Your job contains 1 sequence.
>025961
MILPWNEYPILSHGNHISQTPSHSQTLPESDTIGCMACNINISIRCSTDTPRFAATCQLQ
LDSRNPRSPLLLKLLPSPALTQRPNKIAYSSYTPRRSYVTVRSHMATEEKSISGDRMLVF
VPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASV
EFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLV
ITLEV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025961
(245 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2084385 - symbol:UPP "uracil phosphoribosyltra... 559 4.3e-54 1
TIGR_CMR|BA_5557 - symbol:BA_5557 "uracil phosphoribosylt... 163 3.9e-12 1
ASPGD|ASPL0000050022 - symbol:AN2133 species:162425 "Emer... 144 1.7e-08 1
UNIPROTKB|P0A658 - symbol:upp "Uracil phosphoribosyltrans... 137 6.2e-08 1
UNIPROTKB|P0A8F0 - symbol:upp "Upp" species:83333 "Escher... 131 4.5e-07 1
TIGR_CMR|CPS_4319 - symbol:CPS_4319 "uracil phosphoribosy... 131 4.5e-07 1
TIGR_CMR|SO_2759 - symbol:SO_2759 "uracil phosphoribosylt... 131 4.5e-07 1
TIGR_CMR|GSU_0933 - symbol:GSU_0933 "uracil phosphoribosy... 131 4.7e-07 1
TIGR_CMR|SPO_2926 - symbol:SPO_2926 "uracil phosphoribosy... 131 4.8e-07 1
TAIR|locus:2084420 - symbol:SIGC "AT3G53920" species:3702... 132 4.5e-06 1
TIGR_CMR|CJE_1478 - symbol:CJE_1478 "uracil phosphoribosy... 123 5.3e-06 1
UNIPROTKB|Q9KPY7 - symbol:upp "Uracil phosphoribosyltrans... 120 1.3e-05 1
TIGR_CMR|VC_2225 - symbol:VC_2225 "uracil phosphoribosylt... 120 1.3e-05 1
>TAIR|locus:2084385 [details] [associations]
symbol:UPP "uracil phosphoribosyltransferase"
species:3702 "Arabidopsis thaliana" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=IEA;ISS;IMP]
[GO:0006223 "uracil salvage" evidence=IEA] [GO:0009116 "nucleoside
metabolic process" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016036 "cellular response to phosphate
starvation" evidence=IEP] [GO:0009536 "plastid" evidence=IDA]
[GO:0032502 "developmental process" evidence=IMP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 GO:GO:0005829 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132960 GO:GO:0016036
GO:GO:0032502 GO:GO:0044206 GO:GO:0004845 eggNOG:COG0035 KO:K00761
GO:GO:0006223 HOGENOM:HOG000262754 EMBL:AY056189 EMBL:AY113998
EMBL:AY084756 IPI:IPI00543325 IPI:IPI00545184 PIR:T45930
RefSeq:NP_190958.1 RefSeq:NP_850699.1 UniGene:At.20036 HSSP:P70881
ProteinModelPortal:Q9M336 SMR:Q9M336 IntAct:Q9M336 STRING:Q9M336
PaxDb:Q9M336 PRIDE:Q9M336 EnsemblPlants:AT3G53900.2 GeneID:824557
KEGG:ath:AT3G53900 TAIR:At3g53900 InParanoid:Q9M336 OMA:TIEGWCG
PhylomeDB:Q9M336 ProtClustDB:PLN02541 Genevestigator:Q9M336
TIGRFAMs:TIGR01091 Uniprot:Q9M336
Length = 296
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 118/185 (63%), Positives = 135/185 (72%)
Query: 36 MACNINISIRCSTDTPRFAATCQLQLDSR-NXXXXXXXXXXXXXXXTQRPNKIAYSSYTP 94
MAC+I + RCS+DT RFA + Q SR N Q N A SS
Sbjct: 1 MACSIGNAFRCSSDTLRFAP--RQQCSSRLNPNPSSFLSFNSSPILAQ--NLGASSSSLS 56
Query: 95 RRSYVTVRSHMATEEKSISG-DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGR 153
RR+ + R+ MA E SI+G +RMLVFVPPHPLIKHW+S+LRNEQTPCP+FRNA+AELGR
Sbjct: 57 RRT-IRARTKMAASEASINGSNRMLVFVPPHPLIKHWISVLRNEQTPCPVFRNAIAELGR 115
Query: 154 LLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIK 213
LLMYEASR+WLPTV GEI SPMG ASVEFIDPREP+AV+PILRAGL L EHASS+LPA K
Sbjct: 116 LLMYEASREWLPTVVGEIMSPMGPASVEFIDPREPIAVVPILRAGLALAEHASSVLPANK 175
Query: 214 TYHLG 218
YHLG
Sbjct: 176 IYHLG 180
>TIGR_CMR|BA_5557 [details] [associations]
symbol:BA_5557 "uracil phosphoribosyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044206 GO:GO:0004845
eggNOG:COG0035 KO:K00761 GO:GO:0006223 HOGENOM:HOG000262754
TIGRFAMs:TIGR01091 RefSeq:NP_847715.1 RefSeq:YP_022226.1
RefSeq:YP_031403.1 ProteinModelPortal:Q81JY5 SMR:Q81JY5
IntAct:Q81JY5 PRIDE:Q81JY5 DNASU:1085245
EnsemblBacteria:EBBACT00000008785 EnsemblBacteria:EBBACT00000016305
EnsemblBacteria:EBBACT00000020398 GeneID:1085245 GeneID:2820073
GeneID:2852230 KEGG:ban:BA_5557 KEGG:bar:GBAA_5557 KEGG:bat:BAS5164
OMA:YEVTRDM ProtClustDB:PRK00129
BioCyc:BANT260799:GJAJ-5239-MONOMER
BioCyc:BANT261594:GJ7F-5418-MONOMER HAMAP:MF_01218_B Uniprot:Q81JY5
Length = 209
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 36/100 (36%), Positives = 63/100 (63%)
Query: 119 VFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVA 178
++V HPLI+H ++ +R++ T FR + E+ L+ +E +RD LP EI++P+ A
Sbjct: 4 LYVFDHPLIQHKITYIRDKNTGTKDFRELVDEVASLMAFEITRD-LPLKDIEIETPVSKA 62
Query: 179 SVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
+ + I ++ + +IPILRAGL +V+ ++PA K H+G
Sbjct: 63 TTKVIAGKK-LGLIPILRAGLGMVDGILKLIPAAKVGHVG 101
>ASPGD|ASPL0000050022 [details] [associations]
symbol:AN2133 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0009116 "nucleoside metabolic process" evidence=IEA]
InterPro:IPR000836 Pfam:PF00156 GO:GO:0009116 EMBL:BN001307
GO:GO:0016757 EMBL:AACD01000034 eggNOG:COG0035 KO:K00761
HOGENOM:HOG000262754 OrthoDB:EOG422DTX RefSeq:XP_659737.1
ProteinModelPortal:Q5BBE7 STRING:Q5BBE7
EnsemblFungi:CADANIAT00008811 GeneID:2875393 KEGG:ani:AN2133.2
OMA:HIGLYRE Uniprot:Q5BBE7
Length = 237
Score = 144 (55.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 34/103 (33%), Positives = 59/103 (57%)
Query: 119 VFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQS-PMGV 177
+ + HPL++ VS LR+ T R+ + E+ +L EA W +G+ S P+G+
Sbjct: 7 IHISTHPLLQAKVSQLRSSSTTTRETRSLVNEIATILGVEAFATWKAAGTGKTDSTPLGI 66
Query: 178 A-SVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLG 218
+ IDP +A++PILR+GL +++ + +LP+ + YHLG
Sbjct: 67 EYETKTIDPAN-IALVPILRSGLGMIDAINDLLPSPVPIYHLG 108
>UNIPROTKB|P0A658 [details] [associations]
symbol:upp "Uracil phosphoribosyltransferase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842582
GO:GO:0044206 GO:GO:0004845 eggNOG:COG0035 KO:K00761 GO:GO:0006223
HOGENOM:HOG000262754 TIGRFAMs:TIGR01091 ProtClustDB:PRK00129
HAMAP:MF_01218_B PIR:D70842 RefSeq:NP_217826.1 RefSeq:NP_337937.1
RefSeq:YP_006516786.1 ProteinModelPortal:P0A658 SMR:P0A658
PRIDE:P0A658 EnsemblBacteria:EBMYCT00000003162
EnsemblBacteria:EBMYCT00000070249 GeneID:13318132 GeneID:887944
GeneID:926292 KEGG:mtc:MT3408 KEGG:mtu:Rv3309c KEGG:mtv:RVBD_3309c
PATRIC:18129244 TubercuList:Rv3309c OMA:DSPTFRR Uniprot:P0A658
Length = 207
Score = 137 (53.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 41/106 (38%), Positives = 60/106 (56%)
Query: 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMG 176
M V V HPL ++ LR+E+T FR A+ EL LL+YEA+RD P I++P+
Sbjct: 1 MQVHVVDHPLAAARLTTLRDERTDNAGFRAALRELTLLLIYEATRD-APCEPVPIRTPLA 59
Query: 177 VASVEFIDPR--EPVAVIPILRAGLVLVEHASSILPAIKTYHLGKV 220
E + R +P ++P+LRAGL +V+ A + LP H+G V
Sbjct: 60 ----ETVGSRLTKPPLLVPVLRAGLGMVDEAHAALPEA---HVGFV 98
>UNIPROTKB|P0A8F0 [details] [associations]
symbol:upp "Upp" species:83333 "Escherichia coli K-12"
[GO:0009116 "nucleoside metabolic process" evidence=IEA]
[GO:0006223 "uracil salvage" evidence=IEA] [GO:0044206 "UMP
salvage" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0016757 "transferase activity,
transferring glycosyl groups" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=IEA]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 ECOGENE:EG11332 GO:GO:0005525 GO:GO:0005829
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0044206 GO:GO:0004845 eggNOG:COG0035
KO:K00761 GO:GO:0006223 HOGENOM:HOG000262754 OMA:TIEGWCG
TIGRFAMs:TIGR01091 ProtClustDB:PRK00129 HAMAP:MF_01218_B
EMBL:X57104 PIR:A65026 RefSeq:NP_416993.2 RefSeq:YP_490726.1
PDB:2EHJ PDBsum:2EHJ ProteinModelPortal:P0A8F0 SMR:P0A8F0
DIP:DIP-36228N IntAct:P0A8F0 SWISS-2DPAGE:P0A8F0 PRIDE:P0A8F0
EnsemblBacteria:EBESCT00000002530 EnsemblBacteria:EBESCT00000017755
GeneID:12932444 GeneID:946979 KEGG:ecj:Y75_p2451 KEGG:eco:b2498
PATRIC:32120383 EchoBASE:EB1308
BioCyc:EcoCyc:URACIL-PRIBOSYLTRANS-MONOMER
BioCyc:ECOL316407:JW2483-MONOMER
BioCyc:MetaCyc:URACIL-PRIBOSYLTRANS-MONOMER
EvolutionaryTrace:P0A8F0 Genevestigator:P0A8F0 Uniprot:P0A8F0
Length = 208
Score = 131 (51.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 124 HPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFI 183
HPL+KH + ++R + FR +E+G LL YEA+ D L T I+ G ++ I
Sbjct: 8 HPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATAD-LETEKVTIEGWNGPVEIDQI 66
Query: 184 DPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
++ + V+PILRAGL +++ +P+ + +G
Sbjct: 67 KGKK-ITVVPILRAGLGMMDGVLENVPSARISVVG 100
>TIGR_CMR|CPS_4319 [details] [associations]
symbol:CPS_4319 "uracil phosphoribosyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044206 GO:GO:0004845
eggNOG:COG0035 KO:K00761 GO:GO:0006223 HOGENOM:HOG000262754
OMA:TIEGWCG TIGRFAMs:TIGR01091 HAMAP:MF_01218_B RefSeq:YP_270969.1
HSSP:Q9WZI0 ProteinModelPortal:Q47W53 SMR:Q47W53 STRING:Q47W53
GeneID:3522173 KEGG:cps:CPS_4319 PATRIC:21471487
BioCyc:CPSY167879:GI48-4329-MONOMER Uniprot:Q47W53
Length = 208
Score = 131 (51.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 32/102 (31%), Positives = 59/102 (57%)
Query: 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMG 176
M VF HPL++H +S++R + FR AE+G LL YEA++D L + +++ G
Sbjct: 1 MSVFEIKHPLVQHKISLMRAKDMSTRSFRQLSAEVGSLLTYEATKD-LELENFQMEGWDG 59
Query: 177 VASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
+ + + ++ V+PILRAG+ +++ ++P+ K +G
Sbjct: 60 EITGQRLVGKK-ATVVPILRAGIGMLDGVLELMPSAKISVVG 100
>TIGR_CMR|SO_2759 [details] [associations]
symbol:SO_2759 "uracil phosphoribosyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044206 GO:GO:0004845
eggNOG:COG0035 KO:K00761 GO:GO:0006223 HOGENOM:HOG000262754
OMA:TIEGWCG TIGRFAMs:TIGR01091 ProtClustDB:PRK00129
HAMAP:MF_01218_B RefSeq:NP_718341.1 ProteinModelPortal:Q8EDI9
SMR:Q8EDI9 GeneID:1170460 KEGG:son:SO_2759 PATRIC:23525153
Uniprot:Q8EDI9
Length = 208
Score = 131 (51.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMG 176
M V HPL++H + ++R FR AE+G LL YEA+ D+ T + I+ G
Sbjct: 1 MKVVEVKHPLVRHKIGLMREGDISTKRFRELAAEVGSLLTYEATADF-ETETVTIEGWNG 59
Query: 177 VASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
V+ I ++ V V+PILRAGL +++ +P+ + +G
Sbjct: 60 PVDVDQIKGKK-VTVVPILRAGLGMMDGVLEHIPSARISVVG 100
>TIGR_CMR|GSU_0933 [details] [associations]
symbol:GSU_0933 "uracil phosphoribosyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044206 GO:GO:0004845
eggNOG:COG0035 KO:K00761 GO:GO:0006223 HOGENOM:HOG000262754
OMA:TIEGWCG TIGRFAMs:TIGR01091 ProtClustDB:PRK00129
HAMAP:MF_01218_B RefSeq:NP_951987.1 ProteinModelPortal:Q74EM9
SMR:Q74EM9 GeneID:2687088 KEGG:gsu:GSU0933 PATRIC:22024644
BioCyc:GSUL243231:GH27-918-MONOMER Uniprot:Q74EM9
Length = 209
Score = 131 (51.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 31/98 (31%), Positives = 54/98 (55%)
Query: 124 HPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDW---LPTVSGEIQSPMGVASV 180
HPL++H + ++R FR AEL RLL YEA D+ + T++G +P+ + +
Sbjct: 8 HPLVRHKIGLMREADISTKKFRELAAELARLLAYEACGDFPLEVRTITGWDGNPVEIEQI 67
Query: 181 EFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
+ + V V+PILRAG+ +++ ++P K +G
Sbjct: 68 K----GKKVTVVPILRAGIGMLDGVLDMIPNAKVSVVG 101
>TIGR_CMR|SPO_2926 [details] [associations]
symbol:SPO_2926 "uracil phosphoribosyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 GO:GO:0000287 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0044206 GO:GO:0004845 KO:K00761
GO:GO:0006223 HOGENOM:HOG000262754 TIGRFAMs:TIGR01091 OMA:YEVTRDM
ProtClustDB:PRK00129 HAMAP:MF_01218_B RefSeq:YP_168134.1
ProteinModelPortal:Q5LPC2 SMR:Q5LPC2 GeneID:3193814
KEGG:sil:SPO2926 PATRIC:23379281 Uniprot:Q5LPC2
Length = 210
Score = 131 (51.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 34/128 (26%), Positives = 71/128 (55%)
Query: 121 VPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASV 180
V HPL++H ++++R++ T FR + E+ +LL YE +R+ +P + I++P+
Sbjct: 7 VVDHPLVQHKLTLMRDKGTSTASFRQLLREITQLLAYEVTRE-MPLTTRTIETPLEEMEA 65
Query: 181 EFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG----KVVLMHACIVDEVSLGLR 236
+ ++ +A++ ILRAG +++ ++P+ + +G + L +V GL+
Sbjct: 66 PILAGKK-LALVSILRAGNGMLDGVLELVPSARVGFVGLYRDEETLQPVQYYFKVPEGLQ 124
Query: 237 FRLVITLE 244
RLVI ++
Sbjct: 125 DRLVIAVD 132
>TAIR|locus:2084420 [details] [associations]
symbol:SIGC "AT3G53920" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0003899 "DNA-directed RNA polymerase activity"
evidence=ISS;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0019685 "photosynthesis, dark reaction"
evidence=NAS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IDA;TAS] [GO:0071482 "cellular response to light stimulus"
evidence=IEP] [GO:0001053 "plastid sigma factor activity"
evidence=IMP] [GO:2001141 "regulation of RNA biosynthetic process"
evidence=IMP] [GO:0016987 "sigma factor activity" evidence=ISS]
InterPro:IPR000943 InterPro:IPR007624 InterPro:IPR007627
InterPro:IPR007630 InterPro:IPR013324 InterPro:IPR013325
InterPro:IPR014284 Pfam:PF04539 Pfam:PF04542 Pfam:PF04545
PRINTS:PR00046 GO:GO:0009507 EMBL:CP002686 GO:GO:0003677
GO:GO:0003700 GO:GO:0006352 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AL132960 GO:GO:0003899 GO:GO:0071482 SUPFAM:SSF88946
SUPFAM:SSF88659 TIGRFAMs:TIGR02937 eggNOG:COG0568 HSSP:Q9EZJ8
GO:GO:0001053 InterPro:IPR016262 PIRSF:PIRSF000767 EMBL:D89994
EMBL:AB019944 EMBL:AB004822 EMBL:AF015544 EMBL:BT030362
EMBL:AY128331 IPI:IPI00530485 PIR:T45932 RefSeq:NP_190960.1
UniGene:At.21270 ProteinModelPortal:O24621 SMR:O24621 STRING:O24621
PRIDE:O24621 EnsemblPlants:AT3G53920.1 GeneID:824559
KEGG:ath:AT3G53920 GeneFarm:26 TAIR:At3g53920 InParanoid:O24621
KO:K03093 OMA:WIRKSMS PhylomeDB:O24621 ProtClustDB:CLSN2685061
Genevestigator:O24621 Uniprot:O24621
Length = 571
Score = 132 (51.5 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 90 SSYTPRRSYVTVRSHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIF 144
SS + R + VRS + + S + MLVFV PHPLIKHW+S+LR++QT PIF
Sbjct: 20 SSSSTSRPRILVRSSLTSSMTSTNS--MLVFVHPHPLIKHWLSLLRSDQTSFPIF 72
>TIGR_CMR|CJE_1478 [details] [associations]
symbol:CJE_1478 "uracil phosphoribosyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044206 GO:GO:0004845
eggNOG:COG0035 KO:K00761 GO:GO:0006223 HOGENOM:HOG000262754
HSSP:P70881 OMA:TIEGWCG TIGRFAMs:TIGR01091 ProtClustDB:PRK00129
HAMAP:MF_01218_B RefSeq:YP_179464.1 ProteinModelPortal:Q5HTC1
STRING:Q5HTC1 GeneID:3232110 KEGG:cjr:CJE1478 PATRIC:20044750
BioCyc:CJEJ195099:GJC0-1507-MONOMER Uniprot:Q5HTC1
Length = 208
Score = 123 (48.4 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 34/98 (34%), Positives = 56/98 (57%)
Query: 124 HPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDW-LPTVSGEIQSPMGVASVEF 182
HPLI+H + ILR ++T FR + E+ L++EAS+D+ L + EI + + +V+
Sbjct: 9 HPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEASKDFSLKEI--EISTLIQKTTVKK 66
Query: 183 IDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKV 220
+D E + + PILRA L ++E ++P LG V
Sbjct: 67 LD--EKIMICPILRAALGMLESVFKMIPDASVGFLGFV 102
>UNIPROTKB|Q9KPY7 [details] [associations]
symbol:upp "Uracil phosphoribosyltransferase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004845 "uracil phosphoribosyltransferase activity"
evidence=ISS] [GO:0008655 "pyrimidine-containing compound salvage"
evidence=ISS] InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008655 GO:GO:0044206 GO:GO:0004845
eggNOG:COG0035 KO:K00761 GO:GO:0006223 OMA:TIEGWCG
TIGRFAMs:TIGR01091 ProtClustDB:PRK00129 HAMAP:MF_01218_B PIR:E82103
RefSeq:NP_231856.1 ProteinModelPortal:Q9KPY7 SMR:Q9KPY7
PRIDE:Q9KPY7 DNASU:2613265 GeneID:2613265 KEGG:vch:VC2225
PATRIC:20083497 Uniprot:Q9KPY7
Length = 208
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 124 HPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFI 183
HPL+KH + ++R FR E+ LL YEA+ D+ T I+ G V+ I
Sbjct: 8 HPLVKHKLGLMREGDISTKRFRELATEVASLLTYEATSDF-ETEKVTIEGWNGPVQVDQI 66
Query: 184 DPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
++ V V+PILRAGL +++ +P+ + +G
Sbjct: 67 KGKK-VTVVPILRAGLGMMDGVLEHIPSARISVVG 100
>TIGR_CMR|VC_2225 [details] [associations]
symbol:VC_2225 "uracil phosphoribosyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004845 "uracil
phosphoribosyltransferase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR000836 InterPro:IPR005765 Pfam:PF00156
UniPathway:UPA00574 GO:GO:0005525 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008655 GO:GO:0044206 GO:GO:0004845
eggNOG:COG0035 KO:K00761 GO:GO:0006223 OMA:TIEGWCG
TIGRFAMs:TIGR01091 ProtClustDB:PRK00129 HAMAP:MF_01218_B PIR:E82103
RefSeq:NP_231856.1 ProteinModelPortal:Q9KPY7 SMR:Q9KPY7
PRIDE:Q9KPY7 DNASU:2613265 GeneID:2613265 KEGG:vch:VC2225
PATRIC:20083497 Uniprot:Q9KPY7
Length = 208
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 124 HPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFI 183
HPL+KH + ++R FR E+ LL YEA+ D+ T I+ G V+ I
Sbjct: 8 HPLVKHKLGLMREGDISTKRFRELATEVASLLTYEATSDF-ETEKVTIEGWNGPVQVDQI 66
Query: 184 DPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
++ V V+PILRAGL +++ +P+ + +G
Sbjct: 67 KGKK-VTVVPILRAGLGMMDGVLEHIPSARISVVG 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 245 230 0.00083 113 3 11 22 0.37 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 606 (64 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.97u 0.22s 18.19t Elapsed: 00:00:01
Total cpu time: 17.97u 0.22s 18.19t Elapsed: 00:00:01
Start: Sat May 11 10:12:38 2013 End: Sat May 11 10:12:39 2013