Query 025978
Match_columns 245
No_of_seqs 155 out of 1619
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 21:55:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lck_A Mitochondrial uncouplin 100.0 1.1E-51 3.6E-56 340.2 24.0 235 2-240 52-288 (303)
2 1okc_A ADP, ATP carrier protei 100.0 7.7E-50 2.6E-54 328.3 22.9 233 2-238 55-297 (297)
3 1okc_A ADP, ATP carrier protei 100.0 1.6E-38 5.5E-43 260.9 20.4 188 54-241 5-204 (297)
4 2lck_A Mitochondrial uncouplin 100.0 4E-38 1.4E-42 259.2 19.0 182 59-241 4-195 (303)
5 3tgu_G UQCRQ, mitochondrial ub 39.9 53 0.0018 20.5 4.3 36 205-240 33-68 (81)
6 3f2e_A SIRV coat protein; four 39.8 16 0.00054 22.5 1.8 34 188-221 6-43 (100)
7 1pp9_G Ubiquinol-cytochrome C 31.8 80 0.0027 19.7 4.2 37 204-240 32-68 (81)
8 3tgu_G UQCRQ, mitochondrial ub 21.9 1.5E+02 0.0052 18.4 4.2 40 112-151 32-71 (81)
9 3cx5_H Cytochrome B-C1 complex 14.7 1.5E+02 0.0051 19.0 2.9 36 204-239 42-77 (93)
10 2l5r_A Antimicrobial peptide a 14.5 92 0.0031 14.1 1.4 19 198-217 3-21 (26)
No 1
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=1.1e-51 Score=340.20 Aligned_cols=235 Identities=48% Similarity=0.826 Sum_probs=215.2
Q ss_pred hhHHHHHhhhhhhHhhcchhHHHHHHHhhhhhhhhccHHHHHhhccCCCCCCCcHHHHHHHHHHHhHhHhhhcChHHHHH
Q 025978 2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVK 81 (245)
Q Consensus 2 ~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pl~~ik 81 (245)
+++++|+++||++|||||+.+++++.++..+++|.+||.+++.+.+... ..+....+++|++||+++.++++|+|+||
T Consensus 52 ~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vk 129 (303)
T 2lck_A 52 GTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQPTDVVK 129 (303)
T ss_dssp HHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCS--SCCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--CCcHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 6789999999999999999999999999999999999999998865421 46778999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCccccchHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 025978 82 VRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHIL 161 (245)
Q Consensus 82 ~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (245)
+|+|++... +...+|+++++++++|+++||+++||||+.|++++.++..+++|.+||.+++.+.+....+++....++
T Consensus 130 trlq~~~~~--~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~ 207 (303)
T 2lck_A 130 VRFQAQARA--GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFT 207 (303)
T ss_dssp HHHHHSCSC--CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHH
T ss_pred HHHhccccc--CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence 999998642 223478999999999999999999999999999999999999999999999988765444567788999
Q ss_pred HHHHHHHHHHhhcCcHHHHHHhhcCC--CCCCCHHHHHHHHHHhhchhhhhcchhHHHHhhhhhHHHHHHHHHHHHHHHh
Q 025978 162 AGLGAGLFAVCIGSPIDVVKSRMMGD--SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 239 (245)
Q Consensus 162 ~~~~a~~~~~~~~~Pld~i~~r~q~~--~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~ 239 (245)
+|+++|++++++++|+|+||+|+|.+ ..|.++++|+++|+++||++|||||+.++++|.+|.++++|.+||.+|+.+.
T Consensus 208 ~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~ 287 (303)
T 2lck_A 208 SAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 287 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 4599999999999999999999999999999999999999999999998775
Q ss_pred h
Q 025978 240 R 240 (245)
Q Consensus 240 ~ 240 (245)
+
T Consensus 288 ~ 288 (303)
T 2lck_A 288 A 288 (303)
T ss_dssp C
T ss_pred H
Confidence 4
No 2
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=7.7e-50 Score=328.30 Aligned_cols=233 Identities=26% Similarity=0.369 Sum_probs=202.1
Q ss_pred hhHHHHHhhhhhhHhhcchhHHHHHHHhhhhhhhhccHHHHHhh-ccCCCCCC--CcHHHHHHHHHHHhHhHhhhcChHH
Q 025978 2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFL-VGSDFVGD--IPLYQKIFAALLTGAIAIVVANPTD 78 (245)
Q Consensus 2 ~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~g~~a~~~~~~~~~Pl~ 78 (245)
+++++|+++||++|||||+.+++++.++.++++|.+||.+++.+ ...+.... .++...+++|++||+++.++++|+|
T Consensus 55 ~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld 134 (297)
T 1okc_A 55 DCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLD 134 (297)
T ss_dssp HHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccchhheecccHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 68899999999999999999999999999999999999999954 32222222 2346789999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCccccchHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCchHH
Q 025978 79 LVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFT 158 (245)
Q Consensus 79 ~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (245)
+||+|+|++... .+...+|+++++++++|+++||+++||||+.|++++.++.++++|.+||.+++.+.+. .+.+...
T Consensus 135 ~vktrlq~~~~~-~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~--~~~~~~~ 211 (297)
T 1okc_A 135 FARTRLAADVGK-GAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIV 211 (297)
T ss_dssp HHHHHHHHCCCS-STTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHH
T ss_pred HHHHHHhccccC-CCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC--CCccHHH
Confidence 999999998542 1223478999999999999999999999999999999999999999999999976442 2356778
Q ss_pred HHHHHHHHHHHHHhhcCcHHHHHHhhcCCC-------CCCCHHHHHHHHHHhhchhhhhcchhHHHHhhhhhHHHHHHHH
Q 025978 159 HILAGLGAGLFAVCIGSPIDVVKSRMMGDS-------AYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTL 231 (245)
Q Consensus 159 ~~~~~~~a~~~~~~~~~Pld~i~~r~q~~~-------~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~ 231 (245)
.+++|++++++++++++|+|+||+|+|.+. .|.++++|+++|+++||++|||||+.++++|. +.++++|.+|
T Consensus 212 ~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~y 290 (297)
T 1okc_A 212 SWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLY 290 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHH
Confidence 899999999999999999999999999872 58999999999999999999999999999995 5789999999
Q ss_pred HHHHHHH
Q 025978 232 EQAKKVF 238 (245)
Q Consensus 232 ~~~~~~~ 238 (245)
|.+|+++
T Consensus 291 e~~k~~l 297 (297)
T 1okc_A 291 DEIKKFV 297 (297)
T ss_dssp HTC----
T ss_pred HHHHhhC
Confidence 9998764
No 3
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=1.6e-38 Score=260.91 Aligned_cols=188 Identities=21% Similarity=0.367 Sum_probs=165.2
Q ss_pred CcHHHHHHHHHHHhHhHhhhcChHHHHHHHHhhcCCCC-CCCCccccchHHHHHHHHHhhhhhhhhcchhHHHHHHHHHH
Q 025978 54 IPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLP-SGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVN 132 (245)
Q Consensus 54 ~~~~~~~~~g~~a~~~~~~~~~Pl~~ik~r~q~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~ 132 (245)
.+....+++|++||+++.++++|+|++|+|+|++.... ......|+++++++++|+++||+++||||+.|++++.++..
T Consensus 5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~ 84 (297)
T 1okc_A 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 84 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence 45678999999999999999999999999999985321 12234689999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCCCCC----chHHHHHHHHHHHHHHHhhcCcHHHHHHhhcCC-------CCCCCHHHHHHHHH
Q 025978 133 AAELASYDQVKETILKIPGFTD----NIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD-------SAYKNTVDCFIKTL 201 (245)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~~~~~Pld~i~~r~q~~-------~~~~~~~~~~~~i~ 201 (245)
+++|.+||.+++.+.+..+.+. .....+++|+++|+++.++++|+|+||+|+|.+ ..|.++++|+++|+
T Consensus 85 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~ 164 (297)
T 1okc_A 85 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF 164 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHH
Confidence 9999999999996543322222 246789999999999999999999999999986 25889999999999
Q ss_pred HhhchhhhhcchhHHHHhhhhhHHHHHHHHHHHHHHHhhh
Q 025978 202 KYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIRE 241 (245)
Q Consensus 202 ~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (245)
++||++|||||+.++++|.+|.++++|.+||.+|+.+.+.
T Consensus 165 ~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~ 204 (297)
T 1okc_A 165 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP 204 (297)
T ss_dssp HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG
T ss_pred HhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999987543
No 4
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=4e-38 Score=259.20 Aligned_cols=182 Identities=30% Similarity=0.464 Sum_probs=165.1
Q ss_pred HHHHHHHHhHhHhhhcChHHHHHHHHhhcCCCCC----CCCccccchHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHhh
Q 025978 59 KIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPS----GVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAA 134 (245)
Q Consensus 59 ~~~~g~~a~~~~~~~~~Pl~~ik~r~q~~~~~~~----~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~ 134 (245)
.+++|++|++++.++++|+|+||+|+|++..... ....+|+++++++++|+++||+++||||+.|++++.++..++
T Consensus 4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i 83 (303)
T 2lck_A 4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV 83 (303)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999864211 113468999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHHHhhcCcHHHHHHhhcCCC------CCCCHHHHHHHHHHhhchhh
Q 025978 135 ELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDS------AYKNTVDCFIKTLKYEGFLA 208 (245)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~Pld~i~~r~q~~~------~~~~~~~~~~~i~~~~G~~~ 208 (245)
+|.+||.+++.+.+..+ ..+....+++|+++|+++.++++|+|+||+|+|.+. .|.+.++|+++|+++||++|
T Consensus 84 ~f~~ye~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~g 162 (303)
T 2lck_A 84 RIGLYDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRG 162 (303)
T ss_dssp TTTHHHHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhh
Confidence 99999999999865422 467788999999999999999999999999999874 68999999999999999999
Q ss_pred hhcchhHHHHhhhhhHHHHHHHHHHHHHHHhhh
Q 025978 209 FYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIRE 241 (245)
Q Consensus 209 ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (245)
||||+.++++|.+|..+++|.+||.+|+.+.+.
T Consensus 163 lyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~ 195 (303)
T 2lck_A 163 LWKGTSPNVARNAIVNCAELVTYDLIKDTLLKA 195 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred hhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999988654
No 5
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=39.90 E-value=53 Score=20.49 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=28.8
Q ss_pred chhhhhcchhHHHHhhhhhHHHHHHHHHHHHHHHhh
Q 025978 205 GFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 240 (245)
Q Consensus 205 G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (245)
|+-+.+|-+..+++..+|..++...+|+..++....
T Consensus 33 ~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~ 68 (81)
T 3tgu_G 33 ALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFER 68 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHH
Confidence 556666777788888999999999999998876643
No 6
>3f2e_A SIRV coat protein; four helix bundle, virus coat protein, viral protein; HET: CIT; 1.67A {Sulfolobus islandicus rudivirus 1 variorganism_taxid}
Probab=39.83 E-value=16 Score=22.49 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=22.2
Q ss_pred CCCCCHHHHHHHHHHhhch----hhhhcchhHHHHhhh
Q 025978 188 SAYKNTVDCFIKTLKYEGF----LAFYKGFLPNFSRLG 221 (245)
Q Consensus 188 ~~~~~~~~~~~~i~~~~G~----~~ly~G~~~~~~~~~ 221 (245)
+++.+.-+-...+..+-|+ +.+|+|++....|..
T Consensus 6 pkftsvne~vsavltqygvtgpnraiyqgfglkvaral 43 (100)
T 3f2e_A 6 PKFTAVAEQVSAVLSQYGITGPNRAIYQGFGLKVARAL 43 (100)
T ss_dssp --CHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhcCCCccHHHHhhhhHHHHHHH
Confidence 4555565666666777776 568899888877643
No 7
>1pp9_G Ubiquinol-cytochrome C reductase complex ubiquino protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.23.13.1 PDB: 1bgy_G* 1be3_G* 1l0n_G* 1ntk_G* 1ntm_G* 1ntz_G* 1nu1_G* 1l0l_G* 1ppj_G* 1sqb_G* 1sqp_G* 1sqq_G* 1sqv_G* 1sqx_G* 2a06_G* 2fyu_G* 2ybb_G* 1bcc_G* 2bcc_G* 3bcc_G* ...
Probab=31.77 E-value=80 Score=19.65 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=29.2
Q ss_pred hchhhhhcchhHHHHhhhhhHHHHHHHHHHHHHHHhh
Q 025978 204 EGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 240 (245)
Q Consensus 204 ~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (245)
.|+-..+|-+.-+++..+|..++.+.+|+..++....
T Consensus 32 ~~i~n~~RR~~~~~l~v~pPfv~~Y~i~~Wa~~~~e~ 68 (81)
T 1pp9_G 32 KGIPNVLRRTRACILRVAPPFVAFYLVYTWGTQEFEK 68 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhcceeeehhHHHHHHHHHHHHHHHHH
Confidence 3556667777788888899999999999998876643
No 8
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=21.91 E-value=1.5e+02 Score=18.37 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=28.6
Q ss_pred hhhhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Q 025978 112 EGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPG 151 (245)
Q Consensus 112 ~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (245)
+|+...+|-+...++..+|..++...+|++.++.......
T Consensus 32 ~~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~l~r 71 (81)
T 3tgu_G 32 DALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR 71 (81)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 4455555556777777888888889999998887654433
No 9
>3cx5_H Cytochrome B-C1 complex subunit 8; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.23.13.1 PDB: 1kb9_H* 1kyo_H* 1p84_H* 1ezv_G* 3cxh_H* 2ibz_G*
Probab=14.69 E-value=1.5e+02 Score=18.98 Aligned_cols=36 Identities=8% Similarity=0.039 Sum_probs=28.6
Q ss_pred hchhhhhcchhHHHHhhhhhHHHHHHHHHHHHHHHh
Q 025978 204 EGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 239 (245)
Q Consensus 204 ~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~ 239 (245)
+|+-+.+|-+.-+++..+|..++...+|+..++...
T Consensus 42 ~~i~N~~RR~~~q~l~v~pPfv~~Y~i~~Wa~~~~e 77 (93)
T 3cx5_H 42 NAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNE 77 (93)
T ss_dssp TTSSSCSHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHhcceEEechHhHHHHHHHHHHHHHH
Confidence 356667777777888889999999999998887654
No 10
>2l5r_A Antimicrobial peptide alyteserin-1C; alpha helix, antimicrobial protein; NMR {Alytes obstetricans}
Probab=14.50 E-value=92 Score=14.08 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=11.3
Q ss_pred HHHHHhhchhhhhcchhHHH
Q 025978 198 IKTLKYEGFLAFYKGFLPNF 217 (245)
Q Consensus 198 ~~i~~~~G~~~ly~G~~~~~ 217 (245)
++|.+. |+..|.+|+.+..
T Consensus 3 keifka-glgslvkgiaahv 21 (26)
T 2l5r_A 3 KEIFKA-GLGSLVKGIAAHV 21 (26)
T ss_dssp HHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHH-hHHHHHHHHHHHH
Confidence 344443 6777777776554
Done!