Query 025953
Match_columns 245
No_of_seqs 238 out of 1178
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 21:23:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025953.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025953hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 1E-21 3.4E-26 151.6 8.0 95 48-194 1-96 (103)
2 3foj_A Uncharacterized protein 99.8 2.4E-21 8.1E-26 147.2 8.3 95 48-194 1-96 (100)
3 3eme_A Rhodanese-like domain p 99.8 4.2E-21 1.4E-25 146.4 8.1 95 48-194 1-96 (103)
4 3gk5_A Uncharacterized rhodane 99.8 3.3E-21 1.1E-25 148.8 5.6 93 48-194 3-95 (108)
5 1tq1_A AT5G66040, senescence-a 99.8 1.3E-20 4.3E-25 149.7 8.5 111 44-194 13-123 (129)
6 3d1p_A Putative thiosulfate su 99.8 4.9E-20 1.7E-24 147.4 10.1 111 45-194 19-132 (139)
7 1gmx_A GLPE protein; transfera 99.8 7.5E-21 2.6E-25 146.2 4.9 96 47-193 3-98 (108)
8 3ilm_A ALR3790 protein; rhodan 99.8 1.3E-20 4.6E-25 152.4 5.7 112 50-211 1-120 (141)
9 1t3k_A Arath CDC25, dual-speci 99.8 1.6E-20 5.3E-25 153.7 5.2 123 32-194 11-135 (152)
10 3hix_A ALR3790 protein; rhodan 99.8 3.3E-20 1.1E-24 142.6 6.2 91 54-194 1-93 (106)
11 1wv9_A Rhodanese homolog TT165 99.8 4.4E-20 1.5E-24 138.7 6.1 91 49-193 2-92 (94)
12 1qxn_A SUD, sulfide dehydrogen 99.8 4.5E-20 1.6E-24 148.4 6.1 100 46-194 20-123 (137)
13 3i2v_A Adenylyltransferase and 99.8 3.7E-20 1.3E-24 144.8 5.4 115 49-194 1-119 (127)
14 2hhg_A Hypothetical protein RP 99.8 8.9E-20 3E-24 145.5 7.2 106 46-194 19-127 (139)
15 3g5j_A Putative ATP/GTP bindin 99.8 1.3E-20 4.4E-25 148.2 2.0 125 47-194 3-130 (134)
16 3nhv_A BH2092 protein; alpha-b 99.8 3.3E-19 1.1E-23 144.6 9.3 95 49-194 16-114 (144)
17 1e0c_A Rhodanese, sulfurtransf 99.8 6.6E-19 2.3E-23 154.8 11.8 128 49-210 9-142 (271)
18 2fsx_A RV0390, COG0607: rhodan 99.8 4.7E-19 1.6E-23 143.6 9.0 105 48-194 4-121 (148)
19 2k0z_A Uncharacterized protein 99.8 2.3E-19 8E-24 138.7 4.0 92 49-194 5-96 (110)
20 1urh_A 3-mercaptopyruvate sulf 99.8 2.7E-18 9.1E-23 151.8 11.0 127 49-209 4-146 (280)
21 3flh_A Uncharacterized protein 99.7 3.3E-19 1.1E-23 140.6 3.4 95 48-194 14-113 (124)
22 1vee_A Proline-rich protein fa 99.7 8.8E-18 3E-22 134.0 9.9 87 48-163 4-100 (134)
23 3hzu_A Thiosulfate sulfurtrans 99.7 4.1E-18 1.4E-22 154.6 8.8 126 48-209 39-171 (318)
24 1rhs_A Sulfur-substituted rhod 99.7 2.4E-17 8.1E-22 147.3 12.5 128 48-209 7-154 (296)
25 4f67_A UPF0176 protein LPG2838 99.7 9E-18 3.1E-22 149.8 8.3 104 46-194 119-222 (265)
26 3olh_A MST, 3-mercaptopyruvate 99.7 5.4E-17 1.8E-21 146.1 12.5 128 48-209 21-169 (302)
27 1uar_A Rhodanese; sulfurtransf 99.7 6.7E-18 2.3E-22 149.4 6.0 124 49-208 8-138 (285)
28 2j6p_A SB(V)-AS(V) reductase; 99.7 2.5E-17 8.4E-22 134.4 8.9 132 47-231 3-143 (152)
29 3aay_A Putative thiosulfate su 99.7 2E-17 6.8E-22 145.8 8.9 110 49-194 6-119 (277)
30 1e0c_A Rhodanese, sulfurtransf 99.7 3.2E-17 1.1E-21 144.1 9.8 109 49-194 147-264 (271)
31 2jtq_A Phage shock protein E; 99.7 7.5E-18 2.6E-22 124.0 4.3 79 64-193 1-80 (85)
32 2vsw_A Dual specificity protei 99.7 7.2E-18 2.5E-22 136.6 4.3 124 49-205 4-141 (153)
33 1urh_A 3-mercaptopyruvate sulf 99.7 7.5E-17 2.5E-21 142.5 10.0 107 49-194 152-271 (280)
34 3olh_A MST, 3-mercaptopyruvate 99.7 3.7E-17 1.3E-21 147.1 8.0 109 49-194 175-295 (302)
35 3op3_A M-phase inducer phospha 99.7 1.7E-17 6E-22 143.7 4.7 111 46-194 54-176 (216)
36 1whb_A KIAA0055; deubiqutinati 99.7 1.5E-16 5E-21 130.3 9.4 122 46-194 12-141 (157)
37 1c25_A CDC25A; hydrolase, cell 99.7 4.6E-17 1.6E-21 133.1 6.0 110 46-194 20-141 (161)
38 1uar_A Rhodanese; sulfurtransf 99.6 4E-16 1.4E-20 138.0 10.0 106 49-192 146-273 (285)
39 2a2k_A M-phase inducer phospha 99.6 1.7E-16 5.6E-21 131.6 6.9 109 46-194 21-143 (175)
40 1rhs_A Sulfur-substituted rhod 99.6 2.8E-16 9.5E-21 140.3 8.8 108 49-193 160-280 (296)
41 2ouc_A Dual specificity protei 99.6 1.1E-16 3.7E-21 126.7 5.2 110 49-194 1-132 (142)
42 1qb0_A Protein (M-phase induce 99.6 6.6E-16 2.2E-20 132.5 10.3 109 46-194 41-163 (211)
43 2gwf_A Ubiquitin carboxyl-term 99.6 6.2E-16 2.1E-20 126.9 9.1 120 46-194 17-146 (157)
44 1hzm_A Dual specificity protei 99.6 7E-17 2.4E-21 130.6 3.3 116 47-194 14-142 (154)
45 3hzu_A Thiosulfate sulfurtrans 99.6 8.6E-16 2.9E-20 139.2 10.8 106 49-194 179-301 (318)
46 1okg_A Possible 3-mercaptopyru 99.6 3.7E-16 1.3E-20 145.0 8.1 123 48-205 13-151 (373)
47 3tg1_B Dual specificity protei 99.6 1.4E-15 4.9E-20 124.4 9.4 111 46-194 8-142 (158)
48 3f4a_A Uncharacterized protein 99.6 7.7E-17 2.6E-21 134.3 1.6 111 46-194 28-152 (169)
49 3aay_A Putative thiosulfate su 99.6 6.5E-16 2.2E-20 136.1 7.4 104 51-193 146-267 (277)
50 1yt8_A Thiosulfate sulfurtrans 99.6 8.6E-16 2.9E-20 148.2 5.8 97 48-194 6-104 (539)
51 2eg4_A Probable thiosulfate su 99.6 7.6E-15 2.6E-19 126.4 11.1 108 62-209 4-115 (230)
52 2wlr_A Putative thiosulfate su 99.6 4.9E-15 1.7E-19 138.8 8.9 110 49-194 124-244 (423)
53 3ics_A Coenzyme A-disulfide re 99.6 2.4E-15 8.3E-20 145.2 6.6 99 43-194 483-581 (588)
54 3tp9_A Beta-lactamase and rhod 99.6 2.4E-15 8.4E-20 142.2 6.5 98 46-194 371-468 (474)
55 1yt8_A Thiosulfate sulfurtrans 99.5 6.2E-15 2.1E-19 142.3 8.4 98 46-194 374-471 (539)
56 3ntd_A FAD-dependent pyridine 99.5 2.6E-15 8.9E-20 143.7 5.4 95 44-192 468-562 (565)
57 2eg4_A Probable thiosulfate su 99.5 1E-14 3.5E-19 125.6 8.2 94 49-194 121-224 (230)
58 2wlr_A Putative thiosulfate su 99.5 1.7E-14 6E-19 135.0 9.4 115 49-193 272-398 (423)
59 3utn_X Thiosulfate sulfurtrans 99.5 3.3E-14 1.1E-18 130.1 10.5 128 32-194 11-154 (327)
60 3r2u_A Metallo-beta-lactamase 99.4 9.1E-15 3.1E-19 138.7 0.0 87 56-193 379-465 (466)
61 1okg_A Possible 3-mercaptopyru 99.4 1.8E-13 6.3E-18 126.8 7.1 95 62-193 172-286 (373)
62 3utn_X Thiosulfate sulfurtrans 99.4 2.6E-13 9E-18 124.1 7.9 93 50-162 185-300 (327)
63 3tp9_A Beta-lactamase and rhod 99.3 1.1E-12 3.7E-17 124.1 7.8 83 45-163 269-351 (474)
64 3r2u_A Metallo-beta-lactamase 98.9 1.4E-09 4.6E-14 103.1 8.1 69 63-165 295-363 (466)
65 2f46_A Hypothetical protein; s 98.0 1E-05 3.6E-10 65.3 6.6 85 50-162 29-128 (156)
66 4erc_A Dual specificity protei 93.7 0.2 6.9E-06 38.6 7.3 88 52-162 24-116 (150)
67 3rgo_A Protein-tyrosine phosph 93.0 0.26 8.7E-06 38.3 6.8 30 133-162 85-117 (157)
68 2img_A Dual specificity protei 91.9 0.52 1.8E-05 36.1 7.3 80 52-154 25-107 (151)
69 1v8c_A MOAD related protein; r 91.9 0.018 6E-07 47.5 -1.4 26 65-94 122-147 (168)
70 2hcm_A Dual specificity protei 90.9 0.46 1.6E-05 37.6 6.2 29 134-162 86-117 (164)
71 2nt2_A Protein phosphatase sli 90.6 0.45 1.5E-05 36.8 5.7 28 135-162 79-109 (145)
72 1yz4_A DUSP15, dual specificit 89.2 0.84 2.9E-05 35.9 6.4 28 135-162 82-112 (160)
73 1xri_A AT1G05000; structural g 88.7 1.1 3.6E-05 34.7 6.6 26 136-161 91-118 (151)
74 1fpz_A Cyclin-dependent kinase 88.1 1.9 6.4E-05 35.6 8.1 34 126-159 122-157 (212)
75 2r0b_A Serine/threonine/tyrosi 88.1 1.8 6.2E-05 33.5 7.6 28 135-162 88-118 (154)
76 2e0t_A Dual specificity phosph 88.0 0.78 2.7E-05 35.5 5.4 27 136-162 84-113 (151)
77 1wrm_A Dual specificity phosph 87.5 1.1 3.8E-05 35.5 6.1 28 135-162 81-111 (165)
78 3ezz_A Dual specificity protei 87.4 1.3 4.3E-05 34.0 6.2 30 133-162 77-109 (144)
79 3f81_A Dual specificity protei 86.9 1.2 4.2E-05 35.6 6.0 26 137-162 115-143 (183)
80 2esb_A Dual specificity protei 86.8 1.6 5.3E-05 35.6 6.7 28 135-162 95-125 (188)
81 2wgp_A Dual specificity protei 86.4 1.4 4.8E-05 36.0 6.2 28 135-162 101-131 (190)
82 1zzw_A Dual specificity protei 86.3 1.6 5.4E-05 33.7 6.2 28 135-162 81-111 (149)
83 3ec2_A DNA replication protein 85.7 0.58 2E-05 37.1 3.5 26 212-237 38-63 (180)
84 2g6z_A Dual specificity protei 83.5 1.8 6.3E-05 36.3 5.8 29 134-162 80-111 (211)
85 2pq5_A Dual specificity protei 83.5 4.8 0.00017 33.1 8.3 27 136-162 130-159 (205)
86 2y96_A Dual specificity phosph 82.6 6.6 0.00023 32.8 8.9 28 135-162 137-167 (219)
87 1jbk_A CLPB protein; beta barr 81.7 0.66 2.2E-05 35.8 2.1 24 212-235 43-66 (195)
88 3s4e_A Dual specificity protei 77.8 5.2 0.00018 30.6 6.2 29 134-162 78-109 (144)
89 2i6j_A Ssoptp, sulfolobus solf 76.6 13 0.00044 28.4 8.3 25 53-77 18-42 (161)
90 2p65_A Hypothetical protein PF 76.0 1.3 4.6E-05 34.1 2.3 24 212-235 43-66 (187)
91 2w58_A DNAI, primosome compone 75.7 1.4 4.6E-05 35.4 2.3 24 213-236 55-78 (202)
92 2q05_A Late protein H1, dual s 75.7 4.8 0.00016 32.8 5.8 20 135-154 123-143 (195)
93 1ywf_A Phosphotyrosine protein 74.6 4.2 0.00014 35.8 5.5 50 42-91 47-102 (296)
94 2qu8_A Putative nucleolar GTP- 74.4 1.4 4.8E-05 36.1 2.2 21 214-234 31-51 (228)
95 1njg_A DNA polymerase III subu 73.6 1.8 6.1E-05 34.4 2.6 24 212-235 45-68 (250)
96 2ged_A SR-beta, signal recogni 72.4 1.3 4.5E-05 34.8 1.4 21 214-234 50-70 (193)
97 3b9q_A Chloroplast SRP recepto 72.4 2.6 8.8E-05 37.2 3.5 32 206-237 94-125 (302)
98 3bos_A Putative DNA replicatio 72.0 1.9 6.4E-05 34.8 2.3 25 212-236 52-76 (242)
99 2chg_A Replication factor C sm 71.8 1.6 5.3E-05 34.5 1.8 20 215-234 41-60 (226)
100 3n70_A Transport activator; si 71.2 1.6 5.6E-05 33.5 1.7 26 212-237 24-49 (145)
101 1in4_A RUVB, holliday junction 70.6 1.9 6.4E-05 38.1 2.2 25 211-235 50-74 (334)
102 1ixz_A ATP-dependent metallopr 70.3 1.9 6.5E-05 36.0 2.0 25 210-234 47-71 (254)
103 1htw_A HI0065; nucleotide-bind 70.1 2.3 7.8E-05 33.9 2.4 29 208-236 29-57 (158)
104 3s4o_A Protein tyrosine phosph 69.7 26 0.00088 26.7 8.5 25 49-73 32-57 (167)
105 1ofh_A ATP-dependent HSL prote 69.5 2.1 7.3E-05 36.2 2.2 24 212-235 50-73 (310)
106 2kjq_A DNAA-related protein; s 69.3 1.9 6.4E-05 33.8 1.7 26 211-236 35-60 (149)
107 3t15_A Ribulose bisphosphate c 69.3 2.1 7.1E-05 37.2 2.2 27 209-235 33-59 (293)
108 3gxh_A Putative phosphatase (D 68.6 32 0.0011 26.7 9.0 27 49-75 26-52 (157)
109 2bbw_A Adenylate kinase 4, AK4 68.4 2 6.9E-05 35.9 1.8 23 211-233 26-48 (246)
110 2og2_A Putative signal recogni 68.3 3.4 0.00012 37.5 3.4 33 205-237 150-182 (359)
111 1lv7_A FTSH; alpha/beta domain 68.2 2.6 8.8E-05 35.2 2.4 26 210-235 43-68 (257)
112 3lnc_A Guanylate kinase, GMP k 68.1 1.8 6.1E-05 35.7 1.4 30 204-233 19-48 (231)
113 3cf0_A Transitional endoplasmi 67.1 2.6 9E-05 36.5 2.4 26 209-234 46-71 (301)
114 2qby_A CDC6 homolog 1, cell di 66.3 2.4 8.3E-05 36.8 2.0 25 211-235 44-68 (386)
115 3zvl_A Bifunctional polynucleo 66.2 12 0.00041 34.1 6.7 26 207-232 253-278 (416)
116 4eun_A Thermoresistant glucoki 66.1 2.4 8.4E-05 34.1 1.8 23 211-233 28-50 (200)
117 3rz2_A Protein tyrosine phosph 66.0 38 0.0013 27.0 9.1 24 51-74 48-72 (189)
118 3lxx_A GTPase IMAP family memb 65.7 2.2 7.4E-05 35.4 1.4 20 215-234 32-51 (239)
119 2qz4_A Paraplegin; AAA+, SPG7, 65.7 3.1 0.00011 34.4 2.4 26 209-234 36-61 (262)
120 3h4m_A Proteasome-activating n 65.6 2.8 9.6E-05 35.4 2.2 25 210-234 49-73 (285)
121 3cm3_A Late protein H1, dual s 65.3 7.3 0.00025 30.9 4.6 26 136-161 107-135 (176)
122 2wsm_A Hydrogenase expression/ 65.0 2 6.9E-05 34.7 1.1 23 213-235 31-53 (221)
123 2www_A Methylmalonic aciduria 65.0 2.3 8E-05 38.1 1.6 23 212-234 74-96 (349)
124 2p5s_A RAS and EF-hand domain 64.8 2.6 9E-05 33.4 1.8 21 214-234 30-50 (199)
125 1rj9_A FTSY, signal recognitio 64.6 3.5 0.00012 36.4 2.7 27 211-237 101-127 (304)
126 1iy2_A ATP-dependent metallopr 64.5 3.2 0.00011 35.3 2.3 25 210-234 71-95 (278)
127 2hf9_A Probable hydrogenase ni 64.5 2.1 7.2E-05 34.7 1.1 21 215-235 41-61 (226)
128 3syl_A Protein CBBX; photosynt 64.4 2.3 7.8E-05 36.3 1.4 23 212-234 67-89 (309)
129 2ehv_A Hypothetical protein PH 64.3 2.7 9.2E-05 34.4 1.8 24 210-233 28-51 (251)
130 2atv_A RERG, RAS-like estrogen 64.2 2.4 8.3E-05 33.5 1.4 20 215-234 31-50 (196)
131 2hxp_A Dual specificity protei 64.2 5.8 0.0002 30.8 3.7 29 134-162 82-113 (155)
132 2v1u_A Cell division control p 63.9 3.4 0.00012 35.9 2.4 26 211-236 43-68 (387)
133 2bjv_A PSP operon transcriptio 63.8 3 0.0001 35.0 2.0 25 212-236 29-53 (265)
134 3co5_A Putative two-component 63.6 2 7E-05 32.9 0.9 24 212-235 27-50 (143)
135 2zts_A Putative uncharacterize 63.6 3.6 0.00012 33.5 2.5 21 212-232 30-50 (251)
136 2fna_A Conserved hypothetical 63.6 2.5 8.5E-05 36.3 1.5 23 213-235 31-53 (357)
137 2g3y_A GTP-binding protein GEM 63.5 2.5 8.6E-05 34.9 1.4 18 215-232 40-57 (211)
138 2x8a_A Nuclear valosin-contain 63.3 3.2 0.00011 35.8 2.1 27 208-234 40-66 (274)
139 3aez_A Pantothenate kinase; tr 63.3 2.7 9.4E-05 37.2 1.7 27 209-235 87-113 (312)
140 1vma_A Cell division protein F 63.2 5.3 0.00018 35.3 3.6 29 209-237 101-129 (306)
141 2qgz_A Helicase loader, putati 63.1 3.3 0.00011 36.3 2.2 25 212-236 152-176 (308)
142 1odf_A YGR205W, hypothetical 3 63.0 3.1 0.00011 36.4 2.0 26 210-235 29-54 (290)
143 2px0_A Flagellar biosynthesis 62.9 4.5 0.00016 35.4 3.1 32 210-241 103-134 (296)
144 1oix_A RAS-related protein RAB 62.7 2.4 8E-05 33.8 1.1 21 214-234 31-51 (191)
145 2qby_B CDC6 homolog 3, cell di 62.5 3.4 0.00011 36.2 2.2 24 212-235 45-68 (384)
146 2r62_A Cell division protease 62.4 2.5 8.5E-05 35.4 1.2 24 211-234 43-66 (268)
147 1cr0_A DNA primase/helicase; R 62.3 3.5 0.00012 35.3 2.2 27 209-235 32-58 (296)
148 1fnn_A CDC6P, cell division co 62.2 3.8 0.00013 35.8 2.4 22 214-235 46-67 (389)
149 1l8q_A Chromosomal replication 61.9 3.3 0.00011 35.9 2.0 25 212-236 37-61 (324)
150 2qen_A Walker-type ATPase; unk 61.8 3.2 0.00011 35.5 1.9 22 213-234 32-53 (350)
151 1w5s_A Origin recognition comp 61.6 3.9 0.00013 36.1 2.4 25 211-235 49-75 (412)
152 3t34_A Dynamin-related protein 61.0 3.5 0.00012 36.7 2.0 26 208-234 31-56 (360)
153 3b9p_A CG5977-PA, isoform A; A 60.8 4.2 0.00014 34.6 2.4 24 211-234 53-76 (297)
154 3emu_A Leucine rich repeat and 60.7 16 0.00054 28.6 5.7 29 134-162 84-115 (161)
155 2p5t_B PEZT; postsegregational 59.8 3.9 0.00013 34.4 2.0 25 210-234 30-54 (253)
156 4dhe_A Probable GTP-binding pr 59.7 3.6 0.00012 33.0 1.7 23 214-236 31-53 (223)
157 3l0i_B RAS-related protein RAB 59.4 2.5 8.6E-05 33.6 0.7 19 215-233 36-54 (199)
158 3e70_C DPA, signal recognition 58.7 4.9 0.00017 35.9 2.6 28 210-237 127-154 (328)
159 1mv5_A LMRA, multidrug resista 58.5 3.6 0.00012 34.7 1.6 30 205-234 21-50 (243)
160 2j1l_A RHO-related GTP-binding 58.4 3.1 0.00011 33.6 1.1 20 215-234 37-56 (214)
161 2b6h_A ADP-ribosylation factor 58.4 3.1 0.00011 33.0 1.1 19 215-233 32-50 (192)
162 2cbz_A Multidrug resistance-as 58.1 4.2 0.00014 34.3 1.9 30 205-234 24-53 (237)
163 3te6_A Regulatory protein SIR3 58.0 4.3 0.00015 36.2 2.1 25 211-235 44-68 (318)
164 3pfi_A Holliday junction ATP-d 58.0 3.9 0.00013 35.4 1.8 22 214-235 57-78 (338)
165 1gwn_A RHO-related GTP-binding 57.7 3.2 0.00011 33.5 1.1 21 214-234 30-50 (205)
166 2qm8_A GTPase/ATPase; G protei 57.3 6.3 0.00022 35.0 3.0 25 209-233 52-76 (337)
167 1gvn_B Zeta; postsegregational 57.2 4.3 0.00015 35.2 1.9 23 211-233 32-54 (287)
168 1g8p_A Magnesium-chelatase 38 57.1 3.8 0.00013 35.4 1.5 23 214-236 47-69 (350)
169 2yv5_A YJEQ protein; hydrolase 57.1 3.7 0.00013 35.9 1.5 29 213-242 166-194 (302)
170 1f2t_A RAD50 ABC-ATPase; DNA d 57.1 4.4 0.00015 31.6 1.7 24 212-235 23-46 (149)
171 1xwi_A SKD1 protein; VPS4B, AA 56.8 5.4 0.00018 35.0 2.5 26 210-235 43-68 (322)
172 1d2n_A N-ethylmaleimide-sensit 56.8 4.5 0.00015 34.1 1.9 24 211-234 63-86 (272)
173 2oud_A Dual specificity protei 56.7 9.1 0.00031 30.4 3.7 28 135-162 85-115 (177)
174 1um8_A ATP-dependent CLP prote 56.6 5 0.00017 35.6 2.3 25 211-235 71-95 (376)
175 1ji0_A ABC transporter; ATP bi 56.5 4.3 0.00015 34.3 1.7 29 206-234 26-54 (240)
176 2qtf_A Protein HFLX, GTP-bindi 56.5 4 0.00014 36.9 1.6 24 212-235 179-202 (364)
177 1zu4_A FTSY; GTPase, signal re 56.2 7 0.00024 34.7 3.1 31 207-237 100-130 (320)
178 1hqc_A RUVB; extended AAA-ATPa 56.1 4.4 0.00015 34.7 1.7 25 212-236 38-62 (324)
179 1g6h_A High-affinity branched- 55.9 4.7 0.00016 34.4 1.9 29 206-234 27-55 (257)
180 3q3j_B RHO-related GTP-binding 55.8 4.2 0.00014 32.9 1.5 21 215-235 30-50 (214)
181 2hup_A RAS-related protein RAB 55.7 3.9 0.00013 32.6 1.3 20 215-234 32-51 (201)
182 2yhs_A FTSY, cell division pro 55.6 6.7 0.00023 37.4 3.1 31 207-237 288-318 (503)
183 2pcj_A ABC transporter, lipopr 55.5 4 0.00014 34.1 1.3 28 206-233 24-51 (224)
184 1sgw_A Putative ABC transporte 55.3 4.2 0.00015 33.9 1.5 28 206-233 29-56 (214)
185 4gzl_A RAS-related C3 botulinu 55.2 3.8 0.00013 32.8 1.1 19 215-233 33-51 (204)
186 2e87_A Hypothetical protein PH 55.1 4.2 0.00014 36.2 1.5 21 214-234 169-189 (357)
187 3tif_A Uncharacterized ABC tra 54.8 5.1 0.00018 33.7 1.9 29 206-234 25-53 (235)
188 2r44_A Uncharacterized protein 54.4 4.5 0.00015 35.1 1.5 22 213-234 47-68 (331)
189 3d8b_A Fidgetin-like protein 1 54.2 6 0.00021 35.1 2.4 25 210-234 115-139 (357)
190 2yz2_A Putative ABC transporte 54.2 5.3 0.00018 34.3 1.9 29 206-234 27-55 (266)
191 1of1_A Thymidine kinase; trans 54.1 5.3 0.00018 36.7 2.0 25 211-235 48-72 (376)
192 3uk6_A RUVB-like 2; hexameric 54.1 5.1 0.00018 35.0 1.9 25 212-236 70-94 (368)
193 2p67_A LAO/AO transport system 54.1 5.3 0.00018 35.4 2.0 25 210-234 54-78 (341)
194 2zu0_C Probable ATP-dependent 53.9 5.3 0.00018 34.3 1.9 29 206-234 40-68 (267)
195 2c46_A MRNA capping enzyme; ph 53.9 42 0.0014 28.3 7.6 24 50-73 66-92 (241)
196 2pze_A Cystic fibrosis transme 53.8 5 0.00017 33.6 1.7 30 205-234 27-56 (229)
197 1ohe_A CDC14B, CDC14B2 phospha 53.6 54 0.0018 29.3 8.6 19 135-153 267-286 (348)
198 2ghi_A Transport protein; mult 53.5 5.5 0.00019 34.1 1.9 29 206-234 40-68 (260)
199 3def_A T7I23.11 protein; chlor 53.4 4.1 0.00014 34.4 1.1 19 215-233 39-57 (262)
200 2ewv_A Twitching motility prot 53.3 5.3 0.00018 36.1 1.9 27 209-235 133-159 (372)
201 2ff7_A Alpha-hemolysin translo 53.2 5.2 0.00018 34.0 1.7 29 206-234 29-57 (247)
202 4fcw_A Chaperone protein CLPB; 53.2 7.4 0.00025 33.0 2.7 25 212-236 47-71 (311)
203 2nq2_C Hypothetical ABC transp 53.2 5.2 0.00018 34.2 1.7 30 205-234 24-53 (253)
204 1sxj_D Activator 1 41 kDa subu 53.2 5.3 0.00018 34.5 1.8 21 215-235 61-81 (353)
205 3pvs_A Replication-associated 53.1 5.1 0.00018 37.2 1.8 23 214-236 52-74 (447)
206 2d2e_A SUFC protein; ABC-ATPas 53.0 5.2 0.00018 33.9 1.7 29 206-234 23-51 (250)
207 2olj_A Amino acid ABC transpor 52.6 5.7 0.0002 34.2 1.9 29 206-234 44-72 (263)
208 1vpl_A ABC transporter, ATP-bi 52.5 5.8 0.0002 34.0 1.9 29 206-234 35-63 (256)
209 1b0u_A Histidine permease; ABC 52.1 5.9 0.0002 33.9 1.9 28 206-233 26-53 (262)
210 1jr3_A DNA polymerase III subu 52.1 6.9 0.00023 34.0 2.4 24 212-235 38-61 (373)
211 2z4s_A Chromosomal replication 52.1 6.1 0.00021 36.4 2.1 25 212-236 130-154 (440)
212 3eie_A Vacuolar protein sortin 52.0 7.2 0.00025 33.9 2.5 24 211-234 50-73 (322)
213 2pjz_A Hypothetical protein ST 52.0 5.8 0.0002 34.2 1.8 29 205-234 24-52 (263)
214 2ixe_A Antigen peptide transpo 51.8 6.1 0.00021 34.1 1.9 30 205-234 38-67 (271)
215 1h65_A Chloroplast outer envel 51.7 4.6 0.00016 34.2 1.1 19 215-233 42-60 (270)
216 3th5_A RAS-related C3 botulinu 56.9 3.1 0.00011 33.1 0.0 19 215-233 33-51 (204)
217 3u61_B DNA polymerase accessor 51.1 7.9 0.00027 33.3 2.6 25 211-235 47-71 (324)
218 3hws_A ATP-dependent CLP prote 51.1 5.8 0.0002 35.0 1.7 23 212-234 51-73 (363)
219 2ihy_A ABC transporter, ATP-bi 50.7 5.8 0.0002 34.4 1.6 28 206-233 41-68 (279)
220 3llm_A ATP-dependent RNA helic 50.2 6.3 0.00021 32.6 1.7 19 212-230 76-94 (235)
221 3p32_A Probable GTPase RV1496/ 50.2 5.6 0.00019 35.4 1.5 24 212-235 79-102 (355)
222 4b4t_L 26S protease subunit RP 50.0 7.7 0.00026 36.2 2.4 28 208-235 211-238 (437)
223 1udx_A The GTP-binding protein 49.8 6 0.00021 36.6 1.7 29 207-235 152-180 (416)
224 4b4t_M 26S protease regulatory 49.6 7.9 0.00027 36.1 2.4 28 208-235 211-238 (434)
225 1sq5_A Pantothenate kinase; P- 48.6 5.9 0.0002 34.5 1.3 25 210-234 78-102 (308)
226 1t9h_A YLOQ, probable GTPase E 48.2 4.5 0.00015 35.9 0.5 31 212-242 173-203 (307)
227 1iqp_A RFCS; clamp loader, ext 48.1 7.1 0.00024 33.1 1.8 21 215-235 49-69 (327)
228 2gza_A Type IV secretion syste 48.1 5.7 0.00019 35.7 1.2 27 208-234 171-197 (361)
229 3gfo_A Cobalt import ATP-bindi 48.0 6.9 0.00024 34.0 1.7 28 206-233 28-55 (275)
230 1ypw_A Transitional endoplasmi 47.9 9.3 0.00032 38.2 2.8 27 207-233 233-259 (806)
231 3jvv_A Twitching mobility prot 47.8 5.9 0.0002 35.7 1.2 24 209-232 120-143 (356)
232 3a8t_A Adenylate isopentenyltr 47.8 6.7 0.00023 35.5 1.6 21 212-232 40-60 (339)
233 4b4t_K 26S protease regulatory 47.5 9 0.00031 35.6 2.5 29 208-236 202-230 (428)
234 1nlf_A Regulatory protein REPA 47.3 6.6 0.00023 33.3 1.4 24 211-234 29-52 (279)
235 2pt7_A CAG-ALFA; ATPase, prote 46.9 6 0.00021 35.1 1.1 27 209-235 168-194 (330)
236 1z47_A CYSA, putative ABC-tran 46.7 7.2 0.00025 35.3 1.6 29 205-233 34-62 (355)
237 1sxj_E Activator 1 40 kDa subu 46.5 8.3 0.00028 33.4 2.0 23 211-234 36-58 (354)
238 2rcn_A Probable GTPase ENGC; Y 46.4 6.3 0.00022 35.8 1.2 24 212-235 215-238 (358)
239 1svm_A Large T antigen; AAA+ f 46.3 8.4 0.00029 35.1 2.0 27 208-234 165-191 (377)
240 2qp9_X Vacuolar protein sortin 46.1 9.5 0.00033 33.9 2.3 24 211-234 83-106 (355)
241 1v43_A Sugar-binding transport 45.8 8.1 0.00028 35.2 1.8 29 205-233 30-58 (372)
242 1j8m_F SRP54, signal recogniti 45.8 12 0.0004 32.8 2.8 26 212-237 98-123 (297)
243 1lw7_A Transcriptional regulat 45.7 9.8 0.00034 33.8 2.4 30 204-233 162-191 (365)
244 2bbs_A Cystic fibrosis transme 45.7 7.5 0.00026 34.0 1.5 28 207-234 59-86 (290)
245 1u0l_A Probable GTPase ENGC; p 45.5 7 0.00024 34.0 1.3 23 212-234 169-191 (301)
246 2r6a_A DNAB helicase, replicat 45.4 10 0.00034 34.9 2.4 23 211-233 202-224 (454)
247 4g1u_C Hemin import ATP-bindin 45.2 8 0.00027 33.2 1.6 29 206-234 31-59 (266)
248 2v9p_A Replication protein E1; 45.1 9.2 0.00031 33.9 2.0 27 208-234 122-148 (305)
249 2yyz_A Sugar ABC transporter, 45.0 8.6 0.00029 34.8 1.9 30 205-234 22-51 (359)
250 3cnl_A YLQF, putative uncharac 44.9 6.7 0.00023 33.6 1.1 20 214-233 101-120 (262)
251 1g29_1 MALK, maltose transport 44.9 8 0.00027 35.2 1.6 30 205-234 22-51 (372)
252 2it1_A 362AA long hypothetical 44.5 8.7 0.0003 34.8 1.8 30 205-234 22-51 (362)
253 3vfd_A Spastin; ATPase, microt 44.1 8.9 0.0003 34.3 1.8 22 212-233 148-169 (389)
254 2ce7_A Cell division protein F 43.9 10 0.00036 35.6 2.3 25 209-233 46-70 (476)
255 1oxx_K GLCV, glucose, ABC tran 43.8 7.7 0.00026 35.0 1.4 28 206-233 25-52 (353)
256 1yn9_A BVP, polynucleotide 5'- 43.4 29 0.001 26.9 4.6 27 136-162 112-141 (169)
257 2qag_A Septin-2, protein NEDD5 43.3 8.8 0.0003 34.4 1.6 18 215-232 40-57 (361)
258 3lv8_A DTMP kinase, thymidylat 43.1 9.6 0.00033 32.3 1.8 22 212-233 27-48 (236)
259 3tqc_A Pantothenate kinase; bi 43.1 9.6 0.00033 34.0 1.8 25 211-235 91-115 (321)
260 1sxj_B Activator 1 37 kDa subu 43.1 11 0.00038 31.8 2.2 20 215-234 45-64 (323)
261 2chq_A Replication factor C sm 43.0 9.7 0.00033 32.1 1.8 21 215-235 41-61 (319)
262 1sxj_A Activator 1 95 kDa subu 42.9 11 0.00038 35.3 2.4 25 211-235 76-100 (516)
263 1w36_D RECD, exodeoxyribonucle 42.6 9.3 0.00032 36.8 1.8 22 212-233 164-185 (608)
264 1p9r_A General secretion pathw 42.4 9.1 0.00031 35.3 1.6 23 211-233 166-188 (418)
265 3o47_A ADP-ribosylation factor 42.4 11 0.00037 33.2 2.1 19 215-233 168-186 (329)
266 2f6r_A COA synthase, bifunctio 42.2 12 0.00041 32.1 2.3 24 210-233 73-96 (281)
267 3m6a_A ATP-dependent protease 42.1 11 0.00036 35.9 2.1 25 212-236 108-132 (543)
268 4e22_A Cytidylate kinase; P-lo 42.1 9.9 0.00034 31.9 1.7 24 210-233 25-48 (252)
269 3nh6_A ATP-binding cassette SU 41.9 9.7 0.00033 33.6 1.7 29 206-234 74-102 (306)
270 4b4t_H 26S protease regulatory 41.8 12 0.00041 35.4 2.3 27 208-234 239-265 (467)
271 3nbm_A PTS system, lactose-spe 41.8 18 0.00061 27.1 2.9 24 137-160 6-29 (108)
272 4b4t_J 26S protease regulatory 41.6 12 0.0004 34.7 2.2 28 208-235 178-205 (405)
273 2zan_A Vacuolar protein sortin 41.4 12 0.00041 34.4 2.3 26 210-235 165-190 (444)
274 2dhr_A FTSH; AAA+ protein, hex 41.3 15 0.00051 34.7 3.0 27 209-235 61-87 (499)
275 3bh0_A DNAB-like replicative h 41.1 11 0.00036 33.1 1.8 22 211-232 67-88 (315)
276 1puj_A YLQF, conserved hypothe 40.9 8.4 0.00029 33.3 1.1 20 214-233 122-141 (282)
277 1sxj_C Activator 1 40 kDa subu 40.8 12 0.00042 32.5 2.2 21 215-235 49-69 (340)
278 2wkq_A NPH1-1, RAS-related C3 40.6 8.6 0.00029 32.7 1.1 20 214-233 157-176 (332)
279 3kl4_A SRP54, signal recogniti 40.6 15 0.00051 34.2 2.8 26 211-236 96-121 (433)
280 3pxg_A Negative regulator of g 40.1 11 0.00038 34.9 1.9 22 214-235 203-224 (468)
281 3tlx_A Adenylate kinase 2; str 40.0 11 0.00039 31.4 1.7 22 211-232 28-49 (243)
282 3euj_A Chromosome partition pr 39.9 14 0.00048 34.9 2.5 34 207-241 25-58 (483)
283 4b4t_I 26S protease regulatory 39.8 13 0.00044 34.9 2.2 29 207-235 211-239 (437)
284 3upu_A ATP-dependent DNA helic 39.7 11 0.00036 34.7 1.6 20 214-233 47-66 (459)
285 1rxd_A Protein tyrosine phosph 39.6 29 0.00098 26.1 3.9 28 46-73 22-50 (159)
286 3fvq_A Fe(3+) IONS import ATP- 39.6 10 0.00035 34.4 1.5 28 206-233 24-51 (359)
287 1ls1_A Signal recognition part 39.4 16 0.00053 31.8 2.6 27 211-237 97-123 (295)
288 3pxi_A Negative regulator of g 39.1 12 0.00039 36.8 1.9 23 214-236 523-545 (758)
289 3nbx_X ATPase RAVA; AAA+ ATPas 38.7 12 0.00042 35.4 1.9 23 214-236 43-65 (500)
290 3gee_A MNME, tRNA modification 38.5 11 0.00036 35.4 1.4 20 215-234 236-255 (476)
291 3nme_A Ptpkis1 protein, SEX4 g 38.4 71 0.0024 27.7 6.7 27 136-162 105-134 (294)
292 3geh_A MNME, tRNA modification 38.4 9.5 0.00032 35.6 1.1 20 215-234 227-246 (462)
293 3rlf_A Maltose/maltodextrin im 38.1 13 0.00043 34.1 1.8 29 206-234 23-51 (381)
294 2j16_A SDP-1, tyrosine-protein 38.0 28 0.00097 28.1 3.8 29 134-162 114-145 (182)
295 2q6t_A DNAB replication FORK h 37.9 14 0.00048 33.8 2.2 22 211-232 199-220 (444)
296 2v3c_C SRP54, signal recogniti 37.7 12 0.00042 34.6 1.7 26 211-236 98-123 (432)
297 3v0d_A Voltage-sensor containi 37.5 60 0.0021 29.0 6.2 89 51-162 50-146 (339)
298 3nwj_A ATSK2; P loop, shikimat 37.2 12 0.00042 31.9 1.5 22 212-233 48-69 (250)
299 3gd7_A Fusion complex of cysti 36.9 12 0.00041 34.3 1.5 29 205-233 40-68 (390)
300 4aby_A DNA repair protein RECN 36.6 9.5 0.00033 34.1 0.8 25 207-232 56-80 (415)
301 4a1f_A DNAB helicase, replicat 36.6 12 0.00041 33.6 1.4 21 212-232 46-66 (338)
302 2oap_1 GSPE-2, type II secreti 36.5 8.8 0.0003 36.4 0.5 25 210-234 258-282 (511)
303 3dpu_A RAB family protein; roc 35.4 13 0.00045 34.8 1.5 22 215-236 44-65 (535)
304 3e1s_A Exodeoxyribonuclease V, 35.1 15 0.00053 35.1 2.0 24 212-235 204-227 (574)
305 2qmh_A HPR kinase/phosphorylas 34.9 15 0.00052 30.9 1.7 28 205-232 27-54 (205)
306 2axn_A 6-phosphofructo-2-kinas 34.8 22 0.00074 33.6 3.0 24 210-233 33-56 (520)
307 3hu3_A Transitional endoplasmi 33.8 18 0.00063 33.9 2.3 26 209-234 235-260 (489)
308 1tq4_A IIGP1, interferon-induc 33.6 14 0.00046 34.2 1.3 23 213-235 70-92 (413)
309 3dm5_A SRP54, signal recogniti 33.6 19 0.00064 33.7 2.3 26 211-236 99-124 (443)
310 2qag_B Septin-6, protein NEDD5 33.5 16 0.00055 33.9 1.8 26 208-233 36-63 (427)
311 3lvq_E ARF-GAP with SH3 domain 33.5 14 0.00049 34.0 1.5 20 215-234 325-344 (497)
312 3ec1_A YQEH GTPase; atnos1, at 33.0 15 0.00051 33.0 1.4 22 214-235 164-185 (369)
313 2c9o_A RUVB-like 1; hexameric 32.9 19 0.00066 33.0 2.2 23 213-235 64-86 (456)
314 3cf2_A TER ATPase, transitiona 32.9 22 0.00076 35.8 2.8 29 206-234 232-260 (806)
315 3pxi_A Negative regulator of g 32.5 16 0.00056 35.7 1.8 22 214-235 203-224 (758)
316 1r6b_X CLPA protein; AAA+, N-t 32.4 17 0.00059 35.4 1.9 22 214-235 490-511 (758)
317 3tui_C Methionine import ATP-b 32.4 18 0.00062 32.9 1.9 28 206-233 48-75 (366)
318 1g41_A Heat shock protein HSLU 32.2 17 0.00057 34.0 1.7 22 212-233 50-71 (444)
319 3b5x_A Lipid A export ATP-bind 32.1 17 0.00058 34.6 1.7 32 204-235 361-392 (582)
320 2j37_W Signal recognition part 31.7 19 0.00064 34.2 1.9 26 211-236 100-125 (504)
321 2i1q_A DNA repair and recombin 31.5 18 0.00062 31.2 1.7 24 211-234 97-120 (322)
322 1pzn_A RAD51, DNA repair and r 31.4 16 0.00054 32.6 1.3 27 209-235 128-154 (349)
323 1qvr_A CLPB protein; coiled co 31.4 23 0.00078 35.4 2.6 24 213-236 589-612 (854)
324 1mky_A Probable GTP-binding pr 31.4 16 0.00056 33.3 1.5 20 214-233 182-201 (439)
325 2qpt_A EH domain-containing pr 31.3 15 0.00051 35.0 1.2 23 212-234 65-87 (550)
326 2qag_C Septin-7; cell cycle, c 31.3 17 0.00056 33.6 1.4 19 215-233 34-52 (418)
327 2hjg_A GTP-binding protein ENG 31.1 17 0.00057 33.2 1.5 20 215-234 178-197 (436)
328 1lnz_A SPO0B-associated GTP-bi 31.1 17 0.00058 32.5 1.5 22 214-235 160-181 (342)
329 2geb_A Hypoxanthine-guanine ph 31.0 75 0.0026 25.3 5.3 29 136-164 97-128 (185)
330 3lda_A DNA repair protein RAD5 30.6 17 0.00058 33.3 1.4 23 210-232 176-198 (400)
331 3hvu_A Hypoxanthine phosphorib 30.6 84 0.0029 25.9 5.6 28 136-163 115-145 (204)
332 2x2e_A Dynamin-1; nitration, h 30.6 18 0.00063 31.9 1.6 24 210-234 30-53 (353)
333 1z6t_A APAF-1, apoptotic prote 30.5 19 0.00065 33.6 1.8 23 212-234 147-169 (591)
334 3h2y_A GTPase family protein; 30.5 15 0.00052 33.0 1.0 22 214-235 162-183 (368)
335 1v5w_A DMC1, meiotic recombina 30.4 23 0.00078 31.3 2.2 24 211-234 121-144 (343)
336 1yqt_A RNAse L inhibitor; ATP- 30.4 18 0.0006 34.4 1.5 24 212-235 312-335 (538)
337 2xxa_A Signal recognition part 30.1 39 0.0013 31.2 3.8 28 210-237 98-125 (433)
338 2l2q_A PTS system, cellobiose- 30.0 20 0.0007 26.4 1.5 23 137-159 4-26 (109)
339 3qq5_A Small GTP-binding prote 30.0 20 0.00069 33.0 1.8 21 214-234 36-56 (423)
340 1xzp_A Probable tRNA modificat 29.8 12 0.00042 35.1 0.3 21 215-235 246-266 (482)
341 2ffh_A Protein (FFH); SRP54, s 29.8 26 0.00089 32.4 2.5 27 211-237 97-123 (425)
342 2z43_A DNA repair and recombin 29.8 21 0.00071 31.1 1.8 23 211-233 106-128 (324)
343 1ypw_A Transitional endoplasmi 29.6 24 0.00083 35.1 2.4 29 208-236 507-535 (806)
344 1tue_A Replication protein E1; 29.3 23 0.00077 30.0 1.8 21 213-233 59-79 (212)
345 3bgw_A DNAB-like replicative h 28.9 19 0.00064 33.3 1.4 26 210-235 195-221 (444)
346 3b60_A Lipid A export ATP-bind 28.7 18 0.00061 34.4 1.2 31 205-235 362-392 (582)
347 2zr9_A Protein RECA, recombina 28.7 24 0.00084 31.4 2.1 21 212-232 61-81 (349)
348 3thx_B DNA mismatch repair pro 28.7 23 0.00078 36.2 2.1 39 200-238 659-699 (918)
349 3o7m_A Hypoxanthine phosphorib 28.2 85 0.0029 25.3 5.2 28 136-163 93-123 (186)
350 3ohp_A Hypoxanthine phosphorib 28.2 89 0.003 24.9 5.3 28 136-163 90-120 (177)
351 1qhl_A Protein (cell division 27.6 10 0.00035 32.0 -0.6 24 213-236 28-51 (227)
352 3qf4_A ABC transporter, ATP-bi 27.5 20 0.0007 34.2 1.4 31 205-235 362-392 (587)
353 2ywu_A Hypoxanthine-guanine ph 27.5 93 0.0032 24.9 5.3 28 136-163 94-124 (181)
354 3f9v_A Minichromosome maintena 27.3 18 0.0006 34.8 0.9 23 214-236 329-351 (595)
355 3ozx_A RNAse L inhibitor; ATP 27.3 21 0.00072 33.9 1.5 24 211-234 293-316 (538)
356 2yl4_A ATP-binding cassette SU 27.3 22 0.00075 33.9 1.6 30 205-234 363-392 (595)
357 1tvm_A PTS system, galactitol- 27.2 41 0.0014 24.9 2.8 22 137-158 21-43 (113)
358 1r6b_X CLPA protein; AAA+, N-t 27.2 22 0.00076 34.7 1.6 24 211-234 206-229 (758)
359 3bk7_A ABC transporter ATP-bin 27.2 21 0.00072 34.5 1.5 24 212-235 382-405 (607)
360 1ewq_A DNA mismatch repair pro 26.9 32 0.0011 34.3 2.8 38 201-239 566-603 (765)
361 2npi_A Protein CLP1; CLP1-PCF1 26.9 24 0.00082 32.9 1.8 28 209-236 135-162 (460)
362 4a82_A Cystic fibrosis transme 26.8 21 0.00073 33.9 1.4 29 206-234 361-389 (578)
363 2gk6_A Regulator of nonsense t 26.7 24 0.00083 33.8 1.8 21 212-232 195-215 (624)
364 3c5h_A Glucocorticoid receptor 26.6 20 0.0007 29.9 1.1 17 218-234 34-50 (255)
365 3czc_A RMPB; alpha/beta sandwi 26.0 58 0.002 23.9 3.5 25 138-162 19-48 (110)
366 1bif_A 6-phosphofructo-2-kinas 25.9 27 0.00093 32.1 1.9 23 212-234 39-61 (469)
367 1e2b_A Enzyme IIB-cellobiose; 25.9 42 0.0014 24.7 2.7 25 138-162 4-32 (106)
368 2vhj_A Ntpase P4, P4; non- hyd 25.7 30 0.001 31.1 2.1 22 214-235 125-146 (331)
369 1x6v_B Bifunctional 3'-phospho 25.7 28 0.00096 34.0 2.0 24 212-235 52-75 (630)
370 3thx_A DNA mismatch repair pro 25.1 38 0.0013 34.6 3.0 34 201-234 649-684 (934)
371 3hr8_A Protein RECA; alpha and 24.8 31 0.001 31.1 2.0 23 212-234 61-83 (356)
372 3qf4_B Uncharacterized ABC tra 24.7 24 0.00081 33.8 1.3 31 204-234 373-403 (598)
373 1yqt_A RNAse L inhibitor; ATP- 24.1 28 0.00097 32.9 1.7 25 209-233 44-68 (538)
374 2jgn_A DBX, DDX3, ATP-dependen 24.0 84 0.0029 24.7 4.3 30 133-162 42-71 (185)
375 2dpy_A FLII, flagellum-specifi 23.8 31 0.0011 31.9 1.9 28 207-234 152-179 (438)
376 1yfz_A Hypoxanthine-guanine ph 23.7 99 0.0034 24.9 4.8 29 136-164 117-148 (205)
377 1q57_A DNA primase/helicase; d 23.6 30 0.001 32.0 1.7 23 210-232 240-262 (503)
378 3szr_A Interferon-induced GTP- 23.6 32 0.0011 33.0 2.0 24 209-233 43-66 (608)
379 1qvr_A CLPB protein; coiled co 23.6 24 0.00083 35.2 1.1 22 214-235 193-214 (854)
380 3ux8_A Excinuclease ABC, A sub 23.4 29 0.00098 33.5 1.6 24 208-231 344-367 (670)
381 3bk7_A ABC transporter ATP-bin 23.1 30 0.001 33.4 1.7 25 209-233 114-138 (607)
382 1u0j_A DNA replication protein 23.1 28 0.00096 30.3 1.3 23 213-235 105-127 (267)
383 3j16_B RLI1P; ribosome recycli 22.9 31 0.0011 33.4 1.7 21 214-234 380-400 (608)
384 2b49_A Protein tyrosine phosph 22.8 81 0.0028 27.1 4.3 29 126-154 198-227 (287)
385 1tf7_A KAIC; homohexamer, hexa 22.7 28 0.00096 32.5 1.3 23 209-231 36-58 (525)
386 3cr8_A Sulfate adenylyltranfer 22.7 30 0.001 33.1 1.6 27 209-235 366-392 (552)
387 1vkr_A Mannitol-specific PTS s 22.7 50 0.0017 25.1 2.6 26 137-162 13-43 (125)
388 2a5y_B CED-4; apoptosis; HET: 22.5 35 0.0012 32.0 2.0 22 212-233 152-173 (549)
389 1tf7_A KAIC; homohexamer, hexa 22.3 29 0.001 32.4 1.4 23 212-234 281-303 (525)
390 2obl_A ESCN; ATPase, hydrolase 22.1 32 0.0011 30.7 1.5 27 208-234 67-93 (347)
391 4b3f_X DNA-binding protein smu 22.1 34 0.0012 32.9 1.8 21 211-231 204-224 (646)
392 1u94_A RECA protein, recombina 22.0 44 0.0015 29.9 2.5 22 212-233 63-84 (356)
393 4ad8_A DNA repair protein RECN 21.8 24 0.00081 33.0 0.6 22 212-233 60-81 (517)
394 3mmj_A MYO-inositol hexaphosph 21.7 1E+02 0.0034 27.5 4.7 33 121-153 194-230 (314)
395 3k1j_A LON protease, ATP-depen 21.7 32 0.0011 32.9 1.5 23 213-235 61-83 (604)
396 3b6e_A Interferon-induced heli 21.4 27 0.00093 27.3 0.8 16 214-229 50-65 (216)
397 4dcu_A GTP-binding protein ENG 21.0 34 0.0011 31.3 1.5 21 214-234 197-217 (456)
398 2iw3_A Elongation factor 3A; a 20.9 34 0.0012 35.3 1.6 26 207-232 694-719 (986)
399 3j16_B RLI1P; ribosome recycli 20.9 36 0.0012 32.9 1.7 25 209-233 100-124 (608)
400 1xp8_A RECA protein, recombina 20.5 43 0.0015 30.1 2.1 21 212-232 74-94 (366)
401 3vkw_A Replicase large subunit 20.3 44 0.0015 31.2 2.1 25 208-232 157-181 (446)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.85 E-value=1e-21 Score=151.57 Aligned_cols=95 Identities=17% Similarity=0.297 Sum_probs=78.2
Q ss_pred CCcccHHHHHHHHhC-CCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 48 VNYVNAEEAKNLIAV-ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~-~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
++.||++||++++.+ ++++|||||++.||+.||||||+|||+..+... ..
T Consensus 1 ~k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~--~~--------------------------- 51 (103)
T 3iwh_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDN--LN--------------------------- 51 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC--GG---------------------------
T ss_pred CCCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchhhh--hh---------------------------
Confidence 468999999997755 468999999999999999999999998776542 11
Q ss_pred HHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 127 VQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 127 ~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.++++++||+||++|.||..+++.|.+.|| + ++ +|.||+.+|...
T Consensus 52 ------~l~~~~~ivv~C~~G~rS~~aa~~L~~~G~-------~---------~~-~l~GG~~~W~~~ 96 (103)
T 3iwh_A 52 ------SFNKNEIYYIVCAGGVRSAKVVEYLEANGI-------D---------AV-NVEGGMHAWGDE 96 (103)
T ss_dssp ------GCCTTSEEEEECSSSSHHHHHHHHHHTTTC-------E---------EE-EETTHHHHHCSS
T ss_pred ------hhcCCCeEEEECCCCHHHHHHHHHHHHcCC-------C---------EE-EecChHHHHHHC
Confidence 245689999999999999999999998854 4 34 478999999554
No 2
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.84 E-value=2.4e-21 Score=147.22 Aligned_cols=95 Identities=16% Similarity=0.280 Sum_probs=78.7
Q ss_pred CCcccHHHHHHHHh-CCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 48 VNYVNAEEAKNLIA-VERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 48 ~~~Is~eeL~~ll~-~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
++.|+++|+.++++ +++.+|||||++.||+.||||||+|+|+..+.+. ..
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~--~~--------------------------- 51 (100)
T 3foj_A 1 MESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDN--LN--------------------------- 51 (100)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC--GG---------------------------
T ss_pred CCccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH--HH---------------------------
Confidence 35799999999884 5678999999999999999999999999766541 11
Q ss_pred HHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 127 VQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 127 ~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.++++++||+||++|.||..+++.|.+.|| ++..|+||+.+|...
T Consensus 52 ------~l~~~~~ivvyC~~g~rs~~a~~~L~~~G~-----------------~v~~l~GG~~~W~~~ 96 (100)
T 3foj_A 52 ------YFNDNETYYIICKAGGRSAQVVQYLEQNGV-----------------NAVNVEGGMDEFGDE 96 (100)
T ss_dssp ------GSCTTSEEEEECSSSHHHHHHHHHHHTTTC-----------------EEEEETTHHHHHCSS
T ss_pred ------hCCCCCcEEEEcCCCchHHHHHHHHHHCCC-----------------CEEEecccHHHHHHc
Confidence 245589999999999999999999998865 345688999999543
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.84 E-value=4.2e-21 Score=146.39 Aligned_cols=95 Identities=17% Similarity=0.309 Sum_probs=78.8
Q ss_pred CCcccHHHHHHHHh-CCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 48 VNYVNAEEAKNLIA-VERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 48 ~~~Is~eeL~~ll~-~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
++.|+++|+.++++ +++.+|||||++.||+.||||||+|+|+..+... ..
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~--~~--------------------------- 51 (103)
T 3eme_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDN--LN--------------------------- 51 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC--GG---------------------------
T ss_pred CCccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHH--HH---------------------------
Confidence 35799999999884 5678999999999999999999999999766431 11
Q ss_pred HHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 127 VQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 127 ~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.++++++||+||.+|.||..+++.|...|| ++.+|+||+.+|...
T Consensus 52 ------~l~~~~~iv~yC~~g~rs~~a~~~L~~~G~-----------------~v~~l~GG~~~W~~~ 96 (103)
T 3eme_A 52 ------SFNKNEIYYIVCAGGVRSAKVVEYLEANGI-----------------DAVNVEGGMHAWGDE 96 (103)
T ss_dssp ------GCCTTSEEEEECSSSSHHHHHHHHHHTTTC-----------------EEEEETTHHHHHCSS
T ss_pred ------hCCCCCeEEEECCCChHHHHHHHHHHHCCC-----------------CeEEeCCCHHHHHHC
Confidence 135589999999999999999999998865 345789999999544
No 4
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.83 E-value=3.3e-21 Score=148.84 Aligned_cols=93 Identities=22% Similarity=0.271 Sum_probs=77.9
Q ss_pred CCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHH
Q 025953 48 VNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFV 127 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~ 127 (245)
++.|+++|+.+++++ .+|||||++.||+.||||||+|+|+..+...
T Consensus 3 ~~~is~~el~~~l~~--~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~-------------------------------- 48 (108)
T 3gk5_A 3 YRSINAADLYENIKA--YTVLDVREPFELIFGSIANSINIPISELREK-------------------------------- 48 (108)
T ss_dssp CCEECHHHHHHTTTT--CEEEECSCHHHHTTCBCTTCEECCHHHHHHH--------------------------------
T ss_pred ccEeCHHHHHHHHcC--CEEEECCCHHHHhcCcCCCCEEcCHHHHHHH--------------------------------
Confidence 568999999998865 8999999999999999999999998654321
Q ss_pred HHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 128 QSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 128 ~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
...++++++||+||++|.||..+++.|.++|| ++..|+||+.+|...
T Consensus 49 ---~~~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~-----------------~v~~l~GG~~~W~~~ 95 (108)
T 3gk5_A 49 ---WKILERDKKYAVICAHGNRSAAAVEFLSQLGL-----------------NIVDVEGGIQSWIEE 95 (108)
T ss_dssp ---GGGSCTTSCEEEECSSSHHHHHHHHHHHTTTC-----------------CEEEETTHHHHHHHT
T ss_pred ---HHhCCCCCeEEEEcCCCcHHHHHHHHHHHcCC-----------------CEEEEcCcHHHHHHc
Confidence 11245689999999999999999999998865 346789999999665
No 5
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.82 E-value=1.3e-20 Score=149.74 Aligned_cols=111 Identities=22% Similarity=0.338 Sum_probs=90.2
Q ss_pred hccCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCC
Q 025953 44 IRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQN 123 (245)
Q Consensus 44 ~~~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~ 123 (245)
.......|+++|+.++++ ++.+|||||++.||+.||||||+|||+..+... + ..++
T Consensus 13 ~~~~~~~is~~e~~~~l~-~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~---~--------------------~~~~ 68 (129)
T 1tq1_A 13 ESRVPSSVSVTVAHDLLL-AGHRYLDVRTPEEFSQGHACGAINVPYMNRGAS---G--------------------MSKN 68 (129)
T ss_dssp CSCCCEEEEHHHHHHHHH-HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTT---T--------------------CCCT
T ss_pred hcCCCcccCHHHHHHHhc-CCCEEEECCCHHHHhcCCCCCcEECcHhhcccc---c--------------------ccCC
Confidence 345678899999999886 568999999999999999999999998665321 0 1224
Q ss_pred hHHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 124 PEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 124 ~~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
++|++.+...++++++|||||.+|.||..+++.|.+. ||+ ++..|+||+.+|...
T Consensus 69 ~~~~~~~~~~l~~~~~ivvyC~~G~rs~~aa~~L~~~-------G~~---------~v~~l~GG~~~W~~~ 123 (129)
T 1tq1_A 69 TDFLEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHA-------GFT---------GVKDIVGGYSAWAKN 123 (129)
T ss_dssp TTHHHHHTTTCCTTSSEEEEESSCSHHHHHHHHHHHH-------HCC---------SEEEEECCHHHHHHH
T ss_pred HHHHHHHHhhCCCCCeEEEECCCCcHHHHHHHHHHHc-------CCC---------CeEEeCCcHHHHHhC
Confidence 5677776666888999999999999999999999987 555 677899999999543
No 6
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.81 E-value=4.9e-20 Score=147.39 Aligned_cols=111 Identities=21% Similarity=0.322 Sum_probs=86.6
Q ss_pred ccCCCcccHHHHHHHHhC--CCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCC
Q 025953 45 RADVNYVNAEEAKNLIAV--ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQ 122 (245)
Q Consensus 45 ~~~~~~Is~eeL~~ll~~--~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~ 122 (245)
...+..|+++|+.+++++ ++.+|||||++.||+.||||||+|||+..+.... ..+
T Consensus 19 ~~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~-----------------------~~~ 75 (139)
T 3d1p_A 19 VSNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAF-----------------------ALD 75 (139)
T ss_dssp -CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGG-----------------------GSC
T ss_pred CCCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhc-----------------------cCC
Confidence 346788999999999863 5789999999999999999999999998764310 011
Q ss_pred ChHHHHHhhh-cCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 123 NPEFVQSVKS-QFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 123 ~~~f~~~l~~-~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.++|.+.+.. .++++++||+||.+|.||..+++.|.++ ||+ ++..|+||+.+|...
T Consensus 76 ~~~~~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~-------G~~---------~v~~l~GG~~~W~~~ 132 (139)
T 3d1p_A 76 PLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSH-------GYS---------NTSLYPGSMNDWVSH 132 (139)
T ss_dssp HHHHHHHHSSCCCCTTSEEEEECSSSHHHHHHHHHHHTT-------TCC---------SEEECTTHHHHHHHT
T ss_pred HHHHHHHHhccCCCCCCeEEEECCCCchHHHHHHHHHHc-------CCC---------CeEEeCCcHHHHHHc
Confidence 1334444432 2567899999999999999999999987 455 678899999999544
No 7
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.81 E-value=7.5e-21 Score=146.15 Aligned_cols=96 Identities=13% Similarity=0.235 Sum_probs=80.3
Q ss_pred CCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 47 DVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 47 ~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
.++.|+++|+.+++++++.+|||||++.||..||||||+|||+..+.. +
T Consensus 3 ~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~-------------------------------~ 51 (108)
T 1gmx_A 3 QFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGA-------------------------------F 51 (108)
T ss_dssp SCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCHHHHHH-------------------------------H
T ss_pred cccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCHHHHHH-------------------------------H
Confidence 356799999999998778999999999999999999999999754322 1
Q ss_pred HHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccccccc
Q 025953 127 VQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 127 ~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
+ ..++++++||+||.+|.||..+++.|...| |+ ++.+|+||+.+|..
T Consensus 52 ~----~~l~~~~~ivvyc~~g~rs~~a~~~L~~~G-------~~---------~v~~l~GG~~~W~~ 98 (108)
T 1gmx_A 52 M----RDNDFDTPVMVMCYHGNSSKGAAQYLLQQG-------YD---------VVYSIDGGFEAWQR 98 (108)
T ss_dssp H----HHSCTTSCEEEECSSSSHHHHHHHHHHHHT-------CS---------SEEEETTHHHHHHH
T ss_pred H----HhcCCCCCEEEEcCCCchHHHHHHHHHHcC-------Cc---------eEEEecCCHHHHHH
Confidence 1 125668999999999999999999999874 45 67789999999943
No 8
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.81 E-value=1.3e-20 Score=152.43 Aligned_cols=112 Identities=17% Similarity=0.202 Sum_probs=80.5
Q ss_pred cccHHHHHHHHhC--CCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHH
Q 025953 50 YVNAEEAKNLIAV--ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFV 127 (245)
Q Consensus 50 ~Is~eeL~~ll~~--~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~ 127 (245)
.||++|+.++++. ++++|||||++.||..||||||+|||+..+..
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~--------------------------------- 47 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVD--------------------------------- 47 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHH---------------------------------
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHH---------------------------------
Confidence 4899999999874 35899999999999999999999999865432
Q ss_pred HHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc---ccccc---cc
Q 025953 128 QSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR---ASREV---VP 201 (245)
Q Consensus 128 ~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~---~~ 201 (245)
.+...++++++|||||.+|.||..+++.|...| |+ ++.+|+||+.+|... ..+.. ++
T Consensus 48 -~~~~~l~~~~~ivvyC~~g~rs~~aa~~L~~~G-------~~---------~v~~l~GG~~~W~~~g~p~~~~~~~~~~ 110 (141)
T 3ilm_A 48 -RASSSLEKSRDIYVYGAGDEQTSQAVNLLRSAG-------FE---------HVSELKGGLAAWKAIGGPTEGIIESRTP 110 (141)
T ss_dssp -HHHTTSCTTSEEEEECSSHHHHHHHHHHHHHTT-------CC---------SEEECTTHHHHHHHTTCCEEEEC-----
T ss_pred -HHHhcCCCCCeEEEEECCChHHHHHHHHHHHcC-------CC---------CEEEecCHHHHHHHCCCCcccCCCCCCC
Confidence 111235568999999999999999999999874 45 678899999999765 22222 44
Q ss_pred cccccccccC
Q 025953 202 VVPCELVLKI 211 (245)
Q Consensus 202 ~~~~~~~~~~ 211 (245)
+.|++|....
T Consensus 111 ~~~~~~~~~~ 120 (141)
T 3ilm_A 111 AGADDYNVVS 120 (141)
T ss_dssp --------CH
T ss_pred CCCCcccccc
Confidence 5666665543
No 9
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.80 E-value=1.6e-20 Score=153.72 Aligned_cols=123 Identities=16% Similarity=0.129 Sum_probs=86.9
Q ss_pred cccchhhhhhhhhccCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccC
Q 025953 32 VSGKSICRRNLKIRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFS 111 (245)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~ 111 (245)
.++.++..+.......+..|+++|+.+++++++.+|||||++.||+.||||||+|||+..+.. ..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~--~~------------- 75 (152)
T 1t3k_A 11 SSGLVPRGSHMAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDD--KI------------- 75 (152)
T ss_dssp ----------CCCCSSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSST--TH-------------
T ss_pred ccccccccchhhhcCCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHHH--HH-------------
Confidence 445565566666667788999999999887678999999999999999999999999876543 11
Q ss_pred ccccCCCCCCCChHHHHHhhhcCCCCCeEEEEcC-CChhHHHHHHHHHHcCCCc-eecccccCCCCcccccccccccccc
Q 025953 112 GLFFGLPFTKQNPEFVQSVKSQFSPESKLLVVCQ-EGLRYIRFCRFHRAARCWK-SWFGYSSRQDFSCTWNCAYLCISIH 189 (245)
Q Consensus 112 ~l~~g~~~~~~~~~f~~~l~~~l~~d~~VVVyC~-~G~RS~~aa~~L~~~G~~~-~~~Gy~~~~~~~~~~~~~~l~~~~~ 189 (245)
+++...++++++|||||+ +|.||..++..|.+.-.|. ...||+ ++.+|+||+.
T Consensus 76 ----------------~~l~~~~~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~---------~V~~L~GG~~ 130 (152)
T 1t3k_A 76 ----------------SHLVQNVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIK---------NIMILERGFN 130 (152)
T ss_dssp ----------------HHHHHTCCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSS---------EEEEESSTTH
T ss_pred ----------------HHHHHhcCCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCC---------cEEEEcCCHH
Confidence 122223466899999999 9999999998885410000 013666 7889999999
Q ss_pred ccccc
Q 025953 190 HFLPR 194 (245)
Q Consensus 190 ~~~~~ 194 (245)
+|...
T Consensus 131 ~W~~~ 135 (152)
T 1t3k_A 131 GWEAS 135 (152)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99654
No 10
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.80 E-value=3.3e-20 Score=142.60 Aligned_cols=91 Identities=19% Similarity=0.227 Sum_probs=67.8
Q ss_pred HHHHHHHh--CCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHHHhh
Q 025953 54 EEAKNLIA--VERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQSVK 131 (245)
Q Consensus 54 eeL~~ll~--~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~~l~ 131 (245)
+||+++++ +++++|||||++.||..||||||+|||+..+.. .+.
T Consensus 1 eel~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~----------------------------------~~~ 46 (106)
T 3hix_A 1 MVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVD----------------------------------RAS 46 (106)
T ss_dssp ------------CCEEEECSCHHHHHTCEETTCEECCGGGHHH----------------------------------HHH
T ss_pred ChHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHH----------------------------------HHH
Confidence 46777776 346899999999999999999999999865432 111
Q ss_pred hcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 132 SQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 132 ~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
..++++++||+||.+|.||..+++.|...| |+ ++.+|+||+.+|...
T Consensus 47 ~~l~~~~~ivvyc~~g~rs~~a~~~L~~~G-------~~---------~v~~l~GG~~~W~~~ 93 (106)
T 3hix_A 47 SSLEKSRDIYVYGAGDEQTSQAVNLLRSAG-------FE---------HVSELKGGLAAWKAI 93 (106)
T ss_dssp HHSCTTSCEEEECSSHHHHHHHHHHHHHTT-------CS---------CEEECTTHHHHHHHT
T ss_pred hcCCCCCeEEEEECCCChHHHHHHHHHHcC-------Cc---------CEEEecCCHHHHHHC
Confidence 235668999999999999999999999884 45 678899999999665
No 11
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.80 E-value=4.4e-20 Score=138.68 Aligned_cols=91 Identities=21% Similarity=0.178 Sum_probs=72.5
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHH
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQ 128 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~ 128 (245)
+.|+++|+.+++++ +.+|||||++.||+.||||||+|+|+..+... .
T Consensus 2 ~~is~~~l~~~~~~-~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~--~------------------------------ 48 (94)
T 1wv9_A 2 RKVRPEELPALLEE-GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKG--E------------------------------ 48 (94)
T ss_dssp CEECGGGHHHHHHT-TCEEEECCCC--CCSCCSSCCEECCHHHHTTT--C------------------------------
T ss_pred CcCCHHHHHHHHHC-CCEEEECCCHHHHhcccCCCCEECCHHHHHHH--H------------------------------
Confidence 56999999998876 78999999999999999999999998765431 0
Q ss_pred HhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccccccc
Q 025953 129 SVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 129 ~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
..+++ ++||+||++|.||..+++.|.+.||. +..|+||+.+|..
T Consensus 49 ---~~l~~-~~ivvyC~~g~rs~~a~~~L~~~G~~-----------------v~~l~GG~~~W~~ 92 (94)
T 1wv9_A 49 ---HGLPR-RPLLLVCEKGLLSQVAALYLEAEGYE-----------------AMSLEGGLQALTQ 92 (94)
T ss_dssp ---CCCCS-SCEEEECSSSHHHHHHHHHHHHHTCC-----------------EEEETTGGGCC--
T ss_pred ---HhCCC-CCEEEEcCCCChHHHHHHHHHHcCCc-----------------EEEEcccHHHHHh
Confidence 12456 89999999999999999999998662 3467888899943
No 12
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.79 E-value=4.5e-20 Score=148.37 Aligned_cols=100 Identities=20% Similarity=0.258 Sum_probs=83.4
Q ss_pred cCCCcccHHHHHHHHh-CCCcEEEecCChhHHhh-cC--CCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCC
Q 025953 46 ADVNYVNAEEAKNLIA-VERYAVLDVRDNSQYNR-AH--IKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTK 121 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~-~~~~vLIDVR~~~Ey~~-GH--IPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~ 121 (245)
..+..|+++|+.++++ +++.+|||||++.||+. || ||||+|||+..+... ..
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~---~~--------------------- 75 (137)
T 1qxn_A 20 ADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL---LA--------------------- 75 (137)
T ss_dssp HSSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH---HH---------------------
T ss_pred ccCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH---Hh---------------------
Confidence 5678899999999997 67799999999999999 99 999999998765420 00
Q ss_pred CChHHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 122 QNPEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 122 ~~~~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
...++++++|||||.+|.||..+++.|... ||+ ++..|+||+.+|...
T Consensus 76 ---------~~~l~~~~~ivvyC~~G~rS~~aa~~L~~~-------G~~---------~v~~l~GG~~~W~~~ 123 (137)
T 1qxn_A 76 ---------KSGLDPEKPVVVFCKTAARAALAGKTLREY-------GFK---------TIYNSEGGMDKWLEE 123 (137)
T ss_dssp ---------HHCCCTTSCEEEECCSSSCHHHHHHHHHHH-------TCS---------CEEEESSCHHHHHHT
T ss_pred ---------hccCCCCCeEEEEcCCCcHHHHHHHHHHHc-------CCc---------ceEEEcCcHHHHHHC
Confidence 012456899999999999999999999987 455 678899999999655
No 13
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.79 E-value=3.7e-20 Score=144.80 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=82.7
Q ss_pred CcccHHHHHHHHhCC-CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHH
Q 025953 49 NYVNAEEAKNLIAVE-RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFV 127 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~-~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~ 127 (245)
+.|+++|+.++++++ +.+|||||++.||+.||||||+|||+..+... ...+... .++.+
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~--~~~~~~~------------------~~~~l 60 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERR--DAESLKL------------------LKEAI 60 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTT--CHHHHHH------------------HHHHH
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhh--hhhhHHH------------------HHHHH
Confidence 368999999998765 58999999999999999999999999776542 1111100 00001
Q ss_pred HHhhh--cCCCCCeEEEEcCCChhHHHHHHHHHHc-CCCceecccccCCCCccccccccccccccccccc
Q 025953 128 QSVKS--QFSPESKLLVVCQEGLRYIRFCRFHRAA-RCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 128 ~~l~~--~l~~d~~VVVyC~~G~RS~~aa~~L~~~-G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
..... ..+++++||+||++|.||..+++.|..+ |+.+ .||. ++..|+||+.+|...
T Consensus 61 ~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~--~G~~---------~v~~l~GG~~~W~~~ 119 (127)
T 3i2v_A 61 WEEKQGTQEGAAVPIYVICKLGNDSQKAVKILQSLSAAQE--LDPL---------TVRDVVGGLMAWAAK 119 (127)
T ss_dssp HHHHTTC---CCEEEEEECSSSSHHHHHHHHHHHHHHTTS--SSCE---------EEEEETTHHHHHHHH
T ss_pred hhhcccccCCCCCeEEEEcCCCCcHHHHHHHHHHhhcccc--CCCc---------eEEEecCCHHHHHHh
Confidence 11011 1234669999999999999999999998 4432 2555 889999999999654
No 14
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.79 E-value=8.9e-20 Score=145.53 Aligned_cols=106 Identities=18% Similarity=0.236 Sum_probs=83.6
Q ss_pred cCCCcccHHHHHHHHh--CCCcEEEecCChhHHhh-cCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCC
Q 025953 46 ADVNYVNAEEAKNLIA--VERYAVLDVRDNSQYNR-AHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQ 122 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~--~~~~vLIDVR~~~Ey~~-GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~ 122 (245)
..+..|+++|+.++++ +++.+|||||++.||.. ||||||+|||+..+....+...
T Consensus 19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~---------------------- 76 (139)
T 2hhg_A 19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQS---------------------- 76 (139)
T ss_dssp TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTS----------------------
T ss_pred HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccc----------------------
Confidence 5678899999999998 56789999999999999 9999999999876542100000
Q ss_pred ChHHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 123 NPEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 123 ~~~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
+.+ ...++++++|||||++|.||..+++.|... ||+ ++..|+||+.+|...
T Consensus 77 -~~~----~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~-------G~~---------~v~~l~GG~~~W~~~ 127 (139)
T 2hhg_A 77 -PYA----KPIFQEDKKFVFYCAGGLRSALAAKTAQDM-------GLK---------PVAHIEGGFGAWRDA 127 (139)
T ss_dssp -TTC----CGGGGSSSEEEEECSSSHHHHHHHHHHHHH-------TCC---------SEEEETTHHHHHHHT
T ss_pred -hhh----hccCCCCCeEEEECCCChHHHHHHHHHHHc-------CCC---------CeEEecCCHHHHHHC
Confidence 000 112456899999999999999999999987 455 678899999999654
No 15
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.79 E-value=1.3e-20 Score=148.24 Aligned_cols=125 Identities=18% Similarity=0.351 Sum_probs=81.6
Q ss_pred CCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCC-hH
Q 025953 47 DVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQN-PE 125 (245)
Q Consensus 47 ~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~-~~ 125 (245)
.++.|+++|+.+ .++.+|||||++.||..||||||+|||+..+......+.+.+.... ..+...|..+..++ ++
T Consensus 3 ~~~~i~~~el~~---~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 77 (134)
T 3g5j_A 3 AMSVIKIEKALK---LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGK--HEAIQKGFDYVSYKLKD 77 (134)
T ss_dssp --CEECHHHHTT---CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCH--HHHHHHHHHHHGGGHHH
T ss_pred CccccCHHHHHh---cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecCh--hHHHhcccccccccHHH
Confidence 367899999876 5689999999999999999999999999765432111111110000 00001111111112 33
Q ss_pred HHHHhhhcCCCC-CeEEEEc-CCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 126 FVQSVKSQFSPE-SKLLVVC-QEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 126 f~~~l~~~l~~d-~~VVVyC-~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
+.+.+.. ++++ ++||+|| .+|.||..+++.|+.+|| ++.+|+||+.+|...
T Consensus 78 ~~~~~~~-~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-----------------~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 78 IYLQAAE-LALNYDNIVIYCARGGMRSGSIVNLLSSLGV-----------------NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHHH-HHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-----------------CCEEETTHHHHHHHH
T ss_pred HHHHHHH-hccCCCeEEEEECCCChHHHHHHHHHHHcCC-----------------ceEEEeCcHHHHHHH
Confidence 4444333 4667 9999999 599999999999998865 356788999999543
No 16
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.78 E-value=3.3e-19 Score=144.61 Aligned_cols=95 Identities=18% Similarity=0.159 Sum_probs=78.5
Q ss_pred CcccHHHHHHHHhCC--CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 49 NYVNAEEAKNLIAVE--RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~--~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
..|+++|+.++++++ +++|||||++.||..||||||+|||+..+... ..
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~-~~---------------------------- 66 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINED-TT---------------------------- 66 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTT-TT----------------------------
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHH-HH----------------------------
Confidence 468999999998765 78999999999999999999999999776531 00
Q ss_pred HHHhhhcCCCCCeEEEEcCCC--hhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 127 VQSVKSQFSPESKLLVVCQEG--LRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 127 ~~~l~~~l~~d~~VVVyC~~G--~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
..++++++|||||.+| .||..+++.|...|| ++.+|+||+.+|...
T Consensus 67 -----~~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-----------------~v~~l~GG~~~W~~~ 114 (144)
T 3nhv_A 67 -----KRLSKEKVIITYCWGPACNGATKAAAKFAQLGF-----------------RVKELIGGIEYWRKE 114 (144)
T ss_dssp -----TTCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-----------------EEEEEESHHHHHHHT
T ss_pred -----hhCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-----------------eEEEeCCcHHHHHHC
Confidence 1245589999999988 799999999998865 346788999999655
No 17
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.78 E-value=6.6e-19 Score=154.84 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=97.7
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCCh-HHH
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNP-EFV 127 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~-~f~ 127 (245)
..|+++|+.+++++++.+|||||++.||..||||||+|+|+..+..... ..+...+.+ +|.
T Consensus 9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~------------------~~~~~~~~~~~~~ 70 (271)
T 1e0c_A 9 LVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQP------------------PAPGLQPPREQLE 70 (271)
T ss_dssp SEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCT------------------TCTTSCCCHHHHH
T ss_pred ceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCC------------------CCCCCCCCHHHHH
Confidence 4799999999987778999999999999999999999999987654211 011234454 455
Q ss_pred HHhhhc-CCCCCeEEEEcCCCh-hHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc---cccccccc
Q 025953 128 QSVKSQ-FSPESKLLVVCQEGL-RYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR---ASREVVPV 202 (245)
Q Consensus 128 ~~l~~~-l~~d~~VVVyC~~G~-RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~ 202 (245)
+.+.+. ++++++|||||++|. ||.++++.|... ||+ ++.+|+||+.+|... .+++...+
T Consensus 71 ~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~-------G~~---------~v~~L~GG~~~w~~~g~p~~~~~~~~ 134 (271)
T 1e0c_A 71 SLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVI-------GQQ---------RYHYLNGGLTAWLAEDRPLSRELPAP 134 (271)
T ss_dssp HHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHT-------TCC---------CEEEETTHHHHHHHTTCCCBCCCCCC
T ss_pred HHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHc-------CCC---------CeEEecCCHHHHHHcCCCccCCCCCC
Confidence 555554 788999999999877 999999999987 555 678999999999665 34444455
Q ss_pred cccccccc
Q 025953 203 VPCELVLK 210 (245)
Q Consensus 203 ~~~~~~~~ 210 (245)
.+++|...
T Consensus 135 ~~~~~~~~ 142 (271)
T 1e0c_A 135 AGGPVALS 142 (271)
T ss_dssp CCSCCCCC
T ss_pred CCCCcccc
Confidence 56666543
No 18
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.78 E-value=4.7e-19 Score=143.58 Aligned_cols=105 Identities=14% Similarity=0.199 Sum_probs=78.6
Q ss_pred CCcccHHHHHHHHhC-CCcEEEecCChhHHhh-cCC------CCeEeeCCccccCCCcchhhhhhhcccccCccccCCCC
Q 025953 48 VNYVNAEEAKNLIAV-ERYAVLDVRDNSQYNR-AHI------KSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 119 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~-~~~vLIDVR~~~Ey~~-GHI------PGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~ 119 (245)
++.|+++|+.+++++ ++.+|||||++.||+. ||| |||+|||+.. ...
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~~------------------------ 58 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SDG------------------------ 58 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TTS------------------------
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-ccc------------------------
Confidence 457999999998874 6889999999999997 999 9999999876 221
Q ss_pred CCCChHHHHHhhhc-----CCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 120 TKQNPEFVQSVKSQ-----FSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 120 ~~~~~~f~~~l~~~-----l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
..+++|.+++.+. ++++++|||||++|.||..+++.|..+|| + ++..|+||+.+|...
T Consensus 59 -~~~~~~~~~l~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~-------~---------~v~~l~GG~~~w~~~ 121 (148)
T 2fsx_A 59 -THNDNFLAELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGI-------T---------PAYNVLDGFEGHLDA 121 (148)
T ss_dssp -CBCTTHHHHHHHHCC-------CCEEEECSSSSTHHHHHHHHHHTTC-------C---------SEEEETTTTTCCCCT
T ss_pred -ccCHHHHHHHHHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCC-------c---------ceEEEcCChhhhhhh
Confidence 0123444454443 37789999999999999999999998855 4 566677777666433
No 19
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.76 E-value=2.3e-19 Score=138.67 Aligned_cols=92 Identities=18% Similarity=0.288 Sum_probs=73.2
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHH
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQ 128 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~ 128 (245)
..|+++|+ ++++.+|||||++.||+.||||||+|+|+..+... ...
T Consensus 5 ~~is~~el----~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~--~~~---------------------------- 50 (110)
T 2k0z_A 5 YAISLEEV----NFNDFIVVDVRELDEYEELHLPNATLISVNDQEKL--ADF---------------------------- 50 (110)
T ss_dssp TEEETTTC----CGGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHH--HHH----------------------------
T ss_pred eeeCHHHh----ccCCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHH--HHh----------------------------
Confidence 45777776 24578999999999999999999999998765431 000
Q ss_pred HhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 129 SVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 129 ~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
..++++++||+||++|.||..+++.|...| |+ + .+|+||+.+|...
T Consensus 51 ---~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G-------~~---------~-~~l~GG~~~W~~~ 96 (110)
T 2k0z_A 51 ---LSQHKDKKVLLHCRAGRRALDAAKSMHELG-------YT---------P-YYLEGNVYDFEKY 96 (110)
T ss_dssp ---HHSCSSSCEEEECSSSHHHHHHHHHHHHTT-------CC---------C-EEEESCGGGTTTT
T ss_pred ---cccCCCCEEEEEeCCCchHHHHHHHHHHCC-------CC---------E-EEecCCHHHHHHC
Confidence 124568999999999999999999999874 45 5 6789999999654
No 20
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.76 E-value=2.7e-18 Score=151.83 Aligned_cols=127 Identities=16% Similarity=0.171 Sum_probs=96.6
Q ss_pred CcccHHHHHHHHhCCCcEEEecC----------ChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCC
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVR----------DNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLP 118 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR----------~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~ 118 (245)
..|+++|+.+++++++++||||| ++.||..||||||+|+|+..+..... ..+
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~------------------~~~ 65 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTS------------------PLP 65 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSS------------------SSS
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCC------------------CCC
Confidence 56999999999877789999999 78899999999999999986654211 011
Q ss_pred CCCCC-hHHHHHhhhc-CCCCCeEEEEcCCChh-HHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc-
Q 025953 119 FTKQN-PEFVQSVKSQ-FSPESKLLVVCQEGLR-YIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR- 194 (245)
Q Consensus 119 ~~~~~-~~f~~~l~~~-l~~d~~VVVyC~~G~R-S~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~- 194 (245)
...|+ ++|.+.+.+. ++++++|||||.+|.| |.++++.|..+ ||+ ++.+|+||+.+|...
T Consensus 66 ~~~~~~~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~-------G~~---------~v~~l~GG~~~W~~~g 129 (280)
T 1urh_A 66 HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTF-------GVE---------KVSILGGGLAGWQRDD 129 (280)
T ss_dssp SCCCCHHHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHT-------TCS---------CEEEETTHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHc-------CCC---------CEEEecCCHHHHHHCC
Confidence 23344 4555555555 6889999999999988 99999999987 556 788999999999665
Q ss_pred --ccccccccccccccc
Q 025953 195 --ASREVVPVVPCELVL 209 (245)
Q Consensus 195 --~~~~~~~~~~~~~~~ 209 (245)
..++.+.+.|++|..
T Consensus 130 ~p~~~~~~~~~~~~~~~ 146 (280)
T 1urh_A 130 LLLEEGAVELPEGEFNA 146 (280)
T ss_dssp CCCBBSCCCCCCCCCCC
T ss_pred CcccCCCCCCCCCcccc
Confidence 344444455555543
No 21
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.75 E-value=3.3e-19 Score=140.61 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=77.7
Q ss_pred CCcccHHHHHHHHhCC--CcEEEecCChhHH-hhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCCh
Q 025953 48 VNYVNAEEAKNLIAVE--RYAVLDVRDNSQY-NRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNP 124 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~~--~~vLIDVR~~~Ey-~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~ 124 (245)
...|+++|+.++++++ +.+|||||++.|| ..||||||+|||+..+...
T Consensus 14 ~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~----------------------------- 64 (124)
T 3flh_A 14 SLYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATR----------------------------- 64 (124)
T ss_dssp TTEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHH-----------------------------
T ss_pred cceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHH-----------------------------
Confidence 4679999999998764 4899999999998 9999999999998654321
Q ss_pred HHHHHhhhcCCCCCeEEEEcCCChh--HHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 125 EFVQSVKSQFSPESKLLVVCQEGLR--YIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 125 ~f~~~l~~~l~~d~~VVVyC~~G~R--S~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
...++++++||+||.+|.| |..+++.|...|| ++.+|+||+.+|...
T Consensus 65 ------~~~l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~-----------------~v~~l~GG~~~W~~~ 113 (124)
T 3flh_A 65 ------IGELDPAKTYVVYDWTGGTTLGKTALLVLLSAGF-----------------EAYELAGALEGWKGM 113 (124)
T ss_dssp ------GGGSCTTSEEEEECSSSSCSHHHHHHHHHHHHTC-----------------EEEEETTHHHHHHHT
T ss_pred ------HhcCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-----------------eEEEeCCcHHHHHHc
Confidence 1124568999999999999 8999999998865 245688999999554
No 22
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.73 E-value=8.8e-18 Score=134.05 Aligned_cols=87 Identities=13% Similarity=0.143 Sum_probs=68.9
Q ss_pred CCcccHHHHHHHHh-CCCcEEEecCChhHHhh-cCC------CCeEeeCCccccCCCcchhhhhhhcccccCccccCCCC
Q 025953 48 VNYVNAEEAKNLIA-VERYAVLDVRDNSQYNR-AHI------KSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 119 (245)
Q Consensus 48 ~~~Is~eeL~~ll~-~~~~vLIDVR~~~Ey~~-GHI------PGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~ 119 (245)
...|+++|+.++++ +++.+|||||++.||+. +|+ |||+|||+..+.
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~-------------------------- 57 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGED-------------------------- 57 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGG--------------------------
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeeccccc--------------------------
Confidence 46799999999887 56789999999999986 333 799999975531
Q ss_pred CCCChHHHHHhhhcC--CCCCeEEEEcCCChhHHHHHHHHHHcCCC
Q 025953 120 TKQNPEFVQSVKSQF--SPESKLLVVCQEGLRYIRFCRFHRAARCW 163 (245)
Q Consensus 120 ~~~~~~f~~~l~~~l--~~d~~VVVyC~~G~RS~~aa~~L~~~G~~ 163 (245)
+++|.+++...+ +++++|||||++|.||..++..|.++||.
T Consensus 58 ---~~~~~~~l~~~~~~~~~~~ivv~C~sG~RS~~aa~~L~~~G~~ 100 (134)
T 1vee_A 58 ---KPGFLKKLSLKFKDPENTTLYILDKFDGNSELVAELVALNGFK 100 (134)
T ss_dssp ---HHHHHHHHHTTCSCGGGCEEEEECSSSTTHHHHHHHHHHHTCS
T ss_pred ---ChhHHHHHHHHhCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCc
Confidence 133445554443 57899999999999999999999998664
No 23
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.73 E-value=4.1e-18 Score=154.56 Aligned_cols=126 Identities=10% Similarity=0.123 Sum_probs=95.6
Q ss_pred CCcccHHHHHHHHhCCCcEEEecCChhH-HhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCC-hH
Q 025953 48 VNYVNAEEAKNLIAVERYAVLDVRDNSQ-YNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQN-PE 125 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~~~~vLIDVR~~~E-y~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~-~~ 125 (245)
...|+++|+.+++++++++|||||++.| |..||||||+|+|+......... ...++ ++
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~--------------------~~~~~~~~ 98 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRV--------------------RDYINGEQ 98 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSS--------------------SSBCCHHH
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcc--------------------cCCCCHHH
Confidence 4579999999999888899999999876 99999999999997532221010 12234 34
Q ss_pred HHHHhhhc-CCCCCeEEEEcCCCh-hHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc---cccccc
Q 025953 126 FVQSVKSQ-FSPESKLLVVCQEGL-RYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR---ASREVV 200 (245)
Q Consensus 126 f~~~l~~~-l~~d~~VVVyC~~G~-RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~ 200 (245)
|.+.+.+. ++++++|||||++|. ||.+++++|+.+ ||+ ++.+|+||+.+|... .+++.+
T Consensus 99 ~~~~l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~-------G~~---------~V~~L~GG~~~W~~~g~p~~~~~~ 162 (318)
T 3hzu_A 99 FAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLF-------GHA---------DVRLLNGGRDLWLAERRETTLDVP 162 (318)
T ss_dssp HHHHHHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHT-------TCS---------CEEEETTHHHHHHHTTCCCBCCCC
T ss_pred HHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHc-------CCC---------ceEEccCCHHHHhhcCCCcccCCC
Confidence 55555555 788999999999776 999999999987 555 788999999999766 445555
Q ss_pred ccccccccc
Q 025953 201 PVVPCELVL 209 (245)
Q Consensus 201 ~~~~~~~~~ 209 (245)
.+.+.+|..
T Consensus 163 ~~~~~~~~~ 171 (318)
T 3hzu_A 163 TKTCTGYPV 171 (318)
T ss_dssp CCCCCCCCC
T ss_pred CCCCCcccc
Confidence 556666654
No 24
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.73 E-value=2.4e-17 Score=147.31 Aligned_cols=128 Identities=15% Similarity=0.137 Sum_probs=95.8
Q ss_pred CCcccHHHHHHHHhC----CCcEEEecC--------ChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCcccc
Q 025953 48 VNYVNAEEAKNLIAV----ERYAVLDVR--------DNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFF 115 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~----~~~vLIDVR--------~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~ 115 (245)
...|+++|+.+++++ ++++||||| ++.||..||||||+|+|+..+.....
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~------------------ 68 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKAS------------------ 68 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTS------------------
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCC------------------
Confidence 457999999999976 578999999 68999999999999999976543210
Q ss_pred CCCCCCCC-hHHHHHhhhc-CCCCCeEEEEcCC--Chh-HHHHHHHHHHcCCCceecccccCCCCccccccccccccccc
Q 025953 116 GLPFTKQN-PEFVQSVKSQ-FSPESKLLVVCQE--GLR-YIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHH 190 (245)
Q Consensus 116 g~~~~~~~-~~f~~~l~~~-l~~d~~VVVyC~~--G~R-S~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~ 190 (245)
..+...|+ ++|.+.+.+. ++++++|||||.+ |.+ |.+++++|+.+ ||+ ++.+|+||+.+
T Consensus 69 ~~~~~lp~~~~~~~~l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~-------G~~---------~V~~L~GG~~~ 132 (296)
T 1rhs_A 69 PYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVF-------GHR---------TVSVLNGGFRN 132 (296)
T ss_dssp SSSSCCCCHHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHT-------TCC---------CEEEETTHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHc-------CCC---------cEEEcCCCHHH
Confidence 01123445 3455555554 6889999999998 876 88999999987 555 78899999999
Q ss_pred cccc---ccccccccccccccc
Q 025953 191 FLPR---ASREVVPVVPCELVL 209 (245)
Q Consensus 191 ~~~~---~~~~~~~~~~~~~~~ 209 (245)
|... .+++.+.+.|.+|..
T Consensus 133 W~~~g~p~~~~~~~~~~~~~~~ 154 (296)
T 1rhs_A 133 WLKEGHPVTSEPSRPEPAIFKA 154 (296)
T ss_dssp HHHTTCCCBCSCCCCCCCCCCC
T ss_pred HHHcCCccccCCCCCCCCCccc
Confidence 9665 344444555666654
No 25
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.72 E-value=9e-18 Score=149.79 Aligned_cols=104 Identities=17% Similarity=0.263 Sum_probs=83.3
Q ss_pred cCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChH
Q 025953 46 ADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPE 125 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~ 125 (245)
...+.|+++|+.+++++++++|||||++.||+.||||||+|+|+..+.+. + +
T Consensus 119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~--~--------------------------~ 170 (265)
T 4f67_A 119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFREF--P--------------------------D 170 (265)
T ss_dssp CTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGGGH--H--------------------------H
T ss_pred CCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhh--H--------------------------H
Confidence 34678999999999988889999999999999999999999998766431 1 1
Q ss_pred HHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 126 FVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 126 f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.+.... ..+++++||+||.+|.||..+++.|.+.| |+ ++..|+||+.+|..+
T Consensus 171 ~l~~~l-~~~kdk~IVvyC~~G~RS~~Aa~~L~~~G-------f~---------nV~~L~GGi~aW~~~ 222 (265)
T 4f67_A 171 YVQRNL-IDKKDKKIAMFCTGGIRCEKTTAYMKELG-------FE---------HVYQLHDGILNYLES 222 (265)
T ss_dssp HHHHHT-GGGTTSCEEEECSSSHHHHHHHHHHHHHT-------CS---------SEEEETTHHHHHHHH
T ss_pred HHHHhh-hhCCCCeEEEEeCCChHHHHHHHHHHHcC-------CC---------CEEEecCHHHHHHHh
Confidence 111000 02468999999999999999999999885 45 677789999999665
No 26
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.71 E-value=5.4e-17 Score=146.08 Aligned_cols=128 Identities=13% Similarity=0.141 Sum_probs=95.2
Q ss_pred CCcccHHHHHHHHhCC----CcEEEecC---------ChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccc
Q 025953 48 VNYVNAEEAKNLIAVE----RYAVLDVR---------DNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLF 114 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~~----~~vLIDVR---------~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~ 114 (245)
...|+++||.++++++ +++||||| ++.||..||||||+|+|+..+.....
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~----------------- 83 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTS----------------- 83 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSC-----------------
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCC-----------------
Confidence 3569999999999875 89999999 78999999999999999976543211
Q ss_pred cCCCCCCCCh-HHHHHhhhc-CCCCCeEEEEcC---CChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccc
Q 025953 115 FGLPFTKQNP-EFVQSVKSQ-FSPESKLLVVCQ---EGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIH 189 (245)
Q Consensus 115 ~g~~~~~~~~-~f~~~l~~~-l~~d~~VVVyC~---~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~ 189 (245)
..+...|.+ +|.+.+.+. ++++++|||||. ++.+|.+++++|+.+ ||+ ++.+|+||+.
T Consensus 84 -~~~~~lp~~~~~~~~~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~-------G~~---------~V~~L~GG~~ 146 (302)
T 3olh_A 84 -PYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAF-------GHH---------AVSLLDGGLR 146 (302)
T ss_dssp -SSSSCCCCHHHHHHHHHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHT-------TCC---------CEEEETTHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHc-------CCC---------cEEECCCCHH
Confidence 112344554 455555554 578999999996 456799999999987 555 7889999999
Q ss_pred ccccc---ccccccccccccccc
Q 025953 190 HFLPR---ASREVVPVVPCELVL 209 (245)
Q Consensus 190 ~~~~~---~~~~~~~~~~~~~~~ 209 (245)
+|... .+++.+.+.+.+|..
T Consensus 147 ~W~~~g~p~~~~~~~~~~~~~~~ 169 (302)
T 3olh_A 147 HWLRQNLPLSSGKSQPAPAEFRA 169 (302)
T ss_dssp HHHHSCCC-CCSCCCCCCCCCCC
T ss_pred HHHHcCCCcccCCCCcCcCcccc
Confidence 99765 344444455666653
No 27
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.71 E-value=6.7e-18 Score=149.41 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=91.7
Q ss_pred CcccHHHHHHHHhCCCcEEEecC-ChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCCh-HH
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVR-DNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNP-EF 126 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR-~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~-~f 126 (245)
..|+++|+.+++++++++||||| ++.||..||||||+|+|+........ ....+++ +|
T Consensus 8 ~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~--------------------~~~~~~~~~~ 67 (285)
T 1uar_A 8 VLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPV--------------------VRDFISEEEF 67 (285)
T ss_dssp GEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSS--------------------SSSBCCHHHH
T ss_pred ceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCc--------------------ccCCCCHHHH
Confidence 56999999999877789999999 78999999999999999864222100 0122343 45
Q ss_pred HHHhhhc-CCCCCeEEEEcCCCh-hHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc---ccccccc
Q 025953 127 VQSVKSQ-FSPESKLLVVCQEGL-RYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR---ASREVVP 201 (245)
Q Consensus 127 ~~~l~~~-l~~d~~VVVyC~~G~-RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~ 201 (245)
.+.+... ++++++|||||++|. +|.++++.|..+ ||+ ++.+|+||+.+|... .+++.+.
T Consensus 68 ~~~~~~~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~-------G~~---------~v~~l~GG~~~W~~~g~p~~~~~~~ 131 (285)
T 1uar_A 68 AKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYN-------GHK---------DVRLMNGGRQKWVEEGRPLTTEVPS 131 (285)
T ss_dssp HHHHHHTTCCTTCEEEEECHHHHHHHHHHHHHHHHT-------TCS---------CEEEETTHHHHHHHHTCCCBCCCCC
T ss_pred HHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHc-------CCC---------CeEEecCCHHHHHHCCCcccCCCCc
Confidence 4445544 688999999999887 799999999977 555 678999999999654 3444444
Q ss_pred ccccccc
Q 025953 202 VVPCELV 208 (245)
Q Consensus 202 ~~~~~~~ 208 (245)
+.+++|.
T Consensus 132 ~~~~~~~ 138 (285)
T 1uar_A 132 YPPGRYE 138 (285)
T ss_dssp CCCCCCC
T ss_pred ccCCCcc
Confidence 4445554
No 28
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.70 E-value=2.5e-17 Score=134.39 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=91.1
Q ss_pred CCCcccHHHHHHHHhCC----CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCC
Q 025953 47 DVNYVNAEEAKNLIAVE----RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQ 122 (245)
Q Consensus 47 ~~~~Is~eeL~~ll~~~----~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~ 122 (245)
.+..|+++|+.++++++ +.+|||||++ ||..||||||+|||+..+... ..
T Consensus 3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~-~~------------------------ 56 (152)
T 2j6p_A 3 NYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEE-MY------------------------ 56 (152)
T ss_dssp CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHH-HH------------------------
T ss_pred CcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHH-HH------------------------
Confidence 45789999999998763 7899999999 999999999999998765420 00
Q ss_pred ChHHHHHhhhcCCCCCeEEEEc-CCChhHHHHH----HHHHHcCCCceecccccCCCCcccccccccccccccccccccc
Q 025953 123 NPEFVQSVKSQFSPESKLLVVC-QEGLRYIRFC----RFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPRASR 197 (245)
Q Consensus 123 ~~~f~~~l~~~l~~d~~VVVyC-~~G~RS~~aa----~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 197 (245)
+++.+.+.. .+++.||+|| .+|.||..++ +.|.+.|| .+. ++..|+||+.+|... -.
T Consensus 57 -~~l~~~l~~--~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~-----~~~---------~v~~L~GG~~~W~~~-g~ 118 (152)
T 2j6p_A 57 -EKLAKTLFE--EKKELAVFHCAQSLVRAPKGANRFALAQKKLGY-----VLP---------AVYVLRGGWEAFYHM-YG 118 (152)
T ss_dssp -HHHHHHHHH--TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTC-----CCS---------EEEEETTHHHHHHHH-HT
T ss_pred -HHHHHHhcc--cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCC-----CCC---------CEEEEcCcHHHHHHH-cC
Confidence 111111111 1234677789 6999999988 67777765 234 678899999999554 11
Q ss_pred cccccccccccccCCceEeecCCcccchhhHhhh
Q 025953 198 EVVPVVPCELVLKIPDFVDLNPCVTVGEIEFLKN 231 (245)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (245)
+ ......||.+.+-+.+=.-|=||.
T Consensus 119 ~---------~~~~~~yv~m~~~~~~~~~~~~~~ 143 (152)
T 2j6p_A 119 D---------VRPDLMYVKLGPEQKLISEEDLNS 143 (152)
T ss_dssp T---------TCGGGCEEEETTTTEEEEHHHHHH
T ss_pred C---------CCCCCeeEecCCcccccchhhhhh
Confidence 1 112356788877777666665553
No 29
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.70 E-value=2e-17 Score=145.80 Aligned_cols=110 Identities=14% Similarity=0.147 Sum_probs=85.0
Q ss_pred CcccHHHHHHHHhCCCcEEEecCC-hhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCCh-HH
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRD-NSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNP-EF 126 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~-~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~-~f 126 (245)
..|+++++.+++++++.+|||||+ +.||..||||||+|+|+..+...... ...+++ +|
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~--------------------~~~~~~~~~ 65 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVK--------------------RDFVDAQQF 65 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSS--------------------SSBCCHHHH
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCC--------------------CCCCCHHHH
Confidence 469999999988777899999998 89999999999999998754331110 012333 44
Q ss_pred HHHhhhc-CCCCCeEEEEcCCC-hhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 127 VQSVKSQ-FSPESKLLVVCQEG-LRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 127 ~~~l~~~-l~~d~~VVVyC~~G-~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.+.+... ++++++|||||.+| .+|.++++.|..+ ||+ ++.+|+||+.+|...
T Consensus 66 ~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~-------G~~---------~v~~l~GG~~~W~~~ 119 (277)
T 3aay_A 66 SKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLY-------GHE---------KVKLLDGGRKKWELD 119 (277)
T ss_dssp HHHHHHHTCCTTSEEEEECSGGGHHHHHHHHHHHHT-------TCC---------SEEEETTHHHHHHHT
T ss_pred HHHHHHcCCCCCCeEEEECCCCCchHHHHHHHHHHc-------CCC---------cEEEecCCHHHHHHc
Confidence 4444444 78899999999976 5799999999987 455 678899999999655
No 30
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.70 E-value=3.2e-17 Score=144.07 Aligned_cols=109 Identities=13% Similarity=0.176 Sum_probs=86.8
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHHh--------hcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCC
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQYN--------RAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFT 120 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~--------~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~ 120 (245)
..|+++++.+++++++.+|||||++.||. .||||||+|+|+..+.... .. .
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~--~~-------------------~ 205 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPS--RA-------------------L 205 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGG--GT-------------------T
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCC--CC-------------------C
Confidence 46899999999988889999999999999 9999999999998765421 11 0
Q ss_pred CCChHHHHHhhh-cCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 121 KQNPEFVQSVKS-QFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 121 ~~~~~f~~~l~~-~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
...++|.+.+.+ .++++++||+||++|.||..+++.|..+ ||+ ++..++||+.+|...
T Consensus 206 ~~~~~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~-------G~~---------~v~~l~GG~~~W~~~ 264 (271)
T 1e0c_A 206 RIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKAL-------GYP---------RVKGYAGSWGEWGNH 264 (271)
T ss_dssp EECTTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHT-------TCS---------CEEECSSHHHHHTTC
T ss_pred CCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHc-------CCC---------CceeeCCcHHHHhcC
Confidence 112445444544 3788999999999999999999999987 455 678899999999543
No 31
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.70 E-value=7.5e-18 Score=124.00 Aligned_cols=79 Identities=14% Similarity=0.194 Sum_probs=62.2
Q ss_pred CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHHHhhhc-CCCCCeEEE
Q 025953 64 RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQSVKSQ-FSPESKLLV 142 (245)
Q Consensus 64 ~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~~l~~~-l~~d~~VVV 142 (245)
+.+|||||++.||+.||||||+|+|+..+... +... .+++++||+
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----------------------------------~~~l~~~~~~~ivv 46 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLKEVKER----------------------------------IATAVPDKNDTVKV 46 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHHHHHHH----------------------------------HHHHCCCTTSEEEE
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHHHHHHH----------------------------------HHHhCCCCCCcEEE
Confidence 46899999999999999999999998654320 1111 356899999
Q ss_pred EcCCChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccccccc
Q 025953 143 VCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 143 yC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
||++|.||..+++.|.++|| + ++.++ ||+.+|..
T Consensus 47 ~C~~g~rs~~aa~~L~~~G~-------~---------~v~~l-GG~~~w~~ 80 (85)
T 2jtq_A 47 YCNAGRQSGQAKEILSEMGY-------T---------HVENA-GGLKDIAM 80 (85)
T ss_dssp EESSSHHHHHHHHHHHHTTC-------S---------SEEEE-EETTTCCS
T ss_pred EcCCCchHHHHHHHHHHcCC-------C---------CEEec-cCHHHHhc
Confidence 99999999999999998855 4 45556 78888843
No 32
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.69 E-value=7.2e-18 Score=136.64 Aligned_cols=124 Identities=16% Similarity=0.174 Sum_probs=80.1
Q ss_pred CcccHHHHHHHHhC--CCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 49 NYVNAEEAKNLIAV--ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 49 ~~Is~eeL~~ll~~--~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
+.|+++|+.+++++ ++++|||||++.||+.||||||+|||+..+... .... + ..+.+++
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~-~~~~---------------~---~~~~~~l 64 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKR-RLQQ---------------D---KVLITEL 64 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHH-HHHT---------------T---SSCHHHH
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHh-hhhc---------------C---CcCHHHh
Confidence 56999999999973 578999999999999999999999998765211 0000 0 0000112
Q ss_pred H-HHhhhc--CCCCCeEEEEcCCChhHHHH------HHHHHHcCCCceecccccCCCCccccccccccccccccccc---
Q 025953 127 V-QSVKSQ--FSPESKLLVVCQEGLRYIRF------CRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR--- 194 (245)
Q Consensus 127 ~-~~l~~~--l~~d~~VVVyC~~G~RS~~a------a~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~--- 194 (245)
+ .+..+. ++++++|||||.+|.||..+ +++|..+. .||. ++.+|+||+.+|...
T Consensus 65 l~~~~~~~~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~-----~G~~---------~v~~L~GG~~~W~~~~~~ 130 (153)
T 2vsw_A 65 IQHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLE-----KSFN---------SVHLLAGGFAEFSRCFPG 130 (153)
T ss_dssp HHHSCSSCCCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHH-----HHCS---------CEEEETTHHHHHHHHCGG
T ss_pred cCchhhhhhccCCCCeEEEEeCCCCcccccccchHHHHHHHHHH-----hCCC---------cEEEEeChHHHHHHhChh
Confidence 1 111111 45689999999999888766 47777430 1555 788999999999654
Q ss_pred ccccccccccc
Q 025953 195 ASREVVPVVPC 205 (245)
Q Consensus 195 ~~~~~~~~~~~ 205 (245)
.+.+.+...|.
T Consensus 131 ~~~~~~~~~p~ 141 (153)
T 2vsw_A 131 LCEGKSTLVPT 141 (153)
T ss_dssp GEEC-------
T ss_pred hhcCCCCcCCC
Confidence 44444444443
No 33
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.68 E-value=7.5e-17 Score=142.52 Aligned_cols=107 Identities=14% Similarity=0.171 Sum_probs=81.8
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHH-----------hhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCC
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQY-----------NRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGL 117 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey-----------~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~ 117 (245)
..|+++|+.+++++++.+|||||++.|| ..||||||+|||+..+.....
T Consensus 152 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~-------------------- 211 (280)
T 1urh_A 152 AVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-------------------- 211 (280)
T ss_dssp GBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSS--------------------
T ss_pred cEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCc--------------------
Confidence 4599999999988778999999999999 689999999999987654100
Q ss_pred CCCCCChHHHHHhhh--cCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 118 PFTKQNPEFVQSVKS--QFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 118 ~~~~~~~~f~~~l~~--~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.+ +++.++++.. .++++++||+||.+|.||..++..|..+| |+ ++..++||+..|...
T Consensus 212 --~~-~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G-------~~---------~v~~~~GG~~~W~~~ 271 (280)
T 1urh_A 212 --LK-TTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLD-------VP---------NVKLYDGAWSEWGAR 271 (280)
T ss_dssp --BC-CHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTT-------CS---------SCEEECCSCCC----
T ss_pred --cC-CHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcC-------CC---------CceeeCChHHHHhcC
Confidence 11 2333333332 36789999999999999999999999875 45 677889999999543
No 34
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.68 E-value=3.7e-17 Score=147.15 Aligned_cols=109 Identities=17% Similarity=0.221 Sum_probs=86.5
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHH-----------hhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCC
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQY-----------NRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGL 117 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey-----------~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~ 117 (245)
..++++|+.+++++++.+|||||++.|| ..||||||+|||+.++.... +.
T Consensus 175 ~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~--~~----------------- 235 (302)
T 3olh_A 175 FIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQE--GL----------------- 235 (302)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSS--SC-----------------
T ss_pred ceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCC--Cc-----------------
Confidence 4689999999888778999999999999 78999999999998765421 10
Q ss_pred CCCCCChHHHHHhhhc-CCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 118 PFTKQNPEFVQSVKSQ-FSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 118 ~~~~~~~~f~~~l~~~-l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.++.+++.+.+.+. ++++++||+||++|.||..++..|..+ ||+ ++..++||+..|..+
T Consensus 236 --~~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~-------G~~---------~v~~~~Gg~~~W~~~ 295 (302)
T 3olh_A 236 --EKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLC-------GKP---------DVPIYDGSWVEWYMR 295 (302)
T ss_dssp --BCCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTT-------TCC---------CCCEESSHHHHHHHH
T ss_pred --cCCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHc-------CCC---------CeeEeCCcHHHHhhc
Confidence 12224454445443 778999999999999999999999987 455 677789999999554
No 35
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.68 E-value=1.7e-17 Score=143.74 Aligned_cols=111 Identities=23% Similarity=0.352 Sum_probs=79.2
Q ss_pred cCCCcccHHHHHHHHhCC------CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCC
Q 025953 46 ADVNYVNAEEAKNLIAVE------RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 119 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~------~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~ 119 (245)
..++.|+++++.++++++ +++|||||++.||+.||||||+|||+...... .+.+ .+.
T Consensus 54 ~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~----~l~~-------------~~~ 116 (216)
T 3op3_A 54 QDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFN----FFLK-------------KPI 116 (216)
T ss_dssp SSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHH----HHTS-------------SCC
T ss_pred CCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHH----HHhh-------------ccc
Confidence 457889999999999765 68999999999999999999999998642110 0000 000
Q ss_pred CCCChHHHHHhhhcCCCCC--eEEEEcC-CChhHHHHHHHHHHcCCC-ce--ecccccCCCCcccccccccccccccccc
Q 025953 120 TKQNPEFVQSVKSQFSPES--KLLVVCQ-EGLRYIRFCRFHRAARCW-KS--WFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 120 ~~~~~~f~~~l~~~l~~d~--~VVVyC~-~G~RS~~aa~~L~~~G~~-~~--~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
. ..++++ +||+||. +|.||..++..|...|.. +. ..||+ ++..|+||+.+|..
T Consensus 117 ~------------~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~---------~V~~L~GG~~aW~~ 175 (216)
T 3op3_A 117 V------------PLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYP---------ELYILKGGYRDFFP 175 (216)
T ss_dssp C------------CSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCC---------CEEEETTHHHHHTT
T ss_pred c------------ccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCC---------cEEEECCcHHHHHH
Confidence 0 011234 4999999 999999999999987511 00 12566 88999999999976
Q ss_pred c
Q 025953 194 R 194 (245)
Q Consensus 194 ~ 194 (245)
+
T Consensus 176 ~ 176 (216)
T 3op3_A 176 E 176 (216)
T ss_dssp T
T ss_pred h
Confidence 6
No 36
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.67 E-value=1.5e-16 Score=130.30 Aligned_cols=122 Identities=11% Similarity=-0.014 Sum_probs=78.3
Q ss_pred cCCCcccHHHHHHHHhCC--CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCC
Q 025953 46 ADVNYVNAEEAKNLIAVE--RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQN 123 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~--~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~ 123 (245)
.....|+++|+.++++++ +++|||||++.||+.||||||+|||+..+........+.. ..|+
T Consensus 12 ~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~----------------~lp~ 75 (157)
T 1whb_A 12 KEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEA----------------HLPD 75 (157)
T ss_dssp CCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHH----------------SCCT
T ss_pred ccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHH----------------HCCh
Confidence 556789999999999876 7899999999999999999999999876643211122211 0111
Q ss_pred hHHHHHhhhcCCCCCeEEEEcCCChh----HHHHHHHHHHc--CCCceecccccCCCCccccccccccccccccccc
Q 025953 124 PEFVQSVKSQFSPESKLLVVCQEGLR----YIRFCRFHRAA--RCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 124 ~~f~~~l~~~l~~d~~VVVyC~~G~R----S~~aa~~L~~~--G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
..+.++....+.+.||+||.+|.+ +..+++.|.+. .+... .||. .++.+|+||+.+|...
T Consensus 76 --~~~~~~~~~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~-~~~~--------~~V~~L~GG~~aW~~~ 141 (157)
T 1whb_A 76 --DSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESK-TVLR--------NEPLVLEGGYENWLLC 141 (157)
T ss_dssp --THHHHHHGGGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSS-CCCS--------SCCEEESSCHHHHHHH
T ss_pred --HHHHHHHhcCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccc-cccC--------CCeEEEcchHHHHHHH
Confidence 111222222334569999986643 34556666532 11000 1232 2589999999999654
No 37
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.67 E-value=4.6e-17 Score=133.07 Aligned_cols=110 Identities=18% Similarity=0.332 Sum_probs=80.2
Q ss_pred cCCCcccHHHHHHHHhC------CCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCC
Q 025953 46 ADVNYVNAEEAKNLIAV------ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 119 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~------~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~ 119 (245)
..++.|+++|+.+++++ ++.+|||||++.||+.||||||+|||+..+... ...
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~-----~~~---------------- 78 (161)
T 1c25_A 20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVED-----FLL---------------- 78 (161)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHH-----HTT----------------
T ss_pred CCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHH-----HHh----------------
Confidence 45678999999999976 368999999999999999999999998654321 000
Q ss_pred CCCChHHHHHhhhcCCCCCeE--EEEcC-CChhHHHHHHHHHHcCCC--c-eecccccCCCCcccccccccccccccccc
Q 025953 120 TKQNPEFVQSVKSQFSPESKL--LVVCQ-EGLRYIRFCRFHRAARCW--K-SWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 120 ~~~~~~f~~~l~~~l~~d~~V--VVyC~-~G~RS~~aa~~L~~~G~~--~-~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
......+++++| |+||. +|.||..++..|.+.|.. . ...||+ ++.+|+||+.+|..
T Consensus 79 ---------~~~~~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~---------~v~~l~GG~~~W~~ 140 (161)
T 1c25_A 79 ---------KKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYP---------ELYVLKGGYKEFFM 140 (161)
T ss_dssp ---------TSCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSC---------CEEEETTHHHHHHH
T ss_pred ---------hhhhccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCc---------eEEEEcCCHHHHHH
Confidence 000011346776 67899 999999999999864200 0 012665 78899999999965
Q ss_pred c
Q 025953 194 R 194 (245)
Q Consensus 194 ~ 194 (245)
.
T Consensus 141 ~ 141 (161)
T 1c25_A 141 K 141 (161)
T ss_dssp H
T ss_pred H
Confidence 5
No 38
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.64 E-value=4e-16 Score=137.95 Aligned_cols=106 Identities=17% Similarity=0.213 Sum_probs=82.8
Q ss_pred CcccHHHHHHHHh---CCCcEEEecCChhHHh----------------hcCCCCeEeeCCccccCCCcchhhhhhhcccc
Q 025953 49 NYVNAEEAKNLIA---VERYAVLDVRDNSQYN----------------RAHIKSSYHVPLFIENQDNDLGTIIKRTVHNN 109 (245)
Q Consensus 49 ~~Is~eeL~~ll~---~~~~vLIDVR~~~Ey~----------------~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~ 109 (245)
..|+++|+.++++ .++..|||||++.||. .||||||+|+|+..+.... +
T Consensus 146 ~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~--~---------- 213 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD--G---------- 213 (285)
T ss_dssp GEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT--S----------
T ss_pred eEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCC--C----------
Confidence 4599999999884 2345799999999998 8999999999998765421 0
Q ss_pred cCccccCCCCCCCCh-HHHHHhhhc-CCCCCeEEEEcCCChhHHHHHHHHH-HcCCCceecccccCCCCccccccccccc
Q 025953 110 FSGLFFGLPFTKQNP-EFVQSVKSQ-FSPESKLLVVCQEGLRYIRFCRFHR-AARCWKSWFGYSSRQDFSCTWNCAYLCI 186 (245)
Q Consensus 110 ~~~l~~g~~~~~~~~-~f~~~l~~~-l~~d~~VVVyC~~G~RS~~aa~~L~-~~G~~~~~~Gy~~~~~~~~~~~~~~l~~ 186 (245)
..+++ +|.+.+.+. ++++++||+||++|.||..+++.|. .+ ||+ ++..++|
T Consensus 214 ----------~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~-------G~~---------~v~~l~G 267 (285)
T 1uar_A 214 ----------TFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLL-------GYP---------HVKNYDG 267 (285)
T ss_dssp ----------CBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTS-------CCS---------CEEEESS
T ss_pred ----------cCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHc-------CCC---------CcceeCc
Confidence 11233 344444433 7889999999999999999999998 77 455 6788999
Q ss_pred cccccc
Q 025953 187 SIHHFL 192 (245)
Q Consensus 187 ~~~~~~ 192 (245)
|+.+|.
T Consensus 268 G~~~W~ 273 (285)
T 1uar_A 268 SWTEWG 273 (285)
T ss_dssp HHHHHT
T ss_pred hHHHHh
Confidence 999995
No 39
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.64 E-value=1.7e-16 Score=131.60 Aligned_cols=109 Identities=21% Similarity=0.400 Sum_probs=78.8
Q ss_pred cCCCcccHHHHHHHHhC------CCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCC
Q 025953 46 ADVNYVNAEEAKNLIAV------ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 119 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~------~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~ 119 (245)
..++.|+++|+.+++++ ++.+|||||++.||+.||||||+|||+..+... ...
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~-----~~~---------------- 79 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAES-----FLL---------------- 79 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHH-----HHH----------------
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHH-----hhh----------------
Confidence 45688999999999976 368999999999999999999999998654321 000
Q ss_pred CCCChHHHHHhhhcC--CCCCeEEE--EcC-CChhHHHHHHHHHHcC--CCc-eecccccCCCCcccccccccccccccc
Q 025953 120 TKQNPEFVQSVKSQF--SPESKLLV--VCQ-EGLRYIRFCRFHRAAR--CWK-SWFGYSSRQDFSCTWNCAYLCISIHHF 191 (245)
Q Consensus 120 ~~~~~~f~~~l~~~l--~~d~~VVV--yC~-~G~RS~~aa~~L~~~G--~~~-~~~Gy~~~~~~~~~~~~~~l~~~~~~~ 191 (245)
. ...+ +++++||| ||. +|.||..+++.|.+.| .+. ...||+ ++.+|+||+.+|
T Consensus 80 ---------~-~~~~~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~---------~V~~L~GG~~~W 140 (175)
T 2a2k_A 80 ---------K-SPIAPCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYP---------EMYILKGGYKEF 140 (175)
T ss_dssp ---------S-SCCCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCC---------CEEEETTHHHHH
T ss_pred ---------h-hhhccccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCc---------eEEEEcCCHHHH
Confidence 0 0011 24788755 599 9999999999998643 000 013666 788999999999
Q ss_pred ccc
Q 025953 192 LPR 194 (245)
Q Consensus 192 ~~~ 194 (245)
...
T Consensus 141 ~~~ 143 (175)
T 2a2k_A 141 FPQ 143 (175)
T ss_dssp TTT
T ss_pred HHH
Confidence 655
No 40
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.64 E-value=2.8e-16 Score=140.35 Aligned_cols=108 Identities=16% Similarity=0.262 Sum_probs=84.6
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHH------------hhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccC
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQY------------NRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFG 116 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey------------~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g 116 (245)
..|+++|+.+++++++.+|||||++.|| ..||||||+|||+..+.... +.
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~--~~---------------- 221 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED--GF---------------- 221 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT--SC----------------
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCC--Cc----------------
Confidence 5799999999987778999999999999 78999999999998765420 00
Q ss_pred CCCCCCChHHHHHhhh-cCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccccccc
Q 025953 117 LPFTKQNPEFVQSVKS-QFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 117 ~~~~~~~~~f~~~l~~-~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
.++.+++.+.+.+ .++++++||+||.+|.||..++..|..+| |+ ++..+.||+..|..
T Consensus 222 ---~~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G-------~~---------~v~~~~GG~~~W~~ 280 (296)
T 1rhs_A 222 ---EKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCG-------KP---------DVAIYDGSWFEWFH 280 (296)
T ss_dssp ---BCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTT-------CC---------CCEEESSHHHHHHH
T ss_pred ---CCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcC-------CC---------CceeeCCcHHHHhc
Confidence 1111333333333 26789999999999999999999999874 45 66778899999954
No 41
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.64 E-value=1.1e-16 Score=126.67 Aligned_cols=110 Identities=10% Similarity=0.102 Sum_probs=69.2
Q ss_pred CcccHHHHHH--------HHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCC
Q 025953 49 NYVNAEEAKN--------LIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFT 120 (245)
Q Consensus 49 ~~Is~eeL~~--------ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~ 120 (245)
+.|+++|+.+ ++++++.+|||||++.||..||||||+|+|+..+.... .+.+ + .
T Consensus 1 k~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~---~~~~------------~---~ 62 (142)
T 2ouc_A 1 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRR---RLQQ------------G---K 62 (142)
T ss_dssp CEECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHH---HHHT------------T---S
T ss_pred CccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHH---Hhhc------------C---C
Confidence 3589999998 66666789999999999999999999999997643210 0000 0 0
Q ss_pred CCChHHHHHhhhcCC-----CCCeEEEEcCCChhH---------HHHHHHHHHcCCCceecccccCCCCccccccccccc
Q 025953 121 KQNPEFVQSVKSQFS-----PESKLLVVCQEGLRY---------IRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCI 186 (245)
Q Consensus 121 ~~~~~f~~~l~~~l~-----~d~~VVVyC~~G~RS---------~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~ 186 (245)
.+.++++..-. ... ++++||+||.+|.+| ..++..|...|| ++.+|+|
T Consensus 63 ~~~~~~~~~~~-~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-----------------~v~~l~G 124 (142)
T 2ouc_A 63 ITVLDLISCRE-GKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-----------------EPLVLKG 124 (142)
T ss_dssp SCHHHHHHTTS-CTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-----------------CCEEETT
T ss_pred cchhhhCCChh-hhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-----------------cEEEEcc
Confidence 00011111000 000 268999999998875 346677777654 3568999
Q ss_pred cccccccc
Q 025953 187 SIHHFLPR 194 (245)
Q Consensus 187 ~~~~~~~~ 194 (245)
|+.+|...
T Consensus 125 G~~~w~~~ 132 (142)
T 2ouc_A 125 GLSSFKQN 132 (142)
T ss_dssp HHHHHTTT
T ss_pred CHHHHHHH
Confidence 99999654
No 42
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.64 E-value=6.6e-16 Score=132.50 Aligned_cols=109 Identities=22% Similarity=0.408 Sum_probs=81.1
Q ss_pred cCCCcccHHHHHHHHhCC------CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCC
Q 025953 46 ADVNYVNAEEAKNLIAVE------RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 119 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~------~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~ 119 (245)
..+..|+++|+.++++++ +.+|||||++.||+.||||||+|||+..+... ..
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~-----~~----------------- 98 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAES-----FL----------------- 98 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHH-----HH-----------------
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHH-----hh-----------------
Confidence 457889999999999763 68999999999999999999999998654321 00
Q ss_pred CCCChHHHHHhhhcC--CCCCeE--EEEcC-CChhHHHHHHHHHHcCC--C-ceecccccCCCCcccccccccccccccc
Q 025953 120 TKQNPEFVQSVKSQF--SPESKL--LVVCQ-EGLRYIRFCRFHRAARC--W-KSWFGYSSRQDFSCTWNCAYLCISIHHF 191 (245)
Q Consensus 120 ~~~~~~f~~~l~~~l--~~d~~V--VVyC~-~G~RS~~aa~~L~~~G~--~-~~~~Gy~~~~~~~~~~~~~~l~~~~~~~ 191 (245)
... ..+ +++++| |+||. +|.||..+++.|.+.|- + =...||+ ++.+|+||+.+|
T Consensus 99 --------~~~-~~l~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~---------~V~~L~GG~~~W 160 (211)
T 1qb0_A 99 --------LKS-PIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYP---------EMYILKGGYKEF 160 (211)
T ss_dssp --------HTT-TCCCSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCC---------CEEEETTHHHHH
T ss_pred --------hhh-hhccccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCC---------eEEEECCHHHHH
Confidence 000 012 247787 78899 99999999999986420 0 0013666 788999999999
Q ss_pred ccc
Q 025953 192 LPR 194 (245)
Q Consensus 192 ~~~ 194 (245)
...
T Consensus 161 ~~~ 163 (211)
T 1qb0_A 161 FPQ 163 (211)
T ss_dssp TTT
T ss_pred HHH
Confidence 555
No 43
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.63 E-value=6.2e-16 Score=126.93 Aligned_cols=120 Identities=12% Similarity=-0.009 Sum_probs=77.4
Q ss_pred cCCCcccHHHHHHHHhCC--CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCC
Q 025953 46 ADVNYVNAEEAKNLIAVE--RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQN 123 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~--~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~ 123 (245)
.....|+++|+.++++++ +.+|||||++.||+.||||||+|||+..+........+.+ ..
T Consensus 17 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~----------------~l-- 78 (157)
T 2gwf_A 17 RGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEA----------------HL-- 78 (157)
T ss_dssp --CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHH----------------TS--
T ss_pred CCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHH----------------Hc--
Confidence 456789999999999876 8899999999999999999999999876643211222211 01
Q ss_pred hHHHHHhhhcCCCCCeEEEEcCCChh----HHHHHHHHHH----cCCCceecccccCCCCccccccccccccccccccc
Q 025953 124 PEFVQSVKSQFSPESKLLVVCQEGLR----YIRFCRFHRA----ARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 124 ~~f~~~l~~~l~~d~~VVVyC~~G~R----S~~aa~~L~~----~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
|+..+.++....+.+.||+||.+|.+ +..+++.|.+ .++.. ||. .++.+|+||+.+|...
T Consensus 79 p~~~~~l~~~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~---~~~--------~~V~~L~GG~~aW~~~ 146 (157)
T 2gwf_A 79 PDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKT---VLR--------NEPLVLEGGYENWLLC 146 (157)
T ss_dssp CHHHHHHHHTTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSS---CCS--------SCCEEETTHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhcccc---ccC--------CceEEEccHHHHHHHH
Confidence 12222333333445679999986643 3445555542 22211 232 2588999999999644
No 44
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.63 E-value=7e-17 Score=130.58 Aligned_cols=116 Identities=12% Similarity=0.093 Sum_probs=77.3
Q ss_pred CCCcccHHHHHHHHhCC--CcEEEecCChhHHhhcCCCCeEeeCCccccCC-CcchhhhhhhcccccCccccCCCCCCCC
Q 025953 47 DVNYVNAEEAKNLIAVE--RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQD-NDLGTIIKRTVHNNFSGLFFGLPFTKQN 123 (245)
Q Consensus 47 ~~~~Is~eeL~~ll~~~--~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~-~~~~~l~k~~~~~~~~~l~~g~~~~~~~ 123 (245)
....|+++|+.++++++ +.+|||||++.||+.||||||+|||+..+... ..... . .+....+.
T Consensus 14 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~----------~----~~~~~l~~ 79 (154)
T 1hzm_A 14 MAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGN----------L----PVRALFTR 79 (154)
T ss_dssp CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSC----------C----CTTTTSTT
T ss_pred cccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCc----------c----cHHHhCCC
Confidence 35679999999988765 78999999999999999999999998764310 00000 0 00001112
Q ss_pred hHHHHHhhhcCCCCCeEEEEcCCChhH-------HHHHHHHHHc---CCCceecccccCCCCcccccccccccccccccc
Q 025953 124 PEFVQSVKSQFSPESKLLVVCQEGLRY-------IRFCRFHRAA---RCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 124 ~~f~~~l~~~l~~d~~VVVyC~~G~RS-------~~aa~~L~~~---G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
++..+.+ ..++++++|||||.+|.++ ..++++|+.+ || ++.+|+||+.+|..
T Consensus 80 ~~~~~~~-~~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~-----------------~v~~L~GG~~~W~~ 141 (154)
T 1hzm_A 80 GEDRDRF-TRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGC-----------------RAFYLEGGFSKFQA 141 (154)
T ss_dssp SHHHHHH-HHSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTC-----------------CCEECCCCHHHHHH
T ss_pred HHHHHHH-hccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCC-----------------ceEEEcChHHHHHH
Confidence 2222222 2356788999999988775 4557777754 43 25678999999954
Q ss_pred c
Q 025953 194 R 194 (245)
Q Consensus 194 ~ 194 (245)
.
T Consensus 142 ~ 142 (154)
T 1hzm_A 142 E 142 (154)
T ss_dssp H
T ss_pred H
Confidence 3
No 45
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.63 E-value=8.6e-16 Score=139.24 Aligned_cols=106 Identities=16% Similarity=0.252 Sum_probs=82.7
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHHhh----------------cCCCCeEeeCCccccCCCcchhhhhhhcccccCc
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQYNR----------------AHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSG 112 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~----------------GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~ 112 (245)
..|+++|+.+++++. +|||||++.||.. ||||||+|||+..+.... +.
T Consensus 179 ~~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~--g~------------ 242 (318)
T 3hzu_A 179 IRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADES--GR------------ 242 (318)
T ss_dssp TBCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTT--SC------------
T ss_pred ccccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCC--Cc------------
Confidence 458999999988654 8999999999998 999999999998765421 00
Q ss_pred cccCCCCCCCChHHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHH-cCCCceecccccCCCCcccccccccccccccc
Q 025953 113 LFFGLPFTKQNPEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRA-ARCWKSWFGYSSRQDFSCTWNCAYLCISIHHF 191 (245)
Q Consensus 113 l~~g~~~~~~~~~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~-~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~ 191 (245)
.+ +++.+++....++++++||+||++|.||..++..|.+ + ||+ ++..++||+..|
T Consensus 243 -------~~-~~~~l~~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~-------G~~---------~v~~~~GG~~~W 298 (318)
T 3hzu_A 243 -------FR-SREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLL-------GKA---------DVRNYDGSWTEW 298 (318)
T ss_dssp -------BC-CHHHHHHHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTS-------CCS---------SCEECTTHHHHH
T ss_pred -------CC-CHHHHHHHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHc-------CCC---------CeeEeCCcHHHH
Confidence 11 2333344335578899999999999999999999986 6 555 677889999999
Q ss_pred ccc
Q 025953 192 LPR 194 (245)
Q Consensus 192 ~~~ 194 (245)
...
T Consensus 299 ~~~ 301 (318)
T 3hzu_A 299 GNA 301 (318)
T ss_dssp TTS
T ss_pred hcC
Confidence 643
No 46
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.63 E-value=3.7e-16 Score=145.02 Aligned_cols=123 Identities=14% Similarity=0.122 Sum_probs=89.0
Q ss_pred CCcccHHHHHHHHhCCCcEEEecCC--------hhHHhhcCCCCeEeeCCcc-ccCCCcchhhhhhhcccccCccccCCC
Q 025953 48 VNYVNAEEAKNLIAVERYAVLDVRD--------NSQYNRAHIKSSYHVPLFI-ENQDNDLGTIIKRTVHNNFSGLFFGLP 118 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~~~~vLIDVR~--------~~Ey~~GHIPGAinIPl~~-l~~~~~~~~l~k~~~~~~~~~l~~g~~ 118 (245)
...|+++|+.+++++ ++|||||+ +.||..||||||+|+|+.. +..... . .+..
T Consensus 13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~-~---------------~~~~ 74 (373)
T 1okg_A 13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVP-T---------------STAR 74 (373)
T ss_dssp CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCT-T---------------CCCS
T ss_pred CcEEcHHHHHHHcCC--cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccc-c---------------CCcc
Confidence 467999999998865 89999998 6999999999999999975 533100 0 0112
Q ss_pred CCCCC-hHHHHHhhhc-CCCCCeEEEEc-CCChhHH-HHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 119 FTKQN-PEFVQSVKSQ-FSPESKLLVVC-QEGLRYI-RFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 119 ~~~~~-~~f~~~l~~~-l~~d~~VVVyC-~~G~RS~-~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
...|+ ++|.+.+.+. ++++++||||| .+|.||. +++++|+.+|| + +.+|+||+.+|...
T Consensus 75 ~~lp~~~~f~~~l~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~----------------V~~L~GG~~aW~~~ 137 (373)
T 1okg_A 75 HPLPPXAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-D----------------AYVINGGFQACKAA 137 (373)
T ss_dssp SCCCCHHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-C----------------EEEETTTTHHHHTT
T ss_pred ccCCCHHHHHHHHHHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-e----------------EEEeCCCHHHHHhh
Confidence 23445 4555555544 68899999999 6888886 99999998865 3 45789999999665
Q ss_pred ---ccccccccccc
Q 025953 195 ---ASREVVPVVPC 205 (245)
Q Consensus 195 ---~~~~~~~~~~~ 205 (245)
.+++.+.+.+.
T Consensus 138 g~pv~~~~~~~~~~ 151 (373)
T 1okg_A 138 GLEMESGEPSSLPR 151 (373)
T ss_dssp TCCEECSCCCSCCC
T ss_pred cCCcccCCCCcCcc
Confidence 34443444444
No 47
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.61 E-value=1.4e-15 Score=124.40 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=75.0
Q ss_pred cCCCcccHHHHHHHHh--------CCCcEEEecCChhHHhhcCCCCeEeeCCcccc-----CCCcc--hhhhhhhccccc
Q 025953 46 ADVNYVNAEEAKNLIA--------VERYAVLDVRDNSQYNRAHIKSSYHVPLFIEN-----QDNDL--GTIIKRTVHNNF 110 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~--------~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~-----~~~~~--~~l~k~~~~~~~ 110 (245)
..++.|+++|+.++++ +++.+|||||++.||..||||||+|+|+..+. ..... ..+..
T Consensus 8 ~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~------- 80 (158)
T 3tg1_B 8 ASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLIS------- 80 (158)
T ss_dssp ---CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTC-------
T ss_pred CCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcC-------
Confidence 4578899999999997 34689999999999999999999999998753 10000 00000
Q ss_pred CccccCCCCCCCChHHHHHhhhcCCCCCeEEEEcCCC---------hhHHHHHHHHHHcCCCceecccccCCCCcccccc
Q 025953 111 SGLFFGLPFTKQNPEFVQSVKSQFSPESKLLVVCQEG---------LRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNC 181 (245)
Q Consensus 111 ~~l~~g~~~~~~~~~f~~~l~~~l~~d~~VVVyC~~G---------~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~ 181 (245)
.++..+.+ ...++++|||||.+| .+|..+++.|.+.|| ++
T Consensus 81 ------------~~~~~~~~--~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-----------------~v 129 (158)
T 3tg1_B 81 ------------CREGKDSF--KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-----------------EP 129 (158)
T ss_dssp ------------CCCSSCSS--TTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-----------------CE
T ss_pred ------------CHHHHHHH--hccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-----------------cE
Confidence 00000000 012478999999988 469999999998754 24
Q ss_pred ccccccccccccc
Q 025953 182 AYLCISIHHFLPR 194 (245)
Q Consensus 182 ~~l~~~~~~~~~~ 194 (245)
.+|+||+.+|...
T Consensus 130 ~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 130 LVLKGGLSSFKQN 142 (158)
T ss_dssp EEETTHHHHHTSS
T ss_pred EEeCCcHHHHHHH
Confidence 5789999999655
No 48
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.61 E-value=7.7e-17 Score=134.28 Aligned_cols=111 Identities=17% Similarity=0.191 Sum_probs=78.1
Q ss_pred cCCCcccHHHHHHHHhCC-------CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCC
Q 025953 46 ADVNYVNAEEAKNLIAVE-------RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLP 118 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~-------~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~ 118 (245)
..++.|+++||.++++++ +++|||||+ .||..||||||+|||+..+... ...+
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~--~~~l----------------- 87 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQD--PEYL----------------- 87 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHC--HHHH-----------------
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcc--cccH-----------------
Confidence 457789999999998753 489999999 9999999999999998776431 0000
Q ss_pred CCCCChHHHHHhhhc-C--CCCCeEEEEcCCC-hhHHHHHHHHHHc-CCCceecc--cccCCCCcccccccccccccccc
Q 025953 119 FTKQNPEFVQSVKSQ-F--SPESKLLVVCQEG-LRYIRFCRFHRAA-RCWKSWFG--YSSRQDFSCTWNCAYLCISIHHF 191 (245)
Q Consensus 119 ~~~~~~~f~~~l~~~-l--~~d~~VVVyC~~G-~RS~~aa~~L~~~-G~~~~~~G--y~~~~~~~~~~~~~~l~~~~~~~ 191 (245)
+++.+.+... + .++++|||||.+| .||..++..|.+. +- .| |. ++..|+||+.+|
T Consensus 88 -----~~l~~~~~~~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~----~G~~~~---------~V~~L~GG~~aW 149 (169)
T 3f4a_A 88 -----RELKHRLLEKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDT----AELSRC---------RLWVLRGGFSRW 149 (169)
T ss_dssp -----HHHHHHHHHHHHTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCH----HHHTTE---------EEEEETTHHHHH
T ss_pred -----HHHHHHHHhhcccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHH----cCCCCC---------CEEEECCCHHHH
Confidence 1122222111 1 1247999999976 9999998776542 11 13 33 788999999999
Q ss_pred ccc
Q 025953 192 LPR 194 (245)
Q Consensus 192 ~~~ 194 (245)
...
T Consensus 150 ~~~ 152 (169)
T 3f4a_A 150 QSV 152 (169)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 49
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.61 E-value=6.5e-16 Score=136.10 Aligned_cols=104 Identities=20% Similarity=0.255 Sum_probs=80.5
Q ss_pred ccHHHHHHHHhCCCcEEEecCChhHHhh----------------cCCCCeEeeCCccccCCCcchhhhhhhcccccCccc
Q 025953 51 VNAEEAKNLIAVERYAVLDVRDNSQYNR----------------AHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLF 114 (245)
Q Consensus 51 Is~eeL~~ll~~~~~vLIDVR~~~Ey~~----------------GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~ 114 (245)
++++|+.+++++++ |||||++.||.. ||||||+|+|+..+... .+.
T Consensus 146 ~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~--~~~-------------- 207 (277)
T 3aay_A 146 AFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANE--DGT-------------- 207 (277)
T ss_dssp ECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCT--TSC--------------
T ss_pred cCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCC--CCc--------------
Confidence 78999999886655 999999999985 99999999998765431 000
Q ss_pred cCCCCCCCChHHHHHhhhc-CCCCCeEEEEcCCChhHHHHHHHHHH-cCCCceecccccCCCCccccccccccccccccc
Q 025953 115 FGLPFTKQNPEFVQSVKSQ-FSPESKLLVVCQEGLRYIRFCRFHRA-ARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFL 192 (245)
Q Consensus 115 ~g~~~~~~~~~f~~~l~~~-l~~d~~VVVyC~~G~RS~~aa~~L~~-~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~ 192 (245)
.++.+++.+.+.+. ++++++||+||++|.||..+++.|.+ + ||+ ++..++||+..|.
T Consensus 208 -----~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~-------G~~---------~v~~l~GG~~~W~ 266 (277)
T 3aay_A 208 -----FKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELL-------GHQ---------NVKNYDGSWTEYG 266 (277)
T ss_dssp -----BCCHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTS-------CCS---------CEEEESSHHHHHT
T ss_pred -----CCCHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHc-------CCC---------cceeeCchHHHHh
Confidence 12123444444443 78899999999999999999999985 6 555 6788999999996
Q ss_pred c
Q 025953 193 P 193 (245)
Q Consensus 193 ~ 193 (245)
.
T Consensus 267 ~ 267 (277)
T 3aay_A 267 S 267 (277)
T ss_dssp T
T ss_pred c
Confidence 5
No 50
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.58 E-value=8.6e-16 Score=148.25 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=80.3
Q ss_pred CCcccHHHHHHHHhCC-CcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 48 VNYVNAEEAKNLIAVE-RYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 48 ~~~Is~eeL~~ll~~~-~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
+..|+++|+.++++++ +.+|||||++.||..||||||+|||+..+..
T Consensus 6 ~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~-------------------------------- 53 (539)
T 1yt8_A 6 IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLEL-------------------------------- 53 (539)
T ss_dssp CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGGGHHH--------------------------------
T ss_pred CcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHHHHHH--------------------------------
Confidence 5679999999998754 7899999999999999999999999865432
Q ss_pred HHHhhhcC-CCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 127 VQSVKSQF-SPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 127 ~~~l~~~l-~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.+.... +++++|||||++|.+|.++++.|+.. ||+ ++.+|+||+.+|...
T Consensus 54 --~~~~l~~~~~~~iVvyc~~g~~s~~a~~~L~~~-------G~~---------~V~~L~GG~~~W~~~ 104 (539)
T 1yt8_A 54 --EIHARVPRRDTPITVYDDGEGLAPVAAQRLHDL-------GYS---------DVALLDGGLSGWRNA 104 (539)
T ss_dssp --HHHHHSCCTTSCEEEECSSSSHHHHHHHHHHHT-------TCS---------SEEEETTHHHHHHHT
T ss_pred --HHHhhCCCCCCeEEEEECCCChHHHHHHHHHHc-------CCC---------ceEEeCCCHHHHHhc
Confidence 111122 35899999999999999999999987 556 788999999999665
No 51
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.58 E-value=7.6e-15 Score=126.37 Aligned_cols=108 Identities=15% Similarity=0.102 Sum_probs=73.7
Q ss_pred CCCcEEEecCChhHHhhcCCCCeEeeCCc--cccCCCcchhhhhhhcccccCccccCCCCCCCChHHHHHhhhcCCCCCe
Q 025953 62 VERYAVLDVRDNSQYNRAHIKSSYHVPLF--IENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQSVKSQFSPESK 139 (245)
Q Consensus 62 ~~~~vLIDVR~~~Ey~~GHIPGAinIPl~--~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~~l~~~l~~d~~ 139 (245)
.++.+|||||++.||..||||||+|+|+. .+... .... ..++++.+++....++.+++
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~-~~~~-------------------~~~~~~~~~~~~~~l~~~~~ 63 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLR-EEAE-------------------LKALEGGLTELFQTLGLRSP 63 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCC-SHHH-------------------HHHHHHHHHHHHHHTTCCSS
T ss_pred CCCEEEEECCChhhHhhCcCCCCEECCccchhcccC-CCCC-------------------cCCCHHHHHHHHHhcCCCCE
Confidence 35789999999999999999999999987 54321 1101 01122333444444555899
Q ss_pred EEEEcCCCh-hHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc-ccccccccccccccc
Q 025953 140 LLVVCQEGL-RYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR-ASREVVPVVPCELVL 209 (245)
Q Consensus 140 VVVyC~~G~-RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 209 (245)
|||||++|. +|.++++.|. +|| + ++.+|+|| |... .+++.+.+.+.+|..
T Consensus 64 ivvyc~~g~~~s~~a~~~L~-~G~-------~---------~v~~l~GG---W~~~p~~~~~~~~~~~~~~~ 115 (230)
T 2eg4_A 64 VVLYDEGLTSRLCRTAFFLG-LGG-------L---------EVQLWTEG---WEPYATEKEEPKPERTEVVA 115 (230)
T ss_dssp EEEECSSSCHHHHHHHHHHH-HTT-------C---------CEEEECSS---CGGGCCBCSCCCCCCCCCCC
T ss_pred EEEEcCCCCccHHHHHHHHH-cCC-------c---------eEEEeCCC---CccCcccCCCCCccccccee
Confidence 999999887 9999999999 854 5 67788888 7542 223344445556554
No 52
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.56 E-value=4.9e-15 Score=138.79 Aligned_cols=110 Identities=9% Similarity=0.057 Sum_probs=85.4
Q ss_pred CcccHHHHHHHHhC--------CCcEEEecC--ChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCC
Q 025953 49 NYVNAEEAKNLIAV--------ERYAVLDVR--DNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLP 118 (245)
Q Consensus 49 ~~Is~eeL~~ll~~--------~~~vLIDVR--~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~ 118 (245)
..|+++++.++++. ++.+||||| ++.||..||||||+|+|+..+... ...
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~--~~~------------------ 183 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESE--PLW------------------ 183 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEET--TTT------------------
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccC--CCC------------------
Confidence 56899999998873 478999999 999999999999999999766431 001
Q ss_pred CCCCChHHHHHhhhc-CCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 119 FTKQNPEFVQSVKSQ-FSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 119 ~~~~~~~f~~~l~~~-l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
..++.+++.+.+.+. ++++++||+||.+|.||..+++.|+.+ ||+ ++.+++||+..|...
T Consensus 184 ~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~-------G~~---------~v~~l~Gg~~~W~~~ 244 (423)
T 2wlr_A 184 NKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYA-------GVK---------DVRLLDGGWQTWSDA 244 (423)
T ss_dssp EECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHH-------TCS---------CEEEETTTHHHHHHT
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHc-------CCC---------CeEEECCCHHHHhhC
Confidence 012224555555443 678999999999999999999999987 455 677899999999543
No 53
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.56 E-value=2.4e-15 Score=145.23 Aligned_cols=99 Identities=17% Similarity=0.225 Sum_probs=81.5
Q ss_pred hhccCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCC
Q 025953 43 KIRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQ 122 (245)
Q Consensus 43 ~~~~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~ 122 (245)
.....++.|+++|+.++++ ++.+|||||++.||+.||||||+|+|+..+... ..
T Consensus 483 ~~~~~~~~i~~~~~~~~~~-~~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~--~~----------------------- 536 (588)
T 3ics_A 483 IVDGFVDTVQWHEIDRIVE-NGGYLIDVREPNELKQGMIKGSINIPLDELRDR--LE----------------------- 536 (588)
T ss_dssp HHTTSCCEECTTTHHHHHH-TTCEEEECSCGGGGGGCBCTTEEECCHHHHTTC--GG-----------------------
T ss_pred ccccccceecHHHHHHHhc-CCCEEEEcCCHHHHhcCCCCCCEECCHHHHHHH--Hh-----------------------
Confidence 3457788999999999886 458999999999999999999999998765431 11
Q ss_pred ChHHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 123 NPEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 123 ~~~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.++++++||+||++|.||..+++.|++.|| ++..|+||+.+|...
T Consensus 537 ----------~l~~~~~iv~~C~~g~rs~~a~~~l~~~G~-----------------~v~~l~GG~~~w~~~ 581 (588)
T 3ics_A 537 ----------EVPVDKDIYITCQLGMRGYVAARMLMEKGY-----------------KVKNVDGGFKLYGTV 581 (588)
T ss_dssp ----------GSCSSSCEEEECSSSHHHHHHHHHHHHTTC-----------------CEEEETTHHHHHHHH
T ss_pred ----------hCCCCCeEEEECCCCcHHHHHHHHHHHcCC-----------------cEEEEcchHHHHHhh
Confidence 245589999999999999999999998865 245688999999544
No 54
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=2.4e-15 Score=142.24 Aligned_cols=98 Identities=18% Similarity=0.286 Sum_probs=82.0
Q ss_pred cCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChH
Q 025953 46 ADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPE 125 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~ 125 (245)
.....|+++++.+++++++.+|||||++.||+.||||||+|+|+..+... ..
T Consensus 371 ~~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~--~~-------------------------- 422 (474)
T 3tp9_A 371 ASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAH--IH-------------------------- 422 (474)
T ss_dssp ECCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCHHHHTTT--GG--------------------------
T ss_pred ccccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH--Hh--------------------------
Confidence 34567999999999887789999999999999999999999998765431 11
Q ss_pred HHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 126 FVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 126 f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
.++++++||+||.+|.||..+++.|+.+| |+ ++..++||+.+|...
T Consensus 423 -------~l~~~~~vvv~C~~G~ra~~a~~~L~~~G-------~~---------~v~~~~Gg~~~W~~~ 468 (474)
T 3tp9_A 423 -------DVPRDGSVCVYCRTGGRSAIAASLLRAHG-------VG---------DVRNMVGGYEAWRGK 468 (474)
T ss_dssp -------GSCSSSCEEEECSSSHHHHHHHHHHHHHT-------CS---------SEEEETTHHHHHHHT
T ss_pred -------cCCCCCEEEEECCCCHHHHHHHHHHHHcC-------CC---------CEEEecChHHHHHhC
Confidence 24568999999999999999999999874 45 677889999999543
No 55
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.55 E-value=6.2e-15 Score=142.26 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=82.4
Q ss_pred cCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChH
Q 025953 46 ADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPE 125 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~ 125 (245)
.....|+++++.+++++++.+|||||++.||..||||||+|+|...+...
T Consensus 374 ~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~------------------------------ 423 (539)
T 1yt8_A 374 PRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQA------------------------------ 423 (539)
T ss_dssp CCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCGGGHHHH------------------------------
T ss_pred CcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHH------------------------------
Confidence 45678999999999988889999999999999999999999997544321
Q ss_pred HHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 126 FVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 126 f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
+ ..++++++||+||.+|.||..+++.|+.+ ||+ ++..|+||+.+|...
T Consensus 424 ----l-~~l~~~~~ivv~C~sG~rs~~aa~~L~~~-------G~~---------~v~~l~GG~~~W~~~ 471 (539)
T 1yt8_A 424 ----L-ERLGTAERYVLTCGSSLLARFAVAEVQAL-------SGK---------PVFLLDGGTSAWVAA 471 (539)
T ss_dssp ----H-HHHCCCSEEEEECSSSHHHHHHHHHHHHH-------HCS---------CEEEETTHHHHHHHT
T ss_pred ----H-HhCCCCCeEEEEeCCChHHHHHHHHHHHc-------CCC---------CEEEeCCcHHHHHhC
Confidence 1 11356899999999999999999999987 555 678899999999654
No 56
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.54 E-value=2.6e-15 Score=143.68 Aligned_cols=95 Identities=17% Similarity=0.256 Sum_probs=78.8
Q ss_pred hccCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCC
Q 025953 44 IRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQN 123 (245)
Q Consensus 44 ~~~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~ 123 (245)
....++.|+++|+.++ +++.+|||||++.||+.+|||||+|+|+..+... ..
T Consensus 468 ~~~~~~~i~~~~~~~~--~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~--~~------------------------ 519 (565)
T 3ntd_A 468 IKGDATPIHFDQIDNL--SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDR--MH------------------------ 519 (565)
T ss_dssp HHTSCCEECTTTTTSC--CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTS--GG------------------------
T ss_pred cccccceeeHHHHHhC--CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHH--Hh------------------------
Confidence 4567788999999886 5678999999999999999999999999776541 11
Q ss_pred hHHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccc
Q 025953 124 PEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFL 192 (245)
Q Consensus 124 ~~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~ 192 (245)
.++++++||+||++|.||..+++.|.+.|| ++..|+||+.+|.
T Consensus 520 ---------~~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-----------------~v~~l~gG~~~w~ 562 (565)
T 3ntd_A 520 ---------ELPKDKEIIIFSQVGLRGNVAYRQLVNNGY-----------------RARNLIGGYRTYK 562 (565)
T ss_dssp ---------GSCTTSEEEEECSSSHHHHHHHHHHHHTTC-----------------CEEEETTHHHHHH
T ss_pred ---------hcCCcCeEEEEeCCchHHHHHHHHHHHcCC-----------------CEEEEcChHHHHH
Confidence 145589999999999999999999998866 2456788999994
No 57
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.54 E-value=1e-14 Score=125.57 Aligned_cols=94 Identities=21% Similarity=0.281 Sum_probs=74.1
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHHhh----------cCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCC
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQYNR----------AHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLP 118 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~----------GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~ 118 (245)
..|+++|+.+ +.+|||||++.||.. ||||||+|+|+..+.... ++.
T Consensus 121 ~~i~~~e~~~-----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~---e~~---------------- 176 (230)
T 2eg4_A 121 WLLTADEAAR-----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE---GLL---------------- 176 (230)
T ss_dssp GBCCHHHHHT-----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT---THH----------------
T ss_pred ceeCHHHHhh-----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH---HHH----------------
Confidence 4588888876 678999999999999 999999999988765421 000
Q ss_pred CCCCChHHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCccccccccccccccccccc
Q 025953 119 FTKQNPEFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 119 ~~~~~~~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (245)
+. ..++++++||+||.+|.||..++..|..+| . ++..++||+..|...
T Consensus 177 ---------~~--~~~~~~~~iv~~C~~G~rs~~a~~~L~~~G--------~---------~v~~~~Gg~~~W~~~ 224 (230)
T 2eg4_A 177 ---------ER--LGLQPGQEVGVYCHSGARSAVAFFVLRSLG--------V---------RARNYLGSMHEWLQE 224 (230)
T ss_dssp ---------HH--HTCCTTCEEEEECSSSHHHHHHHHHHHHTT--------C---------EEEECSSHHHHHHHT
T ss_pred ---------Hh--cCCCCCCCEEEEcCChHHHHHHHHHHHHcC--------C---------CcEEecCcHHHHhhc
Confidence 00 125668999999999999999999999875 2 566788999999544
No 58
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.53 E-value=1.7e-14 Score=135.03 Aligned_cols=115 Identities=12% Similarity=0.176 Sum_probs=83.7
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhHH-----------hhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCC
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQY-----------NRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGL 117 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~Ey-----------~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~ 117 (245)
..|+++|+.+++++++.+|||||++.|| ..||||||+|+|+..... ....+.. .-
T Consensus 272 ~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~--~~~~~~~------------~~ 337 (423)
T 2wlr_A 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDST--HMEDFHN------------PD 337 (423)
T ss_dssp GEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTT--CCGGGBC------------TT
T ss_pred heecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccc--cHHHHcC------------CC
Confidence 4599999999887778899999999999 899999999999862111 0001000 00
Q ss_pred CCCCCChHHHHHhhh-cCCCCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccccccc
Q 025953 118 PFTKQNPEFVQSVKS-QFSPESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 118 ~~~~~~~~f~~~l~~-~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
...++.+++.+.+.. .++++++||+||.+|.||..++..|..+| |+ ++..++||+..|..
T Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G-------~~---------~v~~~~GG~~~W~~ 398 (423)
T 2wlr_A 338 GTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMG-------WK---------NVSVYDGGWYEWSS 398 (423)
T ss_dssp SSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTT-------CS---------SEEEESSHHHHHTT
T ss_pred CcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcC-------CC---------CcceeCccHHHHhc
Confidence 011222344444443 36789999999999999999999999874 45 67788999999965
No 59
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.52 E-value=3.3e-14 Score=130.12 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=87.2
Q ss_pred cccchhhhhhhhhccCCCcccHHHHHHHHhCC---CcEEEecC--------C-hhHH-hhcCCCCeEeeCCccccCCCcc
Q 025953 32 VSGKSICRRNLKIRADVNYVNAEEAKNLIAVE---RYAVLDVR--------D-NSQY-NRAHIKSSYHVPLFIENQDNDL 98 (245)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~Is~eeL~~ll~~~---~~vLIDVR--------~-~~Ey-~~GHIPGAinIPl~~l~~~~~~ 98 (245)
.++.+...+.+......+.|||+||.+++.++ .+++||++ + ..|| ++||||||+++++..+.+.
T Consensus 11 ~~~~~p~~~~~~sm~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~--- 87 (327)
T 3utn_X 11 SSGLVPRGSHMASMPLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDK--- 87 (327)
T ss_dssp -------------CCSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCT---
T ss_pred cCCCCCCccccccCccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCC---
Confidence 44445555555555556689999999998643 47899985 2 3466 7899999999998654331
Q ss_pred hhhhhhhcccccCccccCCCCCCCCh-HHHHHhhhc-CCCCCeEEEEcC-CChhHHHHHHHHHHcCCCceecccccCCCC
Q 025953 99 GTIIKRTVHNNFSGLFFGLPFTKQNP-EFVQSVKSQ-FSPESKLLVVCQ-EGLRYIRFCRFHRAARCWKSWFGYSSRQDF 175 (245)
Q Consensus 99 ~~l~k~~~~~~~~~l~~g~~~~~~~~-~f~~~l~~~-l~~d~~VVVyC~-~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~ 175 (245)
. ..++++.|++ +|.+.+.+. ++++++||||++ ++..|.+++|+|+. +||.
T Consensus 88 ~---------------~~~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~-------~Gh~----- 140 (327)
T 3utn_X 88 K---------------SPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGV-------MGHP----- 140 (327)
T ss_dssp T---------------SSSTTCCCCHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHH-------TTCS-----
T ss_pred C---------------CCCCCCCcCHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHH-------cCCC-----
Confidence 1 1234566775 455556555 789999999998 56789999999995 4777
Q ss_pred ccccccccccccccccccc
Q 025953 176 SCTWNCAYLCISIHHFLPR 194 (245)
Q Consensus 176 ~~~~~~~~l~~~~~~~~~~ 194 (245)
++++|||+ .+|.+.
T Consensus 141 ----~V~vLdGg-~aW~~~ 154 (327)
T 3utn_X 141 ----KVYLLNNF-NQYREF 154 (327)
T ss_dssp ----EEEEESCH-HHHHHT
T ss_pred ----ceeecccH-HHHHHh
Confidence 89999987 899776
No 60
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.44 E-value=9.1e-15 Score=138.74 Aligned_cols=87 Identities=22% Similarity=0.282 Sum_probs=0.0
Q ss_pred HHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHHHhhhcCC
Q 025953 56 AKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQSVKSQFS 135 (245)
Q Consensus 56 L~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~~l~~~l~ 135 (245)
+.+++++++.+|||||++.||+.||||||+|+|+.++.+. .. .++
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~--~~---------------------------------~l~ 423 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLET--DL---------------------------------PFN 423 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHH--Hh---------------------------------hCC
Confidence 4555556678999999999999999999999999776541 11 134
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccccccc
Q 025953 136 PESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 136 ~d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
++++||+||.+|.||..+++.|+.+ ||+ ++..++||+.+|..
T Consensus 424 ~~~~iv~~C~~G~rs~~a~~~L~~~-------G~~---------~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 424 KNDVIYVHCQSGIRSSIAIGILEHK-------GYH---------NIINVNEGYKDIQL 465 (466)
T ss_dssp ----------------------------------------------------------
T ss_pred CCCeEEEECCCChHHHHHHHHHHHc-------CCC---------CEEEecChHHHHhh
Confidence 5899999999999999999999977 555 67888999999943
No 61
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.41 E-value=1.8e-13 Score=126.84 Aligned_cols=95 Identities=14% Similarity=0.226 Sum_probs=68.3
Q ss_pred CCCcEEEecCChhHHh-----------hcCCCCeEeeCCcccc--CCCcchhhhhhhcccccCccccCCCCCCCChHHHH
Q 025953 62 VERYAVLDVRDNSQYN-----------RAHIKSSYHVPLFIEN--QDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQ 128 (245)
Q Consensus 62 ~~~~vLIDVR~~~Ey~-----------~GHIPGAinIPl~~l~--~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~ 128 (245)
+++.+|||||++.||. .||||||+|||+..+. .. + +.. .+ +++.++
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~-~-~~~------------------~~-~~~~l~ 230 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRG-D-GKV------------------LR-SEEEIR 230 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCS-S-SCE------------------EC-CHHHHH
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCC-C-CCc------------------cC-CHHHHH
Confidence 4567899999999999 9999999999998764 21 0 000 01 223333
Q ss_pred H-hhhc---CCC---CCeEEEEcCCChhHHHHHHHHHHcCCCceecccccCCCCcccccccccccccccccc
Q 025953 129 S-VKSQ---FSP---ESKLLVVCQEGLRYIRFCRFHRAARCWKSWFGYSSRQDFSCTWNCAYLCISIHHFLP 193 (245)
Q Consensus 129 ~-l~~~---l~~---d~~VVVyC~~G~RS~~aa~~L~~~G~~~~~~Gy~~~~~~~~~~~~~~l~~~~~~~~~ 193 (245)
+ +.+. +++ +++||+||++|.||..++..|..+| |+ ++..++||+..|..
T Consensus 231 ~~~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G-------~~---------~v~~~~GG~~~W~~ 286 (373)
T 1okg_A 231 HNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLG-------LG---------HPYLYCGSWSEYSG 286 (373)
T ss_dssp HHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHTT-------SC---------CCEECSSHHHHHHH
T ss_pred HHHHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHcC-------CC---------CeeEeCChHHHHhc
Confidence 3 3322 367 8999999999999999999999875 45 56677888888854
No 62
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.41 E-value=2.6e-13 Score=124.14 Aligned_cols=93 Identities=14% Similarity=0.225 Sum_probs=67.9
Q ss_pred cccHHHHHHHHhCC----CcEEEecCChhHHh-----------hcCCCCeEeeCCccccCCCcchhhhhhhcccccCccc
Q 025953 50 YVNAEEAKNLIAVE----RYAVLDVRDNSQYN-----------RAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLF 114 (245)
Q Consensus 50 ~Is~eeL~~ll~~~----~~vLIDVR~~~Ey~-----------~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~ 114 (245)
.++.+++.+.++++ +.+|||+|++++|. .||||||+|+|+..+.+... .
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~--~-------------- 248 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPET--K-------------- 248 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTT--C--------------
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCC--C--------------
Confidence 47889998888654 46899999999996 49999999999987664211 0
Q ss_pred cCCCCCCCC-hHHHHHhh-------hcCCCCCeEEEEcCCChhHHHHHHHHHHcCC
Q 025953 115 FGLPFTKQN-PEFVQSVK-------SQFSPESKLLVVCQEGLRYIRFCRFHRAARC 162 (245)
Q Consensus 115 ~g~~~~~~~-~~f~~~l~-------~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~ 162 (245)
+.++. +.+...++ ..++++++||+||.+|.+|+..+..|+.+|+
T Consensus 249 ----~~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~ 300 (327)
T 3utn_X 249 ----TYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGV 300 (327)
T ss_dssp ----CCCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTC
T ss_pred ----CCCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCC
Confidence 01112 22222222 1367889999999999999999999998865
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=1.1e-12 Score=124.07 Aligned_cols=83 Identities=16% Similarity=0.196 Sum_probs=65.3
Q ss_pred ccCCCcccHHHHHHHHhCCCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCCh
Q 025953 45 RADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNP 124 (245)
Q Consensus 45 ~~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~ 124 (245)
...++.|+++||.++++++ +|||||++.+|..||||||+|+|+...
T Consensus 269 ~~~~~~is~~~l~~~l~~~--~iiD~R~~~~y~~ghIpGA~~i~~~~~-------------------------------- 314 (474)
T 3tp9_A 269 APERVDLPPERVRAWREGG--VVLDVRPADAFAKRHLAGSLNIPWNKS-------------------------------- 314 (474)
T ss_dssp CCEECCCCGGGHHHHHHTS--EEEECSCHHHHHHSEETTCEECCSSTT--------------------------------
T ss_pred cCCCceeCHHHHHHHhCCC--EEEECCChHHHhccCCCCeEEECcchH--------------------------------
Confidence 3456789999999998774 999999999999999999999997531
Q ss_pred HHHHHhhhcCCCCCeEEEEcCCChhHHHHHHHHHHcCCC
Q 025953 125 EFVQSVKSQFSPESKLLVVCQEGLRYIRFCRFHRAARCW 163 (245)
Q Consensus 125 ~f~~~l~~~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~~ 163 (245)
|.+.+....+++++|||||.+|. +.++++.|+.+||.
T Consensus 315 -~~~~~~~l~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~ 351 (474)
T 3tp9_A 315 -FVTWAGWLLPADRPIHLLAADAI-APDVIRALRSIGID 351 (474)
T ss_dssp -HHHHHHHHCCSSSCEEEECCTTT-HHHHHHHHHHTTCC
T ss_pred -HHHHHHhcCCCCCeEEEEECCCc-HHHHHHHHHHcCCc
Confidence 11122223456899999999876 56699999988664
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.94 E-value=1.4e-09 Score=103.13 Aligned_cols=69 Identities=9% Similarity=0.080 Sum_probs=54.1
Q ss_pred CCcEEEecCChhHHhhcCCCCeEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHHHhhhcCCCCCeEEE
Q 025953 63 ERYAVLDVRDNSQYNRAHIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQSVKSQFSPESKLLV 142 (245)
Q Consensus 63 ~~~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~~l~~~l~~d~~VVV 142 (245)
++++|||+|++.+|..||||||+|+|+..... ..+...++++++||+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~---------------------------------~~~~~~~~~~~~vvl 341 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFI---------------------------------NQIGWYLNYDQEINL 341 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHH---------------------------------HHHTTTCCTTSCEEE
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHH---------------------------------HHHHhccCCCCeEEE
Confidence 46799999999999999999999999753111 111112456899999
Q ss_pred EcCCChhHHHHHHHHHHcCCCce
Q 025953 143 VCQEGLRYIRFCRFHRAARCWKS 165 (245)
Q Consensus 143 yC~~G~RS~~aa~~L~~~G~~~~ 165 (245)
||. +.++.++++.|..+||.+.
T Consensus 342 y~~-~~~a~~a~~~L~~~G~~~v 363 (466)
T 3r2u_A 342 IGD-YHLVSKATHTLQLIGYDDI 363 (466)
T ss_dssp ESC-HHHHHHHHHHHHTTTCCCE
T ss_pred EEC-CchHHHHHHHhhhhhcccc
Confidence 999 5589999999999988654
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.99 E-value=1e-05 Score=65.33 Aligned_cols=85 Identities=14% Similarity=0.244 Sum_probs=53.1
Q ss_pred cccHHHHHHHHhCCCcEEEecCChhH------------Hhhc-CCCCeEeeCCccccCCCcchhhhhhhcccccCccccC
Q 025953 50 YVNAEEAKNLIAVERYAVLDVRDNSQ------------YNRA-HIKSSYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFG 116 (245)
Q Consensus 50 ~Is~eeL~~ll~~~~~vLIDVR~~~E------------y~~G-HIPGAinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g 116 (245)
.++++++..+.+.+-..|||+|++.| |..+ +|+|.+|+|+....
T Consensus 29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~----------------------- 85 (156)
T 2f46_A 29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARD----------------------- 85 (156)
T ss_dssp CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTT-----------------------
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCC-----------------------
Confidence 35677777765555568999998765 3344 59889999986421
Q ss_pred CCCCCCChHHHHHhhhcC-CCCCeEEEEcCCChhHHHHHHHH-HHcCC
Q 025953 117 LPFTKQNPEFVQSVKSQF-SPESKLLVVCQEGLRYIRFCRFH-RAARC 162 (245)
Q Consensus 117 ~~~~~~~~~f~~~l~~~l-~~d~~VVVyC~~G~RS~~aa~~L-~~~G~ 162 (245)
+.++.+..+.+.+ ..+.+|+|+|.+|.||..++-++ ...|.
T Consensus 86 -----~~~~~~~~~~~~l~~~~~pVlvHC~sG~Rs~~l~al~l~~~g~ 128 (156)
T 2f46_A 86 -----IQKHDVETFRQLIGQAEYPVLAYCRTGTRCSLLWGFRRAAEGM 128 (156)
T ss_dssp -----CCHHHHHHHHHHHHTSCSSEEEECSSSHHHHHHHHHHHHHTTC
T ss_pred -----CCHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHcCC
Confidence 0122222222222 23689999999999988554442 34453
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=93.75 E-value=0.2 Score=38.62 Aligned_cols=88 Identities=11% Similarity=0.054 Sum_probs=47.3
Q ss_pred cHHHHHHHHhCCCcEEEecCChhHHhhcCCCC--eEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHHH
Q 025953 52 NAEEAKNLIAVERYAVLDVRDNSQYNRAHIKS--SYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQS 129 (245)
Q Consensus 52 s~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPG--AinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~~ 129 (245)
+++++..+.+.+-..+||+|+..|......+| -+++|+.+.... ....+ .++++.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~----------------------~~~~~~ 80 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPP-APDQI----------------------DRFVQI 80 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTSCC-CHHHH----------------------HHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCCCC-CHHHH----------------------HHHHHH
Confidence 35666655444545799999876654444444 334565433210 10000 233344
Q ss_pred hhhcCCCCCeEEEEcCCCh-hHHHH-HH-HHHHcCC
Q 025953 130 VKSQFSPESKLLVVCQEGL-RYIRF-CR-FHRAARC 162 (245)
Q Consensus 130 l~~~l~~d~~VVVyC~~G~-RS~~a-a~-~L~~~G~ 162 (245)
+.+...++.+|+|+|..|. ||..+ +. ++...|+
T Consensus 81 i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~ 116 (150)
T 4erc_A 81 VDEANARGEAVGVHCALGFGRTGTMLACYLVKERGL 116 (150)
T ss_dssp HHHHHHTTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4444455789999999774 87743 33 3444554
No 67
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=92.99 E-value=0.26 Score=38.33 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=19.8
Q ss_pred cCCCCCeEEEEcCCCh-hHHHH--HHHHHHcCC
Q 025953 133 QFSPESKLLVVCQEGL-RYIRF--CRFHRAARC 162 (245)
Q Consensus 133 ~l~~d~~VVVyC~~G~-RS~~a--a~~L~~~G~ 162 (245)
....+.+|+|+|..|. ||..+ +.++...|.
T Consensus 85 ~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~ 117 (157)
T 3rgo_A 85 YQALGQCVYVHCKAGRSRSATMVAAYLIQVHNW 117 (157)
T ss_dssp HHHTTCEEEEESSSSSSHHHHHHHHHHHHHHTC
T ss_pred HHHCCCEEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 3445689999999776 87765 344444543
No 68
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=91.93 E-value=0.52 Score=36.11 Aligned_cols=80 Identities=13% Similarity=0.035 Sum_probs=42.5
Q ss_pred cHHHHHHHHhCCCcEEEecCChhHHhhcCCCC--eEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHHHHH
Q 025953 52 NAEEAKNLIAVERYAVLDVRDNSQYNRAHIKS--SYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEFVQS 129 (245)
Q Consensus 52 s~eeL~~ll~~~~~vLIDVR~~~Ey~~GHIPG--AinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f~~~ 129 (245)
+++++..+.+.+-..+||+|++.|+.....++ -.++|+.+.... +...+ .++++.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~p-~~~~~----------------------~~~~~~ 81 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPP-APDQI----------------------DRFVQI 81 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTCCC-CHHHH----------------------HHHHHH
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCCCC-CHHHH----------------------HHHHHH
Confidence 44555554444445799999886654333332 345555432210 00000 233444
Q ss_pred hhhcCCCCCeEEEEcCCC-hhHHHHH
Q 025953 130 VKSQFSPESKLLVVCQEG-LRYIRFC 154 (245)
Q Consensus 130 l~~~l~~d~~VVVyC~~G-~RS~~aa 154 (245)
+.+.+..+.+|+|+|..| .||..++
T Consensus 82 i~~~~~~~~~vlVHC~aG~~Rsg~~~ 107 (151)
T 2img_A 82 VDEANARGEAVGVHCALGFGRTGTML 107 (151)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHH
T ss_pred HHHHHhCCCcEEEECCCCCChHHHHH
Confidence 444444578999999966 4766553
No 69
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=91.91 E-value=0.018 Score=47.53 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=23.2
Q ss_pred cEEEecCChhHHhhcCCCCeEeeCCccccC
Q 025953 65 YAVLDVRDNSQYNRAHIKSSYHVPLFIENQ 94 (245)
Q Consensus 65 ~vLIDVR~~~Ey~~GHIPGAinIPl~~l~~ 94 (245)
.++||||++.||+ |||+|||...++.
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~ 147 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEV 147 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHH
Confidence 4899999999999 9999999887654
No 70
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=90.90 E-value=0.46 Score=37.57 Aligned_cols=29 Identities=21% Similarity=0.277 Sum_probs=20.7
Q ss_pred CCCCCeEEEEcCCC-hhHHHH--HHHHHHcCC
Q 025953 134 FSPESKLLVVCQEG-LRYIRF--CRFHRAARC 162 (245)
Q Consensus 134 l~~d~~VVVyC~~G-~RS~~a--a~~L~~~G~ 162 (245)
+..+.+|+|+|..| .||..+ +.++...|+
T Consensus 86 ~~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 86 VRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp HHTTCEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred HHcCCEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 34568999999977 787754 456666664
No 71
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=90.61 E-value=0.45 Score=36.80 Aligned_cols=28 Identities=21% Similarity=0.097 Sum_probs=19.8
Q ss_pred CCCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
..+.+|+|+|..| .||.. ++.++...|+
T Consensus 79 ~~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 79 KHGSKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred HcCCeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 3568999999977 78764 3566665553
No 72
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=89.23 E-value=0.84 Score=35.87 Aligned_cols=28 Identities=14% Similarity=0.024 Sum_probs=19.4
Q ss_pred CCCCeEEEEcCCC-hhHHHH--HHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIRF--CRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~a--a~~L~~~G~ 162 (245)
..+.+|+|+|..| .||..+ +.++...|+
T Consensus 82 ~~~~~VlVHC~aG~~RSg~~~~aylm~~~~~ 112 (160)
T 1yz4_A 82 LNGGNCLVHSFAGISRSTTIVTAYVMTVTGL 112 (160)
T ss_dssp HTTCCEEEEETTSSSHHHHHHHHHHHHHHCC
T ss_pred HcCCeEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 3468999999977 788743 445555554
No 73
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=88.74 E-value=1.1 Score=34.72 Aligned_cols=26 Identities=15% Similarity=0.292 Sum_probs=17.6
Q ss_pred CCCeEEEEcCCCh-hHHHHHHHH-HHcC
Q 025953 136 PESKLLVVCQEGL-RYIRFCRFH-RAAR 161 (245)
Q Consensus 136 ~d~~VVVyC~~G~-RS~~aa~~L-~~~G 161 (245)
++.+|+|+|..|. ||..++..+ ...|
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g 118 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQK 118 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhC
Confidence 4679999999774 777665443 4344
No 74
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=88.11 E-value=1.9 Score=35.58 Aligned_cols=34 Identities=12% Similarity=0.044 Sum_probs=20.4
Q ss_pred HHHHhhhcCCCCCeEEEEcCCC-hhHHHH-HHHHHH
Q 025953 126 FVQSVKSQFSPESKLLVVCQEG-LRYIRF-CRFHRA 159 (245)
Q Consensus 126 f~~~l~~~l~~d~~VVVyC~~G-~RS~~a-a~~L~~ 159 (245)
+++.+...+..+.+|+|+|..| .|+..+ +..|..
T Consensus 122 ~~~~i~~~~~~~~~VlVHC~aG~gRTg~~~a~~L~~ 157 (212)
T 1fpz_A 122 IMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLY 157 (212)
T ss_dssp HHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 3444444344578999999966 466654 344443
No 75
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=88.10 E-value=1.8 Score=33.48 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=19.3
Q ss_pred CCCCeEEEEcCCC-hhHHHH--HHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIRF--CRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~a--a~~L~~~G~ 162 (245)
..+.+|+|+|..| .||..+ +.++...|.
T Consensus 88 ~~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~ 118 (154)
T 2r0b_A 88 QMGGKVLVHGNAGISRSAAFVIAYIMETFGM 118 (154)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred hcCCCEEEEcCCCCChHHHHHHHHHHHHcCC
Confidence 3568999999977 687753 445555553
No 76
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=88.02 E-value=0.78 Score=35.50 Aligned_cols=27 Identities=26% Similarity=0.367 Sum_probs=18.9
Q ss_pred CCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 136 PESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 136 ~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
++.+|+|+|..| .||.. ++.++...|+
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~ 113 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHL 113 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 568999999977 78873 3445555553
No 77
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=87.50 E-value=1.1 Score=35.45 Aligned_cols=28 Identities=18% Similarity=0.231 Sum_probs=19.2
Q ss_pred CCCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
..+.+|+|+|..| .||.. ++.++...|+
T Consensus 81 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 81 LRGESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred HCCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 4568999999977 68776 3445554443
No 78
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=87.43 E-value=1.3 Score=34.04 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=18.9
Q ss_pred cCCCCCeEEEEcCCCh-hHHH--HHHHHHHcCC
Q 025953 133 QFSPESKLLVVCQEGL-RYIR--FCRFHRAARC 162 (245)
Q Consensus 133 ~l~~d~~VVVyC~~G~-RS~~--aa~~L~~~G~ 162 (245)
....+.+|+|+|..|. ||.. ++.++...|+
T Consensus 77 ~~~~~~~VlVHC~~G~~RS~~~~~aylm~~~~~ 109 (144)
T 3ezz_A 77 VKDCRGRVLVHSQAGISRSATICLAYLMMKKRV 109 (144)
T ss_dssp HHHTTCCEEEEESSSSSHHHHHHHHHHHHHHTC
T ss_pred HHhcCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 3445679999999774 7663 3444454554
No 79
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=86.87 E-value=1.2 Score=35.60 Aligned_cols=26 Identities=23% Similarity=0.400 Sum_probs=17.5
Q ss_pred CCeEEEEcCCC-hhHHH-H-HHHHHHcCC
Q 025953 137 ESKLLVVCQEG-LRYIR-F-CRFHRAARC 162 (245)
Q Consensus 137 d~~VVVyC~~G-~RS~~-a-a~~L~~~G~ 162 (245)
+.+|+|+|..| .||.. + +.++...|+
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 68999999977 47766 3 344445554
No 80
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=86.78 E-value=1.6 Score=35.58 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=20.2
Q ss_pred CCCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
..+.+|+|+|..| .||.. ++.++...|+
T Consensus 95 ~~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~ 125 (188)
T 2esb_A 95 MKQGRTLLHCAAGVSRSAALCLAYLMKYHAM 125 (188)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred HcCCEEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 3578999999977 78774 3556666664
No 81
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=86.39 E-value=1.4 Score=35.98 Aligned_cols=28 Identities=18% Similarity=0.259 Sum_probs=20.1
Q ss_pred CCCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
..+.+|+|+|..| .||.. ++.++...|+
T Consensus 101 ~~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~ 131 (190)
T 2wgp_A 101 RKHGATLVHCAAGVSRSATLCIAYLMKFHNV 131 (190)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred hcCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 3468999999977 78764 3566666664
No 82
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=86.31 E-value=1.6 Score=33.70 Aligned_cols=28 Identities=25% Similarity=0.377 Sum_probs=19.5
Q ss_pred CCCCeEEEEcCCC-hhHHHH--HHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIRF--CRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~a--a~~L~~~G~ 162 (245)
..+.+|+|+|..| .||..+ +.++...|+
T Consensus 81 ~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred HcCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 3568999999977 787764 345555553
No 83
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=85.70 E-value=0.58 Score=37.09 Aligned_cols=26 Identities=12% Similarity=-0.022 Sum_probs=22.0
Q ss_pred CceEeecCCcccchhhHhhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
.+.+.|+|-+|+|||.+++...+...
T Consensus 38 g~~~~l~G~~G~GKTtL~~~i~~~~~ 63 (180)
T 3ec2_A 38 GKGLTFVGSPGVGKTHLAVATLKAIY 63 (180)
T ss_dssp CCEEEECCSSSSSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 67899999999999999988766543
No 84
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=83.49 E-value=1.8 Score=36.29 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=20.6
Q ss_pred CCCCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 134 FSPESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 134 l~~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
+..+.+|+|+|..| .||.. +++++...|+
T Consensus 80 ~~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 80 REKGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp HHTTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred HhcCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 34568999999977 68763 4566666664
No 85
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=83.47 E-value=4.8 Score=33.07 Aligned_cols=27 Identities=22% Similarity=0.371 Sum_probs=18.8
Q ss_pred CCCeEEEEcCCC-hhHHHH--HHHHHHcCC
Q 025953 136 PESKLLVVCQEG-LRYIRF--CRFHRAARC 162 (245)
Q Consensus 136 ~d~~VVVyC~~G-~RS~~a--a~~L~~~G~ 162 (245)
++.+|+|+|..| .||..+ +.++...|.
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENM 159 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCC
Confidence 567999999977 677743 445555553
No 86
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=82.57 E-value=6.6 Score=32.76 Aligned_cols=28 Identities=25% Similarity=0.295 Sum_probs=19.2
Q ss_pred CCCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
.++.+|+|+|..| .||.. ++.++...|+
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4568999999977 67764 3445565553
No 87
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=81.70 E-value=0.66 Score=35.83 Aligned_cols=24 Identities=13% Similarity=0.022 Sum_probs=19.9
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..|.|+|-+|+|||.+++...+.
T Consensus 43 ~~~~ll~G~~G~GKT~l~~~~~~~ 66 (195)
T 1jbk_A 43 KNNPVLIGEPGVGKTAIVEGLAQR 66 (195)
T ss_dssp SCEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCceEEECCCCCCHHHHHHHHHHH
Confidence 466889999999999999876544
No 88
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=77.76 E-value=5.2 Score=30.57 Aligned_cols=29 Identities=14% Similarity=0.159 Sum_probs=18.5
Q ss_pred CCCCCeEEEEcCCCh-hHHHH--HHHHHHcCC
Q 025953 134 FSPESKLLVVCQEGL-RYIRF--CRFHRAARC 162 (245)
Q Consensus 134 l~~d~~VVVyC~~G~-RS~~a--a~~L~~~G~ 162 (245)
...+.+|+|+|..|. ||..+ +.++...|+
T Consensus 78 ~~~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~ 109 (144)
T 3s4e_A 78 KRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQT 109 (144)
T ss_dssp HHTTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred HHcCCeEEEEcCCCCchHHHHHHHHHHHHcCC
Confidence 345679999999774 76543 444554543
No 89
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=76.57 E-value=13 Score=28.40 Aligned_cols=25 Identities=12% Similarity=0.009 Sum_probs=15.6
Q ss_pred HHHHHHHHhCCCcEEEecCChhHHh
Q 025953 53 AEEAKNLIAVERYAVLDVRDNSQYN 77 (245)
Q Consensus 53 ~eeL~~ll~~~~~vLIDVR~~~Ey~ 77 (245)
.+++..+.+.+=..+||+|++.|..
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e~~ 42 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWEIE 42 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHHHH
T ss_pred HHHHHHHHHCCCCEEEEcCchhhhh
Confidence 3445444333445799999986653
No 90
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=76.05 E-value=1.3 Score=34.10 Aligned_cols=24 Identities=13% Similarity=-0.040 Sum_probs=19.2
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..|.|+|-+|+|||.+++...+.
T Consensus 43 ~~~vll~G~~G~GKT~la~~~~~~ 66 (187)
T 2p65_A 43 KNNPILLGDPGVGKTAIVEGLAIK 66 (187)
T ss_dssp SCEEEEESCGGGCHHHHHHHHHHH
T ss_pred CCceEEECCCCCCHHHHHHHHHHH
Confidence 456789999999999998766443
No 91
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=75.67 E-value=1.4 Score=35.41 Aligned_cols=24 Identities=17% Similarity=0.113 Sum_probs=19.5
Q ss_pred ceEeecCCcccchhhHhhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
.-|.|+|-+|+|||.+++..-+..
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~ 78 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANEL 78 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 578899999999999987655443
No 92
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=75.66 E-value=4.8 Score=32.83 Aligned_cols=20 Identities=25% Similarity=0.336 Sum_probs=14.9
Q ss_pred CCCCeEEEEcCCC-hhHHHHH
Q 025953 135 SPESKLLVVCQEG-LRYIRFC 154 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~aa 154 (245)
..+.+|+|.|..| .||..++
T Consensus 123 ~~~~~VlVHC~aG~~RSg~~v 143 (195)
T 2q05_A 123 QRNEPVLVHCAAGVNRSGAMI 143 (195)
T ss_dssp HTTCCEEEECSSSSSHHHHHH
T ss_pred HcCCcEEEEcCCCCChHHHHH
Confidence 3468999999977 6776553
No 93
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=74.63 E-value=4.2 Score=35.76 Aligned_cols=50 Identities=14% Similarity=0.107 Sum_probs=32.8
Q ss_pred hhhccCCCcccHHHHHHHHhCCCcEEEecCChhHHhhc----CCCCe--EeeCCcc
Q 025953 42 LKIRADVNYVNAEEAKNLIAVERYAVLDVRDNSQYNRA----HIKSS--YHVPLFI 91 (245)
Q Consensus 42 ~~~~~~~~~Is~eeL~~ll~~~~~vLIDVR~~~Ey~~G----HIPGA--inIPl~~ 91 (245)
+-+.+....++++++..+.+.+=..|||.|++.|.... ..+|. +|+|+..
T Consensus 47 lyRS~~l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~~ 102 (296)
T 1ywf_A 47 LFRSSELSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPD 102 (296)
T ss_dssp EEEESCCTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCCC
T ss_pred eeccCCcccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCcc
Confidence 44445566788999887655455589999999886532 23453 4567654
No 94
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=74.45 E-value=1.4 Score=36.10 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=17.5
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-|.+-|.+|||||++++....
T Consensus 31 kI~vvG~~~vGKSsLin~l~~ 51 (228)
T 2qu8_A 31 TIILSGAPNVGKSSFMNIVSR 51 (228)
T ss_dssp EEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 467889999999999987643
No 95
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=73.62 E-value=1.8 Score=34.43 Aligned_cols=24 Identities=8% Similarity=-0.007 Sum_probs=19.7
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..+.|+|-.|+|||++++...+.
T Consensus 45 ~~~~ll~G~~G~GKT~l~~~~~~~ 68 (250)
T 1njg_A 45 HHAYLFSGTRGVGKTSIARLLAKG 68 (250)
T ss_dssp CSEEEEECSTTSCHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHH
Confidence 347899999999999999876543
No 96
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=72.44 E-value=1.3 Score=34.77 Aligned_cols=21 Identities=10% Similarity=0.018 Sum_probs=17.4
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-|.+-|.+|||||++++...+
T Consensus 50 ~i~vvG~~g~GKSsll~~l~~ 70 (193)
T 2ged_A 50 SIIIAGPQNSGKTSLLTLLTT 70 (193)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 367889999999999987654
No 97
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=72.36 E-value=2.6 Score=37.15 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=25.7
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
.|-...++.+-|-|-+|+|||++++..-...+
T Consensus 94 ~~~~~~g~vi~lvG~nGsGKTTll~~Lag~l~ 125 (302)
T 3b9q_A 94 QLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLK 125 (302)
T ss_dssp CCCSSSCEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccccCCCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 34456678999999999999999998766544
No 98
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=71.99 E-value=1.9 Score=34.83 Aligned_cols=25 Identities=12% Similarity=0.069 Sum_probs=20.2
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+.-|.|+|-+|+|||.+++...+..
T Consensus 52 ~~~~ll~G~~G~GKT~la~~l~~~~ 76 (242)
T 3bos_A 52 VQAIYLWGPVKSGRTHLIHAACARA 76 (242)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 3568899999999999998765543
No 99
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=71.81 E-value=1.6 Score=34.49 Aligned_cols=20 Identities=5% Similarity=-0.107 Sum_probs=17.5
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.|+|-+|+|||.+++...+
T Consensus 41 ~ll~G~~G~GKT~l~~~l~~ 60 (226)
T 2chg_A 41 LLFSGPPGTGKTATAIALAR 60 (226)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 88999999999999887644
No 100
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=71.24 E-value=1.6 Score=33.50 Aligned_cols=26 Identities=12% Similarity=-0.064 Sum_probs=21.0
Q ss_pred CceEeecCCcccchhhHhhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
..-|-|+|-+|+|||.+.+...+.+.
T Consensus 24 ~~~vll~G~~GtGKt~lA~~i~~~~~ 49 (145)
T 3n70_A 24 DIAVWLYGAPGTGRMTGARYLHQFGR 49 (145)
T ss_dssp CSCEEEESSTTSSHHHHHHHHHHSST
T ss_pred CCCEEEECCCCCCHHHHHHHHHHhCC
Confidence 34589999999999999987766543
No 101
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=70.62 E-value=1.9 Score=38.11 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=21.2
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.++.+.|+|-+|+|||++++..-+.
T Consensus 50 ~~~~~ll~Gp~G~GKTTLa~~ia~~ 74 (334)
T 1in4_A 50 VLDHVLLAGPPGLGKTTLAHIIASE 74 (334)
T ss_dssp CCCCEEEESSTTSSHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHH
Confidence 4578999999999999999887554
No 102
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=70.32 E-value=1.9 Score=36.01 Aligned_cols=25 Identities=24% Similarity=0.212 Sum_probs=20.1
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.++.=|-|+|-+|+|||.+++..-+
T Consensus 47 ~~~~g~ll~G~~G~GKTtl~~~i~~ 71 (254)
T 1ixz_A 47 RIPKGVLLVGPPGVGKTHLARAVAG 71 (254)
T ss_dssp CCCSEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHH
Confidence 4455589999999999999986644
No 103
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=70.10 E-value=2.3 Score=33.87 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=23.3
Q ss_pred cccCCceEeecCCcccchhhHhhhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
-+..-++|-|-|-.|+|||++++..-..-
T Consensus 29 ~i~~Ge~v~L~G~nGaGKTTLlr~l~g~l 57 (158)
T 1htw_A 29 HTEKAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp CCSSCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred ccCCCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 34556789999999999999999775543
No 104
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=69.73 E-value=26 Score=26.68 Aligned_cols=25 Identities=8% Similarity=-0.073 Sum_probs=16.4
Q ss_pred CcccHHHHHHHHhCCCc-EEEecCCh
Q 025953 49 NYVNAEEAKNLIAVERY-AVLDVRDN 73 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~-vLIDVR~~ 73 (245)
..-+.++..+++.+.+. .|||++++
T Consensus 32 ~~~t~~~~~~~l~~~gi~~Iv~l~~~ 57 (167)
T 3s4o_A 32 SPSNLPTYIKELQHRGVRHLVRVCGP 57 (167)
T ss_dssp CGGGHHHHHHHHHTTTEEEEEECSCC
T ss_pred chhhHHHHHHHHHHCCCCEEEECCCC
Confidence 34555666666655554 69999975
No 105
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=69.47 E-value=2.1 Score=36.23 Aligned_cols=24 Identities=17% Similarity=0.182 Sum_probs=19.6
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+.-|.|+|-+|||||++.+...+.
T Consensus 50 ~~~vll~G~~GtGKT~la~~la~~ 73 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIARRLAKL 73 (310)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHH
Confidence 456889999999999998876544
No 106
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=69.33 E-value=1.9 Score=33.77 Aligned_cols=26 Identities=12% Similarity=0.083 Sum_probs=21.5
Q ss_pred CCceEeecCCcccchhhHhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
..+.+.|.|-+|+|||.+++.....-
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~~i~~~~ 60 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQAWVAQA 60 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 35678899999999999998876544
No 107
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=69.31 E-value=2.1 Score=37.17 Aligned_cols=27 Identities=11% Similarity=0.011 Sum_probs=21.8
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.+.|.-+-|+|-+|||||.+.+..-+.
T Consensus 33 ~~~p~~lLl~GppGtGKT~la~aiA~~ 59 (293)
T 3t15_A 33 IKVPLILGIWGGKGQGKSFQCELVFRK 59 (293)
T ss_dssp CCCCSEEEEEECTTSCHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 455678899999999999998866543
No 108
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=68.63 E-value=32 Score=26.68 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=18.1
Q ss_pred CcccHHHHHHHHhCCCcEEEecCChhH
Q 025953 49 NYVNAEEAKNLIAVERYAVLDVRDNSQ 75 (245)
Q Consensus 49 ~~Is~eeL~~ll~~~~~vLIDVR~~~E 75 (245)
..++.+.+..+.+.+--++|+.|+..+
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e 52 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSS 52 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTS
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCccc
Confidence 346777777776666557888886543
No 109
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=68.43 E-value=2 Score=35.85 Aligned_cols=23 Identities=4% Similarity=-0.299 Sum_probs=20.5
Q ss_pred CCceEeecCCcccchhhHhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
-+++|.|-|..|+|||++++...
T Consensus 26 ~~~~i~l~G~~GsGKSTl~k~La 48 (246)
T 2bbw_A 26 KLLRAVILGPPGSGKGTVCQRIA 48 (246)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHH
Confidence 47899999999999999998765
No 110
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=68.33 E-value=3.4 Score=37.54 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=26.5
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
-.|-+..++.|-|-|-+|+|||++++..-...+
T Consensus 150 l~l~~~~g~vi~lvG~nGsGKTTll~~Lag~l~ 182 (359)
T 2og2_A 150 LQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLK 182 (359)
T ss_dssp CCCCSSSSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cceecCCCeEEEEEcCCCChHHHHHHHHHhhcc
Confidence 345566789999999999999999998766544
No 111
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=68.24 E-value=2.6 Score=35.24 Aligned_cols=26 Identities=23% Similarity=0.103 Sum_probs=20.7
Q ss_pred cCCceEeecCCcccchhhHhhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..+.-|-|+|-+|+|||.+.+..-+.
T Consensus 43 ~~~~~vll~G~~GtGKT~la~~la~~ 68 (257)
T 1lv7_A 43 KIPKGVLMVGPPGTGKTLLAKAIAGE 68 (257)
T ss_dssp CCCCEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCeEEEECcCCCCHHHHHHHHHHH
Confidence 44566899999999999998866443
No 112
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=68.07 E-value=1.8 Score=35.73 Aligned_cols=30 Identities=10% Similarity=0.130 Sum_probs=19.1
Q ss_pred cccccccCCceEeecCCcccchhhHhhhhh
Q 025953 204 PCELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
|-.|-+...++|.|-|-+|+|||++++...
T Consensus 19 ~~sl~v~~G~ii~l~Gp~GsGKSTl~~~L~ 48 (231)
T 3lnc_A 19 PGSMLKSVGVILVLSSPSGCGKTTVANKLL 48 (231)
T ss_dssp ---CCEECCCEEEEECSCC----CHHHHHH
T ss_pred CCCcccCCCCEEEEECCCCCCHHHHHHHHH
Confidence 444555667899999999999999998765
No 113
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=67.08 E-value=2.6 Score=36.48 Aligned_cols=26 Identities=12% Similarity=-0.043 Sum_probs=21.2
Q ss_pred ccCCceEeecCCcccchhhHhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
+..+.-|-|+|-+|+|||.+.+..-+
T Consensus 46 ~~~~~~vLL~Gp~GtGKT~la~ala~ 71 (301)
T 3cf0_A 46 MTPSKGVLFYGPPGCGKTLLAKAIAN 71 (301)
T ss_dssp CCCCSEEEEECSSSSSHHHHHHHHHH
T ss_pred CCCCceEEEECCCCcCHHHHHHHHHH
Confidence 35567899999999999999876544
No 114
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=66.32 E-value=2.4 Score=36.80 Aligned_cols=25 Identities=12% Similarity=0.101 Sum_probs=21.0
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.+..|.|+|-.|+|||.+++...+.
T Consensus 44 ~~~~vli~G~~G~GKTtl~~~l~~~ 68 (386)
T 2qby_A 44 KPNNIFIYGLTGTGKTAVVKFVLSK 68 (386)
T ss_dssp CCCCEEEEECTTSSHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHH
Confidence 3568999999999999999876554
No 115
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=66.20 E-value=12 Score=34.13 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=21.8
Q ss_pred ccccCCceEeecCCcccchhhHhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
+...-+..|.|-|..|+|||++.+..
T Consensus 253 ~~~~~~~lIil~G~pGSGKSTla~~L 278 (416)
T 3zvl_A 253 LLSPNPEVVVAVGFPGAGKSTFIQEH 278 (416)
T ss_dssp SCCSSCCEEEEESCTTSSHHHHHHHH
T ss_pred cCCCCCEEEEEECCCCCCHHHHHHHH
Confidence 44556889999999999999998764
No 116
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=66.11 E-value=2.4 Score=34.14 Aligned_cols=23 Identities=9% Similarity=0.006 Sum_probs=20.0
Q ss_pred CCceEeecCCcccchhhHhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
..++|.|-|-.|+|||++++...
T Consensus 28 ~g~~i~l~G~~GsGKSTl~~~L~ 50 (200)
T 4eun_A 28 PTRHVVVMGVSGSGKTTIAHGVA 50 (200)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHH
Confidence 46789999999999999988763
No 117
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=66.03 E-value=38 Score=26.95 Aligned_cols=24 Identities=4% Similarity=0.022 Sum_probs=16.5
Q ss_pred ccHHHHHHHHhCCCc-EEEecCChh
Q 025953 51 VNAEEAKNLIAVERY-AVLDVRDNS 74 (245)
Q Consensus 51 Is~eeL~~ll~~~~~-vLIDVR~~~ 74 (245)
-+.++..+++.+.+. .|||++++.
T Consensus 48 ~t~~~~~~~L~~~gi~~Iv~l~~~~ 72 (189)
T 3rz2_A 48 ATLNKFIEELKKYGVTTIVRVCEAT 72 (189)
T ss_dssp TTHHHHHHHHHTTTEEEEEECSCCC
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCc
Confidence 566667676665554 699999753
No 118
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=65.72 E-value=2.2 Score=35.36 Aligned_cols=20 Identities=10% Similarity=-0.104 Sum_probs=17.1
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.|-|.+|||||++++..-.
T Consensus 32 i~lvG~~g~GKStlin~l~g 51 (239)
T 3lxx_A 32 IVLVGKTGAGKSATGNSILG 51 (239)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHcC
Confidence 67889999999999987544
No 119
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=65.71 E-value=3.1 Score=34.40 Aligned_cols=26 Identities=19% Similarity=0.068 Sum_probs=20.6
Q ss_pred ccCCceEeecCCcccchhhHhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
+..+.-|-|+|-+|+|||.+.+..-+
T Consensus 36 ~~~~~~vll~G~~GtGKT~la~~la~ 61 (262)
T 2qz4_A 36 AKVPKGALLLGPPGCGKTLLAKAVAT 61 (262)
T ss_dssp CCCCCEEEEESCTTSSHHHHHHHHHH
T ss_pred CCCCceEEEECCCCCCHHHHHHHHHH
Confidence 34556689999999999999876543
No 120
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=65.58 E-value=2.8 Score=35.36 Aligned_cols=25 Identities=16% Similarity=0.045 Sum_probs=20.3
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
..+.-|-|+|-+|+|||.+.+...+
T Consensus 49 ~~~~~~ll~G~~GtGKT~la~~la~ 73 (285)
T 3h4m_A 49 EPPKGILLYGPPGTGKTLLAKAVAT 73 (285)
T ss_dssp CCCSEEEEESSSSSSHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCcHHHHHHHHHH
Confidence 4456699999999999999887643
No 121
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=65.33 E-value=7.3 Score=30.87 Aligned_cols=26 Identities=15% Similarity=0.140 Sum_probs=17.0
Q ss_pred CCCeEEEEcCCC-hhHHHH--HHHHHHcC
Q 025953 136 PESKLLVVCQEG-LRYIRF--CRFHRAAR 161 (245)
Q Consensus 136 ~d~~VVVyC~~G-~RS~~a--a~~L~~~G 161 (245)
.+.+|+|+|..| .||..+ +.++...|
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~ 135 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNK 135 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCC
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhC
Confidence 367999999966 676654 34444443
No 122
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=65.05 E-value=2 Score=34.66 Aligned_cols=23 Identities=9% Similarity=0.133 Sum_probs=18.6
Q ss_pred ceEeecCCcccchhhHhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-.|.+-|..|||||++++..-+.
T Consensus 31 ~~i~i~G~~g~GKTTl~~~l~~~ 53 (221)
T 2wsm_A 31 VAVNIMGAIGSGKTLLIERTIER 53 (221)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHH
Confidence 35777899999999999886543
No 123
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=65.01 E-value=2.3 Score=38.05 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=19.7
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
...|.|-|.+|+|||+++|..-.
T Consensus 74 ~~~v~lvG~pgaGKSTLln~L~~ 96 (349)
T 2www_A 74 AFRVGLSGPPGAGKSTFIEYFGK 96 (349)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHH
Confidence 34789999999999999998754
No 124
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=64.83 E-value=2.6 Score=33.42 Aligned_cols=21 Identities=24% Similarity=0.203 Sum_probs=17.3
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
=|.+-|.+|||||++++....
T Consensus 30 ki~v~G~~~~GKSsli~~l~~ 50 (199)
T 2p5s_A 30 KIVLAGDAAVGKSSFLMRLCK 50 (199)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 467779999999999987643
No 125
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=64.57 E-value=3.5 Score=36.37 Aligned_cols=27 Identities=15% Similarity=-0.017 Sum_probs=22.6
Q ss_pred CCceEeecCCcccchhhHhhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
-+++|-|-|-+|+|||++++..-..-+
T Consensus 101 ~g~vi~lvG~nGsGKTTll~~Lagll~ 127 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIAKLGRYYQ 127 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHH
Confidence 478999999999999999998765443
No 126
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=64.48 E-value=3.2 Score=35.26 Aligned_cols=25 Identities=24% Similarity=0.212 Sum_probs=20.0
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.++.=|-|+|-+|+|||++++..-+
T Consensus 71 ~~~~gvll~Gp~GtGKTtl~~~i~~ 95 (278)
T 1iy2_A 71 RIPKGVLLVGPPGVGKTHLARAVAG 95 (278)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHHHHHHH
Confidence 3444589999999999999987654
No 127
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=64.48 E-value=2.1 Score=34.68 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=16.3
Q ss_pred EeecCCcccchhhHhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (245)
|.+-|..|||||++++..-..
T Consensus 41 i~ivG~~gvGKTtl~~~l~~~ 61 (226)
T 2hf9_A 41 FDFMGAIGSGKTLLIEKLIDN 61 (226)
T ss_dssp EEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHH
Confidence 444599999999999876543
No 128
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=64.35 E-value=2.3 Score=36.33 Aligned_cols=23 Identities=4% Similarity=-0.048 Sum_probs=18.3
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
+.-|.|+|-+|||||.+.+...+
T Consensus 67 ~~~vll~G~~GtGKT~la~~la~ 89 (309)
T 3syl_A 67 TLHMSFTGNPGTGKTTVALKMAG 89 (309)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHH
Confidence 34588999999999999975433
No 129
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=64.31 E-value=2.7 Score=34.39 Aligned_cols=24 Identities=17% Similarity=0.039 Sum_probs=20.5
Q ss_pred cCCceEeecCCcccchhhHhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
..-+++-|-|-+|+|||++++..-
T Consensus 28 ~~G~~~~l~GpnGsGKSTLl~~i~ 51 (251)
T 2ehv_A 28 PEGTTVLLTGGTGTGKTTFAAQFI 51 (251)
T ss_dssp ETTCEEEEECCTTSSHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHH
Confidence 346789999999999999998654
No 130
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=64.22 E-value=2.4 Score=33.46 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=17.1
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.+-|.+|||||++++....
T Consensus 31 i~v~G~~~vGKSsli~~l~~ 50 (196)
T 2atv_A 31 LAIFGRAGVGKSALVVRFLT 50 (196)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 67789999999999987654
No 131
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=64.22 E-value=5.8 Score=30.84 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=19.3
Q ss_pred CCCCCeEEEEcCCC-hhHHHH--HHHHHHcCC
Q 025953 134 FSPESKLLVVCQEG-LRYIRF--CRFHRAARC 162 (245)
Q Consensus 134 l~~d~~VVVyC~~G-~RS~~a--a~~L~~~G~ 162 (245)
...+.+|+|+|..| .||..+ +.++...|+
T Consensus 82 ~~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 82 LSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred HHcCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 33568999999977 787744 444444553
No 132
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=63.92 E-value=3.4 Score=35.94 Aligned_cols=26 Identities=12% Similarity=-0.004 Sum_probs=21.3
Q ss_pred CCceEeecCCcccchhhHhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
.+..|.|+|-+|+|||.+++...+..
T Consensus 43 ~~~~vll~G~~G~GKT~l~~~~~~~~ 68 (387)
T 2v1u_A 43 KPSNALLYGLTGTGKTAVARLVLRRL 68 (387)
T ss_dssp CCCCEEECBCTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 45678999999999999998775543
No 133
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=63.83 E-value=3 Score=35.02 Aligned_cols=25 Identities=12% Similarity=-0.148 Sum_probs=20.1
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+.-|-|+|-+|||||.+.+...+.+
T Consensus 29 ~~~vll~G~~GtGKt~la~~i~~~~ 53 (265)
T 2bjv_A 29 DKPVLIIGERGTGKELIASRLHYLS 53 (265)
T ss_dssp CSCEEEECCTTSCHHHHHHHHHHTS
T ss_pred CCCEEEECCCCCcHHHHHHHHHHhc
Confidence 3568899999999999987765543
No 134
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=63.64 E-value=2 Score=32.90 Aligned_cols=24 Identities=8% Similarity=-0.189 Sum_probs=19.1
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..-|-|+|-+|+|||.+.+...+.
T Consensus 27 ~~~vll~G~~GtGKt~lA~~i~~~ 50 (143)
T 3co5_A 27 TSPVFLTGEAGSPFETVARYFHKN 50 (143)
T ss_dssp SSCEEEEEETTCCHHHHHGGGCCT
T ss_pred CCcEEEECCCCccHHHHHHHHHHh
Confidence 345889999999999998766544
No 135
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=63.63 E-value=3.6 Score=33.49 Aligned_cols=21 Identities=19% Similarity=0.126 Sum_probs=18.1
Q ss_pred CceEeecCCcccchhhHhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~ 232 (245)
-+.+.+.|-+|+|||.|..+.
T Consensus 30 G~l~~i~G~pG~GKT~l~l~~ 50 (251)
T 2zts_A 30 GTTVLLTGGTGTGKTTFAAQF 50 (251)
T ss_dssp TCEEEEECCTTSSHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHH
Confidence 468999999999999997663
No 136
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=63.60 E-value=2.5 Score=36.29 Aligned_cols=23 Identities=9% Similarity=-0.034 Sum_probs=19.9
Q ss_pred ceEeecCCcccchhhHhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..|.|+|-.|+|||++++...+.
T Consensus 31 ~~v~i~G~~G~GKT~L~~~~~~~ 53 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIKIGINE 53 (357)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHh
Confidence 48999999999999999877553
No 137
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=63.49 E-value=2.5 Score=34.89 Aligned_cols=18 Identities=22% Similarity=0.036 Sum_probs=16.2
Q ss_pred EeecCCcccchhhHhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~ 232 (245)
|.|-|.+|||||++++..
T Consensus 40 VvlvG~~~vGKSSLl~r~ 57 (211)
T 2g3y_A 40 VVLIGEQGVGKSTLANIF 57 (211)
T ss_dssp EEEECCTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 788899999999999875
No 138
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=63.34 E-value=3.2 Score=35.78 Aligned_cols=27 Identities=22% Similarity=0.065 Sum_probs=21.5
Q ss_pred cccCCceEeecCCcccchhhHhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-+.++.=|-|+|-.|+|||.+++-.-.
T Consensus 40 ~l~~~~GvlL~Gp~GtGKTtLakala~ 66 (274)
T 2x8a_A 40 GLVTPAGVLLAGPPGCGKTLLAKAVAN 66 (274)
T ss_dssp TCCCCSEEEEESSTTSCHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCCcHHHHHHHHHH
Confidence 345566699999999999999987643
No 139
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=63.30 E-value=2.7 Score=37.16 Aligned_cols=27 Identities=19% Similarity=0.214 Sum_probs=22.7
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..-+++|-|-|.+|+|||++++.....
T Consensus 87 ~~~g~ivgI~G~sGsGKSTL~~~L~gl 113 (312)
T 3aez_A 87 RPVPFIIGVAGSVAVGKSTTARVLQAL 113 (312)
T ss_dssp SCCCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCchHHHHHHHHHhh
Confidence 456789999999999999999876554
No 140
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=63.24 E-value=5.3 Score=35.31 Aligned_cols=29 Identities=7% Similarity=-0.104 Sum_probs=23.6
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
...++.|-+-|.+|+|||+++.+.-..-.
T Consensus 101 ~~~~~vi~ivG~~GsGKTTl~~~LA~~l~ 129 (306)
T 1vma_A 101 PEPPFVIMVVGVNGTGKTTSCGKLAKMFV 129 (306)
T ss_dssp SSSCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCChHHHHHHHHHHHHH
Confidence 45678899999999999999988765443
No 141
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=63.10 E-value=3.3 Score=36.31 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=20.3
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
..-|.|+|-+|||||.++....+..
T Consensus 152 ~~~lll~G~~GtGKT~La~aia~~~ 176 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLAAMAHEL 176 (308)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHH
Confidence 4678999999999999987655543
No 142
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=62.99 E-value=3.1 Score=36.40 Aligned_cols=26 Identities=15% Similarity=0.001 Sum_probs=21.8
Q ss_pred cCCceEeecCCcccchhhHhhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.-+.+|-|-|.+|+|||++.+..+..
T Consensus 29 ~~~~ii~I~G~sGsGKSTla~~L~~~ 54 (290)
T 1odf_A 29 KCPLFIFFSGPQGSGKSFTSIQIYNH 54 (290)
T ss_dssp CSCEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 45778999999999999999876554
No 143
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=62.94 E-value=4.5 Score=35.40 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=24.2
Q ss_pred cCCceEeecCCcccchhhHhhhhhhhhhhhhc
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQHASQMAKG 241 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (245)
.-++.|.+-|.+|||||+++.+.-......+|
T Consensus 103 ~~g~vi~lvG~~GsGKTTl~~~LA~~l~~~~G 134 (296)
T 2px0_A 103 IHSKYIVLFGSTGAGKTTTLAKLAAISMLEKH 134 (296)
T ss_dssp CCSSEEEEEESTTSSHHHHHHHHHHHHHHTTC
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHHHhcC
Confidence 34678888899999999999988665443334
No 144
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=62.65 E-value=2.4 Score=33.77 Aligned_cols=21 Identities=24% Similarity=0.129 Sum_probs=17.3
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|.|-|..|||||++++....
T Consensus 31 kv~lvG~~g~GKSTLl~~l~~ 51 (191)
T 1oix_A 31 KVVLIGDSGVGKSNLLSRFTR 51 (191)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 467889999999999987543
No 145
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=62.54 E-value=3.4 Score=36.21 Aligned_cols=24 Identities=8% Similarity=-0.256 Sum_probs=20.4
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..|.|+|-+|+|||.+++...+.
T Consensus 45 ~~~vll~G~~G~GKT~la~~l~~~ 68 (384)
T 2qby_B 45 KFSNLFLGLTGTGKTFVSKYIFNE 68 (384)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCHHHHHHHHHHH
Confidence 567999999999999999877554
No 146
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=62.38 E-value=2.5 Score=35.43 Aligned_cols=24 Identities=25% Similarity=0.099 Sum_probs=19.1
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.-|-|+|-+|+|||.+.+..-.
T Consensus 43 ~~~~vll~G~~GtGKT~la~~la~ 66 (268)
T 2r62_A 43 IPKGVLLVGPPGTGKTLLAKAVAG 66 (268)
T ss_dssp CCSCCCCBCSSCSSHHHHHHHHHH
T ss_pred CCceEEEECCCCCcHHHHHHHHHH
Confidence 344588999999999999876543
No 147
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=62.26 E-value=3.5 Score=35.27 Aligned_cols=27 Identities=7% Similarity=0.149 Sum_probs=21.9
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..-+++.|-|-+|+|||++++..-..
T Consensus 32 l~~G~~~~i~G~~G~GKTTl~~~ia~~ 58 (296)
T 1cr0_A 32 ARGGEVIMVTSGSGMGKSTFVRQQALQ 58 (296)
T ss_dssp BCTTCEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 344579999999999999999876443
No 148
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=62.23 E-value=3.8 Score=35.80 Aligned_cols=22 Identities=14% Similarity=-0.046 Sum_probs=19.0
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.+.|+|-+|+|||.+++.+.+.
T Consensus 46 ~~li~G~~G~GKTtl~~~l~~~ 67 (389)
T 1fnn_A 46 RATLLGRPGTGKTVTLRKLWEL 67 (389)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHH
Confidence 6889999999999999876543
No 149
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=61.88 E-value=3.3 Score=35.89 Aligned_cols=25 Identities=12% Similarity=0.171 Sum_probs=20.2
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+.-+.|+|-+|+|||.+++..-+..
T Consensus 37 ~~~lll~G~~GtGKT~la~~i~~~~ 61 (324)
T 1l8q_A 37 YNPIFIYGSVGTGKTHLLQAAGNEA 61 (324)
T ss_dssp CSSEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHH
Confidence 4568899999999999998765543
No 150
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=61.81 E-value=3.2 Score=35.50 Aligned_cols=22 Identities=18% Similarity=0.157 Sum_probs=19.2
Q ss_pred ceEeecCCcccchhhHhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
..|.|+|-.|+|||++++...+
T Consensus 32 ~~v~i~G~~G~GKT~Ll~~~~~ 53 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLLRAFLN 53 (350)
T ss_dssp SEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCcCCHHHHHHHHHH
Confidence 5899999999999999987654
No 151
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=61.65 E-value=3.9 Score=36.11 Aligned_cols=25 Identities=12% Similarity=-0.076 Sum_probs=20.5
Q ss_pred CCceEee--cCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDL--NPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~--~~~~~~~~~~~~~~~~~~ 235 (245)
.+..+.| +|-.|+|||.+++...+.
T Consensus 49 ~~~~~li~i~G~~G~GKT~L~~~~~~~ 75 (412)
T 1w5s_A 49 SDVNMIYGSIGRVGIGKTTLAKFTVKR 75 (412)
T ss_dssp CCEEEEEECTTCCSSSHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcCCCCHHHHHHHHHHH
Confidence 3567888 999999999999876543
No 152
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=61.04 E-value=3.5 Score=36.67 Aligned_cols=26 Identities=12% Similarity=0.102 Sum_probs=20.9
Q ss_pred cccCCceEeecCCcccchhhHhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.+| .|.+=|.+|||||++|+..-.
T Consensus 31 ~~~lp-~I~vvG~~~sGKSSLln~l~g 56 (360)
T 3t34_A 31 WDSLP-AIAVVGGQSSGKSSVLESIVG 56 (360)
T ss_dssp -CCCC-EEEEECBTTSSHHHHHHHHHT
T ss_pred cccCC-EEEEECCCCCcHHHHHHHHhC
Confidence 35566 788889999999999998755
No 153
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=60.81 E-value=4.2 Score=34.56 Aligned_cols=24 Identities=8% Similarity=-0.150 Sum_probs=20.0
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.-|-|+|-+|+|||.+.+...+
T Consensus 53 ~~~~vll~Gp~GtGKT~la~~la~ 76 (297)
T 3b9p_A 53 PAKGLLLFGPPGNGKTLLARAVAT 76 (297)
T ss_dssp CCSEEEEESSSSSCHHHHHHHHHH
T ss_pred CCCeEEEECcCCCCHHHHHHHHHH
Confidence 356789999999999999886644
No 154
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=60.73 E-value=16 Score=28.59 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=18.8
Q ss_pred CCCCCeEEEEcCCCh-hHHH--HHHHHHHcCC
Q 025953 134 FSPESKLLVVCQEGL-RYIR--FCRFHRAARC 162 (245)
Q Consensus 134 l~~d~~VVVyC~~G~-RS~~--aa~~L~~~G~ 162 (245)
+..+.+|+|.|..|. ||.. ++.++...|+
T Consensus 84 ~~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~ 115 (161)
T 3emu_A 84 IQRKEGVLIISGTGVNKAPAIVIAFLMYYQRL 115 (161)
T ss_dssp HHTTCEEEEEESSSSSHHHHHHHHHHHHHTTC
T ss_pred HhcCCeEEEEcCCCCcHHHHHHHHHHHHHhCC
Confidence 344689999999774 7543 3555555553
No 155
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=59.83 E-value=3.9 Score=34.45 Aligned_cols=25 Identities=20% Similarity=0.094 Sum_probs=20.6
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
..|..|.|.|..|+|||++.+....
T Consensus 30 ~~~~~i~l~G~~GsGKSTla~~L~~ 54 (253)
T 2p5t_B 30 KQPIAILLGGQSGAGKTTIHRIKQK 54 (253)
T ss_dssp SSCEEEEEESCGGGTTHHHHHHHHH
T ss_pred cCCeEEEEECCCCCCHHHHHHHHHH
Confidence 3467899999999999999876543
No 156
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=59.73 E-value=3.6 Score=33.02 Aligned_cols=23 Identities=4% Similarity=-0.018 Sum_probs=18.5
Q ss_pred eEeecCCcccchhhHhhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
=|.+-|.+|||||++++......
T Consensus 31 ~i~v~G~~~~GKSslin~l~~~~ 53 (223)
T 4dhe_A 31 EIAFAGRSNAGKSTAINVLCNQK 53 (223)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCS
T ss_pred EEEEEcCCCCCHHHHHHHHhCCC
Confidence 35677999999999999876544
No 157
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=59.36 E-value=2.5 Score=33.55 Aligned_cols=19 Identities=21% Similarity=0.032 Sum_probs=16.3
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.+-|..|||||++++...
T Consensus 36 i~vvG~~~~GKSsli~~l~ 54 (199)
T 3l0i_B 36 LLLIGDSGVGKSCLLLRFA 54 (199)
T ss_dssp EEEECCTTSCCTTTTTSSB
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 5677999999999998764
No 158
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=58.70 E-value=4.9 Score=35.86 Aligned_cols=28 Identities=7% Similarity=0.010 Sum_probs=23.3
Q ss_pred cCCceEeecCCcccchhhHhhhhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
.-+++|-|-|-+|+|||++++..-..-+
T Consensus 127 ~~g~vi~lvG~nGaGKTTll~~Lag~l~ 154 (328)
T 3e70_C 127 EKPYVIMFVGFNGSGKTTTIAKLANWLK 154 (328)
T ss_dssp CSSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999998765443
No 159
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=58.47 E-value=3.6 Score=34.75 Aligned_cols=30 Identities=3% Similarity=-0.012 Sum_probs=24.7
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++-|-|-+|+|||++|+-..-
T Consensus 21 vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 50 (243)
T 1mv5_A 21 ISFEAQPNSIIAFAGPSGGGKSTIFSLLER 50 (243)
T ss_dssp EEEEECTTEEEEEECCTTSSHHHHHHHHTT
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 445667778999999999999999987643
No 160
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=58.39 E-value=3.1 Score=33.64 Aligned_cols=20 Identities=20% Similarity=0.041 Sum_probs=17.0
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.+-|.+|||||++++....
T Consensus 37 i~vvG~~~vGKSsli~~l~~ 56 (214)
T 2j1l_A 37 VVLVGDGGCGKTSLLMVFAD 56 (214)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EEEECcCCCCHHHHHHHHHc
Confidence 67789999999999987653
No 161
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=58.39 E-value=3.1 Score=32.98 Aligned_cols=19 Identities=11% Similarity=0.093 Sum_probs=16.7
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.+-|.+|||||++++...
T Consensus 32 i~v~G~~~vGKSsLi~~l~ 50 (192)
T 2b6h_A 32 ILMVGLDAAGKTTILYKLK 50 (192)
T ss_dssp EEEEESTTSSHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 7788999999999998764
No 162
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=58.08 E-value=4.2 Score=34.29 Aligned_cols=30 Identities=13% Similarity=0.097 Sum_probs=24.3
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 24 vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 53 (237)
T 2cbz_A 24 ITFSIPEGALVAVVGQVGCGKSSLLSALLA 53 (237)
T ss_dssp EEEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eEEEECCCCEEEEECCCCCCHHHHHHHHhc
Confidence 345566678999999999999999987643
No 163
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=58.03 E-value=4.3 Score=36.24 Aligned_cols=25 Identities=0% Similarity=0.069 Sum_probs=20.6
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.+.-+-|+|-+|||||.+.+.+-+.
T Consensus 44 ~~~~lli~GpPGTGKT~~v~~v~~~ 68 (318)
T 3te6_A 44 QNKLFYITNADDSTKFQLVNDVMDE 68 (318)
T ss_dssp CCCEEEEECCCSHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHH
Confidence 4667889999999999998876544
No 164
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=58.03 E-value=3.9 Score=35.43 Aligned_cols=22 Identities=5% Similarity=0.014 Sum_probs=18.5
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-|-|+|-+|||||.+.+...+.
T Consensus 57 ~vll~G~~GtGKT~la~~ia~~ 78 (338)
T 3pfi_A 57 HILFSGPAGLGKTTLANIISYE 78 (338)
T ss_dssp CEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEECcCCCCHHHHHHHHHHH
Confidence 4889999999999999877443
No 165
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=57.74 E-value=3.2 Score=33.53 Aligned_cols=21 Identities=10% Similarity=0.032 Sum_probs=17.4
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-|.+-|..|||||++++....
T Consensus 30 ki~vvG~~~vGKSsLi~~l~~ 50 (205)
T 1gwn_A 30 KIVVVGDSQCGKTALLHVFAK 50 (205)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 367789999999999987654
No 166
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=57.26 E-value=6.3 Score=35.04 Aligned_cols=25 Identities=12% Similarity=-0.019 Sum_probs=21.3
Q ss_pred ccCCceEeecCCcccchhhHhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
..-.++|.|-|.+|+|||++|+..-
T Consensus 52 ~~~g~~v~i~G~~GaGKSTLl~~l~ 76 (337)
T 2qm8_A 52 TGRAIRVGITGVPGVGKSTTIDALG 76 (337)
T ss_dssp CCCSEEEEEECCTTSCHHHHHHHHH
T ss_pred cCCCeEEEEECCCCCCHHHHHHHHH
Confidence 3456799999999999999999764
No 167
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=57.25 E-value=4.3 Score=35.19 Aligned_cols=23 Identities=13% Similarity=-0.006 Sum_probs=19.6
Q ss_pred CCceEeecCCcccchhhHhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
-|..|.|.|..|+|||++.+...
T Consensus 32 ~~~livl~G~sGsGKSTla~~L~ 54 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRSAIF 54 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHH
Confidence 46789999999999999987653
No 168
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=57.14 E-value=3.8 Score=35.44 Aligned_cols=23 Identities=9% Similarity=-0.185 Sum_probs=19.2
Q ss_pred eEeecCCcccchhhHhhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
-|-|+|-+|+|||.+.+...+..
T Consensus 47 ~vLl~G~~GtGKT~la~~la~~~ 69 (350)
T 1g8p_A 47 GVLVFGDRGTGKSTAVRALAALL 69 (350)
T ss_dssp CEEEECCGGGCTTHHHHHHHHHS
T ss_pred eEEEECCCCccHHHHHHHHHHhC
Confidence 38999999999999998765544
No 169
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=57.12 E-value=3.7 Score=35.89 Aligned_cols=29 Identities=17% Similarity=0.122 Sum_probs=23.0
Q ss_pred ceEeecCCcccchhhHhhhhhhhhhhhhcc
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHASQMAKGE 242 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (245)
+.+.|-|-+|||||++||... ......|+
T Consensus 166 ~i~~l~G~sG~GKSTLln~l~-~~~~~~G~ 194 (302)
T 2yv5_A 166 FICILAGPSGVGKSSILSRLT-GEELRTQE 194 (302)
T ss_dssp CEEEEECSTTSSHHHHHHHHH-SCCCCCSC
T ss_pred cEEEEECCCCCCHHHHHHHHH-HhhCcccc
Confidence 578888999999999999887 55555554
No 170
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=57.09 E-value=4.4 Score=31.57 Aligned_cols=24 Identities=8% Similarity=-0.076 Sum_probs=19.9
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+.+..|.|-+|+|||.+|.-..-+
T Consensus 23 ~g~~~I~G~NGsGKStil~Ai~~~ 46 (149)
T 1f2t_A 23 EGINLIIGQNGSGKSSLLDAILVG 46 (149)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHH
Confidence 458889999999999999876543
No 171
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=56.83 E-value=5.4 Score=35.03 Aligned_cols=26 Identities=12% Similarity=-0.178 Sum_probs=21.0
Q ss_pred cCCceEeecCCcccchhhHhhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..+.-|-|+|-+|+|||.+.+...+.
T Consensus 43 ~~~~~iLL~GppGtGKT~la~ala~~ 68 (322)
T 1xwi_A 43 TPWRGILLFGPPGTGKSYLAKAVATE 68 (322)
T ss_dssp CCCSEEEEESSSSSCHHHHHHHHHHH
T ss_pred CCCceEEEECCCCccHHHHHHHHHHH
Confidence 34578999999999999998766543
No 172
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=56.80 E-value=4.5 Score=34.05 Aligned_cols=24 Identities=13% Similarity=-0.089 Sum_probs=19.4
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.-|-|+|-+|+|||.+.+..-+
T Consensus 63 ~~~~vLl~G~~GtGKT~la~~ia~ 86 (272)
T 1d2n_A 63 PLVSVLLEGPPHSGKTALAAKIAE 86 (272)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHH
Confidence 445789999999999999876544
No 173
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=56.75 E-value=9.1 Score=30.44 Aligned_cols=28 Identities=25% Similarity=0.377 Sum_probs=19.6
Q ss_pred CCCCeEEEEcCCC-hhHHHH--HHHHHHcCC
Q 025953 135 SPESKLLVVCQEG-LRYIRF--CRFHRAARC 162 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~a--a~~L~~~G~ 162 (245)
..+.+|+|+|..| .||..+ +.++...|+
T Consensus 85 ~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred hcCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 3568999999977 687764 445555664
No 174
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=56.62 E-value=5 Score=35.61 Aligned_cols=25 Identities=8% Similarity=-0.085 Sum_probs=19.7
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.+.-|.|+|-+|||||.+.+...+.
T Consensus 71 ~~~~ill~Gp~GtGKT~la~~la~~ 95 (376)
T 1um8_A 71 SKSNILLIGPTGSGKTLMAQTLAKH 95 (376)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHH
Confidence 3446889999999999998765543
No 175
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=56.50 E-value=4.3 Score=34.27 Aligned_cols=29 Identities=17% Similarity=0.122 Sum_probs=23.3
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 26 sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G 54 (240)
T 1ji0_A 26 DLKVPRGQIVTLIGANGAGKTTTLSAIAG 54 (240)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 34555668999999999999999987643
No 176
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=56.47 E-value=4 Score=36.89 Aligned_cols=24 Identities=4% Similarity=0.059 Sum_probs=19.7
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
...|.|-|++|||||+++|..-..
T Consensus 179 ~~~V~lvG~~naGKSTLln~L~~~ 202 (364)
T 2qtf_A 179 IPSIGIVGYTNSGKTSLFNSLTGL 202 (364)
T ss_dssp CCEEEEECBTTSSHHHHHHHHHCC
T ss_pred CcEEEEECCCCCCHHHHHHHHHCC
Confidence 345889999999999999976543
No 177
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=56.18 E-value=7 Score=34.65 Aligned_cols=31 Identities=10% Similarity=-0.048 Sum_probs=24.2
Q ss_pred ccccCCceEeecCCcccchhhHhhhhhhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
|....++.|.+-|-+|+|||+++.+.-..-.
T Consensus 100 ~~~~~~~vI~ivG~~G~GKTT~~~~LA~~l~ 130 (320)
T 1zu4_A 100 FKENRLNIFMLVGVNGTGKTTSLAKMANYYA 130 (320)
T ss_dssp CCTTSCEEEEEESSTTSSHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3345677888889999999999998865543
No 178
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=56.08 E-value=4.4 Score=34.67 Aligned_cols=25 Identities=12% Similarity=0.030 Sum_probs=20.1
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+.-|.|+|-+|||||.+.+...+.+
T Consensus 38 ~~~vll~G~~GtGKT~la~~i~~~~ 62 (324)
T 1hqc_A 38 LEHLLLFGPPGLGKTTLAHVIAHEL 62 (324)
T ss_dssp CCCCEEECCTTCCCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Confidence 3458899999999999998775543
No 179
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=55.93 E-value=4.7 Score=34.39 Aligned_cols=29 Identities=7% Similarity=-0.003 Sum_probs=23.3
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-+--
T Consensus 27 sl~i~~Ge~~~liG~nGsGKSTLlk~l~G 55 (257)
T 1g6h_A 27 SISVNKGDVTLIIGPNGSGKSTLINVITG 55 (257)
T ss_dssp CCEEETTCEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEeCCCEEEEECCCCCCHHHHHHHHhC
Confidence 34555668999999999999999987643
No 180
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=55.78 E-value=4.2 Score=32.95 Aligned_cols=21 Identities=19% Similarity=0.161 Sum_probs=17.2
Q ss_pred EeecCCcccchhhHhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (245)
|.+-|..|||||++++...+.
T Consensus 30 i~vvG~~~vGKSsL~~~l~~~ 50 (214)
T 3q3j_B 30 LVLVGDVQCGKTAMLQVLAKD 50 (214)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECcCCCCHHHHHHHHhcC
Confidence 567799999999999876543
No 181
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=55.71 E-value=3.9 Score=32.65 Aligned_cols=20 Identities=15% Similarity=0.155 Sum_probs=16.9
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.+-|..|||||++++....
T Consensus 32 i~vvG~~~vGKSsli~~l~~ 51 (201)
T 2hup_A 32 LVLVGDASVGKTCVVQRFKT 51 (201)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECcCCCCHHHHHHHHhh
Confidence 66779999999999987643
No 182
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=55.64 E-value=6.7 Score=37.43 Aligned_cols=31 Identities=13% Similarity=0.049 Sum_probs=24.7
Q ss_pred ccccCCceEeecCCcccchhhHhhhhhhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
|-+.-+.+|-|-|-+|+|||++++..-....
T Consensus 288 l~i~~GeVI~LVGpNGSGKTTLl~~LAgll~ 318 (503)
T 2yhs_A 288 VEGKAPFVILMVGVNGVGKTTTIGKLARQFE 318 (503)
T ss_dssp CCSCTTEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred eeccCCeEEEEECCCcccHHHHHHHHHHHhh
Confidence 4455678999999999999999998765433
No 183
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=55.48 E-value=4 Score=34.10 Aligned_cols=28 Identities=21% Similarity=0.221 Sum_probs=23.0
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+..-+++-|-|-+|+|||++|+-.-
T Consensus 24 sl~i~~Ge~~~iiG~nGsGKSTLl~~l~ 51 (224)
T 2pcj_A 24 SLSVKKGEFVSIIGASGSGKSTLLYILG 51 (224)
T ss_dssp EEEEETTCEEEEEECTTSCHHHHHHHHT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 3455667899999999999999998654
No 184
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=55.27 E-value=4.2 Score=33.93 Aligned_cols=28 Identities=14% Similarity=0.300 Sum_probs=22.9
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+..-+++-|-|-+|+|||++|+-.-
T Consensus 29 sl~i~~Ge~~~iiG~NGsGKSTLlk~l~ 56 (214)
T 1sgw_A 29 TMTIEKGNVVNFHGPNGIGKTTLLKTIS 56 (214)
T ss_dssp EEEEETTCCEEEECCTTSSHHHHHHHHT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 4455666789999999999999998764
No 185
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=55.16 E-value=3.8 Score=32.81 Aligned_cols=19 Identities=16% Similarity=0.022 Sum_probs=15.7
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.+-|.+|||||++++...
T Consensus 33 i~vvG~~~~GKSsLi~~l~ 51 (204)
T 4gzl_A 33 CVVVGDGAVGKTCLLISYT 51 (204)
T ss_dssp EEEEESTTSSHHHHHHHHH
T ss_pred EEEECcCCCCHHHHHHHHH
Confidence 5678999999999996554
No 186
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=55.11 E-value=4.2 Score=36.19 Aligned_cols=21 Identities=24% Similarity=0.208 Sum_probs=18.0
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-|.+-|.+|||||++++..-.
T Consensus 169 ~v~lvG~~gvGKSTLin~L~~ 189 (357)
T 2e87_A 169 TVVIAGHPNVGKSTLLKALTT 189 (357)
T ss_dssp EEEEECSTTSSHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 577889999999999987654
No 187
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=54.84 E-value=5.1 Score=33.70 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=23.5
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 25 sl~i~~Ge~~~iiG~nGsGKSTLl~~l~G 53 (235)
T 3tif_A 25 NLNIKEGEFVSIMGPSGSGKSTMLNIIGC 53 (235)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eEEEcCCCEEEEECCCCCcHHHHHHHHhc
Confidence 34556678999999999999999986643
No 188
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=54.39 E-value=4.5 Score=35.08 Aligned_cols=22 Identities=5% Similarity=-0.016 Sum_probs=18.5
Q ss_pred ceEeecCCcccchhhHhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-|-|+|-+|+|||.+.+...+
T Consensus 47 ~~vll~G~pGtGKT~la~~la~ 68 (331)
T 2r44_A 47 GHILLEGVPGLAKTLSVNTLAK 68 (331)
T ss_dssp CCEEEESCCCHHHHHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHH
Confidence 4588999999999999887654
No 189
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=54.22 E-value=6 Score=35.13 Aligned_cols=25 Identities=16% Similarity=-0.097 Sum_probs=20.5
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
..+.-|-|+|-+|+|||.+.+...+
T Consensus 115 ~~~~~vLl~GppGtGKT~la~aia~ 139 (357)
T 3d8b_A 115 GPPKGILLFGPPGTGKTLIGKCIAS 139 (357)
T ss_dssp SCCSEEEEESSTTSSHHHHHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHHHHHH
Confidence 4466799999999999999876643
No 190
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=54.18 E-value=5.3 Score=34.28 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=23.6
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-+--
T Consensus 27 sl~i~~Ge~~~liG~nGsGKSTLl~~i~G 55 (266)
T 2yz2_A 27 SLVINEGECLLVAGNTGSGKSTLLQIVAG 55 (266)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHHHHhC
Confidence 44566678999999999999999987643
No 191
>1of1_A Thymidine kinase; transferase, antiviral drug, enzyme- prodrug gene, DNA synthesis, ATP-binding; HET: SCT; 1.95A {Herpes simplex virus} SCOP: c.37.1.1
Probab=54.13 E-value=5.3 Score=36.72 Aligned_cols=25 Identities=8% Similarity=-0.178 Sum_probs=20.7
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-..||.+-|.-|+|||++++.....
T Consensus 48 ~~~fIt~EG~dGsGKTT~~~~Lae~ 72 (376)
T 1of1_A 48 TLLRVYIDGPHGMGKTTTTQLLVAL 72 (376)
T ss_dssp EEEEEEECSSTTSSHHHHHHHHHC-
T ss_pred CceEEEEECCCCCCHHHHHHHHHHH
Confidence 3569999999999999999877543
No 192
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=54.12 E-value=5.1 Score=34.98 Aligned_cols=25 Identities=12% Similarity=-0.035 Sum_probs=20.5
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+..|.|+|-+|+|||.+.+...+..
T Consensus 70 ~~~vLl~GppGtGKT~la~~la~~l 94 (368)
T 3uk6_A 70 GRAVLIAGQPGTGKTAIAMGMAQAL 94 (368)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh
Confidence 3678999999999999998765543
No 193
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=54.11 E-value=5.3 Score=35.40 Aligned_cols=25 Identities=12% Similarity=0.042 Sum_probs=20.6
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-...|.+.|.+|+|||+++++.-.
T Consensus 54 ~~~~~i~i~G~~g~GKSTl~~~l~~ 78 (341)
T 2p67_A 54 GNTLRLGVTGTPGAGKSTFLEAFGM 78 (341)
T ss_dssp SCSEEEEEEECTTSCHHHHHHHHHH
T ss_pred CCCEEEEEEcCCCCCHHHHHHHHHH
Confidence 3456788999999999999998743
No 194
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=53.87 E-value=5.3 Score=34.32 Aligned_cols=29 Identities=7% Similarity=-0.062 Sum_probs=23.3
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 40 sl~i~~Ge~~~l~G~NGsGKSTLlk~l~G 68 (267)
T 2zu0_C 40 SLDVHPGEVHAIMGPNGSGKSTLSATLAG 68 (267)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 34556668999999999999999986543
No 195
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=53.85 E-value=42 Score=28.31 Aligned_cols=24 Identities=8% Similarity=0.127 Sum_probs=16.3
Q ss_pred cccHHHHHHHHhC---CCcEEEecCCh
Q 025953 50 YVNAEEAKNLIAV---ERYAVLDVRDN 73 (245)
Q Consensus 50 ~Is~eeL~~ll~~---~~~vLIDVR~~ 73 (245)
..+++++.+.++. +-..|||++..
T Consensus 66 r~~~~~v~~~l~~~~~~i~~VInL~~e 92 (241)
T 2c46_A 66 RFHPSMLSNYLKSLKVKMGLLVDLTNT 92 (241)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEECSSC
T ss_pred cCCHHHHHHHHHHhCCCcceeeeccCC
Confidence 4678888776643 23479999864
No 196
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=53.77 E-value=5 Score=33.58 Aligned_cols=30 Identities=7% Similarity=0.111 Sum_probs=24.0
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 27 vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 56 (229)
T 2pze_A 27 INFKIERGQLLAVAGSTGAGKTSLLMMIMG 56 (229)
T ss_dssp EEEEEETTCEEEEECCTTSSHHHHHHHHTT
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 345556678999999999999999987643
No 197
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=53.62 E-value=54 Score=29.31 Aligned_cols=19 Identities=21% Similarity=0.207 Sum_probs=14.4
Q ss_pred CCCCeEEEEcCCC-hhHHHH
Q 025953 135 SPESKLLVVCQEG-LRYIRF 153 (245)
Q Consensus 135 ~~d~~VVVyC~~G-~RS~~a 153 (245)
.++.+|+|.|..| .||..+
T Consensus 267 ~~~~~VLVHC~aG~gRTGtv 286 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTL 286 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHH
T ss_pred hCCCcEEEECCCCCChHHHH
Confidence 4578999999976 676654
No 198
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=53.49 E-value=5.5 Score=34.09 Aligned_cols=29 Identities=10% Similarity=-0.004 Sum_probs=23.7
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-..-
T Consensus 40 sl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 68 (260)
T 2ghi_A 40 NFFIPSGTTCALVGHTGSGKSTIAKLLYR 68 (260)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHhc
Confidence 45556678999999999999999987643
No 199
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=53.37 E-value=4.1 Score=34.41 Aligned_cols=19 Identities=16% Similarity=-0.052 Sum_probs=16.5
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.+-|.+|||||++++..-
T Consensus 39 I~lvG~~g~GKSSLin~l~ 57 (262)
T 3def_A 39 VLVLGKGGVGKSSTVNSLI 57 (262)
T ss_dssp EEEEECTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 6778999999999998754
No 200
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=53.30 E-value=5.3 Score=36.08 Aligned_cols=27 Identities=4% Similarity=-0.054 Sum_probs=22.3
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
....+.|-+-|-||+|||++|+.+-..
T Consensus 133 ~~~g~~i~ivG~~GsGKTTll~~l~~~ 159 (372)
T 2ewv_A 133 HRKMGLILVTGPTGSGKSTTIASMIDY 159 (372)
T ss_dssp TSSSEEEEEECSSSSSHHHHHHHHHHH
T ss_pred hcCCCEEEEECCCCCCHHHHHHHHHhh
Confidence 455678999999999999999977543
No 201
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=53.23 E-value=5.2 Score=33.99 Aligned_cols=29 Identities=17% Similarity=0.176 Sum_probs=23.4
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 29 sl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 57 (247)
T 2ff7_A 29 NLSIKQGEVIGIVGRSGSGKSTLTKLIQR 57 (247)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 44556678999999999999999987643
No 202
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=53.18 E-value=7.4 Score=32.99 Aligned_cols=25 Identities=16% Similarity=-0.015 Sum_probs=19.9
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
..-|-|+|-+|+|||.+.+..-+..
T Consensus 47 ~~~~ll~G~~GtGKt~la~~la~~~ 71 (311)
T 4fcw_A 47 IGSFLFLGPTGVGKTELAKTLAATL 71 (311)
T ss_dssp SEEEEEESCSSSSHHHHHHHHHHHH
T ss_pred ceEEEEECCCCcCHHHHHHHHHHHH
Confidence 3468899999999999988665543
No 203
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=53.18 E-value=5.2 Score=34.16 Aligned_cols=30 Identities=13% Similarity=0.038 Sum_probs=24.2
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++-|-|-+|+|||++|+-+--
T Consensus 24 isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G 53 (253)
T 2nq2_C 24 LNFDLNKGDILAVLGQNGCGKSTLLDLLLG 53 (253)
T ss_dssp EEEEEETTCEEEEECCSSSSHHHHHHHHTT
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 345566678999999999999999987643
No 204
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=53.17 E-value=5.3 Score=34.47 Aligned_cols=21 Identities=5% Similarity=-0.072 Sum_probs=18.1
Q ss_pred EeecCCcccchhhHhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+-|+|-+|+|||.+++...+.
T Consensus 61 ~ll~G~~G~GKT~la~~la~~ 81 (353)
T 1sxj_D 61 MLFYGPPGTGKTSTILALTKE 81 (353)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 889999999999999876554
No 205
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=53.07 E-value=5.1 Score=37.21 Aligned_cols=23 Identities=9% Similarity=-0.100 Sum_probs=19.7
Q ss_pred eEeecCCcccchhhHhhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
-|.|+|-+|||||.+.+...+.+
T Consensus 52 ~vLL~GppGtGKTtlAr~ia~~~ 74 (447)
T 3pvs_A 52 SMILWGPPGTGKTTLAEVIARYA 74 (447)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHHHHh
Confidence 47899999999999998876654
No 206
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=52.97 E-value=5.2 Score=33.91 Aligned_cols=29 Identities=17% Similarity=0.014 Sum_probs=23.5
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 23 sl~i~~Ge~~~l~G~nGsGKSTLlk~l~G 51 (250)
T 2d2e_A 23 NLVVPKGEVHALMGPNGAGKSTLGKILAG 51 (250)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 34556678999999999999999997654
No 207
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=52.58 E-value=5.7 Score=34.20 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=23.6
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-+--
T Consensus 44 sl~i~~Gei~~liG~NGsGKSTLlk~l~G 72 (263)
T 2olj_A 44 NVHIREGEVVVVIGPSGSGKSTFLRCLNL 72 (263)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHTT
T ss_pred EEEEcCCCEEEEEcCCCCcHHHHHHHHHc
Confidence 44556678999999999999999987643
No 208
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=52.52 E-value=5.8 Score=34.00 Aligned_cols=29 Identities=10% Similarity=0.057 Sum_probs=23.5
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 35 sl~i~~Gei~~l~G~NGsGKSTLlk~l~G 63 (256)
T 1vpl_A 35 SFEIEEGEIFGLIGPNGAGKTTTLRIIST 63 (256)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHTT
T ss_pred EEEEcCCcEEEEECCCCCCHHHHHHHHhc
Confidence 45556678999999999999999987643
No 209
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=52.12 E-value=5.9 Score=33.92 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=23.1
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+..-+++-|-|-+|+|||++|+-.-
T Consensus 26 sl~i~~Ge~~~liG~nGsGKSTLlk~l~ 53 (262)
T 1b0u_A 26 SLQARAGDVISIIGSSGSGKSTFLRCIN 53 (262)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 4556667899999999999999998654
No 210
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=52.12 E-value=6.9 Score=34.02 Aligned_cols=24 Identities=8% Similarity=-0.007 Sum_probs=19.4
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..+.|+|-.|+|||++++...+.
T Consensus 38 ~~~~ll~G~~G~GKT~la~~la~~ 61 (373)
T 1jr3_A 38 HHAYLFSGTRGVGKTSIARLLAKG 61 (373)
T ss_dssp CSEEEEESCTTSSHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHH
Confidence 446889999999999998866443
No 211
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=52.05 E-value=6.1 Score=36.43 Aligned_cols=25 Identities=12% Similarity=0.088 Sum_probs=20.9
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+.-+.|+|-+|+|||.+++...+..
T Consensus 130 ~~~lll~Gp~G~GKTtLa~aia~~l 154 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQSIGNYV 154 (440)
T ss_dssp SCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 5678999999999999998776543
No 212
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=52.05 E-value=7.2 Score=33.93 Aligned_cols=24 Identities=13% Similarity=-0.089 Sum_probs=19.6
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.-|-|+|-+|+|||.+.+...+
T Consensus 50 ~~~~vLl~GppGtGKT~la~aia~ 73 (322)
T 3eie_A 50 PTSGILLYGPPGTGKSYLAKAVAT 73 (322)
T ss_dssp CCCEEEEECSSSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHH
Confidence 355689999999999999876643
No 213
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=51.98 E-value=5.8 Score=34.17 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=24.0
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+. -+.+-|-|-+|+|||++|+-.--
T Consensus 24 vsl~i~-Ge~~~i~G~NGsGKSTLlk~l~G 52 (263)
T 2pjz_A 24 INLEVN-GEKVIILGPNGSGKTTLLRAISG 52 (263)
T ss_dssp EEEEEC-SSEEEEECCTTSSHHHHHHHHTT
T ss_pred eeEEEC-CEEEEEECCCCCCHHHHHHHHhC
Confidence 345677 88999999999999999987643
No 214
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=51.77 E-value=6.1 Score=34.07 Aligned_cols=30 Identities=13% Similarity=-0.053 Sum_probs=24.1
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++-|-|-+|+|||++|+-.--
T Consensus 38 vsl~i~~Ge~~~i~G~nGsGKSTLlk~l~G 67 (271)
T 2ixe_A 38 LTFTLYPGKVTALVGPNGSGKSTVAALLQN 67 (271)
T ss_dssp EEEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eEEEECCCCEEEEECCCCCCHHHHHHHHhc
Confidence 345566678999999999999999987643
No 215
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=51.66 E-value=4.6 Score=34.22 Aligned_cols=19 Identities=11% Similarity=-0.036 Sum_probs=16.3
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.+-|.+|||||++++..-
T Consensus 42 I~vvG~~g~GKSSLin~l~ 60 (270)
T 1h65_A 42 ILVMGKGGVGKSSTVNSII 60 (270)
T ss_dssp EEEEESTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 6678999999999998754
No 216
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=56.94 E-value=3.1 Score=33.06 Aligned_cols=19 Identities=16% Similarity=0.022 Sum_probs=15.8
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.+-|.+|||||++++...
T Consensus 33 i~v~G~~~~GKSsli~~l~ 51 (204)
T 3th5_A 33 CVVVGDGAVGKTCLLISYT 51 (204)
Confidence 5677999999999996654
No 217
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=51.14 E-value=7.9 Score=33.30 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=19.5
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.|..+-++|-+|+|||.+.+..-+.
T Consensus 47 ~~~~~L~~G~~G~GKT~la~~la~~ 71 (324)
T 3u61_B 47 IPHIILHSPSPGTGKTTVAKALCHD 71 (324)
T ss_dssp CCSEEEECSSTTSSHHHHHHHHHHH
T ss_pred CCeEEEeeCcCCCCHHHHHHHHHHH
Confidence 3456778888999999998876443
No 218
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=51.10 E-value=5.8 Score=35.04 Aligned_cols=23 Identities=9% Similarity=-0.054 Sum_probs=18.5
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
+.-|.|+|-+|||||.+.+...+
T Consensus 51 ~~~vll~GppGtGKT~la~~ia~ 73 (363)
T 3hws_A 51 KSNILLIGPTGSGKTLLAETLAR 73 (363)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHH
Confidence 44588999999999999876543
No 219
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=50.67 E-value=5.8 Score=34.44 Aligned_cols=28 Identities=14% Similarity=-0.018 Sum_probs=22.8
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+..-+++-|-|-+|+|||++|+-+-
T Consensus 41 sl~i~~Ge~~~liG~NGsGKSTLlk~l~ 68 (279)
T 2ihy_A 41 SWQIAKGDKWILYGLNGAGKTTLLNILN 68 (279)
T ss_dssp EEEEETTCEEEEECCTTSSHHHHHHHHT
T ss_pred eEEEcCCCEEEEECCCCCcHHHHHHHHh
Confidence 3455566889999999999999998664
No 220
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=50.23 E-value=6.3 Score=32.55 Aligned_cols=19 Identities=11% Similarity=0.106 Sum_probs=15.9
Q ss_pred CceEeecCCcccchhhHhh
Q 025953 212 PDFVDLNPCVTVGEIEFLK 230 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ 230 (245)
.+.+.+.|-||+|||+.+.
T Consensus 76 g~~~~i~g~TGsGKTt~~~ 94 (235)
T 3llm_A 76 NSVVIIRGATGCGKTTQVP 94 (235)
T ss_dssp CSEEEEECCTTSSHHHHHH
T ss_pred CCEEEEEeCCCCCcHHhHH
Confidence 4788999999999997554
No 221
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=50.19 E-value=5.6 Score=35.41 Aligned_cols=24 Identities=13% Similarity=0.084 Sum_probs=19.7
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.-.|.+-|..|||||+++++.-.+
T Consensus 79 ~~~I~i~G~~G~GKSTl~~~L~~~ 102 (355)
T 3p32_A 79 AHRVGITGVPGVGKSTAIEALGMH 102 (355)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHH
Confidence 346888999999999999987543
No 222
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.99 E-value=7.7 Score=36.21 Aligned_cols=28 Identities=21% Similarity=0.063 Sum_probs=23.6
Q ss_pred cccCCceEeecCCcccchhhHhhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+..|.=|-|||-.|+|||.+.+-+-+.
T Consensus 211 g~~~prGvLL~GPPGtGKTllAkAiA~e 238 (437)
T 4b4t_L 211 GIKPPKGVLLYGPPGTGKTLLAKAVAAT 238 (437)
T ss_dssp CCCCCCEEEEESCTTSSHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCCcHHHHHHHHHHH
Confidence 4677899999999999999998876554
No 223
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=49.76 E-value=6 Score=36.58 Aligned_cols=29 Identities=24% Similarity=0.182 Sum_probs=23.4
Q ss_pred ccccCCceEeecCCcccchhhHhhhhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+-++....|-|-|.+|+|||++|+....+
T Consensus 152 lelk~g~~VgLVG~~gAGKSTLL~~Lsg~ 180 (416)
T 1udx_A 152 LELMLIADVGLVGYPNAGKSSLLAAMTRA 180 (416)
T ss_dssp EEECCSCSEEEECCGGGCHHHHHHHHCSS
T ss_pred eEEcCCCEEEEECCCCCcHHHHHHHHHcC
Confidence 44555678999999999999999977554
No 224
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.61 E-value=7.9 Score=36.11 Aligned_cols=28 Identities=11% Similarity=0.146 Sum_probs=23.4
Q ss_pred cccCCceEeecCCcccchhhHhhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+..|.=|-|||-.|+|||.+.+-+-+.
T Consensus 211 g~~~prGvLLyGPPGTGKTllAkAiA~e 238 (434)
T 4b4t_M 211 GIRAPKGALMYGPPGTGKTLLARACAAQ 238 (434)
T ss_dssp CCCCCCEEEEESCTTSSHHHHHHHHHHH
T ss_pred CCCCCCeeEEECcCCCCHHHHHHHHHHH
Confidence 4667889999999999999998876553
No 225
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=48.58 E-value=5.9 Score=34.52 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=21.1
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-++.|-|-|.+|+|||++++....
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~~L~~ 102 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTARVLQA 102 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHH
Confidence 4467899999999999999987654
No 226
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=48.23 E-value=4.5 Score=35.94 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=20.1
Q ss_pred CceEeecCCcccchhhHhhhhhhhhhhhhcc
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHASQMAKGE 242 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (245)
-+.+.|-|-+|||||++||...-......|+
T Consensus 173 G~~~~lvG~sG~GKSTLln~L~g~~~~~~G~ 203 (307)
T 1t9h_A 173 DKTTVFAGQSGVGKSSLLNAISPELGLRTNE 203 (307)
T ss_dssp TSEEEEEESHHHHHHHHHHHHCC--------
T ss_pred CCEEEEECCCCCCHHHHHHHhcccccccccc
Confidence 4688999999999999999875444444443
No 227
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=48.10 E-value=7.1 Score=33.07 Aligned_cols=21 Identities=10% Similarity=-0.070 Sum_probs=17.8
Q ss_pred EeecCCcccchhhHhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+.|+|-.|+|||.+.+...+.
T Consensus 49 ~ll~G~~G~GKT~la~~l~~~ 69 (327)
T 1iqp_A 49 LLFAGPPGVGKTTAALALARE 69 (327)
T ss_dssp EEEESCTTSSHHHHHHHHHHH
T ss_pred EEEECcCCCCHHHHHHHHHHH
Confidence 789999999999998766543
No 228
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=48.05 E-value=5.7 Score=35.66 Aligned_cols=27 Identities=7% Similarity=0.175 Sum_probs=21.6
Q ss_pred cccCCceEeecCCcccchhhHhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+..-+.|.|-|-||+|||++|+-.-.
T Consensus 171 ~i~~G~~i~ivG~sGsGKSTll~~l~~ 197 (361)
T 2gza_A 171 AVQLERVIVVAGETGSGKTTLMKALMQ 197 (361)
T ss_dssp HHHTTCCEEEEESSSSCHHHHHHHHHT
T ss_pred HHhcCCEEEEECCCCCCHHHHHHHHHh
Confidence 344557889999999999999987643
No 229
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=48.03 E-value=6.9 Score=33.96 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=22.8
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+..-+++-|-|-+|+|||++|+-.-
T Consensus 28 sl~i~~Ge~~~iiGpnGsGKSTLl~~l~ 55 (275)
T 3gfo_A 28 NMNIKRGEVTAILGGNGVGKSTLFQNFN 55 (275)
T ss_dssp EEEEETTSEEEEECCTTSSHHHHHHHHT
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHH
Confidence 3455567899999999999999998654
No 230
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=47.87 E-value=9.3 Score=38.18 Aligned_cols=27 Identities=15% Similarity=0.058 Sum_probs=22.7
Q ss_pred ccccCCceEeecCCcccchhhHhhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+-+..++.|-|+|-+|+|||.+++..-
T Consensus 233 l~i~~~~~vLL~Gp~GtGKTtLarala 259 (806)
T 1ypw_A 233 IGVKPPRGILLYGPPGTGKTLIARAVA 259 (806)
T ss_dssp SCCCCCCEEEECSCTTSSHHHHHHHHH
T ss_pred cCCCCCCeEEEECcCCCCHHHHHHHHH
Confidence 356778899999999999999987653
No 231
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=47.83 E-value=5.9 Score=35.75 Aligned_cols=24 Identities=13% Similarity=-0.082 Sum_probs=20.3
Q ss_pred ccCCceEeecCCcccchhhHhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
.....+|-+-|-||+|||++|+-+
T Consensus 120 ~~~~g~i~I~GptGSGKTTlL~~l 143 (356)
T 3jvv_A 120 DVPRGLVLVTGPTGSGKSTTLAAM 143 (356)
T ss_dssp HCSSEEEEEECSTTSCHHHHHHHH
T ss_pred hCCCCEEEEECCCCCCHHHHHHHH
Confidence 345568999999999999999865
No 232
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=47.76 E-value=6.7 Score=35.48 Aligned_cols=21 Identities=10% Similarity=0.088 Sum_probs=17.5
Q ss_pred CceEeecCCcccchhhHhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~ 232 (245)
+..|.|-|.||||||++-...
T Consensus 40 ~~lIvI~GPTgsGKTtLa~~L 60 (339)
T 3a8t_A 40 EKLLVLMGATGTGKSRLSIDL 60 (339)
T ss_dssp CEEEEEECSTTSSHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHH
Confidence 358999999999999986654
No 233
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.46 E-value=9 Score=35.63 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=23.4
Q ss_pred cccCCceEeecCCcccchhhHhhhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
-+..|.=|-|||-.|+|||.+.+-.-+..
T Consensus 202 g~~~prGiLL~GPPGtGKT~lakAiA~~~ 230 (428)
T 4b4t_K 202 GIDPPRGVLLYGPPGTGKTMLVKAVANST 230 (428)
T ss_dssp CCCCCCEEEEESCTTTTHHHHHHHHHHHH
T ss_pred CCCCCceEEEECCCCCCHHHHHHHHHHHh
Confidence 35667789999999999999988765543
No 234
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=47.32 E-value=6.6 Score=33.32 Aligned_cols=24 Identities=8% Similarity=-0.139 Sum_probs=20.3
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-+.+.|.|-+|+|||+++...-.
T Consensus 29 ~G~i~~i~G~~GsGKTtl~~~l~~ 52 (279)
T 1nlf_A 29 AGTVGALVSPGGAGKSMLALQLAA 52 (279)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHH
Confidence 457899999999999999887654
No 235
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=46.92 E-value=6 Score=35.10 Aligned_cols=27 Identities=15% Similarity=0.140 Sum_probs=21.6
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..-+.|-+-|-||+|||++|+-.-..
T Consensus 168 i~~g~~v~i~G~~GsGKTTll~~l~g~ 194 (330)
T 2pt7_A 168 IAIGKNVIVCGGTGSGKTTYIKSIMEF 194 (330)
T ss_dssp HHHTCCEEEEESTTSCHHHHHHHGGGG
T ss_pred ccCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 344578899999999999999976543
No 236
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=46.66 E-value=7.2 Score=35.32 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=23.4
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
-.|-+..-+++.|-|-+|+|||++|+-.-
T Consensus 34 vsl~i~~Ge~~~llGpnGsGKSTLLr~ia 62 (355)
T 1z47_A 34 VSFQIREGEMVGLLGPSGSGKTTILRLIA 62 (355)
T ss_dssp EEEEEETTCEEEEECSTTSSHHHHHHHHH
T ss_pred eEEEECCCCEEEEECCCCCcHHHHHHHHh
Confidence 34455566899999999999999998653
No 237
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=46.50 E-value=8.3 Score=33.42 Aligned_cols=23 Identities=13% Similarity=-0.002 Sum_probs=18.7
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|- +-|+|-.|+|||++++..-+
T Consensus 36 ~~~-~ll~Gp~G~GKTtl~~~la~ 58 (354)
T 1sxj_E 36 LPH-LLLYGPNGTGKKTRCMALLE 58 (354)
T ss_dssp CCC-EEEECSTTSSHHHHHHTHHH
T ss_pred CCe-EEEECCCCCCHHHHHHHHHH
Confidence 344 78999999999999986644
No 238
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=46.41 E-value=6.3 Score=35.80 Aligned_cols=24 Identities=13% Similarity=0.007 Sum_probs=20.0
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+.+.|-|-+|||||++||...-.
T Consensus 215 G~~~~lvG~sG~GKSTLln~L~g~ 238 (358)
T 2rcn_A 215 GRISIFAGQSGVGKSSLLNALLGL 238 (358)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHCC
T ss_pred CCEEEEECCCCccHHHHHHHHhcc
Confidence 357889999999999999877543
No 239
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=46.27 E-value=8.4 Score=35.11 Aligned_cols=27 Identities=4% Similarity=0.005 Sum_probs=22.3
Q ss_pred cccCCceEeecCCcccchhhHhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-+...++|.|.|-.|+|||++++....
T Consensus 165 ~i~~~~~i~l~G~~GsGKSTl~~~l~~ 191 (377)
T 1svm_A 165 NIPKKRYWLFKGPIDSGKTTLAAALLE 191 (377)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCCCHHHHHHHHHh
Confidence 455667999999999999999986653
No 240
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=46.13 E-value=9.5 Score=33.89 Aligned_cols=24 Identities=13% Similarity=-0.089 Sum_probs=19.4
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.-|-|+|-+|+|||.+.+..-+
T Consensus 83 ~~~~iLL~GppGtGKT~la~ala~ 106 (355)
T 2qp9_X 83 PTSGILLYGPPGTGKSYLAKAVAT 106 (355)
T ss_dssp CCCCEEEECSTTSCHHHHHHHHHH
T ss_pred CCceEEEECCCCCcHHHHHHHHHH
Confidence 455689999999999999876544
No 241
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=45.77 E-value=8.1 Score=35.17 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=23.5
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
-.|-+.--+++.|-|-+|+|||++|+-.-
T Consensus 30 vsl~i~~Ge~~~llGpnGsGKSTLLr~ia 58 (372)
T 1v43_A 30 LNLTIKDGEFLVLLGPSGCGKTTTLRMIA 58 (372)
T ss_dssp EEEEECTTCEEEEECCTTSSHHHHHHHHH
T ss_pred eEEEECCCCEEEEECCCCChHHHHHHHHH
Confidence 34455566899999999999999998654
No 242
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=45.75 E-value=12 Score=32.76 Aligned_cols=26 Identities=12% Similarity=-0.005 Sum_probs=21.6
Q ss_pred CceEeecCCcccchhhHhhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
+..|.+-|-.|+|||+++.+.-+...
T Consensus 98 ~~vi~i~G~~G~GKTT~~~~la~~~~ 123 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAGKLAYFYK 123 (297)
T ss_dssp SEEEEEECSSCSSTTHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 67888889999999999988765543
No 243
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=45.73 E-value=9.8 Score=33.79 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=22.1
Q ss_pred cccccccCCceEeecCCcccchhhHhhhhh
Q 025953 204 PCELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
|-++..-+-+.+.|-|.+|+|||++++...
T Consensus 162 ~~~v~~~lg~k~~IvG~nGsGKSTLlk~L~ 191 (365)
T 1lw7_A 162 PKEARPFFAKTVAILGGESSGKSVLVNKLA 191 (365)
T ss_dssp CTTTGGGTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CHHHHHhhhCeEEEECCCCCCHHHHHHHHH
Confidence 333333345678899999999999998654
No 244
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=45.71 E-value=7.5 Score=33.99 Aligned_cols=28 Identities=7% Similarity=0.121 Sum_probs=22.7
Q ss_pred ccccCCceEeecCCcccchhhHhhhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
|-+..-+++-|-|-+|+|||++|+-.-.
T Consensus 59 l~i~~Ge~~~i~G~NGsGKSTLlk~l~G 86 (290)
T 2bbs_A 59 FKIERGQLLAVAGSTGAGKTSLLMMIMG 86 (290)
T ss_dssp EEECTTCEEEEEESTTSSHHHHHHHHTT
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhc
Confidence 4455568999999999999999987644
No 245
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=45.50 E-value=7 Score=33.97 Aligned_cols=23 Identities=13% Similarity=0.159 Sum_probs=19.4
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-+++.|-|-.|+|||++||-.-.
T Consensus 169 geiv~l~G~sG~GKSTll~~l~g 191 (301)
T 1u0l_A 169 GKISTMAGLSGVGKSSLLNAINP 191 (301)
T ss_dssp SSEEEEECSTTSSHHHHHHHHST
T ss_pred CCeEEEECCCCCcHHHHHHHhcc
Confidence 36788999999999999987644
No 246
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=45.37 E-value=10 Score=34.94 Aligned_cols=23 Identities=22% Similarity=0.293 Sum_probs=19.4
Q ss_pred CCceEeecCCcccchhhHhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.-+++.|.|-+|+|||.|+.+.-
T Consensus 202 ~G~liiI~G~pG~GKTtl~l~ia 224 (454)
T 2r6a_A 202 RSDLIIVAARPSVGKTAFALNIA 224 (454)
T ss_dssp TTCEEEEECCTTSCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHH
Confidence 45799999999999999986643
No 247
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=45.18 E-value=8 Score=33.25 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=23.7
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++-|-|-+|+|||++|+-.-.
T Consensus 31 sl~i~~Ge~~~liG~nGsGKSTLl~~l~G 59 (266)
T 4g1u_C 31 SLHIASGEMVAIIGPNGAGKSTLLRLLTG 59 (266)
T ss_dssp EEEEETTCEEEEECCTTSCHHHHHHHHTS
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHHHHhc
Confidence 45566678999999999999999987643
No 248
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=45.14 E-value=9.2 Score=33.88 Aligned_cols=27 Identities=7% Similarity=0.016 Sum_probs=21.9
Q ss_pred cccCCceEeecCCcccchhhHhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-+..-+.|-|-|-+|+|||++++-...
T Consensus 122 ~i~~Ge~vaIvGpsGsGKSTLl~lL~g 148 (305)
T 2v9p_A 122 GIPKKNCLAFIGPPNTGKSMLCNSLIH 148 (305)
T ss_dssp TCTTCSEEEEECSSSSSHHHHHHHHHH
T ss_pred EecCCCEEEEECCCCCcHHHHHHHHhh
Confidence 444557999999999999999987643
No 249
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=45.04 E-value=8.6 Score=34.85 Aligned_cols=30 Identities=20% Similarity=0.096 Sum_probs=23.8
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++.|-|-+|+|||++|+-.--
T Consensus 22 vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 51 (359)
T 2yyz_A 22 VSFEVKDGEFVALLGPSGCGKTTTLLMLAG 51 (359)
T ss_dssp EEEEECTTCEEEEECSTTSSHHHHHHHHHT
T ss_pred eEEEEcCCCEEEEEcCCCchHHHHHHHHHC
Confidence 344555678999999999999999986543
No 250
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A*
Probab=44.89 E-value=6.7 Score=33.60 Aligned_cols=20 Identities=10% Similarity=0.089 Sum_probs=17.0
Q ss_pred eEeecCCcccchhhHhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (245)
-|.+-|.+|||||+++|...
T Consensus 101 ~v~~vG~~~vGKSslin~l~ 120 (262)
T 3cnl_A 101 RVLIVGVPNTGKSTIINKLK 120 (262)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred heEEeCCCCCCHHHHHHHHh
Confidence 46778999999999998764
No 251
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=44.85 E-value=8 Score=35.16 Aligned_cols=30 Identities=20% Similarity=0.107 Sum_probs=23.9
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++.|-|-+|+|||++|+-.--
T Consensus 22 vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 51 (372)
T 1g29_1 22 MSLEVKDGEFMILLGPSGCGKTTTLRMIAG 51 (372)
T ss_dssp EEEEEETTCEEEEECSTTSSHHHHHHHHHT
T ss_pred eEEEEcCCCEEEEECCCCcHHHHHHHHHHc
Confidence 344556678999999999999999987643
No 252
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=44.54 E-value=8.7 Score=34.83 Aligned_cols=30 Identities=20% Similarity=0.163 Sum_probs=23.9
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-+..-+++.|-|-+|+|||++|+-.--
T Consensus 22 vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 51 (362)
T 2it1_A 22 INLKIKDGEFMALLGPSGSGKSTLLYTIAG 51 (362)
T ss_dssp EEEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred eEEEECCCCEEEEECCCCchHHHHHHHHhc
Confidence 344555678999999999999999986543
No 253
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=44.06 E-value=8.9 Score=34.30 Aligned_cols=22 Identities=14% Similarity=-0.112 Sum_probs=18.7
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+.-|-|+|-+|||||.+.+..-
T Consensus 148 ~~~vLL~GppGtGKT~la~aia 169 (389)
T 3vfd_A 148 ARGLLLFGPPGNGKTMLAKAVA 169 (389)
T ss_dssp CSEEEEESSTTSCHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHH
Confidence 4568999999999999987663
No 254
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=43.91 E-value=10 Score=35.62 Aligned_cols=25 Identities=12% Similarity=0.103 Sum_probs=20.2
Q ss_pred ccCCceEeecCCcccchhhHhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.++|.=|-|+|-+|+|||.+.+..-
T Consensus 46 ~~~p~gvLL~GppGtGKT~Laraia 70 (476)
T 2ce7_A 46 ARMPKGILLVGPPGTGKTLLARAVA 70 (476)
T ss_dssp CCCCSEEEEECCTTSSHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHH
Confidence 3456668999999999999987654
No 255
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=43.84 E-value=7.7 Score=34.96 Aligned_cols=28 Identities=7% Similarity=0.114 Sum_probs=22.9
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+.--+++.|-|-+|+|||++|+-.-
T Consensus 25 sl~i~~Ge~~~llGpnGsGKSTLLr~ia 52 (353)
T 1oxx_K 25 NINIENGERFGILGPSGAGKTTFMRIIA 52 (353)
T ss_dssp EEEECTTCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEECCCCCcHHHHHHHHh
Confidence 3455566899999999999999998654
No 256
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=43.39 E-value=29 Score=26.93 Aligned_cols=27 Identities=26% Similarity=0.380 Sum_probs=17.1
Q ss_pred CCCeEEEEcCCC-hhHHHH-HHHHH-HcCC
Q 025953 136 PESKLLVVCQEG-LRYIRF-CRFHR-AARC 162 (245)
Q Consensus 136 ~d~~VVVyC~~G-~RS~~a-a~~L~-~~G~ 162 (245)
++.+|+|.|..| .||..+ +..|. ..|+
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~ 141 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGI 141 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCC
Confidence 568999999966 576643 33333 3554
No 257
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=43.27 E-value=8.8 Score=34.39 Aligned_cols=18 Identities=6% Similarity=0.084 Sum_probs=15.9
Q ss_pred EeecCCcccchhhHhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~ 232 (245)
|.+-|.+|||||++++..
T Consensus 40 I~vvG~~g~GKSTLln~L 57 (361)
T 2qag_A 40 LMVVGESGLGKSTLINSL 57 (361)
T ss_dssp EEECCCTTSCHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHH
Confidence 477899999999999984
No 258
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=43.12 E-value=9.6 Score=32.34 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=19.4
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+.||.+-|..|+|||+.++...
T Consensus 27 ~~~i~~eG~~GsGKsT~~~~l~ 48 (236)
T 3lv8_A 27 AKFIVIEGLEGAGKSTAIQVVV 48 (236)
T ss_dssp CCEEEEEESTTSCHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHH
Confidence 6799999999999999987754
No 259
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=43.10 E-value=9.6 Score=33.97 Aligned_cols=25 Identities=16% Similarity=0.276 Sum_probs=20.3
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-|-+|-|-|.+|+|||++++..+..
T Consensus 91 ~p~iigI~GpsGSGKSTl~~~L~~l 115 (321)
T 3tqc_A 91 VPYIIGIAGSVAVGKSTTSRVLKAL 115 (321)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Confidence 3457899999999999999876543
No 260
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=43.09 E-value=11 Score=31.81 Aligned_cols=20 Identities=10% Similarity=0.142 Sum_probs=17.2
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
+.|+|-.|+|||++.+...+
T Consensus 45 ~ll~G~~G~GKt~la~~l~~ 64 (323)
T 1sxj_B 45 MIISGMPGIGKTTSVHCLAH 64 (323)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECcCCCCHHHHHHHHHH
Confidence 88999999999999876544
No 261
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=42.97 E-value=9.7 Score=32.08 Aligned_cols=21 Identities=5% Similarity=-0.107 Sum_probs=17.5
Q ss_pred EeecCCcccchhhHhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+.|+|-.|+|||++.+...+.
T Consensus 41 ~ll~G~~G~GKt~la~~l~~~ 61 (319)
T 2chq_A 41 LLFSGPPGTGKTATAIALARD 61 (319)
T ss_dssp EEEESSSSSSHHHHHHHHHHH
T ss_pred EEEECcCCcCHHHHHHHHHHH
Confidence 789999999999998766443
No 262
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=42.93 E-value=11 Score=35.26 Aligned_cols=25 Identities=8% Similarity=-0.076 Sum_probs=20.4
Q ss_pred CCceEeecCCcccchhhHhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.+.-+.|+|-+|+|||.+.+...+.
T Consensus 76 ~~~~lLL~GppGtGKTtla~~la~~ 100 (516)
T 1sxj_A 76 VFRAAMLYGPPGIGKTTAAHLVAQE 100 (516)
T ss_dssp SCSEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHH
Confidence 4568999999999999998766443
No 263
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=42.60 E-value=9.3 Score=36.79 Aligned_cols=22 Identities=5% Similarity=-0.041 Sum_probs=18.5
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
..++.+.|.+|+|||.++...-
T Consensus 164 ~~~~vi~G~pGTGKTt~l~~ll 185 (608)
T 1w36_D 164 RRISVISGGPGTGKTTTVAKLL 185 (608)
T ss_dssp BSEEEEECCTTSTHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHH
Confidence 5789999999999998876543
No 264
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=42.44 E-value=9.1 Score=35.34 Aligned_cols=23 Identities=9% Similarity=-0.088 Sum_probs=19.8
Q ss_pred CCceEeecCCcccchhhHhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.-+.|-+-|-||+|||++|+-+-
T Consensus 166 ~ggii~I~GpnGSGKTTlL~all 188 (418)
T 1p9r_A 166 PHGIILVTGPTGSGKSTTLYAGL 188 (418)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHH
T ss_pred cCCeEEEECCCCCCHHHHHHHHH
Confidence 44689999999999999999764
No 265
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=42.36 E-value=11 Score=33.18 Aligned_cols=19 Identities=11% Similarity=0.093 Sum_probs=16.6
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.+-|..|||||++++...
T Consensus 168 I~ivG~~~vGKSsLl~~l~ 186 (329)
T 3o47_A 168 ILMVGLDAAGKTTILYKLK 186 (329)
T ss_dssp EEEEESTTSSHHHHHHHTC
T ss_pred EEEECCCCccHHHHHHHHh
Confidence 7788999999999998754
No 266
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=42.23 E-value=12 Score=32.08 Aligned_cols=24 Identities=8% Similarity=-0.024 Sum_probs=19.8
Q ss_pred cCCceEeecCCcccchhhHhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.-+.+|.|-|..|+|||++.+...
T Consensus 73 ~~~~iI~I~G~~GSGKSTva~~La 96 (281)
T 2f6r_A 73 SGLYVLGLTGISGSGKSSVAQRLK 96 (281)
T ss_dssp TTCEEEEEEECTTSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHH
Confidence 345689999999999999987654
No 267
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=42.07 E-value=11 Score=35.86 Aligned_cols=25 Identities=16% Similarity=0.101 Sum_probs=20.8
Q ss_pred CceEeecCCcccchhhHhhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
...+-|.|-+|||||++++-.....
T Consensus 108 g~~vll~Gp~GtGKTtlar~ia~~l 132 (543)
T 3m6a_A 108 GPILCLAGPPGVGKTSLAKSIAKSL 132 (543)
T ss_dssp SCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhc
Confidence 5578999999999999998765544
No 268
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=42.06 E-value=9.9 Score=31.94 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=20.6
Q ss_pred cCCceEeecCCcccchhhHhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.....|.|-|-.|+|||++++...
T Consensus 25 ~~g~~I~I~G~~GsGKSTl~k~La 48 (252)
T 4e22_A 25 AIAPVITVDGPSGAGKGTLCKALA 48 (252)
T ss_dssp TTSCEEEEECCTTSSHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHH
Confidence 345689999999999999998775
No 269
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=41.91 E-value=9.7 Score=33.64 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=23.6
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-++|-|-|-+|+|||++|+-..-
T Consensus 74 sl~i~~Ge~vaivG~sGsGKSTLl~ll~g 102 (306)
T 3nh6_A 74 SFTVMPGQTLALVGPSGAGKSTILRLLFR 102 (306)
T ss_dssp EEEECTTCEEEEESSSCHHHHHHHHHHTT
T ss_pred eEEEcCCCEEEEECCCCchHHHHHHHHHc
Confidence 44566678999999999999999986543
No 270
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.78 E-value=12 Score=35.39 Aligned_cols=27 Identities=11% Similarity=0.005 Sum_probs=22.8
Q ss_pred cccCCceEeecCCcccchhhHhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-+..|.=|-|||-.|+|||.+.+-.-+
T Consensus 239 Gi~pprGILLyGPPGTGKTlLAkAiA~ 265 (467)
T 4b4t_H 239 GIDPPKGILLYGPPGTGKTLCARAVAN 265 (467)
T ss_dssp TCCCCSEEEECSCTTSSHHHHHHHHHH
T ss_pred CCCCCCceEeeCCCCCcHHHHHHHHHh
Confidence 467889999999999999998876544
No 271
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=41.77 E-value=18 Score=27.12 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=19.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHc
Q 025953 137 ESKLLVVCQEGLRYIRFCRFHRAA 160 (245)
Q Consensus 137 d~~VVVyC~~G~RS~~aa~~L~~~ 160 (245)
..+|++.|.+|+.|..++..+++.
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~~~ 29 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAINEG 29 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHH
Confidence 567999999999888888777653
No 272
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.63 E-value=12 Score=34.71 Aligned_cols=28 Identities=18% Similarity=0.089 Sum_probs=23.2
Q ss_pred cccCCceEeecCCcccchhhHhhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+..|.=|-|||-.|+|||.+.+-.-+.
T Consensus 178 gi~~prGvLL~GPPGTGKTllAkAiA~e 205 (405)
T 4b4t_J 178 GIAQPKGVILYGPPGTGKTLLARAVAHH 205 (405)
T ss_dssp TCCCCCCEEEESCSSSSHHHHHHHHHHH
T ss_pred CCCCCCceEEeCCCCCCHHHHHHHHHHh
Confidence 4667888999999999999998776544
No 273
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=41.38 E-value=12 Score=34.42 Aligned_cols=26 Identities=12% Similarity=-0.178 Sum_probs=20.7
Q ss_pred cCCceEeecCCcccchhhHhhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..+.-|-|+|-+|+|||.+.+..-+.
T Consensus 165 ~~~~~vLL~GppGtGKT~lA~aia~~ 190 (444)
T 2zan_A 165 TPWRGILLFGPPGTGKSYLAKAVATE 190 (444)
T ss_dssp CCCSEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHH
Confidence 34577999999999999998765443
No 274
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=41.27 E-value=15 Score=34.75 Aligned_cols=27 Identities=22% Similarity=0.182 Sum_probs=21.5
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+++|.=|-|+|-+|+|||.+++-.-+.
T Consensus 61 ~~ip~GvLL~GppGtGKTtLaraIa~~ 87 (499)
T 2dhr_A 61 ARIPKGVLLVGPPGVGKTHLARAVAGE 87 (499)
T ss_dssp CCCCSEEEEECSSSSSHHHHHHHHHHH
T ss_pred CCCCceEEEECCCCCCHHHHHHHHHHH
Confidence 455666999999999999999866543
No 275
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=41.12 E-value=11 Score=33.05 Aligned_cols=22 Identities=18% Similarity=0.252 Sum_probs=18.6
Q ss_pred CCceEeecCCcccchhhHhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
.-+++.|-|-+|+|||.|..+.
T Consensus 67 ~G~l~li~G~pG~GKTtl~l~i 88 (315)
T 3bh0_A 67 RRNFVLIAARPSMGKTAFALKQ 88 (315)
T ss_dssp TTCEEEEECCTTSSHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHH
Confidence 3478999999999999997654
No 276
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=40.90 E-value=8.4 Score=33.34 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=17.0
Q ss_pred eEeecCCcccchhhHhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (245)
-|.+-|++||||++++|...
T Consensus 122 ~v~~vG~~nvGKSsliN~l~ 141 (282)
T 1puj_A 122 RALIIGIPNVGKSTLINRLA 141 (282)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred eEEEEecCCCchHHHHHHHh
Confidence 46777999999999999764
No 277
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=40.85 E-value=12 Score=32.51 Aligned_cols=21 Identities=5% Similarity=-0.066 Sum_probs=17.8
Q ss_pred EeecCCcccchhhHhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+-++|-.|+|||++++..-+.
T Consensus 49 ~ll~Gp~G~GKTtla~~la~~ 69 (340)
T 1sxj_C 49 LLFYGPPGTGKTSTIVALARE 69 (340)
T ss_dssp EEEECSSSSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 778999999999999876544
No 278
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=40.58 E-value=8.6 Score=32.69 Aligned_cols=20 Identities=15% Similarity=-0.034 Sum_probs=16.4
Q ss_pred eEeecCCcccchhhHhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (245)
-|.+-|.+|||||++++..-
T Consensus 157 ~i~i~G~~~~GKssli~~~~ 176 (332)
T 2wkq_A 157 KCVVVGDGAVGKTCLLISYT 176 (332)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCCChHHHHHHHH
Confidence 36788999999999996543
No 279
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=40.55 E-value=15 Score=34.21 Aligned_cols=26 Identities=12% Similarity=-0.012 Sum_probs=21.8
Q ss_pred CCceEeecCCcccchhhHhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
.|..|.+-|-+|||||+++.+.-+.-
T Consensus 96 ~~~vI~lvG~~GsGKTTt~~kLA~~l 121 (433)
T 3kl4_A 96 LPFIIMLVGVQGSGKTTTAGKLAYFY 121 (433)
T ss_dssp SSEEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 47788999999999999998876544
No 280
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=40.08 E-value=11 Score=34.86 Aligned_cols=22 Identities=14% Similarity=-0.040 Sum_probs=18.3
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+.|+|-+|||||.+.+..-+.
T Consensus 203 ~~LL~G~pG~GKT~la~~la~~ 224 (468)
T 3pxg_A 203 NPVLIGEPGVGKTAIAEGLAQQ 224 (468)
T ss_dssp EEEEESCTTTTTHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHHH
Confidence 4689999999999999876544
No 281
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=39.98 E-value=11 Score=31.39 Aligned_cols=22 Identities=9% Similarity=-0.278 Sum_probs=18.7
Q ss_pred CCceEeecCCcccchhhHhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
-|-.|.|.|..|+|||++.+..
T Consensus 28 ~~~~I~l~G~~GsGKsT~a~~L 49 (243)
T 3tlx_A 28 PDGRYIFLGAPGSGKGTQSLNL 49 (243)
T ss_dssp CCEEEEEECCTTSSHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHH
Confidence 3568999999999999987765
No 282
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=39.91 E-value=14 Score=34.90 Aligned_cols=34 Identities=9% Similarity=-0.100 Sum_probs=25.0
Q ss_pred ccccCCceEeecCCcccchhhHhhhhhhhhhhhhc
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQHASQMAKG 241 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (245)
|-+.. +++-|-|-+|+|||++|+-..-.-.-..|
T Consensus 25 l~i~~-e~~~liG~nGsGKSTLl~~l~Gl~~p~~G 58 (483)
T 3euj_A 25 FDFDE-LVTTLSGGNGAGKSTTMAGFVTALIPDLT 58 (483)
T ss_dssp EECCS-SEEEEECCTTSSHHHHHHHHHHHHCCCTT
T ss_pred EEEcc-ceEEEECCCCCcHHHHHHHHhcCCCCCCC
Confidence 44445 79999999999999999876654433333
No 283
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.82 E-value=13 Score=34.89 Aligned_cols=29 Identities=21% Similarity=0.150 Sum_probs=23.9
Q ss_pred ccccCCceEeecCCcccchhhHhhhhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+-+..|.=|-|||-.|+|||.+.+-.-+.
T Consensus 211 ~Gi~~prGvLLyGPPGTGKTlLAkAiA~e 239 (437)
T 4b4t_I 211 MGIKPPKGVILYGAPGTGKTLLAKAVANQ 239 (437)
T ss_dssp HTCCCCSEEEEESSTTTTHHHHHHHHHHH
T ss_pred CCCCCCCCCceECCCCchHHHHHHHHHHH
Confidence 34677889999999999999998776544
No 284
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=39.73 E-value=11 Score=34.73 Aligned_cols=20 Identities=20% Similarity=0.134 Sum_probs=17.5
Q ss_pred eEeecCCcccchhhHhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (245)
.+.+.|..|+|||.+++..-
T Consensus 47 ~~li~G~aGTGKT~ll~~~~ 66 (459)
T 3upu_A 47 HVTINGPAGTGATTLTKFII 66 (459)
T ss_dssp EEEEECCTTSCHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHH
Confidence 88999999999999987543
No 285
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=39.61 E-value=29 Score=26.15 Aligned_cols=28 Identities=4% Similarity=-0.024 Sum_probs=18.3
Q ss_pred cCCCcccHHHHHHHHhCCC-cEEEecCCh
Q 025953 46 ADVNYVNAEEAKNLIAVER-YAVLDVRDN 73 (245)
Q Consensus 46 ~~~~~Is~eeL~~ll~~~~-~vLIDVR~~ 73 (245)
......|.+++.+++.+.+ ..||++++.
T Consensus 22 ~~p~~~t~~df~~~l~~~gi~~Iv~l~~~ 50 (159)
T 1rxd_A 22 HNPTNATLNKFIEELKKYGVTTIVRVCEA 50 (159)
T ss_dssp CCCCGGGHHHHHHHHHHTTEEEEEECSCC
T ss_pred CCCccccHHHHHHHHHHcCCCEEEEcCCC
Confidence 3344578888767665444 468899864
No 286
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=39.56 E-value=10 Score=34.39 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=22.9
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+..-+++.|-|-+|+|||++|+-.-
T Consensus 24 sl~i~~Ge~~~llGpsGsGKSTLLr~ia 51 (359)
T 3fvq_A 24 SLSLDPGEILFIIGASGCGKTTLLRCLA 51 (359)
T ss_dssp EEEECTTCEEEEEESTTSSHHHHHHHHH
T ss_pred EEEEcCCCEEEEECCCCchHHHHHHHHh
Confidence 4455566899999999999999998654
No 287
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=39.44 E-value=16 Score=31.80 Aligned_cols=27 Identities=7% Similarity=-0.177 Sum_probs=21.2
Q ss_pred CCceEeecCCcccchhhHhhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
.++.+.+-|-.|+|||+++.+.-..-.
T Consensus 97 ~~~~i~i~g~~G~GKTT~~~~la~~~~ 123 (295)
T 1ls1_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYK 123 (295)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 456777779999999999988765543
No 288
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=39.12 E-value=12 Score=36.83 Aligned_cols=23 Identities=13% Similarity=0.033 Sum_probs=19.4
Q ss_pred eEeecCCcccchhhHhhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
-|-|+|-+|||||++.+..-+.+
T Consensus 523 ~~Ll~Gp~GtGKT~lA~ala~~l 545 (758)
T 3pxi_A 523 SFIFLGPTGVGKTELARALAESI 545 (758)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 58899999999999988766554
No 289
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=38.73 E-value=12 Score=35.35 Aligned_cols=23 Identities=13% Similarity=-0.113 Sum_probs=19.4
Q ss_pred eEeecCCcccchhhHhhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
=|-|+|-+|||||.+.+...+.+
T Consensus 43 ~VLL~GpPGtGKT~LAraLa~~l 65 (500)
T 3nbx_X 43 SVFLLGPPGIAKSLIARRLKFAF 65 (500)
T ss_dssp EEEEECCSSSSHHHHHHHGGGGB
T ss_pred eeEeecCchHHHHHHHHHHHHHH
Confidence 47899999999999988776654
No 290
>3gee_A MNME, tRNA modification GTPase MNME; G protein, cytoplasm, GTP- binding, hydrolase, magnesium, metal-binding, nucleotide- binding, potassium; HET: GDP FON; 2.95A {Chlorobium tepidum} PDB: 3gei_A*
Probab=38.55 E-value=11 Score=35.44 Aligned_cols=20 Identities=10% Similarity=0.047 Sum_probs=17.3
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.|-|.+|||||+++|..-.
T Consensus 236 V~ivG~~nvGKSSLln~L~~ 255 (476)
T 3gee_A 236 TVIAGKPNAGKSTLLNTLLG 255 (476)
T ss_dssp EEEECCTTSSHHHHHHHCC-
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 88999999999999997654
No 291
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=38.41 E-value=71 Score=27.68 Aligned_cols=27 Identities=11% Similarity=-0.002 Sum_probs=17.0
Q ss_pred CCCeEEEEcCCCh-hHHH-H-HHHHHHcCC
Q 025953 136 PESKLLVVCQEGL-RYIR-F-CRFHRAARC 162 (245)
Q Consensus 136 ~d~~VVVyC~~G~-RS~~-a-a~~L~~~G~ 162 (245)
.+.+|+|+|..|. ||.. + +.++...|.
T Consensus 105 ~g~~VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp HCSEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCCCchhHHHHHHHHHHHhCC
Confidence 3578999999774 6554 3 444444453
No 292
>3geh_A MNME, tRNA modification GTPase MNME; G protein, U34, GTP-binding, HYDR magnesium, metal-binding, nucleotide-binding, potassium, TR processing; HET: GDP FON; 3.20A {Nostoc SP}
Probab=38.37 E-value=9.5 Score=35.64 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=17.5
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.|-|.+|||||+++|..-.
T Consensus 227 V~ivG~~nvGKSSLln~L~~ 246 (462)
T 3geh_A 227 VAIVGRPNVGKSSLLNAWSQ 246 (462)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHhC
Confidence 88999999999999997643
No 293
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=38.09 E-value=13 Score=34.11 Aligned_cols=29 Identities=17% Similarity=0.163 Sum_probs=23.6
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-+..-+++.|-|-+|+|||++|+-.--
T Consensus 23 sl~i~~Ge~~~llGpsGsGKSTLLr~iaG 51 (381)
T 3rlf_A 23 NLDIHEGEFVVFVGPSGCGKSTLLRMIAG 51 (381)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCEEEEEcCCCchHHHHHHHHHc
Confidence 44555668999999999999999987643
No 294
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=37.96 E-value=28 Score=28.09 Aligned_cols=29 Identities=17% Similarity=0.172 Sum_probs=19.0
Q ss_pred CCCCCeEEEEcCCC-hhHHH--HHHHHHHcCC
Q 025953 134 FSPESKLLVVCQEG-LRYIR--FCRFHRAARC 162 (245)
Q Consensus 134 l~~d~~VVVyC~~G-~RS~~--aa~~L~~~G~ 162 (245)
+.++.+|+|+|..| .||.. ++.++...|.
T Consensus 114 ~~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 114 TTKREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp HHTTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred HhcCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 44578999999966 56664 3455555543
No 295
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=37.91 E-value=14 Score=33.83 Aligned_cols=22 Identities=9% Similarity=0.057 Sum_probs=18.6
Q ss_pred CCceEeecCCcccchhhHhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
.-+++.|.|-+|+|||.|..+.
T Consensus 199 ~G~l~ii~G~pg~GKT~lal~i 220 (444)
T 2q6t_A 199 PGSLNIIAARPAMGKTAFALTI 220 (444)
T ss_dssp TTCEEEEEECTTSCHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHH
Confidence 3579999999999999997554
No 296
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=37.75 E-value=12 Score=34.58 Aligned_cols=26 Identities=8% Similarity=-0.079 Sum_probs=21.1
Q ss_pred CCceEeecCCcccchhhHhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
.|..|.+-|-+|||||++..+.-+..
T Consensus 98 ~~~vI~ivG~~GvGKTTla~~La~~l 123 (432)
T 2v3c_C 98 KQNVILLVGIQGSGKTTTAAKLARYI 123 (432)
T ss_dssp SCCCEEEECCSSSSTTHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 35678888999999999998876543
No 297
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=37.52 E-value=60 Score=29.03 Aligned_cols=89 Identities=12% Similarity=0.209 Sum_probs=48.5
Q ss_pred ccHHHHHHHHh---CCCcEEEecCChhHHhhcCCCC-eEeeCCccccCCCcchhhhhhhcccccCccccCCCCCCCChHH
Q 025953 51 VNAEEAKNLIA---VERYAVLDVRDNSQYNRAHIKS-SYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKQNPEF 126 (245)
Q Consensus 51 Is~eeL~~ll~---~~~~vLIDVR~~~Ey~~GHIPG-AinIPl~~l~~~~~~~~l~k~~~~~~~~~l~~g~~~~~~~~~f 126 (245)
-..+++...++ .+.+.+++++++..|+.....+ -.++|+.+.... ....+ .+|
T Consensus 50 n~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~~~P-~~~~l----------------------~~~ 106 (339)
T 3v0d_A 50 NPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVP-TLVDL----------------------LKF 106 (339)
T ss_dssp EEHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECTTSCC-CHHHH----------------------HHH
T ss_pred CCHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCCCCCC-CHHHH----------------------HHH
Confidence 46677777775 3467899998766666444333 235565432210 11110 234
Q ss_pred HHHhhhcC--CCCCeEEEEcCCC-hhHH-HHHHHHHHcCC
Q 025953 127 VQSVKSQF--SPESKLLVVCQEG-LRYI-RFCRFHRAARC 162 (245)
Q Consensus 127 ~~~l~~~l--~~d~~VVVyC~~G-~RS~-~aa~~L~~~G~ 162 (245)
++.+...+ +++..|+|.|.+| .|+. .++-.|...|.
T Consensus 107 ~~~v~~~l~~~~~~~v~vHC~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 107 IDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp HHHHHHHHHTCTTCEEEEECSSSSHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCCCeEEEEeCCCCcchHHHHHHHHHHhcC
Confidence 44444433 3457899999954 4554 34455555554
No 298
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=37.17 E-value=12 Score=31.86 Aligned_cols=22 Identities=14% Similarity=-0.073 Sum_probs=18.8
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.+.|.|-|..|+|||++.+...
T Consensus 48 g~~i~l~G~~GsGKSTl~~~La 69 (250)
T 3nwj_A 48 GRSMYLVGMMGSGKTTVGKIMA 69 (250)
T ss_dssp TCCEEEECSTTSCHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHH
Confidence 4579999999999999987654
No 299
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=36.95 E-value=12 Score=34.27 Aligned_cols=29 Identities=14% Similarity=0.053 Sum_probs=23.7
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
-.|-+.--+++.|-|-+|+|||++|+-.-
T Consensus 40 vsl~i~~Ge~~~llGpsGsGKSTLLr~ia 68 (390)
T 3gd7_A 40 ISFSISPGQRVGLLGRTGSGKSTLLSAFL 68 (390)
T ss_dssp EEEEECTTCEEEEEESTTSSHHHHHHHHH
T ss_pred eeEEEcCCCEEEEECCCCChHHHHHHHHh
Confidence 34556667899999999999999998654
No 300
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=36.61 E-value=9.5 Score=34.07 Aligned_cols=25 Identities=16% Similarity=0.099 Sum_probs=19.9
Q ss_pred ccccCCceEeecCCcccchhhHhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
+-+..- ++.|-|-+|+|||++|+-.
T Consensus 56 l~~~~G-~~~lvG~NGaGKStLl~aI 80 (415)
T 4aby_A 56 LELGGG-FCAFTGETGAGKSIIVDAL 80 (415)
T ss_dssp EECCSS-EEEEEESHHHHHHHHTHHH
T ss_pred EecCCC-cEEEECCCCCCHHHHHHHH
Confidence 334444 9999999999999999765
No 301
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=36.59 E-value=12 Score=33.61 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=18.2
Q ss_pred CceEeecCCcccchhhHhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~ 232 (245)
-+++.|-|-+|+|||.|..+.
T Consensus 46 G~LiiIaG~pG~GKTt~al~i 66 (338)
T 4a1f_A 46 GSLVIIGARPSMGKTSLMMNM 66 (338)
T ss_dssp TCEEEEEECTTSCHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHH
Confidence 479999999999999997654
No 302
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=36.50 E-value=8.8 Score=36.39 Aligned_cols=25 Identities=8% Similarity=-0.157 Sum_probs=20.1
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-.+.|-+-|-||+|||++|+-+-.
T Consensus 258 ~~g~~i~I~GptGSGKTTlL~aL~~ 282 (511)
T 2oap_1 258 EHKFSAIVVGETASGKTTTLNAIMM 282 (511)
T ss_dssp HTTCCEEEEESTTSSHHHHHHHHGG
T ss_pred hCCCEEEEECCCCCCHHHHHHHHHh
Confidence 3456688899999999999987643
No 303
>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, SIGN protein; 2.90A {Chlorobaculum tepidum}
Probab=35.39 E-value=13 Score=34.84 Aligned_cols=22 Identities=23% Similarity=0.160 Sum_probs=17.3
Q ss_pred EeecCCcccchhhHhhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
|.|-|.+|||||++++....+.
T Consensus 44 V~lvG~~~vGKSSLl~~l~~~~ 65 (535)
T 3dpu_A 44 VHLIGDGMAGKTSLLKQLIGET 65 (535)
T ss_dssp EEEESSSCSSHHHHHHHHHC--
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 5678999999999999876543
No 304
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=35.09 E-value=15 Score=35.11 Aligned_cols=24 Identities=17% Similarity=0.050 Sum_probs=20.2
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..++.+.|..|+|||.+++..-..
T Consensus 204 ~~~~~I~G~pGTGKTt~i~~l~~~ 227 (574)
T 3e1s_A 204 HRLVVLTGGPGTGKSTTTKAVADL 227 (574)
T ss_dssp CSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHH
Confidence 578999999999999998776543
No 305
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=34.87 E-value=15 Score=30.91 Aligned_cols=28 Identities=21% Similarity=-0.133 Sum_probs=21.0
Q ss_pred ccccccCCceEeecCCcccchhhHhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
.-++-.-...|.|-|.||+|||++...+
T Consensus 27 a~~v~~~g~~ilI~GpsGsGKStLA~~L 54 (205)
T 2qmh_A 27 GVLVDIYGLGVLITGDSGVGKSETALEL 54 (205)
T ss_dssp SEEEEETTEEEEEECCCTTTTHHHHHHH
T ss_pred EEEEEECCEEEEEECCCCCCHHHHHHHH
Confidence 3344445677999999999999986654
No 306
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=34.83 E-value=22 Score=33.62 Aligned_cols=24 Identities=13% Similarity=0.101 Sum_probs=19.6
Q ss_pred cCCceEeecCCcccchhhHhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.-+..|.|-|..|+|||++-+...
T Consensus 33 ~~~~lIvlvGlpGSGKSTia~~La 56 (520)
T 2axn_A 33 NSPTVIVMVGLPARGKTYISKKLT 56 (520)
T ss_dssp CCCEEEEEECCTTSSHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHH
Confidence 446689999999999999876653
No 307
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=33.76 E-value=18 Score=33.87 Aligned_cols=26 Identities=15% Similarity=0.082 Sum_probs=20.8
Q ss_pred ccCCceEeecCCcccchhhHhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
...+.-|-|+|-+|+|||.+.+...+
T Consensus 235 ~~~~~~vLL~GppGtGKT~lAraia~ 260 (489)
T 3hu3_A 235 VKPPRGILLYGPPGTGKTLIARAVAN 260 (489)
T ss_dssp CCCCCEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCCCcEEEECcCCCCHHHHHHHHHH
Confidence 34556699999999999999877643
No 308
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=33.63 E-value=14 Score=34.20 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=19.5
Q ss_pred ceEeecCCcccchhhHhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+|-|-|-+|+|||++||..-..
T Consensus 70 ~~valvG~nGaGKSTLln~L~Gl 92 (413)
T 1tq4_A 70 LNVAVTGETGSGKSSFINTLRGI 92 (413)
T ss_dssp EEEEEEECTTSSHHHHHHHHHTC
T ss_pred eEEEEECCCCCcHHHHHHHHhCC
Confidence 38889999999999999977543
No 309
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=33.59 E-value=19 Score=33.68 Aligned_cols=26 Identities=8% Similarity=-0.003 Sum_probs=21.5
Q ss_pred CCceEeecCCcccchhhHhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
.|..|.+-|-+|||||+++.+.-++.
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA~~l 124 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLARYF 124 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCCHHHHHHHHHHHH
Confidence 36788899999999999998876543
No 310
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=33.51 E-value=16 Score=33.94 Aligned_cols=26 Identities=4% Similarity=-0.110 Sum_probs=20.1
Q ss_pred cccCCce--EeecCCcccchhhHhhhhh
Q 025953 208 VLKIPDF--VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 208 ~~~~~~~--~~~~~~~~~~~~~~~~~~~ 233 (245)
-+.--+. |-|-|-+|+|||++||..-
T Consensus 36 ~i~~Gei~~vaLvG~nGaGKSTLln~L~ 63 (427)
T 2qag_B 36 SVSQGFCFNILCVGETGLGKSTLMDTLF 63 (427)
T ss_dssp SCC-CCEEEEEEECSTTSSSHHHHHHHH
T ss_pred EecCCCeeEEEEECCCCCCHHHHHHHHh
Confidence 4445556 7889999999999998763
No 311
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=33.51 E-value=14 Score=33.95 Aligned_cols=20 Identities=10% Similarity=0.044 Sum_probs=16.7
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.|-|..+||||++++..-.
T Consensus 325 i~lvG~~nvGKSsLl~~l~~ 344 (497)
T 3lvq_E 325 ILMLGLDAAGKTTILYKLKL 344 (497)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHhc
Confidence 56789999999999987643
No 312
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=33.00 E-value=15 Score=32.99 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=18.4
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-|.+-|.+||||++++|..-..
T Consensus 164 ~i~~vG~~nvGKStliN~L~~~ 185 (369)
T 3ec1_A 164 DVYVVGCTNVGKSTFINRIIEE 185 (369)
T ss_dssp CEEEECCTTSSHHHHHHHHHHH
T ss_pred cEEEEcCCCCchHHHHHHHHhh
Confidence 3678899999999999987654
No 313
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=32.93 E-value=19 Score=32.98 Aligned_cols=23 Identities=13% Similarity=-0.021 Sum_probs=18.5
Q ss_pred ceEeecCCcccchhhHhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.-|-|+|-+|+|||.+.+..-+.
T Consensus 64 ~~iLl~GppGtGKT~la~ala~~ 86 (456)
T 2c9o_A 64 RAVLLAGPPGTGKTALALAIAQE 86 (456)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHH
T ss_pred CeEEEECCCcCCHHHHHHHHHHH
Confidence 45889999999999998765443
No 314
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=32.89 E-value=22 Score=35.75 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=23.6
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+-++.|.=|-|||-.|+|||.+.+..-+
T Consensus 232 ~~g~~~p~GILL~GPPGTGKT~LAraiA~ 260 (806)
T 3cf2_A 232 AIGVKPPRGILLYGPPGTGKTLIARAVAN 260 (806)
T ss_dssp SCCCCCCCEEEEECCTTSCHHHHHHHHHT
T ss_pred hcCCCCCCeEEEECCCCCCHHHHHHHHHH
Confidence 34567789999999999999999876543
No 315
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=32.53 E-value=16 Score=35.72 Aligned_cols=22 Identities=14% Similarity=-0.040 Sum_probs=18.5
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-|.|+|-+|||||.+.+...+.
T Consensus 203 ~vLL~G~pGtGKT~la~~la~~ 224 (758)
T 3pxi_A 203 NPVLIGEPGVGKTAIAEGLAQQ 224 (758)
T ss_dssp EEEEESCTTTTTHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHHH
Confidence 4889999999999998876544
No 316
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=32.40 E-value=17 Score=35.44 Aligned_cols=22 Identities=18% Similarity=0.046 Sum_probs=18.4
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+-|+|-+|||||++.+...+.
T Consensus 490 ~~ll~G~~GtGKT~la~~la~~ 511 (758)
T 1r6b_X 490 SFLFAGPTGVGKTEVTVQLSKA 511 (758)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHH
Confidence 5889999999999998766544
No 317
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=32.37 E-value=18 Score=32.89 Aligned_cols=28 Identities=7% Similarity=0.122 Sum_probs=22.5
Q ss_pred cccccCCceEeecCCcccchhhHhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.|-+.--+++-|-|-+|+|||++|+-.-
T Consensus 48 sl~i~~Gei~~IiGpnGaGKSTLlr~i~ 75 (366)
T 3tui_C 48 SLHVPAGQIYGVIGASGAGKSTLIRCVN 75 (366)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHH
T ss_pred EEEEcCCCEEEEEcCCCchHHHHHHHHh
Confidence 3445556899999999999999998654
No 318
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=32.22 E-value=17 Score=34.00 Aligned_cols=22 Identities=18% Similarity=0.208 Sum_probs=18.0
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+.-|.|+|.+|+|||++.+.+.
T Consensus 50 ~~~iLl~GppGtGKT~lar~lA 71 (444)
T 1g41_A 50 PKNILMIGPTGVGKTEIARRLA 71 (444)
T ss_dssp CCCEEEECCTTSSHHHHHHHHH
T ss_pred CceEEEEcCCCCCHHHHHHHHH
Confidence 4568899999999999987543
No 319
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=32.12 E-value=17 Score=34.60 Aligned_cols=32 Identities=9% Similarity=-0.038 Sum_probs=25.2
Q ss_pred cccccccCCceEeecCCcccchhhHhhhhhhh
Q 025953 204 PCELVLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.-.|-++.-+.+-|-|-+|+|||++++-....
T Consensus 361 ~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~ 392 (582)
T 3b5x_A 361 HVSFSIPQGKTVALVGRSGSGKSTIANLFTRF 392 (582)
T ss_pred cceEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 34555666789999999999999999876543
No 320
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=31.72 E-value=19 Score=34.19 Aligned_cols=26 Identities=4% Similarity=-0.132 Sum_probs=20.1
Q ss_pred CCceEeecCCcccchhhHhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
-+..|.+-|.+|||||+++++.-+..
T Consensus 100 ~~~vI~ivG~~GvGKTTl~~kLA~~l 125 (504)
T 2j37_W 100 KQNVIMFVGLQGSGKTTTCSKLAYYY 125 (504)
T ss_dssp --EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 35567788999999999999887554
No 321
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=31.48 E-value=18 Score=31.24 Aligned_cols=24 Identities=4% Similarity=0.129 Sum_probs=19.5
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-..+.|.|-+|+|||.|....-.
T Consensus 97 ~g~i~~i~G~~gsGKT~la~~la~ 120 (322)
T 2i1q_A 97 SQSVTEFAGVFGSGKTQIMHQSCV 120 (322)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH
Confidence 357899999999999999765543
No 322
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=31.44 E-value=16 Score=32.56 Aligned_cols=27 Identities=4% Similarity=0.065 Sum_probs=21.1
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+..-+.+-|.|-.|+|||++++..-..
T Consensus 128 i~~G~i~~I~G~~GsGKTTL~~~l~~~ 154 (349)
T 1pzn_A 128 IETQAITEVFGEFGSGKTQLAHTLAVM 154 (349)
T ss_dssp EESSEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 334568999999999999998765443
No 323
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=31.43 E-value=23 Score=35.36 Aligned_cols=24 Identities=17% Similarity=0.020 Sum_probs=19.7
Q ss_pred ceEeecCCcccchhhHhhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
.-|-|+|-+|||||++.+...+.+
T Consensus 589 ~~vLl~Gp~GtGKT~lA~~la~~~ 612 (854)
T 1qvr_A 589 GSFLFLGPTGVGKTELAKTLAATL 612 (854)
T ss_dssp EEEEEBSCSSSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 478899999999999987765544
No 324
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=31.40 E-value=16 Score=33.26 Aligned_cols=20 Identities=15% Similarity=0.109 Sum_probs=17.1
Q ss_pred eEeecCCcccchhhHhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (245)
-|.|=|-+|||||+++|..-
T Consensus 182 kvaivG~~gvGKSTLln~l~ 201 (439)
T 1mky_A 182 KVAIVGRPNVGKSTLFNAIL 201 (439)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHh
Confidence 46788999999999998764
No 325
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=31.34 E-value=15 Score=35.00 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=19.4
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-+|.+-|.+|||||+++|..-.
T Consensus 65 ~~~V~vvG~~n~GKSTLIN~Llg 87 (550)
T 2qpt_A 65 KPMVLVAGQYSTGKTSFIQYLLE 87 (550)
T ss_dssp CCEEEEEEBTTSCHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 44788999999999999997643
No 326
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=31.26 E-value=17 Score=33.61 Aligned_cols=19 Identities=5% Similarity=0.034 Sum_probs=16.2
Q ss_pred EeecCCcccchhhHhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (245)
|.|-|-+|||||++|+..-
T Consensus 34 I~lvG~sGaGKSTLln~L~ 52 (418)
T 2qag_C 34 LMVVGESGLGKSTLINSLF 52 (418)
T ss_dssp EEEECCTTSSHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHh
Confidence 4788999999999998754
No 327
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=31.10 E-value=17 Score=33.17 Aligned_cols=20 Identities=15% Similarity=0.052 Sum_probs=16.7
Q ss_pred EeecCCcccchhhHhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.+-|.++||||++++..-.
T Consensus 178 i~lvG~~nvGKSSLin~l~~ 197 (436)
T 2hjg_A 178 FCLIGRPNVGKSSLVNAMLG 197 (436)
T ss_dssp EEEECSTTSSHHHHHHHHHT
T ss_pred EEEEcCCCCCHHHHHHHHhC
Confidence 56779999999999987643
No 328
>1lnz_A SPO0B-associated GTP-binding protein; GTPase, OBG, stringent factor, stress response, sporulation, large G-protein, structural genomics, PSI; HET: G4P; 2.60A {Bacillus subtilis} SCOP: b.117.1.1 c.37.1.8
Probab=31.06 E-value=17 Score=32.46 Aligned_cols=22 Identities=27% Similarity=0.209 Sum_probs=18.1
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
=|.|-|.++||||++|+....+
T Consensus 160 ~V~lvG~~nvGKSTLln~L~~~ 181 (342)
T 1lnz_A 160 DVGLVGFPSVGKSTLLSVVSSA 181 (342)
T ss_dssp CEEEESSTTSSHHHHHHHSEEE
T ss_pred eeeeeCCCCCCHHHHHHHHHcC
Confidence 3678899999999999976544
No 329
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=30.97 E-value=75 Score=25.26 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=24.2
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcCCCc
Q 025953 136 PESKLLVVCQ---EGLRYIRFCRFHRAARCWK 164 (245)
Q Consensus 136 ~d~~VVVyC~---~G~RS~~aa~~L~~~G~~~ 164 (245)
++++|+++++ +|.....++..|++.|..+
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~ 128 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRS 128 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCE
Confidence 3688999987 8999999999999988643
No 330
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=30.62 E-value=17 Score=33.28 Aligned_cols=23 Identities=9% Similarity=0.107 Sum_probs=19.5
Q ss_pred cCCceEeecCCcccchhhHhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
..-+++.|.|-.|+|||.++...
T Consensus 176 ~~Gei~~I~G~sGsGKTTLl~~l 198 (400)
T 3lda_A 176 ETGSITELFGEFRTGKSQLCHTL 198 (400)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHH
T ss_pred CCCcEEEEEcCCCCChHHHHHHH
Confidence 34578999999999999999853
No 331
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=30.60 E-value=84 Score=25.91 Aligned_cols=28 Identities=14% Similarity=0.245 Sum_probs=23.7
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcCCC
Q 025953 136 PESKLLVVCQ---EGLRYIRFCRFHRAARCW 163 (245)
Q Consensus 136 ~d~~VVVyC~---~G~RS~~aa~~L~~~G~~ 163 (245)
++++|+++++ +|.....++..|++.|..
T Consensus 115 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~ 145 (204)
T 3hvu_A 115 EGRDILIVEDIIDSGLTLSYLVDLFKYRKAK 145 (204)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHHcCCC
Confidence 3688999886 899999999999999854
No 332
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=30.58 E-value=18 Score=31.87 Aligned_cols=24 Identities=17% Similarity=0.263 Sum_probs=19.2
Q ss_pred cCCceEeecCCcccchhhHhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
..| .|.+-|..+||||++|+..-.
T Consensus 30 ~~~-~I~vvG~~~~GKSSLln~L~g 53 (353)
T 2x2e_A 30 DLP-QIAVVGGQSAGKSSVLENFVG 53 (353)
T ss_dssp CCC-EEEEECBTTSSHHHHHHTTTT
T ss_pred CCC-eEEEECCCCCCHHHHHHHHhC
Confidence 344 578889999999999997643
No 333
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=30.54 E-value=19 Score=33.63 Aligned_cols=23 Identities=13% Similarity=0.294 Sum_probs=19.4
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
+..|.|.|-.|+|||++....-+
T Consensus 147 ~~~v~I~G~~GiGKTtLa~~~~~ 169 (591)
T 1z6t_A 147 PGWVTIHGMAGCGKSVLAAEAVR 169 (591)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHC
T ss_pred CceEEEEcCCCCCHHHHHHHHHh
Confidence 45799999999999999876643
No 334
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=30.48 E-value=15 Score=32.98 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=18.2
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-|.+-|.+||||++++|..-..
T Consensus 162 ~i~~vG~~nvGKStliN~L~~~ 183 (368)
T 3h2y_A 162 DVYVVGCTNVGKSTFINRMIKE 183 (368)
T ss_dssp CEEEEEBTTSSHHHHHHHHHHH
T ss_pred eEEEecCCCCChhHHHHHHHhh
Confidence 3678899999999999987554
No 335
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=30.38 E-value=23 Score=31.29 Aligned_cols=24 Identities=4% Similarity=-0.078 Sum_probs=19.6
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-+.+.|.|-+|+|||.|+...-.
T Consensus 121 ~G~i~~I~G~~GsGKTtla~~la~ 144 (343)
T 1v5w_A 121 SMAITEAFGEFRTGKTQLSHTLCV 144 (343)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH
Confidence 457899999999999999875433
No 336
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=30.38 E-value=18 Score=34.38 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=19.8
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+.+-|-|-+|+|||++|+-.--.
T Consensus 312 Ge~~~i~G~NGsGKSTLlk~l~Gl 335 (538)
T 1yqt_A 312 GEVIGIVGPNGIGKTTFVKMLAGV 335 (538)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 367888999999999999976543
No 337
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=30.08 E-value=39 Score=31.18 Aligned_cols=28 Identities=11% Similarity=0.045 Sum_probs=21.8
Q ss_pred cCCceEeecCCcccchhhHhhhhhhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
..|..|.+-|-.|||||++..+.-++-.
T Consensus 98 ~~~~vI~ivG~~GvGKTT~a~~LA~~l~ 125 (433)
T 2xxa_A 98 QPPAVVLMAGLQGAGKTTSVGKLGKFLR 125 (433)
T ss_dssp SSSEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3456777779999999999988776554
No 338
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=30.03 E-value=20 Score=26.37 Aligned_cols=23 Identities=17% Similarity=0.349 Sum_probs=15.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHH
Q 025953 137 ESKLLVVCQEGLRYIRFCRFHRA 159 (245)
Q Consensus 137 d~~VVVyC~~G~RS~~aa~~L~~ 159 (245)
.-+|++.|.+|+.+..++..+++
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~ 26 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEK 26 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHH
T ss_pred ceEEEEECCChHhHHHHHHHHHH
Confidence 34699999988765566655543
No 339
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=30.01 E-value=20 Score=33.03 Aligned_cols=21 Identities=14% Similarity=0.271 Sum_probs=17.5
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-|.+-|.++||||++++..-.
T Consensus 36 kI~IvG~~~vGKSTLin~L~~ 56 (423)
T 3qq5_A 36 YIVVAGRRNVGKSSFMNALVG 56 (423)
T ss_dssp EEEEECSCSTTTTTTTTSSCC
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 477889999999999987643
No 340
>1xzp_A Probable tRNA modification GTPase TRME; GTP-binding, THF-binding, hydrolase; 2.30A {Thermotoga maritima} SCOP: a.24.25.1 c.37.1.8 d.250.1.2 PDB: 1xzq_A* 1xzp_B 1xzq_B*
Probab=29.80 E-value=12 Score=35.09 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=18.2
Q ss_pred EeecCCcccchhhHhhhhhhh
Q 025953 215 VDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (245)
|.|-|.++||||++||..-..
T Consensus 246 V~ivG~pnvGKSSLln~L~~~ 266 (482)
T 1xzp_A 246 MVIVGKPNVGKSTLLNRLLNE 266 (482)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECcCCCcHHHHHHHHHCC
Confidence 779999999999999976544
No 341
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=29.79 E-value=26 Score=32.40 Aligned_cols=27 Identities=7% Similarity=-0.177 Sum_probs=21.5
Q ss_pred CCceEeecCCcccchhhHhhhhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQHASQ 237 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
.+..|.+-|-.|+|||+++.+.-....
T Consensus 97 ~~~vi~i~G~~GsGKTT~~~~LA~~l~ 123 (425)
T 2ffh_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYK 123 (425)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 456777789999999999988765543
No 342
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=29.76 E-value=21 Score=31.14 Aligned_cols=23 Identities=4% Similarity=0.068 Sum_probs=19.1
Q ss_pred CCceEeecCCcccchhhHhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.-+.+.|.|-+|+|||.+....-
T Consensus 106 ~G~i~~i~G~~GsGKT~la~~la 128 (324)
T 2z43_A 106 TRTMTEFFGEFGSGKTQLCHQLS 128 (324)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHhHHHHHHH
Confidence 35789999999999999976543
No 343
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=29.57 E-value=24 Score=35.14 Aligned_cols=29 Identities=10% Similarity=-0.075 Sum_probs=23.0
Q ss_pred cccCCceEeecCCcccchhhHhhhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
.+..+.-+-|+|-+|+|||.+.+-.-+..
T Consensus 507 ~~~~~~~vLL~GppGtGKT~Lakala~~~ 535 (806)
T 1ypw_A 507 GMTPSKGVLFYGPPGCGKTLLAKAIANEC 535 (806)
T ss_dssp CCCCCCCCCCBCCTTSSHHHHHHHHHHHH
T ss_pred CCCCCceeEEECCCCCCHHHHHHHHHHHh
Confidence 34566779999999999999988766544
No 344
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=29.31 E-value=23 Score=29.99 Aligned_cols=21 Identities=10% Similarity=-0.012 Sum_probs=16.7
Q ss_pred ceEeecCCcccchhhHhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (245)
.-+.++|-.|+|||.+...+.
T Consensus 59 n~ili~GPPGtGKTt~a~ala 79 (212)
T 1tue_A 59 NCLVFCGPANTGKSYFGMSFI 79 (212)
T ss_dssp SEEEEESCGGGCHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHH
Confidence 358899999999998765443
No 345
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=28.92 E-value=19 Score=33.29 Aligned_cols=26 Identities=19% Similarity=0.317 Sum_probs=19.9
Q ss_pred cCCceEeecCCcccchhhHhhh-hhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKN-CQHA 235 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (245)
..-+++.|-|-+|+|||.|.-+ +.|+
T Consensus 195 ~~G~liiIaG~pG~GKTtlal~ia~~~ 221 (444)
T 3bgw_A 195 KRRNFVLIAARPSMGKTAFALKQAKNM 221 (444)
T ss_dssp CSSCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHH
Confidence 3457899999999999999654 3443
No 346
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=28.74 E-value=18 Score=34.45 Aligned_cols=31 Identities=13% Similarity=-0.017 Sum_probs=24.5
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-.|-++.-+.+-|-|-+|+|||++++-....
T Consensus 362 v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~ 392 (582)
T 3b60_A 362 INLKIPAGKTVALVGRSGSGKSTIASLITRF 392 (582)
T ss_dssp EEEEECTTCEEEEEECTTSSHHHHHHHHTTT
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhhc
Confidence 3455666789999999999999999876543
No 347
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=28.73 E-value=24 Score=31.41 Aligned_cols=21 Identities=5% Similarity=0.080 Sum_probs=17.9
Q ss_pred CceEeecCCcccchhhHhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~ 232 (245)
-+.+.|+|-.|+|||.++...
T Consensus 61 G~iv~I~G~pGsGKTtLal~l 81 (349)
T 2zr9_A 61 GRVIEIYGPESSGKTTVALHA 81 (349)
T ss_dssp TSEEEEEESTTSSHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHH
Confidence 468999999999999996554
No 348
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B*
Probab=28.68 E-value=23 Score=36.17 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=29.0
Q ss_pred cccccccccccC--CceEeecCCcccchhhHhhhhhhhhhh
Q 025953 200 VPVVPCELVLKI--PDFVDLNPCVTVGEIEFLKNCQHASQM 238 (245)
Q Consensus 200 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (245)
...+|.++-+.+ -+++.|-|-.|.|||++|+-.--..-|
T Consensus 659 ~~~V~ndvsl~~~~g~i~~ItGPNGaGKSTlLr~i~~i~~~ 699 (918)
T 3thx_B 659 DQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIM 699 (918)
T ss_dssp SSSCCEEEEECTTSCCEEEEESCCCHHHHHHHHHHHHHHHH
T ss_pred CceecccccccCCCCeEEEEECCCCCchHHHHHHHHHHHHH
Confidence 345667777765 469999999999999999976433333
No 349
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=28.24 E-value=85 Score=25.33 Aligned_cols=28 Identities=14% Similarity=0.059 Sum_probs=23.8
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcCCC
Q 025953 136 PESKLLVVCQ---EGLRYIRFCRFHRAARCW 163 (245)
Q Consensus 136 ~d~~VVVyC~---~G~RS~~aa~~L~~~G~~ 163 (245)
++++|+++++ +|.....+...|++.|..
T Consensus 93 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~ 123 (186)
T 3o7m_A 93 TGKNVIVVEDIIDSGLTLHFLKDHFFMHKPK 123 (186)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCS
T ss_pred CcCEEEEEcCeeCCcHHHHHHHHHHHhcCCc
Confidence 3688999986 899999999999998854
No 350
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=28.24 E-value=89 Score=24.92 Aligned_cols=28 Identities=11% Similarity=-0.003 Sum_probs=23.4
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcCCC
Q 025953 136 PESKLLVVCQ---EGLRYIRFCRFHRAARCW 163 (245)
Q Consensus 136 ~d~~VVVyC~---~G~RS~~aa~~L~~~G~~ 163 (245)
++++|+++++ +|.....+...|++.|..
T Consensus 90 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~ 120 (177)
T 3ohp_A 90 KGKDVLLVEDIIDTGNTLNKVKEILALREPK 120 (177)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCS
T ss_pred CCCEEEEEeeEeCcHHHHHHHHHHHHhcCCc
Confidence 3688999986 899999999999988754
No 351
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=27.57 E-value=10 Score=31.98 Aligned_cols=24 Identities=13% Similarity=-0.029 Sum_probs=20.1
Q ss_pred ceEeecCCcccchhhHhhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+++-|-|-+|+|||++|+-...+-
T Consensus 28 ~~~~i~GpnGsGKSTll~~i~g~~ 51 (227)
T 1qhl_A 28 LVTTLSGGNGAGKSTTMAAFVTAL 51 (227)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHhccc
Confidence 677899999999999998765543
No 352
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=27.54 E-value=20 Score=34.18 Aligned_cols=31 Identities=10% Similarity=0.078 Sum_probs=24.7
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-.|.++.-+.+-|-|-+|+|||++++-....
T Consensus 362 isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~ 392 (587)
T 3qf4_A 362 VNFSVKPGSLVAVLGETGSGKSTLMNLIPRL 392 (587)
T ss_dssp EEEEECTTCEEEEECSSSSSHHHHHHTTTTS
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 3455666789999999999999999876543
No 353
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=27.48 E-value=93 Score=24.90 Aligned_cols=28 Identities=18% Similarity=0.192 Sum_probs=23.7
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcCCC
Q 025953 136 PESKLLVVCQ---EGLRYIRFCRFHRAARCW 163 (245)
Q Consensus 136 ~d~~VVVyC~---~G~RS~~aa~~L~~~G~~ 163 (245)
++++|+++++ +|.....++..|++.|..
T Consensus 94 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~ 124 (181)
T 2ywu_A 94 HGRDVIVVEDIVDTGLTLSYLLDYLEARKPA 124 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCS
T ss_pred CCCEEEEECCeeCChHHHHHHHHHHHhcCCc
Confidence 3688999886 899999999999998854
No 354
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=27.28 E-value=18 Score=34.84 Aligned_cols=23 Identities=4% Similarity=-0.029 Sum_probs=19.4
Q ss_pred eEeecCCcccchhhHhhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
=|-|.|-+|||||.+++...+.+
T Consensus 329 ~vLL~GppGtGKT~LAr~la~~~ 351 (595)
T 3f9v_A 329 HILIIGDPGTAKSQMLQFISRVA 351 (595)
T ss_dssp CEEEEESSCCTHHHHHHSSSTTC
T ss_pred ceEEECCCchHHHHHHHHHHHhC
Confidence 58899999999999998776544
No 355
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=27.28 E-value=21 Score=33.92 Aligned_cols=24 Identities=8% Similarity=0.084 Sum_probs=19.6
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
--+++-|-|-+|+|||++|+-.--
T Consensus 293 ~Gei~~i~G~nGsGKSTLl~~l~G 316 (538)
T 3ozx_A 293 EGEIIGILGPNGIGKTTFARILVG 316 (538)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 346788899999999999987643
No 356
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=27.25 E-value=22 Score=33.88 Aligned_cols=30 Identities=13% Similarity=0.004 Sum_probs=24.0
Q ss_pred ccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 205 CELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-.|-++.-+.+-|-|-+|+|||++++-...
T Consensus 363 isl~i~~G~~~~ivG~sGsGKSTLl~~l~g 392 (595)
T 2yl4_A 363 FSLSIPSGSVTALVGPSGSGKSTVLSLLLR 392 (595)
T ss_dssp EEEEECTTCEEEEECCTTSSSTHHHHHHTT
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 445566678999999999999999986543
No 357
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=27.24 E-value=41 Score=24.93 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=15.4
Q ss_pred CCeEEEEcCCChhHHH-HHHHHH
Q 025953 137 ESKLLVVCQEGLRYIR-FCRFHR 158 (245)
Q Consensus 137 d~~VVVyC~~G~RS~~-aa~~L~ 158 (245)
..+|++.|.+|+.+.. ++..++
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~ 43 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIK 43 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHH
Confidence 3579999999976554 455444
No 358
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=27.23 E-value=22 Score=34.65 Aligned_cols=24 Identities=13% Similarity=-0.068 Sum_probs=19.3
Q ss_pred CCceEeecCCcccchhhHhhhhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
...-+.|+|-+|||||.+.+..-+
T Consensus 206 ~~~~vlL~G~~GtGKT~la~~la~ 229 (758)
T 1r6b_X 206 RKNNPLLVGESGVGKTAIAEGLAW 229 (758)
T ss_dssp SSCEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHH
Confidence 345678999999999999876544
No 359
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=27.20 E-value=21 Score=34.49 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=19.7
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+++-|-|-+|+|||++|+-.--.
T Consensus 382 Gei~~i~G~NGsGKSTLlk~l~Gl 405 (607)
T 3bk7_A 382 GEVIGIVGPNGIGKTTFVKMLAGV 405 (607)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHhcC
Confidence 467888999999999999976543
No 360
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=26.93 E-value=32 Score=34.26 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=29.1
Q ss_pred ccccccccccCCceEeecCCcccchhhHhhhhhhhhhhh
Q 025953 201 PVVPCELVLKIPDFVDLNPCVTVGEIEFLKNCQHASQMA 239 (245)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (245)
..++.++-+. -+++.|-|-+|.|||++|+-.--...|+
T Consensus 566 ~~vl~disl~-g~i~~I~GpNGsGKSTlLr~iagl~~~~ 603 (765)
T 1ewq_A 566 EFVPNDLEMA-HELVLITGPNMAGKSTFLRQTALIALLA 603 (765)
T ss_dssp CCCCEEEEES-SCEEEEESCSSSSHHHHHHHHHHHHHHH
T ss_pred ceEeeeccCC-CcEEEEECCCCCChHHHHHHHHhhhhhc
Confidence 3456666666 8899999999999999999776544443
No 361
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=26.91 E-value=24 Score=32.86 Aligned_cols=28 Identities=7% Similarity=-0.148 Sum_probs=22.3
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHAS 236 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
+..-++|-|-|-+|+|||++|+...-..
T Consensus 135 i~~Ge~v~IvGpnGsGKSTLlr~L~Gl~ 162 (460)
T 2npi_A 135 NFEGPRVVIVGGSQTGKTSLSRTLCSYA 162 (460)
T ss_dssp SSSCCCEEEEESTTSSHHHHHHHHHHTT
T ss_pred eCCCCEEEEECCCCCCHHHHHHHHhCcc
Confidence 3345789999999999999999765443
No 362
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=26.80 E-value=21 Score=33.89 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=23.6
Q ss_pred cccccCCceEeecCCcccchhhHhhhhhh
Q 025953 206 ELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-++.-+.+-|-|-+|+|||++++-...
T Consensus 361 sl~i~~G~~~~ivG~sGsGKSTll~~l~g 389 (578)
T 4a82_A 361 NLSIEKGETVAFVGMSGGGKSTLINLIPR 389 (578)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHTTTTT
T ss_pred EEEECCCCEEEEECCCCChHHHHHHHHhc
Confidence 45566678999999999999999986543
No 363
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=26.66 E-value=24 Score=33.85 Aligned_cols=21 Identities=5% Similarity=-0.135 Sum_probs=17.4
Q ss_pred CceEeecCCcccchhhHhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~ 232 (245)
..++.+.|..|+|||.++...
T Consensus 195 ~~~~li~GppGTGKT~~~~~~ 215 (624)
T 2gk6_A 195 RPLSLIQGPPGTGKTVTSATI 215 (624)
T ss_dssp CSEEEEECCTTSCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHH
Confidence 457889999999999987654
No 364
>3c5h_A Glucocorticoid receptor DNA-binding factor 1; RAS, GTPase, glucorticoid receptor, structural genomics consortium, SGC, alternative splicing; HET: GNP; 1.80A {Homo sapiens}
Probab=26.56 E-value=20 Score=29.88 Aligned_cols=17 Identities=6% Similarity=0.036 Sum_probs=14.4
Q ss_pred cCCcccchhhHhhhhhh
Q 025953 218 NPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 218 ~~~~~~~~~~~~~~~~~ 234 (245)
.|-.|||||++++....
T Consensus 34 ~~~~~vGKSsLi~~l~~ 50 (255)
T 3c5h_A 34 KGQCGIGKSCLCNRFVR 50 (255)
T ss_dssp TTTCCCSHHHHHHHHHC
T ss_pred cCCCCcCHHHHHHHHHh
Confidence 67779999999998765
No 365
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=25.99 E-value=58 Score=23.87 Aligned_cols=25 Identities=20% Similarity=0.299 Sum_probs=17.1
Q ss_pred CeEEEEcCCChhHHHHHH-----HHHHcCC
Q 025953 138 SKLLVVCQEGLRYIRFCR-----FHRAARC 162 (245)
Q Consensus 138 ~~VVVyC~~G~RS~~aa~-----~L~~~G~ 162 (245)
.+|+++|.+|..+..... .+.+.|+
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi 48 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGV 48 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCC
Confidence 579999999976555444 4445555
No 366
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=25.95 E-value=27 Score=32.14 Aligned_cols=23 Identities=13% Similarity=0.156 Sum_probs=19.2
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
+..|.|-|..|+|||++.+....
T Consensus 39 ~~~IvlvGlpGsGKSTia~~La~ 61 (469)
T 1bif_A 39 PTLIVMVGLPARGKTYISKKLTR 61 (469)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHHHHHH
Confidence 45789999999999999887543
No 367
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=25.93 E-value=42 Score=24.68 Aligned_cols=25 Identities=4% Similarity=0.061 Sum_probs=17.9
Q ss_pred CeEEEEcCCChhHHHHHHHH----HHcCC
Q 025953 138 SKLLVVCQEGLRYIRFCRFH----RAARC 162 (245)
Q Consensus 138 ~~VVVyC~~G~RS~~aa~~L----~~~G~ 162 (245)
++|++.|.+|..|..++..+ ++.|+
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi 32 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEV 32 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCC
Confidence 57999999998766666544 45565
No 368
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=25.73 E-value=30 Score=31.13 Aligned_cols=22 Identities=14% Similarity=0.099 Sum_probs=17.9
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
.+.|+|-+|+|||.+....-+.
T Consensus 125 viLI~GpPGsGKTtLAlqlA~~ 146 (331)
T 2vhj_A 125 MVIVTGKGNSGKTPLVHALGEA 146 (331)
T ss_dssp EEEEECSCSSSHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHh
Confidence 4679999999999998766543
No 369
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=25.70 E-value=28 Score=34.00 Aligned_cols=24 Identities=13% Similarity=-0.103 Sum_probs=20.1
Q ss_pred CceEeecCCcccchhhHhhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+.+|.|.|..|+|||++.+.....
T Consensus 52 g~lIvLtGlsGSGKSTlAr~La~~ 75 (630)
T 1x6v_B 52 GCTVWLTGLSGAGKTTVSMALEEY 75 (630)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHH
Confidence 468999999999999998876543
No 370
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=25.08 E-value=38 Score=34.58 Aligned_cols=34 Identities=9% Similarity=0.173 Sum_probs=26.9
Q ss_pred ccccccccccCC--ceEeecCCcccchhhHhhhhhh
Q 025953 201 PVVPCELVLKIP--DFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 201 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
..+|.++-+.+. +++.|-|-+|.|||++|+-.--
T Consensus 649 ~~v~ndisl~~~~g~i~~ItGpNGsGKSTlLr~ial 684 (934)
T 3thx_A 649 AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGV 684 (934)
T ss_dssp CCCCEEEEEETTTBCEEEEECCTTSSHHHHHHHHHH
T ss_pred eeecccceeecCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 355666666664 7999999999999999997633
No 371
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=24.80 E-value=31 Score=31.11 Aligned_cols=23 Identities=9% Similarity=0.065 Sum_probs=18.7
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-..+.|.|-.|+|||.++...-.
T Consensus 61 G~i~~I~GppGsGKSTLal~la~ 83 (356)
T 3hr8_A 61 GRIVEIFGQESSGKTTLALHAIA 83 (356)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHH
Confidence 35889999999999999865543
No 372
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=24.70 E-value=24 Score=33.76 Aligned_cols=31 Identities=13% Similarity=0.017 Sum_probs=24.5
Q ss_pred cccccccCCceEeecCCcccchhhHhhhhhh
Q 025953 204 PCELVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.-.|-++.-+.+-|-|-+|+|||++++-...
T Consensus 373 ~isl~i~~G~~~~ivG~sGsGKSTll~~l~g 403 (598)
T 3qf4_B 373 DITFHIKPGQKVALVGPTGSGKTTIVNLLMR 403 (598)
T ss_dssp SEEEECCTTCEEEEECCTTSSTTHHHHHHTT
T ss_pred ceEEEEcCCCEEEEECCCCCcHHHHHHHHhc
Confidence 3445566678999999999999999986543
No 373
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=24.13 E-value=28 Score=32.93 Aligned_cols=25 Identities=16% Similarity=-0.024 Sum_probs=20.8
Q ss_pred ccCCceEeecCCcccchhhHhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+..-+++-|-|-+|+|||++|+..-
T Consensus 44 i~~Ge~~~LvG~NGaGKSTLlk~l~ 68 (538)
T 1yqt_A 44 VKEGMVVGIVGPNGTGKSTAVKILA 68 (538)
T ss_dssp CCTTSEEEEECCTTSSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHh
Confidence 3455789999999999999998754
No 374
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=24.02 E-value=84 Score=24.72 Aligned_cols=30 Identities=13% Similarity=-0.027 Sum_probs=24.4
Q ss_pred cCCCCCeEEEEcCCChhHHHHHHHHHHcCC
Q 025953 133 QFSPESKLLVVCQEGLRYIRFCRFHRAARC 162 (245)
Q Consensus 133 ~l~~d~~VVVyC~~G~RS~~aa~~L~~~G~ 162 (245)
...++.+++|+|.+-..+...+..|...|+
T Consensus 42 ~~~~~~k~lVF~~~~~~~~~l~~~L~~~g~ 71 (185)
T 2jgn_A 42 ATGKDSLTLVFVETKKGADSLEDFLYHEGY 71 (185)
T ss_dssp HC-CCSCEEEEESCHHHHHHHHHHHHHTTC
T ss_pred hcCCCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 344567899999998889999999998875
No 375
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=23.81 E-value=31 Score=31.86 Aligned_cols=28 Identities=18% Similarity=0.084 Sum_probs=22.3
Q ss_pred ccccCCceEeecCCcccchhhHhhhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
|.+.--+++-|-|-.|+|||++|+..-.
T Consensus 152 l~i~~Gq~~~IvG~sGsGKSTLl~~Iag 179 (438)
T 2dpy_A 152 LTVGRGQRMGLFAGSGVGKSVLLGMMAR 179 (438)
T ss_dssp SCCBTTCEEEEEECTTSSHHHHHHHHHH
T ss_pred EEecCCCEEEEECCCCCCHHHHHHHHhc
Confidence 4455567899999999999999986543
No 376
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=23.70 E-value=99 Score=24.94 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=24.2
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcCCCc
Q 025953 136 PESKLLVVCQ---EGLRYIRFCRFHRAARCWK 164 (245)
Q Consensus 136 ~d~~VVVyC~---~G~RS~~aa~~L~~~G~~~ 164 (245)
++++|+++++ +|.....++..|++.|..+
T Consensus 117 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~ 148 (205)
T 1yfz_A 117 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRS 148 (205)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSE
T ss_pred CcCEEEEECCccCcHHHHHHHHHHHHhcCCCE
Confidence 3689999987 8999999999999988643
No 377
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=23.57 E-value=30 Score=32.05 Aligned_cols=23 Identities=4% Similarity=0.036 Sum_probs=18.6
Q ss_pred cCCceEeecCCcccchhhHhhhh
Q 025953 210 KIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
..-+++.|.|-+|+|||.|.-+.
T Consensus 240 ~~G~l~li~G~pG~GKT~lal~~ 262 (503)
T 1q57_A 240 RGGEVIMVTSGSGMVMSTFVRQQ 262 (503)
T ss_dssp CTTCEEEEEESSCHHHHHHHHHH
T ss_pred CCCeEEEEeecCCCCchHHHHHH
Confidence 34568999999999999997543
No 378
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=23.57 E-value=32 Score=33.02 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=18.8
Q ss_pred ccCCceEeecCCcccchhhHhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+.+|. |.|-|-.|+|||++|+..-
T Consensus 43 l~lp~-iaIvG~nGsGKSTLL~~I~ 66 (608)
T 3szr_A 43 LALPA-IAVIGDQSSGKSSVLEALS 66 (608)
T ss_dssp CCCCC-EECCCCTTSCHHHHHHHHH
T ss_pred ccCCe-EEEECCCCChHHHHHHHHh
Confidence 34443 7888999999999998754
No 379
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=23.56 E-value=24 Score=35.17 Aligned_cols=22 Identities=14% Similarity=-0.000 Sum_probs=18.4
Q ss_pred eEeecCCcccchhhHhhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
-+.|+|-+|||||.+++..-+.
T Consensus 193 ~vlL~G~pG~GKT~la~~la~~ 214 (854)
T 1qvr_A 193 NPVLIGEPGVGKTAIVEGLAQR 214 (854)
T ss_dssp CCEEEECTTSCHHHHHHHHHHH
T ss_pred ceEEEcCCCCCHHHHHHHHHHH
Confidence 4789999999999999876544
No 380
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=23.45 E-value=29 Score=33.55 Aligned_cols=24 Identities=13% Similarity=0.290 Sum_probs=19.5
Q ss_pred cccCCceEeecCCcccchhhHhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKN 231 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~ 231 (245)
-+..-+++-|-|-+|+|||++|+-
T Consensus 344 ~I~~Ge~vaIiGpnGsGKSTLl~~ 367 (670)
T 3ux8_A 344 KIPLGTFVAVTGVSGSGKSTLVNE 367 (670)
T ss_dssp EEETTSEEEEECSTTSSHHHHHTT
T ss_pred EecCCCEEEEEeeCCCCHHHHHHH
Confidence 334457889999999999999974
No 381
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=23.14 E-value=30 Score=33.39 Aligned_cols=25 Identities=16% Similarity=-0.023 Sum_probs=20.9
Q ss_pred ccCCceEeecCCcccchhhHhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+..-+++-|-|-+|+|||++|+..-
T Consensus 114 i~~Ge~~~LiG~NGsGKSTLlkiL~ 138 (607)
T 3bk7_A 114 VKDGMVVGIVGPNGTGKTTAVKILA 138 (607)
T ss_dssp CCTTSEEEEECCTTSSHHHHHHHHT
T ss_pred CCCCCEEEEECCCCChHHHHHHHHh
Confidence 3456799999999999999998753
No 382
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=23.06 E-value=28 Score=30.27 Aligned_cols=23 Identities=17% Similarity=0.159 Sum_probs=19.2
Q ss_pred ceEeecCCcccchhhHhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..|.|+|-.|+|||.+.+-+-+.
T Consensus 105 n~~~l~GppgtGKt~~a~ala~~ 127 (267)
T 1u0j_A 105 NTIWLFGPATTGKTNIAEAIAHT 127 (267)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHhh
Confidence 47999999999999998866553
No 383
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=22.87 E-value=31 Score=33.37 Aligned_cols=21 Identities=10% Similarity=0.028 Sum_probs=17.7
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.|-|-|-+|+|||++|+-.--
T Consensus 380 iv~iiG~NGsGKSTLlk~l~G 400 (608)
T 3j16_B 380 ILVMMGENGTGKTTLIKLLAG 400 (608)
T ss_dssp EEEEESCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHhc
Confidence 388999999999999986643
No 384
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=22.75 E-value=81 Score=27.09 Aligned_cols=29 Identities=31% Similarity=0.348 Sum_probs=19.1
Q ss_pred HHHHhhhcCCCCCeEEEEcCCC-hhHHHHH
Q 025953 126 FVQSVKSQFSPESKLLVVCQEG-LRYIRFC 154 (245)
Q Consensus 126 f~~~l~~~l~~d~~VVVyC~~G-~RS~~aa 154 (245)
|+..+......+.||||.|..| .|+..++
T Consensus 198 ~i~~v~~~~~~~~PivVHCsaGvGRTGtfi 227 (287)
T 2b49_A 198 FVNYVRSLRVDSEPVLVHCSAGIGRTGVLV 227 (287)
T ss_dssp HHHHHHHHCCTTCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHhccCCCcEEEEcCCCCcHHHHHH
Confidence 4444444444568999999954 6777654
No 385
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=22.71 E-value=28 Score=32.54 Aligned_cols=23 Identities=17% Similarity=0.076 Sum_probs=19.8
Q ss_pred ccCCceEeecCCcccchhhHhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKN 231 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~ 231 (245)
+..-+++-|-|-+|+|||++++.
T Consensus 36 i~~Ge~~~l~G~nGsGKSTL~~~ 58 (525)
T 1tf7_A 36 LPIGRSTLVSGTSGTGKTLFSIQ 58 (525)
T ss_dssp EETTSEEEEEESTTSSHHHHHHH
T ss_pred CCCCeEEEEEcCCCCCHHHHHHH
Confidence 34457899999999999999987
No 386
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=22.70 E-value=30 Score=33.08 Aligned_cols=27 Identities=7% Similarity=-0.096 Sum_probs=21.9
Q ss_pred ccCCceEeecCCcccchhhHhhhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
+.-.+.|.|-|..|+|||++++.....
T Consensus 366 ~~~G~iI~LiG~sGSGKSTLar~La~~ 392 (552)
T 3cr8_A 366 ERQGFTVFFTGLSGAGKSTLARALAAR 392 (552)
T ss_dssp GGSCEEEEEEESSCHHHHHHHHHHHHH
T ss_pred cccceEEEEECCCCChHHHHHHHHHHh
Confidence 345678999999999999999876543
No 387
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=22.69 E-value=50 Score=25.12 Aligned_cols=26 Identities=19% Similarity=0.302 Sum_probs=17.7
Q ss_pred CCeEEEEcCCChhHHHH-HH----HHHHcCC
Q 025953 137 ESKLLVVCQEGLRYIRF-CR----FHRAARC 162 (245)
Q Consensus 137 d~~VVVyC~~G~RS~~a-a~----~L~~~G~ 162 (245)
-.+|+++|.+|+.+... +. .+.+.|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999776655 43 4444565
No 388
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=22.55 E-value=35 Score=31.97 Aligned_cols=22 Identities=14% Similarity=0.051 Sum_probs=18.4
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+..|.|.|--|||||++-...-
T Consensus 152 ~~vv~I~G~gGvGKTtLA~~v~ 173 (549)
T 2a5y_B 152 SFFLFLHGRAGSGKSVIASQAL 173 (549)
T ss_dssp SEEEEEECSTTSSHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHH
Confidence 4678999999999999876554
No 389
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=22.26 E-value=29 Score=32.40 Aligned_cols=23 Identities=4% Similarity=0.056 Sum_probs=19.0
Q ss_pred CceEeecCCcccchhhHhhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
-+.+-|.|-+|+|||++++..-.
T Consensus 281 G~i~~i~G~~GsGKSTLl~~l~g 303 (525)
T 1tf7_A 281 DSIILATGATGTGKTLLVSRFVE 303 (525)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHH
Confidence 35788999999999999987644
No 390
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=22.10 E-value=32 Score=30.71 Aligned_cols=27 Identities=15% Similarity=0.080 Sum_probs=20.9
Q ss_pred cccCCceEeecCCcccchhhHhhhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.--+.+-|-|-.|+|||++|+..-.
T Consensus 67 ~i~~Gq~~gIiG~nGaGKTTLl~~I~g 93 (347)
T 2obl_A 67 TCGIGQRIGIFAGSGVGKSTLLGMICN 93 (347)
T ss_dssp CEETTCEEEEEECTTSSHHHHHHHHHH
T ss_pred eecCCCEEEEECCCCCCHHHHHHHHhc
Confidence 344456788999999999999986543
No 391
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=22.08 E-value=34 Score=32.86 Aligned_cols=21 Identities=5% Similarity=0.015 Sum_probs=17.7
Q ss_pred CCceEeecCCcccchhhHhhh
Q 025953 211 IPDFVDLNPCVTVGEIEFLKN 231 (245)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~ 231 (245)
-.++..+.|-.|+|||..+-.
T Consensus 204 ~~~~~lI~GPPGTGKT~ti~~ 224 (646)
T 4b3f_X 204 QKELAIIHGPPGTGKTTTVVE 224 (646)
T ss_dssp CSSEEEEECCTTSCHHHHHHH
T ss_pred CCCceEEECCCCCCHHHHHHH
Confidence 457889999999999987754
No 392
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=21.96 E-value=44 Score=29.89 Aligned_cols=22 Identities=9% Similarity=0.078 Sum_probs=18.2
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
-+.+.|.|-.|+|||.+..+.-
T Consensus 63 G~ii~I~G~pGsGKTtLal~la 84 (356)
T 1u94_A 63 GRIVEIYGPESSGKTTLTLQVI 84 (356)
T ss_dssp TSEEEEECSTTSSHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHH
Confidence 4689999999999999975543
No 393
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=21.78 E-value=24 Score=32.99 Aligned_cols=22 Identities=9% Similarity=0.092 Sum_probs=18.8
Q ss_pred CceEeecCCcccchhhHhhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+.+..|.|-+|+|||.+|....
T Consensus 60 ~g~n~i~G~NGaGKS~lleAl~ 81 (517)
T 4ad8_A 60 GGFCAFTGETGAGKSIIVDALG 81 (517)
T ss_dssp CSEEEEEESHHHHHHHHTHHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHH
Confidence 3488999999999999998764
No 394
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=21.75 E-value=1e+02 Score=27.48 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=21.3
Q ss_pred CCChHHHHHhhh---cCCCCCeEEEEcCCCh-hHHHH
Q 025953 121 KQNPEFVQSVKS---QFSPESKLLVVCQEGL-RYIRF 153 (245)
Q Consensus 121 ~~~~~f~~~l~~---~l~~d~~VVVyC~~G~-RS~~a 153 (245)
.|.++.++.+.+ .++++..|+|.|..|. |+..+
T Consensus 194 aP~~e~id~fl~~v~~l~~~~~i~vHC~aG~GRTgt~ 230 (314)
T 3mmj_A 194 WPTPENIDRFLAFYRTLPQDAWLHFHSEAGVGRTTAF 230 (314)
T ss_dssp CCCHHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCCCEEEECCCCCchHHHH
Confidence 455555554433 2677789999999664 66554
No 395
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=21.67 E-value=32 Score=32.85 Aligned_cols=23 Identities=13% Similarity=-0.090 Sum_probs=19.3
Q ss_pred ceEeecCCcccchhhHhhhhhhh
Q 025953 213 DFVDLNPCVTVGEIEFLKNCQHA 235 (245)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
..|-|.|-+|+|||++++..-..
T Consensus 61 ~~vll~Gp~GtGKTtlar~ia~~ 83 (604)
T 3k1j_A 61 RHVLLIGEPGTGKSMLGQAMAEL 83 (604)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHT
T ss_pred CEEEEEeCCCCCHHHHHHHHhcc
Confidence 58899999999999999876443
No 396
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=21.36 E-value=27 Score=27.33 Aligned_cols=16 Identities=6% Similarity=-0.076 Sum_probs=13.4
Q ss_pred eEeecCCcccchhhHh
Q 025953 214 FVDLNPCVTVGEIEFL 229 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~ 229 (245)
-+.+.+-||+|||.+.
T Consensus 50 ~~li~~~tGsGKT~~~ 65 (216)
T 3b6e_A 50 NIIICLPTGSGKTRVA 65 (216)
T ss_dssp CEEEECSCHHHHHHHH
T ss_pred CEEEEcCCCCCHHHHH
Confidence 4778899999999864
No 397
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=20.97 E-value=34 Score=31.33 Aligned_cols=21 Identities=14% Similarity=0.009 Sum_probs=17.3
Q ss_pred eEeecCCcccchhhHhhhhhh
Q 025953 214 FVDLNPCVTVGEIEFLKNCQH 234 (245)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (245)
=|.+-|.++||||++++....
T Consensus 197 ki~ivG~~~vGKSslin~l~~ 217 (456)
T 4dcu_A 197 QFCLIGRPNVGKSSLVNAMLG 217 (456)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred eeEEecCCCCCHHHHHHHHhC
Confidence 366779999999999997653
No 398
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=20.89 E-value=34 Score=35.26 Aligned_cols=26 Identities=4% Similarity=0.019 Sum_probs=21.3
Q ss_pred ccccCCceEeecCCcccchhhHhhhh
Q 025953 207 LVLKIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
|-+..-+.|-|-|-+|+|||++|+-.
T Consensus 694 l~I~~GeivaIiGpNGSGKSTLLklL 719 (986)
T 2iw3_A 694 FQCSLSSRIAVIGPNGAGKSTLINVL 719 (986)
T ss_dssp EEEETTCEEEECSCCCHHHHHHHHHH
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 44555678899999999999999865
No 399
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=20.88 E-value=36 Score=32.93 Aligned_cols=25 Identities=16% Similarity=0.068 Sum_probs=21.1
Q ss_pred ccCCceEeecCCcccchhhHhhhhh
Q 025953 209 LKIPDFVDLNPCVTVGEIEFLKNCQ 233 (245)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (245)
+..-+++-|-|-+|+|||++|+..-
T Consensus 100 ~~~Gei~~LvGpNGaGKSTLLkiL~ 124 (608)
T 3j16_B 100 PRPGQVLGLVGTNGIGKSTALKILA 124 (608)
T ss_dssp CCTTSEEEEECCTTSSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCChHHHHHHHHh
Confidence 3456899999999999999998653
No 400
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=20.54 E-value=43 Score=30.11 Aligned_cols=21 Identities=5% Similarity=-0.010 Sum_probs=17.8
Q ss_pred CceEeecCCcccchhhHhhhh
Q 025953 212 PDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~ 232 (245)
-+.+.|+|-.|+|||.+..+.
T Consensus 74 G~li~I~G~pGsGKTtlal~l 94 (366)
T 1xp8_A 74 GRITEIYGPESGGKTTLALAI 94 (366)
T ss_dssp TSEEEEEESTTSSHHHHHHHH
T ss_pred CcEEEEEcCCCCChHHHHHHH
Confidence 468999999999999997654
No 401
>3vkw_A Replicase large subunit; alpha/beta domain, helicase, transferase; 1.90A {Tomato mosaic virus}
Probab=20.32 E-value=44 Score=31.24 Aligned_cols=25 Identities=8% Similarity=0.026 Sum_probs=20.4
Q ss_pred cccCCceEeecCCcccchhhHhhhh
Q 025953 208 VLKIPDFVDLNPCVTVGEIEFLKNC 232 (245)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (245)
.....++..++|..|+|||..|.+.
T Consensus 157 ~~~~~~v~~I~G~aGsGKTt~I~~~ 181 (446)
T 3vkw_A 157 HVSSAKVVLVDGVPGCGKTKEILSR 181 (446)
T ss_dssp CCCCSEEEEEEECTTSCHHHHHHHH
T ss_pred ccccccEEEEEcCCCCCHHHHHHHH
Confidence 3455678899999999999999654
Done!