Query 025960
Match_columns 245
No_of_seqs 181 out of 1594
Neff 7.8
Searched_HMMs 13730
Date Mon Mar 25 21:32:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025960.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025960hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ayja1 g.41.8.7 (A:1-56) Ribo 88.4 0.14 1E-05 31.1 2.5 26 121-146 16-41 (56)
2 d1joca1 g.50.1.1 (A:1348-1411) 79.6 0.39 2.9E-05 30.0 1.8 26 124-149 8-35 (64)
3 d1wfka_ g.50.1.1 (A:) Zinc fin 77.1 0.59 4.3E-05 31.1 2.2 28 121-148 6-35 (88)
4 d1vfya_ g.50.1.1 (A:) vps27p p 75.9 0.48 3.5E-05 29.9 1.3 24 126-149 7-32 (67)
5 d1dvpa2 g.50.1.1 (A:149-220) H 72.9 0.76 5.5E-05 29.3 1.8 25 125-149 14-40 (72)
6 d2dkta2 g.93.1.1 (A:82-137) RI 66.2 0.49 3.6E-05 28.8 -0.3 16 135-150 31-46 (56)
7 d2c6aa1 g.41.11.1 (A:290-335) 64.0 1.4 0.0001 25.4 1.4 21 124-144 13-33 (46)
8 d2cr8a1 g.41.11.1 (A:8-48) MDM 57.1 2.3 0.00016 23.8 1.4 20 125-144 5-24 (41)
9 d2pg3a1 c.26.2.1 (A:1-230) Que 56.9 1.2 8.5E-05 34.1 0.2 21 128-150 186-206 (230)
10 d1olza3 g.16.2.1 (A:481-536) S 56.4 0.83 6.1E-05 27.7 -0.6 23 142-164 6-31 (56)
11 d2dmda2 g.37.1.1 (A:8-33) Zinc 54.0 1.3 9.5E-05 21.9 0.1 14 139-152 2-15 (26)
12 d1twfi1 g.41.3.1 (I:1-49) RBP9 53.8 2.4 0.00017 24.8 1.2 33 123-156 3-43 (49)
13 d1njqa_ g.37.1.3 (A:) SUPERMAN 52.9 2.2 0.00016 23.5 0.9 13 135-147 2-14 (37)
14 d1zbdb_ g.50.1.1 (B:) Effector 47.8 4.4 0.00032 28.1 2.2 26 123-148 47-75 (124)
15 d1y02a2 g.50.1.1 (A:20-70) Rif 46.0 2.4 0.00017 25.0 0.3 12 136-147 14-25 (51)
16 d2adra2 g.37.1.1 (A:131-161) A 41.2 2.4 0.00017 22.1 -0.2 14 139-152 2-15 (31)
17 d1q5wa_ g.41.11.1 (A:) Npl4 {R 37.9 7.4 0.00054 20.0 1.5 21 125-145 7-27 (31)
18 d1lpva_ g.62.1.1 (A:) DM domai 31.7 6.8 0.0005 23.1 0.8 25 135-159 7-33 (52)
19 d1wila_ g.50.1.3 (A:) Hypothet 27.6 26 0.0019 22.5 3.2 24 124-147 15-38 (89)
20 d2j0151 g.41.8.5 (5:2-60) Ribo 27.5 16 0.0011 21.9 2.0 23 122-146 27-50 (59)
21 d2gnra1 b.40.4.15 (A:8-144) Hy 27.5 8.1 0.00059 27.2 0.7 26 122-147 37-62 (137)
22 d1shyb2 g.16.2.1 (B:516-564) H 24.3 6.2 0.00045 22.9 -0.4 18 142-159 9-27 (49)
23 d2dlqa2 g.37.1.1 (A:35-62) GLI 24.1 12 0.0009 18.4 0.8 12 140-151 3-14 (28)
24 d1ubdc2 g.37.1.1 (C:323-350) Y 23.2 12 0.00089 18.5 0.7 11 137-147 1-11 (28)
No 1
>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}
Probab=88.42 E-value=0.14 Score=31.11 Aligned_cols=26 Identities=35% Similarity=0.729 Sum_probs=22.5
Q ss_pred CcCceeccccccccCCCCccCcccCc
Q 025960 121 NPRIRYCRKCNQLKPPRCHHCSVCGR 146 (245)
Q Consensus 121 ~~~~~~C~~C~~~kP~Rs~HC~~C~~ 146 (245)
....+.|.+|...-|+|+..|+.||.
T Consensus 16 ~~~k~ICrkC~AR~p~rAt~CRKCg~ 41 (56)
T d2ayja1 16 VFLKKVCRKCGALNPIRATKCRRCHS 41 (56)
T ss_dssp SCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred hhhhHHHhhccccCCccccccccCCC
Confidence 33568899999999999999998875
No 2
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.63 E-value=0.39 Score=29.98 Aligned_cols=26 Identities=31% Similarity=0.790 Sum_probs=17.7
Q ss_pred ceecccccc--ccCCCCccCcccCcccc
Q 025960 124 IRYCRKCNQ--LKPPRCHHCSVCGRCIL 149 (245)
Q Consensus 124 ~~~C~~C~~--~kP~Rs~HC~~C~~CV~ 149 (245)
...|..|+. ---.|-|||+.||+-+=
T Consensus 8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C 35 (64)
T d1joca1 8 VQNCMACGKGFSVTVRRHHCRQCGNIFC 35 (64)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEEC
T ss_pred CCcCcCcCCcccCCccccchhhhCCeec
Confidence 356777764 22357899999998653
No 3
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.09 E-value=0.59 Score=31.14 Aligned_cols=28 Identities=21% Similarity=0.396 Sum_probs=19.8
Q ss_pred CcCceecccccc--ccCCCCccCcccCccc
Q 025960 121 NPRIRYCRKCNQ--LKPPRCHHCSVCGRCI 148 (245)
Q Consensus 121 ~~~~~~C~~C~~--~kP~Rs~HC~~C~~CV 148 (245)
......|..|+. ---.|-|||+.||+.+
T Consensus 6 ~~~~s~C~~C~~~Fs~~~rrhhCr~CG~vf 35 (88)
T d1wfka_ 6 SGMESRCYGCAVKFTLFKKEYGCKNCGRAF 35 (88)
T ss_dssp CCCCSBCTTTCCBCCSSSCEEECSSSCCEE
T ss_pred CcccCcCcccCchhccccccccccccChhh
Confidence 344567888875 2245789999998854
No 4
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.89 E-value=0.48 Score=29.86 Aligned_cols=24 Identities=33% Similarity=0.733 Sum_probs=17.2
Q ss_pred ecccccc--ccCCCCccCcccCcccc
Q 025960 126 YCRKCNQ--LKPPRCHHCSVCGRCIL 149 (245)
Q Consensus 126 ~C~~C~~--~kP~Rs~HC~~C~~CV~ 149 (245)
.|..|+. -.-.|-|||+.||+-+=
T Consensus 7 ~C~~C~~~F~~~~rkhhCr~CG~~fC 32 (67)
T d1vfya_ 7 ACMICSKKFSLLNRKHHCRSCGGVFC 32 (67)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEEC
T ss_pred ccccCCCcccCcccccccccCCCEec
Confidence 4777764 23468899999998654
No 5
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=72.88 E-value=0.76 Score=29.33 Aligned_cols=25 Identities=36% Similarity=0.871 Sum_probs=17.9
Q ss_pred eecccccc--ccCCCCccCcccCcccc
Q 025960 125 RYCRKCNQ--LKPPRCHHCSVCGRCIL 149 (245)
Q Consensus 125 ~~C~~C~~--~kP~Rs~HC~~C~~CV~ 149 (245)
+.|..|+. ---.|-|||+.||+.+-
T Consensus 14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C 40 (72)
T d1dvpa2 14 RVCHRCRVEFTFTNRKHHCRNCGQVFC 40 (72)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEEC
T ss_pred CccccCCCcccCccccccccccCCeeC
Confidence 35888875 23368899999988654
No 6
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.19 E-value=0.49 Score=28.79 Aligned_cols=16 Identities=25% Similarity=0.712 Sum_probs=9.6
Q ss_pred CCCCccCcccCccccc
Q 025960 135 PPRCHHCSVCGRCILK 150 (245)
Q Consensus 135 P~Rs~HC~~C~~CV~~ 150 (245)
.+.-.||..||.|+..
T Consensus 31 ~~~ffHC~~C~~C~~~ 46 (56)
T d2dkta2 31 KEDFFHCLKCNLCLTT 46 (56)
T ss_dssp GGGEEEETTTTEEEEG
T ss_pred CccccccCccccccCc
Confidence 4445667777776644
No 7
>d2c6aa1 g.41.11.1 (A:290-335) MDM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.05 E-value=1.4 Score=25.40 Aligned_cols=21 Identities=38% Similarity=1.034 Sum_probs=17.7
Q ss_pred ceeccccccccCCCCccCccc
Q 025960 124 IRYCRKCNQLKPPRCHHCSVC 144 (245)
Q Consensus 124 ~~~C~~C~~~kP~Rs~HC~~C 144 (245)
.=.|.+|+..-||-..||..|
T Consensus 13 ~WkC~~C~~~N~Pl~ryC~rC 33 (46)
T d2c6aa1 13 YWKCTSCNEMNPPLPSHCNRC 33 (46)
T ss_dssp CEECTTTCCEECSSCSSCTTT
T ss_pred hccCccccccCCcchhHhHHH
Confidence 346999999999999998766
No 8
>d2cr8a1 g.41.11.1 (A:8-48) MDM4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.05 E-value=2.3 Score=23.81 Aligned_cols=20 Identities=25% Similarity=0.790 Sum_probs=15.5
Q ss_pred eeccccccccCCCCccCccc
Q 025960 125 RYCRKCNQLKPPRCHHCSVC 144 (245)
Q Consensus 125 ~~C~~C~~~kP~Rs~HC~~C 144 (245)
=.|.+|+..-||-..||..|
T Consensus 5 WkC~~C~~~N~Pl~ryC~rC 24 (41)
T d2cr8a1 5 WQCTECKKFNSPSKRYCFRC 24 (41)
T ss_dssp EECSSSCCEECSSCCBCTTT
T ss_pred eecCcccccCCcchhHHHHH
Confidence 35888888888888887765
No 9
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=56.89 E-value=1.2 Score=34.11 Aligned_cols=21 Identities=24% Similarity=0.691 Sum_probs=17.6
Q ss_pred cccccccCCCCccCcccCccccc
Q 025960 128 RKCNQLKPPRCHHCSVCGRCILK 150 (245)
Q Consensus 128 ~~C~~~kP~Rs~HC~~C~~CV~~ 150 (245)
..| ++|.|.+||..|..|+.|
T Consensus 186 ~SC--y~~~~~~~CG~C~~C~~R 206 (230)
T d2pg3a1 186 LTC--YNGIKGDGCGQCAACHLR 206 (230)
T ss_dssp CCC--TTSCCTTTTSCSHHHHHH
T ss_pred CCC--CCCCCCCCCCCCHhHHHH
Confidence 445 578888999999999987
No 10
>d1olza3 g.16.2.1 (A:481-536) Semaphorin 4d {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.38 E-value=0.83 Score=27.68 Aligned_cols=23 Identities=35% Similarity=0.989 Sum_probs=18.7
Q ss_pred cccCcccccCCcccccc---cceecc
Q 025960 142 SVCGRCILKMDHHCVWV---VNCVGA 164 (245)
Q Consensus 142 ~~C~~CV~~~DHhCpwi---~nCIG~ 164 (245)
+.|+.||.-.|-||.|= +.|+-.
T Consensus 6 ~sC~~C~~a~DPyCgW~~~~~~C~~~ 31 (56)
T d1olza3 6 GTCEDCVLARDPYCAWSPPTATCVAL 31 (56)
T ss_dssp CSHHHHHHTTCTTEEEETTTTEEEET
T ss_pred ccHHHHHcCCCCcCcccCCCCCeecC
Confidence 46889999999999995 668754
No 11
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.00 E-value=1.3 Score=21.87 Aligned_cols=14 Identities=50% Similarity=1.400 Sum_probs=11.4
Q ss_pred ccCcccCcccccCC
Q 025960 139 HHCSVCGRCILKMD 152 (245)
Q Consensus 139 ~HC~~C~~CV~~~D 152 (245)
|.|..|++|-.|-|
T Consensus 2 hkc~~c~kcfsrkd 15 (26)
T d2dmda2 2 HKCEVCGKCFSRKD 15 (26)
T ss_dssp CCBTTTTBCCCCHH
T ss_pred CccchhhhHhcchh
Confidence 67889999987766
No 12
>d1twfi1 g.41.3.1 (I:1-49) RBP9 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.80 E-value=2.4 Score=24.81 Aligned_cols=33 Identities=24% Similarity=0.658 Sum_probs=19.9
Q ss_pred Cceeccccccc---cCCCCc-----cCcccCcccccCCcccc
Q 025960 123 RIRYCRKCNQL---KPPRCH-----HCSVCGRCILKMDHHCV 156 (245)
Q Consensus 123 ~~~~C~~C~~~---kP~Rs~-----HC~~C~~CV~~~DHhCp 156 (245)
..+||+.|+.. |.+|.. .||.|+.-... |-.|.
T Consensus 3 ~~rFC~eCnNmLYPKEDk~~~~L~yaCR~C~y~e~A-~~~cV 43 (49)
T d1twfi1 3 TFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEA-GSPLV 43 (49)
T ss_dssp CCCBCSSSCCBCEEEEETTTTEEEEECSSSSCEEEC-SCSEE
T ss_pred ceecChhcccccccCCccccCEEEEEccCCCceeEc-CCCeE
Confidence 35889999863 444433 48888775544 43343
No 13
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=52.87 E-value=2.2 Score=23.49 Aligned_cols=13 Identities=54% Similarity=1.111 Sum_probs=10.7
Q ss_pred CCCCccCcccCcc
Q 025960 135 PPRCHHCSVCGRC 147 (245)
Q Consensus 135 P~Rs~HC~~C~~C 147 (245)
|+|.+-|+.|++-
T Consensus 2 p~r~~~C~~C~k~ 14 (37)
T d1njqa_ 2 PPRSYTCSFCKRE 14 (37)
T ss_dssp CSSSEECTTTCCE
T ss_pred CCCccCCCCCCCc
Confidence 7888999998873
No 14
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=47.76 E-value=4.4 Score=28.15 Aligned_cols=26 Identities=15% Similarity=0.452 Sum_probs=18.3
Q ss_pred Cceeccccccc-cC--CCCccCcccCccc
Q 025960 123 RIRYCRKCNQL-KP--PRCHHCSVCGRCI 148 (245)
Q Consensus 123 ~~~~C~~C~~~-kP--~Rs~HC~~C~~CV 148 (245)
..+-|..|+.. .+ .|.|||+.|++-|
T Consensus 47 ~~~~C~~C~~~f~~~~~~~~~C~~C~~~~ 75 (124)
T d1zbdb_ 47 GVNRCILCGEQLGMLGSASVVCEDCKKNV 75 (124)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEE
T ss_pred CCCcCcccCCcccCCCCCCCcCccCCccc
Confidence 34669999764 33 5778999997654
No 15
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.99 E-value=2.4 Score=24.96 Aligned_cols=12 Identities=25% Similarity=0.581 Sum_probs=9.8
Q ss_pred CCCccCcccCcc
Q 025960 136 PRCHHCSVCGRC 147 (245)
Q Consensus 136 ~Rs~HC~~C~~C 147 (245)
.|-|||+.||+-
T Consensus 14 ~rkhhCr~CG~~ 25 (51)
T d1y02a2 14 ARKQTCLDCKKN 25 (51)
T ss_dssp GGCEECTTTCCE
T ss_pred ccCcccccCCcc
Confidence 467999999884
No 16
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=41.16 E-value=2.4 Score=22.08 Aligned_cols=14 Identities=29% Similarity=0.783 Sum_probs=11.6
Q ss_pred ccCcccCcccccCC
Q 025960 139 HHCSVCGRCILKMD 152 (245)
Q Consensus 139 ~HC~~C~~CV~~~D 152 (245)
..|..|+||-.|.|
T Consensus 2 f~C~~C~R~FaRrD 15 (31)
T d2adra2 2 YPCGLCNRAFTRRD 15 (31)
T ss_dssp EECTTTCCEESSHH
T ss_pred cccccccchhhHHH
Confidence 36899999988877
No 17
>d1q5wa_ g.41.11.1 (A:) Npl4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=37.95 E-value=7.4 Score=19.97 Aligned_cols=21 Identities=29% Similarity=0.928 Sum_probs=16.3
Q ss_pred eeccccccccCCCCccCcccC
Q 025960 125 RYCRKCNQLKPPRCHHCSVCG 145 (245)
Q Consensus 125 ~~C~~C~~~kP~Rs~HC~~C~ 145 (245)
--|..|--...|.+.||.-|+
T Consensus 7 WsC~HCTf~N~pgtd~CeMC~ 27 (31)
T d1q5wa_ 7 WACQHCTFMNQPGTGHCEMCS 27 (31)
T ss_dssp EECSSSCCEECTTCSBCTTTC
T ss_pred eEeeeeeeecCCCCCcchhhc
Confidence 358888888888888887764
No 18
>d1lpva_ g.62.1.1 (A:) DM domain of Doublesex (dsx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=31.72 E-value=6.8 Score=23.06 Aligned_cols=25 Identities=32% Similarity=0.662 Sum_probs=15.3
Q ss_pred CCCCccCcccCcccccCCc--cccccc
Q 025960 135 PPRCHHCSVCGRCILKMDH--HCVWVV 159 (245)
Q Consensus 135 P~Rs~HC~~C~~CV~~~DH--hCpwi~ 159 (245)
||+...|+.=|.-+..-+| +|||-+
T Consensus 7 ~p~CaRCrNHG~~~~lKgHKr~C~~~~ 33 (52)
T d1lpva_ 7 PPNCARCRNHGLKITLKGHKRYCKFRY 33 (52)
T ss_dssp CSSCHHHHTTTCCCTTTTCGGGCTTTT
T ss_pred CCCCcccccCCceeecCCcccccCCCC
Confidence 3444444444666666677 899864
No 19
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.61 E-value=26 Score=22.48 Aligned_cols=24 Identities=25% Similarity=0.596 Sum_probs=20.0
Q ss_pred ceeccccccccCCCCccCcccCcc
Q 025960 124 IRYCRKCNQLKPPRCHHCSVCGRC 147 (245)
Q Consensus 124 ~~~C~~C~~~kP~Rs~HC~~C~~C 147 (245)
...|..|..+-..--.-||.|+|+
T Consensus 15 D~mC~vC~v~t~~~l~pCRvCtRv 38 (89)
T d1wila_ 15 DEMCDVCEVWTAESLFPCRVCTRV 38 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSSSSSC
T ss_pred CccccccCcccccceecceeecch
Confidence 467999988888877889999886
No 20
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=27.51 E-value=16 Score=21.92 Aligned_cols=23 Identities=35% Similarity=0.912 Sum_probs=14.8
Q ss_pred cCceeccccccccCCCCcc-CcccCc
Q 025960 122 PRIRYCRKCNQLKPPRCHH-CSVCGR 146 (245)
Q Consensus 122 ~~~~~C~~C~~~kP~Rs~H-C~~C~~ 146 (245)
.....|..|+..+ ++|| |..||.
T Consensus 27 p~l~~C~~CG~~~--~pHrvC~~CG~ 50 (59)
T d2j0151 27 PTLVPCPECKAMK--PPHTVCPECGY 50 (59)
T ss_dssp CCCBCCSSSSSCB--CTTCBCTTTCC
T ss_pred CceeECCCCCCcc--cceeECCCCCe
Confidence 3457799998644 4454 777764
No 21
>d2gnra1 b.40.4.15 (A:8-144) Hypothetical protein SSO2064 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=27.46 E-value=8.1 Score=27.23 Aligned_cols=26 Identities=23% Similarity=0.352 Sum_probs=18.2
Q ss_pred cCceeccccccccCCCCccCcccCcc
Q 025960 122 PRIRYCRKCNQLKPPRCHHCSVCGRC 147 (245)
Q Consensus 122 ~~~~~C~~C~~~kP~Rs~HC~~C~~C 147 (245)
...+.|..|+...-|...+|..|+.-
T Consensus 37 L~~~~C~~CG~v~~Ppr~~Cp~C~s~ 62 (137)
T d2gnra1 37 IIGSKCSKCGRIFVPARSYCEHCFVK 62 (137)
T ss_dssp CEEEECTTTCCEEESCCSEETTTTEE
T ss_pred EEEEEcCCCCCEEeCccccCCCCCCC
Confidence 34588999976555545569888764
No 22
>d1shyb2 g.16.2.1 (B:516-564) Hepatocyte growth factor receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.33 E-value=6.2 Score=22.93 Aligned_cols=18 Identities=22% Similarity=0.733 Sum_probs=10.3
Q ss_pred cccCcccccCCcc-ccccc
Q 025960 142 SVCGRCILKMDHH-CVWVV 159 (245)
Q Consensus 142 ~~C~~CV~~~DHh-Cpwi~ 159 (245)
+.|+.|+..-|.+ |.|=+
T Consensus 9 ~sC~~Cl~a~~~y~CgWC~ 27 (49)
T d1shyb2 9 QSCSQCLSAPPFVQCGWCH 27 (49)
T ss_dssp CSHHHHHTSCGGGCCEEET
T ss_pred CCHHHHHcCCCCCcCcCcC
Confidence 3466666666664 66643
No 23
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.07 E-value=12 Score=18.39 Aligned_cols=12 Identities=33% Similarity=1.262 Sum_probs=8.8
Q ss_pred cCcccCcccccC
Q 025960 140 HCSVCGRCILKM 151 (245)
Q Consensus 140 HC~~C~~CV~~~ 151 (245)
.|..||+|-.|-
T Consensus 3 ~c~kcgkcyfrk 14 (28)
T d2dlqa2 3 ECPKCGKCYFRK 14 (28)
T ss_dssp BCTTTCCBCSSH
T ss_pred ccccchhhhhhH
Confidence 588888887653
No 24
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.16 E-value=12 Score=18.55 Aligned_cols=11 Identities=45% Similarity=1.232 Sum_probs=7.5
Q ss_pred CCccCcccCcc
Q 025960 137 RCHHCSVCGRC 147 (245)
Q Consensus 137 Rs~HC~~C~~C 147 (245)
|-|-|..||+-
T Consensus 1 r~hvc~ecgka 11 (28)
T d1ubdc2 1 RVHVCAECGKA 11 (28)
T ss_dssp CCEECTTTCCE
T ss_pred CcchHHHHhHH
Confidence 55678887763
Done!