTA 124
Query: 99 GTIIKRTVHNNFSGLFFGLPFTKQNPEFVQSVKSQFSPESKLLVVC 144
I +R + F G+F G T++NPEF+QSV+++ E+K++V C
Sbjct: 125 WDIARR-LGFAFFGIFSG---TEENPEFIQSVEAKLDKEAKIIVAC 166
>sp|Q8RUD6|STR19_ARATH Rhodanese-like domain-containing protein 19, mitochondrial
OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1
Length = 169
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 26/113 (23%)
Query: 43 KIRADVNYVNAEEAKNLIAV-ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTI 101
K DV V+ AK ++ RY LDVR N ++ ++H++ + ++P + D G +
Sbjct: 36 KTVEDVETVDVYTAKGFLSTGHRY--LDVRTNEEFAKSHVEEALNIPYMFKT---DEGRV 90
Query: 102 IKRTVHNNFSGLFFGLPFTKQNPEFVQSVKSQFSPESKLLVVCQEGLRYIRFC 154
I NP+F+ V S + L+V C G R R C
Sbjct: 91 I--------------------NPDFLSQVASVCKKDEHLIVACNAGGRGSRAC 123
>sp|Q39129|STR16_ARATH Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis
thaliana GN=STR16 PE=1 SV=2
Length = 120
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 25/94 (26%)
Query: 59 LIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLP 118
L+A RY LDVR ++++ H + +VP ++ SG+
Sbjct: 20 LLAGHRY--LDVRTPEEFSQGHACGAINVPY----------------MNRGASGM----- 56
Query: 119 FTKQNPEFVQSVKSQFSPESKLLVVCQEGLRYIR 152
+NP+F++ V S F ++V CQ G R I+
Sbjct: 57 --SKNPDFLEQVSSHFGQSDNIIVGCQSGGRSIK 88
>sp|P54433|YRKF_BACSU UPF0033 protein YrkF OS=Bacillus subtilis (strain 168) GN=yrkF PE=3
SV=1
Length = 185
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 63 ERYAVLDVRDNSQYNRAHIKSSYHVPLF-IENQDNDL 98
E +LDVR+ +Y +AHI H+PL +E + N+L
Sbjct: 103 ESLNILDVREIEEYEKAHIPGVVHIPLGEVEKRANEL 139
>sp|Q10SX6|ACR22_ORYSJ Arsenate reductase 2.2 OS=Oryza sativa subsp. japonica GN=ACR2.2
PE=1 SV=1
Length = 130
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 48 VNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYH 86
V+YV+A + ++ R AV+DVRD + AHI S+H
Sbjct: 5 VSYVSAAQLVPMLRDPRIAVVDVRDEERIYDAHIAGSHH 43
>sp|Q06597|ARR2_YEAST Arsenical-resistance protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ARR2 PE=4 SV=1
Length = 130
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 48 VNYVNAEEAKNLIAVER--YAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIK 103
V+++ + + K LI +R + V+D+R + R HI +++HVP+ + + L +IK
Sbjct: 2 VSFITSRQLKGLIENQRKDFQVVDLR-REDFARDHITNAWHVPVTAQITEKQLNQLIK 58
>sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18
PE=1 SV=1
Length = 136
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 26/108 (24%)
Query: 47 DVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSS--YHVPLFIENQDNDLGTIIKR 104
+V V+ +AK L+ + LDVR ++ R H +++ ++P +
Sbjct: 13 EVVSVDVSQAKTLLQ-SGHQYLDVRTQDEFRRGHCEAAKIVNIPYML------------- 58
Query: 105 TVHNNFSGLFFGLPFTKQNPEFVQSVKSQFSPESKLLVVCQEGLRYIR 152
N G +N EF++ V S +P +LV CQ G R ++
Sbjct: 59 ---NTPQGRV-------KNQEFLEQVSSLLNPADDILVGCQSGARSLK 96
>sp|P30072|YCF2_EPIVI Protein ycf2 OS=Epifagus virginiana GN=ycf2-A PE=3 SV=1
Length = 2216
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 32 VSGKSICRRNLKIRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFI 91
V+ CR+ + +++ Y K R + + V D+SQ ++ KSS H I
Sbjct: 358 VNKYRFCRKVRNVSSNIKY------KYDSTRSRSSFVQVTDSSQLKGSYYKSSGHFYSVI 411
Query: 92 ENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQSVKSQFSP 136
N+D++ T+I + +FF F + ++S + Q P
Sbjct: 412 SNEDSEYHTLINQREIKPLKSIFFDPSFLQTEATEIESDQLQKRP 456
>sp|Q5R705|SURF4_PONAB Surfeit locus protein 4 OS=Pongo abelii GN=SURF4 PE=2 SV=1
Length = 269
Score = 30.8 bits (68), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 164 KSWFGYSSRQDF-SCTWNCAYLCISIHHFLPRASREVVPVVPCELVL 209
+ WF +S ++D+ TWNC YL S FL + + C LVL
Sbjct: 43 RMWFQWSEQRDYIDTTWNCGYLLASSFVFLNLLGQ----LTGCVLVL 85
>sp|O15260|SURF4_HUMAN Surfeit locus protein 4 OS=Homo sapiens GN=SURF4 PE=1 SV=3
Length = 269
Score = 30.8 bits (68), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 164 KSWFGYSSRQDF-SCTWNCAYLCISIHHFLPRASREVVPVVPCELVL 209
+ WF +S ++D+ TWNC YL S FL + + C LVL
Sbjct: 43 RMWFQWSEQRDYIDTTWNCGYLLASSFVFLNLLGQ----LTGCVLVL 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,579,978
Number of Sequences: 539616
Number of extensions: 3503711
Number of successful extensions: 8410
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 8395
Number of HSP's gapped (non-prelim): 21
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)