Your job contains 1 sequence.
>025977
MASLQHSPSSSIHQTSFLNSLPQLGVQKYGGVLPAVCRRGISLIVKAEHASMASSANSLD
KCGRRQMIAVGVIAPWVSLVNQTPPSFAAESNKGFLSVTDKKDGYSFVYPFGWQEVIIEG
QDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAETLIKKFLAPPTQKTKIIAASEN
DVDGKAYYAFEFTAQAPNYIRHALGVVTVGNGKFYTLTTGANERRWGKMKDRLQTVIESF
KISNV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025977
(245 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100681 - symbol:PPL1 "PsbP-like protein 1" sp... 806 2.9e-80 1
TAIR|locus:2039727 - symbol:PnsL1 "Photosynthetic NDH su... 338 1.1e-30 1
TAIR|locus:2130295 - symbol:PPD1 "PsbP-Domain Protein1" s... 137 6.5e-09 2
TAIR|locus:2079792 - symbol:AT3G05410 species:3702 "Arabi... 131 2.0e-06 1
TAIR|locus:2033087 - symbol:PSBP-1 "photosystem II subuni... 85 4.3e-06 2
TAIR|locus:2011711 - symbol:AT1G76450 species:3702 "Arabi... 115 0.00012 1
TAIR|locus:2828415 - symbol:AT2G28605 species:3702 "Arabi... 111 0.00029 1
>TAIR|locus:2100681 [details] [associations]
symbol:PPL1 "PsbP-like protein 1" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009657 "plastid organization"
evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=RCA] InterPro:IPR002683 Pfam:PF01789 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019898 GO:GO:0005509
EMBL:AL132954 GO:GO:0031977 GO:GO:0015979 GO:GO:0009543
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
GO:GO:0009654 EMBL:AF419553 EMBL:AY097338 EMBL:AY087663
IPI:IPI00528004 PIR:PA0046 PIR:T47672 RefSeq:NP_191093.1
UniGene:At.27396 ProteinModelPortal:P82538 SMR:P82538 STRING:P82538
PaxDb:P82538 PRIDE:P82538 EnsemblPlants:AT3G55330.1 GeneID:824699
KEGG:ath:AT3G55330 TAIR:At3g55330 eggNOG:NOG08775
HOGENOM:HOG000232965 InParanoid:P82538 KO:K02717 OMA:GYEFLYP
PhylomeDB:P82538 ProtClustDB:CLSN2685283 Genevestigator:P82538
GermOnline:AT3G55330 Uniprot:P82538
Length = 230
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 157/243 (64%), Positives = 195/243 (80%)
Query: 1 MASLQHSPSSSIHQTSFLNSLPQLGVQKYGGVLPAVCRRGISLIVKAEHASMASSANSLD 60
MASL+ SPSS I S+ ++GV +P+ ++G+S +VKAEH S +SS++ D
Sbjct: 1 MASLKLSPSSPI-------SISKVGV------IPS-SKKGLSFLVKAEHHSSSSSSHLQD 46
Query: 61 KCGRRQMIAVGVIAPWVSLVNQTPPSFAAESNKGFLSVTDKKDGYSFVYPFGWQEVIIEG 120
KC RR ++ GV+APW+SL+++ P SFAAES KGFL+V+D KD Y+F+YPFGWQEV+IEG
Sbjct: 47 KCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVVIEG 106
Query: 121 QDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAETLIKKFLAPPTQKTKIIAASEN 180
QDKV+KDVIEPLESVSVNL+PT KQ I++FGPP+++AETLIKK LAPP QKT +I ASE+
Sbjct: 107 QDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEH 166
Query: 181 DVDGKAYYAFEFTAQAPNYIRHALGVVTVGNGKFYTLTTGANERRWGKMKDRLQTVIESF 240
DVDGK YY FEFT QA NY RHALG +TV NG FYTLTTGANERRW KMKDRL TV++SF
Sbjct: 167 DVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSF 226
Query: 241 KIS 243
KI+
Sbjct: 227 KIT 229
>TAIR|locus:2039727 [details] [associations]
symbol:PnsL1 "Photosynthetic NDH subcomplex L 1"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0016556 "mRNA modification" evidence=RCA] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] InterPro:IPR002683 Pfam:PF01789
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0019898 GO:GO:0005509
EMBL:AC004218 UniGene:At.37167 UniGene:At.63501 GO:GO:0009535
GO:GO:0015979 GO:GO:0009543 Gene3D:3.40.1000.10 InterPro:IPR016123
SUPFAM:SSF55724 GO:GO:0009654 HOGENOM:HOG000232965 EMBL:AY039968
EMBL:AY133798 EMBL:AY085632 IPI:IPI00518089 IPI:IPI00656679
IPI:IPI00846788 PIR:T00557 RefSeq:NP_001031514.2
RefSeq:NP_001078022.1 RefSeq:NP_565906.1 ProteinModelPortal:O80634
SMR:O80634 STRING:O80634 PaxDb:O80634 PRIDE:O80634
EnsemblPlants:AT2G39470.1 GeneID:818532 KEGG:ath:AT2G39470
TAIR:At2g39470 eggNOG:NOG283132 InParanoid:Q94BP9 OMA:YAAPNQI
PhylomeDB:O80634 ProtClustDB:CLSN2688805 Genevestigator:O80634
Uniprot:O80634
Length = 238
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 79/203 (38%), Positives = 105/203 (51%)
Query: 46 KAEHASMASSANSLDKCGRRQMIAVGVIAPWVSLVNQTPPS---FAAESNKGFLSVTDKK 102
KA+ + S + RRQ + VGV +LV + P+ A E K + D++
Sbjct: 41 KADSSESTYQKGSGNNWKRRQAL-VGV----GTLVATSIPATLLLAEEIPKSYSPFVDRE 95
Query: 103 DGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAETLIK 162
DGYS+ YP W+E D FKD L++V V IPT K DI + GP +EV L+K
Sbjct: 96 DGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVK 155
Query: 163 KFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVGNGKFYTLTTGAN 222
A P Q I E DGK YY FE+ + P Y + V VGN ++YTL GAN
Sbjct: 156 HKFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGAN 215
Query: 223 ERRWGKMKDRLQTVIESFKISNV 245
ERRW K+K +LQ V +S KI +
Sbjct: 216 ERRWRKVKKQLQVVADSLKILQI 238
>TAIR|locus:2130295 [details] [associations]
symbol:PPD1 "PsbP-Domain Protein1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009654 "oxygen evolving complex" evidence=ISS] [GO:0030095
"chloroplast photosystem II" evidence=ISS] [GO:0009543 "chloroplast
thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid lumen"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048564 "photosystem I assembly" evidence=IMP]
InterPro:IPR002683 Pfam:PF01789 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161541 GO:GO:0019898 GO:GO:0005509
GO:GO:0009535 GO:GO:0031977 GO:GO:0015979 EMBL:Z97339 GO:GO:0009543
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
EMBL:AY085014 EMBL:AK175561 IPI:IPI00526562 IPI:IPI00547165
IPI:IPI00657053 PIR:G71419 RefSeq:NP_001031646.1 RefSeq:NP_567468.1
RefSeq:NP_974555.1 UniGene:At.33171 ProteinModelPortal:O23403
SMR:O23403 DIP:DIP-58590N STRING:O23403 PaxDb:O23403 PRIDE:O23403
EnsemblPlants:AT4G15510.1 GeneID:827223 KEGG:ath:AT4G15510
TAIR:At4g15510 eggNOG:NOG329161 HOGENOM:HOG000242253
InParanoid:O23403 OMA:YPQNWIQ PhylomeDB:O23403 ProtClustDB:PLN00059
BioCyc:MetaCyc:AT4G15510-MONOMER Genevestigator:O23403
GO:GO:0009654 Uniprot:O23403
Length = 287
Score = 137 (53.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 54 SSANSLDKCGRRQMIAVGVIAPWVSLVNQT--PPSFAAESNKGFLSVTDKKDGYSFVYPF 111
+ A + GRR+ + +G++ + +V+Q P +FA S F D DGYSF YP
Sbjct: 69 TDAKQVCAVGRRKSMMMGLLMSGL-IVSQANLPTAFA--STPVFREYIDTFDGYSFKYPQ 125
Query: 112 GWQEVIIEGQDKVFKDVIEPLESVSVNLI-PTGKQ--DIRDFGPPQEVAETLIKKFLAP- 167
W +V G D F+D + E++SV P+ + D G P+EV + +++++L
Sbjct: 126 NWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEF 185
Query: 168 -PTQ-----KTKIIAASENDVD-GKAYYAFE 191
T+ + I++ S D GK YY E
Sbjct: 186 MSTRLGVKRQANILSTSSRVADDGKLYYQVE 216
Score = 50 (22.7 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 201 RHALGVVTVGNGKFYTLTTGANERRWGKMKDRLQTVIESFKISNV 245
R L V+ V N + Y++ E+ + + + L+ V++SF++ +
Sbjct: 243 RRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVEKI 287
>TAIR|locus:2079792 [details] [associations]
symbol:AT3G05410 species:3702 "Arabidopsis thaliana"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM] [GO:0009523 "photosystem II"
evidence=IEA] [GO:0009654 "oxygen evolving complex" evidence=IEA]
[GO:0015979 "photosynthesis" evidence=IEA] [GO:0019898 "extrinsic
to membrane" evidence=IEA] InterPro:IPR002683 Pfam:PF01789
EMBL:CP002686 GO:GO:0019898 GO:GO:0005509 GO:GO:0015979
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
GO:GO:0009654 IPI:IPI00938794 RefSeq:NP_001154592.1
UniGene:At.40675 PRIDE:F4J7A7 EnsemblPlants:AT3G05410.2
GeneID:819705 KEGG:ath:AT3G05410 OMA:QAPESAW Uniprot:F4J7A7
Length = 280
Score = 131 (51.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 134 SVSVNLIPTGKQ-DIRDFGPPQEVAETLIKKFLAPPTQ---KTKIIAAS-ENDVDGKA-Y 187
+VSV + P I FG P+EV E +++ + K ++ +S D + Y
Sbjct: 164 NVSVIVSPVSPSFSIEAFGGPKEVGEAIVRTVTGSGQRADLKGTLLESSIRQDSERNLKY 223
Query: 188 YAFEFTAQAPNYIRHALGVVTVGNGKFYTLTTGANERRWGKMKDRLQTVIESFKI 242
Y EF ++P + RH + V +G+ YTL A E W ++K + T +SF I
Sbjct: 224 YELEFKVESPLFRRHNVAVCCAHSGRLYTLNAQAPESAWSEVKSEIYTTAKSFNI 278
>TAIR|locus:2033087 [details] [associations]
symbol:PSBP-1 "photosystem II subunit P-1" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009543 "chloroplast thylakoid lumen" evidence=ISS;IDA]
[GO:0009654 "oxygen evolving complex" evidence=ISS] [GO:0015979
"photosynthesis" evidence=IEA] [GO:0030095 "chloroplast photosystem
II" evidence=ISS] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0019898 "extrinsic to membrane" evidence=TAS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IEP;RCA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009409 "response to cold"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009637 "response to blue light" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0009697
"salicylic acid biosynthetic process" evidence=RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] [GO:0009773
"photosynthetic electron transport in photosystem I" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010114 "response to red light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0010200
"response to chitin" evidence=RCA] [GO:0010207 "photosystem II
assembly" evidence=RCA] [GO:0010218 "response to far red light"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA;TAS] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR002683
Pfam:PF01789 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570
GO:GO:0008266 GO:GO:0019898 GO:GO:0048046 GO:GO:0042742
GO:GO:0005509 GO:GO:0009941 EMBL:AC007592 GO:GO:0009535
GO:GO:0031977 UniGene:At.23738 GO:GO:0009543 GO:GO:0019684
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
GO:GO:0009654 KO:K02717 UniGene:At.3352 EMBL:X98108 EMBL:AY056416
EMBL:AY070469 EMBL:AY074308 EMBL:AY096487 EMBL:AY087305 EMBL:Z25620
IPI:IPI00540742 IPI:IPI00891781 PIR:JC5271 RefSeq:NP_001117239.1
RefSeq:NP_172153.1 UniGene:At.42209 UniGene:At.47605
ProteinModelPortal:Q42029 SMR:Q42029 IntAct:Q42029 STRING:Q42029
SWISS-2DPAGE:Q42029 PaxDb:Q42029 PRIDE:Q42029 ProMEX:Q42029
DNASU:837178 EnsemblPlants:AT1G06680.1 GeneID:837178
KEGG:ath:AT1G06680 TAIR:At1g06680 eggNOG:NOG318473
HOGENOM:HOG000242124 InParanoid:Q42029 OMA:MASTSCF PhylomeDB:Q42029
ProtClustDB:PLN00042 Genevestigator:Q42029 GermOnline:AT1G06680
Uniprot:Q42029
Length = 263
Score = 85 (35.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 174 IIAASENDVDGKAYYAFEF---TAQAPNYIRHALGVVTVGNGKFYTLTTGANERRWGK-M 229
I+ +S +V GK YY TA +H L TV GK Y A ++RW K
Sbjct: 190 ILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGA 249
Query: 230 KDRLQTVIESFKIS 243
+ +++ SF ++
Sbjct: 250 RKFVESAATSFSVA 263
Score = 84 (34.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 90 ESNKGFLSVTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQD 146
++N FL DG+ P W +E+ GQ F+D + +++V + PT K+
Sbjct: 90 KTNTDFLPYNG--DGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKS 147
Query: 147 IRDFGPPQE 155
I D+G P+E
Sbjct: 148 ITDYGSPEE 156
>TAIR|locus:2011711 [details] [associations]
symbol:AT1G76450 species:3702 "Arabidopsis thaliana"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0015979 "photosynthesis"
evidence=IEA;RCA] [GO:0009543 "chloroplast thylakoid lumen"
evidence=IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0000023 "maltose metabolic
process" evidence=RCA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010114 "response to red
light" evidence=RCA] [GO:0010218 "response to far red light"
evidence=RCA] [GO:0015995 "chlorophyll biosynthetic process"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
InterPro:IPR002683 Pfam:PF01789 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0019898 GO:GO:0005509 EMBL:AC012394
GO:GO:0009535 GO:GO:0031977 GO:GO:0015979 EMBL:AC015450
GO:GO:0009543 Gene3D:3.40.1000.10 InterPro:IPR016123
SUPFAM:SSF55724 GO:GO:0009654 EMBL:BT009723 EMBL:AY084993
EMBL:AK227301 IPI:IPI00538962 RefSeq:NP_565131.1 UniGene:At.43912
UniGene:At.70089 ProteinModelPortal:Q9S720 STRING:Q9S720
PaxDb:Q9S720 PRIDE:Q9S720 EnsemblPlants:AT1G76450.1 GeneID:843978
KEGG:ath:AT1G76450 TAIR:At1g76450 eggNOG:NOG271581
HOGENOM:HOG000029524 InParanoid:Q9S720 OMA:AKLIDSR PhylomeDB:Q9S720
ProtClustDB:CLSN2917457 BioCyc:MetaCyc:AT1G76450-MONOMER
Genevestigator:Q9S720 GermOnline:AT1G76450 Uniprot:Q9S720
Length = 247
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 51/201 (25%), Positives = 88/201 (43%)
Query: 57 NSLDKCG-RRQMIAVGVIAPWVSLVNQTPPSFA-AESNKGFLSVTDKKDGYSFVYPFGWQ 114
+S D G +R+ + + + + L P+FA +++ F TD+ + + P WQ
Sbjct: 48 SSRDHVGMKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQ 107
Query: 115 EVIIEGQDKVFKDVIE--PLES----VSVNLIPTGKQDIR--DFGPPQEVAETLIKKFLA 166
+ + + FK + P E+ VS+ + G R FG + AETL+ L
Sbjct: 108 --VGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSG-LD 164
Query: 167 PPTQKTKIIAASENDVDG-KAYYAFEFTAQAPNYIR-H---ALGVVTVG-NGKFYTLTTG 220
QK + A D K +Y E+T Q P R H A+G+ T G + YT+T
Sbjct: 165 RSWQKPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQ 224
Query: 221 ANERRWGKMKDRLQTVIESFK 241
+ + ++Q ++SF+
Sbjct: 225 FTDEESAEQSSKIQKTVKSFR 245
>TAIR|locus:2828415 [details] [associations]
symbol:AT2G28605 species:3702 "Arabidopsis thaliana"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009523 "photosystem II"
evidence=IEA] [GO:0009654 "oxygen evolving complex" evidence=IEA]
[GO:0015979 "photosynthesis" evidence=IEA] [GO:0019898 "extrinsic
to membrane" evidence=IEA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR002683
Pfam:PF01789 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0019898 GO:GO:0005509 GO:GO:0009579 GO:GO:0015979
GO:GO:0009543 EMBL:AC007171 Gene3D:3.40.1000.10 InterPro:IPR016123
SUPFAM:SSF55724 GO:GO:0009654 EMBL:AY072442 EMBL:AY128884
IPI:IPI00520894 RefSeq:NP_850123.1 UniGene:At.38598 HSSP:P18212
ProteinModelPortal:Q8VY52 SMR:Q8VY52 STRING:Q8VY52 PaxDb:Q8VY52
PRIDE:Q8VY52 EnsemblPlants:AT2G28605.1 GeneID:817409
KEGG:ath:AT2G28605 TAIR:At2g28605 eggNOG:NOG300660
HOGENOM:HOG000006006 InParanoid:Q8VY52 OMA:FEYKIDS PhylomeDB:Q8VY52
ProtClustDB:CLSN2690972 Genevestigator:Q8VY52 Uniprot:Q8VY52
Length = 232
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 89 AESNKGFLSVTDKKDGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIR 148
A+S + TD +G++ + P + +V G + +F+++ ++ V + P + +
Sbjct: 69 AKSMEELQRYTDSNNGFTLLIPSSYTKVEKAGANALFEELNNGSNNIGVVVSPVRIKSLD 128
Query: 149 DFGPPQEVAETLIK-KFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNY-IRHALGV 206
FG PQ VA+ LI + T++ ++++ E G+ Y FE+ + I+
Sbjct: 129 QFGSPQFVADKLINAEKRKESTKEAEVVSVGERAGLGQQVYEFEYKIDSTRGGIKRVFSA 188
Query: 207 VTVGNGKFYTL 217
V + K Y L
Sbjct: 189 AFVSSNKLYLL 199
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 245 245 0.00099 113 3 11 22 0.46 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 594 (63 KB)
Total size of DFA: 177 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.63u 0.11s 20.74t Elapsed: 00:00:01
Total cpu time: 20.63u 0.11s 20.74t Elapsed: 00:00:01
Start: Sat May 11 10:43:45 2013 End: Sat May 11 10:43:46 2013