BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025974
(245 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539324|ref|XP_002510727.1| conserved hypothetical protein [Ricinus communis]
gi|223551428|gb|EEF52914.1| conserved hypothetical protein [Ricinus communis]
Length = 264
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 181/253 (71%), Gaps = 30/253 (11%)
Query: 15 SPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQEDDAR--TLNRFRIEEQDDD 72
+PLH +P+ +F + S + N +KQ + CC ++D RFR++E
Sbjct: 20 TPLHLL--KPN-LNFLSASPSFRFNSCRKQHLPCCTNSFPDEDQHQPLFCRFRLQEP--- 73
Query: 73 SRTKRREVMFQLAFT-ACSFPAIVSYALA-------------------ANDWQLGAGEPN 112
RRE +F +AFT +FP ++S A A DW++GAGEPN
Sbjct: 74 --YGRREALFSVAFTTGFTFPGLISNAFAEIDDFRLYTDDANKFQISIPQDWRVGAGEPN 131
Query: 113 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 172
GFKS+TAFYP+EAS SSVSVVITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+RPPGVA
Sbjct: 132 GFKSVTAFYPEEASGSSVSVVITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQRPPGVA 191
Query: 173 AKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 232
AKLIDCKA+KG YYIEYTLQNPGE RKHLFSA+GMA NGWYNRLYTVTGQFVEEESE YG
Sbjct: 192 AKLIDCKATKGIYYIEYTLQNPGEGRKHLFSALGMAFNGWYNRLYTVTGQFVEEESENYG 251
Query: 233 SNIEKAVASFRFI 245
S ++K V+SF+FI
Sbjct: 252 SKVQKVVSSFKFI 264
>gi|225457650|ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3, chloroplastic [Vitis
vinifera]
gi|297745601|emb|CBI40766.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 181/262 (69%), Gaps = 36/262 (13%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFR 65
MA PL R F+A+S+ KG KKQ V CK + +E++ + F
Sbjct: 1 MALYFPLPL---RSGSCDFSAYSSKKGYGSRTGKCGKKQRVVFCKNENKEEEKTS---FG 54
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA----------------------AND 103
I+EQ R REV+ Q+ F+ S AIV ALA D
Sbjct: 55 IKEQHGGGR---REVVLQMVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQD 111
Query: 104 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 163
WQ+G+GEP+GFKS+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDR
Sbjct: 112 WQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDR 171
Query: 164 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 223
SW+RPPG+AAKLIDC+A+ GFYYIEY LQNPGESR+HLFSA+GMA+NGWYNRLYTVTGQ+
Sbjct: 172 SWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQY 231
Query: 224 VEEESEKYGSNIEKAVASFRFI 245
+EEESEK+ S IEK VASFRFI
Sbjct: 232 LEEESEKFSSKIEKVVASFRFI 253
>gi|449458059|ref|XP_004146765.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 257
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 151/196 (77%), Gaps = 23/196 (11%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALA---------------AN--------DWQLGAG 109
S RRE+M + FTA SF + S ALA AN DWQ+G G
Sbjct: 62 SGVNRREIMLGIGFTAFSFQEVGSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNG 121
Query: 110 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 169
EPNGFKS+TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPP
Sbjct: 122 EPNGFKSVTAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPP 181
Query: 170 GVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 229
GVAAKLIDC++SKG YYIEYTLQNPGESRKHL+SAIGM+SNGWYNRLYT+TGQ+ +EESE
Sbjct: 182 GVAAKLIDCRSSKGIYYIEYTLQNPGESRKHLYSAIGMSSNGWYNRLYTITGQYADEESE 241
Query: 230 KYGSNIEKAVASFRFI 245
Y S IEK V SF FI
Sbjct: 242 SYSSKIEKVVNSFAFI 257
>gi|188509930|gb|ACD56619.1| unknown predicted protein [Gossypioides kirkii]
Length = 274
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 153/199 (76%), Gaps = 28/199 (14%)
Query: 67 EEQDDD---SRTKRREVMFQLAFTACSFP-AIVSYALAA--------------------- 101
E ++DD + T+RR+ + Q A SFP I+S A+A
Sbjct: 46 EMKEDDGHATSTRRRQFILQAPLIAFSFPQLIMSTAIAVAEIDVPQDFRVYTDEQNKFKI 105
Query: 102 ---NDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLV 158
DWQ+GAGEPN FKSITAFYP+E ++S+VSV ITGLGPDFTRMESFGKV+AFADTLV
Sbjct: 106 FIPQDWQVGAGEPNNFKSITAFYPEEEANSNVSVAITGLGPDFTRMESFGKVDAFADTLV 165
Query: 159 SGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYT 218
SGLDRSW+RPPGVAAKLIDCKA+ GFYYIEYTLQNPGESR+HLFSAIGMASNGWYNRLYT
Sbjct: 166 SGLDRSWQRPPGVAAKLIDCKAANGFYYIEYTLQNPGESRRHLFSAIGMASNGWYNRLYT 225
Query: 219 VTGQFVEEESEKYGSNIEK 237
VTGQFVEEE+EKYGS IEK
Sbjct: 226 VTGQFVEEEAEKYGSRIEK 244
>gi|147809819|emb|CAN64877.1| hypothetical protein VITISV_030793 [Vitis vinifera]
Length = 247
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/255 (55%), Positives = 174/255 (68%), Gaps = 36/255 (14%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFR 65
MA PL R F+A+S+ KG KKQ V CK + +E++ + F
Sbjct: 1 MALYFPLPL---RSGSCDFSAYSSKKGCGSRTGKCGKKQRVVFCKNENKEEEKTS---FG 54
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA----------------------AND 103
I+EQ R REV+ Q+ F+ S AIV ALA D
Sbjct: 55 IKEQHGGGR---REVVLQIVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQD 111
Query: 104 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 163
WQ+G+GEP+GFKS+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDR
Sbjct: 112 WQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDR 171
Query: 164 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 223
SW+RPPG+AAKLIDC+A+ GFYYIEY LQNPGESR+HLFSA+GMA+NGWYNRLYTVTGQ+
Sbjct: 172 SWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQY 231
Query: 224 VEEESEKYGSNIEKA 238
+EEESEK+ S IEK
Sbjct: 232 LEEESEKFSSKIEKV 246
>gi|449522159|ref|XP_004168095.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 188
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/188 (69%), Positives = 147/188 (78%), Gaps = 23/188 (12%)
Query: 81 MFQLAFTACSFPAIVSYALA---------------AN--------DWQLGAGEPNGFKSI 117
M + FTA SF +VS ALA AN DWQ+G GEPNGFKS+
Sbjct: 1 MLGIGFTAFSFQEVVSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNGEPNGFKSV 60
Query: 118 TAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLID 177
TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPPGVAAKLID
Sbjct: 61 TAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPPGVAAKLID 120
Query: 178 CKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEK 237
C++SKG YYIEYTLQNPGESRKHL+SAIGM+SNGWYNRLYT+TGQ+ +EESE Y S IEK
Sbjct: 121 CRSSKGIYYIEYTLQNPGESRKHLYSAIGMSSNGWYNRLYTITGQYADEESESYSSKIEK 180
Query: 238 AVASFRFI 245
V SF FI
Sbjct: 181 VVNSFAFI 188
>gi|224083366|ref|XP_002306998.1| predicted protein [Populus trichocarpa]
gi|222856447|gb|EEE93994.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/185 (68%), Positives = 146/185 (78%), Gaps = 22/185 (11%)
Query: 75 TKRREVMFQLAFTACSFPAIVSYALAAND----------------------WQLGAGEPN 112
TKRRE +F + FTA +FPAI S ALAA WQ+GAGEP+
Sbjct: 2 TKRREALFNMVFTAFTFPAIASTALAATGVAEDSRVYTDDANKFKISIPQGWQVGAGEPS 61
Query: 113 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 172
G+KS+TAFYP+EAS+SSVSVVITGLGPDFTR+ESFGKV+AFA+TLV GLDRSW+RPPGVA
Sbjct: 62 GYKSVTAFYPEEASNSSVSVVITGLGPDFTRLESFGKVDAFAETLVGGLDRSWQRPPGVA 121
Query: 173 AKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 232
AKLID KA+ G YYIEYTLQNPGESR+HL SA+G+ NGWYNRLYTVTGQFV+EESEK+G
Sbjct: 122 AKLIDSKAANGLYYIEYTLQNPGESRRHLLSALGVTFNGWYNRLYTVTGQFVDEESEKFG 181
Query: 233 SNIEK 237
+ I K
Sbjct: 182 TEIRK 186
>gi|21537211|gb|AAM61552.1| thylakoid lumen protein, chloroplast precursor [Arabidopsis
thaliana]
Length = 247
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 168/259 (64%), Gaps = 36/259 (13%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALA----------------------ANDWQL 106
+D KRR+VM Q+A + P +S A A DWQ+
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQV 108
Query: 107 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 166
G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 109 GQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 168
Query: 167 RPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 226
+P GV AKLID +ASKGFYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 169 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 228
Query: 227 ESEKYGSNIEKAVASFRFI 245
ES + S I+K V SFRFI
Sbjct: 229 ESSEQSSKIQKTVKSFRFI 247
>gi|18411110|ref|NP_565131.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
gi|18203439|sp|Q9S720.2|PPD3_ARATH RecName: Full=PsbP domain-containing protein 3, chloroplastic;
AltName: Full=OEC23-like protein 2; Flags: Precursor
gi|32815945|gb|AAP88357.1| At1g76450 [Arabidopsis thaliana]
gi|110742837|dbj|BAE99317.1| hypothetical protein [Arabidopsis thaliana]
gi|332197723|gb|AEE35844.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
Length = 247
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 168/259 (64%), Gaps = 36/259 (13%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALA----------------------ANDWQL 106
+D KRR+VM Q+A + P +S A A DWQ+
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQV 108
Query: 107 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 166
G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 109 GQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 168
Query: 167 RPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 226
+P GV AKLID +ASKGFYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 169 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 228
Query: 227 ESEKYGSNIEKAVASFRFI 245
ES + S I+K V SFRFI
Sbjct: 229 ESAEQSSKIQKTVKSFRFI 247
>gi|297839519|ref|XP_002887641.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
gi|297333482|gb|EFH63900.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 152/212 (71%), Gaps = 24/212 (11%)
Query: 57 DARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA--------------AN 102
D+ + RI +D KRRE M Q+A + P VS A A AN
Sbjct: 15 DSSNEEQHRISSRDHVG-IKRREAMLQIASSVFFLPLAVSPAFAETNASEAFRVYTDEAN 73
Query: 103 ---------DWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAF 153
DWQ+G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAF
Sbjct: 74 KFEISIPQEDWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAF 133
Query: 154 ADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWY 213
A+TLVSGLDRSW++P GV AKLID ++SKGFYYIEYTLQNPGE+RKHL+SAIGMA+NGWY
Sbjct: 134 AETLVSGLDRSWQKPAGVTAKLIDSRSSKGFYYIEYTLQNPGEARKHLYSAIGMATNGWY 193
Query: 214 NRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 245
NRLYTVTGQF +EES + S I+K V SFRFI
Sbjct: 194 NRLYTVTGQFTDEESAEQSSKIQKTVKSFRFI 225
>gi|388521577|gb|AFK48850.1| unknown [Lotus japonicus]
Length = 250
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 171/264 (64%), Gaps = 43/264 (16%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKG------TNQYKKQFVFCCKKQEQEDDARTLNRF 64
MASIS RP + TA + +KG +KK + ++ +NR
Sbjct: 1 MASISWSCCLRWRPTISDRTASAADKGFSPPITLEHHKKTPCLLSARNSSIEEGHAVNR- 59
Query: 65 RIEEQDDDSRTKRREVMFQLAFTA-CSFPAIVSYALAAND-------------------- 103
R+++F + A + P+ V ALA ND
Sbjct: 60 -------------RQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIP 106
Query: 104 --WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGL 161
W++G G+ +GFKS+TAFYP+EASSS+VSV ITGLGPDFT+MESFGKV+ FA+TLVSGL
Sbjct: 107 QDWEVGTGDSSGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGL 166
Query: 162 DRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTG 221
DRSWR+PPGVAAKLI+ K SKG YYIEY+LQNPGESR+HL+SAIGMA+NGWYNRLYTVTG
Sbjct: 167 DRSWRKPPGVAAKLINSKPSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTG 226
Query: 222 QFVEEESEKYGSNIEKAVASFRFI 245
Q+VEEE++KY S I+KAV SF+FI
Sbjct: 227 QYVEEETDKYASEIQKAVTSFKFI 250
>gi|357467179|ref|XP_003603874.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492922|gb|AES74125.1| PsbP domain-containing protein [Medicago truncatula]
Length = 241
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 146/191 (76%), Gaps = 22/191 (11%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAND----------------------WQLGAGEPNGF 114
RR+++ + A + + S ALA ND WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 115 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 174
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 175 LIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 234
LIDCK+SKGFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 235 IEKAVASFRFI 245
I+KAV SF+FI
Sbjct: 231 IQKAVRSFKFI 241
>gi|388507848|gb|AFK41990.1| unknown [Medicago truncatula]
Length = 241
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 145/191 (75%), Gaps = 22/191 (11%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAND----------------------WQLGAGEPNGF 114
RR+++ + A + + S ALA ND WQ+G GE GF
Sbjct: 51 RRQLILHTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 115 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 174
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 175 LIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 234
LIDCK+SKGFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 235 IEKAVASFRFI 245
I+K V SF+FI
Sbjct: 231 IQKTVRSFKFI 241
>gi|388515155|gb|AFK45639.1| unknown [Medicago truncatula]
Length = 241
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 145/191 (75%), Gaps = 22/191 (11%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAND----------------------WQLGAGEPNGF 114
RR+++ + A + + S ALA ND WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYADDENKFKIDIPQEWQIGTGESAGF 110
Query: 115 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 174
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 175 LIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 234
LIDCK+SKGFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 235 IEKAVASFRFI 245
I+KAV SF+ I
Sbjct: 231 IQKAVRSFKLI 241
>gi|356508481|ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 244
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Query: 103 DWQLGAG--EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSG 160
+WQ+G G E +GFKSITAFYP AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSG
Sbjct: 100 EWQVGTGDGESSGFKSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSG 159
Query: 161 LDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVT 220
LDRSWR+PPGVAAKLIDCK+S G YYIEY+LQNPGESR++L+SAIGMASNGWYNRLYTVT
Sbjct: 160 LDRSWRKPPGVAAKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVT 219
Query: 221 GQFVEEESEKYGSNIEKAVASFRFI 245
GQ+VEEE++KY S ++K VASFRFI
Sbjct: 220 GQYVEEETDKYASKVQKVVASFRFI 244
>gi|356517170|ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 248
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/145 (78%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Query: 103 DWQLGAG--EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSG 160
+WQ+G G E +GFKSITAFYP +AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSG
Sbjct: 104 EWQVGTGDGESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSG 163
Query: 161 LDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVT 220
LDRSWR+PPGVAAKLIDCK+S G YYIEY LQNPGESR++L+SAIGMASNGWYNRLYTVT
Sbjct: 164 LDRSWRKPPGVAAKLIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVT 223
Query: 221 GQFVEEESEKYGSNIEKAVASFRFI 245
GQ+VEE+++KY S ++K VASFRFI
Sbjct: 224 GQYVEEDTDKYASKVQKVVASFRFI 248
>gi|255646871|gb|ACU23906.1| unknown [Glycine max]
Length = 244
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/145 (78%), Positives = 131/145 (90%), Gaps = 2/145 (1%)
Query: 103 DWQLGAG--EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSG 160
+WQ+G G E +GFKSITAFYP AS+S+VSVVITG GPDFTRMESFGKV+ FA TLVSG
Sbjct: 100 EWQVGTGDGESSGFKSITAFYPTVASNSNVSVVITGPGPDFTRMESFGKVDEFAQTLVSG 159
Query: 161 LDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVT 220
LDRSWR+PPGVAAKLIDCK+S G YYIEY+LQNPGESR++L+SAIGMASNGWYNRLYTVT
Sbjct: 160 LDRSWRKPPGVAAKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVT 219
Query: 221 GQFVEEESEKYGSNIEKAVASFRFI 245
GQ+VEEE++KY S ++K VASFRFI
Sbjct: 220 GQYVEEETDKYASKVQKVVASFRFI 244
>gi|357467177|ref|XP_003603873.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492921|gb|AES74124.1| PsbP domain-containing protein [Medicago truncatula]
Length = 253
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 146/203 (71%), Gaps = 34/203 (16%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAND----------------------WQLGAGEPNGF 114
RR+++ + A + + S ALA ND WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 115 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 174
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 175 LIDCKASK------------GFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 222
LIDCK+SK GFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ
Sbjct: 171 LIDCKSSKVLTASLPRKNGSGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQ 230
Query: 223 FVEEESEKYGSNIEKAVASFRFI 245
+ EEE++KY S I+KAV SF+FI
Sbjct: 231 YGEEETDKYASKIQKAVRSFKFI 253
>gi|115477246|ref|NP_001062219.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|42408803|dbj|BAD10064.1| thylakoid lumen protein, chloroplast precursor-like [Oryza sativa
Japonica Group]
gi|113624188|dbj|BAF24133.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|215686998|dbj|BAG90812.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201441|gb|EEC83868.1| hypothetical protein OsI_29855 [Oryza sativa Indica Group]
gi|222640852|gb|EEE68984.1| hypothetical protein OsJ_27910 [Oryza sativa Japonica Group]
Length = 242
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 124/144 (86%), Gaps = 2/144 (1%)
Query: 103 DWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
DW +GAGE +GFKS+TAFYP + + S+VSV ITG+GPDFT ++SFG V+AFA+TLV+GLD
Sbjct: 98 DWLIGAGEVSGFKSVTAFYPDQVADSNVSVAITGIGPDFTSLKSFGDVDAFAETLVNGLD 157
Query: 163 RSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 222
RSW+RPPGVAAKLI+ +A+ GFYYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ
Sbjct: 158 RSWKRPPGVAAKLINSRAANGFYYIEYTLQNPGEQRRHIVSAIGMAFNGWYNRLYTVTGQ 217
Query: 223 FVEEES--EKYGSNIEKAVASFRF 244
+++E+ +KY + IEK V SFRF
Sbjct: 218 YIDEDGDVDKYRAQIEKCVQSFRF 241
>gi|25373339|pir||C96792 unknown protein F14G6.5 [imported] - Arabidopsis thaliana
gi|6554474|gb|AAF16656.1|AC012394_5 unknown protein; 20843-19352 [Arabidopsis thaliana]
gi|12323974|gb|AAG51945.1|AC015450_6 unknown protein; 20920-22411 [Arabidopsis thaliana]
Length = 220
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 153/241 (63%), Gaps = 27/241 (11%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALAAND----WQLGAGEPNGFKSITAFYPQE 124
+D KRR+VM Q+A + P +S A A + +++ E N F E
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKF---------E 99
Query: 125 ASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGF 184
S VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW++P GV AKLID +ASKGF
Sbjct: 100 ISIPQVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQKPVGVTAKLIDSRASKGF 159
Query: 185 YYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 244
YYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +EES + S I+K V SFRF
Sbjct: 160 YYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDEESAEQSSKIQKTVKSFRF 219
Query: 245 I 245
I
Sbjct: 220 I 220
>gi|357141874|ref|XP_003572377.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Brachypodium distachyon]
Length = 352
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 122/143 (85%), Gaps = 2/143 (1%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 163
WQ+GAGE +GFK++TAF+P +A+ SSVSVVITG+GPDFT ++SFG V+AFA+ LV+GLDR
Sbjct: 209 WQMGAGEGSGFKNVTAFFPDKAADSSVSVVITGIGPDFTSLKSFGDVDAFAENLVTGLDR 268
Query: 164 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 223
SW+RP GV AKLID +AS G YYIEYTLQNPG+ R+H+ SAIGMA NGWYNRLYTVTGQ+
Sbjct: 269 SWQRPAGVTAKLIDSRASNGMYYIEYTLQNPGDKRRHIVSAIGMAFNGWYNRLYTVTGQY 328
Query: 224 VE--EESEKYGSNIEKAVASFRF 244
+E EES K+ IEK+V SF+F
Sbjct: 329 IEDDEESVKFKPQIEKSVKSFKF 351
>gi|226496587|ref|NP_001147730.1| LOC100281340 [Zea mays]
gi|195613364|gb|ACG28512.1| thylakoid lumen protein [Zea mays]
gi|224034069|gb|ACN36110.1| unknown [Zea mays]
gi|414869459|tpg|DAA48016.1| TPA: Thylakoid lumen protein isoform 1 [Zea mays]
gi|414869460|tpg|DAA48017.1| TPA: Thylakoid lumen protein isoform 2 [Zea mays]
Length = 256
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 123/143 (86%), Gaps = 2/143 (1%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT ++SFG V+AFA+ LV+GLD
Sbjct: 113 WLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTSLKSFGDVDAFAEGLVNGLD 172
Query: 163 RSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 222
RSW+RPPG+AAKLID +A+ G YY+EYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ
Sbjct: 173 RSWQRPPGLAAKLIDSRAANGLYYLEYTLQNPGERRRHIVSAIGMAFNGWYNRLYTVTGQ 232
Query: 223 FV-EEESEKYGSNIEKAVASFRF 244
++ +++SEKY IEKAV SFR
Sbjct: 233 YIDDDDSEKYRPQIEKAVGSFRL 255
>gi|116784465|gb|ABK23352.1| unknown [Picea sitchensis]
Length = 256
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 134/196 (68%), Gaps = 23/196 (11%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAAN-----------------------DWQLGAG 109
SR RR+ + Q+A + P VS A AA DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 110 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 169
+ +G +++TAFYP+ S+V+V+ITGL D+T+MESFG V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESFGTVDAFAETLVNSLDRSWKRPP 180
Query: 170 GVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 229
G AAKL++ K+ G YYIEY+LQ PGES+ HL SAIGMA NGWYNRLYTVTGQ++E+++
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQKPGESKIHLLSAIGMAMNGWYNRLYTVTGQYLEDDAG 240
Query: 230 KYGSNIEKAVASFRFI 245
KYGS IEK+++SFR +
Sbjct: 241 KYGSKIEKSISSFRLV 256
>gi|326518660|dbj|BAJ88359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/143 (66%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 163
WQ+GAGE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDR
Sbjct: 144 WQVGAGERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDR 203
Query: 164 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 223
SW+RP G+ AKLID KA+ G YYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ+
Sbjct: 204 SWQRPAGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHIVSAIGMAFNGWYNRLYTVTGQY 263
Query: 224 V--EEESEKYGSNIEKAVASFRF 244
+ +E+S Y IEK+V SF+F
Sbjct: 264 IDDDEDSAIYKPEIEKSVKSFKF 286
>gi|242082241|ref|XP_002445889.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
gi|241942239|gb|EES15384.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
Length = 253
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 123/144 (85%), Gaps = 3/144 (2%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT ++SFG V++FA+ LV+GLD
Sbjct: 109 WLVGAGEASGIKSVTAFYPEQAAADSNVSVAITGIGPDFTSLKSFGDVDSFAEGLVNGLD 168
Query: 163 RSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 222
RSW+RPPG+AAKLID +A+ G YY+EYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ
Sbjct: 169 RSWQRPPGLAAKLIDSRAANGLYYLEYTLQNPGERRRHIVSAIGMAFNGWYNRLYTVTGQ 228
Query: 223 FV--EEESEKYGSNIEKAVASFRF 244
++ +++SEKY IEKAV SFR
Sbjct: 229 YIDDDDDSEKYRPQIEKAVRSFRL 252
>gi|326501564|dbj|BAK02571.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 167
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/143 (66%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 163
WQ+GAGE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDR
Sbjct: 24 WQVGAGERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDR 83
Query: 164 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 223
SW+RP G+ AKLID KA+ G YYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ+
Sbjct: 84 SWQRPAGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHIVSAIGMAFNGWYNRLYTVTGQY 143
Query: 224 V--EEESEKYGSNIEKAVASFRF 244
+ +E+S Y IEK+V SF+F
Sbjct: 144 IDDDEDSAIYKPEIEKSVKSFKF 166
>gi|326512572|dbj|BAJ99641.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/143 (66%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 163
WQ+GAGE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDR
Sbjct: 101 WQVGAGERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDR 160
Query: 164 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 223
SW+RP G+ AKLID KA+ G YYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ+
Sbjct: 161 SWQRPAGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHIVSAIGMAFNGWYNRLYTVTGQY 220
Query: 224 V--EEESEKYGSNIEKAVASFRF 244
+ +E+S Y IEK+V SF+F
Sbjct: 221 IDDDEDSAIYKPEIEKSVKSFKF 243
>gi|215274041|gb|ACJ64918.1| unknown [Arachis diogoi]
Length = 110
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 105/110 (95%)
Query: 136 GLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPG 195
G+GPDFT+MESFGKVE FA+TL+ GLDRSW+RPPGVAAKLIDCK+SKGFYYIEY+LQNPG
Sbjct: 1 GVGPDFTKMESFGKVEEFAETLIGGLDRSWQRPPGVAAKLIDCKSSKGFYYIEYSLQNPG 60
Query: 196 ESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 245
ESR+ L+SAIGMASNGWYNRLYTVTGQFVEEE++KY S ++KAVASFRFI
Sbjct: 61 ESRRTLYSAIGMASNGWYNRLYTVTGQFVEEETDKYASKVKKAVASFRFI 110
>gi|168003549|ref|XP_001754475.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694577|gb|EDQ80925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 105/147 (71%)
Query: 99 LAANDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLV 158
L W G G+ +G + +TAFYP + ++V++VITGLG DFT + SFG + FA+ LV
Sbjct: 109 LVPQAWNRGEGKTSGQRKVTAFYPADGGLTNVNIVITGLGADFTSLGSFGTADNFAENLV 168
Query: 159 SGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYT 218
+ LDRSW++PPG A+L+DCK+ YY+EYT+Q GE ++HL S +G+ +NGW NRLYT
Sbjct: 169 NSLDRSWQKPPGQKARLVDCKSRADKYYVEYTIQRLGEQQRHLVSVVGIGNNGWVNRLYT 228
Query: 219 VTGQFVEEESEKYGSNIEKAVASFRFI 245
VTGQ+ EE+S KY +I K ++SF+ +
Sbjct: 229 VTGQYFEEDSAKYKQDINKIISSFKIL 255
>gi|302818180|ref|XP_002990764.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
gi|300141502|gb|EFJ08213.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
Length = 221
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 98/143 (68%), Gaps = 1/143 (0%)
Query: 103 DWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
DW G G+ G + + AF+P +A+ +V+V+IT LG DFT + S G V+AFA ++V +D
Sbjct: 78 DWIKGEGK-AGSRRVVAFHPSKATFPNVNVIITNLGADFTGIGSLGSVDAFAASVVGSMD 136
Query: 163 RSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 222
RS++RPPG AA+L++ + G YY++YT+Q PGE+++H FS G+ +Y +LYT TGQ
Sbjct: 137 RSYKRPPGTAARLVNAVSRNGMYYLDYTVQTPGEAQRHFFSVAGVGETQFYKQLYTATGQ 196
Query: 223 FVEEESEKYGSNIEKAVASFRFI 245
+ E + ++ +++A+ SFR +
Sbjct: 197 YWEADGDRDRKALQEAIESFRIV 219
>gi|116782591|gb|ABK22563.1| unknown [Picea sitchensis]
Length = 208
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 87/143 (60%), Gaps = 23/143 (16%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAAN-----------------------DWQLGAG 109
SR RR+ + Q+A + P VS A AA DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 110 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 169
+ +G +++TAFYP+ S+V+V+ITGL D+T+MES G V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESLGTVDAFAETLVNSLDRSWKRPP 180
Query: 170 GVAAKLIDCKASKGFYYIEYTLQ 192
G AAKL++ K+ G YYIEY+LQ
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQ 203
>gi|413953068|gb|AFW85717.1| hypothetical protein ZEAMMB73_055926 [Zea mays]
Length = 277
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 77/120 (64%), Gaps = 25/120 (20%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
W +GAGE +G KS+TAFYP++A++ S+VSV I +GPDFT ++SFG V AFA+ LV
Sbjct: 145 WLVGAGEASGIKSVTAFYPEQAATDSNVSVAIIEIGPDFTSLKSFGDVAAFAEGLVR--- 201
Query: 163 RSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 222
YY+EYT QNPGE R+H+ SAIGMA NGWYNRLY TGQ
Sbjct: 202 ---------------------LYYLEYTSQNPGERRRHIVSAIGMAFNGWYNRLYIATGQ 240
>gi|356577616|ref|XP_003556920.1| PREDICTED: LOW QUALITY PROTEIN: psbP domain-containing protein 3,
chloroplastic-like [Glycine max]
Length = 113
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 103 DWQLGA--GEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSG 160
+WQ+G GE +GFKSITAFYP AS+S+VSVVITGLGP+FTRMESFGKV FA TLVSG
Sbjct: 35 EWQVGTRDGESSGFKSITAFYPTVASNSNVSVVITGLGPNFTRMESFGKVGEFAQTLVSG 94
Query: 161 LDRSWRRPPGVAAKLIDCK 179
LD S R+P GVAAKLI CK
Sbjct: 95 LDGSXRKPSGVAAKLIHCK 113
>gi|384245846|gb|EIE19338.1| hypothetical protein COCSUDRAFT_58632 [Coccomyxa subellipsoidea
C-169]
Length = 191
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 113 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGV- 171
G + A+YP+ + ++V+V++T +G D+T + SFG ++F + L++ LDRS+ G+
Sbjct: 49 GTRRALAWYPEGGTDTNVTVLVTNVGADYTALGSFGSADSFGENLIASLDRSFLLRGGMN 108
Query: 172 ----AAKLIDCKASKGFYYIEYTLQNPGE-SRKHLFSAIGMASNGWYNRLYTVTGQFVEE 226
AKL+D K+ G Y++EYT+Q P E +H SA+ + NG YNR YT+T Q E
Sbjct: 109 RPQSRAKLLDAKSRSGMYFLEYTVQKPEEIEPRHFLSAVALGFNGRYNRFYTLTAQCPEA 168
Query: 227 ESEKYGSNIEKAVASFR 243
+ Y + +E V SFR
Sbjct: 169 DLSTYRATLEGVVNSFR 185
>gi|357467181|ref|XP_003603875.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492923|gb|AES74126.1| PsbP domain-containing protein [Medicago truncatula]
Length = 174
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 22/110 (20%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAND----------------------WQLGAGEPNGF 114
RR+++ + A + + S ALA ND WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 115 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRS 164
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLV LD++
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVLFLDQN 160
>gi|159480798|ref|XP_001698469.1| hypothetical protein CHLREDRAFT_205923 [Chlamydomonas reinhardtii]
gi|158282209|gb|EDP07962.1| predicted protein [Chlamydomonas reinhardtii]
Length = 258
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 21/161 (13%)
Query: 103 DWQLGAGEPNGFKSIT---------AFYPQEASSSSVSVVIT--GLGPDFTRMESFGKVE 151
+W G G+ +G S + A++P+ S V+V IT + +FT++ SFG
Sbjct: 91 NWGFGEGQLSGNSSFSGASGARRTLAWFPENVSPRDVNVTITVTNVSVEFTKLGSFGTPL 150
Query: 152 AFADTLVSGLDRSW---------RRPPGVAAKLIDCKASKGFYYIEYTLQN-PGESRKHL 201
FA LV+ DRS+ R P + AKLID Y++EYTLQ P E ++HL
Sbjct: 151 QFASNLVNSQDRSYMLRGPEWARRNEPIMVAKLIDAGEISNKYFLEYTLQKVPDEPKRHL 210
Query: 202 FSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 242
++A+ + NG YNRLY+VT Q +EE +Y + + V S
Sbjct: 211 YTAVALGYNGTYNRLYSVTAQSLEELKPQYEATLLAMVKSL 251
>gi|307103403|gb|EFN51663.1| hypothetical protein CHLNCDRAFT_139877 [Chlorella variabilis]
Length = 295
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 113 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRS-------W 165
G + + AF P++ SV+V I LG D+T + SFG + FA +V+ +D S W
Sbjct: 148 GLRRVVAFLPEDKPEVSVAVTIQFLGADYTGLGSFGTAQDFATGVVNKMDNSYILKLPEW 207
Query: 166 RR---PPGVAAKLIDCK-ASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTG 221
RR PP AKL+D K K Y YTL GE+++ ++ A+ + +NG NR YTV
Sbjct: 208 RRAKEPPVQVAKLLDVKDVDKRQYMFAYTLAKEGEAQRTVYQAVAVGNNGRTNRFYTVNA 267
Query: 222 QFVEEESEKYGSNIEKAVASFR 243
+ E+YG ++K V SFR
Sbjct: 268 SCAGADVEQYGPVLQKIVESFR 289
>gi|255083562|ref|XP_002504767.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
gi|226520035|gb|ACO66025.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
Length = 248
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 97 YALAA-NDWQLGAGE----PNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVE 151
Y+LA +DW+ G+ P + + AFYP +V+VV T LG D+ +M SFG +
Sbjct: 88 YSLAVPSDWERALGDTSPNPQSTRKVIAFYPPGQPEINVNVVATALGADYPKMGSFGSPD 147
Query: 152 AFADTLVSGLDRS-WRRPPGVAAKLIDCKASKGFYYIEYTLQNPGES-RKHLFSAIGMAS 209
FA + +G+ R R+ P + ++D K + Y IEYT++ P E+ +HL SA+G+
Sbjct: 148 EFAYGVAAGMTRPKPRQGPKQFSYVVDAKNAGDRYVIEYTVERPEENFYQHLLSAVGIGY 207
Query: 210 NGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 242
NG NRL+T+T E+ + K A+F
Sbjct: 208 NGRVNRLFTLTAVCPEDRYAEMEPMFRKIFATF 240
>gi|414869461|tpg|DAA48018.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
gi|414869462|tpg|DAA48019.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
Length = 178
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Query: 104 WQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTRMESFGKVEAFADTLV 158
W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT ++SFG V+AFA+ LV
Sbjct: 113 WLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTSLKSFGDVDAFAEGLV 168
>gi|303283586|ref|XP_003061084.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457435|gb|EEH54734.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 265
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 103 DWQLGAG----EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLV 158
DW+ G P + +TA++P +V+VV T LG D+ +M SFG + FA +
Sbjct: 112 DWEQAIGTTDDNPQSSRRVTAYFPPGDPDINVNVVCTALGADYPKMGSFGSPDEFAFGVA 171
Query: 159 SGLDRSWRRP-PGVAAKLIDCKASKGFYYIEYTLQNPGES-RKHLFSAIGMASNGWYNRL 216
+G+ R + P + +++ K+ Y+IEYT++ P E +HL S +G+ NG +RL
Sbjct: 172 AGMTRPKPKSGPKQFSYVLNAKSKGDKYFIEYTVERPSEDFYQHLMSVVGVGYNGRVSRL 231
Query: 217 YTVTGQFVEEE 227
T T E++
Sbjct: 232 ITATAVCPEDK 242
>gi|302849364|ref|XP_002956212.1| hypothetical protein VOLCADRAFT_97118 [Volvox carteri f.
nagariensis]
gi|300258515|gb|EFJ42751.1| hypothetical protein VOLCADRAFT_97118 [Volvox carteri f.
nagariensis]
Length = 205
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 171 VAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEK 230
V AKL+D G Y++EYT+Q E ++HL+S + + NG YNRLYT+T Q +E + +
Sbjct: 89 VVAKLVDATELSGRYFVEYTVQKLPEPQRHLYSLLALGYNGMYNRLYTITAQTLEGDRPQ 148
Query: 231 YGSNIEKAVASF 242
Y + + V S
Sbjct: 149 YEAALLSMVKSL 160
>gi|412985511|emb|CCO18957.1| predicted protein [Bathycoccus prasinos]
Length = 319
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 96 SYALAANDWQL------GAGEPNGFKSITAFYPQEASSSSV--SVVITGLGPDFTRMESF 147
S + + WQL G+G+ +G + + AF P+ A+ V S+V T +G D+ +M SF
Sbjct: 152 SLSYPTDSWQLLVGETGGSGDRSGSRQVIAFAPKNANPKDVNISLVATPVGADYPKMGSF 211
Query: 148 GKVEAFADTLVSGLDR----SWRRPPGVAAKLIDCKASKGF-YYIEYTLQNP--GESRKH 200
G F +V+ +++ R ++LI+ SKG Y++EY L P G K
Sbjct: 212 GSPFEFGYNMVNPMNKPKAKKGREDEVQYSELIEA-GSKGLNYFVEYELTRPSTGIDSKQ 270
Query: 201 LFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 242
L A G+ +G + LY+ T Q + E EK+ IEK + S
Sbjct: 271 LVVA-GIGYDGRVSHLYSTTAQMPKGEEEKWRPEIEKILESL 311
>gi|308799735|ref|XP_003074648.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
gi|116000819|emb|CAL50499.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
Length = 195
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 122 PQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR----SWRRPPGVAAKLID 177
P +V+VV T G DFT+M S G F LV+ L R R A+L+D
Sbjct: 62 PGRTRDVNVTVVATPAGADFTKMGSLGDAYGFGMGLVAPLHRPKLKKGREDRVQRAELVD 121
Query: 178 CKASKGFYYIEYTLQNPGESRKHLFSAI-GMASNGWYNRLYTVTGQFVEEESEKYGSNIE 236
+Y +EYT + P +F + G+ +G LYT T QF E K+ + IE
Sbjct: 122 AYGKGDYYKVEYTFERPAADIDSVFLVLAGLGYDGRVGHLYTTTAQFPRAEESKWRAQIE 181
Query: 237 KAVASFRF 244
V S ++
Sbjct: 182 AIVDSVKY 189
>gi|414869463|tpg|DAA48020.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
Length = 40
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Query: 207 MASNGWYNRLYTVTGQFV-EEESEKYGSNIEKAVASFRF 244
MA NGWYNRLYTVTGQ++ +++SEKY IEKAV SFR
Sbjct: 1 MAFNGWYNRLYTVTGQYIDDDDSEKYRPQIEKAVGSFRL 39
>gi|145341129|ref|XP_001415667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575890|gb|ABO93959.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 192
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 102 NDWQLGAGEP--------NGFKSITAFYPQEASSSSVSVVI--TGLGPDFTRMESFGKVE 151
+DW GE G + + P A++ V+V I T G DFT+M S G
Sbjct: 29 SDWTTSTGETPASEEILGGGARDLFTISPPGANARDVNVTIVATPAGADFTKMGSLGDAY 88
Query: 152 AFADTLVSGLDRSWRRPPGVA-----AKLIDCKASKGFYYIEYTLQNPGESRKHLFSAI- 205
F LV L++ R G A+LID +Y +EY P +F +
Sbjct: 89 GFGYGLVVPLNKP-RAKKGQEDRIQFAELIDSVGKGDYYKVEYKFAKPSTGINSIFFVLA 147
Query: 206 GMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 244
G+ +G + LYT T Q+ E +K+ + +E + S +
Sbjct: 148 GLGYDGRVSHLYTATAQYPRAEEDKWRAQVEAIIDSVVY 186
>gi|255542694|ref|XP_002512410.1| conserved hypothetical protein [Ricinus communis]
gi|223548371|gb|EEF49862.1| conserved hypothetical protein [Ricinus communis]
Length = 268
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 115 KSITAFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAA 173
+ + AF P +S +VSV+++ + PDF+ +E+FG E + +V + S RR P V
Sbjct: 137 EPVVAFGPPGSSGELNVSVIVSPVPPDFS-IEAFGGPEEVGEAVVKTITASGRR-PDVKG 194
Query: 174 KLI------DCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEE 227
L+ D + +Y +E+ +++P R ++ A+ +G RLYT+ Q E
Sbjct: 195 SLVQSRLREDSLRNVNYYELEFRVESPSFQRHNV--AVCCTRDG---RLYTLNAQAPESA 249
Query: 228 SEKYGSNIEKAVASFRFI 245
+K + + SF +
Sbjct: 250 WQKVSPDFSRIAESFTLL 267
>gi|226531512|ref|NP_001142529.1| uncharacterized protein LOC100274771 [Zea mays]
gi|195605962|gb|ACG24811.1| hypothetical protein [Zea mays]
Length = 282
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 17/128 (13%)
Query: 108 AGEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ +
Sbjct: 139 GGSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIA 197
Query: 163 RSWRRPPGVAAKLIDCKASKG-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLY 217
R+ RR PG+ A LID + +Y +E+ +++P R ++ A+ +G RLY
Sbjct: 198 RT-RRSPGINATLIDAAVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLY 251
Query: 218 TVTGQFVE 225
T+ Q E
Sbjct: 252 TMNAQAPE 259
>gi|242055511|ref|XP_002456901.1| hypothetical protein SORBIDRAFT_03g045040 [Sorghum bicolor]
gi|241928876|gb|EES02021.1| hypothetical protein SORBIDRAFT_03g045040 [Sorghum bicolor]
Length = 279
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 107 GAGEPNGFKSITAFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSW 165
G N + + AF P +S +VSV+++ + DF+ +E+FG + + ++ + R+
Sbjct: 139 GKSPRNISEPVAAFGPPGSSGELNVSVIVSPVPRDFS-IEAFGSPKDVGEVVLRRIART- 196
Query: 166 RRPPGVAAKLIDCKA-----SKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVT 220
RR P + A LID S +Y +E+ +++P R ++ A+ A +G +LYT+
Sbjct: 197 RRSPDINATLIDAALREDADSVKYYKLEFRVESPSFQRHNV--AVCCARDG---KLYTMN 251
Query: 221 GQFVE 225
Q E
Sbjct: 252 AQAPE 256
>gi|298709150|emb|CBJ31094.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 230
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 102 NDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGL 161
+ W+ E +G + I + ++ V T DFT + SFG ++ + T++
Sbjct: 95 DGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLP-- 152
Query: 162 DRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSA-IGMASNGWYNRLYTVT 220
GV++++++ K Y +Y + G KH+ + + G +L T+T
Sbjct: 153 -----EASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQG---QLATIT 204
Query: 221 GQFVEEESEKYGSNIEKAVAS 241
Q E + K G I+ +AS
Sbjct: 205 AQCNESDYAKVGKTIDSLIAS 225
>gi|414878822|tpg|DAA55953.1| TPA: hypothetical protein ZEAMMB73_857058 [Zea mays]
Length = 283
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 108 AGEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ +
Sbjct: 140 GGSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIA 198
Query: 163 RSWRRPPGVAAKLIDCKASKG-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLY 217
R+ RR P + A LID + +Y +E+ +++P R ++ A+ +G RLY
Sbjct: 199 RT-RRSPDINATLIDAAVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLY 252
Query: 218 TVTGQFVE 225
T+ Q E
Sbjct: 253 TMNAQAPE 260
>gi|259490126|ref|NP_001159068.1| uncharacterized protein LOC100304114 [Zea mays]
gi|195650741|gb|ACG44838.1| hypothetical protein [Zea mays]
Length = 282
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 17/128 (13%)
Query: 108 AGEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 162
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ +
Sbjct: 139 GGSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIA 197
Query: 163 RSWRRPPGVAAKLIDCKASKG-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLY 217
R+ RR P + A LID + +Y +E+ +++P R ++ A+ +G RLY
Sbjct: 198 RT-RRSPDINATLIDAXVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLY 251
Query: 218 TVTGQFVE 225
+ Q E
Sbjct: 252 XMNAQAPE 259
>gi|33240547|ref|NP_875489.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33238075|gb|AAQ00142.1| Photosystem II protein P PsbP [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 185
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 23/161 (14%)
Query: 98 ALAANDWQLGAGEPNGFKSIT-------AFYPQEASSSSVSVVITGLGPDFTRMESFGKV 150
A +ND + G P G+ IT F+ S ++S+VI+ + D +E+ G
Sbjct: 34 AFQSNDGRYGFFYPTGWTRITLKGGPEVVFHDLINSDETLSLVISDISAD-VELENMGSP 92
Query: 151 EAFADTLVSGLDRSWRRPPG--VAAKLIDCKA----SKGFYYIEYTLQNPGESRKHLFSA 204
+ L++ L P G A+L+D K+ + FY IEY + P + R L +
Sbjct: 93 SEVGEKLMNNL----LAPNGGEREAELLDAKSRVADNHTFYDIEYLIHLPDKDRHELATV 148
Query: 205 IGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 245
+ G LYT + G E+ ++SF F+
Sbjct: 149 V--VDRG---SLYTFAAGTNDSRWNTVGDLFERVISSFVFL 184
>gi|443716926|gb|ELU08219.1| hypothetical protein CAPTEDRAFT_197539 [Capitella teleta]
Length = 457
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 115 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADT 156
K + + P AS S + ++T +GPD TR S G+ AF+DT
Sbjct: 198 KLVLGYLPSPASDSGAASILTLVGPDSTRRMSRGRYSAFSDT 239
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.130 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,785,325,678
Number of Sequences: 23463169
Number of extensions: 152176034
Number of successful extensions: 344398
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 344310
Number of HSP's gapped (non-prelim): 56
length of query: 245
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 106
effective length of database: 9,097,814,876
effective search space: 964368376856
effective search space used: 964368376856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)