BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025959
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana
GN=FLA6 PE=2 SV=2
Length = 247
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/255 (52%), Positives = 169/255 (66%), Gaps = 22/255 (8%)
Query: 1 MAAASASHILLTLAPLVLLLVLPQIQAQAPAPA-----GPVNLTGILDKNGQFTTFIKLL 55
M+++ S+++L L+ L +P IQ+Q APA P+NLT IL+ QFTT I+LL
Sbjct: 1 MSSSLFSYVVL----LIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLL 56
Query: 56 ISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYR 115
+TQV Q+ Q+NSS +GMT+FAPTDNAFN L+ G LN+L Q+Q+QL+LYH+ K+Y
Sbjct: 57 NTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYS 116
Query: 116 QSDLLLVSNPVRTLASGQD--VWGLNFTGQG--NQVNVSSGVVETPINSVLRQNFPLAVY 171
SDLLL SNPVRT A+GQD V+GLNFTGQ NQVNVS+GVVET IN+ LRQ FPLAVY
Sbjct: 117 LSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVY 176
Query: 172 QVDKVLLPEELSAAK-SPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRL-NAG 229
VD VLLPEEL K +P+ APAP+ S+ A PA D+ AG +
Sbjct: 177 VVDSVLLPEELFGTKTTPTGAPAPK-------SSTSSSDADSPAADDEHKSAGSSVKRTS 229
Query: 230 LGFVVGLALLCMGVL 244
LG VV AL C V+
Sbjct: 230 LGIVVSFALFCCSVI 244
>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana
GN=FLA9 PE=1 SV=1
Length = 247
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 150/216 (69%), Gaps = 14/216 (6%)
Query: 36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
+NLT IL+K GQFTTFI LL TQV +Q+ Q+NSSSEGMTVFAPTDNAF NL+ G LN
Sbjct: 38 INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQ 97
Query: 96 LDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD--VWGLNFTGQGNQVNVSSGV 153
L QV+L+LYHV+ K+Y DLL VSNPVRT ASG+D V+GLNFTGQ NQ+NVS+G
Sbjct: 98 LSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGY 157
Query: 154 VETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPS-AAPAPEGKK----PTEGSNKKVP 208
VET I++ LRQ PLAVY VD VLLP E+ S APAP+ K GS KK
Sbjct: 158 VETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAPKSKSGGVTDDSGSTKK-- 215
Query: 209 AASEPAPADDKTGAGGRLNAGLGFVVGLALLCMGVL 244
A+ P+ DK+G+G + GLGF +GL +LC+ L
Sbjct: 216 -AASPS---DKSGSGEK-KVGLGFGLGLIVLCLKFL 246
>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana
GN=FLA13 PE=1 SV=1
Length = 247
Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 149/213 (69%), Gaps = 5/213 (2%)
Query: 36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
+N+T IL+K GQF T I+LL +TQ+ NQI QINSSSEGMTV APTDNAF NL+ G LN
Sbjct: 35 INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNK 94
Query: 96 LDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD---VWGLNFTGQGNQVNVSSG 152
L QV+L+LYHV+ KFY DLL VSNPVRT ASG+D V+GLNFTGQGNQVNVS+G
Sbjct: 95 LSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTG 154
Query: 153 VVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPS-AAPAPEGKKPTEGSNKKVPAAS 211
VVET +++ LRQ PLAVY VD VLLPEE+ + S AP P+ K P + S+ +
Sbjct: 155 VVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSP-DVSDDSESSKK 213
Query: 212 EPAPADDKTGAGGRLNAGLGFVVGLALLCMGVL 244
AP++ + G +N GLG +GL +LC+ L
Sbjct: 214 AAAPSESEKSGSGEMNTGLGLGLGLVVLCLKFL 246
>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana
GN=FLA11 PE=2 SV=2
Length = 246
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 129/196 (65%), Gaps = 4/196 (2%)
Query: 3 AASASHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVAN 62
A S + I L L++ QA AP P+GP N+T IL+K GQFT FI+LL STQ ++
Sbjct: 2 ATSRTFIFSNLFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASD 61
Query: 63 QIQSQINSSSE-GMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLL 121
QI +Q+NSSS G+TVFAPTDNAFN+L+ G LN+L +Q++VQLV +HV
Sbjct: 62 QINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQT 121
Query: 122 VSNPVRTLA-SGQD-VWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
VSNP+RT A GQ+ + LN T GNQVN+++GVV + + + + LAVYQVD+VLLP
Sbjct: 122 VSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLP 181
Query: 180 EELSAAKSPSAAPAPE 195
+ + S + APAPE
Sbjct: 182 LAMFGS-SVAPAPAPE 196
>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana
GN=FLA12 PE=2 SV=2
Length = 249
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 104/150 (69%), Gaps = 2/150 (1%)
Query: 35 PVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLN 94
P N+T IL+K GQFT FI+LL ST VANQ+ Q+N+S G+T+FAP+D++F L+ G LN
Sbjct: 37 PTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLN 96
Query: 95 NLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLA--SGQDVWGLNFTGQGNQVNVSSG 152
+L +++QV+L+ +HV + S+ +SNP+RT A S + LN T GN VN++SG
Sbjct: 97 SLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSG 156
Query: 153 VVETPINSVLRQNFPLAVYQVDKVLLPEEL 182
V T ++ + + LAVYQVDKVLLP+++
Sbjct: 157 VTNTTVSGNVYSDGQLAVYQVDKVLLPQQV 186
>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana
GN=FLA7 PE=1 SV=1
Length = 254
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
Query: 36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
VNLT +L G F TF+ L+ST V Q+Q N++ EG+T+F P D+AF + L+N
Sbjct: 45 VNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSN 104
Query: 96 LDNQKQVQLVLYHVTSKFYRQSDL--LLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGV 153
L + QLVL+H +Y S+ L S PV T A GQ + L FT V + S
Sbjct: 105 LTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQ--YSLKFTDVSGTVRIDSLW 162
Query: 154 VETPINSVLRQNFPLAVYQVDKVLLPEEL 182
T ++S + P+AVYQV++VLLPE +
Sbjct: 163 TRTKVSSSVFSTDPVAVYQVNRVLLPEAI 191
>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana
GN=FLA10 PE=1 SV=1
Length = 422
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 6/172 (3%)
Query: 25 IQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNA 84
+ A AP+ AG N+TG+L+K G TF LL+S+ V +S + +G+TVFAP+D A
Sbjct: 178 LTAPAPSSAGVSNITGLLEKAG-CKTFANLLVSSGVIKTFESTVE---KGLTVFAPSDEA 233
Query: 85 FNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQDVWGLNFTGQ 143
F L NL + V L+ YH +++ + L + + TLA+ G + L +
Sbjct: 234 FKARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTS 293
Query: 144 GNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAPE 195
G++V + +GV + + + P+ ++ VD VLLP EL KS S APAPE
Sbjct: 294 GDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAEL-FGKSSSPAPAPE 344
>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana
GN=FLA4 PE=1 SV=1
Length = 420
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 23 PQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTD 82
P + +P PAG +NLT IL F + LL+++ V + ++ + G+TVF PTD
Sbjct: 194 PTSTSLSPPPAG-INLTQILINGHNFNVALSLLVASGVITEFEN--DERGAGITVFVPTD 250
Query: 83 NAFNNLEKGL-LNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVR-TLAS---GQDVWG 137
+AF++L + L +L +++ ++ +HV +Y L ++NPV+ TLA+ G +
Sbjct: 251 SAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYT 310
Query: 138 LNFTG-QGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAP 194
LN + G+ V ++SGVV + P++V+ V KVLLP+EL A AP
Sbjct: 311 LNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSGQPVATAP 368
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
+N+T +L ++F LL+S+ +A ++ S +T+ A ++ F++ L
Sbjct: 29 INVTAVLSSFPNLSSFSNLLVSSGIAAEL-----SGRNSLTLLAVPNSQFSSASLDLTRR 83
Query: 96 LDNQKQVQLVLYHVTSKFYRQSDLLLV---SNPVRTL--ASGQDVWG---LNFTGQGNQV 147
L L+ +HV +F SDL + + V TL ASG+ +G +N T
Sbjct: 84 LPPSALADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASG 143
Query: 148 NVSSGVVETPINSVLR--QNFP--LAVYQVDKVLLPEELSAAKSPSAAPAP 194
+V+ G T +VL+ + P + V VD +++P + S + P P
Sbjct: 144 SVTIGSPATKNVTVLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPP 194
>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana
GN=FLA8 PE=1 SV=1
Length = 420
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 29 APAPAGPV-NLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNN 87
APAP+ + N+TG+L+K G TF LL+S+ V +S + +G+TVFAP+D AF
Sbjct: 180 APAPSASLSNITGLLEKAG-CKTFANLLVSSGVLKTYESAVE---KGLTVFAPSDEAFKA 235
Query: 88 LEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQDVWGLNFTGQGNQ 146
L L + V L+ YH +++ + L N + TLA+ G + L + G++
Sbjct: 236 EGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDE 295
Query: 147 VNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEEL 182
V + +GV + + + P+ ++ VD VLLP EL
Sbjct: 296 VILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAEL 331
>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana
GN=FLA2 PE=1 SV=1
Length = 403
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 19 LLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVF 78
+L P+ +A +P+ + LT IL+K G F +L ST Q ++ G+TVF
Sbjct: 173 VLTSPEAEAPTASPSDLI-LTTILEKQG-CKAFSDILKSTGADKTFQDTVDG---GLTVF 227
Query: 79 APTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSN-PVRTLAS-GQDVW 136
P+D+A +L + LVLYH Y+ +L N V TLA+ G + +
Sbjct: 228 CPSDSAVGKFMPKF-KSLSPANKTALVLYH-GMPVYQSLQMLRSGNGAVNTLATEGNNKF 285
Query: 137 GLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAA-------KSPS 189
G V + + VV + L+ PL VY++DKVLLP E+ A S
Sbjct: 286 DFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAPAPKSS 345
Query: 190 AAPAPEGKKPTEGSNKKVPAASEPAPADDKTGA-GGRLNAGLGFVVGLALLCMGV 243
+ +G + P+ + ADDK GA + V + LC GV
Sbjct: 346 KKKPKNAEADADGPSADAPSDDDVEVADDKNGAVSAMITRTSNVVTAIVGLCFGV 400
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 29/173 (16%)
Query: 37 NLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL 96
N+T IL K+ F+TF L +T +A++I + + +TV A ++A ++ +L+N
Sbjct: 28 NITRILAKDPDFSTFNHYLSATHLADEINRR-----QTITVLAVDNSAMSS----ILSNG 78
Query: 97 DNQKQVQLVL-YHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVS----- 150
+ Q++ +L HV ++ L +++ + AS G + TG +N++
Sbjct: 79 YSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTG-SATGTSGYINITDIKGG 137
Query: 151 ----------SGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPA 193
S + + SV + + ++V + +VL E A++P+A+P+
Sbjct: 138 KVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPE---AEAPTASPS 187
>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana
GN=FLA1 PE=1 SV=1
Length = 424
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLL-- 93
+NLTGI+ +G F + L++ A++ + S GMTVF P D+A KG L
Sbjct: 185 MNLTGIMSAHG-CKVFAETLLTNPGASKTYQE--SLEGGMTVFCPGDDAM----KGFLPK 237
Query: 94 -NNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQDVWGLNFTGQGNQVNVSS 151
NL K+ + + +Y + L + P+ TLA+ G + + L G +V + +
Sbjct: 238 YKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGANKFELTVQNDGEKVTLKT 297
Query: 152 GVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKS 187
+ I L PLA+Y DKVLLP+EL A +
Sbjct: 298 RINTVKIVDTLIDEQPLAIYATDKVLLPKELFKASA 333
>sp|P73392|Y1735_SYNY3 Uncharacterized protein sll1735 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1735 PE=4 SV=1
Length = 133
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 37 NLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL 96
N+ I + +F+T + + + + + +QS TVFAPTD AF L G + L
Sbjct: 3 NIVEIAVSDERFSTLVTAVTAANLVDVLQS-----PGPFTVFAPTDTAFAKLPPGTITTL 57
Query: 97 -DNQKQVQLVL-YHVTSKFYRQSDLLLVSN 124
N Q+ +L YHV + + Q+DL +S
Sbjct: 58 VQNIPQLARILTYHVVAGKFTQADLCRLST 87
>sp|P0A668|MP70_MYCTU Immunogenic protein MPT70 OS=Mycobacterium tuberculosis GN=mpt70
PE=1 SV=1
Length = 193
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 20 LVLPQIQAQAPA-PAGPVNLTGI--------LDKNGQFTTFIKLLISTQVANQIQSQINS 70
LV P A A P GP ++ G+ N + TT L S Q+ Q+
Sbjct: 33 LVGPGCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTAAL-SGQLNPQVNLVDTL 91
Query: 71 SSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQV--QLVLYHVTSKFYRQSDLLLVSNPVRT 128
+S TVFAPT+ AF+ L ++ L + ++ YHV + ++P
Sbjct: 92 NSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG---------QTSPANV 142
Query: 129 LASGQDVWG--LNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
+ + Q + G + TGQGN + V G + V N VY +D VL+P
Sbjct: 143 VGTRQTLQGASVTVTGQGNSLKV--GNADVVCGGVSTAN--ATVYMIDSVLMP 191
>sp|P0A669|MP70_MYCBO Immunogenic protein MPB70 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mpb70 PE=1 SV=1
Length = 193
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 20 LVLPQIQAQAPA-PAGPVNLTGI--------LDKNGQFTTFIKLLISTQVANQIQSQINS 70
LV P A A P GP ++ G+ N + TT L S Q+ Q+
Sbjct: 33 LVGPGCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTAAL-SGQLNPQVNLVDTL 91
Query: 71 SSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQV--QLVLYHVTSKFYRQSDLLLVSNPVRT 128
+S TVFAPT+ AF+ L ++ L + ++ YHV + ++P
Sbjct: 92 NSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG---------QTSPANV 142
Query: 129 LASGQDVWG--LNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
+ + Q + G + TGQGN + V G + V N VY +D VL+P
Sbjct: 143 VGTRQTLQGASVTVTGQGNSLKV--GNADVVCGGVSTAN--ATVYMIDSVLMP 191
>sp|P74615|Y1483_SYNY3 Uncharacterized protein sll1483 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1483 PE=4 SV=1
Length = 180
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 50 TFIKLLISTQVANQIQSQINSSSEG-MTVFAPTDNAFNNLEKGLLNNL----DNQKQVQL 104
TF L+ + + A+ +++ S+EG TVFAPT++AF L G + +L + K V++
Sbjct: 57 TFSTLVAAVKAADLVEAL---SAEGPFTVFAPTNDAFAALPAGTVESLLLPENKDKLVKI 113
Query: 105 VLYHV 109
+ YHV
Sbjct: 114 LTYHV 118
>sp|Q8R4U0|STAB2_MOUSE Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1
Length = 2559
Score = 37.0 bits (84), Expect = 0.14, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 47 QFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL----DNQKQV 102
++ F LL T V ++ E T+F P++ A +N+ G+L+ L ++K +
Sbjct: 534 RYGKFRSLLEKTNVGQALEK--GGIDEPYTIFVPSNEALSNMTAGVLDYLLSPEGSRKLL 591
Query: 103 QLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVL 162
+LV YH+ + + L+ + +R++A+ + N + +G + + V ET + +
Sbjct: 592 ELVRYHIVAFTQLEVATLVSTLHIRSMAN--QIITFNISSKGQILANNVAVDETEVAAKN 649
Query: 163 RQNFPLAVYQVDKVLLPEEL 182
+ +Y + VL+P +
Sbjct: 650 GR-----IYTLTGVLIPPSI 664
>sp|Q9ZQ23|FLA3_ARATH Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana
GN=FLA3 PE=2 SV=1
Length = 280
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
VN+T +L+K +F+T +LL T++ I + + +TV A NN G ++
Sbjct: 25 VNITRVLEKYPEFSTMTELLAKTELTPIINKR-----QTITVL-----ALNNDAIGSISG 74
Query: 96 LDNQKQVQLVLYHVTSKFYRQSDL-------LLVSNPVRTLASGQDVWG-LNFTGQGNQV 147
++ +++ HV ++ + L L++ ++ GQ G LN T ++
Sbjct: 75 RPEEEVKNILMNHVVLDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLNCTKSNGKI 134
Query: 148 NVSSGVVETP-----INSVLRQNFPLAVYQV 173
SGV P I +V R + L+V Q+
Sbjct: 135 YFGSGVKGAPQTAEYITTVFRNPYNLSVVQI 165
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3
Length = 2551
Score = 34.7 bits (78), Expect = 0.58, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 47 QFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL----DNQKQV 102
+++ F LL T + + + + T+F P + A NN++ G L+ L ++K +
Sbjct: 527 RYSKFRSLLEETNLGHALDE--DGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRKLL 584
Query: 103 QLVLYHVTSKFYRQSDLLLVSNP-VRTLAS 131
+LV YH+ F + L+S P +R++A+
Sbjct: 585 ELVRYHIVP-FTQLEVATLISTPHIRSMAN 613
>sp|A6X919|D19L1_MOUSE Protein dpy-19 homolog 1 OS=Mus musculus GN=Dpy19l1 PE=2 SV=1
Length = 746
Score = 34.3 bits (77), Expect = 0.78, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Query: 181 ELSAAKSPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRLNAGLGFVVGL 236
EL + ++P P+P G++ G +K P A APA D G GRL AGL + +GL
Sbjct: 37 ELGSERTP---PSP-GRRGAAG--RKGPRAGTAAPAPD--GLAGRLAAGLHWALGL 84
>sp|P10674|FAS1_DROME Fasciclin-1 OS=Drosophila melanogaster GN=Fas1 PE=1 SV=1
Length = 652
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Query: 42 LDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQ 101
L + + + F LL S Q+AN S T+F PT+ AF + +
Sbjct: 27 LRDDSELSQFYSLLESNQIANSTLSL-----RSCTIFVPTNEAFQRY----------KSK 71
Query: 102 VQLVLYHVTSKFYRQSDL 119
VLYH+T++ Y Q L
Sbjct: 72 TAHVLYHITTEAYTQKRL 89
>sp|Q69ZB0|LRCC1_MOUSE Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Mus musculus GN=Lrrcc1 PE=2 SV=2
Length = 1026
Score = 33.9 bits (76), Expect = 1.1, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 79 APTDNAFNNLEKGLLNNLDNQKQVQL-VLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWG 137
A N N LE +L D QK +Q+ +L H ++ S+L + + L + + VWG
Sbjct: 709 ANLQNQINTLE--ILIEDDKQKSIQIELLKHEKTQLI--SELAAKESLIYGLRTERKVWG 764
Query: 138 LNFTGQGNQVNVSSGVVETPINSVLRQN 165
Q + ++ S G +E I S+ R+N
Sbjct: 765 QELACQSSTLSQSRGKLEAQIESLCREN 792
>sp|O60306|AQR_HUMAN Intron-binding protein aquarius OS=Homo sapiens GN=AQR PE=1 SV=4
Length = 1485
Score = 33.5 bits (75), Expect = 1.6, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Query: 147 VNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAPEGKKPTEGSNKK 206
+ V + ++ +P ++ RQ P +Q D P E A +P A PA PT
Sbjct: 1411 MTVQADIIPSPTDTSCRQETP--AFQTDTT--PSETGATSTPEAIPALSETTPT-----V 1461
Query: 207 VPAASEPAPAD---DKTGA 222
V A S PA A+ D T A
Sbjct: 1462 VGAVSAPAEANTPQDATSA 1480
>sp|O33752|Y175_SYNP2 Uncharacterized protein SYNPCC7002_A0175 OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)
GN=SYNPCC7002_A0175 PE=4 SV=1
Length = 133
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 51 FIKLLISTQVANQIQSQINSSSEG-MTVFAPTDNAFNNLEKGLLNNL-DNQKQVQLVL-Y 107
F L+ + Q A +++ + EG TVFAP D+AF L G + L N Q+ +L Y
Sbjct: 14 FSTLVAAVQAAGLVETL---AGEGDFTVFAPNDDAFAKLPPGTIQTLVQNPPQLARILTY 70
Query: 108 HVTSKFYRQSDLL 120
HV + + DL+
Sbjct: 71 HVAAGRLTKDDLI 83
>sp|Q9C099|LRCC1_HUMAN Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Homo sapiens GN=LRRCC1 PE=1 SV=2
Length = 1032
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 79 APTDNAFNNLEKGLLNNLDNQKQVQL-VLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWG 137
A N N LE +L D QK +Q+ +L H K S+L + + L + + VWG
Sbjct: 715 ANLQNQINTLE--ILIEDDKQKSIQIELLKH--EKVQLISELAAKESLIFGLRTERKVWG 770
Query: 138 LNFTGQGNQVNVSSGVVETPINSVLRQN 165
QG+ + + G +E I S+ R+N
Sbjct: 771 HELAQQGSSLAQNRGKLEAQIESLSREN 798
>sp|Q95215|BGH3_RABIT Transforming growth factor-beta-induced protein ig-h3
OS=Oryctolagus cuniculus GN=TGFBI PE=2 SV=2
Length = 683
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 76 TVFAPTDNAFNNLEKGLLNN-LDNQKQVQLVL-YHVTSKFYRQSDLLLVSNPVRTLASGQ 133
TVFAPT+ AF L G LN L N K++ +L YHV + +LVS + TL +
Sbjct: 538 TVFAPTNEAFQALPPGELNKLLGNAKELADILKYHVGEE-------ILVSGGIGTLVRLK 590
Query: 134 DVWG--LNFTGQGNQVNVSSG-VVETPI---NSVLRQNFPLAVYQVDKVLLP 179
+ G L + + N V+V+ V E+ I N V VY + VL P
Sbjct: 591 SLQGDKLEVSSKNNAVSVNKEPVAESDIMATNGV--------VYAITSVLQP 634
>sp|Q9NY15|STAB1_HUMAN Stabilin-1 OS=Homo sapiens GN=STAB1 PE=1 SV=3
Length = 2570
Score = 32.3 bits (72), Expect = 3.2, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Query: 21 VLPQIQAQAPA--PAGPVNLTG-ILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTV 77
V+ ++ QAP+ P P G IL F+ F T + N I TV
Sbjct: 489 VVTGLRWQAPSGTPGDPKRTIGQILASTEAFSRF-----ETILENCGLPSILDGPGPFTV 543
Query: 78 FAPTDNAFNNLEKGLLNNLDN---QKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD 134
FAP++ A ++L G L L K +LV YH+ + + L+ + T+A+
Sbjct: 544 FAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKGRILTMAN--Q 601
Query: 135 VWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
V +N + +G + GV P+ V ++ +D +LLP
Sbjct: 602 VLAVNISEEGRILLGPEGV---PLQRVDVMAANGVIHMLDGILLP 643
>sp|P39526|LAA1_YEAST AP-1 accessory protein LAA1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=LAA1 PE=1 SV=1
Length = 2014
Score = 31.6 bits (70), Expect = 4.9, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 44 KNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPT-DNAFNNLEKGLLNNLDNQKQV 102
+N T + L +T + ++ Q++ + F + D N++ LL+N + QV
Sbjct: 639 RNHALTCLLTYLSNTTIDKEMAKQVSYLLTKCSNFNHSIDLKSKNIDNALLHNENRILQV 698
Query: 103 QLVLYHVTSKFYRQSDLLLV----SNPVRTLASGQDVWG-LNFTGQ---GNQVNVSSGVV 154
L L + + S L+L+ S+P S V G L G N+ ++ S +V
Sbjct: 699 YLKLEKYINSDFNSSLLILIVKNFSDPNLYTESSSSVLGSLKDIGNRKVSNKDDMESNIV 758
Query: 155 -ETPINSVLRQN 165
E+ IN++LRQN
Sbjct: 759 LESSINTLLRQN 770
>sp|P0A670|MP83_MYCTU Cell surface lipoprotein MPT83 OS=Mycobacterium tuberculosis
GN=mpt83 PE=4 SV=1
Length = 220
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 76 TVFAPTDNAFNNLEKGLLNNLDNQKQV--QLVLYHVTSKFYRQSDLLLVSNPVRTLASGQ 133
TVFAPT+ AF+ L ++ L ++ ++ YHV + ++P R + Q
Sbjct: 123 TVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQ---------ASPSRIDGTHQ 173
Query: 134 DVWGLNFTGQGNQVNV---SSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
+ G + T G + ++ ++G+V V N VY +D VL+P
Sbjct: 174 TLQGADLTVIGARDDLMVNNAGLV---CGGVHTAN--ATVYMIDTVLMP 217
>sp|C1AFY9|MP83_MYCBT Cell surface lipoprotein MPB83 OS=Mycobacterium bovis (strain BCG /
Tokyo 172 / ATCC 35737 / TMC 1019) GN=mpb83 PE=1 SV=1
Length = 220
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 76 TVFAPTDNAFNNLEKGLLNNLDNQKQV--QLVLYHVTSKFYRQSDLLLVSNPVRTLASGQ 133
TVFAPT+ AF+ L ++ L ++ ++ YHV + ++P R + Q
Sbjct: 123 TVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQ---------ASPSRIDGTHQ 173
Query: 134 DVWGLNFTGQGNQVNV---SSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
+ G + T G + ++ ++G+V V N VY +D VL+P
Sbjct: 174 TLQGADLTVIGARDDLMVNNAGLV---CGGVHTAN--ATVYMIDTVLMP 217
>sp|P0CAX7|MP83_MYCBO Cell surface lipoprotein MPB83 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mpb83 PE=4 SV=1
Length = 220
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 76 TVFAPTDNAFNNLEKGLLNNLDNQKQV--QLVLYHVTSKFYRQSDLLLVSNPVRTLASGQ 133
TVFAPT+ AF+ L ++ L ++ ++ YHV + ++P R + Q
Sbjct: 123 TVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQ---------ASPSRIDGTHQ 173
Query: 134 DVWGLNFTGQGNQVNV---SSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
+ G + T G + ++ ++G+V V N VY +D VL+P
Sbjct: 174 TLQGADLTVIGARDDLMVNNAGLV---CGGVHTAN--ATVYMIDTVLMP 217
>sp|O11780|BGH3_PIG Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa
GN=TGFBI PE=1 SV=1
Length = 683
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 73 EGM-TVFAPTDNAFNNLEKGLLNN-LDNQKQVQLVL-YHVTSKFYRQSDLLLVSNPVRTL 129
EG+ TVFAPT+ AF L G N L N K++ +L YHV D +LVS + L
Sbjct: 534 EGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV-------GDEILVSGGIGAL 586
Query: 130 ASGQDVWG--LNFTGQGNQVNV------------SSGVVETPINSVLR 163
+ + G L + + + V V ++GVV T IN+VLR
Sbjct: 587 VRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHT-INTVLR 633
>sp|Q62009|POSTN_MOUSE Periostin OS=Mus musculus GN=Postn PE=1 SV=2
Length = 838
Score = 31.2 bits (69), Expect = 6.9, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 42 LDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNL---EKGLLNNLDN 98
L ++ +F+ F+ LL + + + + + T+FAPT++AF + E+ LL N
Sbjct: 505 LRQDKRFSIFLSLLEAADLKDLL-----TQPGDWTLFAPTNDAFKGMTSEERELLIGDKN 559
Query: 99 QKQVQLVLYHVTSKFY 114
Q ++LYH+T Y
Sbjct: 560 ALQ-NIILYHLTPGVY 574
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,807,531
Number of Sequences: 539616
Number of extensions: 3882380
Number of successful extensions: 12630
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 12463
Number of HSP's gapped (non-prelim): 199
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)