BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025984
(245 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438783|ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Vitis vinifera]
Length = 246
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/244 (74%), Positives = 204/244 (83%), Gaps = 3/244 (1%)
Query: 1 MDSIVLPHSISVARLR-APPAGRTSGRTSFALQLPCLLLSRPGCR--VFSVLATSSDRVS 57
MD+I+LP +++V +R A + SG SF Q+PC LL +PG + V S + + S+R+S
Sbjct: 1 MDAILLPETLAVVGIRPAFASAFGSGSASFPHQMPCTLLFQPGRKPPVGSTVGSRSERIS 60
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
+RRS A+ A+GTL ANS +GVYTVGDFMT KE+LHVVK TTTV+EALEILVE RIT
Sbjct: 61 GIRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRIT 120
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
GFPVIDDDWKLVGLVSDYDLLALDSISG G D MFPEVDSTWKTFNE+QKLLSKTNGK
Sbjct: 121 GFPVIDDDWKLVGLVSDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGK 180
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK
Sbjct: 181 VVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIK 240
Query: 238 HATE 241
A E
Sbjct: 241 RAVE 244
>gi|317106695|dbj|BAJ53196.1| JHL03K20.5 [Jatropha curcas]
Length = 236
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/244 (76%), Positives = 201/244 (82%), Gaps = 14/244 (5%)
Query: 1 MDSIV---LPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVS 57
MDSI+ L H + + RLRA TS SFA QLPCLL SRPG R+ + A +S
Sbjct: 1 MDSILHQELLH-LPITRLRATA---TSPIVSFAQQLPCLLSSRPGRRLLPLSA-----IS 51
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
RRSSA+ ASG A+S P SGVYTVGDFMT KE+L VVKPTTTVDEAL+ LVE RIT
Sbjct: 52 HPRRSSAIAASGAFVASS--PKSGVYTVGDFMTRKEDLQVVKPTTTVDEALQTLVEHRIT 109
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
GFPVIDDDWKLVGLVSDYDLLALDSISG GR DNSMFPEVDSTWKTFNEVQKLLSKTNGK
Sbjct: 110 GFPVIDDDWKLVGLVSDYDLLALDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGK 169
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD++GKLVGIITRGNVVRAAL+IK
Sbjct: 170 LVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSEGKLVGIITRGNVVRAALEIK 229
Query: 238 HATE 241
+ E
Sbjct: 230 RSIE 233
>gi|255587643|ref|XP_002534340.1| conserved hypothetical protein [Ricinus communis]
gi|223525462|gb|EEF28042.1| conserved hypothetical protein [Ricinus communis]
Length = 239
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/214 (80%), Positives = 182/214 (85%), Gaps = 6/214 (2%)
Query: 28 SFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGD 87
SFA QLPCLL S R L+ +S RRSS + A+GTL ANS P SGVYTVGD
Sbjct: 29 SFAHQLPCLLSSATVSRRLFHLSV----ISWPRRSSTISATGTLMANS--PKSGVYTVGD 82
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 147
FMT KE+L VVKPTTTVDEAL+ LVE RITGFPVIDDDWKLVGLVSDYDLLALDSISG G
Sbjct: 83 FMTRKEDLCVVKPTTTVDEALQTLVEHRITGFPVIDDDWKLVGLVSDYDLLALDSISGGG 142
Query: 148 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 207
R DNSMFPEVDSTWKTFNEVQKLLSKTNGK+VGDLMTPAPVVVRETTNLEDAARLLLETK
Sbjct: 143 RTDNSMFPEVDSTWKTFNEVQKLLSKTNGKLVGDLMTPAPVVVRETTNLEDAARLLLETK 202
Query: 208 YRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
YRRLPVVDA+GKLVGIITRGNVVRAAL+IK E
Sbjct: 203 YRRLPVVDAEGKLVGIITRGNVVRAALEIKRDME 236
>gi|147802944|emb|CAN64036.1| hypothetical protein VITISV_021555 [Vitis vinifera]
Length = 288
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/286 (63%), Positives = 203/286 (70%), Gaps = 45/286 (15%)
Query: 1 MDSIVLPHSISVARLR-APPAGRTSGRTSFALQLPCLLLSRPGCR--VFSVLATSSDRVS 57
MD+I+ P +++V +R A + SG SF Q+PC LL +PG + V S + + S+R+S
Sbjct: 1 MDAILPPETLAVVGIRPAFASAFGSGSASFPHQMPCTLLFQPGRKPPVGSTVGSRSERIS 60
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
LRRS A+ A+GTL ANS +GVYTVGDFMT KE+LHVVK TTTV+EALEILVE RIT
Sbjct: 61 GLRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRIT 120
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSIS--------------------------------- 144
GFPVIDDDWKLVGLVSDYDLLALDSIS
Sbjct: 121 GFPVIDDDWKLVGLVSDYDLLALDSISELPQLKHVPEDISGKSLVLHGSLERQMKSLFLT 180
Query: 145 ---------GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
G G D MFPEVDSTWKTFNE+QKLLSKTNGK+VGDLMTPAPVVVRETTN
Sbjct: 181 AVDVLIFGSGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTN 240
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
LEDAARLLLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK A E
Sbjct: 241 LEDAARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 286
>gi|224081731|ref|XP_002306482.1| predicted protein [Populus trichocarpa]
gi|222855931|gb|EEE93478.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/215 (77%), Positives = 183/215 (85%), Gaps = 10/215 (4%)
Query: 33 LPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFA---SGTLTANSAAPSSGVYTVGDFM 89
+PCLL S PG ++ S+ + +S RRS ++ A SGTL ANS P SGVYTVGDFM
Sbjct: 1 MPCLLFSTPGRKLVSLSS-----ISWPRRSPSLIAAASSGTLMANS--PKSGVYTVGDFM 53
Query: 90 TTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA 149
T KE+LHVVKPTTTV+EALE LVE+RITGFPVIDDDWKLVGLVSDYDLLALDSISG GR
Sbjct: 54 TRKEDLHVVKPTTTVNEALETLVERRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGRT 113
Query: 150 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
+ +MFPEVDSTWKTFNEVQ LL+KTNGK+VGDLMTPAPVVVRETTNLED+ RLLLETKYR
Sbjct: 114 ETNMFPEVDSTWKTFNEVQMLLNKTNGKVVGDLMTPAPVVVRETTNLEDSVRLLLETKYR 173
Query: 210 RLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
RLPVVDADGKLVGIITRGNVVRAAL IKHA E A
Sbjct: 174 RLPVVDADGKLVGIITRGNVVRAALHIKHAMERKA 208
>gi|449443418|ref|XP_004139474.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 318 bits (816), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 167/237 (70%), Positives = 188/237 (79%), Gaps = 18/237 (7%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
S+S+A RA SF++Q PC RP + A+ + LR+S++
Sbjct: 10 SLSLAPFRA---------KSFSVQEMLFGPC---RRPSLPILH--ASVAQSFPELRKSTS 55
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
+ ASGTL ANS +GVY VGDFMT KEELHVVKPTT+VDEALEILVEKRITGFPVIDD
Sbjct: 56 IAASGTLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDD 115
Query: 125 DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMT 184
+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+VGDLMT
Sbjct: 116 NWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMT 175
Query: 185 PAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
AP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA E
Sbjct: 176 TAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEE 232
>gi|449525190|ref|XP_004169601.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/237 (70%), Positives = 188/237 (79%), Gaps = 18/237 (7%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
S+S+A RA SF++Q PC RP + A+ + LR+S++
Sbjct: 10 SLSLAPFRA---------KSFSVQEMLFGPC---RRPSLPILH--ASVAQSFPELRKSTS 55
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
+ ASGTL ANS +GVY VGDFMT KEELHVVKPTT+VDEALEILVEKRITGFPVIDD
Sbjct: 56 IAASGTLMANSLPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDD 115
Query: 125 DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMT 184
+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+VGDLMT
Sbjct: 116 NWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMT 175
Query: 185 PAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
AP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA E
Sbjct: 176 TAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEE 232
>gi|15234564|ref|NP_195409.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75219197|sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;
AltName: Full=CBS domain-containing protein 2;
Short=AtCDCP2; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 2; Short=AtLEJ2; Flags:
Precursor
gi|4006881|emb|CAB16799.1| putative protein [Arabidopsis thaliana]
gi|7270640|emb|CAB80357.1| putative protein [Arabidopsis thaliana]
gi|21537376|gb|AAM61717.1| unknown [Arabidopsis thaliana]
gi|28392900|gb|AAO41886.1| unknown protein [Arabidopsis thaliana]
gi|28827758|gb|AAO50723.1| unknown protein [Arabidopsis thaliana]
gi|332661316|gb|AEE86716.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 236
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/209 (76%), Positives = 175/209 (83%), Gaps = 4/209 (1%)
Query: 37 LLSRPGCRVFSVLATSSDRVSALRRSSAVFASG-TLTANSAAPSSGVYTVGDFMTTKEEL 95
LS C F+ S S R SA A+G TL NS++P SGVYTVG+FMT KE+L
Sbjct: 31 FLSVQPCHKFTF---SRSFPSKSRIPSASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDL 87
Query: 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155
HVVKPTTTVDEALE+LVE RITGFPVID+DWKLVGLVSDYDLLALDSISGSGR +NSMFP
Sbjct: 88 HVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFP 147
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
EVDSTWKTFN VQKLLSKTNGK+VGDLMTPAP+VV E TNLEDAA++LLETKYRRLPVVD
Sbjct: 148 EVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 207
Query: 216 ADGKLVGIITRGNVVRAALQIKHATEMGA 244
+DGKLVGIITRGNVVRAALQIK + + A
Sbjct: 208 SDGKLVGIITRGNVVRAALQIKRSGDRNA 236
>gi|297802232|ref|XP_002869000.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
gi|297314836|gb|EFH45259.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/183 (81%), Positives = 166/183 (90%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
S++ A TL NS++P SGVYTVG+FMT K++LHVVKPTTTVDEALE+LVE RITGFPV
Sbjct: 54 SASSAAGSTLMKNSSSPRSGVYTVGEFMTKKDDLHVVKPTTTVDEALELLVENRITGFPV 113
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
ID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VGD
Sbjct: 114 IDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGD 173
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
LMTPAP+VV E TNLEDAA++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK + +
Sbjct: 174 LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGD 233
Query: 242 MGA 244
A
Sbjct: 234 RNA 236
>gi|356541776|ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Glycine max]
gi|255632210|gb|ACU16463.1| unknown [Glycine max]
Length = 228
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 162/175 (92%)
Query: 67 ASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW 126
A+ TLTAN +P SG+YTVGDFMT KE+LHVVKPTT+VDEALEILVE RITGFPVIDD+W
Sbjct: 51 AANTLTANDVSPRSGLYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNW 110
Query: 127 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 186
KLVG+VSDYDLLALDSISG G DN+MFPEVDSTWKTFNEVQKLLSKTNGK++G+LMT A
Sbjct: 111 KLVGVVSDYDLLALDSISGHGLKDNNMFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTA 170
Query: 187 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
P+VVRETTNLEDAARLLLETK+RRLPVVDA+G+LVGIITRGNVVRAAL +K A +
Sbjct: 171 PMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHMKQANQ 225
>gi|356496921|ref|XP_003517313.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 228
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/208 (74%), Positives = 174/208 (83%), Gaps = 4/208 (1%)
Query: 40 RPGCRVFSVLATSSDRVSA---LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELH 96
RP C + + S R S R S + A+ TLTAN+ +P SG+YTVGDFMT KE+LH
Sbjct: 22 RPLCHPLAASSASFHRSSPPLPRFRFSPLLAANTLTANNISPRSGLYTVGDFMTKKEDLH 81
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VVKPTT+VDEALEILVE RITGFPVIDD+WKLVG+VSDYDLLALDSISG G DN MFPE
Sbjct: 82 VVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVSDYDLLALDSISGHGLKDN-MFPE 140
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
VDSTWKTFNEVQKLLSKTNGK++G+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA
Sbjct: 141 VDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDA 200
Query: 217 DGKLVGIITRGNVVRAALQIKHATEMGA 244
+G+LVGIITRGNVVRAAL +K A + A
Sbjct: 201 EGRLVGIITRGNVVRAALHMKQANQKKA 228
>gi|357482805|ref|XP_003611689.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
gi|355513024|gb|AES94647.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
Length = 224
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/184 (79%), Positives = 167/184 (90%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
R S +FA+ TLTANS P +GVYTVGDFMT K+ELH VKPTTTVDEAL+ LVE RITGFP
Sbjct: 41 RGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHRITGFP 100
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDD+WKLVG+VSDYDLLALDSISG G+ DNS+FP+VDSTWKTFNEVQ+LLSKTNGK++G
Sbjct: 101 VIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLLSKTNGKVIG 160
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA+G+LVGIITRGNVVRAALQ+K +
Sbjct: 161 ELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQMKRDS 220
Query: 241 EMGA 244
+ A
Sbjct: 221 QKKA 224
>gi|217075546|gb|ACJ86133.1| unknown [Medicago truncatula]
gi|388495112|gb|AFK35622.1| unknown [Medicago truncatula]
Length = 224
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/184 (78%), Positives = 166/184 (90%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
R S +FA+ TLTANS P +GVYTVGDFMT K+ELH VKPTTTVDEAL+ LVE RITGFP
Sbjct: 41 RGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHRITGFP 100
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDD+WKLVG+VSDYDLLALDSISG G+ DNS+FP+VDSTWKTFNEVQ+L SKTNGK++G
Sbjct: 101 VIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLQSKTNGKVIG 160
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA+G+LVGIITRGNVVRAALQ+K +
Sbjct: 161 ELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQMKRDS 220
Query: 241 EMGA 244
+ A
Sbjct: 221 QKKA 224
>gi|296082380|emb|CBI21385.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/169 (88%), Positives = 155/169 (91%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
ANS +GVYTVGDFMT KE+LHVVK TTTV+EALEILVE RITGFPVIDDDWKLVGLV
Sbjct: 2 ANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLV 61
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALDSISG G D MFPEVDSTWKTFNE+QKLLSKTNGK+VGDLMTPAPVVVRE
Sbjct: 62 SDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRE 121
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
TTNLEDAARLLLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK A E
Sbjct: 122 TTNLEDAARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 170
>gi|343172406|gb|AEL98907.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
gi|343172408|gb|AEL98908.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
Length = 227
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/236 (66%), Positives = 182/236 (77%), Gaps = 10/236 (4%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFAS 68
S+S R R P+ TS +LP + R F + +SS ++ +SA S
Sbjct: 2 SLSSTRRRFTPSASLLS-TSIIPKLPSV------SRTFRL--SSSSKLRCFSAASAAVNS 52
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
T +S+ +GVYTVGDFMTT+E L VVKPTTTVDEALEILVEKRITGFPVIDDDWKL
Sbjct: 53 -TFNGHSSPSKNGVYTVGDFMTTRENLAVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 111
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VGLVSDYDLLALD+ISG+G + SMFPEVDS+WK FNE+QKLLSKTNGK+V D+MT AP+
Sbjct: 112 VGLVSDYDLLALDTISGTGLGEASMFPEVDSSWKVFNELQKLLSKTNGKLVADVMTQAPL 171
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
VVRETTNL+DAARLLLETKYRRLPVVDADGKLVGIITRGN +RAALQIK A+E A
Sbjct: 172 VVRETTNLDDAARLLLETKYRRLPVVDADGKLVGIITRGNCIRAALQIKRASEKEA 227
>gi|442570759|pdb|4GQV|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 From
Arabidopsis Thaliana
Length = 166
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/165 (86%), Positives = 155/165 (93%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFPVID+DWKLVGLVSDYDLLA
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLA 61
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
LDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VGDLMTPAP+VV E TNLEDA
Sbjct: 62 LDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDA 121
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
A++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK + + A
Sbjct: 122 AKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRNA 166
>gi|34015153|gb|AAQ56349.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
Length = 190
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/181 (76%), Positives = 158/181 (87%), Gaps = 1/181 (0%)
Query: 62 SSAVFASGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
SS SG + + P +SG+YTVGDFMT +EELHVVK TT+VDEALE+LVE RITGFP
Sbjct: 7 SSPALVSGLMVVRAKNPQNSGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFP 66
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDD+W LVG+VSDYDLLALDSISG+G A+ +FPEVDSTWKTFNE+QKLLSKTNGK++G
Sbjct: 67 VIDDEWNLVGVVSDYDLLALDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIG 126
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MT AP+VVRETTNLEDAARLLLETKYRRLPVVD+ GKLVGIITRGNVVRAAL+IK
Sbjct: 127 DVMTSAPLVVRETTNLEDAARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAALKIKKKF 186
Query: 241 E 241
E
Sbjct: 187 E 187
>gi|449445894|ref|XP_004140707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
gi|449486597|ref|XP_004157343.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 239
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 158/189 (83%)
Query: 53 SDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILV 112
SDR A V AS + P G YTVGDFMT KE L+VVKPTTTVDEALE+LV
Sbjct: 48 SDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLV 107
Query: 113 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 172
EKRITGFPV+DDDW LVG+VSDYDLLALDSISG ++D ++FP+VDS+WKTFNE+QKLL
Sbjct: 108 EKRITGFPVVDDDWNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLC 167
Query: 173 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
KTNGK+VGDLMT +P+ VRET+NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA
Sbjct: 168 KTNGKVVGDLMTSSPLAVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 227
Query: 233 ALQIKHATE 241
ALQIK A E
Sbjct: 228 ALQIKRAAE 236
>gi|224096724|ref|XP_002310713.1| predicted protein [Populus trichocarpa]
gi|222853616|gb|EEE91163.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 139/156 (89%), Positives = 145/156 (92%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MT KE+LHVVKPTTTVDEALE LVE RITGFPVIDDDWKLVGLVSDYDLLALDSISG GR
Sbjct: 1 MTRKEDLHVVKPTTTVDEALEALVEHRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGR 60
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
+ +MFPEV+STWKTFNEVQ+LLSKTNGK+VGDLMTPAPVVVRETTNLEDAARLLLETKY
Sbjct: 61 TETNMFPEVESTWKTFNEVQRLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKY 120
Query: 209 RRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
RRLPVVDADGKLVGIITRGNVVRAAL IKH E A
Sbjct: 121 RRLPVVDADGKLVGIITRGNVVRAALHIKHDIERKA 156
>gi|224056130|ref|XP_002298732.1| predicted protein [Populus trichocarpa]
gi|222845990|gb|EEE83537.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 141/184 (76%), Positives = 156/184 (84%), Gaps = 1/184 (0%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
RSS A T+ ANS SG+YTVGDFMT KE L+VVK TTVDEALE LVEKRITGFP
Sbjct: 54 RSSVAVALSTV-ANSVPARSGIYTVGDFMTKKEGLYVVKANTTVDEALEALVEKRITGFP 112
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDDDW+LVG+VSDYDLLALDSISG + D ++FP VDS+WKTFNE+QKLL K NGK+VG
Sbjct: 113 VIDDDWRLVGVVSDYDLLALDSISGGCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKLVG 172
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
DLMTP P+VV ETTNLEDA RLLLETKYRRLPVVD DGKLVGIITRG++VRAALQIK+AT
Sbjct: 173 DLMTPNPLVVYETTNLEDAVRLLLETKYRRLPVVDDDGKLVGIITRGDIVRAALQIKNAT 232
Query: 241 EMGA 244
E A
Sbjct: 233 ERSA 236
>gi|388522595|gb|AFK49359.1| unknown [Lotus japonicus]
Length = 222
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/171 (78%), Positives = 154/171 (90%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
NS P +GVYTVGDFMT +E+LHVVKPTTTVDEALE+LVE R+TGFPVIDD W LV +VS
Sbjct: 52 NSVPPKNGVYTVGDFMTKREDLHVVKPTTTVDEALEMLVEHRVTGFPVIDDKWNLVCVVS 111
Query: 134 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
DYDLLALDSISG+GR ++SMFPEVDS+WKTFNEVQ LLSKTNGK++G+LMT AP+VVRE
Sbjct: 112 DYDLLALDSISGNGRKESSMFPEVDSSWKTFNEVQNLLSKTNGKVIGELMTTAPMVVREN 171
Query: 194 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
TNLEDAARLLLETK+RRLPVVD++G+LVGIITRGNVV AALQIK A + A
Sbjct: 172 TNLEDAARLLLETKFRRLPVVDSEGRLVGIITRGNVVGAALQIKRAIQNKA 222
>gi|115475836|ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|50508236|dbj|BAD31758.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|215768507|dbj|BAH00736.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194170|gb|EEC76597.1| hypothetical protein OsI_14449 [Oryza sativa Indica Group]
gi|222640324|gb|EEE68456.1| hypothetical protein OsJ_26849 [Oryza sativa Japonica Group]
gi|258644543|dbj|BAI39797.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
gi|258644675|dbj|BAI39922.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
Length = 235
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/169 (80%), Positives = 154/169 (91%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A+ A +SG+YTVGDFMT +EELHVVK TT+VDEALE+LVE RITGFPVIDD+W LVG+V
Sbjct: 64 ASVAGQNSGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVV 123
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALDSISG+G A+ +FPEVDSTWKTFNE+QKLLSKTNGK++GD+MT AP+VVRE
Sbjct: 124 SDYDLLALDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRE 183
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
TTNLEDAARLLLETKYRRLPVVD+ GKLVGIITRGNVVRAAL+IK E
Sbjct: 184 TTNLEDAARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAALKIKKKFE 232
>gi|225428867|ref|XP_002285148.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Vitis vinifera]
gi|297741249|emb|CBI32380.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 154/184 (83%), Gaps = 3/184 (1%)
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
ALRR A +T NS +G Y VGDFMT KE LHVVKPTT VDEALE LVEK+IT
Sbjct: 47 ALRRRPA---HAAITTNSVPHRNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKIT 103
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
GFPVID+DWKLVGLVSDYDLLALDSISG + D ++FP+VDS+WK FN++QKLL+KT GK
Sbjct: 104 GFPVIDEDWKLVGLVSDYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGK 163
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+VGD+MTPAPVVV ETTNLEDAARLLLETKYRRLPVVD DGKLVGI+TRG+VVRAAL+IK
Sbjct: 164 VVGDVMTPAPVVVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRAALKIK 223
Query: 238 HATE 241
E
Sbjct: 224 GTRE 227
>gi|18418376|ref|NP_567952.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75268156|sp|Q9C5D0.1|CBSX2_ARATH RecName: Full=CBS domain-containing protein CBSX2, chloroplastic;
AltName: Full=CBS domain-containing protein 1;
Short=AtCDCP1; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 1; Short=AtLEJ1; Flags:
Precursor
gi|13430838|gb|AAK26041.1|AF360331_1 unknown protein [Arabidopsis thaliana]
gi|15810601|gb|AAL07188.1| unknown protein [Arabidopsis thaliana]
gi|332660926|gb|AEE86326.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/193 (70%), Positives = 163/193 (84%), Gaps = 11/193 (5%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAL 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 168
E+LVEK++TG PVIDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWKTFNE+Q
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQ 162
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
KL+SKT GK+VGDLMTP+P+VVR++TNLEDAARLLLETK+RRLPVVDADGKL+GI+TRGN
Sbjct: 163 KLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGN 222
Query: 229 VVRAALQIKHATE 241
VVRAALQIK TE
Sbjct: 223 VVRAALQIKRETE 235
>gi|297802578|ref|XP_002869173.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
gi|297315009|gb|EFH45432.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 160/180 (88%), Gaps = 1/180 (0%)
Query: 63 SAVFASGTLTANSAAPS-SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
SA FA+ N++ P+ +G YTVGDFMT ++ LHVVKP+T+VD+ALE+LVEK++TG PV
Sbjct: 55 SAFFAAPASVNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPV 114
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
IDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWKTFNE+QKL+SKT GK+VGD
Sbjct: 115 IDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGD 174
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
LMTP+P+VVR++TNLEDAARLLLETK+RRLPVVDADGKL+GI+TRGNVVRAALQIK TE
Sbjct: 175 LMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETE 234
>gi|313235700|emb|CBY11152.1| unnamed protein product [Oikopleura dioica]
Length = 158
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/135 (98%), Positives = 133/135 (98%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 170
L EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL
Sbjct: 24 LYEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 83
Query: 171 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV
Sbjct: 84 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 143
Query: 231 RAALQIKHATEMGAQ 245
RAAL IKHATEMGAQ
Sbjct: 144 RAALSIKHATEMGAQ 158
>gi|255555395|ref|XP_002518734.1| conserved hypothetical protein [Ricinus communis]
gi|223542115|gb|EEF43659.1| conserved hypothetical protein [Ricinus communis]
Length = 220
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/187 (70%), Positives = 159/187 (85%), Gaps = 1/187 (0%)
Query: 55 RVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK 114
R SALR ++ TLT N+ P +G+YTVGDFMT KE+L+VVK TTVDEALE +VEK
Sbjct: 34 RRSALRSRTSAINFSTLT-NNGLPRNGMYTVGDFMTRKEDLYVVKTMTTVDEALEAMVEK 92
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174
+I+GFPV+DD+WKLVG+VSDYDLLAL+SISG ++ ++FP+ DS+WKTFNE+QKLL+K
Sbjct: 93 KISGFPVVDDNWKLVGVVSDYDLLALNSISGRNQSGTNLFPDTDSSWKTFNEMQKLLTKN 152
Query: 175 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
NGK+VGDLMTPAP+VV ETTNLEDAARLLL+TKY RLPVVD DGKLVG+I R NVVRAAL
Sbjct: 153 NGKVVGDLMTPAPLVVNETTNLEDAARLLLDTKYHRLPVVDGDGKLVGMIARENVVRAAL 212
Query: 235 QIKHATE 241
QIK A++
Sbjct: 213 QIKRASQ 219
>gi|326488002|dbj|BAJ89840.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512290|dbj|BAJ96126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/187 (72%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
Query: 57 SALRRSSAVFASGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK 114
S++R S+A A G L +++ + G YTVGDFMT +E LHVVKP+T+VDEALE LVE
Sbjct: 41 SSIRASAATAARGNLPHHTSVVVEAGGAYTVGDFMTKREHLHVVKPSTSVDEALERLVEH 100
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174
RITGFPV DD W LVG+VSDYDLLALDSISG+G+A+ +FPEVDSTWKTF E+QKLLSKT
Sbjct: 101 RITGFPVTDDHWNLVGVVSDYDLLALDSISGNGQAEPDIFPEVDSTWKTFREIQKLLSKT 160
Query: 175 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
NGK+V D+MT AP+VVRETTNLEDAARLLL TKYRRLPVVD GKLVGIITRGNVVRAAL
Sbjct: 161 NGKVVSDVMTSAPLVVRETTNLEDAARLLLVTKYRRLPVVDGSGKLVGIITRGNVVRAAL 220
Query: 235 QIKHATE 241
+ K E
Sbjct: 221 EFKKNVE 227
>gi|147839911|emb|CAN65905.1| hypothetical protein VITISV_004872 [Vitis vinifera]
Length = 298
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/168 (77%), Positives = 147/168 (87%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
N+ +G Y VGDFMT KE LHVVKPTT VDEALE LVEK+ITGFPVID+DWKLVGLVS
Sbjct: 128 NACHHRNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKITGFPVIDEDWKLVGLVS 187
Query: 134 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
DYDLLALDSISG + D ++FP+VDS+WK FN++QKLL+KT GK+VGD+MTPAPVVV ET
Sbjct: 188 DYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGKVVGDVMTPAPVVVHET 247
Query: 194 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
TNLEDAARLLLETKYRRLPVVD DGKLVGI+TRG+VVRAAL+IK E
Sbjct: 248 TNLEDAARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRAALKIKGTRE 295
>gi|195619856|gb|ACG31758.1| IMP dehydrogenase [Zea mays]
gi|195637366|gb|ACG38151.1| IMP dehydrogenase [Zea mays]
gi|413922004|gb|AFW61936.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 151/169 (89%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A+ A S+G Y VGD MT +EELHVVKPTT+VD+ALE+LV+ RI+GFPVIDDDW LVG+V
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVV 120
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALD+ISG+G A+ +FPEVDSTWKTF+E+QKLLSKTNGK++ D+MTPAP+VVRE
Sbjct: 121 SDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRE 180
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
TTNLEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVV+AAL+IK E
Sbjct: 181 TTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 229
>gi|357145579|ref|XP_003573692.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 233
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/166 (78%), Positives = 146/166 (87%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135
A +S YTVGDFMT +EELHVVKPTT+VDEALE LVE RITGFPVIDDDW LVG+VSDY
Sbjct: 65 AGETSRTYTVGDFMTKREELHVVKPTTSVDEALERLVEHRITGFPVIDDDWNLVGVVSDY 124
Query: 136 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
DLLALDSISG+G A+ +FPEVDSTWKTF E+QKLLSKTNG+++ D+MT +P+VVRETTN
Sbjct: 125 DLLALDSISGNGMAEGDIFPEVDSTWKTFREIQKLLSKTNGQVISDVMTSSPLVVRETTN 184
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
LEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVVRAAL+ K E
Sbjct: 185 LEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVRAALEFKKKVE 230
>gi|357150779|ref|XP_003575573.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 230
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/167 (76%), Positives = 149/167 (89%), Gaps = 2/167 (1%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
+GVYTVGDFMT K+ LHVVKP+T+VDEALE+LV+ RI+GFPVIDD+WKLVG+VSDYDLLA
Sbjct: 64 NGVYTVGDFMTKKDNLHVVKPSTSVDEALEMLVQHRISGFPVIDDNWKLVGVVSDYDLLA 123
Query: 140 LDSISGSGRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
LDS++G G AD SMFPEVDSTWKTF E+Q+LLSKTNGK++ D+MTP P+VVRETTNL+
Sbjct: 124 LDSMAGCGLADKNTSMFPEVDSTWKTFREIQRLLSKTNGKVISDVMTPTPLVVRETTNLD 183
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
AARLLLETKY RLPVV++ GKLVG+ITRGNVVRAAL+IK E GA
Sbjct: 184 AAARLLLETKYHRLPVVNSTGKLVGMITRGNVVRAALKIKKKAEEGA 230
>gi|226529195|ref|NP_001149160.1| LOC100282782 [Zea mays]
gi|195625176|gb|ACG34418.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 150/169 (88%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A+ A S+G Y VGD MT +EELHVVKPTT+VD+ALE+LV+ RI+GFPVIDDDW LVG+V
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVV 120
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALD+ISG+G A+ +FPEVDST KTF+E+QKLLSKTNGK++ D+MTPAP+VVRE
Sbjct: 121 SDYDLLALDTISGAGPAEADIFPEVDSTSKTFHEIQKLLSKTNGKVIADVMTPAPLVVRE 180
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
TTNLEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVV+AAL+IK E
Sbjct: 181 TTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 229
>gi|356499765|ref|XP_003518707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 225
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 156/193 (80%), Gaps = 3/193 (1%)
Query: 52 SSDRVSALRR---SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAL 108
SS V RR SS + + T NS ++G YTV DFMT K++LHVVK TTTVDEAL
Sbjct: 32 SSSAVPKRRRFSNSSGFRLASSQTVNSVPRANGTYTVSDFMTKKQDLHVVKTTTTVDEAL 91
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 168
E LV RI+G PVID+DW LVG+VSDYDLLA+DSISG ++D ++FP+VDSTWKTFNE+Q
Sbjct: 92 EALVNNRISGLPVIDEDWNLVGVVSDYDLLAIDSISGGPQSDANLFPDVDSTWKTFNELQ 151
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
KLLSKTNG++VGDLMTP P+VV E+T+LE+AARLLLETKYRRLPVVD DGKLVG+ITRGN
Sbjct: 152 KLLSKTNGQVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGLITRGN 211
Query: 229 VVRAALQIKHATE 241
+V+AAL K A E
Sbjct: 212 IVKAALLSKRAGE 224
>gi|356624493|pdb|3SL7|A Chain A, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
gi|356624494|pdb|3SL7|B Chain B, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
Length = 180
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/159 (75%), Positives = 145/159 (91%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDF T ++ LHVVKP+T+VD+ALE+LVEK++TG PVIDD+W LVG+VSDYDLLALDS
Sbjct: 4 YTVGDFXTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDS 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
ISG + D ++FP+VDSTWKTFNE+QKL+SKT GK+VGDL TP+P+VVR++TNLEDAARL
Sbjct: 64 ISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLXTPSPLVVRDSTNLEDAARL 123
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
LLETK+RRLPVVDADGKL+GI+TRGNVVRAALQIK +
Sbjct: 124 LLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRNAD 162
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--AL-- 140
VGD T VV+ +T +++A +L+E + PV+D D KL+G+++ +++ AL
Sbjct: 100 VGDLXTPSP--LVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157
Query: 141 ----DSISGSGRADNSMFPEVDS 159
DSISG + D ++FP+VDS
Sbjct: 158 KRNADSISGRSQNDTNLFPDVDS 180
>gi|388507816|gb|AFK41974.1| unknown [Medicago truncatula]
Length = 221
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 147/170 (86%), Gaps = 2/170 (1%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T NS ++G YTV DFMT K LHVVK TT+VDEALE LV+ RI+G PVID++W LVG+
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGV 110
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
VSDYDLLA+D+ISGS +D S+FP+VDSTWKTFNE+QKLLSKTNGK+VGDLMTP+P+VV
Sbjct: 111 VSDYDLLAIDTISGS--SDASLFPDVDSTWKTFNEIQKLLSKTNGKVVGDLMTPSPLVVH 168
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
E+T+LEDAARLLLETKYRRLPVVD DGKLVG+ITRGN+V+AAL K + E
Sbjct: 169 ESTSLEDAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALLSKRSGE 218
>gi|442570760|pdb|4GQW|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 (loop
Deletion) From Arabidopsis Thaliana
Length = 152
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/165 (78%), Positives = 141/165 (85%), Gaps = 14/165 (8%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFPVID+DWKLVGLVSDYDLLA
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLA 61
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
LDS DSTWKTFN VQKLLSKTNGK+VGDLMTPAP+VV E TNLEDA
Sbjct: 62 LDS--------------GDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDA 107
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
A++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK + + A
Sbjct: 108 AKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRNA 152
>gi|294462367|gb|ADE76732.1| unknown [Picea sitchensis]
Length = 252
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 143/170 (84%)
Query: 70 TLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129
TL A P V+TVGDFMT KE L VVKPTT VDEA+E LV RITG PV+D+DWKLV
Sbjct: 82 TLMATDVPPKHEVFTVGDFMTRKENLIVVKPTTMVDEAMESLVANRITGLPVVDNDWKLV 141
Query: 130 GLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV 189
G+VSDYDLLALDSISG+GR + FP+V STWK FNE+Q LL+KTNGK+V ++MTP+P+V
Sbjct: 142 GVVSDYDLLALDSISGAGRTETGFFPQVGSTWKAFNELQNLLNKTNGKIVAEVMTPSPLV 201
Query: 190 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
+RETTNLEDAARLLLETKYRRLPVVD GKLVGI+TRGNV++AAL++K A
Sbjct: 202 IRETTNLEDAARLLLETKYRRLPVVDNSGKLVGILTRGNVIKAALKMKRA 251
>gi|224103629|ref|XP_002313129.1| predicted protein [Populus trichocarpa]
gi|222849537|gb|EEE87084.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TVGDFMT +E+LHV K TTVDEALE LVEKRITGFPVIDD+WKLVG+VSDYDLL L
Sbjct: 1 IHTVGDFMTKREDLHVFKANTTVDEALEALVEKRITGFPVIDDNWKLVGVVSDYDLLVLG 60
Query: 142 SISGSG-RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
SISGS + D ++FP VDS+WKTFNE+QKLL K NGK+VGDLMTP P+VV ETTNLEDA
Sbjct: 61 SISGSSCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKVVGDLMTPNPLVVYETTNLEDAV 120
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
RLLLETKYRRLPVVD DGKLVGIITRG++VRA+ QIK +TE
Sbjct: 121 RLLLETKYRRLPVVDNDGKLVGIITRGDIVRASQQIKSSTE 161
>gi|413922005|gb|AFW61937.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 260
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/197 (65%), Positives = 151/197 (76%), Gaps = 28/197 (14%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDE-------------------------- 106
A+ A S+G Y VGD MT +EELHVVKPTT+VD+
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLF 120
Query: 107 --ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
ALE+LV+ RI+GFPVIDDDW LVG+VSDYDLLALD+ISG+G A+ +FPEVDSTWKTF
Sbjct: 121 FAALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTF 180
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
+E+QKLLSKTNGK++ D+MTPAP+VVRETTNLEDAARLLL TKYRRLPVVD+ GKLVGII
Sbjct: 181 HEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGII 240
Query: 225 TRGNVVRAALQIKHATE 241
TRGNVV+AAL+IK E
Sbjct: 241 TRGNVVQAALEIKKKVE 257
>gi|238008544|gb|ACR35307.1| unknown [Zea mays]
gi|413922006|gb|AFW61938.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 156
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/153 (79%), Positives = 141/153 (92%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MT +EELHVVKPTT+VD+ALE+LV+ RI+GFPVIDDDW LVG+VSDYDLLALD+ISG+G
Sbjct: 1 MTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGP 60
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
A+ +FPEVDSTWKTF+E+QKLLSKTNGK++ D+MTPAP+VVRETTNLEDAARLLL TKY
Sbjct: 61 AEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKY 120
Query: 209 RRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
RRLPVVD+ GKLVGIITRGNVV+AAL+IK E
Sbjct: 121 RRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 153
>gi|363808222|ref|NP_001242233.1| uncharacterized protein LOC100781400 [Glycine max]
gi|255647096|gb|ACU24016.1| unknown [Glycine max]
Length = 222
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 146/178 (82%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
SS + + T NS +G YTV DF T K++LHVVK TTTVDEALE LV RI+G PV
Sbjct: 44 SSGFRLASSQTVNSVPRGNGTYTVADFATKKQDLHVVKTTTTVDEALEALVNYRISGLPV 103
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
ID+ W LVG+VSDYDLLA+DSISG ++D ++FP VDSTWKTFNE+QKLLSKTNG++VGD
Sbjct: 104 IDEVWNLVGVVSDYDLLAIDSISGGPQSDANLFPNVDSTWKTFNELQKLLSKTNGQVVGD 163
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
LMTP P+VV E+T+LE+AARLLLETKYRRLPVVD DGKLVG+ITRGN+V+AAL K A
Sbjct: 164 LMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGLITRGNIVKAALLSKRA 221
>gi|226506150|ref|NP_001147441.1| cystathionin beta synthase protein [Zea mays]
gi|195611422|gb|ACG27541.1| cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/164 (72%), Positives = 144/164 (87%), Gaps = 2/164 (1%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMTT++ LHVV+PTT VD+ALE+LV+ RI+GFPV+DDDW LVG+VSDYDLLALDS
Sbjct: 64 YTVGDFMTTRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDS 123
Query: 143 ISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+ VR TNL+ A
Sbjct: 124 MSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLDAAT 183
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
RLLLETKYRRLPVVD+ GKLVG+ITRGNVV AAL+IK TE GA
Sbjct: 184 RLLLETKYRRLPVVDSMGKLVGMITRGNVVSAALKIKKKTEEGA 227
>gi|414587994|tpg|DAA38565.1| TPA: cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/164 (71%), Positives = 143/164 (87%), Gaps = 2/164 (1%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMT ++ LHVV+PTT VD+ALE+LV+ RI+GFPV+DDDW LVG+VSDYDLLALDS
Sbjct: 64 YTVGDFMTRRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDS 123
Query: 143 ISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+ VR TNL+ A
Sbjct: 124 MSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLDAAT 183
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
RLLLETKYRRLPVVD+ GKLVG+ITRGNVV AAL+IK TE GA
Sbjct: 184 RLLLETKYRRLPVVDSMGKLVGMITRGNVVSAALKIKKKTEEGA 227
>gi|115477978|ref|NP_001062584.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|46389988|dbj|BAD16230.1| CBS domain containing protein-like [Oryza sativa Japonica Group]
gi|113630817|dbj|BAF24498.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|215686955|dbj|BAG89764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692644|dbj|BAG88064.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201664|gb|EEC84091.1| hypothetical protein OsI_30399 [Oryza sativa Indica Group]
gi|222641067|gb|EEE69199.1| hypothetical protein OsJ_28393 [Oryza sativa Japonica Group]
Length = 227
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/165 (71%), Positives = 140/165 (84%), Gaps = 2/165 (1%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
++GVYTVGDFMT + LHVV P T+VDEALE LV+ +I+GFPV+DD KLVG+VSDYDLL
Sbjct: 60 NNGVYTVGDFMTKRPNLHVVTPATSVDEALETLVQHKISGFPVVDDTGKLVGVVSDYDLL 119
Query: 139 ALDSISGSGRA--DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 196
ALDSISGSG + SMFPEVDSTWKTF E+Q+LLSKTNGK++ D+MT +P+ VRE+TNL
Sbjct: 120 ALDSISGSGLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYSPLAVRESTNL 179
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+ A RLLLETKYRRLPVVD+ GKLVG+ITRG VVRAAL+IK E
Sbjct: 180 DAATRLLLETKYRRLPVVDSTGKLVGMITRGTVVRAALKIKKTAE 224
>gi|413922007|gb|AFW61939.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 184
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 141/181 (77%), Gaps = 28/181 (15%)
Query: 89 MTTKEELHVVKPTTTVDE----------------------------ALEILVEKRITGFP 120
MT +EELHVVKPTT+VD+ ALE+LV+ RI+GFP
Sbjct: 1 MTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLFFAALEMLVKHRISGFP 60
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDDDW LVG+VSDYDLLALD+ISG+G A+ +FPEVDSTWKTF+E+QKLLSKTNGK++
Sbjct: 61 VIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIA 120
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MTPAP+VVRETTNLEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVV+AAL+IK
Sbjct: 121 DVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKV 180
Query: 241 E 241
E
Sbjct: 181 E 181
>gi|168027670|ref|XP_001766352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682261|gb|EDQ68680.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 136/182 (74%)
Query: 60 RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGF 119
R SS T+T N YTVGD+MT EL+ TT+DEALE+LVEKRITG
Sbjct: 62 RGSSFPLPRSTMTENPTPQKQETYTVGDYMTPVSELYCATVNTTIDEALEVLVEKRITGM 121
Query: 120 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179
PVIDD LVG+VSDYDLLALDSISG + + S+FPE TWK F E+QKLL KTNGK V
Sbjct: 122 PVIDDFGALVGVVSDYDLLALDSISGQRQPETSLFPEAGRTWKAFKEIQKLLIKTNGKTV 181
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
GD+MTP+P+VV E TNLEDAAR+LL+TK+RRLPVV DGKLVG++TRGNVVRAAL +K A
Sbjct: 182 GDVMTPSPLVVSEQTNLEDAARVLLDTKFRRLPVVGDDGKLVGLLTRGNVVRAALVMKRA 241
Query: 240 TE 241
E
Sbjct: 242 AE 243
>gi|449438390|ref|XP_004136971.1| PREDICTED: CBS domain-containing protein CBSX2, chloroplastic-like
[Cucumis sativus]
Length = 215
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 149/197 (75%), Gaps = 2/197 (1%)
Query: 47 SVLATSSDRVSALRRSSAVFA-SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVD 105
S L T+ R + R A SG ++S +G Y VGDFMT K L V+KP+T+V+
Sbjct: 16 SRLPTTQLRHAGYRSPVVALAFSGHRVSSSIPFRNGSYAVGDFMTKKGNLQVLKPSTSVE 75
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN-SMFPEVDSTWKTF 164
EALE+LVEK ++GFPV+DDDWKLVG+VSDYDLLALDSISG G D ++FP+V+ +W++F
Sbjct: 76 EALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGDIINIFPDVNCSWESF 135
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
+QKLLSK NG++VGDLMTPAP+VV ET N E+AARLLLETK+ RLPVVD +GKLVGII
Sbjct: 136 KLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAARLLLETKFHRLPVVDCEGKLVGII 195
Query: 225 TRGNVVRAALQIKHATE 241
TR ++VR L++K E
Sbjct: 196 TREDIVRVGLEMKRTQE 212
>gi|171452350|dbj|BAG15866.1| hypothetical protein [Bruguiera gymnorhiza]
Length = 237
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 142/181 (78%), Gaps = 2/181 (1%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
RSS F+ T AP Y VG+FM KE+L V+K TTTVDEAL LVE +TGFP
Sbjct: 56 RSS--FSPAFSTNPVPAPREQTYKVGNFMIKKEDLLVLKTTTTVDEALVALVEDSVTGFP 113
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDDDWKLVG+VSDYD+LA+DSISG + D ++FP+VD +WKTFNE++K+L KT+GK+VG
Sbjct: 114 VIDDDWKLVGVVSDYDILAIDSISGCSQIDRNVFPDVDLSWKTFNELRKILMKTHGKVVG 173
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
DLMTP P+VV ETT++E ARLLL+TKY RLPVVD+D KLVG+I R +VV+AAL IK A+
Sbjct: 174 DLMTPNPLVVHETTDIETVARLLLDTKYHRLPVVDSDDKLVGVIAREDVVKAALLIKRAS 233
Query: 241 E 241
E
Sbjct: 234 E 234
>gi|302762132|ref|XP_002964488.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
gi|302820740|ref|XP_002992036.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300140158|gb|EFJ06885.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300168217|gb|EFJ34821.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
Length = 165
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 133/159 (83%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV DFMT +++L V+ +TTVD+AL++LV+ RITG PVID+D KLVG+VSDYDLLALDS
Sbjct: 1 YTVCDFMTPRKDLFCVRVSTTVDDALKLLVDNRITGLPVIDEDGKLVGVVSDYDLLALDS 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
ISG + NS+FPE STWK F E+Q LL+KT GK VGDLMTP+P+VVR N+EDAAR+
Sbjct: 61 ISGKRPSTNSLFPEAGSTWKAFKEIQHLLTKTQGKTVGDLMTPSPLVVRVDMNIEDAARI 120
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
LL+TKYRRLPVVD GKLVG+ITRGNVVRAALQ+K A E
Sbjct: 121 LLDTKYRRLPVVDECGKLVGLITRGNVVRAALQVKRAAE 159
>gi|168039489|ref|XP_001772230.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676561|gb|EDQ63043.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/159 (70%), Positives = 131/159 (82%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGD+MT +L+ TT+DEALE+LVEKRITG PVIDD LVG+VSDYDLLALDS
Sbjct: 1 YTVGDYMTPVSDLYCATVNTTIDEALEVLVEKRITGMPVIDDAGALVGVVSDYDLLALDS 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
ISG + + S+FPE TWK F E+QKLL KTNGKMVGD+MTP+P+VVRE TNLEDAAR+
Sbjct: 61 ISGQRQPETSLFPEAGRTWKAFREIQKLLVKTNGKMVGDVMTPSPLVVREHTNLEDAARV 120
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
LL+TK+RRLPVV DGKLVG++TRGNVVRAAL +K A E
Sbjct: 121 LLDTKFRRLPVVGDDGKLVGLLTRGNVVRAALIMKRAAE 159
>gi|168024159|ref|XP_001764604.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684182|gb|EDQ70586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/160 (67%), Positives = 130/160 (81%), Gaps = 1/160 (0%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMT EL+ TT+DEALE+LV++RITG PV+DD LVG+VSDYDLLALDS
Sbjct: 1 YTVGDFMTPMTELYCATENTTIDEALEVLVDRRITGMPVVDDTGALVGVVSDYDLLALDS 60
Query: 143 ISGSGRA-DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
ISG R + S+FPE TWK F E+QKLL KTNGK +GD+MTP+P+VVR+ TNLEDAA+
Sbjct: 61 ISGWQRQPETSLFPEAGRTWKAFKEIQKLLVKTNGKTIGDVMTPSPLVVRKQTNLEDAAK 120
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+LL+TK+RRLPVVD DGKLVG++TRGNVVRAAL +K E
Sbjct: 121 VLLDTKFRRLPVVDQDGKLVGLLTRGNVVRAALYMKRTAE 160
>gi|2911050|emb|CAA17560.1| putative protein [Arabidopsis thaliana]
gi|7270361|emb|CAB80129.1| putative protein [Arabidopsis thaliana]
Length = 249
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 137/199 (68%), Gaps = 35/199 (17%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAL 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD---------- 158
E+LVEK++TG PVIDD+W LVG+VSDYDLLALDSIS S+ V
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISVKMIQTCSLMSTVPGKTIVCFICM 162
Query: 159 --------------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S +TFNE+QKL+SKT GK+VGDLMTP+P+VVR++TNLEDAARLLL
Sbjct: 163 NFLGMRFTYIMLEFSFGQTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLL 222
Query: 205 ETKYRRLPVVDADGKLVGI 223
ETK+RRLPVVDADGKLV I
Sbjct: 223 ETKFRRLPVVDADGKLVSI 241
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPV--VVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
N + +K G VGD MTP VV+ +T+++DA LL+E K LPV+D + LVG
Sbjct: 65 NNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVG 124
Query: 223 IIT 225
+++
Sbjct: 125 VVS 127
>gi|293334723|ref|NP_001168672.1| uncharacterized protein LOC100382460 [Zea mays]
gi|223950107|gb|ACN29137.1| unknown [Zea mays]
gi|414587995|tpg|DAA38566.1| TPA: hypothetical protein ZEAMMB73_092445 [Zea mays]
Length = 196
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 117/164 (71%), Gaps = 33/164 (20%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMT ++ LHVV+PTT VD+ALE+LV+ RI+GFPV+DDDW LVG+VSDYDLLALDS
Sbjct: 64 YTVGDFMTRRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDS 123
Query: 143 ISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+
Sbjct: 124 MSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLA----------- 172
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
VG+ITRGNVV AAL+IK TE GA
Sbjct: 173 --------------------VGMITRGNVVSAALKIKKKTEEGA 196
>gi|302762130|ref|XP_002964487.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
gi|300168216|gb|EFJ34820.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
Length = 168
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 115/163 (70%), Gaps = 9/163 (5%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YT+ +F+ K++ V+ +TTVD+AL++L++ RITG PVID D KLVG+VSDYDLLALDS
Sbjct: 5 YTICNFIMPKKDPFCVQVSTTVDDALKLLMDNRITGLPVIDKDRKLVGVVSDYDLLALDS 64
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
ISG + NS+FPE STWK F E+Q L +KT GK VGDLMTP P+VVR +
Sbjct: 65 ISGKRPSTNSLFPEAGSTWKAFKEIQHLPTKTQGKTVGDLMTPLPLVVRAS-----CCGR 119
Query: 203 LLETKYRRLPVVDADGKL----VGIITRGNVVRAALQIKHATE 241
+L+T L ++D + L VG+ITRGNVVRAALQ+K A E
Sbjct: 120 VLKTGNEELDLLDCENSLVNFQVGLITRGNVVRAALQVKRAAE 162
>gi|384246295|gb|EIE19786.1| cystathionine beta-synthase [Coccomyxa subellipsoidea C-169]
Length = 155
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
TK ++ + T+VDEALE++V+ R++G PV+D+ ++VG+VSDYDLL+LD++SG + +
Sbjct: 2 TKGKIFSARVNTSVDEALELMVKHRVSGLPVLDESNRVVGVVSDYDLLSLDAVSGKMQ-E 60
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
FP D+ W +F+EVQKL+ K G++VGD+MT PVVVR T++ AAR+LL+T+ RR
Sbjct: 61 AGFFPRADTNWDSFHEVQKLVLKNAGRVVGDVMTENPVVVRANTDMTSAARMLLDTRVRR 120
Query: 211 LPVVDADGKLVGIITRGNVVRAALQIKHA 239
LPVVD DG+LVGI TRG+V++AAL ++ A
Sbjct: 121 LPVVDDDGRLVGIFTRGDVIKAALDVRRA 149
>gi|302820742|ref|XP_002992037.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
gi|300140159|gb|EFJ06886.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
Length = 154
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 103/146 (70%), Gaps = 11/146 (7%)
Query: 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 166
AL++LV+ RITG PV D D KLVG+VSDY+LLALDSI G + NS+FPE STWK F E
Sbjct: 3 ALKLLVDNRITGLPVTDKDRKLVGVVSDYNLLALDSILGKRPSSNSLFPEAGSTWKAFKE 62
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVR-----------ETTNLEDAARLLLETKYRRLPVVD 215
+Q LL+K GK VGDLMTP P+V++ + R+LL+TKY+RLPVVD
Sbjct: 63 IQHLLTKIQGKTVGDLMTPLPLVLQTFLPYSIEISLKLLGFPLDPRILLDTKYQRLPVVD 122
Query: 216 ADGKLVGIITRGNVVRAALQIKHATE 241
G LVG+ITRGNVVRAALQ+K A E
Sbjct: 123 ESGNLVGLITRGNVVRAALQVKCAAE 148
>gi|159479170|ref|XP_001697671.1| hypothetical protein CHLREDRAFT_185012 [Chlamydomonas reinhardtii]
gi|158274281|gb|EDP00065.1| predicted protein [Chlamydomonas reinhardtii]
Length = 197
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 106/147 (72%), Gaps = 2/147 (1%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M++ L+ V P TVD ALEILV RITG PV+D + ++VG+VSD+DLLALD++
Sbjct: 38 TVKDVMSSGT-LYSVSPEDTVDAALEILVNNRITGLPVLDTEGRVVGVVSDFDLLALDAV 96
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G DN +FP + +W+ F EV+K+L+KT GK + D+MTP P+ VR TNL DA +L
Sbjct: 97 -GRVNDDNMLFPSAEQSWQAFKEVKKMLAKTAGKKIKDVMTPKPITVRPETNLNDATSIL 155
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVV 230
+ K RRLPVVD GKLVG+I+RGN+V
Sbjct: 156 ISKKIRRLPVVDEHGKLVGLISRGNIV 182
>gi|302854300|ref|XP_002958659.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
gi|300255984|gb|EFJ40262.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
Length = 155
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 104/141 (73%), Gaps = 1/141 (0%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
T +L P TVD ALE+LV+ RITG PV+D + ++VG+VSD+DLLALD++ G D
Sbjct: 2 TSGKLFSCYPEDTVDSALELLVQNRITGLPVVDAENRVVGVVSDFDLLALDAV-GRVNED 60
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
++FP D +W+ F EV+K+L+K+ GK + D+MT P+ VR TNLEDA +L+ K RR
Sbjct: 61 QNLFPSADQSWQAFKEVKKMLAKSAGKKIKDVMTVQPITVRPETNLEDATNILIVKKIRR 120
Query: 211 LPVVDADGKLVGIITRGNVVR 231
LPVVD+DGKLVG+I+RGN+V+
Sbjct: 121 LPVVDSDGKLVGLISRGNIVK 141
>gi|357475265|ref|XP_003607918.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508973|gb|AES90115.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 144
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T NS ++G YTV DFMT K LHVVK TT+VDEALE LV+ RI+G PVID++W LVG+
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGV 110
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVD 158
VSDYDLLA+D+ISGS +D S+ P VD
Sbjct: 111 VSDYDLLAIDTISGS--SDASLIPIVD 135
>gi|434395335|ref|YP_007130282.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
gi|428267176|gb|AFZ33122.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
Length = 153
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV+P T ++EA++IL EKRI+G PVIDDD KLVG++S+ DL+ ++ G +
Sbjct: 15 VVRPETPLNEAIQILAEKRISGLPVIDDDGKLVGIISETDLMWQET----GVTPPAYIMI 70
Query: 157 VDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+DS N + ++ L K G+ VG++M+ PV V +L +AA+L+ + + RRLPV+
Sbjct: 71 LDSVIYLQNPAKYERDLHKALGQTVGEVMSSDPVTVSPDKSLREAAKLMHDREVRRLPVI 130
Query: 215 DADGKLVGIITRGNVVRA 232
DA+GK++GI+TRG+VVRA
Sbjct: 131 DAEGKIIGILTRGDVVRA 148
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V ++M+ P+VVR T L +A ++L E + LPV+D DGKLVGII+ +++
Sbjct: 3 KTVAEVMSRDPIVVRPETPLNEAIQILAEKRISGLPVIDDDGKLVGIISETDLM 56
>gi|443326695|ref|ZP_21055340.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
gi|442793685|gb|ELS03127.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
Length = 152
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MTT VVKP T + EA+ IL E + +G PV+DD KLVG++S+ DL+ +S
Sbjct: 4 TVADIMTTNP--IVVKPNTPLQEAISILAENKFSGLPVVDDAGKLVGVISESDLMWQES- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + K + + K G+ VG++M+ P+ V ++ DAAR++
Sbjct: 61 -GIESPPYIMFLDSIIYLKNPARYNQEIHKALGQTVGEVMSDRPITVEAEQSVPDAARIM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVR 231
+ K RRLPVVD + K++GI+T+G+V++
Sbjct: 120 HDKKVRRLPVVDEEAKIIGIVTQGDVIK 147
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT P+VV+ T L++A +L E K+ LPVVD GKLVG+I+ +++
Sbjct: 3 KTVADIMTTNPIVVKPNTPLQEAISILAENKFSGLPVVDDAGKLVGVISESDLM 56
>gi|298490018|ref|YP_003720195.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
gi|298231936|gb|ADI63072.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
Length = 152
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 95/149 (63%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M++ L V+P T + EA++IL EKRI+G PVIDD K+VG++S+ DL+ ++
Sbjct: 4 TVADVMSSNPIL--VRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + + ++ L K G+ VG++M+ +P+ + L++AA+++
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPGAYERDLHKALGQTVGEVMSKSPITITPDKPLKEAAKII 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E K RLPV+D+ G+++GI+TRG+++RA
Sbjct: 120 QEYKVHRLPVLDSTGQVIGILTRGDIIRA 148
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ P++VR T L++A ++L E + LPV+D GK+VGII+ +++
Sbjct: 3 KTVADVMSSNPILVRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLM 56
>gi|443323171|ref|ZP_21052180.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
gi|442787081|gb|ELR96805.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
Length = 144
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T + EA++IL EKRI+G PV+DD+ LVG++SD DL+ ++ G MF +
Sbjct: 8 VQPETPLSEAIKILAEKRISGLPVVDDEGALVGVISDTDLMWQET--GVEPPPYIMF--L 63
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ VG++MT P+ + ++ +AAR++ + RRLPV+D
Sbjct: 64 DSVIYLENPKRYEKEIHKALGQTVGEVMTSKPITITPEQSMREAARVMHDKNIRRLPVID 123
Query: 216 ADGKLVGIITRGNVVR 231
+ K+VGIITRG+++R
Sbjct: 124 TEAKVVGIITRGDIIR 139
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
MTP P+ V+ T L +A ++L E + LPVVD +G LVG+I+
Sbjct: 1 MTPNPLTVQPETPLSEAIKILAEKRISGLPVVDDEGALVGVIS 43
>gi|428304476|ref|YP_007141301.1| hypothetical protein Cri9333_0874 [Crinalium epipsammum PCC 9333]
gi|428246011|gb|AFZ11791.1| CBS domain containing membrane protein [Crinalium epipsammum PCC
9333]
Length = 152
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 94/148 (63%), Gaps = 4/148 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ ++ V+P T +++A++IL E+RITG PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMS--RDVITVQPQTPLNQAIQILAERRITGLPVVDDADKLVGVISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + + ++ L K G+ VG++MT +V++ L++AA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPTTYERDLHKALGQTVGEVMTTEAIVIKPEKPLQEAAKLM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVR 231
E RRLPVVD GK++GI+TRG+++R
Sbjct: 120 HEKHIRRLPVVDDTGKVLGILTRGDIIR 147
>gi|428779471|ref|YP_007171257.1| contains C-terminal CBS domains [Dactylococcopsis salina PCC 8305]
gi|428693750|gb|AFZ49900.1| putative transcriptional regulator, contains C-terminal CBS domains
[Dactylococcopsis salina PCC 8305]
Length = 153
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VV+P T + EA+++LVEK+I+G PV+D+ KLVG++S+ DL+ ++
Sbjct: 4 TVADIMTANP--AVVQPETPLKEAIKLLVEKKISGLPVVDEAEKLVGVLSEADLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G F +DS N Q K L K G+ VG++M+ V + L++AA+
Sbjct: 61 ---GVETPPYFMFLDSVIYLQNPAQYDKELHKALGQTVGEVMSDRAVSITGDRPLKEAAQ 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
L+ + + RRLPVVD GK+VGIITRG++VR
Sbjct: 118 LMHKREVRRLPVVDEAGKVVGIITRGDIVR 147
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT P VV+ T L++A +LL+E K LPVVD KLVG+++ +++
Sbjct: 3 KTVADIMTANPAVVQPETPLKEAIKLLVEKKISGLPVVDEAEKLVGVLSEADLM 56
>gi|354565001|ref|ZP_08984177.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
gi|353550127|gb|EHC19566.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
Length = 154
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + VV+P T + EA++IL E+RI+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMS--RDPIVVRPETPLKEAIQILAERRISGLPVVDDAGKLVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + K ++ L K G+ VG++M+ P+ V L +AA+++
Sbjct: 61 -GVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKQPITVSPDKTLREAAKIM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ RLPV+D++G+++GI+TRG+V+RA
Sbjct: 120 NDRNVHRLPVLDSEGQVIGILTRGDVIRA 148
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ P+VVR T L++A ++L E + LPVVD GKLVGII+ +++
Sbjct: 3 KTVADVMSRDPIVVRPETPLKEAIQILAERRISGLPVVDDAGKLVGIISETDLM 56
>gi|427731961|ref|YP_007078198.1| putative contains C-terminal CBS domains [Nostoc sp. PCC 7524]
gi|427367880|gb|AFY50601.1| putative transcriptional regulator, contains C-terminal CBS domains
[Nostoc sp. PCC 7524]
Length = 154
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ E VV+P T + EA++IL E+RI+G PV+DD KL+G++S+ DL+ ++
Sbjct: 4 TVADIMSP--EPIVVRPDTPLQEAIQILAERRISGLPVVDDVGKLLGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + K ++ L K G++VG++M+ PV + ++ AA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIYLKNPAVYERDLHKALGQIVGEVMSKNPVTITPDKTVKQAAQLM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ RLPV+D+ GK+VGI+TRG+++RA
Sbjct: 120 HDRNVHRLPVLDSIGKVVGILTRGDIIRA 148
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+P P+VVR T L++A ++L E + LPVVD GKL+GII+ +++
Sbjct: 3 KTVADIMSPEPIVVRPDTPLQEAIQILAERRISGLPVVDDVGKLLGIISETDLM 56
>gi|75908110|ref|YP_322406.1| signal transduction protein [Anabaena variabilis ATCC 29413]
gi|75701835|gb|ABA21511.1| Predicted signal transduction protein containing CBS domains
[Anabaena variabilis ATCC 29413]
Length = 152
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 94/151 (62%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ VVKP T + EA++IL E+RI+G PV+D+D KL+G++S+ DL+ ++
Sbjct: 4 TVADVMSHNPV--VVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N ++ L K G+ VG++M+ PV V +++ AA+
Sbjct: 61 -GVTPPAYIMF--LDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSVKQAAQ 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ + RLPV+D G+++GI+TRG+++RA
Sbjct: 118 LMHDRNVHRLPVLDDAGQVIGILTRGDIIRA 148
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ PVVV+ T L++A ++L E + LPVVD DGKL+GII+ +++
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56
>gi|17231305|ref|NP_487853.1| hypothetical protein alr3813 [Nostoc sp. PCC 7120]
gi|17132947|dbj|BAB75512.1| alr3813 [Nostoc sp. PCC 7120]
Length = 152
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 94/151 (62%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ VVKP T + EA++IL E+RI+G PV+D+D KL+G++S+ DL+ ++
Sbjct: 4 TVADVMSHNPV--VVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N ++ L K G+ VG++M+ PV V +++ AA+
Sbjct: 61 -GVTPPAYIMF--LDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSVKQAAQ 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ + RLPV+D G+++GI+TRG+++RA
Sbjct: 118 LMHDRNVHRLPVLDDAGQVIGILTRGDIIRA 148
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ PVVV+ T L++A ++L E + LPVVD DGKL+GII+ +++
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56
>gi|428770480|ref|YP_007162270.1| signal transduction protein [Cyanobacterium aponinum PCC 10605]
gi|428684759|gb|AFZ54226.1| putative signal transduction protein with CBS domains
[Cyanobacterium aponinum PCC 10605]
Length = 152
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ MT VKP T + EA+ +LVE +I+G PVI + +LVG++S+ DL+ ++
Sbjct: 4 TVGEVMTPNP--ITVKPETPLKEAIALLVEHKISGMPVIKEGGELVGILSESDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G M + + N K + K G+ V D+M+ P+ + T +++AA+LL
Sbjct: 61 -GVEPPPYIMILDSIIYLQNPNRYDKEIHKALGQTVADVMSDKPITISSTKTIKEAAQLL 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ + RRLPVVD+D K++GI+T+G+++RA
Sbjct: 120 HQKQIRRLPVVDSDKKIIGILTQGDIIRA 148
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K VG++MTP P+ V+ T L++A LL+E K +PV+ G+LVGI++ +++
Sbjct: 2 NKTVGEVMTPNPITVKPETPLKEAIALLVEHKISGMPVIKEGGELVGILSESDLM 56
>gi|414077401|ref|YP_006996719.1| hypothetical protein ANA_C12164 [Anabaena sp. 90]
gi|413970817|gb|AFW94906.1| CBS domain-containing protein [Anabaena sp. 90]
Length = 152
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 8/150 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ L V P T + EA++IL EK I+G PVIDD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMSRDPIL--VHPQTPLKEAIQILAEKHISGLPVIDDAGKLVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G + +DS N ++ L K G+ VG++M+ P+ + L +AA+
Sbjct: 61 ---GITPPAYIMILDSVIYLQNPATYERDLHKALGQTVGEVMSKNPLTISPDKPLREAAK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
L+ E K RLPV+D GK++GI+TRG+++R
Sbjct: 118 LIQEHKVHRLPVLDNAGKVIGILTRGDIIR 147
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ P++V T L++A ++L E LPV+D GKLVGII+ +++
Sbjct: 3 KTVADVMSRDPILVHPQTPLKEAIQILAEKHISGLPVIDDAGKLVGIISETDLM 56
>gi|113475881|ref|YP_721942.1| signal transduction protein [Trichodesmium erythraeum IMS101]
gi|110166929|gb|ABG51469.1| putative signal transduction protein with CBS domains
[Trichodesmium erythraeum IMS101]
Length = 153
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 82/137 (59%), Gaps = 6/137 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T + EA++IL EK I+G PV+DD+ KLVG+VS+ DL+ +S G +
Sbjct: 17 VKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQES----GVTPPPYIMLL 72
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ V ++MT P+ R L A+L+ E RLPVVD
Sbjct: 73 DSIIFLENPGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHRLPVVD 132
Query: 216 ADGKLVGIITRGNVVRA 232
+GK++GI+TRG+++RA
Sbjct: 133 ENGKVIGILTRGDIIRA 149
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K+V ++M+ P+ V+ T L++A ++L E LPVVD +GKLVGI++ +++
Sbjct: 3 NKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLM 57
>gi|443309785|ref|ZP_21039472.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
gi|442780178|gb|ELR90384.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
Length = 154
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 90/138 (65%), Gaps = 6/138 (4%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VVKP T ++EA++I+ E+RI+G PV+ DD +LVG++S+ DL+ ++ G MF
Sbjct: 15 VVKPQTPLNEAIKIMAERRISGLPVVGDDDRLVGIISETDLMWQET--GVTPPAYIMF-- 70
Query: 157 VDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+DS N ++ L K G+ VG++M+ P+ + L++AA+LL + RRLPVV
Sbjct: 71 LDSVIFLQNPATYERDLHKALGQTVGEVMSTDPITISADKPLKNAAQLLHDRDIRRLPVV 130
Query: 215 DADGKLVGIITRGNVVRA 232
DA+ +VGI+TRG+++RA
Sbjct: 131 DANNLVVGILTRGDIIRA 148
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V + MT PVVV+ T L +A +++ E + LPVV D +LVGII+ +++
Sbjct: 3 KTVAEAMTSLPVVVKPQTPLNEAIKIMAERRISGLPVVGDDDRLVGIISETDLM 56
>gi|428202316|ref|YP_007080905.1| putative contains C-terminal CBS domains [Pleurocapsa sp. PCC 7327]
gi|427979748|gb|AFY77348.1| putative transcriptional regulator, contains C-terminal CBS domains
[Pleurocapsa sp. PCC 7327]
Length = 153
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 92/152 (60%), Gaps = 9/152 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VKP T ++EA+++L EK I+G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVADVMTPNP--IAVKPQTPLNEAIKLLCEKHISGMPVVDDAGKLVGVISESDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N +K + K G+ VG++MT P+ + +L++AAR
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMTDKPISITPDRSLKEAAR 117
Query: 202 LLLETKYRRLPVVDA-DGKLVGIITRGNVVRA 232
++ E K RRL VVD DGK +GI+T+G+++RA
Sbjct: 118 IMHEKKIRRLVVVDGEDGKAIGILTQGDIIRA 149
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+ V+ T L +A +LL E +PVVD GKLVG+I+ +++
Sbjct: 3 KTVADVMTPNPIAVKPQTPLNEAIKLLCEKHISGMPVVDDAGKLVGVISESDLM 56
>gi|428206039|ref|YP_007090392.1| putative signal transduction protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428007960|gb|AFY86523.1| putative signal transduction protein with CBS domains
[Chroococcidiopsis thermalis PCC 7203]
Length = 154
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + VV+P T++ +A+++L EKRI+G PV+DD KL+G +S+ DL+ ++
Sbjct: 4 TVADVMT--RDPIVVRPETSLHDAIKLLAEKRISGLPVVDDAGKLIGTISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + K + ++ L K G+ VG++M+ + V L DAA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIFLKNPAQYERDLHKALGQTVGEVMSQDLITVAPDKPLRDAAQLM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVR 231
+ K RLPVVD GK++GI+TRG++VR
Sbjct: 120 HDRKIPRLPVVDPSGKVIGILTRGDIVR 147
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT P+VVR T+L DA +LL E + LPVVD GKL+G I+ +++
Sbjct: 3 KTVADVMTRDPIVVRPETSLHDAIKLLAEKRISGLPVVDDAGKLIGTISETDLM 56
>gi|428212235|ref|YP_007085379.1| hypothetical protein Oscil6304_1781 [Oscillatoria acuminata PCC
6304]
gi|428000616|gb|AFY81459.1| CBS-domain-containing membrane protein [Oscillatoria acuminata PCC
6304]
Length = 154
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 94/162 (58%), Gaps = 13/162 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT + VV T++DEA++I+ E+R +G PV+D KL+G++S DL+ +S
Sbjct: 4 TVAEIMT--RDPIVVTSQTSLDEAIQIMAERRFSGLPVVDAAGKLIGIISQGDLMWRES- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G +DS N + Q+ L K G+ VG++M+ P +R +L +AA
Sbjct: 61 ---GVTPPPYIMVLDSVIYLENPAKYQRDLHKALGQTVGEVMSTNPQTIRPEKSLREAAE 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
L+ E RLPV+D++GK +GI+TRG++VRA ATE G
Sbjct: 118 LMHEKGVHRLPVIDSEGKPIGILTRGDIVRAM-----ATEEG 154
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 41/54 (75%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V ++MT P+VV T+L++A +++ E ++ LPVVDA GKL+GII++G+++
Sbjct: 3 KTVAEIMTRDPIVVTSQTSLDEAIQIMAERRFSGLPVVDAAGKLIGIISQGDLM 56
>gi|434384451|ref|YP_007095062.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
gi|428015441|gb|AFY91535.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
Length = 152
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M EL VKP+T + +A+++LV++ I+G PVIDDD KLVG++S+ DL+ +
Sbjct: 5 VADWMN--RELITVKPSTPLADAVKLLVDRHISGLPVIDDDGKLVGVISEADLMWREQ-- 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G + +F +K + L K G+ VG++MTP + + T L +AAR+L
Sbjct: 61 GLEQPPYMIFLGGVIYFKNPLTYDRDLHKALGQTVGEVMTPHAISISADTTLPEAARILH 120
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ K RLPVVD + + +GIIT ++VRA
Sbjct: 121 DKKIHRLPVVDENDRPIGIITESDIVRA 148
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K+V D M + V+ +T L DA +LL++ LPV+D DGKLVG+I+ +++
Sbjct: 3 KIVADWMNRELITVKPSTPLADAVKLLVDRHISGLPVIDDDGKLVGVISEADLM 56
>gi|357475267|ref|XP_003607919.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508974|gb|AES90116.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 77
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MT K LHVVK TT+VDEALE LV+ RI+G PVID++W LVG+VSDYDLLA+D+ISGS
Sbjct: 1 MTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGVVSDYDLLAIDTISGS-- 58
Query: 149 ADNSMFPEVD 158
+D S+ P VD
Sbjct: 59 SDASLIPIVD 68
>gi|304570678|ref|YP_001805580.2| hypothetical protein cce_4166 [Cyanothece sp. ATCC 51142]
gi|354552638|ref|ZP_08971946.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
gi|353555960|gb|EHC25348.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
Length = 153
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%), Gaps = 7/141 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA++IL EK+I+G PV+DD KLVG++S+ DL+ + +G +
Sbjct: 16 VTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE----TGVEPPPYIMIL 71
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ VG++M+ P+ ++ T +L++AA L+ E K RRLPV+D
Sbjct: 72 DSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLPVID 131
Query: 216 ADG-KLVGIITRGNVVRAALQ 235
+ K++GI+T+G+++R Q
Sbjct: 132 ENNTKVIGILTQGDIIRTMAQ 152
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V +MT P+ V T L +A ++L E K LPVVD GKLVGII+ +++
Sbjct: 3 KTVAQVMTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLM 56
>gi|428778151|ref|YP_007169938.1| signal transduction protein [Halothece sp. PCC 7418]
gi|428692430|gb|AFZ45724.1| putative signal transduction protein with CBS domains [Halothece
sp. PCC 7418]
Length = 152
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VV+P T + EA+++LVEK+I+G PV++ D KLVG++S+ DL+ ++
Sbjct: 4 TVADVMTANPA--VVQPDTPLKEAIKVLVEKKISGLPVVNKDGKLVGVLSEADLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N +K L K G+ V ++MT + + L++AA
Sbjct: 61 -GVNPPPYFMF--LDSVIYLENPARYEKELHKALGQTVEEVMTDRAISITGDRPLKEAAH 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
L+ + + RRLPV+D +GK+VGIITRG++VR
Sbjct: 118 LMHKREVRRLPVLDDEGKVVGIITRGDIVR 147
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT P VV+ T L++A ++L+E K LPVV+ DGKLVG+++ +++
Sbjct: 3 KTVADVMTANPAVVQPDTPLKEAIKVLVEKKISGLPVVNKDGKLVGVLSEADLM 56
>gi|171700533|gb|ACB53514.1| unknown [Cyanothece sp. ATCC 51142]
Length = 145
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%), Gaps = 7/141 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA++IL EK+I+G PV+DD KLVG++S+ DL+ + +G +
Sbjct: 8 VTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE----TGVEPPPYIMIL 63
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ VG++M+ P+ ++ T +L++AA L+ E K RRLPV+D
Sbjct: 64 DSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLPVID 123
Query: 216 ADG-KLVGIITRGNVVRAALQ 235
+ K++GI+T+G+++R Q
Sbjct: 124 ENNTKVIGILTQGDIIRTMAQ 144
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
MT P+ V T L +A ++L E K LPVVD GKLVGII+ +++
Sbjct: 1 MTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLM 48
>gi|300868882|ref|ZP_07113488.1| signal transduction protein [Oscillatoria sp. PCC 6506]
gi|300333099|emb|CBN58680.1| signal transduction protein [Oscillatoria sp. PCC 6506]
Length = 175
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT L +P + EA++IL E+RI+G PV+D++ KLVG++S+ DL+ +
Sbjct: 26 TVADVMTRDPIL--ARPEMPLSEAIKILAERRISGLPVVDENEKLVGVISETDLMWQEV- 82
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G + +DS N ++ L K G+ VG++M+ P+ +L +AAR
Sbjct: 83 ---GVTPPAYIMLLDSVIYLENPGRYERELHKALGQTVGEVMSRDPITTTPDKSLPEAAR 139
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ E RLPV+D GK +GI+TRG++VRA
Sbjct: 140 LMHERSIHRLPVIDPTGKAIGILTRGDIVRA 170
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
+ N + ++ KT V D+MT P++ R L +A ++L E + LPVVD + KLV
Sbjct: 14 REINRIPPIMPKT----VADVMTRDPILARPEMPLSEAIKILAERRISGLPVVDENEKLV 69
Query: 222 GIITRGNVV 230
G+I+ +++
Sbjct: 70 GVISETDLM 78
>gi|16331252|ref|NP_441980.1| photosystem I assembly protein [Synechocystis sp. PCC 6803]
gi|383322995|ref|YP_005383848.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326164|ref|YP_005387017.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492048|ref|YP_005409724.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437316|ref|YP_005652040.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|451815408|ref|YP_007451860.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|1001427|dbj|BAA10050.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|339274348|dbj|BAK50835.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|359272314|dbj|BAL29833.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275484|dbj|BAL33002.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278654|dbj|BAL36171.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961369|dbj|BAM54609.1| photosystem I assembly protein [Bacillus subtilis BEST7613]
gi|451781377|gb|AGF52346.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
Length = 155
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ MT VKP T + +A+ +L E RI+G PV+DD KLVG++SD DL+ +
Sbjct: 4 TVGEVMTPNP--ITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVISDTDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
SG M +DS N ++ L K G+ VG++M P+ + T L +AA
Sbjct: 60 SGVDTPPYVML--LDSIIYLQNPARHERELHKALGQTVGEVMNDVPISILPTQTLREAAH 117
Query: 202 LLLETKYRRLPVVDADGK-LVGIITRGNVVRA 232
L+ E K RRLPV++ + + L+GI+T+G+++RA
Sbjct: 118 LMNEKKIRRLPVLNVESRQLIGILTQGDIIRA 149
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+ VG++MTP P+ V+ T L+DA RLL E + +PV+D KLVG+I+
Sbjct: 3 RTVGEVMTPNPITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVIS 51
>gi|308809011|ref|XP_003081815.1| unnamed protein product [Ostreococcus tauri]
gi|116060282|emb|CAL55618.1| unnamed protein product [Ostreococcus tauri]
Length = 285
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA--DNSMFP 155
V P +V EA+++LVE RI+ PV+D+ ++G+VS+YDL+A + R+ D+ MFP
Sbjct: 81 VGPNASVFEAMKLLVENRISAVPVVDEKGVVLGVVSEYDLMARVGKKETTRSVKDDGMFP 140
Query: 156 ----------EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
V W F+ +Q+ + K +G V M P T L +A L+L+
Sbjct: 141 RVGRCDEFNGNVKQMWNQFHNLQERMYKASGTKVLTAMHETPATCTPDTPLVEATELMLD 200
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
RLPVVD G L+GI++RG+++R Q
Sbjct: 201 KNLARLPVVDERGALLGILSRGDIMRRTFQ 230
>gi|428312214|ref|YP_007123191.1| contains C-terminal CBS domains [Microcoleus sp. PCC 7113]
gi|428253826|gb|AFZ19785.1| putative transcriptional regulator, contains C-terminal CBS domains
[Microcoleus sp. PCC 7113]
Length = 155
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + +VKP T + EA++IL E+RI+G PV+DD LVG++S+ DLL ++
Sbjct: 4 TVADVMS--RDPIMVKPQTPIKEAIKILAEQRISGLPVVDDAGSLVGVISETDLLWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N ++ L K G+ VG++M+ PV V L AA+
Sbjct: 61 -GVEPPIYIMF--LDSVIFLENPARHEQELHKALGQTVGEVMSTNPVTVESDQPLRKAAK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ E RRL VV+ GK++GI+T G++VRA
Sbjct: 118 LMQEKSIRRLAVVNDQGKVIGILTPGDIVRA 148
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ P++V+ T +++A ++L E + LPVVD G LVG+I+ +++
Sbjct: 2 AKTVADVMSRDPIMVKPQTPIKEAIKILAEQRISGLPVVDDAGSLVGVISETDLL 56
>gi|119511029|ref|ZP_01630149.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
gi|119464280|gb|EAW45197.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
Length = 165
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V++ T + EA++IL EKRI+G PV+DD KLVG++S+ DL+ ++
Sbjct: 17 TVTDIMT--RDPIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETDLMWQET- 73
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N + L K G+ VG++M+ PV + +++AA+
Sbjct: 74 -GVTPPAYIMF--LDSVIYLQNPATYDRELHKALGQTVGEVMSKNPVTIAPEKTVKEAAQ 130
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ + RLPV+D+ ++VGI+TRG++VRA
Sbjct: 131 LMHDRSVHRLPVIDSQSQVVGIVTRGDIVRA 161
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
K +SK K V D+MT P+V+R T L++A ++L E + +PVVD GKLVGII+ +
Sbjct: 8 KGISKQMSKTVTDIMTRDPIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETD 67
Query: 229 VV 230
++
Sbjct: 68 LM 69
>gi|307153353|ref|YP_003888737.1| hypothetical protein Cyan7822_3520 [Cyanothece sp. PCC 7822]
gi|306983581|gb|ADN15462.1| CBS domain containing protein [Cyanothece sp. PCC 7822]
Length = 153
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 92/152 (60%), Gaps = 9/152 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT + V P T + EA++++ EK+I+G PV+++ LVG++S+ DL+ +
Sbjct: 4 TVGDVMTHNP--YTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N +K + K G+ VG++M+ P+ ++ L +AA+
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMSDKPISIKAYQPLREAAQ 117
Query: 202 LLLETKYRRLPVVD-ADGKLVGIITRGNVVRA 232
L+ + K RRLPV+D + K++GIITRG+++RA
Sbjct: 118 LMHDKKIRRLPVIDETEAKVIGIITRGDIIRA 149
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K VGD+MT P V T L +A +L+ E K LPVV+ G LVG+I+ +++
Sbjct: 3 KTVGDVMTHNPYTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLM 56
>gi|218248686|ref|YP_002374057.1| hypothetical protein PCC8801_3960 [Cyanothece sp. PCC 8801]
gi|257061751|ref|YP_003139639.1| hypothetical protein Cyan8802_4005 [Cyanothece sp. PCC 8802]
gi|218169164|gb|ACK67901.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
gi|256591917|gb|ACV02804.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
Length = 153
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 85/134 (63%), Gaps = 7/134 (5%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T + EA+ IL EKRI+G PV+DD KLVG++S+ DL+ + +G +DS
Sbjct: 20 TPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLMWQE----TGVEPPPYIMILDSVI 75
Query: 162 KTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
N +K + K G+ VG++M+ P+ ++ + +L +AA+++ E K RRLPVVD GK
Sbjct: 76 YLQNPARYEKEIHKALGQTVGEVMSNHPISIKSSQSLREAAQIMHEKKIRRLPVVDETGK 135
Query: 220 -LVGIITRGNVVRA 232
++GI+T+G+++R+
Sbjct: 136 QVIGILTQGDIIRS 149
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K+V D+MTP + V T L +A R+L E + LPVVD GKLVG+I+ +++
Sbjct: 3 KIVADVMTPNAITVTRQTPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLM 56
>gi|282896431|ref|ZP_06304452.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
gi|281198719|gb|EFA73599.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
Length = 152
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV MT + V P T + +A++IL EK+I+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N ++ L K G+ VG++M+ P+ + +L+ AA+
Sbjct: 61 -GITPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKAAAK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
++ + K RRLPVVD ++GI+TRG+++RA
Sbjct: 118 IIQDHKVRRLPVVDDSATVIGILTRGDIIRA 148
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V +MT P++V T L+ A ++L E + LPVVD GKLVGII+ +++
Sbjct: 3 KTVAQVMTHNPIMVNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLM 56
>gi|427709353|ref|YP_007051730.1| putative signal transduction protein [Nostoc sp. PCC 7107]
gi|427361858|gb|AFY44580.1| putative signal transduction protein with CBS domains [Nostoc sp.
PCC 7107]
Length = 164
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + VV+ T + EA++IL EKRI+G PV+DD KLVG++S+ DL+ ++
Sbjct: 16 TVADVMS--RDPIVVRAETPLKEAIKILAEKRISGLPVVDDVGKLVGIISETDLMWQET- 72
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + K + L K G+ VG++M+ V + L++AA+++
Sbjct: 73 -GVTPPAYIMFLDSVIYLKNPATYDRDLHKALGQTVGEVMSKNAVTISPNKTLKEAAQMM 131
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
RLPV+D +G++VGI+TRG+V+RA
Sbjct: 132 HNRNVHRLPVLDTEGQVVGILTRGDVIRA 160
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
N V K +SKT V D+M+ P+VVR T L++A ++L E + LPVVD GKLVGII
Sbjct: 7 NGVCKQMSKT----VADVMSRDPIVVRAETPLKEAIKILAEKRISGLPVVDDVGKLVGII 62
Query: 225 TRGNVV 230
+ +++
Sbjct: 63 SETDLM 68
>gi|434399856|ref|YP_007133860.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
gi|428270953|gb|AFZ36894.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
Length = 153
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 90/150 (60%), Gaps = 8/150 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT+ V+ P T + EA++IL E +I+G PV+D+ KLVG++S+ DL+ ++
Sbjct: 4 TVADVMTSSPI--VITPQTALKEAIKILAEHKISGLPVVDEAGKLVGVLSETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G M +DS N +K + K G+ V ++M+ P+ ++ ++++AA
Sbjct: 61 -GVDPPPYIML--LDSVIYLQNPARYEKEIHKALGQTVAEVMSDRPITIKPHQSVKEAAH 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
L+ E + RRLPV+D +VGIIT+G+++R
Sbjct: 118 LMHEKRIRRLPVIDEHNHIVGIITQGDIIR 147
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT +P+V+ T L++A ++L E K LPVVD GKLVG+++ +++
Sbjct: 3 KTVADVMTSSPIVITPQTALKEAIKILAEHKISGLPVVDEAGKLVGVLSETDLM 56
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
+KP +V EA ++ EKRI PVID+ +VG+++ D++ +
Sbjct: 106 IKPHQSVKEAAHLMHEKRIRRLPVIDEHNHIVGIITQGDIIRM 148
>gi|434406932|ref|YP_007149817.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
gi|428261187|gb|AFZ27137.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
Length = 152
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + VV+ T + EA++ L EKRI+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMTC--DPIVVRRETPLKEAIQTLAEKRISGLPVVDDVEKLVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N ++ L K G+ VG++M+ P+ + L +AA+
Sbjct: 61 -GVTPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSKNPITISPDKTLREAAK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ + RLPV+D+ G+++GI+TRG+++R+
Sbjct: 118 LMHDRSIHRLPVLDSAGQVIGILTRGDIIRS 148
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT P+VVR T L++A + L E + LPVVD KLVGII+ +++
Sbjct: 3 KTVADVMTCDPIVVRRETPLKEAIQTLAEKRISGLPVVDDVEKLVGIISETDLM 56
>gi|282899529|ref|ZP_06307493.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
gi|281195408|gb|EFA70341.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
Length = 152
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 91/150 (60%), Gaps = 8/150 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV MT + V P T + +A++IL EK+++G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N ++ L K G+ VG++M+ P+ + +L+ AA+
Sbjct: 61 -GITPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKTAAK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
++ + K RRLPVVD G ++GI+TRG+++R
Sbjct: 118 IIQDHKVRRLPVVDDAGTVIGILTRGDIIR 147
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V +MT P++V T L+ A ++L E + LPVVD GKLVGII+ +++
Sbjct: 3 KTVAQVMTHNPIMVNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLM 56
>gi|261402855|ref|YP_003247079.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261369848|gb|ACX72597.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 158
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 16/157 (10%)
Query: 88 FMTTKEELHVVKPTTTVD-----EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
FM K+ + KP T D E +++ EKRI+G PV++DD +LVG++S+ D++ +
Sbjct: 4 FMLVKDVMK--KPITVKDNDDLTEVIKLFREKRISGAPVLNDDGELVGIISESDIIK--T 59
Query: 143 ISGSGRADNSMFPE----VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
++ N + P ++ KT E ++ L K V D+MT VV +
Sbjct: 60 LTTHDEDLNLILPSPLDLIELPLKTAIKIEEFKEDLKKALKTKVKDVMTKDVVVAKPDMT 119
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ DAA+L++E K +RLPVVD DGKL+GIITRG+++ A
Sbjct: 120 INDAAKLMVEHKIKRLPVVDEDGKLIGIITRGDIIEA 156
>gi|440682247|ref|YP_007157042.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
gi|428679366|gb|AFZ58132.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
Length = 152
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 91/150 (60%), Gaps = 8/150 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VV T + EA++IL EKRI+G PVI++ KLVG++S+ DL+ ++
Sbjct: 4 TVADVMTINP--IVVSLETPLKEAIQILAEKRISGLPVINNAGKLVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N + L K G+ VG++M+ P+ + +L++AA+
Sbjct: 61 -GVTPPAYIMF--LDSVIYLQNPATYDRDLHKALGQTVGEVMSKNPLTITPDKSLKEAAK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
++ E K RLPV+D G+++GI+TRG+++R
Sbjct: 118 IIQEHKVHRLPVLDNAGQVIGILTRGDIIR 147
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT P+VV T L++A ++L E + LPV++ GKLVGII+ +++
Sbjct: 3 KTVADVMTINPIVVSLETPLKEAIQILAEKRISGLPVINNAGKLVGIISETDLM 56
>gi|218441822|ref|YP_002380151.1| hypothetical protein PCC7424_4929 [Cyanothece sp. PCC 7424]
gi|218174550|gb|ACK73283.1| CBS domain containing protein [Cyanothece sp. PCC 7424]
Length = 153
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V P T + EA++++ EK I+G PV++D LVG++S+ DL+ +
Sbjct: 4 TVKDVMTPNP--YTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N + K + K G+ VG++M+ P+ V+ L +AA+
Sbjct: 60 --TGVETPPYIMILDSVIYLQNPARYDKEIHKALGQTVGEVMSDKPITVKPDQPLREAAQ 117
Query: 202 LLLETKYRRLPVVD-ADGKLVGIITRGNVVRA 232
L+ + K RRLPV++ A GK++GIIT G+++RA
Sbjct: 118 LMHDKKIRRLPVIESAQGKVIGIITSGDIIRA 149
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P V T L++A +L+ E LPVV+ G LVG+I+ +++
Sbjct: 3 KTVKDVMTPNPYTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLM 56
>gi|428223589|ref|YP_007107686.1| putative signal transduction protein [Geitlerinema sp. PCC 7407]
gi|427983490|gb|AFY64634.1| putative signal transduction protein with CBS domains [Geitlerinema
sp. PCC 7407]
Length = 153
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V+P + +A++IL +KRI+G PV+D KLVG++S+ DL+ +S
Sbjct: 4 TVADVMT--RDPITVQPDAPLKDAIQILADKRISGLPVVDQSGKLVGVISETDLMWRES- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G + +DS N + + L K G+ VG++M+ PV + L +AAR
Sbjct: 61 ---GVTPPAYIMLLDSVIYLENPARYDRDLHKALGQSVGEVMSRDPVTISPDKTLGEAAR 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+L E RLPV+D ++VGI+TRG+VVRA
Sbjct: 118 ILHERSVHRLPVIDDQHRIVGILTRGDVVRA 148
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+ V D+MT P+ V+ L+DA ++L + + LPVVD GKLVG+I+ +++
Sbjct: 2 ARTVADVMTRDPITVQPDAPLKDAIQILADKRISGLPVVDQSGKLVGVISETDLM 56
>gi|427716841|ref|YP_007064835.1| putative signal transduction protein [Calothrix sp. PCC 7507]
gi|427349277|gb|AFY32001.1| putative signal transduction protein with CBS domains [Calothrix
sp. PCC 7507]
Length = 154
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ VV+ T + EA++IL E+RI+G PV+DD +LVG++S+ DL+ +
Sbjct: 4 TVDDVMSRNPI--VVRTETPLKEAIQILAERRISGLPVVDDAGQLVGIISETDLMWQQT- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + + + ++ L K G+ VG++M+ P+ + + +AA+++
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPGDYERDLHKALGQTVGEVMSKNPITISPEKTVREAAKIM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ RLPV+D+ G+++GI+TRG++VRA
Sbjct: 120 HDRHVHRLPVLDSAGQVIGILTRGDIVRA 148
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ P+VVR T L++A ++L E + LPVVD G+LVGII+ +++
Sbjct: 3 KTVDDVMSRNPIVVRTETPLKEAIQILAERRISGLPVVDDAGQLVGIISETDLM 56
>gi|428773730|ref|YP_007165518.1| hypothetical protein Cyast_1914 [Cyanobacterium stanieri PCC 7202]
gi|428688009|gb|AFZ47869.1| CBS domain containing membrane protein [Cyanobacterium stanieri PCC
7202]
Length = 153
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V P T + EA+ IL EK+++G PV+D + KLVG++S+ DL+ ++
Sbjct: 4 TVADIMTPSP--ITVNPDTPLKEAITILAEKKLSGLPVVDKNNKLVGVISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G M + + N +K + K G+ VG++MT + ++ +++ AA++L
Sbjct: 61 -GVEPPPYIMILDSVIYLQNPNRYEKEIHKALGQTVGEVMTNKAITIKSDDSVKRAAQIL 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E K RLPVVD +G +VGI+T+G++++A
Sbjct: 120 HEKKIGRLPVVDGNGNVVGIVTQGDIIQA 148
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
K V D+MTP+P+ V T L++A +L E K LPVVD + KLVG+I+
Sbjct: 2 NKTVADIMTPSPITVNPDTPLKEAITILAEKKLSGLPVVDKNNKLVGVISE 52
>gi|166364594|ref|YP_001656867.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
gi|166086967|dbj|BAG01675.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
Length = 155
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GIITRG+++R
Sbjct: 120 YDRHVRRLPVIEEETHKVIGIITRGDIIR 148
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56
>gi|425466366|ref|ZP_18845667.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
gi|389831135|emb|CCI26307.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
Length = 170
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 19 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 74
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 75 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 134
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GIITRG+++R
Sbjct: 135 YDRHVRRLPVIEEETHKVIGIITRGDIIR 163
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 18 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 71
>gi|416393971|ref|ZP_11686062.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
gi|357263398|gb|EHJ12414.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
Length = 153
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 93/155 (60%), Gaps = 9/155 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV MT ++ V P T + EA++I+ EKRI+G PV+D+ KL+G++S+ DL+ +
Sbjct: 4 TVAQVMT--QDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N + K + K G+ VG++M+ P+ ++ T +L++AA
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARHDKEIHKALGQTVGEVMSDKPISIKATQSLKEAAH 117
Query: 202 LLLETKYRRLPVVDADG-KLVGIITRGNVVRAALQ 235
++ E K RRLPV+D + ++GI+T+G+++R Q
Sbjct: 118 IMHEKKIRRLPVLDENNTTVIGILTQGDIIRTMAQ 152
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V +MT P+ V T L +A +++ E + LPVVD GKL+G+I+ +++
Sbjct: 2 AKTVAQVMTQDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLM 56
>gi|425440870|ref|ZP_18821165.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
gi|389718595|emb|CCH97477.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
Length = 170
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 19 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 74
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 75 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 134
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GIITRG+++R
Sbjct: 135 YDRHVRRLPVIEEETHKVIGIITRGDIIR 163
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 18 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 71
>gi|425444260|ref|ZP_18824315.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|425454352|ref|ZP_18834098.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
gi|389730388|emb|CCI05322.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|389804998|emb|CCI15532.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
Length = 155
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GIITRG+++R
Sbjct: 120 YDRHVRRLPVIEEETHKVIGIITRGDIIR 148
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 56
>gi|390437672|ref|ZP_10226201.1| IMP dehydrogenase [Microcystis sp. T1-4]
gi|389838870|emb|CCI30323.1| IMP dehydrogenase [Microcystis sp. T1-4]
Length = 155
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 89/149 (59%), Gaps = 10/149 (6%)
Query: 91 TKEELHVVKPT-------TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TK H++ P T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 2 TKTVAHIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GIITRG+++R
Sbjct: 120 YDRHVRRLPVIEEETHKVIGIITRGDIIR 148
>gi|254410111|ref|ZP_05023891.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183147|gb|EDX78131.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 156
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 6/139 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA++IL E+RI+G V++D KLVG++S+ DLL +G +
Sbjct: 16 VSPQTPIREAMKILAERRISGLLVVNDVGKLVGIISETDLLW----QQTGVEPPVYIVFL 71
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N ++ L K G+ VG++MT APVVV+ L AA+L+ + RRL V D
Sbjct: 72 DSVIYLENPARYEEELHKALGQTVGEVMTHAPVVVKPDQPLRKAAKLMQDKSLRRLAVTD 131
Query: 216 ADGKLVGIITRGNVVRAAL 234
GK++G++T G++VRA +
Sbjct: 132 NQGKVIGVLTAGDIVRAMI 150
>gi|427733825|ref|YP_007053369.1| putative contains C-terminal CBS domains [Rivularia sp. PCC 7116]
gi|427368866|gb|AFY52822.1| putative transcriptional regulator, contains C-terminal CBS domains
[Rivularia sp. PCC 7116]
Length = 154
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VK T + EA++IL EKRI+G PV+DD L+G++S+ DL+ +G + F
Sbjct: 16 VKTDTPLREAIKILAEKRISGLPVVDDAGHLIGIISETDLMW----QQAGVTPPAYFMIF 71
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N E ++ L K G+ VG++M+ P+ + L +AA+++ + K RLPVVD
Sbjct: 72 DSVIYLKNPIEYERELHKALGQTVGEVMSQKPITISPDKPLREAAKIMRDRKIHRLPVVD 131
Query: 216 ADGKLVGIITRGNVVRAALQIK 237
++VGI++ G+++R Q++
Sbjct: 132 DSEQIVGILSLGDIIRDMAQVE 153
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V ++MT P+ V+ T L +A ++L E + LPVVD G L+GII+ +++
Sbjct: 3 KNVSEVMTSNPITVKTDTPLREAIKILAEKRISGLPVVDDAGHLIGIISETDLM 56
>gi|422302415|ref|ZP_16389778.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
gi|159028228|emb|CAO88038.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389788411|emb|CCI16008.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
Length = 155
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GI+TRG+++R
Sbjct: 120 YDRHVRRLPVIEEETHKVIGIVTRGDIIR 148
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56
>gi|389690008|ref|ZP_10179025.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589526|gb|EIM29814.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 230
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 90/152 (59%), Gaps = 16/152 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MTT + V+P ++ E ++L + I+G PV+ D+ +L+G+VS+ DL+ +
Sbjct: 3 TAADVMTTA--VITVRPEMSIHEIAKLLCDHHISGVPVVGDNGQLLGIVSEGDLIGHAGL 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLL----SKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G R S W+TF K+L +K++G+ D+MT V V ETT++ D
Sbjct: 61 AGEQR---------RSWWQTFLSGPKVLAQHYAKSHGRTASDVMTKEVVTVLETTSVADT 111
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
AR L + + +RLPV+ +G+L+GI+TR N+++
Sbjct: 112 ARALEQHRIKRLPVLR-NGRLIGIVTRSNLLQ 142
>gi|425434032|ref|ZP_18814504.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|425451953|ref|ZP_18831772.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|425458721|ref|ZP_18838209.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
gi|389678231|emb|CCH92908.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|389766445|emb|CCI07898.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|389825055|emb|CCI25515.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
Length = 155
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GI+TRG+++R
Sbjct: 120 YDRHVRRLPVIEEETHKVIGIVTRGDIIR 148
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 56
>gi|425468697|ref|ZP_18847691.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
gi|389884638|emb|CCI35074.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
Length = 170
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T+ D MT V T++ EA++IL EKR +G PV+DD +L+G++S+ DL+ +
Sbjct: 19 TIADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDKMRLIGVISETDLMWQE-- 74
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 75 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 134
Query: 204 LETKYRRLPVVDAD-GKLVGIITRGNVVR 231
+ RRLPV++ + K++GIITRG+++R
Sbjct: 135 YDRHVRRLPVIEEETHKVIGIITRGDIIR 163
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K + D+MTP P+ V T+L +A ++L E ++ LPVVD +L+G+I+ +++
Sbjct: 18 KTIADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDKMRLIGVISETDLM 71
>gi|428315835|ref|YP_007113717.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
gi|428239515|gb|AFZ05301.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
Length = 166
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ E + +P ++EA++IL ++RI+G PV+D++ LVG++S+ DL+ +S
Sbjct: 17 TVADVMS--REPILARPEMPLNEAIKILADRRISGLPVVDENDLLVGVISETDLMWRES- 73
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G + +DS N ++ L K G+ VG+ M+ PV + ++ +AA+
Sbjct: 74 ---GVTPPAYIMVLDSVIYLENPSRYERELHKALGQTVGEAMSTDPVTIGPDKSVPEAAK 130
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ + RLPVVD+ GK++GI+TRG+++R+
Sbjct: 131 LMHDRSIHRLPVVDSAGKVIGILTRGDIIRS 161
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ P++ R L +A ++L + + LPVVD + LVG+I+ +++
Sbjct: 16 KTVADVMSREPILARPEMPLNEAIKILADRRISGLPVVDENDLLVGVISETDLM 69
>gi|186685839|ref|YP_001869035.1| signal transduction protein [Nostoc punctiforme PCC 73102]
gi|186468291|gb|ACC84092.1| putative signal transduction protein with CBS domains [Nostoc
punctiforme PCC 73102]
Length = 154
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + VV+ T + EA++IL E+ I+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMS--RDPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G MF + K ++ L K G+ VG++M+ P+ + L++AA ++
Sbjct: 61 -GVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKNPIAISPDKTLKEAATIM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ RLPV+D +++GI+TRG+++RA
Sbjct: 120 HDRSVHRLPVLDGTDQVIGILTRGDIIRA 148
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+M+ P+VVR T L++A ++L E LPVVD GKLVGII+ +++
Sbjct: 3 KTVADVMSRDPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLM 56
>gi|334118778|ref|ZP_08492866.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
gi|333459008|gb|EGK87623.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
Length = 166
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + L +P ++EA++IL +RI+G PV+D++ LVG++S+ DL+ ++
Sbjct: 17 TVADVMSREPIL--ARPEMPLNEAIKILANRRISGLPVVDENDLLVGVISETDLMWRET- 73
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G + +DS N ++ L K G+ VG+ M+ P+ + ++++AA+
Sbjct: 74 ---GVTPPAYIMVLDSVIYLENPSRYERDLHKALGQTVGEAMSKEPITIGPDKSVQEAAK 130
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ + RLPVVD+ GK++GI+TRG+++R+
Sbjct: 131 LMHDRSIHRLPVVDSAGKVIGILTRGDIIRS 161
>gi|443663854|ref|ZP_21133242.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
gi|443331736|gb|ELS46380.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
Length = 147
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ + +G M +
Sbjct: 8 VTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE--TGVEAPPYIMLLDS 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +KLL K G+ VG++MT P+ + L++AA L+ + RRLPV++ +
Sbjct: 66 VIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEE 125
Query: 218 -GKLVGIITRGNVVR 231
K++GI+TRG+++R
Sbjct: 126 THKVIGIVTRGDIIR 140
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 1 MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 48
>gi|440752011|ref|ZP_20931214.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
gi|440176504|gb|ELP55777.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
Length = 147
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ + +G M +
Sbjct: 8 VTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE--TGVEAPPYIMLLDS 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +KLL K G+ VG++MT P+ + L++AA L+ + RRLPV++ +
Sbjct: 66 VIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEE 125
Query: 218 -GKLVGIITRGNVVR 231
K++GI+TRG+++R
Sbjct: 126 THKVIGIVTRGDIIR 140
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 1 MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 48
>gi|56752279|ref|YP_172980.1| hypothetical protein syc2270_d [Synechococcus elongatus PCC 6301]
gi|81300633|ref|YP_400841.1| hypothetical protein Synpcc7942_1824 [Synechococcus elongatus PCC
7942]
gi|24251259|gb|AAN46179.1| unknown protein [Synechococcus elongatus PCC 7942]
gi|56687238|dbj|BAD80460.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169514|gb|ABB57854.1| CBS [Synechococcus elongatus PCC 7942]
Length = 154
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV DFMT + VKP T + EA+ IL +K I+G PV+D+ +LVG++S+ DL+ +S
Sbjct: 4 TVADFMT--RDPISVKPQTPLTEAIRILADKHISGLPVVDEAGQLVGVLSETDLMWRES- 60
Query: 144 SGSGRADNSMFPEV-DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
G + +V DS N ++ L K G+ V ++MT P+ + L +AA
Sbjct: 61 ---GVPTPPPYIQVLDSFIYLENPARYEQELHKALGETVAEVMTAQPLTIAADRPLPEAA 117
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
RL + K RL V+ D ++VG+ITRG+++RA Q
Sbjct: 118 RLFNDRKVHRLFVLSGDHQVVGVITRGDIIRAMAQ 152
>gi|354566510|ref|ZP_08985682.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
gi|353545526|gb|EHC14977.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
Length = 155
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 16/154 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT VKPT +V+ L L E I+G PV+D+ K+VG+VS+ DLL
Sbjct: 8 VKDLMTTDP--VTVKPTDSVETVLRCLEENHISGLPVVDETGKVVGVVSEADLLF----- 60
Query: 145 GSGRADNSMFPEVDS------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
R P S + + + L K+ G +V D+MTP P+ + +
Sbjct: 61 ---RERPVRLPLYLSFLGGIIYLEPLDHFVQQLKKSLGILVQDVMTPDPITIAPDAPISQ 117
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
AA L+LE + RLPVVD G LVGIITR +++RA
Sbjct: 118 AADLMLEKRVNRLPVVDETGALVGIITRDDLLRA 151
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 174 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
T + V DLMT PV V+ T ++E R L E LPVVD GK+VG+++ +++
Sbjct: 3 TETRQVKDLMTTDPVTVKPTDSVETVLRCLEENHISGLPVVDETGKVVGVVSEADLL 59
>gi|298529782|ref|ZP_07017185.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511218|gb|EFI35121.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 157
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 14/151 (9%)
Query: 89 MTTKEELHV-----VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS- 142
MTT E+L V P T + EA+ +L+EK I G PV+D + LVG++ DL+A+
Sbjct: 1 MTTAEDLMTSDPIRVHPETDISEAIHLLLEKNINGVPVVDQEDNLVGIICQSDLVAMQKK 60
Query: 143 --ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ +S+ P + ST K E++K+ + V D MTP PV V++ T LE+ A
Sbjct: 61 IPLPSMFTVLDSILP-LGSTAKMDREIKKIAATR----VEDAMTPEPVAVKKDTPLEELA 115
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
++++ KY LPV + GKLVG++ + +V++
Sbjct: 116 EIMVDKKYHTLPVTEG-GKLVGVVGKSDVLK 145
>gi|359457519|ref|ZP_09246082.1| CBS domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 163
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 18/155 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + PT ++++ ++++ + RI+G PV+D +VG++S+ DLL +S
Sbjct: 8 VKDFMTPDPI--TISPTDSIEKVIKLIEDHRISGMPVVDASNHVVGIISEGDLLVRES-- 63
Query: 145 GSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
M P + T +++ + + + K G +V D+MT P+ + L
Sbjct: 64 -------PMQPPLYMTLLGSVIYFESPKQFHQHMQKALGMLVQDVMTSQPITTKPDIPLT 116
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
AA L+L K RLPVVD D L+GIITR ++VRA
Sbjct: 117 SAANLMLSKKINRLPVVDNDQYLIGIITRHDLVRA 151
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+V D MTP P+ + T ++E +L+ + + +PVVDA +VGII+ G+++
Sbjct: 7 VVKDFMTPDPITISPTDSIEKVIKLIEDHRISGMPVVDASNHVVGIISEGDLL 59
>gi|327400007|ref|YP_004340846.1| CBS domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327315515|gb|AEA46131.1| CBS domain containing protein [Archaeoglobus veneficus SNP6]
Length = 260
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 35/151 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+MT + + + P TVDEA+E++ + GFPV+DD K++G +S DL
Sbjct: 5 VGDYMT--KNVITLSPDNTVDEAIELIQKTGHDGFPVVDDSGKVIGYISSRDL------- 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
L K +GD+M+ V RE +L DAAR++
Sbjct: 56 --------------------------LKKDPNTKIGDIMSKQLYVAREYMDLRDAARVMF 89
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
T + +LPVVD DG+L+GII+ +V+R+ ++
Sbjct: 90 RTGHSKLPVVDDDGRLLGIISNADVIRSQIE 120
>gi|22299345|ref|NP_682592.1| hypothetical protein tll1802 [Thermosynechococcus elongatus BP-1]
gi|22295528|dbj|BAC09354.1| CBS domain protein [Thermosynechococcus elongatus BP-1]
Length = 156
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 22/167 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + + EA+ ++ EK++ G PV+DD KLVGLVS+ DL+ ++
Sbjct: 5 VRDYMTPNP--FTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIVREA-- 60
Query: 145 GSGRADNSMFPEVDSTW-------KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ P + T+ ++ + L KT G+ V D+MTP P + +
Sbjct: 61 -------PLEPPLYITFLGSIIYFESPESFHQHLKKTLGQQVQDVMTPNPHTINVDAPIS 113
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
+AARL++ RLPV++ G+LVGII+R +++RA HA E A
Sbjct: 114 EAARLMVNHHISRLPVLNDQGELVGIISRHDLLRAL----HAQEASA 156
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN-VVRAA 233
+V D MTP P + + +A RL+ E + R LPVVD GKLVG+++ + +VR A
Sbjct: 4 LVRDYMTPNPFTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIVREA 60
>gi|158333240|ref|YP_001514412.1| hypothetical protein AM1_0009 [Acaryochloris marina MBIC11017]
gi|158339481|ref|YP_001520658.1| hypothetical protein AM1_6410 [Acaryochloris marina MBIC11017]
gi|158303481|gb|ABW25098.1| CBS domain protein [Acaryochloris marina MBIC11017]
gi|158309722|gb|ABW31339.1| CBS domain protein [Acaryochloris marina MBIC11017]
Length = 163
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + PT +++ ++++ + RI+G PV+D +VG++S+ DLL +S
Sbjct: 8 VKDFMTPDPI--TISPTDSIERVIKLIEDHRISGMPVVDASNHVVGIISEGDLLVRES-- 63
Query: 145 GSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
M P + T +++ + + + K G +V D+MT P+ + L
Sbjct: 64 -------PMQPPLYMTLLGSVIYFESPKQFHQHMQKALGMLVQDVMTSQPITTKPDIPLT 116
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
AA L+L K RLPVVD D L+GIITR ++VRA
Sbjct: 117 SAANLMLSKKINRLPVVDNDQYLIGIITRHDLVRA 151
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+V D MTP P+ + T ++E +L+ + + +PVVDA +VGII+ G+++
Sbjct: 7 VVKDFMTPDPITISPTDSIERVIKLIEDHRISGMPVVDASNHVVGIISEGDLL 59
>gi|376001640|ref|ZP_09779503.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062573|ref|ZP_17051363.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
gi|375330027|emb|CCE15256.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406715908|gb|EKD11060.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
Length = 164
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P + TV D MT V+ P + +A+ +L + RI G PV+D+ KLVG +S+ D+
Sbjct: 5 PDTMAKTVADVMTPNP--LVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDI 62
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETT 194
+ SG + +DS N +K L K G+ VGD+M+ P++ ++
Sbjct: 63 IW----QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDC 118
Query: 195 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+L +AARL+ + + RLPV+D KL+GI+T G+++R
Sbjct: 119 SLSEAARLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 155
>gi|15678671|ref|NP_275786.1| hypothetical protein MTH644 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621725|gb|AAB85149.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 157
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 86/145 (59%), Gaps = 9/145 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP-- 155
VK T+++ +A +L E RI+G PV+D+D KLVG++S+ D++ L I + N + P
Sbjct: 15 VKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMRL--IEVHSPSLNLIMPSP 72
Query: 156 ----EVDSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
E+ K ++E+ + + K V ++MTP V V ++ DAA L+ +R
Sbjct: 73 LDLLELPLRMKHEYDEIARGIRKAAVMRVEEIMTPKVVTVPPHASVSDAAELMERHDIKR 132
Query: 211 LPVVDADGKLVGIITRGNVVRAALQ 235
LPV+D +G+L GIITRG+++ A ++
Sbjct: 133 LPVIDENGRLAGIITRGDIIGAFVK 157
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
V D M + V+ T+++ DAAR+L E + PVVD DGKLVGII+ G+++R
Sbjct: 4 VKDAMQSDVITVKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMR 56
>gi|427414934|ref|ZP_18905121.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425755587|gb|EKU96452.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 173
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 18/157 (11%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD- 141
Y V D MT VKP V+ L+ L E I+G PV+DDD K+VG++S+ DLL +
Sbjct: 5 YLVKDLMTLNPV--TVKPFDLVETVLQHLEENHISGLPVVDDDGKVVGVISEADLLFRER 62
Query: 142 ------SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
++ G N + E +K + L KT G +V D+MT P+ +
Sbjct: 63 PIKLPLYLNFLG---NFFYLEPPGKFK------QQLRKTLGVLVQDVMTANPITIAPDMP 113
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ AA ++E + RLPV+D G+LVGIITR ++++A
Sbjct: 114 IATAANFMIEKRVNRLPVIDNQGQLVGIITREDLLKA 150
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 174 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
T +V DLMT PV V+ +E + L E LPVVD DGK+VG+I+ +++
Sbjct: 2 TYNYLVKDLMTLNPVTVKPFDLVETVLQHLEENHISGLPVVDDDGKVVGVISEADLLFRE 61
Query: 234 LQIK 237
IK
Sbjct: 62 RPIK 65
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 24/107 (22%)
Query: 46 FSVLATSSDRVSALRRSSAVFASGTLTAN--SAAPSSGVYTVGDFMTTKEELHVVKPTTT 103
F L LR++ V +TAN + AP + T +FM
Sbjct: 76 FFYLEPPGKFKQQLRKTLGVLVQDVMTANPITIAPDMPIATAANFM-------------- 121
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
+EKR+ PVID+ +LVG+++ DLL + AD
Sbjct: 122 --------IEKRVNRLPVIDNQGQLVGIITREDLLKALKTESAPEAD 160
>gi|209527145|ref|ZP_03275658.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
gi|209492394|gb|EDZ92736.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
Length = 157
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V+ P + +A+ +L + RI G PV+D+ KLVG +S+ D++
Sbjct: 4 TVADVMTPNP--LVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDIIW---- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAA 200
SG + +DS N +K L K G+ VGD+M+ P++ ++ +L +AA
Sbjct: 58 QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAA 117
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
RL+ + + RLPV+D KL+GI+T G+++R
Sbjct: 118 RLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 148
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+V+ L DA LL + + LPV+D GKLVG I+ +++
Sbjct: 3 KTVADVMTPNPLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
>gi|409991489|ref|ZP_11274746.1| signal transduction protein [Arthrospira platensis str. Paraca]
gi|291567536|dbj|BAI89808.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|409937646|gb|EKN79053.1| signal transduction protein [Arthrospira platensis str. Paraca]
Length = 157
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V+ P + +A+ +L + RI G PV+D+ KLVG +S+ D++
Sbjct: 4 TVADVMTPNP--LVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDIIW---- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAA 200
SG + +DS N +K L K G+ VGD+M+ P++ ++ +L +AA
Sbjct: 58 QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAA 117
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
RL+ + + RLPV+D KL+GI+T G+++R
Sbjct: 118 RLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 148
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MTP P+V+ L DA LL + + LPV+D GKLVG I+ +++
Sbjct: 3 KTVADVMTPNPLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
>gi|218779499|ref|YP_002430817.1| hypothetical protein Dalk_1651 [Desulfatibacillum alkenivorans
AK-01]
gi|218760883|gb|ACL03349.1| CBS domain containing membrane protein [Desulfatibacillum
alkenivorans AK-01]
Length = 149
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 13/154 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT E+ +KP T + EA + L+E RI G PV+D+D K+VG++ DL+ +
Sbjct: 4 VSDIMTT--EVISLKPDTDISEAAKQLLENRINGAPVVDEDGKVVGILCQSDLI----VQ 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVVRETTNLEDAA 200
S F +DS + QK K KM V MT PVVV T LED A
Sbjct: 58 QKRFPVPSFFTLLDSVIPLVS--QKHFEKEMEKMAAFKVSQAMTEKPVVVSPDTPLEDVA 115
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
L+++ K LPVVD+ GKLVG++ + +++R +
Sbjct: 116 ALMVDKKLHTLPVVDS-GKLVGVVGKEDILRTLM 148
>gi|411118891|ref|ZP_11391271.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
gi|410710754|gb|EKQ68261.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
Length = 156
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 9/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + +P T +DE ++ L KRI+G PV+++D KLVG++S+ DL+ +
Sbjct: 4 TVADVMT--RDPITARPDTPLDEVIKTLAAKRISGLPVVNEDGKLVGIISETDLMWRE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAA 200
SG +DS N + ++ L K G V D+MT VV + +L DAA
Sbjct: 60 --SGVTPPPYIMLLDSVIYLENPAKYERELHKALGSTVKDVMTDRHVVTIAPDKSLRDAA 117
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+L+ E RLPV+D + +++GI+TRG+++R
Sbjct: 118 QLMHERGVHRLPVLDKEERVIGILTRGDIIR 148
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V D+MT P+ R T L++ + L + LPVV+ DGKLVGII+ +++
Sbjct: 3 KTVADVMTRDPITARPDTPLDEVIKTLAAKRISGLPVVNEDGKLVGIISETDLM 56
>gi|357475269|ref|XP_003607920.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508975|gb|AES90117.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 110
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129
T NS ++G YTV DFMT K LHVVK TT+VDEALE LV+ RI+G PVID++W LV
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLV 108
>gi|443243845|ref|YP_007377070.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
gi|442801244|gb|AGC77049.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
Length = 153
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 26/163 (15%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
+AA + V DFMT K L P + E ++IL+++RITG PV+D + +LVG++SD
Sbjct: 12 TAANVPQKFQVKDFMTRK--LITFSPDQGITEVMDILLKQRITGGPVVDANNQLVGIISD 69
Query: 135 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
DL+ + G R N P ++V D M+ P + E
Sbjct: 70 TDLM---HVIGESRYHN--MP------------------VGNRLVSDYMSLQPATIDEEA 106
Query: 195 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
++ DAA L+T +RR PV ++GKL+G I+R +V+ AA ++K
Sbjct: 107 DIFDAAARFLKTGHRRFPVT-SEGKLIGQISRMDVIIAATKLK 148
>gi|186475859|ref|YP_001857329.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184192318|gb|ACC70283.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 230
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P TTV EA L EK I+G PV+DD +LVG+V++ DLL I G+
Sbjct: 5 DVMTTS--VVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEI-GT 61
Query: 147 GRADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + W F E+ K + V DLMT + V E T + D A L
Sbjct: 62 GVNKRAW-------WLDFLASTRELASEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAEL 114
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
L + +R+PVV DGK+ G+++R N++RA I
Sbjct: 115 LERHRIKRVPVV-KDGKVTGLVSRANLIRALASI 147
>gi|359784555|ref|ZP_09287725.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
gi|359298179|gb|EHK62397.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
Length = 229
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT K + V P V E ++L+E RI+ PV+DD+ +++G+VS+ DL+ + G
Sbjct: 5 DIMTPK--VISVGPDAEVREIAQLLLEHRISAVPVVDDERRVLGIVSEGDLMR--RVKGD 60
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R S + + + K E K++G+ ++MTP P+ V E T L ARLL +
Sbjct: 61 ERQGRSWWLSLFTGGKDPGE----YVKSHGRKAQEVMTPDPLCVEENTPLHTIARLLEKH 116
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+R+PVV +GKLVGI++R N+++
Sbjct: 117 HIKRVPVV-REGKLVGIVSRANLLQG 141
>gi|297617946|ref|YP_003703105.1| hypothetical protein Slip_1785 [Syntrophothermus lipocalidus DSM
12680]
gi|297145783|gb|ADI02540.1| CBS domain containing membrane protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 149
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA----LDS 142
D MT +E+ V+P +V+E +IL + RI+G PV+DD KLVG+V++ DL+ L+
Sbjct: 5 DIMT--KEVITVRPEQSVEEVAKILADNRISGVPVVDDAGKLVGVVTESDLMIKARDLEL 62
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
D+ +F + + + FNE L + V D+MT V E T L D ARL
Sbjct: 63 PFYITLFDSIIFLQ---SPRRFNE---ELKRFTASKVKDIMTTQVAAVDEDTPLFDIARL 116
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ R+PVV DGK+VGI+TR +VVRA
Sbjct: 117 MTAKSINRVPVV-RDGKVVGIVTRNDVVRA 145
>gi|352102837|ref|ZP_08959407.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
gi|350599688|gb|EHA15772.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
Length = 229
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 17/150 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISG 145
D MT K + V P V E +L+ RI+ PV+D + +++G+VS+ DL+ ++ G
Sbjct: 5 DIMTPK--VVSVGPDAEVSEIARLLLHHRISAVPVVDAEHRVIGIVSEGDLMRRVEDDDG 62
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
GR S W T K S K++G+ ++MTP P+ V E T L ARL
Sbjct: 63 HGR----------SWWLTLFAGGKSASDYVKSHGRKAHEVMTPNPMTVEENTPLHTIARL 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L + + +R+PVV DGKLVGI++R N+++
Sbjct: 113 LEKHRIKRVPVV-RDGKLVGIVSRANLLQG 141
>gi|187920240|ref|YP_001889271.1| hypothetical protein Bphyt_5546 [Burkholderia phytofirmans PsJN]
gi|187718678|gb|ACD19901.1| CBS domain containing membrane protein [Burkholderia phytofirmans
PsJN]
Length = 230
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +TV E +I V+ I+G PV+D D L+G++S+ DLL + I R+ S
Sbjct: 14 VHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTDERSRTSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D W +E + + KT+ V D+M+ V V+ T L + A +L + +R+PV +A
Sbjct: 71 DHLWSASHEARDYI-KTHATKVRDVMSTEVVTVQPGTPLGEVASILETRRIKRVPVTEA- 128
Query: 218 GKLVGIITRGNVVRA 232
G+LVGI++R N+V+A
Sbjct: 129 GRLVGIVSRANLVQA 143
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MT + + V + + + A++ ++ PV+DADG L+G+I+ G+++R
Sbjct: 5 DVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLR 55
>gi|443316995|ref|ZP_21046419.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
gi|442783400|gb|ELR93316.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
Length = 163
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V + EA++I+ ++RI+G PVI + LVG++S+ DL+
Sbjct: 4 TVADVMT--RDPITVGSNALLQEAIQIMADQRISGLPVISAEGSLVGILSETDLMW--QA 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE-TTNLEDAARL 202
+G+ M + K + L K G+ V ++M+ PVV + +L AA+L
Sbjct: 60 TGAPLPAYVMLLDSVIYLKNPTRFNQELHKALGQTVAEVMSDHPVVTTQPEASLRAAAQL 119
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVR 231
+ + + RRLPV+D G LVGI+TRG++VR
Sbjct: 120 MHDKQVRRLPVLDDSGSLVGILTRGDIVR 148
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+ V D+MT P+ V L++A +++ + + LPV+ A+G LVGI++ +++ A
Sbjct: 3 RTVADVMTRDPITVGSNALLQEAIQIMADQRISGLPVISAEGSLVGILSETDLMWQA 59
>gi|52632000|gb|AAU85400.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 166
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 21/168 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MTT ++ KP + ++ RI+G PVIDD K++G++S+ D++ L +
Sbjct: 9 VKELMTT--DVIAFKPGEKIPHVVKAFRTNRISGAPVIDDQRKVIGIISEADIMKLTA-- 64
Query: 145 GSGRADNSMFPEVD-----------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
FP++D S K ++ + V D+MT V +
Sbjct: 65 ------TVPFPDIDPLNPFPVFSLSSYMKKVKKIPDEIETLFEGYVKDVMTKKTVTISPD 118
Query: 194 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
++ DAARL+ + ++R+PVVD +GKLVG+I RG+V+ + H+ +
Sbjct: 119 NSISDAARLMHKNDFKRIPVVDDEGKLVGVIARGDVIGVFAKYSHSKK 166
>gi|163754304|ref|ZP_02161426.1| CBS domain protein, putative [Kordia algicida OT-1]
gi|161325245|gb|EDP96572.1| CBS domain protein, putative [Kordia algicida OT-1]
Length = 156
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 27/167 (16%)
Query: 71 LTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130
+ ANS + + V D+MT L KP TV+E ++ L++ +I+G PV++D +L+G
Sbjct: 12 VQANSTNKAEA-FKVSDYMT--RNLITFKPEQTVEEVIQKLIQHKISGGPVVNDQNELIG 68
Query: 131 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
++S+ D + IS S R N F N+++ ++K + GDL
Sbjct: 69 IISEGD--CIKQISDS-RYYNMPFEH--------NKIEAHMAKNVETIDGDL-------- 109
Query: 191 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
N+ DAA +ETK RR P+V+ +GKLVG I++ ++++AA+++K
Sbjct: 110 ----NIFDAANKFIETKRRRFPIVE-NGKLVGQISQKDILKAAMKLK 151
>gi|427722542|ref|YP_007069819.1| putative signal transduction protein [Leptolyngbya sp. PCC 7376]
gi|427354262|gb|AFY36985.1| putative signal transduction protein with CBS domains [Leptolyngbya
sp. PCC 7376]
Length = 155
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 90/156 (57%), Gaps = 9/156 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT VVK T + EA+++LV+++++G PV+D + KLVG++S+ DL +
Sbjct: 5 TVAEIMTADPV--VVKKDTPLAEAIQLLVDRKVSGLPVVDQEMKLVGIISEGDL----TW 58
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N + K + K G+ VG++M+ V + + +AA
Sbjct: 59 QETGVDTPPYIMLLDSVIYLQNPAKHDKEIHKALGQTVGEVMSDKVVTIAPNKMVREAAH 118
Query: 202 LLLETKYRRLPVVDAD-GKLVGIITRGNVVRAALQI 236
L+ E K RLPV+ +D K++GIIT+G+++RA Q+
Sbjct: 119 LMHEKKVGRLPVLASDSNKVLGIITQGDIIRAMAQV 154
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
K V ++MT PVVV++ T L +A +LL++ K LPVVD + KLVGII+ G++
Sbjct: 4 KTVAEIMTADPVVVKKDTPLAEAIQLLVDRKVSGLPVVDQEMKLVGIISEGDL 56
>gi|332711630|ref|ZP_08431561.1| putative signal-transduction protein [Moorea producens 3L]
gi|332349608|gb|EGJ29217.1| putative signal-transduction protein [Moorea producens 3L]
Length = 155
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT + VV+P T + E ++I+ E+ I+G PV+++ KLVG++S+ DLL ++
Sbjct: 4 TVAEVMT--RDPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLLWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G MF +DS N + + L K G+ G++MT P+ ++ L AA+
Sbjct: 61 -GVEPPVYIMF--LDSVIYLENPARYDQELHKALGQTAGEVMTGHPMSIKPDQPLRKAAK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ E LPV D +++GI++ G++VRA
Sbjct: 118 LMQEKSIHHLPVTDEAEQVIGILSSGDIVRA 148
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K V ++MT P+VV+ T +++ +++ E LPVV+ GKLVG+I+ +++
Sbjct: 2 AKTVAEVMTRDPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLL 56
>gi|424894152|ref|ZP_18317729.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393183179|gb|EJC83217.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 223
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 15/150 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + V P +V +A +++ +++++G PV+DDD +L+GL+S+ DL+ +S
Sbjct: 3 VKDVMTTT--IVTVSPDNSVRQAAKLMADRQVSGIPVVDDDGRLIGLISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+A+ + P +E K VGD+MTP PV + E L A
Sbjct: 61 SGAFLLKAEMGLGP---------DERANAFVKRCAWRVGDVMTPNPVTIFEDAPLSRVAG 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
L+ E +R+PV+ A GKLVGI++R ++++
Sbjct: 112 LMQEHGIKRIPVLRA-GKLVGIVSRADLLQ 140
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V V ++ AA+L+ + + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTTIVTVSPDNSVRQAAKLMADRQVSGIPVVDDDGRLIGLISEGDLIR 55
>gi|225174422|ref|ZP_03728421.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225170207|gb|EEG79002.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 148
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS--- 159
T+++ ILVE RI+G PV+D + ++VG+V++ DL+ D + F E+
Sbjct: 19 TINDVAAILVEHRISGVPVVDKEQRVVGMVTEGDLIHQDK-----KLHTPAFLEILGGVI 73
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ V K L K V ++MT V+E T +ED A +++E + R+PVVDA GK
Sbjct: 74 YLENPQRVAKDLEKMTATKVVEIMTRKVFTVKEDTPIEDIATMMVERQVNRVPVVDAAGK 133
Query: 220 LVGIITRGNVVRA 232
L GI++R ++V+A
Sbjct: 134 LTGIVSRQDLVKA 146
>gi|217076999|ref|YP_002334715.1| hypothetical protein THA_915 [Thermosipho africanus TCF52B]
gi|419759571|ref|ZP_14285865.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
gi|217036852|gb|ACJ75374.1| CBS domain containing membrane protein [Thermosipho africanus
TCF52B]
gi|407515391|gb|EKF50149.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
Length = 147
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMFPEVDST 160
+V L+IL +++TG PVID+D+K+VG +S+ D++ AL S S S P+
Sbjct: 19 SVSRVLKILSRQQVTGVPVIDEDYKVVGFISENDIIRAALPS-YFSLLQTASFIPD---- 73
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
N+ + L K + + V ++MT + ++E+T L AA L++ + LPVVD D KL
Sbjct: 74 ---LNQFVRNLKKISNRAVSEIMTKPAITIKESTPLLHAADLMIRHSLKILPVVDEDDKL 130
Query: 221 VGIITRGNVVRA 232
+G+ITR ++ A
Sbjct: 131 LGVITRMKILEA 142
>gi|268324813|emb|CBH38401.1| conserved hypothetical protein containing CBS domain pair
[uncultured archaeon]
Length = 160
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
V V + MTT ++ KP+ V + E RI+G PVIDD K++G++S+ D++ L
Sbjct: 6 VVKVRELMTT--DVIAFKPSDKVHQVAETFRSNRISGAPVIDDQRKVIGVISEADIMKLT 63
Query: 142 SISGSGRADNSMFPEVD--STWKTFN------EVQKLLSKTNGKMVG---DLMTPAPVVV 190
+ FP++D + + F+ +V+K+ + G D+MT PV +
Sbjct: 64 A--------TVPFPDIDPLNPFPVFSLTAYRKKVEKIPDEIETLFEGSVKDVMTKDPVTI 115
Query: 191 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++ DAARL+ + + R+PVVD +GKLVG+I R +++ +Q
Sbjct: 116 SPDDSILDAARLMHKGDFNRIPVVDDEGKLVGLIARADIIGLFVQ 160
>gi|218678132|ref|ZP_03526029.1| signal-transduction protein [Rhizobium etli CIAT 894]
Length = 201
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 15/156 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + + P +V A +++ +++++G PV+DDD +L+G++S+ DL+ +S
Sbjct: 3 VKDVMTTT--VVTLSPDNSVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+AD + P +E K VGD+MTP P+ + E L A
Sbjct: 61 SGAFVLKADMELGP---------DERANAFVKRCAWRVGDVMTPDPLTIDEDAALSHVAE 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
L+ E +R+PV+ DGKLVGI++R ++++ K
Sbjct: 112 LMQERGIKRIPVL-RDGKLVGIVSRADLLQVIYSAK 146
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR------ 231
+V D+MT V + ++ AA+L+ + + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTTVVTLSPDNSVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIRRTELSS 61
Query: 232 AALQIKHATEMG 243
A +K E+G
Sbjct: 62 GAFVLKADMELG 73
>gi|147678859|ref|YP_001213074.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274956|dbj|BAF60705.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
Length = 159
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 22/156 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT ++++ +K T V + L + K+ITG PV+D+ +LVG+++ D+L
Sbjct: 2 TVKDLMT--KDVYTIKDTDKVIDLLRLFERKKITGAPVVDNCNRLVGIITVGDIL----- 54
Query: 144 SGSGRA-------DNSMFPEVDSTWKTFN-EVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
GR D + V T N E+ +L GK+V +LMT + V E T
Sbjct: 55 ---GRIYKPVPLFDIMYYVAVLDTDAIVNGEIYDVL----GKLVSELMTRKVITVSEDTE 107
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D A+++ ++++LPVVD+ KL+G+I+RG +VR
Sbjct: 108 FADVAKIMSRHRFKKLPVVDSSNKLIGVISRGEIVR 143
>gi|220925988|ref|YP_002501290.1| hypothetical protein Mnod_6174 [Methylobacterium nodulans ORS 2060]
gi|219950595|gb|ACL60987.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 246
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 26/155 (16%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT EE+ V+ ++ A+ +++EKRI+G PV+D D ++G+V++ DLLA
Sbjct: 5 DIMT--EEVTGVRADLPLELAVALMLEKRISGLPVLDPDGAVIGIVTEGDLLA------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLE 197
PE+ + N VQ L+S + G+ VGD+MT V T L+
Sbjct: 56 -------RPELGTARPKPNWVQYLISPGRLAEAYARERGRQVGDVMTKEVVTASPDTPLD 108
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ L+ + +R+PVVD G+++GI+TR +++RA
Sbjct: 109 EIVDLMARRRIKRVPVVD-KGRMIGIVTRADLLRA 142
>gi|359393632|ref|ZP_09186685.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
gi|357970879|gb|EHJ93324.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
Length = 229
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 21/152 (13%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D MT K + V P V E ++L+ RI+ PV+DDD +++G+VS+ DL+ DS
Sbjct: 5 DIMTPK--VVSVGPGAEVREIAQLLLNHRISAVPVVDDDHRVIGIVSEGDLMRRVKNDSD 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAA 200
GS S W + K K++G+ ++MTP P+ V E T L A
Sbjct: 63 HGS------------SWWLSLFTGGKDAGDYVKSHGRKAHEVMTPNPMTVEENTPLHTIA 110
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
R+L + +R+PV+ DGKLVGI++R N+++
Sbjct: 111 RMLEKHHIKRVPVL-RDGKLVGIVSRANLLQG 141
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MTP V V + + A+LLL + +PVVD D +++GI++ G+++R ++K+ +
Sbjct: 5 DIMTPKVVSVGPGAEVREIAQLLLNHRISAVPVVDDDHRVIGIVSEGDLMR---RVKNDS 61
Query: 241 EMGA 244
+ G+
Sbjct: 62 DHGS 65
>gi|148656616|ref|YP_001276821.1| hypothetical protein RoseRS_2494 [Roseiflexus sp. RS-1]
gi|148568726|gb|ABQ90871.1| CBS domain containing protein [Roseiflexus sp. RS-1]
Length = 427
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 91/159 (57%), Gaps = 9/159 (5%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T+ + P TV D MT ++ V+P T V E + +L+++ + PV+D + +++G+
Sbjct: 108 TSRAIGPFPAHLTVADVMT--RQVVSVRPDTPVAEIVALLIDRALRSAPVVDAENRVIGI 165
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
++D DLL G+ ++ E+ S + ++ L T+ DLMTP PV +R
Sbjct: 166 ITDGDLLT----RGATELPLALQREL-SLAERAATIETL--ATHRHTAADLMTPNPVTLR 218
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
ETT L +AA ++ + +R+PVVDA +LVG+++R +++
Sbjct: 219 ETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLL 257
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P TVG+ M T ++ V+P T + E L+ L+E V+D + ++VG+++D D+
Sbjct: 275 PDGAPKTVGEIMIT--DVPTVQPDTPLAETLDRLLETDKRRVIVVDGERRVVGIITDGDV 332
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ + R + + + L G+ D+MT V + +
Sbjct: 333 MR----RAAKRVRPGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPTNAPIA 388
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
DA RL++ K +R+P++DADG+LVG++ R V+ A
Sbjct: 389 DAVRLMMAHKIKRIPIIDADGRLVGMVGRAGVLAA 423
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+T D MT ++ TT + EA ++ ++ + PV+D +LVG+VS DLLA +
Sbjct: 204 HTAADLMTPNPV--TLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLLATVA 261
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + + + D KT E+ M+ D+ T V+ T L +
Sbjct: 262 -EGLRQRPATPIRQPDGAPKTVGEI----------MITDVPT-----VQPDTPLAETLDR 305
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
LLET RR+ VVD + ++VGIIT G+V+R A
Sbjct: 306 LLETDKRRVIVVDGERRVVGIITDGDVMRRA 336
>gi|218885382|ref|YP_002434703.1| hypothetical protein DvMF_0278 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756336|gb|ACL07235.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 150
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN--SMFP 155
V P T + EA I+++++ G PV+D LVG++ DL+A + N ++F
Sbjct: 15 VTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLIA------QHKKLNLPTLFT 68
Query: 156 EVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+D ++ +++ + + K + VG MTP PV V T +++ A L++++KY LPV
Sbjct: 69 VLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEVASLMVDSKYHTLPV 128
Query: 214 VDADGKLVGIITRGNVVR 231
VDA G LVG+I + +V+R
Sbjct: 129 VDA-GSLVGVIGKEDVLR 145
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
D+MT APV V T + +AAR++++ K+ LPVVD G LVG+I + +++
Sbjct: 6 DIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLI 55
>gi|378825222|ref|YP_005187954.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
gi|365178274|emb|CCE95129.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
Length = 222
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 17/145 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-----LALDSISGSGRADNS 152
V P +V +A +++E ++G PV+DD+ LVG++S+ DL L + +I + A+ +
Sbjct: 14 VSPDNSVRQAANVMLENHVSGIPVVDDEGHLVGIISEGDLIRRTELGIGAI--ASLAEMA 71
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
M E E K + VGD MT APV + E +L A+L+LE +R+P
Sbjct: 72 MPAE---------ERAGAYVKRSSWKVGDAMTSAPVTIDEDASLTQVAKLMLERGIKRIP 122
Query: 213 VVDADGKLVGIITRGNVVRAALQIK 237
V A G+LVGI++R +++RA L K
Sbjct: 123 VTRA-GELVGIVSRADLLRAILIAK 146
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT A V V ++ AA ++LE +PVVD +G LVGII+ G+++R
Sbjct: 2 LVKDVMTIAIVKVSPDNSVRQAANVMLENHVSGIPVVDDEGHLVGIISEGDLIR 55
>gi|186470615|ref|YP_001861933.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184196924|gb|ACC74887.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 231
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
+P TV EA + LV+ RI+G PV+D LVG+VS+ DL L + S + EV
Sbjct: 15 QPDMTVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDL--LHRVETGTETRRSRWLEVF 72
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
S T ++ K +G+ V D+MT + + V + D A L+ + +R+PV+ G
Sbjct: 73 S---TTRDLASTFVKEHGRSVADVMTASVLTVDWQMPVADIADLMERRRIKRVPVMRG-G 128
Query: 219 KLVGIITRGNVVRA 232
KL+GI+TRGN++RA
Sbjct: 129 KLIGIVTRGNLIRA 142
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MTP+ + + +++AA+ L++ + +PVVDA G LVG+++ G+++ H
Sbjct: 5 DVMTPSVICAQPDMTVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDLL-------HRV 57
Query: 241 EMGAQ 245
E G +
Sbjct: 58 ETGTE 62
>gi|116749632|ref|YP_846319.1| hypothetical protein Sfum_2202 [Syntrophobacter fumaroxidans MPOB]
gi|116698696|gb|ABK17884.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 152
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ V P T + +A ++L++K I G PVIDD LVG++ DL+A
Sbjct: 4 VADIMT--RDVISVSPQTEIVQAAKLLLDKHINGLPVIDDRGNLVGILCQSDLIAQQKRF 61
Query: 145 GSGRADNSM--FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
N + F + S + EVQK+ + T VG+ MT PV V T +E+ ARL
Sbjct: 62 PLPSVFNLLDSFIPLTSPSRFEKEVQKISAVT----VGEAMTREPVTVSPDTTIEEVARL 117
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
++ LPVVD + KL+GII + +V+R L
Sbjct: 118 MVNKNLHTLPVVDGN-KLIGIIGKEDVLRTLL 148
>gi|94266307|ref|ZP_01290010.1| CBS [delta proteobacterium MLMS-1]
gi|93453098|gb|EAT03574.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 15/140 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP V+E +L EKRI+G PV+DDD KLVG+ ++ DL+ +A P
Sbjct: 15 VKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI--------DQAKKFHIPTA 66
Query: 158 DSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + +V+K +SK G V D+ T PV V T L++ A ++ E L
Sbjct: 67 ITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEKHLHTL 126
Query: 212 PVVDADGKLVGIITRGNVVR 231
PV++ DG+LVG+I + +++R
Sbjct: 127 PVLE-DGQLVGVIGKADIIR 145
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++MT V V+ +E+ A LL E + +PVVD DGKLVG+ T +++ A
Sbjct: 6 EIMTREVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLIDQA 58
>gi|304314784|ref|YP_003849931.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588243|gb|ADL58618.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 156
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T E+ VK + + +A IL E RI+G PV+DD+ KLVG++S+ D++ L I
Sbjct: 4 VKDAMQT--EVITVKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMRL--IE 59
Query: 145 GSGRADNSMFP------EVDSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ N + P E+ K ++E+ K + K V ++MT V V ++
Sbjct: 60 VHSPSLNLLMPSPLDLLELPVRMKHEYDEIAKGIRKAAMMRVEEIMTDRVVTVHPDASVS 119
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
DAA L+ +RLPVV+ D +LVGIITRG+++ A ++
Sbjct: 120 DAAELMDRHDIKRLPVVE-DDELVGIITRGDIIGAFVK 156
>gi|402848240|ref|ZP_10896505.1| putative CBS domain protein [Rhodovulum sp. PH10]
gi|402501566|gb|EJW13213.1| putative CBS domain protein [Rhodovulum sp. PH10]
Length = 180
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 87/151 (57%), Gaps = 15/151 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM+ + P + EA ++++E R++G PV+D +LVG+VS++DLL S +
Sbjct: 3 VRDFMSHPAV--AIAPDRPIAEAAQLMLEHRVSGLPVVDATGRLVGIVSEHDLLRRRS-N 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G+ R + + + E Q L + + VGD+MT V V + T+LE+A R
Sbjct: 60 GATRRPHWL--------QLMTEGQALAQEPERFHALTVGDVMTTEVVAVSDDTSLEEAGR 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ +RLPV+ DG+++G+++R +++RA
Sbjct: 112 LIEVHGIKRLPVI-RDGRVIGVLSRADLLRA 141
>gi|303284687|ref|XP_003061634.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456964|gb|EEH54264.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 256
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG+ MT + + + + V +ALE+LV R +G PV+DDD ++VG++S+YDL+
Sbjct: 91 VGNVMTPRANVSCARASDNVLDALEVLVSNRHSGVPVLDDDERVVGVISEYDLMVRIGRE 150
Query: 145 GSGRA--DNSMFPE----------VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
G ++ D+ MFP+ V W F ++Q + K V + M A E
Sbjct: 151 GKKQSEKDDGMFPKIGRCDEFGGAVKDMWSRFIDLQDRMEKAQVTTVREAMHDAMTCTPE 210
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
T L DA +L + R+ VVD D K+ I+
Sbjct: 211 TL-LVDATDAMLNERRHRICVVDEDDKVRSIL 241
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV--VRETTNLEDAARLLLETKYRRLPVV 214
V TW ++L ++ ++VG++MTP V R + N+ DA +L+ ++ +PV+
Sbjct: 75 VAETW------EELEAEVANEVVGNVMTPRANVSCARASDNVLDALEVLVSNRHSGVPVL 128
Query: 215 DADGKLVGIITRGN-VVRAALQIKHATE 241
D D ++VG+I+ + +VR + K +E
Sbjct: 129 DDDERVVGVISEYDLMVRIGREGKKQSE 156
>gi|94270649|ref|ZP_01291791.1| CBS [delta proteobacterium MLMS-1]
gi|93450722|gb|EAT01796.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 15/140 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP V+E +L EKRI+G PV+DDD KLVG+ ++ DL+ +A P
Sbjct: 15 VKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI--------DQAKKFHIPTA 66
Query: 158 DSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + +V+K +SK G V D+ T PV V T L++ A ++ E L
Sbjct: 67 ITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEKHLHTL 126
Query: 212 PVVDADGKLVGIITRGNVVR 231
PV++ DG+LVG+I + +++R
Sbjct: 127 PVLE-DGQLVGVIGKADIIR 145
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++MT V V+ +E+ A LL E + +PVVD DGKLVG+ T +++ A
Sbjct: 6 EIMTREVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLIDQA 58
>gi|307726495|ref|YP_003909708.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307587020|gb|ADN60417.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 229
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ E + VEKRI+G PV+D D +VG++S+ DLL I R S
Sbjct: 14 VTPDMTIREVARLFVEKRISGAPVLDPDGSVVGMISEGDLLRRSEIGTDERRRVSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W +E + + KT+G V D+MT + V T L + A +L +R+PV +A
Sbjct: 71 -DFWSASHEARDYV-KTHGTKVSDVMTTDVITVEPDTLLGEVAAILETRGIKRVPVTEA- 127
Query: 218 GKLVGIITRGNVVRA 232
G+LVGI++R N+V+A
Sbjct: 128 GRLVGIVSRANLVQA 142
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MT + V + + ARL +E + PV+D DG +VG+I+ G+++R
Sbjct: 5 DVMTGNVISVTPDMTIREVARLFVEKRISGAPVLDPDGSVVGMISEGDLLR 55
>gi|374576817|ref|ZP_09649913.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374425138|gb|EHR04671.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 242
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+D KL+G+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDGAGKLIGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K+ N+ +G+ V ++MTP+PV + E T L + L+ +RLPV+ D
Sbjct: 73 LGSGKSAND----FIHEHGRKVSEVMTPSPVTISEDTALAEIVDLMERNNVKRLPVIHGD 128
Query: 218 GKLVGIITRGNVVRA 232
K+VGI++R N+++A
Sbjct: 129 -KIVGIVSRANLLQA 142
>gi|256811333|ref|YP_003128702.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256794533|gb|ACV25202.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 154
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV +++ ++I E +I+G PV++ D KLVG++S+ D++ +I N + P
Sbjct: 12 VVYEDDDLEDVIKIFRENKISGAPVLNKDGKLVGIISESDIIK--TIVTHDEDLNLILPS 69
Query: 157 ----VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
++ KT E + L K V D+MT +V + + DAA+L++E +
Sbjct: 70 PLDLIELPLKTALKIEEFMEDLKKALKTKVKDMMTKKVIVAKPDMTVNDAAKLMVEHNIK 129
Query: 210 RLPVVDADGKLVGIITRGNVVRAAL 234
RLPVVD +G L+GI+TRG+++ A +
Sbjct: 130 RLPVVDDEGNLIGIVTRGDLIEALI 154
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
++ D+M P+VV E +LED ++ E K PV++ DGKLVGII+ ++++
Sbjct: 2 LIKDVMK-KPIVVYEDDDLEDVIKIFRENKISGAPVLNKDGKLVGIISESDIIK 54
>gi|410460188|ref|ZP_11313871.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
gi|409927418|gb|EKN64554.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
Length = 181
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 33/167 (19%)
Query: 76 AAPSSG---VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A P+S + V DFM TK + VKP++T+ E L+IL RI G PV+DD LVG+V
Sbjct: 23 AIPTSKEGIIMKVRDFMITK--VFTVKPSSTIKELLDILNSNRIGGVPVVDDKGHLVGMV 80
Query: 133 SDYDLL-----------ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
SD D+L L I G +N + ++D++ V+++++K N
Sbjct: 81 SDGDVLRYLSPKRLGFAGLIYIIEDGELENVLHEKLDTS------VKEIMTKRN------ 128
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+++ +P E RLL Y++LPVV+ G+++G+++RG+
Sbjct: 129 ILSVSP-----EDEFEMTMRLLSIHNYKKLPVVNRAGRVIGVLSRGD 170
>gi|27379749|ref|NP_771278.1| hypothetical protein blr4638 [Bradyrhizobium japonicum USDA 110]
gi|27352902|dbj|BAC49903.1| blr4638 [Bradyrhizobium japonicum USDA 110]
Length = 240
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT++EA +I++ I+G PVIDD LVG+VS+ D L I G+GR
Sbjct: 14 VTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLRRSEI-GTGRK-------- 64
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W F +G+ V D+MT V RE T+L D L+ + +R+PV
Sbjct: 65 HAAWLKFFMGPRRAAAEFVHESGRKVEDVMTRQVVSAREETSLVDVVDLMEKHDIKRVPV 124
Query: 214 VDADGKLVGIITRGNVVRAALQIKH 238
+ + +GI+TR N+++A + H
Sbjct: 125 MRGEAT-IGIVTRSNLLQAMASLAH 148
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT V V T +E+AA+++L LPV+D G LVGI++ + +R
Sbjct: 6 VMTRDVVAVTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLR 55
>gi|398356193|ref|YP_006529520.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
gi|399995408|ref|YP_006575646.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|365182255|emb|CCE99105.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|390131440|gb|AFL54820.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
Length = 226
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 20/149 (13%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT + + + P +V A +++E I+G PV+DD+ LVG++++ DLL
Sbjct: 5 DIMTRR--VIAISPEHSVKHAACVMLENHISGLPVLDDNESLVGILTEGDLLR------- 55
Query: 147 GRADNSMFPEVDSTWK----TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
RA+ + P + W+ T E ++ K N VGD+MTP V V E T ++ A
Sbjct: 56 -RAE--LGP---AAWRGTGSTHEEAPEIFIKGNSWRVGDVMTPGVVTVDEDTPVDRIAAA 109
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVR 231
+ +R+PVV A G++VGI++RG+++R
Sbjct: 110 MKTHDIKRVPVVRA-GQMVGIVSRGDILR 137
>gi|359791626|ref|ZP_09294471.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359252271|gb|EHK55537.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 220
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V A I+++ RI+G PVIDDD ++VG+V++ DL+ + ++ P V
Sbjct: 14 VSPDHSVRHAARIMLDHRISGLPVIDDDGRVVGIVTEGDLMRRSELGA-----QALAP-V 67
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D + T K++ V D+MT PV V E T L A L+ E +R+PV+
Sbjct: 68 DRQFSTEENNAGAYVKSHSWKVADVMTEDPVKVEEETPLPRIAALMAERGIKRVPVMRG- 126
Query: 218 GKLVGIITRGNVVRAALQIK 237
G LVGI++R ++R + K
Sbjct: 127 GHLVGIVSRAELLRVLITAK 146
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MT V V ++ AAR++L+ + LPV+D DG++VGI+T G+++R +
Sbjct: 5 DVMTVDVVSVSPDHSVRHAARIMLDHRISGLPVIDDDGRVVGIVTEGDLMR-------RS 57
Query: 241 EMGAQ 245
E+GAQ
Sbjct: 58 ELGAQ 62
>gi|347730925|ref|ZP_08864035.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347520431|gb|EGY27566.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 150
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 11/138 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN--SMFP 155
V P T + EA I+++++ G PV+D LVG++ DL+A + N ++F
Sbjct: 15 VTPETGIAEAARIMIQRKFNGLPVVDAKGALVGVICQSDLIA------QHKKLNLPTLFT 68
Query: 156 EVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+D ++ +++ + + K + VG MTP PV V T +++ A L++++KY LPV
Sbjct: 69 VLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEVASLMVDSKYHTLPV 128
Query: 214 VDADGKLVGIITRGNVVR 231
VD G LVG+I + +V+R
Sbjct: 129 VDG-GTLVGVIGKEDVLR 145
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
D+MT APV V T + +AAR++++ K+ LPVVDA G LVG+I + +++
Sbjct: 6 DIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDAKGALVGVICQSDLI 55
>gi|427714431|ref|YP_007063055.1| hypothetical protein Syn6312_3486 [Synechococcus sp. PCC 6312]
gi|427378560|gb|AFY62512.1| CBS domain-containing protein [Synechococcus sp. PCC 6312]
Length = 152
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 18/155 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTT H V PT +++ A++++ E+++ G PV+D+ KLVGL+++ DL+ ++
Sbjct: 6 VQDYMTTNP--HTVSPTDSIETAIKLMEERQVRGLPVVDEAGKLVGLITEADLIVREA-- 61
Query: 145 GSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ P V T +++ + L KT G V D MT PV TT +
Sbjct: 62 -------PLEPPVYLTLLGSVIYFESPEKFHHHLKKTLGMQVQDAMTTDPVTTTPTTPIS 114
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ A+ ++ RLPV+D G LVGIITR ++++A
Sbjct: 115 EVAQAIVHHHISRLPVLDETGGLVGIITRHDLMQA 149
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN-VVRAA 233
+V D MT P V T ++E A +L+ E + R LPVVD GKLVG+IT + +VR A
Sbjct: 5 VVQDYMTTNPHTVSPTDSIETAIKLMEERQVRGLPVVDEAGKLVGLITEADLIVREA 61
>gi|440746999|ref|ZP_20926260.1| CBS domain protein [Mariniradius saccharolyticus AK6]
gi|436484628|gb|ELP40604.1| CBS domain protein [Mariniradius saccharolyticus AK6]
Length = 152
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 30/167 (17%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
N P S V D MTT L +P T+D+ L L K+I+G PV+D KLVG++S
Sbjct: 15 NQTQPIS----VRDHMTT--NLITFRPDDTIDKVLVTLASKKISGAPVLDHSGKLVGIIS 68
Query: 134 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
+ D L S+ G+ N+ K + KM D+MT +P +
Sbjct: 69 EVDCL---SVVIKGQYTNT---------------PKFSALVEEKMTKDVMTLSPDI---- 106
Query: 194 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
+ DAA+L LE K RR PVV DGKL+G I+ +++R ++K T
Sbjct: 107 -TIFDAAQLFLEHKIRRFPVV-KDGKLLGQISLSDIIRVFTKLKTTT 151
>gi|337284850|ref|YP_004624324.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
gi|334900784|gb|AEH25052.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
Length = 486
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 34/138 (24%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ +KP TV+ AL ++ + I G PV+DDD +VG+VS D+ + D
Sbjct: 101 EDIITIKPEETVEYALFLMEKNDIDGLPVVDDDGMVVGIVSKKDIASRD----------- 149
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E+ +E+A R+++E + RLP
Sbjct: 150 -----------------------GKLVKELMTRDVITVPESVEVEEALRIMVENRIDRLP 186
Query: 213 VVDADGKLVGIITRGNVV 230
VVD +GKLVG+IT ++V
Sbjct: 187 VVDREGKLVGLITMSDLV 204
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
V + V+EAL I+VE RI PV+D + KLVGL++ DL+A + R +N
Sbjct: 164 VPESVEVEEALRIMVENRIDRLPVVDREGKLVGLITMSDLVARKKYKNAVRNENG 218
>gi|390953892|ref|YP_006417650.1| putative contains C-terminal CBS domains [Aequorivita sublithincola
DSM 14238]
gi|390419878|gb|AFL80635.1| putative transcriptional regulator, contains C-terminal CBS domains
[Aequorivita sublithincola DSM 14238]
Length = 153
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 26/168 (15%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A + SS V D+MT L +P ++ E +E+L++KRI+G PV+++ +LVG++
Sbjct: 11 AKTQKGSSEKIKVSDYMT--RNLITFRPEQSIMEVMEVLLKKRISGGPVVNEKNELVGII 68
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
S+ D + S S R N +V K + K + +G+M
Sbjct: 69 SEGDCMKQLSDS---RYHNHPMEDV----KVEQHMIKNVDTIDGEM-------------- 107
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
N+ DAA + +E+K+RR P+++ +GKL G I++ +V+RAA+++K T
Sbjct: 108 --NVLDAANMFVESKHRRFPILE-NGKLAGQISQSDVLRAAMELKGQT 152
>gi|297583021|ref|YP_003698801.1| CBS domain-containing membrane protein [Bacillus selenitireducens
MLS10]
gi|297141478|gb|ADH98235.1| CBS domain containing membrane protein [Bacillus selenitireducens
MLS10]
Length = 154
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 24/162 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V D MT +E +KP T+V++ ++L++ +G PV+DD+ L G+VS+ D++
Sbjct: 3 SVKDVMT--KEAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIK---- 56
Query: 144 SGSGRADNSMFPEV----------DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
RA + P V DS K E+++ +S T +GDLM +
Sbjct: 57 ----RASHIQSPAVLEFLGGLIYLDSPKKYMEELKQAMSLT----IGDLMKTEVITAHPD 108
Query: 194 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++E A +L +R PVVD +GK++GII+R ++++ Q
Sbjct: 109 DSIEQIATKMLSKNIKRFPVVDEEGKVIGIISRRDIMKHLYQ 150
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
V D+MT V ++ T++ED A+LLL+ + +PVVD +G L G+++ G++++ A I+
Sbjct: 4 VKDVMTKEAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIKRASHIQ 62
>gi|431799366|ref|YP_007226270.1| hypothetical protein Echvi_4053 [Echinicola vietnamensis DSM 17526]
gi|430790131|gb|AGA80260.1| putative transcriptional regulator, contains C-terminal CBS domains
[Echinicola vietnamensis DSM 17526]
Length = 153
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 26/173 (15%)
Query: 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
G A +S V + MTT L P T+D +++L +KRI+G PV+DD
Sbjct: 6 QGVRMAEPQTRASQPILVSNHMTTN--LTTFHPDDTIDHVVQVLTQKRISGAPVLDDGQN 63
Query: 128 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 187
LVG++S+ D L + I G +N ++ + M D++T P
Sbjct: 64 LVGIISEVDCLK-EIIRGK-----------------YNNTPRMAGRVREHMTKDVVTMDP 105
Query: 188 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
V + DAA LE K RR PV+ DGKL+G I+ +++RA ++K T
Sbjct: 106 EV-----TIFDAAHRFLELKIRRFPVL-KDGKLLGQISLSDIIRAMPRLKSET 152
>gi|333986774|ref|YP_004519381.1| CBS domain-containing membrane protein [Methanobacterium sp.
SWAN-1]
gi|333824918|gb|AEG17580.1| CBS domain containing membrane protein [Methanobacterium sp.
SWAN-1]
Length = 159
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 9/144 (6%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP--- 155
K T + + + L + +I+G P++DDD K++G+VS+ D++ L + N + P
Sbjct: 16 KSTDKIIDVAQSLRDNKISGAPIVDDDGKVIGIVSEGDIMRLIEVHSPQM--NLILPSPL 73
Query: 156 ---EVDSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
E+ K ++E+ K L ++G++MT V V ++ D A L+ +RL
Sbjct: 74 DWIELPLRMKHEYDEITKGLKTAAKVLIGEIMTKKVVSVLPDASISDGAALMDSHDIKRL 133
Query: 212 PVVDADGKLVGIITRGNVVRAALQ 235
PVVDAD KLVGI+TRG+++ A ++
Sbjct: 134 PVVDADKKLVGIVTRGDIIGAMVR 157
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+ D M + + T + D A+ L + K P+VD DGK++GI++ G+++R
Sbjct: 4 IQDAMEKNVIKFKSTDKIIDVAQSLRDNKISGAPIVDDDGKVIGIVSEGDIMR 56
>gi|386828147|ref|ZP_10115254.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
gi|386429031|gb|EIJ42859.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
Length = 142
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 85/153 (55%), Gaps = 20/153 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + M+ + L+ +KPT TV +A +++++K I P++D+ +GL++ +D+LAL
Sbjct: 3 TVKELMSHR--LYTLKPTDTVHQARQLMLDKHIRHIPIVDNHGTFLGLITKHDILAL--- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S S AD E Q+ + +G + +M VV +E+TNL +AAR +
Sbjct: 58 SVSELAD--------------IEPQERIEIESGIPLSQVMLTEVVVAQESTNLLEAARFI 103
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
LE K+ LPV D +L G++T + V+ A+ +
Sbjct: 104 LEQKHGCLPVF-RDQQLTGMLTEADFVKLAIHL 135
>gi|395777171|ref|ZP_10457686.1| hypothetical protein Saci8_45729 [Streptomyces acidiscabies 84-104]
Length = 222
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG MT E +H V P T E +L RI+G PV+D D K++G+VS+ DLLA
Sbjct: 6 VGSVMTA-EVVHAV-PDTPFKEVARLLSRHRISGLPVVDGDDKVLGVVSETDLLA----- 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P + ++ +K + G LM+ PV V + +AAR +
Sbjct: 59 ------RQAAPVASGPARLTRAARRRTAKATARTAGQLMSGPPVTVHADDTIAEAARTMA 112
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
E + RLPV+D + +LVGI+TRG+++R L+
Sbjct: 113 ERRVERLPVLDVEDRLVGIVTRGDLLRVFLR 143
>gi|413961463|ref|ZP_11400691.1| putative signal transduction protein [Burkholderia sp. SJ98]
gi|413930335|gb|EKS69622.1| putative signal transduction protein [Burkholderia sp. SJ98]
Length = 212
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 8/135 (5%)
Query: 110 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 169
+LV+ RI+ PV+D D ++VG++S+ DLL + I R S + +D
Sbjct: 7 LLVQHRISAAPVVDQDERVVGMISEGDLLHREEIGTEKRNRRSWW--LDMLGSDGGAADY 64
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
+ K++ VG++MT P+ V+E T+L D A +L +R+PV+ DG+LVGI++R N+
Sbjct: 65 I--KSHAPTVGEIMTREPICVKEDTSLADIAAVLESHHIKRVPVL-RDGRLVGIVSRSNL 121
Query: 230 VRA---ALQIKHATE 241
V+A AL ++ A E
Sbjct: 122 VQALASALAVEAAPE 136
>gi|330816985|ref|YP_004360690.1| signal-transduction protein [Burkholderia gladioli BSR3]
gi|327369378|gb|AEA60734.1| signal-transduction protein [Burkholderia gladioli BSR3]
Length = 230
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 7/146 (4%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E +H +P ++ EA +L + I+ PV+D D KLVG+VS+ DLL I G+
Sbjct: 5 DVMTP-EVIHA-RPEMSIREAAALLAKHSISALPVLDSDGKLVGIVSEGDLLRRYEI-GT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
G S + ++ + + E+ K + + V D+MT V V E T L D A +L
Sbjct: 62 GDRHRSWWLQLLT---SNRELASEYVKEHERSVKDVMTAEVVTVYEDTPLADIAEVLERH 118
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PV+ +G++ GI++R N+VRA
Sbjct: 119 RIKRVPVMK-NGRMTGIVSRANLVRA 143
>gi|288932855|ref|YP_003436915.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288895103|gb|ADC66640.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 259
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 35/151 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT +++ VVKP T+ E ++++ + GFPVIDD+ ++G +S DLL
Sbjct: 5 VKDYMT--KDVVVVKPDQTIKEVIDLIEKTGHDGFPVIDDNGIVIGYISSRDLL------ 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
K V D+M+ +V RE +L DAAR++
Sbjct: 57 ---------------------------RKNLDTKVKDVMSKKLIVAREHMDLRDAARVMF 89
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
T +LPV+D GKL+GII+ +V+R+ ++
Sbjct: 90 RTGRSKLPVIDEKGKLIGIISNTDVIRSQIE 120
>gi|366163366|ref|ZP_09463121.1| putative signal transduction protein with CBS domains [Acetivibrio
cellulolyticus CD2]
Length = 149
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 23/158 (14%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M+T ++ +K TTV+E +L EK I+G PV+DD K++G+VS+ DLL D
Sbjct: 5 DIMST--DVIAIKKDTTVEEIAHLLSEKNISGVPVLDDSSKVIGMVSEKDLLYKDI---- 58
Query: 147 GRADNSMFPEVDS---------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
FP V + K +NE + L T + ++MT V + T +E
Sbjct: 59 ----EPHFPPVVEILGGLIFLKSVKQYNEELRKLVATRAE---EIMTKKVVTIGPDTEVE 111
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
A L++E R+PVVD + KLVGII+R +V++ Q
Sbjct: 112 RIAELMIEKDINRIPVVD-NQKLVGIISRADVIKYISQ 148
>gi|399911758|ref|ZP_10780072.1| hypothetical protein HKM-1_18687 [Halomonas sp. KM-1]
Length = 231
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T V E +L+E I+ PV++DD K++G+VS+ DL+ +G+ R +
Sbjct: 14 VSPETDVREIARLLLEHNISALPVVEDDGKVLGIVSEGDLMRRVE-NGTERRKSWWL--- 69
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S + N + + K++ + ++MTP P+ + E L A+LL + +R+PVV D
Sbjct: 70 KSIFAGANNASEYI-KSHARKAHEIMTPNPITIDEDEPLHRVAKLLEKHHIKRVPVV-RD 127
Query: 218 GKLVGIITRGNVVRA 232
GKLVGI++R N++R
Sbjct: 128 GKLVGIVSRANLLRG 142
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MTP + V T++ + ARLLLE LPVV+ DGK++GI++ G+++R ++++ T
Sbjct: 5 DVMTPRVITVSPETDVREIARLLLEHNISALPVVEDDGKVLGIVSEGDLMR---RVENGT 61
Query: 241 E 241
E
Sbjct: 62 E 62
>gi|116249833|ref|YP_765671.1| hypothetical protein RL0067 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254481|emb|CAK05555.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 222
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M TK + V P +V A EI++ ++G PVIDD +LVG++S+ DLL +
Sbjct: 3 VKDVMITK--VVGVSPDNSVRRAAEIMLANHVSGVPVIDDAGRLVGIISEGDLLRRTELG 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A E+ ++ T E ++N V D+M+ P+VV T+L + L+
Sbjct: 61 REATA------ELGTSALTAEEKATAYVRSNAWRVADVMSCDPIVVEGDTSLARVSALMQ 114
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
E +RLPV+ DG LVGI++R ++++A
Sbjct: 115 EHHIKRLPVM-RDGVLVGIVSRADLLKA 141
>gi|357040593|ref|ZP_09102379.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356394|gb|EHG04183.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 154
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
GD MTT ++ V +++ +L+E RI+G PV+DD KLVG+VS+ DL+ +
Sbjct: 5 GDIMTT--DVITVNTHDDLEKVARLLLEHRISGLPVVDDGGKLVGVVSEADLVFQEKPVR 62
Query: 146 SGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ D+ ++ E + + ++++ +++ VG+LM+ V ++ D A
Sbjct: 63 TPFYVVIFDSPIYLERPNRF--IEDIKRAIAQK----VGELMSTNLYTVGPEASIRDVAT 116
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
++ E R+PVVD DGKL+GIITR ++++A+L
Sbjct: 117 IIAEKGVNRVPVVDVDGKLIGIITRQDIIKASL 149
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
K GD+MT + V +LE ARLLLE + LPVVD GKLVG+++ ++V
Sbjct: 2 KKAGDIMTTDVITVNTHDDLEKVARLLLEHRISGLPVVDDGGKLVGVVSEADLV 55
>gi|318041619|ref|ZP_07973575.1| CBS [Synechococcus sp. CB0101]
Length = 144
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSM 153
V TT + EA++++ E I+G PV+D+ LVG +++ DL+ +S +G D +
Sbjct: 8 VSTTTPLQEAVKLMSEHHISGLPVVDESGALVGELTEQDLMVRESGFDAGPYVMLLDAVI 67
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W EV ++L G VG+LM+ P T L AAR L + +RL V
Sbjct: 68 YLRNPLNWD--KEVHQVL----GSTVGELMSKHPHHCSPDTQLPAAARQLHDRSTQRLFV 121
Query: 214 VDADGKLVGIITRGNVVRA 232
+DA K VG++TRG+VVRA
Sbjct: 122 LDAANKPVGVLTRGDVVRA 140
>gi|452851187|ref|YP_007492871.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451894841|emb|CCH47720.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 149
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT E + P T V A L+E +I G PVID+ ++VG++ DL+A
Sbjct: 6 DIMTT--ECITLTPDTDVATAARTLIENKINGAPVIDN-GQVVGVLCQADLVA----QQK 58
Query: 147 GRADNSMFPEVDSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S F +D + + E+++ + K + VG+ MTPAP+ + T +ED A ++
Sbjct: 59 KVTLPSFFTLLDGVFPLSSHEELEREMKKISALTVGEAMTPAPIFISPETKMEDIATMMA 118
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
K LPV+D D KLVG++ + +V++ LQ
Sbjct: 119 NEKLYTLPVLD-DDKLVGVVGKEDVLKTLLQ 148
>gi|212704299|ref|ZP_03312427.1| hypothetical protein DESPIG_02354 [Desulfovibrio piger ATCC 29098]
gi|212672261|gb|EEB32744.1| CBS domain protein [Desulfovibrio piger ATCC 29098]
Length = 218
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 17/148 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T++ + +L E +I PV+DD ++VG++SD D + G+ +
Sbjct: 14 VKPDTSLLKCRNLLKEHQIRRLPVVDDQNRVVGIISDRD------VKGASPSK------- 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+T +E+Q LL++ K D+MT PV ++ ++E AA L+++ K+ LPVV D
Sbjct: 61 -ATALEVHEMQYLLAELKAK---DIMTAKPVTIKPWDSVEQAAILMMDKKFGGLPVVSED 116
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
KLVGIIT ++ + + I A G Q
Sbjct: 117 NKLVGIITDQDIFKLLINITGARVEGMQ 144
>gi|210624234|ref|ZP_03294262.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
gi|210153128|gb|EEA84134.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
Length = 155
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
++ VK TV + ++L++ +I G PV+D+D K++G++S+ D+L + R N
Sbjct: 14 DVKTVKKDDTVSDVAKMLIQDKIGGLPVVDEDNKVIGIISETDILKKEKYIEPPRVIN-- 71
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
F + ++K L + V DLMT V V E +D A ++++ R+PV
Sbjct: 72 FLQGLIFLDDMKNLEKDLKRIAAYKVEDLMTEDIVTVHEDDKFDDVANVMIKKSINRVPV 131
Query: 214 VDADGKLVGIITRGNVVRA 232
VD DGK+ GII R +++++
Sbjct: 132 VDDDGKIKGIICRYDIIKS 150
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
Y V D MT E++ V D+ ++++K I PV+DDD K+ G++ YD++
Sbjct: 95 YKVEDLMT--EDIVTVHEDDKFDDVANVMIKKSINRVPVVDDDGKIKGIICRYDII 148
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
++MT V++ + D A++L++ K LPVVD D K++GII+ ++++ I+
Sbjct: 9 EIMTVDVKTVKKDDTVSDVAKMLIQDKIGGLPVVDEDNKVIGIISETDILKKEKYIE 65
>gi|383770464|ref|YP_005449527.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
gi|381358585|dbj|BAL75415.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
Length = 242
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ I+G V+DD KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHISGLTVVDDSGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT PV + E T L + L+ +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRKVSEVMTAKPVTITEDTALAEIVDLMERNNVKRLPVVRGD 128
Query: 218 GKLVGIITRGNVVRA 232
K+VGI++R N+++A
Sbjct: 129 -KVVGIVSRANLLQA 142
>gi|384532132|ref|YP_005717736.1| putative signal transduction protein [Sinorhizobium meliloti
BL225C]
gi|384541151|ref|YP_005725234.1| hypothetical protein SM11_pC1352 [Sinorhizobium meliloti SM11]
gi|333814308|gb|AEG06976.1| putative signal transduction protein with CBS domains
[Sinorhizobium meliloti BL225C]
gi|336036494|gb|AEH82425.1| conserved hypothetical protein [Sinorhizobium meliloti SM11]
Length = 223
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 90/158 (56%), Gaps = 19/158 (12%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSG--RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ SG+ AD ++ P+ + + + + + VGD+MT PV + E L
Sbjct: 59 LCSGASVLMADMAIDPD--------DRANAFIRRCSWR-VGDVMTANPVTIEEEAPLARV 109
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
A L+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 110 AGLMQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V + ++ AA+L+ + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|357419743|ref|YP_004932735.1| hypothetical protein Tlie_0905 [Thermovirga lienii DSM 17291]
gi|355397209|gb|AER66638.1| CBS domain containing protein [Thermovirga lienii DSM 17291]
Length = 157
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 18/128 (14%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------LDSISGSGRADNSMFPEVDS 159
+AL +L +R++G PV+ DDW LVG +S+ D+L L+ ++ S D+
Sbjct: 26 DALHVLYSQRLSGVPVVRDDWVLVGFLSEKDILQGAVPTYLEVLAQSTFLDDC------- 78
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
N +Q+L + K V DLMT PV V +L A L+L K +RLPVV DGK
Sbjct: 79 ---EGNLLQRLCAMGKQK-VKDLMTKDPVYVTPEASLMTVADLMLRKKIKRLPVV-QDGK 133
Query: 220 LVGIITRG 227
LVGII RG
Sbjct: 134 LVGIIDRG 141
>gi|310659366|ref|YP_003937087.1| CBS domain containing protein [[Clostridium] sticklandii]
gi|308826144|emb|CBH22182.1| CBS domain containing protein [[Clostridium] sticklandii]
Length = 150
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSM 153
V + +V++A+++L+E ITG PV+D+ ++G++++ DL+ R D+ +
Sbjct: 14 VSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIKPPRYLAIFDSYI 73
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
F +D+ K +K L K G V D+MT +V+ ++ DAA L+ + K RLPV
Sbjct: 74 F--IDNPSK----FEKQLKKMTGMFVEDVMTTPVIVIEAEQSVPDAANLMTKHKVNRLPV 127
Query: 214 VDADGKLVGIITRGNVVRA 232
++ +GKLVGII+R +++++
Sbjct: 128 IE-EGKLVGIISRRDIIKS 145
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
D+MTP + V ++ ++E A +LLLE LPVVD ++GIIT G+++ +IK
Sbjct: 5 DIMTPNVITVSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIK 61
>gi|220922314|ref|YP_002497616.1| hypothetical protein Mnod_2338 [Methylobacterium nodulans ORS 2060]
gi|219946921|gb|ACL57313.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 247
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 29/161 (18%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT +E+ V+ +V+ A+ +++EKRI+G PV+D D +VG+VS+ DLLA
Sbjct: 5 DIMT--KEVTSVRADLSVELAIALMLEKRISGLPVLDPDCAVVGIVSEGDLLA------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLE 197
PE+ + VQ L+S + G+ VGD+MT V T L+
Sbjct: 56 -------RPELGTARPKPGWVQYLISPGRLAEAYARERGRRVGDVMTREVVTASPETPLD 108
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA---ALQ 235
+ L+ + +R+P+V+ G+LVG++TR +++R+ ALQ
Sbjct: 109 EIVDLMTRRRIKRVPIVEG-GRLVGLVTRADLLRSLRRALQ 148
>gi|291296715|ref|YP_003508113.1| hypothetical protein [Meiothermus ruber DSM 1279]
gi|290471674|gb|ADD29093.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
Length = 145
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + VV P V EA +I+ + PV+++ +LVG+V+D DL
Sbjct: 3 VKDFMTPDPQ--VVTPDVAVPEAAQIMKKGGFRRLPVVEEG-RLVGIVTDRDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P D+T + E+ L+S+ + VG++MT P+ V +T L+ AA+L+L
Sbjct: 53 ------KEAMPS-DATSLSIWEINYLISRLS---VGEIMTRDPISVADTLPLQAAAKLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
E K LPVV +GKLVGI+T +V+RA LQ + +GA+
Sbjct: 103 EYKVGGLPVVH-EGKLVGIVTVTDVLRAFLQREAELLVGAE 142
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+V D MTP P VV + +AA+++ + +RRLPVV+ +G+LVGI+T
Sbjct: 2 LVKDFMTPDPQVVTPDVAVPEAAQIMKKGGFRRLPVVE-EGRLVGIVT 48
>gi|427418510|ref|ZP_18908693.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425761223|gb|EKV02076.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 164
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 6/138 (4%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P ++ +A+++L RI+G PV+D + VG +S+ DL+ +SG+ M +DS
Sbjct: 28 PEMSLKDAIQLLATHRISGLPVVDATGEAVGEISETDLMW--QVSGASLPAYVML--LDS 83
Query: 160 TWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
N + + L K G+ V D+M+ VV+ +L+ AA+L+ + + RRL VVD D
Sbjct: 84 IVYLTNPARYSQELHKALGQTVADVMSRKVTVVQADDDLQRAAQLMHDKQIRRLVVVDDD 143
Query: 218 GKLVGIITRGNVVRAALQ 235
++GI+TRG++VR Q
Sbjct: 144 RHVIGILTRGDIVRELAQ 161
>gi|392382251|ref|YP_005031448.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
gi|356877216|emb|CCC98025.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
Length = 233
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 12/146 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT ++ + P TV EA + ++E RI+G PV D + +L+G++S+ DLL
Sbjct: 5 DIMT--RQVVTIGPDATVTEAAKRMLENRISGLPVCDSNGRLLGVISEGDLLRRTETGTV 62
Query: 147 GRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
RA +MF + + +K++G+ V D MT + + V E T L++ RL+
Sbjct: 63 RRASWWLAMFAGAPNQAADY-------TKSHGRHVRDAMTESLISVTEETPLDEVVRLME 115
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVV 230
+ +R+PV++ +GKLVGI++R N++
Sbjct: 116 GNRIKRVPVLN-NGKLVGIVSRANLL 140
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MT V + + +AA+ +LE + LPV D++G+L+G+I+ G+++R
Sbjct: 5 DIMTRQVVTIGPDATVTEAAKRMLENRISGLPVCDSNGRLLGVISEGDLLR 55
>gi|11498858|ref|NP_070087.1| inosine monophosphate dehydrogenase [Archaeoglobus fulgidus DSM
4304]
gi|2649320|gb|AAB89984.1| inosine monophosphate dehydrogenase, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 259
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 35/151 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + ++ +KP TV +A+E++ + FPV+DD+ ++VG +S DLL
Sbjct: 5 VKDYMT--KNVYTLKPDNTVKDAIELVRKTGHDSFPVVDDNMRVVGYISAVDLL------ 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S PE + D+M+ V R+ +L DAAR++
Sbjct: 57 -----DKS--PET--------------------KIRDIMSRELYVARDFMDLRDAARVMF 89
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
T + +LPVVD D +LVGII+ +V+R+ ++
Sbjct: 90 RTGHSKLPVVDEDNRLVGIISNADVIRSQIE 120
>gi|407690602|ref|YP_006814186.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
gi|407321777|emb|CCM70379.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
Length = 223
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 15/156 (9%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ SG+ +M + D F + + + + VGD+MT PV + E L A
Sbjct: 59 LCSGASVLMANMAIDPDDRANAF------IRRCSWR-VGDVMTANPVTIEEEAPLARVAG 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
L+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 112 LMQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V + ++ AA+L+ + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|172065495|ref|YP_001816207.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171997737|gb|ACB68654.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 230
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P +V E ++L E I+ PVID + KL+G+VS+ DL+ I
Sbjct: 5 DVMTTP--VIFASPEMSVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVRRVEIGTH 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + + ST + +E K S+T V DLM+ V V E T L + A LL
Sbjct: 63 ARRRSWWLELLASTRELASEYVKEHSQT----VKDLMSVDVVTVAEDTPLSEVAELLERH 118
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PVVD +GK+ G+++R ++VRA
Sbjct: 119 RIKRVPVVD-NGKVAGLVSRADLVRA 143
>gi|209517837|ref|ZP_03266671.1| CBS domain containing membrane protein [Burkholderia sp. H160]
gi|209501670|gb|EEA01692.1| CBS domain containing membrane protein [Burkholderia sp. H160]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ +A ++ V+ I G PV+D + +++G+VS DLL +G+GR + E+ S
Sbjct: 16 PDMTIHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLLHRVE-TGTGRGKRRWWLELLS 74
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ + E K +G +VGD+M + + E L A L+ +R+PV+ DG+
Sbjct: 75 S--SAREQAARYVKEHGHIVGDVMCDNVISIPEDMPLNQIADLMGRRHLKRVPVL-KDGR 131
Query: 220 LVGIITRGNVVRA 232
LVGI++R N++RA
Sbjct: 132 LVGIVSRSNLIRA 144
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 34/51 (66%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MT + + + DAA+L ++ +PV+DA+G+++GI+++G+++
Sbjct: 5 DIMTSSVITATPDMTIHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLLH 55
>gi|91773317|ref|YP_566009.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712332|gb|ABE52259.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
Length = 154
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D M++ + V P T+ ++L +K I+G PV+D+ K+VG+VS+ DLL L +
Sbjct: 1 MNVKDIMSSN--VIVCSPQDTISSTAQLLKKKNISGVPVVDEG-KVVGIVSEVDLLKLLN 57
Query: 143 I-SGSGRADNSMFPEVDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
I G S F ++ + + + +K+LS K V D+M + +++ED
Sbjct: 58 IPEHGGLWLPSPFEIIEIPIRELIGWEDTKKMLSDVGSKPVSDIMEKDVFTIGLESSVED 117
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A+R + K RLPVVD +G++VG+ITRG+++R
Sbjct: 118 ASRSMSRHKINRLPVVD-NGEIVGLITRGDIIRG 150
>gi|258405823|ref|YP_003198565.1| hypothetical protein Dret_1703 [Desulfohalobium retbaense DSM 5692]
gi|257798050|gb|ACV68987.1| CBS domain containing membrane protein [Desulfohalobium retbaense
DSM 5692]
Length = 148
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MTT + V+ T + EA + L+E I G PV+DD+ +LVG++ DL+
Sbjct: 3 TVADIMTTN--VITVQKDTPIGEAAKKLLENHINGVPVVDDEGRLVGILCQSDLIT---- 56
Query: 144 SGSGRADNSMFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ N P V + F +++K + K V MTP P+ V T+L
Sbjct: 57 ----QQKNFPLPTVFTILDGFIPLSSMGQMEKQVQKIAATTVEQAMTPDPITVTADTDLN 112
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
AA L+++ + LPVVD + LVG++ + +V++ L
Sbjct: 113 QAASLMVDKNFHTLPVVDGE-TLVGVLGKEDVLKTLL 148
>gi|377820772|ref|YP_004977143.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357935607|gb|AET89166.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D MTT + V TTV E +L++ RI+ PVID + +++G+VS+ DLL +D+
Sbjct: 5 DVMTTA--VVSVTSETTVHELALLLMQHRISAAPVIDANRRVIGMVSEGDLLHREEIDTE 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
GR S + E+ T + + K++ + VG++MT PV V E +L + A +L
Sbjct: 63 KTQGR--QSWWLEMLGTDRGAGD----YIKSHARTVGEIMTREPVCVNEDASLANIASVL 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PV+ DG+LVGI++R N+V+A
Sbjct: 117 ESRQIKRVPVL-RDGRLVGIVSRSNLVQA 144
>gi|220910106|ref|YP_002485417.1| hypothetical protein Cyan7425_4751 [Cyanothece sp. PCC 7425]
gi|219866717|gb|ACL47056.1| CBS domain containing membrane protein [Cyanothece sp. PCC 7425]
Length = 154
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 25/158 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT VKPT ++ ++++ + R+ G PV+D+D K+VG++S+ DLL ++
Sbjct: 6 VQDFMTPNPI--TVKPTDSIATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLLVREA-- 61
Query: 145 GSGRADNSMFPEVDSTWKTF----------NEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
P + TF + L K+ +V D+MTP P T
Sbjct: 62 ----------PLQAPLYLTFLGSVIYFESPESFHQHLKKSLSMLVQDVMTPHPTTTTPET 111
Query: 195 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ D A L++E RLPV+DA GKLVGII+R +++RA
Sbjct: 112 PIADVAHLMVEKHIDRLPVIDA-GKLVGIISRRDLIRA 148
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN-VVRAA 233
+V D MTP P+ V+ T ++ +L+ + + R LPVVD DGK+VG+I+ G+ +VR A
Sbjct: 5 LVQDFMTPNPITVKPTDSIATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLLVREA 61
>gi|433616661|ref|YP_007193456.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
gi|429554908|gb|AGA09857.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
Length = 223
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 15/156 (9%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ SG+ M + D F + + + + VGD+MT PV + E L A
Sbjct: 59 LCSGASVLMAEMAIDPDDRANAF------IRRCSWR-VGDVMTANPVTIEEEAPLARVAG 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
L+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 112 LMQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V + ++ AA+L+ + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|374301056|ref|YP_005052695.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553992|gb|EGJ51036.1| CBS domain containing membrane protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 152
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+++ D M+T ++ P T + A +L+EKRI G PV++ D +LVG++S DL+A
Sbjct: 1 MFSAKDIMST--QVITFTPDTEIVAAARVLLEKRINGAPVVEGD-RLVGILSQTDLVA-- 55
Query: 142 SISGSGRADNSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
++F +D +++ ++ + + K + VG+ MT PV VR T + D
Sbjct: 56 --QQKTLTMPTLFTLLDGFIPLRSYEKLDEDMRKISAMTVGEAMTVKPVTVRPDTTITDI 113
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
A++++E K LPVV+ D +LVG+I + +V+R L
Sbjct: 114 AQIMVEKKIHTLPVVEGD-RLVGVIGKEDVLRTLLN 148
>gi|224025972|ref|ZP_03644338.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
18228]
gi|224019208|gb|EEF77206.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
18228]
Length = 491
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 33/136 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVKDALDIMSEYKIGGIPVVDDENYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDA 216
D ++MT +V E T++E A+++L E K +LPVVD
Sbjct: 154 D----------------------EVMTKENIVTTEQGTDMETASKILQENKIEKLPVVDK 191
Query: 217 DGKLVGIITRGNVVRA 232
DGKL+G+IT ++ +A
Sbjct: 192 DGKLIGLITYKDITKA 207
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + + T ++ A +IL E +I PV+D D KL+GL++ D+
Sbjct: 154 DEVMTKENIVTTEQGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDI 204
>gi|221635717|ref|YP_002523593.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
gi|221158173|gb|ACM07291.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
Length = 462
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS--ISGSGRADNSMFP 155
V P T+++ ++++++I PV+D D +L+GL+ + D LA + + RA P
Sbjct: 317 VGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQEKPIPFAAFRA-----P 371
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
++ W ++++ ++ GD+ V V E T L A+L++E R +PVV
Sbjct: 372 QLFGHWLNAEGIERIYAEARTMKAGDVAQAPAVTVTEDTPLSRIAQLMVERDVRHIPVVR 431
Query: 216 ADGKLVGIITRGNVVRA 232
DGKLVGI+TR +V++A
Sbjct: 432 -DGKLVGIVTRHDVLKA 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
D+MTP PV V LE ARL+L+ + +PVVDADG+L+G+I
Sbjct: 308 DIMTPDPVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLI 351
>gi|315506341|ref|YP_004085228.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|315412960|gb|ADU11077.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 234
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ V+ T E +++L E+ +T PV+D+ +++G+VS+ DL+
Sbjct: 4 WQVQDVMT--RDVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVE 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G R + + P+ ++ +K + DLMT PV + + +AARL
Sbjct: 62 FLGQPR-ERRILPD--------RHRREARAKAGATLAADLMTAPPVTITPDATIVEAARL 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLPVV+ G+LVGI+TRG++++ L+
Sbjct: 113 MDARGVKRLPVVNDLGRLVGIVTRGDLLKVHLR 145
>gi|410696692|gb|AFV75760.1| putative transcriptional regulator, contains C-terminal CBS domains
[Thermus oshimai JL-2]
Length = 150
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 17/157 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT V P T++ A EIL+EKR G PV+D + +L+GL+ DLL
Sbjct: 3 VQDLMTQNP--VCVGPEETLERAAEILLEKRYGGLPVVDGEGRLLGLLQVEDLLP----- 55
Query: 145 GSGRADNSMFPEVDSTWKTFNE------VQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
R +N F +V++ W+ F E ++++ + V M V L +
Sbjct: 56 ---RPENIPFSDVEA-WQLFGEWVDEGVLEEIYRRYQKTPVEAAMQREIPRVHPEDPLGE 111
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
A R+L+ T R LPVVD +G++VGIITR + ++ L+
Sbjct: 112 ALRILVTTGVRHLPVVDGEGRVVGIITRSDFLKFFLR 148
>gi|405377370|ref|ZP_11031313.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397326183|gb|EJJ30505.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 15/156 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTTK + + P +V A +++ ++ ++G PV+DD+ +L+G++S+ DL+ +S
Sbjct: 3 VKDVMTTK--VVGLSPDHSVRHAAKLMSDQHVSGVPVVDDEGRLLGVISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+AD + +E K G VGD+MTP PV + E L A
Sbjct: 61 SGAFVLKADMGV---------GADERANAFVKRCGWRVGDVMTPDPVTIDEDAPLSRVAS 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
L+ + +R+PV+ DGKLVGI++R ++++ K
Sbjct: 112 LMQDHGIKRIPVL-RDGKLVGIVSRADLLQVIYSAK 146
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V + ++ AA+L+ + +PVVD +G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVGLSPDHSVRHAAKLMSDQHVSGVPVVDDEGRLLGVISEGDLIR 55
>gi|303325679|ref|ZP_07356122.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345892287|ref|ZP_08843110.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
gi|302863595|gb|EFL86526.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345047426|gb|EGW51291.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
Length = 222
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MTT E+ V P T++ + +++ + + PV+DD +VG++SD D+
Sbjct: 3 VQNWMTT--EVITVTPETSLLKIGKLMRDNSVRRLPVLDDKGHVVGIISDRDV------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T + E+ LL++ K D+MTP P V+ T +E AA L+L
Sbjct: 54 ----RDAS--PSKATTLDMY-EMHYLLAELKAK---DIMTPRPFTVKPTDTVEKAAMLML 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K+ LPVV+ G+LVGII+ +V +A + I E G Q
Sbjct: 104 DNKFGGLPVVEESGRLVGIISDQDVFKALVSITGVREGGIQ 144
>gi|219848345|ref|YP_002462778.1| hypothetical protein Cagg_1435 [Chloroflexus aggregans DSM 9485]
gi|219542604|gb|ACL24342.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 427
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 13/160 (8%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A A P+ TV MT ++ V T V E + +L+E+ + PVID D K+VG+V
Sbjct: 110 AGGALPAH--LTVAHVMT--HDVVSVTVDTPVGEVVRLLIERGLRAMPVIDADRKVVGIV 165
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS-KTNGKMVGDLMTPAPVVVR 191
+D DLL R + + + + +L + + + VG++MTP P +
Sbjct: 166 TDADLLQ--------RGVSQLPLHLQQLLPNDDRAAQLAAVASRPERVGEVMTPNPTTIP 217
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
T +L AA ++ + ++RLPVVD +G+LVGII+R ++++
Sbjct: 218 ATASLAQAALVMTKNDHKRLPVVDNEGRLVGIISRSDLLQ 257
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ M ++ VV P T++ E L+ ++ VID D +++G+VSD D+L
Sbjct: 279 TVGEVMA--RDVPVVTPDTSLSETLDRILSTPRRRAVVIDQDRRVIGIVSDGDILR---- 332
Query: 144 SGSGRADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
RA + P + + + +L + ++MT + V T + A
Sbjct: 333 ----RAMRPVSPGLLQRFAMWIGGGTRSPELALALQNQTAANVMTSPVITVTPDTPITTA 388
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
++ + +RLPV+D G+LVG++ R ++ A L
Sbjct: 389 IEQMIAHRIKRLPVIDDQGRLVGMVGRAALLGALL 423
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A AA +S VG+ MT + T ++ +A ++ + PV+D++ +LVG++
Sbjct: 193 AQLAAVASRPERVGEVMTPNPT--TIPATASLAQAALVMTKNDHKRLPVVDNEGRLVGII 250
Query: 133 SDYDLL--ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
S DLL ++ + SG ++ F VG++M VV
Sbjct: 251 SRSDLLQTVANNFAISGETLSAEF-------------------VTATTVGEVMARDVPVV 291
Query: 191 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
T+L + +L T RR V+D D +++GI++ G+++R A++
Sbjct: 292 TPDTSLSETLDRILSTPRRRAVVIDQDRRVIGIVSDGDILRRAMR 336
>gi|424887384|ref|ZP_18310989.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393175156|gb|EJC75199.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 225
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 86/145 (59%), Gaps = 10/145 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTTK + + P +V A+ ++++ R++G PV+DD ++ G+V++ DLL + +
Sbjct: 5 DIMTTK--VVSISPAVSVRHAVAMMLQNRVSGLPVVDDQGRVCGMVTEGDLLLRREVRLT 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + PE+ S ++++ + +NG V D+M+ +V R + + D A L
Sbjct: 63 PRPARA--PELISEI----DLERYIC-SNGWCVTDVMSQDVIVARPDSEVSDIAESLQAH 115
Query: 207 KYRRLPVVDADGKLVGIITRGNVVR 231
+ +RLP+V+ DG+LVGI++R +++R
Sbjct: 116 RIKRLPIVE-DGRLVGIVSRRDILR 139
>gi|452209080|ref|YP_007489194.1| CBS domain protein [Methanosarcina mazei Tuc01]
gi|452098982|gb|AGF95922.1| CBS domain protein [Methanosarcina mazei Tuc01]
Length = 154
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEV 157
KP TV EA +IL E I+G PV++D KLVG+VS+ DLL L I G S F +
Sbjct: 15 KPENTVREAAKILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPSPFEII 73
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +K+LS + ++MT + + ++E+A+ L++ + RLPV+
Sbjct: 74 EVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVI 133
Query: 215 DADGKLVGIITRGNVVRA 232
+ +G +VGI+TRG+++
Sbjct: 134 E-NGYVVGIVTRGDIIEG 150
>gi|325959819|ref|YP_004291285.1| hypothetical protein Metbo_2094 [Methanobacterium sp. AL-21]
gi|325331251|gb|ADZ10313.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
Length = 159
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 9/125 (7%)
Query: 113 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-TFN 165
+ +I+G PV+D++ +VG++S+ D++ L I N + P E+ K +
Sbjct: 29 DNKISGAPVVDENNHVVGVISEGDIMRLIEIHSPKI--NLILPAPLDLIELPIKMKYELD 86
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
EV + + K ++ +MT + V+ T++ DAA+LL K +RLPV+D DGKLVGIIT
Sbjct: 87 EVAEDMQKAGSTVIDQIMTKKIIKVKPDTSVIDAAKLLDSHKIKRLPVIDNDGKLVGIIT 146
Query: 226 RGNVV 230
RG+++
Sbjct: 147 RGDII 151
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
TV D + TK+ + V KP T+V +A ++L +I PVID+D KLVG+++ D++A
Sbjct: 98 TVIDQIMTKKIIKV-KPDTSVIDAAKLLDSHKIKRLPVIDNDGKLVGIITRGDIIA 152
>gi|221632888|ref|YP_002522110.1| hypothetical protein trd_0888 [Thermomicrobium roseum DSM 5159]
gi|221156067|gb|ACM05194.1| CBS domain protein/ACT domain protein [Thermomicrobium roseum DSM
5159]
Length = 162
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 35/139 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E + V+P TTV+E +L+ RITG PVID+ +++G+VS++DLLA
Sbjct: 17 ENVVTVRPNTTVEEVARLLMTHRITGVPVIDEAGRVLGIVSEFDLLA------------- 63
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G G++MT + V E T E A L+++ + RR+P
Sbjct: 64 ---------------------KRGHTAGEIMTRDVIAVTEETPAEAIADLIVQQRVRRVP 102
Query: 213 VVDADGKLVGIITRGNVVR 231
V+ +G+LVGI+TR +++R
Sbjct: 103 VLK-EGRLVGIVTRADLIR 120
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
++MT V VR T +E+ ARLL+ + +PV+D G+++GI++
Sbjct: 13 EIMTENVVTVRPNTTVEEVARLLMTHRITGVPVIDEAGRVLGIVS 57
>gi|150398194|ref|YP_001328661.1| signal-transduction protein [Sinorhizobium medicae WSM419]
gi|150029709|gb|ABR61826.1| putative signal-transduction protein with CBS domains
[Sinorhizobium medicae WSM419]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 13/155 (8%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV++DD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDYHVSGVPVVNDDGRLLGVISEGDLIRRTE 58
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ + D T N + + + + VGD+MT PV + E L A L
Sbjct: 59 LCSGASVLMA-----DMTIDPVNRANAFIRRCSWR-VGDVMTADPVTIEEEAPLARVAGL 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 113 MQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V + ++ AA+L+ + +PVV+ DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDYHVSGVPVVNDDGRLLGVISEGDLIR 55
>gi|385209203|ref|ZP_10036071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385181541|gb|EIF30817.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 229
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV E I V+ I+G PV+D L G++S+ DLL I R +S
Sbjct: 14 VTPDMTVREVARIFVDNGISGAPVLDPQGHLAGMISEGDLLRRTEIGTDERKPSSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W +E + + KT+ V D+MTP V V+ T L + A +L + +R+PV A
Sbjct: 71 -DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVTQA- 127
Query: 218 GKLVGIITRGNVVRA 232
G++VGI++R N+V+A
Sbjct: 128 GRVVGIVSRANLVQA 142
>gi|21226577|ref|NP_632499.1| inosine-5'-monophosphate dehydrogenase [Methanosarcina mazei Go1]
gi|20904852|gb|AAM30171.1| putative inosine-5'-monophosphate dehydrogenase [Methanosarcina
mazei Go1]
Length = 169
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEV 157
KP TV EA +IL E I+G PV++D KLVG+VS+ DLL L I G S F +
Sbjct: 30 KPENTVREAAKILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPSPFEII 88
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +K+LS + ++MT + + ++E+A+ L++ + RLPV+
Sbjct: 89 EVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVI 148
Query: 215 DADGKLVGIITRGNVVRA 232
+ +G +VGI+TRG+++
Sbjct: 149 E-NGYVVGIVTRGDIIEG 165
>gi|86140967|ref|ZP_01059526.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
gi|85832909|gb|EAQ51358.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
Length = 153
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTTK L P +V + ++ L++ RI+G PV++++++L+G++S+ D + IS
Sbjct: 22 VSDYMTTK--LITFTPDQSVMDVMQKLIKHRISGAPVVNENYELLGVISEGD--CIKHIS 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S R N P ++T VG M + N+ DAAR +
Sbjct: 78 DS-RYHN--LPMDNAT------------------VGQNMAIDVETIDGNMNVFDAARFFI 116
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
E K+RR P+V+ +GKLVG I++ +V++AAL+++ T
Sbjct: 117 ERKHRRFPIVE-NGKLVGQISQMDVIKAALKLRGNT 151
>gi|170076975|ref|YP_001733613.1| hypothetical protein SYNPCC7002_A0347 [Synechococcus sp. PCC 7002]
gi|169884644|gb|ACA98357.1| CBS domain protein [Synechococcus sp. PCC 7002]
Length = 155
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 13/157 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL----LA 139
TV + MT VVK ++ A+ +LVEK+I+ PV+D KLVG++SD DL
Sbjct: 5 TVAEVMTPDPA--VVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQETG 62
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+D+ D+ ++ + + K E+ K L G+ VG++M+ + + +A
Sbjct: 63 VDTPPYIMLLDSVIY--LQNPAKHDAEIHKAL----GQTVGEVMSKKVYTIHPEKIVREA 116
Query: 200 ARLLLETKYRRLPVVDADG-KLVGIITRGNVVRAALQ 235
A L+ E RLPV+ D K++GIIT+G+++RA Q
Sbjct: 117 AHLMHEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQ 153
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
K V ++MTP P VV+ +L+ A LL+E K LPVVD GKLVGII+ ++
Sbjct: 4 KTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDL 56
>gi|448746918|ref|ZP_21728582.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
gi|445565428|gb|ELY21538.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
Length = 236
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 85/147 (57%), Gaps = 11/147 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
D MT K + V P V E ++L++ RI+ PV+D + +++G+VS+ DL+ + S S
Sbjct: 12 DIMTPK--VVSVGPDAEVREIAQLLLKHRISAVPVVDSERRVIGIVSEGDLMRRVKSDSD 69
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
G +S + + + K + K++G+ ++MTP P+ V E T L AR+L +
Sbjct: 70 HG---HSWWLSLFTGGKDAGD----YVKSHGRKAHEVMTPNPMTVEENTPLHTIARMLEK 122
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRA 232
+R+PV+ DGKLVGI++R N+++
Sbjct: 123 HHIKRVPVL-RDGKLVGIVSRANLLQG 148
>gi|386401293|ref|ZP_10086071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385741919|gb|EIG62115.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 242
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K+ ++ +G+ V ++MT +PV + E T L + L+ +RLPV+ D
Sbjct: 73 LGSGKSASD----FVHEHGRKVSEVMTRSPVTLTEDTALAEIVDLMERNNVKRLPVIRGD 128
Query: 218 GKLVGIITRGNVVRA 232
K+VGI++R N+++A
Sbjct: 129 -KIVGIVSRANLLQA 142
>gi|402571975|ref|YP_006621318.1| hypothetical protein Desmer_1454 [Desulfosporosinus meridiei DSM
13257]
gi|402253172|gb|AFQ43447.1| CBS-domain-containing membrane protein [Desulfosporosinus meridiei
DSM 13257]
Length = 149
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 17/153 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + ++ + E +IL + +I+G PV+D + KLVG+VS+ DLL
Sbjct: 3 VKDVMQT--NVITIRTDMEIKEVAKILYDHQISGAPVVDSEGKLVGIVSEGDLLH----- 55
Query: 145 GSGRADNSMFPEVDST------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ N P V ++ + Q L K ++MT V + + ++E+
Sbjct: 56 ---KETNPQIPGVVGILGALIYYRGVRQYQSDLKKLIALQASEIMTSQVVKINKEASIEE 112
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
AA L++ K +RLPV++ DGK+VGIITR ++++
Sbjct: 113 AASLMVSKKIKRLPVIE-DGKIVGIITRMDIIK 144
>gi|409437045|ref|ZP_11264193.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408751277|emb|CCM75349.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 240
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
+ TV EA E ++ RI+G PV+DDD LVG++++ D L ++ + R + + + S
Sbjct: 17 SCTVLEAAETMLTNRISGLPVVDDDGVLVGMITEGDFLRRHELN-TERQRSWLQSWLASP 75
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
K +E +++G+ V ++M VVV L DA RL+ +RLPV+ +DG+L
Sbjct: 76 GKIADE----YVRSHGRRVDEVMNARVVVVSPDAALSDAVRLMERNDIKRLPVI-SDGRL 130
Query: 221 VGIITRGNVVRA 232
VG+I+R +++RA
Sbjct: 131 VGLISRSDLLRA 142
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V + MT +P+ + + + +AA +L + LPVVD DG LVG+IT G+ +R
Sbjct: 2 IVENAMTSSPITIGASCTVLEAAETMLTNRISGLPVVDDDGVLVGMITEGDFLR 55
>gi|167584761|ref|ZP_02377149.1| hypothetical protein BuboB_05471 [Burkholderia ubonensis Bu]
Length = 230
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ +A + V+ I+G PV+D ++VG+VS DLL RA+N
Sbjct: 16 PDMTIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLLH--------RAENGTGHGKRP 67
Query: 160 TWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
W F E K +G++VGD+M+ + + E L+ A L+ +R+PV+
Sbjct: 68 WWLEFLLSSPREQAARYVKEHGRLVGDVMSNQVISISEDMPLDQIADLMERRHLKRVPVL 127
Query: 215 DADGKLVGIITRGNVVRAALQI 236
+GKLVGI++R N++RA I
Sbjct: 128 -TEGKLVGIVSRSNLIRALASI 148
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+MTP+ V + DAARL ++ +PVVDA G++VGI+++G+++ A
Sbjct: 5 DIMTPSVVTATPDMTIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLLHRA 57
>gi|91783939|ref|YP_559145.1| hypothetical protein Bxe_A1873 [Burkholderia xenovorans LB400]
gi|91687893|gb|ABE31093.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 229
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV E I V+ I+G PV+D + + G++S+ DLL I R +S
Sbjct: 14 VTPDMTVREVARIFVDNGISGAPVLDPEGHIAGMISEGDLLRRTEIGTDERKPSSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W +E + + KT+ V D+MTP V V+ T L + A +L + +R+PV A
Sbjct: 71 -DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVTQA- 127
Query: 218 GKLVGIITRGNVVRA 232
G++VGI++R N+V+A
Sbjct: 128 GRVVGIVSRANLVQA 142
>gi|336172298|ref|YP_004579436.1| hypothetical protein [Lacinutrix sp. 5H-3-7-4]
gi|334726870|gb|AEH01008.1| CBS domain containing membrane protein [Lacinutrix sp. 5H-3-7-4]
Length = 157
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 26/158 (16%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V DFM+ EL K T +V+E + L++ +I+G PV+++ +L+G++S+ D +
Sbjct: 24 FKVSDFMS--RELITFKATQSVEEVVSALIKHKISGGPVVNERNELIGIISEGD--CIKQ 79
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
IS S + M E DS K MV ++ T + N+ DAA+
Sbjct: 80 ISDSRYYNMPM--ENDSIEK--------------HMVTNVET-----IDGNLNVFDAAKQ 118
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
L++K RR P+V+ DGKLVG I++ ++++AA+Q+K
Sbjct: 119 FLDSKRRRFPIVE-DGKLVGQISQKDILKAAMQLKQQN 155
>gi|169830475|ref|YP_001716457.1| hypothetical protein Daud_0264 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637319|gb|ACA58825.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 153
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 84/151 (55%), Gaps = 10/151 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ E+ V P V++ ++L+E I+G PV+D+ KLVG+V++ DL+ +
Sbjct: 8 DIMTS--EVITVHPEDDVEKVAQLLLEHHISGLPVVDEGGKLVGVVTEGDLVFREK---- 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ ++ V + + ++ + +T + VGDLM+ V +ED A ++
Sbjct: 62 -KVRAPLYVMVFDSLIYLEKPKRFIEEIRRTVAQKVGDLMSTKLYTVGPEAPIEDVATII 120
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
++ R+PVVDA+ +L+GII+R +++RA
Sbjct: 121 VDRGINRVPVVDAENRLLGIISRQDIIRATF 151
>gi|85716122|ref|ZP_01047098.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
gi|85697121|gb|EAQ35003.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
Length = 242
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 16/140 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV +A ++ + I+G PV++ + K+VG++S+ D + I R
Sbjct: 14 VHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRAEIGTQRRR-------- 65
Query: 158 DSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ W F + + + G+ VG++MTP P V E +LED ++ + + +RLP
Sbjct: 66 -ARWLAFLLGAGRDASDFVHE-QGRKVGEIMTPDPYTVSEDASLEDIVTMMEQKRVKRLP 123
Query: 213 VVDADGKLVGIITRGNVVRA 232
V+ D ++VGI+TR N+++A
Sbjct: 124 VMRND-QIVGIVTRSNLLQA 142
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+MT + V T + DAA +L LPVV+A+GK+VGII+ G+ +R A E
Sbjct: 6 IMTRRVITVHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRA-------E 58
Query: 242 MGAQ 245
+G Q
Sbjct: 59 IGTQ 62
>gi|373857726|ref|ZP_09600466.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
gi|372452397|gb|EHP25868.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
Length = 158
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM + + KP+TTV E + IL RI G PV+DD LVG+VSD D++
Sbjct: 3 VRDFMIRR--IFTAKPSTTVKELISILETNRIGGVPVVDDKGNLVGIVSDGDIVRF---- 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLEDAARLL 203
S + S + +++ +L K + D+M + + + E A RL+
Sbjct: 57 LSPNKEKIYLAYYISYIEEAQKIEDVLRKRLNTPIEDIMVKKNIKTLAPDDDFESAIRLI 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVR 231
++++PVV+ G++VGII+RG+++
Sbjct: 117 SRHHFKKIPVVNGAGRVVGIISRGDIIH 144
>gi|289192110|ref|YP_003458051.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288938560|gb|ADC69315.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 154
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 79/136 (58%), Gaps = 9/136 (6%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE----VDSTW 161
+ +++ E +I+G PV++ D KLVG++S+ D++ +I N + P ++
Sbjct: 21 DVIKLFRENKISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLILPSPLDLIELPL 78
Query: 162 KTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+T ++++ + + V D+MT +V + + DAA+L++E +RLPVVD +G
Sbjct: 79 RTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVENNIKRLPVVDDEG 138
Query: 219 KLVGIITRGNVVRAAL 234
L+GI+TRG+++ A +
Sbjct: 139 NLIGIVTRGDLIEALI 154
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
++ D+M P+VV E +L D +L E K PV++ DGKLVGII+ ++V+
Sbjct: 2 LIKDIMK-KPIVVYEDDDLIDVIKLFRENKISGAPVLNKDGKLVGIISESDIVK 54
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT K + V KP T+++A +++VE I PV+DD+ L+G+V+ DL+
Sbjct: 99 VRDVMTRK--VIVAKPDMTINDAAKLMVENNIKRLPVVDDEGNLIGIVTRGDLI 150
>gi|186470680|ref|YP_001861998.1| hypothetical protein Bphy_5888 [Burkholderia phymatum STM815]
gi|184196989|gb|ACC74952.1| CBS domain containing membrane protein [Burkholderia phymatum
STM815]
Length = 242
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 71 LTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130
+T A + D MTT + P ++ +A + V+ RI+G PV+D + ++VG
Sbjct: 1 MTTRRAQAKGAIMRALDIMTTS--VVTATPDMSIHDAARLFVDNRISGMPVVDGEGQVVG 58
Query: 131 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
+VS DLL +G+G + +D + E K + +VGD+M + +
Sbjct: 59 IVSQGDLLHRVE-NGTGHGKRRWW--LDFLLSSPREQAARYVKEHAHVVGDVMCDRVISI 115
Query: 191 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
E L+ A L+ +R+PV+ DGKLVGI++R N++RA
Sbjct: 116 TEDMPLDRIADLMERRHLKRVPVL-KDGKLVGIVSRSNLIRA 156
>gi|302392835|ref|YP_003828655.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302204912|gb|ADL13590.1| CBS domain containing membrane protein [Acetohalobium arabaticum
DSM 5501]
Length = 148
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 17/151 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E++ V T+ + +L + I+G PVI+DD ++VG++++ DL+
Sbjct: 5 DIMT--EDVITVNQDDTIKDVARLLSDNEISGLPVINDDGEVVGIITEQDLII------- 55
Query: 147 GRADNSMFPE----VDST--WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
R FP+ +DS ++ E ++ K G V ++MT + V + T ++
Sbjct: 56 -RDKKLHFPDYIYLLDSIIYLESLREFEEEFKKMIGTQVEEVMTEEVITVNQETPTDEIV 114
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
L+LE K R+PV+D +G+LVGII+RG++V+
Sbjct: 115 ELMLEHKINRVPVID-NGELVGIISRGDLVK 144
>gi|424918521|ref|ZP_18341885.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854697|gb|EJB07218.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 226
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 85/146 (58%), Gaps = 14/146 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + ++PT +V A+ ++++ ++G PV+DD ++ G++++ DLL I +
Sbjct: 5 DIMTTS--VVSIRPTVSVRHAVSVMMQANVSGLPVVDDGGRVCGMLTEGDLLLRREIRAT 62
Query: 147 GRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R+ + + E+D +++ + TNG V D+M+P +V + + D A L
Sbjct: 63 TRSSRAGEIISEID--------LERYIC-TNGWSVADVMSPDVIVATPDSEVSDIAESLQ 113
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVV 230
+ +RLP+V+ DG+LVGI++R +++
Sbjct: 114 AHRIKRLPIVE-DGRLVGIVSRRDIL 138
>gi|298206971|ref|YP_003715150.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
gi|83849605|gb|EAP87473.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
Length = 154
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 29/168 (17%)
Query: 76 AAPSSG---VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A P+ G TV D+M+ K L P+ V E ++ LV+ +I+G PV++D +LVG++
Sbjct: 11 AKPTKGSKEQITVSDYMSRK--LVTFTPSQNVMEVIQTLVKHKISGGPVVNDQNELVGII 68
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
S+ D + IS S R N P D+T V+K MV D+ T +
Sbjct: 69 SEGD--CIKQISDS-RYHN--LPMDDAT------VEK-------HMVRDVET-----IDG 105
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
N+ DAA L K RR P+V+ +GKLVG+I++ ++++AAL +K
Sbjct: 106 NMNIFDAANQFLSAKRRRFPIVE-EGKLVGLISQKDILKAALNLKQQN 152
>gi|357633591|ref|ZP_09131469.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357582145|gb|EHJ47478.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 218
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ V ++ +A I+ EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMST--DVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS--- 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P +T + E+ LLS+ + LMT PV +R + +E AA ++
Sbjct: 58 ----------PSSATTLDMY-EMTYLLSELK---IKGLMTRNPVSIRRSDTVERAALIMR 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K+ LPV+D GK+VGIIT ++ R + I + G Q
Sbjct: 104 DRKFGSLPVIDEAGKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+VGD M+ V E ++ A R++ E K RRLPVVD DG+LVGI++
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVS 49
>gi|288574950|ref|ZP_06393307.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570691|gb|EFC92248.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 158
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
+L V V +A+ +L ++G PVIDDDW+LVG +S+ D+L +
Sbjct: 13 DLTAVMSQDRVFDAIHVLYSHGLSGLPVIDDDWRLVGYLSESDIL---------KPTIPT 63
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
+ E+ + F + LL + G M V D M PV V T++ A ++L K++
Sbjct: 64 YLEILAQSTFFGNEENLLFQRFGAMKNDLVKDFMQKDPVFVFPDTSIMTVADMMLRKKFK 123
Query: 210 RLPVVDADGKLVGIITRG 227
RLPV + +GK +GII RG
Sbjct: 124 RLPVTE-EGKFIGIIDRG 140
>gi|152993377|ref|YP_001359098.1| inosine 5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
gi|151425238|dbj|BAF72741.1| inosine-5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
Length = 481
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P TV EA ++ E RI+G PV+D D KL+G++++ D+ +
Sbjct: 99 ISPDATVGEADALMGEYRISGVPVVDADKKLIGIITNRDMRFI----------------T 142
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
D + K V D MTPAP+V ++ T LE+AA++L + K +LP+VD
Sbjct: 143 DMSLK----------------VADTMTPAPLVTAKKGTTLEEAAKVLQKHKIEKLPIVDD 186
Query: 217 DGKLVGIIT 225
DGKL G+IT
Sbjct: 187 DGKLNGLIT 195
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
K TT++EA ++L + +I P++DDD KL GL++ D+
Sbjct: 161 KKGTTLEEAAKVLQKHKIEKLPIVDDDGKLNGLITIKDI 199
>gi|218128450|ref|ZP_03457254.1| hypothetical protein BACEGG_00018 [Bacteroides eggerthii DSM 20697]
gi|317475724|ref|ZP_07934983.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
1_2_48FAA]
gi|217989341|gb|EEC55654.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii DSM
20697]
gi|316908107|gb|EFV29802.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
1_2_48FAA]
Length = 491
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 33/136 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K ++V +AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 104 IKRGSSVADALGLMAEYKIGGIPVVDDEGHLVGIVTNRDLR------------------- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
K + K + ++MT + +V +TT+LE AA++L E K +LPVVD
Sbjct: 145 -------------FEKDHNKRIDEVMTKSNIVTTNQTTDLEAAAQILQEHKIEKLPVVDK 191
Query: 217 DGKLVGIITRGNVVRA 232
D KLVG+IT ++ +A
Sbjct: 192 DNKLVGLITYKDITKA 207
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TK + TT ++ A +IL E +I PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKSNIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDI 204
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
M PV ++ +++ DA L+ E K +PVVD +G LVGI+T
Sbjct: 97 MIYDPVTIKRGSSVADALGLMAEYKIGGIPVVDDEGHLVGIVT 139
>gi|86360152|ref|YP_472041.1| hypothetical protein RHE_PC00107 [Rhizobium etli CFN 42]
gi|86284254|gb|ABC93314.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 240
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V + +V EA ++++ RI+G PV+ + LVG+VS+ D L +S + R + + +
Sbjct: 14 VTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLRRSELS-TERKRSWLLEWL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S+ + E +T+G+ V ++MT + T +L DA RL+ + +RLPVV+
Sbjct: 73 TSSGRIAAE----YVRTHGRRVEEVMTAPVSAIAPTASLSDAVRLMERQEIKRLPVVEG- 127
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGA 244
G+LVGI+ R +++RA Q AT A
Sbjct: 128 GRLVGIVARSDLLRALSQALPATSTSA 154
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V +MT + V + ++ +AARL+L+ + LPVV A+G LVGI++ G+ +R
Sbjct: 2 LVQAIMTSPAITVTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLR 55
>gi|302339945|ref|YP_003805151.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
gi|301637130|gb|ADK82557.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
Length = 413
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E+ P +V E ++ LV++ + PV D +VG+V+ DL+ +
Sbjct: 118 VRDVMT--EQPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMKHGGMP 175
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+++ E STW + K+N + + ++MTP P + + +A L++
Sbjct: 176 IRLGLLSTLPKEERSTW---------MEKSNNRNLSEIMTPHPQTINADQKVSEALHLMV 226
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVR---AALQIKHAT 240
+RLPVVD +GKL GI+ R +++R + +Q H T
Sbjct: 227 RKALKRLPVVDGNGKLCGILARIDLLRLLSSKVQTAHET 265
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
EA++IL +K VID D LVGLV+D L+ + +D T
Sbjct: 297 EAIDILAQKAAQRAAVIDTDKHLVGLVTDSILMRV----------------IDKKTSTIL 340
Query: 166 EVQKLLSKTNGKM-VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
+++ ++ + + +M V V E T++++A RL+ E +R+PVVDA+GK G+I
Sbjct: 341 PLRRFAARRAESLQLSQVMKREVVRVTEETSVDEAIRLMTEQGLKRIPVVDAEGKFCGMI 400
Query: 225 TRGNVVRA 232
R +++ A
Sbjct: 401 RRDSILIA 408
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V EAL ++V K + PV+D + KL G+++ DLL L S S A + P
Sbjct: 218 VSEALHLMVRKALKRLPVVDGNGKLCGILARIDLLRLLS-SKVQTAHETSGPSTGG---- 272
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
N++Q +V D++ + + L +A +L + +R V+D D LVG+
Sbjct: 273 -NQLQ---------LVRDVVLRDRLALPSHMPLREAIDILAQKAAQRAAVIDTDKHLVGL 322
Query: 224 ITRGNVVR 231
+T ++R
Sbjct: 323 VTDSILMR 330
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT PV ++ + + L++ + LPV D G +VG++T+G++++
Sbjct: 117 LVRDVMTEQPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMK 170
>gi|308274761|emb|CBX31360.1| hypothetical protein N47_E48720 [uncultured Desulfobacterium sp.]
Length = 170
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T ++ V P T V +A +IL+E I G PV+D + KL G++ D+++
Sbjct: 21 VKDIMKT--DVITVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILCQSDIIS----Q 74
Query: 145 GSGRADNSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S+F +D + + ++K + K V M+ PV V+ T++E A L
Sbjct: 75 QKKFPVPSLFAFLDGFISIPSMKHIEKEVQKIAAVTVEHAMSVNPVTVKSDTSIEAVAAL 134
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+++ + LPVVD DGKL+GI+ + +++R +
Sbjct: 135 MVDNNFHTLPVVD-DGKLIGIVGKEDILRTLI 165
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+V D+M + V T + AA++LLE +PVVD +GKL GI+ + +++
Sbjct: 20 IVKDIMKTDVITVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILCQSDII 72
>gi|375011247|ref|YP_004988235.1| hypothetical protein [Owenweeksia hongkongensis DSM 17368]
gi|359347171|gb|AEV31590.1| CBS domain-containing protein [Owenweeksia hongkongensis DSM 17368]
Length = 151
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 28/173 (16%)
Query: 70 TLTANSAAPS--SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
+ A P S V DFMTTK + + T+ + ++IL+EKRI+G PV+D D
Sbjct: 4 SFQGQQAKPQTESQQVVVRDFMTTK--ITTFQVDQTMHDVIQILIEKRISGGPVVDVDNH 61
Query: 128 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 187
LVG++S+ D L ++ G K N S + G V + M
Sbjct: 62 LVGVISEGDCLK-QAVKG----------------KYLN------SPSLGATVSECMVTEV 98
Query: 188 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
V N+ DAA++ L + RR PVV+ +GKL+G I++ ++++A +K T
Sbjct: 99 KTVSPNLNILDAAQMFLHLRLRRFPVVE-EGKLLGQISQKDIMKAIHNLKETT 150
>gi|296132180|ref|YP_003639427.1| hypothetical protein TherJR_0656 [Thermincola potens JR]
gi|296030758|gb|ADG81526.1| CBS domain containing membrane protein [Thermincola potens JR]
Length = 150
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 13/150 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA----LDS 142
D MT +E+ +P TV E +IL +K+I+G PV+D+ K+VG+V++ DLL L
Sbjct: 5 DIMT--KEVITARPEQTVREVAKILADKKISGVPVVDEAGKIVGIVTEADLLVQTQKLKV 62
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S ++ + E ++ L K V D+MT V V E +ED A
Sbjct: 63 PSYVQLLGGIIY------LDSVKEFEEDLRKAVAVQVKDIMTTDVVTVEEDAEIEDIATT 116
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ + RLPVV DG LVGI++R ++V+A
Sbjct: 117 MADEGINRLPVV-RDGALVGIVSRADIVKA 145
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
D+MT + R + + A++L + K +PVVD GK+VGI+T +++ ++K
Sbjct: 5 DIMTKEVITARPEQTVREVAKILADKKISGVPVVDEAGKIVGIVTEADLLVQTQKLK 61
>gi|212690533|ref|ZP_03298661.1| hypothetical protein BACDOR_00015 [Bacteroides dorei DSM 17855]
gi|237708011|ref|ZP_04538492.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265754203|ref|ZP_06089392.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|345515918|ref|ZP_08795415.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
5_1_36/D4]
gi|423229920|ref|ZP_17216325.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T00C15]
gi|423241573|ref|ZP_17222685.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL03T12C01]
gi|423247010|ref|ZP_17228061.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T12C06]
gi|212666882|gb|EEB27454.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei DSM
17855]
gi|229436549|gb|EEO46626.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
5_1_36/D4]
gi|229457997|gb|EEO63718.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263234912|gb|EEZ20467.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392632711|gb|EIY26669.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T00C15]
gi|392633771|gb|EIY27709.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T12C06]
gi|392641159|gb|EIY34944.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL03T12C01]
Length = 491
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL----------RFEKDMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T++E A+++L E K +LPVVD D
Sbjct: 154 D----------EVMTKEN-----------IVTTNQSTDMEAASQILQEHKIEKLPVVDKD 192
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 193 GKLVGLITYKDITKA 207
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +T ++ A +IL E +I PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIVTTNQSTDMEAASQILQEHKIEKLPVVDKDGKLVGLITYKDI 204
>gi|150020570|ref|YP_001305924.1| signal transduction protein [Thermosipho melanesiensis BI429]
gi|149793091|gb|ABR30539.1| putative signal transduction protein with CBS domains [Thermosipho
melanesiensis BI429]
Length = 147
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 10/130 (7%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMFPEVDST 160
+V L+IL + ITG PV+++D+K+VG +S+ D++ AL S S S P+
Sbjct: 19 SVSRVLKILSRQEITGVPVVNEDYKVVGFISENDIIRAALPS-YFSLLQTASFIPD---- 73
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
N+ + L K + K V ++MT +V++E T L AA L++ + LPVVD +L
Sbjct: 74 ---LNQFVRSLKKISNKSVSEIMTKPAIVIKEDTPLLHAADLMIRHSLKILPVVDDGERL 130
Query: 221 VGIITRGNVV 230
VG+ITR ++
Sbjct: 131 VGVITRMRIL 140
>gi|92117451|ref|YP_577180.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800345|gb|ABE62720.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 242
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 16/140 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT+ +A ++++ I+G PVI+ KLVG++S+ D + I R
Sbjct: 14 VNPDTTIVDAANTMLKQHISGLPVINAAGKLVGIISEGDFIRRAEIGTQRRR-------- 65
Query: 158 DSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ W F + + + G+ VG++MTP P V E T LED + + +RLP
Sbjct: 66 -ARWLKFLLGAGRDASDFVHE-QGRKVGEIMTPNPCTVSEDTLLEDIVTTMEKNSIKRLP 123
Query: 213 VVDADGKLVGIITRGNVVRA 232
V+ D ++VGI+TR N+++A
Sbjct: 124 VMRGD-QIVGIVTRANLLQA 142
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+MT V T + DAA +L+ LPV++A GKLVGII+ G+ +R A E
Sbjct: 6 IMTRQVTTVNPDTTIVDAANTMLKQHISGLPVINAAGKLVGIISEGDFIRRA-------E 58
Query: 242 MGAQ 245
+G Q
Sbjct: 59 IGTQ 62
>gi|295136416|ref|YP_003587092.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
gi|294984431|gb|ADF54896.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
Length = 155
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 29/171 (16%)
Query: 70 TLTANSAAP---SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW 126
+ AAP S V D+MT+ L K V E +E L++ +I+G PV++D +
Sbjct: 5 SFQGRRAAPVKIESAPIMVEDYMTS--SLITFKRDQYVAEVMEALLKNKISGAPVVNDRY 62
Query: 127 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 186
+LVG++SD D + K +E + + + M+
Sbjct: 63 ELVGIISDADCM-----------------------KQISESRYFNMPIGDMKIENYMSTD 99
Query: 187 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
V+ + ++ D A+L YRR PVV+ +GKL+G+I+R +++ AAL+++
Sbjct: 100 VAVIHKNLSIFDCAQLFYNNSYRRFPVVE-NGKLIGMISRKDILCAALKLR 149
>gi|294775656|ref|ZP_06741164.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|319642193|ref|ZP_07996853.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345518194|ref|ZP_08797649.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423314878|ref|ZP_17292810.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
gi|254836462|gb|EET16771.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294450500|gb|EFG18992.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|317386179|gb|EFV67098.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392681060|gb|EIY74422.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
Length = 491
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL----------RFEKDMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T++E A+R+L E K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------IVTTNQSTDMEAASRILQEHKIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 193 GKLVGLITYKDITKA 207
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +T ++ A IL E +I PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDI 204
>gi|187920973|ref|YP_001890005.1| signal transduction protein [Burkholderia phytofirmans PsJN]
gi|187719411|gb|ACD20634.1| putative signal transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 229
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV E I V+ I+G PV+D D + G++S+ DL I R S
Sbjct: 14 VTPEMTVREVARIFVDNGISGAPVLDRDGHVAGMISEGDLFRRAEIGTDERTRTSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W E + + KT+ V D+MT V V+ T L + A +L + +R+PV DA
Sbjct: 71 -DFWSASEEARDYI-KTHALKVRDVMTTDVVTVQPETQLGEVAGILETRRIKRVPVTDA- 127
Query: 218 GKLVGIITRGNVVRA 232
G+LVGI++R N+V+A
Sbjct: 128 GRLVGIVSRANLVQA 142
>gi|16262787|ref|NP_435580.1| hypothetical protein SMa0636 [Sinorhizobium meliloti 1021]
gi|14523419|gb|AAK64992.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 217
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 19/154 (12%)
Query: 89 MTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
MTTK VVK P +V +A +++ + ++G PV+DDD L+G++S+ DL+ L S
Sbjct: 1 MTTK----VVKLSPDDSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSE 56
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ AD ++ P+ + + + + + VGD+MT PV + E L A L+
Sbjct: 57 ASVLMADMAIDPD--------DRANAFIRRCSWR-VGDVMTANPVTIEEEAPLARVAGLM 107
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
E +R+PVV DG+LVGI++R ++++A K
Sbjct: 108 QERGIKRIPVV-RDGELVGIVSRADLLQAIFSTK 140
>gi|338997445|ref|ZP_08636142.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
gi|338765623|gb|EGP20558.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
Length = 229
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P V + ++L+E RI+ P++DD+ +++G+VS+ DL+ + S + +
Sbjct: 14 VGPDANVRDIAQLLLEHRISAVPIVDDERRVLGIVSEGDLMR--RVKDEADDSRSWWLSL 71
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S K E K++G+ ++MT P+ V E L ARLL + +R+PVV D
Sbjct: 72 FSGGKDAGE----YVKSHGRKAHEVMTSKPLTVEENAPLHTIARLLEKHHIKRVPVV-RD 126
Query: 218 GKLVGIITRGNVVRA 232
GKLVGI++R N+++
Sbjct: 127 GKLVGIVSRANLLQG 141
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MTP V V N+ D A+LLLE + +P+VD + +++GI++ G+++R
Sbjct: 5 DIMTPNVVCVGPDANVRDIAQLLLEHRISAVPIVDDERRVLGIVSEGDLMR 55
>gi|150003021|ref|YP_001297765.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
8482]
gi|149931445|gb|ABR38143.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
8482]
Length = 482
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R + M +
Sbjct: 95 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL----------RFEKDMDKRI 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T++E A+R+L E K +LPVVD +
Sbjct: 145 D----------EVMTKEN-----------IVTTNQSTDMEAASRILQEHKIEKLPVVDKE 183
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 184 GKLVGLITYKDITKA 198
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +T ++ A IL E +I PV+D + KLVGL++ D+
Sbjct: 145 DEVMTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDI 195
>gi|189461625|ref|ZP_03010410.1| hypothetical protein BACCOP_02284 [Bacteroides coprocola DSM 17136]
gi|189431655|gb|EDV00640.1| inosine-5'-monophosphate dehydrogenase [Bacteroides coprocola DSM
17136]
Length = 491
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL----------RFEKDMTKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P T++E A+R+L E K +LPVV D
Sbjct: 154 D----------EVMTKEN------IVTTEP-----GTDMETASRILQENKIEKLPVVGKD 192
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 193 GKLVGLITYKDITKA 207
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +P T ++ A IL E +I PV+ D KLVGL++ D+
Sbjct: 154 DEVMTKENIVTTEPGTDMETASRILQENKIEKLPVVGKDGKLVGLITYKDI 204
>gi|315655202|ref|ZP_07908103.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
gi|315490457|gb|EFU80081.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
Length = 511
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 31/145 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 114 IGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------------- 158
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
+ W T K V D MTP P++ R + E+A +LL E + +LP++D
Sbjct: 159 -AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDE 204
Query: 217 DGKLVGIITRGNVVRAALQIKHATE 241
+GKL G+IT + V+ Q HAT+
Sbjct: 205 NGKLTGLITVKDFVKTE-QFPHATK 228
>gi|302867253|ref|YP_003835890.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|302570112|gb|ADL46314.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
Length = 234
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ V+ T E +++L E+ +T PV+D+ +++G+VS+ DL+
Sbjct: 4 WQVQDVMT--RDVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVE 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + + + P+ ++ +K + DLMT PV + + +AARL
Sbjct: 62 FLGQPQ-ERRILPD--------RHRREARAKAGATLAADLMTAPPVTITPDATIVEAARL 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLPVV+ G+LVGI+TRG++++ L+
Sbjct: 113 MDARGVKRLPVVNDLGRLVGIVTRGDLLKVHLR 145
>gi|347753627|ref|YP_004861192.1| CBS domain-containing membrane protein [Bacillus coagulans 36D1]
gi|347586145|gb|AEP02412.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
Length = 153
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM ++ VK TT+ E L++L RI G PV+D + KL+G++SD D++ +
Sbjct: 3 VKDFMI--RDVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMISDGDVIRF--LQ 58
Query: 145 GSGRADNSMFPE-VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R + V + + FNE KL+ + + + VR + E+A R+L
Sbjct: 59 PKARTVYDFYITIVVNEQEDFNE--KLVHSLDFPVEKIMKRRELYTVRPEDDFENALRIL 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVR 231
+ +++LPVV+ G++VG+I+RG+++R
Sbjct: 117 AKHHFKKLPVVNQAGRVVGVISRGDIMR 144
>gi|298346656|ref|YP_003719343.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315656882|ref|ZP_07909769.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236717|gb|ADI67849.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315492837|gb|EFU82441.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 511
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 31/145 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 114 IGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------------- 158
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
+ W T K V D MTP P++ R + E+A +LL E + +LP++D
Sbjct: 159 -AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDE 204
Query: 217 DGKLVGIITRGNVVRAALQIKHATE 241
+GKL G+IT + V+ Q HAT+
Sbjct: 205 NGKLTGLITVKDFVKTE-QFPHATK 228
>gi|222100404|ref|YP_002534972.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221572794|gb|ACM23606.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 215
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 20/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ +EAL+++ + +I V+ DD ++VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFNEALKLMKQNKIKRLIVMKDD-RIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK V ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NVW----ELHYLLSKLK---VEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
E LPVVD GKLVGIIT+ ++ + ++I
Sbjct: 103 ERDISGLPVVDDAGKLVGIITQTDIFKVFVEI 134
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MT P+ + T+ +A +L+ + K +RL +V D ++VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFNEALKLMKQNKIKRL-IVMKDDRIVGIVTEKDLLYAS 56
>gi|320160660|ref|YP_004173884.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
gi|319994513|dbj|BAJ63284.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
Length = 275
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 21/151 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++M+ EE+ VV+P T++ EA ++ KRI PV+++D +LVGLV+ DL++ D
Sbjct: 143 VAEYMS--EEVVVVEPDTSLLEAHRLMGTKRIRALPVLEED-RLVGLVTRTDLVSSDPSR 199
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R Q+L K + V +MT V V T L++AARLLL
Sbjct: 200 FISRKQ-----------------QELSLKILTQPVEGIMTRTLVTVSPQTTLKEAARLLL 242
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
E K LPVV+ + KLVGI+T ++ R +Q
Sbjct: 243 EKKIHSLPVVE-NSKLVGILTESDLFRMVVQ 272
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 21/142 (14%)
Query: 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154
++ V P T + +A +L ++I PV+ KLVG+V+ LL RAD
Sbjct: 14 VYTVTPETFIVDARRLLDVRKIRHLPVVSAG-KLVGIVTRRGLL---------RAD---L 60
Query: 155 PEV-DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
P V D TW+ ++ + + + D+MT P+ V T + AAR++LE K LPV
Sbjct: 61 PAVSDETWEIAFDL-------HHQTIRDIMTVNPITVFPNTPMPKAARVMLENKITGLPV 113
Query: 214 VDADGKLVGIITRGNVVRAALQ 235
++ +LVGI+T ++ R ++
Sbjct: 114 LNDQRELVGILTSSDIFRFIIE 135
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 31/147 (21%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T+ D MT V P T + +A +++E +ITG PV++D +LVG+++ D+
Sbjct: 78 TIRDIMTVNP--ITVFPNTPMPKAARVMLENKITGLPVLNDQRELVGILTSSDIFRF--- 132
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
E+++ L +V + M+ VVV T+L +A RL+
Sbjct: 133 -------------------IIEELEEPL------VVAEYMSEEVVVVEPDTSLLEAHRLM 167
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVV 230
+ R LPV++ D +LVG++TR ++V
Sbjct: 168 GTKRIRALPVLEED-RLVGLVTRTDLV 193
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+V + M+ V T + DA RLL K R LPVV A GKLVGI+TR ++RA L
Sbjct: 5 IVKNWMSSPVYTVTPETFIVDARRLLDVRKIRHLPVVSA-GKLVGIVTRRGLLRADL 60
>gi|304389635|ref|ZP_07371597.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327188|gb|EFL94424.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 511
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 31/145 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 114 IGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------------- 158
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
+ W T K V D MTP P++ R + E+A +LL E + +LP++D
Sbjct: 159 -AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDE 204
Query: 217 DGKLVGIITRGNVVRAALQIKHATE 241
+GKL G+IT + V+ Q HAT+
Sbjct: 205 NGKLTGLITVKDFVKTE-QFPHATK 228
>gi|453053892|gb|EMF01351.1| hypothetical protein H340_07121 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 209
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT + V+ T E + +L E IT PV+D D + VG+VS+ DLLA
Sbjct: 6 TVGDLMT--HSVVRVQRGTLFTEIVHVLHEHDITAVPVVDADDRPVGVVSEADLLA---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ R D S+ V + K LMT V R ++ +AAR +
Sbjct: 60 KAARRVDPSLPAAVRA-------------KHEATTAEGLMTSPAVCARPDWSVVEAARTM 106
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
E +RLPVVDA+G+LVG+++R +++R L+
Sbjct: 107 EERHVKRLPVVDAEGRLVGLVSRSDLLRVFLR 138
>gi|124023450|ref|YP_001017757.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
gi|123963736|gb|ABM78492.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
Length = 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+T L VV P T++ EA++++ + I+G PV++DD LVG +++ DL+ +S
Sbjct: 6 TVKDVMSTPV-LSVV-PATSLQEAVQLMTDHHISGLPVVNDDGTLVGELTEQDLMVRESG 63
Query: 144 SGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G V DLM E L A
Sbjct: 64 VDAGPYVLLLDSVIYLRNPLNWD--KQVHQVL----GTSVNDLMRSDTHTCNEALPLPRA 117
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A +L + +RL V++ KLVG+ITRG+VVRA
Sbjct: 118 AAMLHDRSTQRLFVINDQRKLVGVITRGDVVRA 150
>gi|312137438|ref|YP_004004775.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311225157|gb|ADP78013.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 266
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 36/151 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K + V P T E +E++ + + GFPV DD KLVG+V+ +DL+
Sbjct: 7 VKDYMTRK--VICVTPETPTSELVELMKKTQHDGFPVTDD-GKLVGMVTSFDLI------ 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + K V ++M+ VV RE + DAAR++
Sbjct: 58 ---------------------------TNPSAKKVKEIMSTDVVVTRENMTIHDAARVMF 90
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
RLPVV+ +GK+VGIIT +++R+ ++
Sbjct: 91 REGVSRLPVVNGEGKVVGIITNTDIIRSHIE 121
>gi|242279465|ref|YP_002991594.1| hypothetical protein Desal_1995 [Desulfovibrio salexigens DSM 2638]
gi|242122359|gb|ACS80055.1| CBS domain containing membrane protein [Desulfovibrio salexigens
DSM 2638]
Length = 149
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 82/137 (59%), Gaps = 9/137 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPE 156
++P T V A ++++EK + G PV+D KL+G++ DL+A +IS S+F
Sbjct: 15 LEPDTDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLVAQQKTISMP-----SLFTI 69
Query: 157 VDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+D ++ + +++K ++K V MTP P+ + T++E A L++E K+ LPVV
Sbjct: 70 LDGFISFSSNEDLEKEVNKIAATKVEHAMTPDPITIEPDTSIEKIADLMVERKFYTLPVV 129
Query: 215 DADGKLVGIITRGNVVR 231
+ +GKLVG++ + +V++
Sbjct: 130 E-NGKLVGVVGKEDVLK 145
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
D+MT + + T++ AA+L+LE LPVVD GKL+G++ + ++V
Sbjct: 6 DIMTSGALTLEPDTDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLV 55
>gi|302867905|ref|YP_003836542.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315505690|ref|YP_004084577.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|302570764|gb|ADL46966.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315412309|gb|ADU10426.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 232
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 11/153 (7%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ V T E +++LV +RI+G PV+D +++G++S+ DLL
Sbjct: 4 WQVTDVMT--RDVATVTEETPYREVVDVLVRQRISGVPVVDSFRRVLGVISEADLLH--K 59
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ SG D E + L+++ DLMT V E +L ARL
Sbjct: 60 VERSGHPDERRVFEGRRRRTAREKAGALVAR-------DLMTAPAVTTHERASLAATARL 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLPV+D G+L GI+TRG+++R L+
Sbjct: 113 MDHEAVKRLPVLDDLGRLAGIVTRGDLLRVHLR 145
>gi|421587439|ref|ZP_16032841.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
gi|403708085|gb|EJZ22890.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
Length = 257
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V +V EA +++++ RI+G PV+D + LVG+VS+ D L ++ + R + +
Sbjct: 31 VPTCCSVAEAAQLMLDNRISGLPVVDTNGALVGIVSEGDFLRRSELN-TQRNRPWLLDWL 89
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S K E +T+G+ V ++MT + T ++ DA RL+ +RLPVV+ +
Sbjct: 90 TSPGKIATE----YVRTHGRRVDEVMTSPVSAIAPTASVSDAVRLMERYDIKRLPVVE-N 144
Query: 218 GKLVGIITRGNVVRA 232
GKLVGII R +++RA
Sbjct: 145 GKLVGIIARSDLLRA 159
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
+ + L+ + +V +MT + V ++ +AA+L+L+ + LPVVD +G LV
Sbjct: 3 RAHRRYEACLTMESKMLVQAIMTLPVITVPTCCSVAEAAQLMLDNRISGLPVVDTNGALV 62
Query: 222 GIITRGNVVR 231
GI++ G+ +R
Sbjct: 63 GIVSEGDFLR 72
>gi|408381781|ref|ZP_11179329.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
gi|407815712|gb|EKF86282.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
Length = 157
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-T 163
L E +I+G PV++ + +LVG++S+ D++ L I + P E+ K
Sbjct: 27 LRENKISGAPVMNKEDQLVGIISEGDIMRLLEIHSPHI--RLILPSPLDLIELPVRMKYE 84
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
+E+ + ++K ++G++MT V + +++ DAA+L+ +RLPVVD+DGK+VGI
Sbjct: 85 MDEIAEDMNKAASVLIGEIMTKKVVTIDPDSDISDAAQLMDTHDVKRLPVVDSDGKMVGI 144
Query: 224 ITRGNVVRAALQ 235
ITRG+++ A ++
Sbjct: 145 ITRGDIIGAMVR 156
>gi|27379757|ref|NP_771286.1| hypothetical protein blr4646 [Bradyrhizobium japonicum USDA 110]
gi|27352910|dbj|BAC49911.1| blr4646 [Bradyrhizobium japonicum USDA 110]
Length = 228
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV + +IL+E+RI+ PV+D D K++G+VS+ DLL + SG+ R+
Sbjct: 14 VGPNATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLLH-RAESGTERSP------- 65
Query: 158 DSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
S W L+ K++ V D+MT T L + A LL E + +R+P+
Sbjct: 66 -SWWLRLLTGDAQLATDYVKSHSIKVQDVMTQEVATAAPETPLHEIAMLLEERQIKRVPI 124
Query: 214 VDADGKLVGIITRGNVVR 231
V+ +G+LVGI++R N+++
Sbjct: 125 VNKEGQLVGIVSRANLLQ 142
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+M V V + A++LLE + +PVVDAD K++GI++ G+++ A
Sbjct: 5 DVMVSPVVTVGPNATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLLHRA 57
>gi|145351771|ref|XP_001420237.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580471|gb|ABO98530.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 133
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR--ADNSMFP 155
V+P +V EA+++LV+ RI+ PV++ +++G+VS+YDL+A + + AD+ MFP
Sbjct: 12 VRPDESVFEAMKLLVDNRISAVPVVNASGEVLGVVSEYDLMARVGKKETTKSVADDGMFP 71
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ + K +G V M A + L +A L+L R+PVVD
Sbjct: 72 -------------RRMYKASGSKVSTAMHEATTCTPDMP-LVEATELMLNGNLARMPVVD 117
Query: 216 ADGKLVGIITRGNVVR 231
G LVGI++RG+++R
Sbjct: 118 DRGALVGILSRGDIMR 133
>gi|386393723|ref|ZP_10078504.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
gi|385734601|gb|EIG54799.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
Length = 218
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ V ++ +A I+ EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMST--DVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS--- 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P +T + E+ LLS+ + +MT P+ +R + +E AA ++
Sbjct: 58 ----------PSSATTLDMY-EMTYLLSEMK---IKGIMTKNPLSIRRSDTVERAALIMR 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K+ LPVVD GK+VGIIT ++ R + I + G Q
Sbjct: 104 DRKFGSLPVVDEAGKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+VGD M+ V E ++ A R++ E K RRLPVVD DG+LVGI++
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVS 49
>gi|344340335|ref|ZP_08771261.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343799993|gb|EGV17941.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 154
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-----ALDSISGSGRADNS 152
V P T + E ++ R G PV+D D KLVG++++ DLL LD + G
Sbjct: 14 VNPDTRIVEVASLMCLYRFHGLPVVDGDEKLVGIIAERDLLHSLFPKLDKLIAEGMHS-- 71
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
++D ++E+ +L ++ +LMTP PV V ++ AA +++ +RR+P
Sbjct: 72 --VDLDKEMARYSEILELKTE-------ELMTPNPVTVDPEMHVLRAATVMVRHNFRRIP 122
Query: 213 VVDADGKLVGIITRGNVVRAALQ 235
V D G+LVG+++ G+V +A Q
Sbjct: 123 VAD-QGRLVGMLSIGDVHKAIFQ 144
>gi|453051718|gb|EME99217.1| hypothetical protein H340_17457 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALD 141
TV + MT + V+P T E ++ L E +T PV+D ++VG+VS+ DL+ + D
Sbjct: 6 TVDELMTRN--VVRVRPDTPFKEIVKELAENDVTAVPVVDQGGRVVGVVSEADLMRKSAD 63
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
GR PE W+ +K G +LM+ PV R N+ + AR
Sbjct: 64 QPDPFGRVPVP-NPE---AWER--------AKAEGARAEELMSAPPVCARPEWNVVETAR 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
L+ +RLPVVD +LVGII+R +V+R L+
Sbjct: 112 LMSAQNVKRLPVVDETDRLVGIISRADVLRVFLR 145
>gi|218297190|ref|ZP_03497852.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242467|gb|EED09006.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 150
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 15/156 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E +++P T++EA ++E R GFPV+D++ +L+GL+ +LL
Sbjct: 3 VADLMTRAPE--ILRPKATLEEAARKILETRYGGFPVVDEEGRLLGLLQVEELLP----- 55
Query: 145 GSGRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
R +N F +V++ W +Q++ + V +M V L A
Sbjct: 56 ---RPENVPFSDVEALQLFGEWVDEGTLQEIYRRYQSTPVEAVMLKEIPRVHPEDPLGKA 112
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++LL T+ R LPVVD + K+VGI+TR ++++ L+
Sbjct: 113 LQVLLTTEVRHLPVVDQEDKVVGILTRSDILKLILR 148
>gi|303247748|ref|ZP_07334017.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
gi|302490832|gb|EFL50731.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
Length = 218
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 23/163 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVD--EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
VGD+M+ +VV T V +A ++ E +I PV+D D KL+G+VS+ DL A
Sbjct: 3 VGDWMSR----NVVTATGDVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVSERDLKA--- 55
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
A S D+T E+ LLS+ V ++MT +P +R T +E AA +
Sbjct: 56 ------ASPS-----DATSLDMYELTYLLSEMK---VKNIMTKSPRFIRPTDTVERAALI 101
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ + K LPV+DADGK++GIIT ++ R + I + G Q
Sbjct: 102 MRDLKIGSLPVIDADGKVLGIITDTDIFRLFVSITGIDQDGIQ 144
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+VGD M+ V ++ A R++ E K RRLPVVD DGKL+GI++
Sbjct: 2 LVGDWMSRNVVTATGDVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVS 49
>gi|307565742|ref|ZP_07628211.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
21A-A]
gi|307345568|gb|EFN90936.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
21A-A]
Length = 494
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ +TV EAL I+ E I G PV+DDD LVG+V++ DL R + + +
Sbjct: 105 IRRGSTVQEALSIMAEYHIGGIPVVDDDNHLVGIVTNRDL----------RFERCLDKSI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D + N V + TNL +AA +L E K +LPVVD D
Sbjct: 155 DQVMTSEN---------------------LVTTHQKTNLSEAAEILQENKIEKLPVVDKD 193
Query: 218 GKLVGIITRGNVVRA 232
L+G+IT ++ +A
Sbjct: 194 NHLIGLITYKDITKA 208
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + T E L T + EA EIL E +I PV+D D L+GL++ D+
Sbjct: 155 DQVMTSENLVTTHQKTNLSEAAEILQENKIEKLPVVDKDNHLIGLITYKDI 205
>gi|408534336|emb|CCK32510.1| hypothetical protein BN159_8132 [Streptomyces davawensis JCM 4913]
Length = 243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG MTT E+ + T E +L E RI+G PV+D D +++G++S+ DLL + +
Sbjct: 6 VGSVMTT--EVVRAEYGTPFKEVARLLGEHRISGLPVVDQDEQVIGVISETDLLVRQAET 63
Query: 145 GSGRA--DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S F + +T +K + G LMT PV V + +AAR
Sbjct: 64 PDPYEPRKRSWFAGLTRQGRTRT------AKARARTAGGLMTEPPVTVHADDTIVEAART 117
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + + RLPV+D + +LVGI+TR ++++ L+
Sbjct: 118 MAQHRVERLPVLDEENRLVGIVTRRDLLKVFLR 150
>gi|295681015|ref|YP_003609589.1| signal transduction protein [Burkholderia sp. CCGE1002]
gi|295440910|gb|ADG20078.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ +A ++ V+ I+G PV+ + +++G+VS DLL +G+G + E+ S
Sbjct: 16 PEMTIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLLHRVE-NGTGHGKRRWWLELLS 74
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ + E K +G +VGD+M + + E L A L+ +R+PV+ DG+
Sbjct: 75 S--SAREQAARYVKEHGHVVGDVMCENVISIPEDMPLHQIADLMERRHLKRVPVL-KDGQ 131
Query: 220 LVGIITRGNVVRAALQIKHATEMGAQ 245
LVGI++R N++RA ++ + G+
Sbjct: 132 LVGIVSRSNLIRALAAVEPTIDTGSH 157
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MT + + + DAA+L ++ +PV+ A+G+++GI+++G+++
Sbjct: 5 DIMTSSVITATPEMTIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLLH 55
>gi|407710625|ref|YP_006794489.1| hypothetical protein BUPH_05583 [Burkholderia phenoliruptrix
BR3459a]
gi|407239308|gb|AFT89506.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P T+ +A + V+ I+G PV+D + K+VG+VS DLL
Sbjct: 5 DIMTTA--VVTATPDMTIYDAARLFVDNHISGMPVLDANGKVVGIVSQGDLLH------- 55
Query: 147 GRADNSMFPEVDSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
R +N W F E K +G VGD+M + + + L+ A
Sbjct: 56 -RVENGTRHGKRRWWLEFLLSSPREQAARYVKEHGHNVGDVMCTQVITIADDMPLDQVAD 114
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ +R+PV+ DGKLVGI++R N++RA
Sbjct: 115 LMERRHLKRVPVL-KDGKLVGIVSRSNLIRA 144
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MT A V + DAARL ++ +PV+DA+GK+VGI+++G+++ ++++ T
Sbjct: 5 DIMTTAVVTATPDMTIYDAARLFVDNHISGMPVLDANGKVVGIVSQGDLLH---RVENGT 61
Query: 241 EMGAQ 245
G +
Sbjct: 62 RHGKR 66
>gi|323529296|ref|YP_004231448.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407710136|ref|YP_006794000.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
gi|323386298|gb|ADX58388.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407238819|gb|AFT89017.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT K + V P T+ E + VE I+G PV+D D + G++S+ DLL I
Sbjct: 5 DVMTGK--VISVTPDMTIREVARLFVENHISGAPVLDSDGSVAGMISEGDLLRRSEIGTD 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R S W +E + + KT+ V D+MT V V T L + A +L
Sbjct: 63 ERKRTSWL----DFWSASHEARDYV-KTHAAKVSDVMTTNVVTVGPDTPLGEVAGVLETR 117
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+R+PV A G+LVGI++R N+V+A
Sbjct: 118 HIKRVPVTKA-GRLVGIVSRANLVQA 142
>gi|404450120|ref|ZP_11015106.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
gi|403764319|gb|EJZ25224.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
Length = 152
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T L P ++D L++L +++I+G PVI+ D KLVG++S+ D L I
Sbjct: 22 VKDHMST--NLVTFYPEDSIDHVLDMLTKRKISGAPVINHDKKLVGIISEVD--CLKEII 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
++ FP K M D++T +P +L DAA+ L
Sbjct: 78 KGKYSNTPSFP----------------GKVEEHMTKDVITLSP-----EMSLFDAAQKFL 116
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
E K RR PV+ DG+LVG I+ +++RA +++ T
Sbjct: 117 ELKIRRFPVL-KDGQLVGQISLSDIIRAFPKLRETT 151
>gi|255690566|ref|ZP_05414241.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
17565]
gi|423301600|ref|ZP_17279623.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii
CL09T03C10]
gi|260624027|gb|EEX46898.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
17565]
gi|408471593|gb|EKJ90124.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii
CL09T03C10]
Length = 492
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 34/137 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMTKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKEKLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADGKLVGIITRGNVVRA 232
DGKL+G++T ++ +A
Sbjct: 192 MDGKLIGLVTYKDITKA 208
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
M PV ++ + ++DA ++ E K +PVVD +G LVGI+T
Sbjct: 97 MIYDPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVT 139
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE+L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKEKLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|329957340|ref|ZP_08297860.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
12056]
gi|328523053|gb|EGF50156.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
12056]
Length = 491
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 33/136 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K ++V +AL+++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 104 IKRGSSVADALDLMSEYKIGGIPVVDDEGYLVGIVTNRDLR------------------- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
K K + ++MT +V +TT+LE AA++L E K +LPVVD
Sbjct: 145 -------------FEKDRSKRIDEVMTKKNIVTTNQTTDLEAAAQILQEYKIEKLPVVDK 191
Query: 217 DGKLVGIITRGNVVRA 232
D KLVG+IT ++ +A
Sbjct: 192 DNKLVGLITYKDITKA 207
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TK+ + TT ++ A +IL E +I PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKKNIVTTNQTTDLEAAAQILQEYKIEKLPVVDKDNKLVGLITYKDI 204
>gi|392410785|ref|YP_006447392.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
gi|390623921|gb|AFM25128.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
Length = 149
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT E+ V P T + E IL EKRI G PV+D+D ++G+V + DL+
Sbjct: 4 IADIMT--REVITVTPDTPIRELARILAEKRINGVPVVDEDGTVLGVVCESDLIE----Q 57
Query: 145 GSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G ++F +DS N +QK + V ++ + V V +++ +AA+L
Sbjct: 58 GRPLHIPTVFVILDSFIPLENPWRLQKEFKRITATKVEEIYSRPAVCVSPESDVSEAAKL 117
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ E KY +PV D +LVG++ + +V+R
Sbjct: 118 MSEKKYYTIPVCDDADRLVGVLGKVDVIRG 147
>gi|435853072|ref|YP_007314391.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
gi|433669483|gb|AGB40298.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
Length = 148
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 18/146 (12%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-------DSISG 145
E + V P + E +I++E I+G PVI+DD KLVG++S+ DL+ D I
Sbjct: 9 ENVITVGPKMKIKEVAQIMIENSISGLPVIEDD-KLVGIISEGDLIVKEKKLDLPDYIYV 67
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
G +F ++F++ ++ L K G V DLMT + V +++ D A + +E
Sbjct: 68 LG----GIF-----YLESFDDFEQDLKKMAGIEVADLMTKDVITVGPQSDVMDIATIFVE 118
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVR 231
R+PVV D KL+GI+TR +++R
Sbjct: 119 EGVNRVPVV-KDNKLLGIVTRADIIR 143
>gi|413962370|ref|ZP_11401598.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413931242|gb|EKS70529.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + P +V +A +V I+G PVID++ L+G+V++ DL+ I G
Sbjct: 6 ADIMTTS--IVSASPDMSVRQAAGTMVFAGISGMPVIDEEGNLLGIVTEGDLMHRAEI-G 62
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
+G + + E+ ++ + E+ K + + V D+MT V ET + D A LL
Sbjct: 63 TGVKQRAWWLELVASTR---ELASQYVKEHARKVSDVMTTDVATVSETCPVADIAELLER 119
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PV+ DGK+VG+++R N++RA
Sbjct: 120 KRIKRVPVLR-DGKVVGVVSRANLIRA 145
>gi|290955610|ref|YP_003486792.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
gi|260645136|emb|CBG68222.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
Length = 244
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 85 VGDFMTTKEELHVVKPT--TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
VG MTT VV+ T E +L RI+G PVIDDD K++G++S+ DL+ +
Sbjct: 6 VGSVMTTD----VVRAEYDTPFKEVARLLAGHRISGLPVIDDDEKVIGVISETDLMVRQA 61
Query: 143 ISGSGRAD-NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ FP T + K ++T G+ LMT PV V + +AAR
Sbjct: 62 RTPDPYGQPRHRFPFAVLTRAARRQAVKAEARTAGR----LMTEPPVTVHADDTIVEAAR 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + RLPVVD + +LVGI+ R ++++ L+
Sbjct: 118 TMARHRVERLPVVDEEERLVGIVCRRDLLQVFLR 151
>gi|209885943|ref|YP_002289800.1| transporter [Oligotropha carboxidovorans OM5]
gi|337740480|ref|YP_004632208.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386029497|ref|YP_005950272.1| hypothetical protein OCA4_c12510 [Oligotropha carboxidovorans OM4]
gi|209874139|gb|ACI93935.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
gi|336094565|gb|AEI02391.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336098144|gb|AEI05967.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 242
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V TT+ EA ++++ I+G PV+D KLVG++S+ D + I +
Sbjct: 14 VTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVRRVEIGTQTKR-------- 65
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W F G+ VG +M P PV + E TNLED RL+ + +RLPV
Sbjct: 66 -ARWLAFFIGPGRAATEFVHERGRKVGVVMNPQPVTITEDTNLEDIVRLMEKHNIKRLPV 124
Query: 214 VDADGKLVGIITRGNVVR 231
V D +L+G++TR +++R
Sbjct: 125 V-KDMQLLGMVTRTDLLR 141
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT PV V E T L +AA L+L+ LPVVD GKLVG+I+ G+ VR
Sbjct: 6 IMTRNPVSVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVR 55
>gi|89889989|ref|ZP_01201500.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
gi|89518262|gb|EAS20918.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
Length = 155
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 26/164 (15%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
+ + S+ + V DFMT K L P + +E L+++RITG PV+++ +LVG++S
Sbjct: 12 SQVSNSNQAFQVKDFMTRK--LVTFNPDQGITTVMETLLKQRITGGPVVNERKELVGIIS 69
Query: 134 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
D DL+ + G R N P D + V D M+ +
Sbjct: 70 DTDLM---HVIGDSRYHN--MPVGD------------------RKVSDYMSKQVDTIDAE 106
Query: 194 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
++ +AA L+T +RR PV + +GKL+G I+R +V+ AA Q+K
Sbjct: 107 ADIFEAATRFLKTGHRRFPVTE-NGKLIGQISRMDVIIAATQLK 149
>gi|456392178|gb|EMF57521.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TV D MT + V E + +L ++R++ PV+D + ++VG+VS+ DLL +
Sbjct: 6 HTVSDVMTYP--VAAVGREAGFKEIVRLLQDRRVSALPVLDGEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
DS + ++++L L+K G DLMT + R AA
Sbjct: 64 FR-------------DSDPDRYTQLRRLSDLAKAGGSTAADLMTSPALTTRPDATSAQAA 110
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
R++ + +RLPVV+ G L GI++R ++++ L+
Sbjct: 111 RIMAHARVKRLPVVNEQGMLEGIVSRADLLKVFLR 145
>gi|33862790|ref|NP_894350.1| IMP dehydrogenase [Prochlorococcus marinus str. MIT 9313]
gi|33634706|emb|CAE20692.1| similar to IMP dehydrogenase [Prochlorococcus marinus str. MIT
9313]
Length = 146
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG----RADNSM 153
V P T++ EA+++L + I+G PV++DD LVG +++ DL+ +S +G D+ +
Sbjct: 8 VVPATSLQEAVQLLSDHHISGLPVVNDDGTLVGELTEQDLMVRESGVDAGPYVLLLDSVI 67
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W +V ++L G V DLM E L AA +L + +RL V
Sbjct: 68 YLRNPLNWD--KQVHQVL----GTSVNDLMRSDTHTCNEALPLPRAAAMLHDRSTQRLFV 121
Query: 214 VDADGKLVGIITRGNVVRA 232
++ KLVG+ITRG+VVRA
Sbjct: 122 INDQRKLVGVITRGDVVRA 140
>gi|27381185|ref|NP_772714.1| hypothetical protein blr6074 [Bradyrhizobium japonicum USDA 110]
gi|27354352|dbj|BAC51339.1| blr6074 [Bradyrhizobium japonicum USDA 110]
Length = 242
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDDTGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT +PV + E T L + L+ +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRKVSEVMTASPVTITEDTALAEIVDLMERNNVKRLPVVRGD 128
Query: 218 GKLVGIITRGNVVRA 232
+VGI++R N+++A
Sbjct: 129 -MVVGIVSRANLLQA 142
>gi|284162397|ref|YP_003401020.1| hypothetical protein Arcpr_1296 [Archaeoglobus profundus DSM 5631]
gi|284012394|gb|ADB58347.1| CBS domain containing membrane protein [Archaeoglobus profundus DSM
5631]
Length = 259
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 37/156 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + + + P TV++A+ ++ E GFPV+D+D LVG VS DLL
Sbjct: 6 VKDYMT--KNVVTLSPENTVEDAIRLIEETGHDGFPVVDEDGMLVGYVSSIDLL------ 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ D T K + D+M V +E L+D AR++
Sbjct: 58 -----------KKDPTMK----------------IKDIMKKEVHVAKEYMPLKDVARVMF 90
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
T + +LPVVD G+LVGII+ +V+R+ QI+ AT
Sbjct: 91 RTGHSKLPVVDDRGRLVGIISNTDVIRS--QIERAT 124
>gi|167765435|ref|ZP_02437548.1| hypothetical protein BACSTE_03825 [Bacteroides stercoris ATCC
43183]
gi|167697063|gb|EDS13642.1| inosine-5'-monophosphate dehydrogenase [Bacteroides stercoris ATCC
43183]
Length = 491
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 33/136 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K ++V +AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 104 IKRGSSVADALGLMSEYKIGGIPVVDDEGHLVGIVTNRDLR------------------- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
K + K + ++MT +V +TT+LE AA++L E K +LPVVD
Sbjct: 145 -------------FEKDHNKRIDEVMTKDNIVTTNQTTDLEAAAQILQEHKIEKLPVVDK 191
Query: 217 DGKLVGIITRGNVVRA 232
D KLVG+IT ++ +A
Sbjct: 192 DNKLVGLITYKDITKA 207
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TK+ + TT ++ A +IL E +I PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKDNIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDI 204
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
M PV ++ +++ DA L+ E K +PVVD +G LVGI+T
Sbjct: 97 MIYDPVTIKRGSSVADALGLMSEYKIGGIPVVDDEGHLVGIVT 139
>gi|377820764|ref|YP_004977135.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935599|gb|AET89158.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 230
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + P TV +A + +V I+G PVI++ +LVG+V++ DLL I G
Sbjct: 4 ADIMTTS--VITADPEMTVRDAAKTMVLGHISGMPVINETGRLVGMVTEGDLLHRQEI-G 60
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
+G + + E+ S + E+ K + V D+M+ V V E + + A LL
Sbjct: 61 TGFKHRAWWLELLS---STRELASQYIKEHAGKVKDVMSTEVVTVDENCTVAELAELLER 117
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PV+ DGK+VG+I+R N++RA
Sbjct: 118 RRIKRVPVMR-DGKVVGLISRANLLRA 143
>gi|15669617|ref|NP_248430.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
jannaschii DSM 2661]
gi|2496178|sp|Q58821.1|Y1426_METJA RecName: Full=Uncharacterized protein MJ1426
gi|1592076|gb|AAB99437.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
jannaschii DSM 2661]
Length = 168
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 86 GDFMTTKEELH---VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
G+ M K+ + VV + + + + + +I+G PV++ D KLVG++S+ D++ +
Sbjct: 12 GEIMLIKDIMKKPIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVK--T 69
Query: 143 ISGSGRADNSMFPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTN 195
I N + P ++ KT ++++ + + V D+MT +V +
Sbjct: 70 IVTHNEDLNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMT 129
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ DAA+L+++ +RLPVVD +G L+GI+TRG+++ A +
Sbjct: 130 INDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLIEALI 168
>gi|376295146|ref|YP_005166376.1| hypothetical protein DND132_0355 [Desulfovibrio desulfuricans
ND132]
gi|323457707|gb|EGB13572.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 149
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT E + P T + A ++L+EK+I G PV+D D ++VG++ DL+A
Sbjct: 6 DIMTT--ECITLTPETDITAAAKVLLEKKINGAPVLDGD-QVVGVLCQSDLVA----QQK 58
Query: 147 GRADNSMFPEVDST--WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S F +D + +E+ + ++K VGD MT AP V T +ED A ++
Sbjct: 59 KVTLPSFFTLLDGVIPLSSHDELDREMTKIAALKVGDAMTAAPTFVTPETTIEDVATMMA 118
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
K LPV++ +GKLVG++ + +V++ ++
Sbjct: 119 NEKLYTLPVIE-NGKLVGVVGKEDVLKTLIK 148
>gi|71394085|gb|AAZ32124.1| CBS domain protein [uncultured euryarchaeote Alv-FOS5]
Length = 156
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 11/155 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT +++ V + + ++I+ +++I+G PV+++ KL+G+V+D D++ +LD
Sbjct: 4 VKDVMT--KDVVYVHDNEGIAKVIDIMKKRKISGLPVVNNSGKLIGVVTDGDIIRSLDIP 61
Query: 144 SGSGRADNSMFPEVDSTWKTFN------EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
A + P D + +V++ L V D+MT P V ++E
Sbjct: 62 DFPTSAVSP--PPFDFIERLIKVKMEEWDVERALEMWKSGKVSDVMTKDPASVHMNDDVE 119
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
AA ++LE RLPVVD DGKLVGI+TR ++++A
Sbjct: 120 KAADIMLEKNVHRLPVVDDDGKLVGIVTRLDLLKA 154
>gi|383786593|ref|YP_005471162.1| putative contains C-terminal CBS domains [Fervidobacterium
pennivorans DSM 9078]
gi|383109440|gb|AFG35043.1| putative transcriptional regulator, contains C-terminal CBS domains
[Fervidobacterium pennivorans DSM 9078]
Length = 313
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 36/160 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V +FMT +++ VKP TV + EIL KRI+G PV+DD+ +VG++S D+
Sbjct: 17 SVKEFMT--KDVIYVKPDRTVAQVKEILRLKRISGVPVVDDNNIVVGIISIEDI------ 68
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ L + T + V + MT V + E L+D +
Sbjct: 69 -----------------------IKCLENGTLNESVNEHMTKNVVCLSEDATLQDVIKHF 105
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+Y R PVVDA GKLVGI+T+ +++ A AT +G
Sbjct: 106 ERYRYGRFPVVDAQGKLVGIVTKNDILAAV-----ATRLG 140
>gi|289774171|ref|ZP_06533549.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289704370|gb|EFD71799.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 228
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V P + + +L + +++ PV++ + +++GLVS+ DLL +
Sbjct: 7 TVNDVMT--HTAVAVGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEF 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
DS F ++++L L+K G D+MT V V L AAR
Sbjct: 65 R-------------DSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAAR 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
++ + K +RLPVV+A+G L G+++R ++++ L+ A
Sbjct: 112 IMAQRKVKRLPVVNAEGLLEGVVSRADLLKVFLRTADA 149
>gi|148257031|ref|YP_001241616.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
gi|146409204|gb|ABQ37710.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
Length = 242
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G PV+D KL+G+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVKGD 128
Query: 218 GKLVGIITRGNVVRA 232
++VGI++R N+++A
Sbjct: 129 -QVVGIVSRANLLQA 142
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V T++ +AA ++L+ LPVVDA GKL+G+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIR 55
>gi|46580320|ref|YP_011128.1| hypothetical protein DVU1911 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602299|ref|YP_966699.1| hypothetical protein Dvul_1253 [Desulfovibrio vulgaris DP4]
gi|387153254|ref|YP_005702190.1| hypothetical protein Deval_1396 [Desulfovibrio vulgaris RCH1]
gi|46449737|gb|AAS96387.1| CBS domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562528|gb|ABM28272.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
gi|311233698|gb|ADP86552.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
RCH1]
Length = 150
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPE 156
V P T + +A ILVE++ G PV+DD +LVG++ DL I+ + + S F
Sbjct: 15 VAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDL-----ITQHKKLNIPSFFTV 69
Query: 157 VDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+D + +E+ + + + + +V MT PV V T +++ A L++++K LPVV
Sbjct: 70 LDGFIPLTSMSELDEQMRRISATIVKHAMTADPVTVTPETAIDEIASLMVDSKLHTLPVV 129
Query: 215 DADGKLVGIITRGNVVR 231
+ +GKLVG+I + +++R
Sbjct: 130 E-NGKLVGVIGKEDLLR 145
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
D+MT +PV V T + AAR+L+E K+ LPVVD G+LVG+I + +++
Sbjct: 6 DIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLI 55
>gi|389696309|ref|ZP_10183951.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388585115|gb|EIM25410.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 231
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P+TT+ EA ++++ RI+G PV D LVG++S+ DLL + G+ R S +
Sbjct: 14 VEPSTTIAEAAKLMLADRISGLPVTMRDGTLVGMLSEGDLLRRGEL-GTERKRPSWLEFL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K +E +++G+ V +M+ PV R +E+ + + +RLPV+D +
Sbjct: 73 IGSGKLADE----YVRSHGRKVEQVMSTDPVTTRRDAPIEEIVTAMDRHRIKRLPVID-N 127
Query: 218 GKLVGIITRGNVVRA 232
GK+VGI+ R +V+RA
Sbjct: 128 GKVVGIVARSDVLRA 142
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT + V +T + +AA+L+L + LPV DG LVG+++ G+++R
Sbjct: 2 IVEDVMTAPVISVEPSTTIAEAAKLMLADRISGLPVTMRDGTLVGMLSEGDLLR 55
>gi|435852150|ref|YP_007313736.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
gi|433662780|gb|AGB50206.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
Length = 157
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI- 143
V D M T ++ V P TT+ EA ++L + I+G PV+++ ++VG+VS+ DLL L +
Sbjct: 3 VKDIMNT--DVIVCDPHTTISEASQLLKKHNISGLPVVEEG-RVVGIVSEGDLLKLLEVP 59
Query: 144 SGSGRADNSMFPEVDSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
G S F ++ + + E + +L K V ++M ++ +++DA
Sbjct: 60 EHGGLWLPSPFEVIEIPIRELLNWEETKHMLDDIGSKPVSEIMQKNVHLISPENSIQDAV 119
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
RL+ + K RLPVV+ D LVGIITRG+++
Sbjct: 120 RLITKHKVNRLPVVEDD-ILVGIITRGDIIHG 150
>gi|451337193|ref|ZP_21907741.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449420152|gb|EMD25654.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 201
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT A E+L E T PV+DDD +L+G+V++ DL+ FP+
Sbjct: 14 VTPETTAKHAAEVLAEHGFTALPVVDDDERLIGIVTEADLI------------RDRFPDD 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K Q G V ++MT + ++L + R LL+ + R +P+VD
Sbjct: 62 IRSAK-----QPSGQAAPGATVAEVMTTPVTGMSAGSDLAEVGRALLDGRIRAMPIVDG- 115
Query: 218 GKLVGIITRGNVVRA 232
K+VGI+TRG+ VRA
Sbjct: 116 AKVVGILTRGDFVRA 130
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
DLMT V V T + AA +L E + LPVVD D +L+GI+T +++R
Sbjct: 5 DLMTRPVVTVTPETTAKHAAEVLAEHGFTALPVVDDDERLIGIVTEADLIR 55
>gi|325001432|ref|ZP_08122544.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudonocardia sp. P1]
Length = 282
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 27/146 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT L V P +DEA E+L+ R T PV+DDD +L+G+VS+ DL+A
Sbjct: 164 VSDVMTDGG-LVAVPPGLALDEAAEVLLSYRYTAVPVVDDDDRLLGVVSEADLMA----- 217
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
T+ + S G M D+ T P L DA +LL
Sbjct: 218 ----------------GSTYGGRRTRASTVAGVMTYDVETVHP-----GDPLADAEQLLA 256
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVV 230
E +R +PVVD DG LVG+I+R +++
Sbjct: 257 ERGFRVIPVVDDDGVLVGVISRSDLL 282
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 35/147 (23%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E + V + A E + E R + PV+D + LVG++S D+L
Sbjct: 7 DVMT--ERVVTVWADAPLSRAQERMAEARFSALPVVDRRFSLVGVISLVDVL-------R 57
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA-RLLLE 205
R D + VGD MT V V+ TT++ A R+ +
Sbjct: 58 HRDDPN------------------------ATVGDAMTEQVVTVQATTSVSIVAHRMRVY 93
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRA 232
+ R +PVV G L+G+ITR +++RA
Sbjct: 94 GELRLVPVVQR-GGLLGVITRSDLLRA 119
>gi|302526804|ref|ZP_07279146.1| predicted protein [Streptomyces sp. AA4]
gi|302435699|gb|EFL07515.1| predicted protein [Streptomyces sp. AA4]
Length = 200
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 25/147 (17%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ E V+P T+ DEA IL E+ PV+DDD +LVG+V++ DL G
Sbjct: 5 DLMTSPAE--TVRPWTSADEAAGILAERGFPALPVVDDDGRLVGIVTEADL-------GR 55
Query: 147 GR--ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
GR A + P +T VG +MT + +L D R L+
Sbjct: 56 GRTPAPDGRRPYHPGALET--------------TVGAVMTSPAAAMPPGADLADVCRELV 101
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVR 231
+ K + +P+V ++VGI+TRG+VVR
Sbjct: 102 DAKSQAMPIVVEGSRVVGIVTRGDVVR 128
>gi|398822156|ref|ZP_10580542.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398227150|gb|EJN13386.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 242
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V++D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVNDTGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT +PV + E T L + + +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRKVSEVMTASPVTITEDTALAEIVDHMERNNVKRLPVVRGD 128
Query: 218 GKLVGIITRGNVVRA 232
K+VGI++R N+++A
Sbjct: 129 -KVVGIVSRANLLQA 142
>gi|367472385|ref|ZP_09471968.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365275469|emb|CCD84436.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 242
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VSPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + L+ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTRSPLTITEDAALAEIVELMEKNHVKRLPVVKGD 128
Query: 218 GKLVGIITRGNVVRA 232
++VGI++R N+++A
Sbjct: 129 -QVVGIVSRANLLQA 142
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVSPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIR 55
>gi|398780622|ref|ZP_10544951.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
gi|396998087|gb|EJJ09021.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
Length = 224
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG MT + V+P T E ++ L E +T PV+D + +G+VS+ DLL
Sbjct: 5 TVGVLMTRG--VVQVRPQTPFKEIVKTLTENDVTAVPVVDATGRPMGVVSEADLLR---- 58
Query: 144 SGSGRADNSM---FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+G AD S P +++ W+ +K G +LM+ V R + +AA
Sbjct: 59 KSAGHADPSGRTPIPHLEA-WER--------AKAEGARAEELMSAPAVCARAEWTVVEAA 109
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
RL+ +RLPVVD KLVGI++RG+++R L+ A
Sbjct: 110 RLMEVQNVKRLPVVDEADKLVGIVSRGDLLRVFLRKDEA 148
>gi|329938560|ref|ZP_08287985.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
gi|329302533|gb|EGG46424.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
Length = 243
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS----TWKTFNE 166
L E R+ G PV+D+D +VG+VS+ DL +A+ + E W T
Sbjct: 30 LAEHRVGGLPVVDEDGHVVGVVSETDLTI-------HQAETRLVHEPPRGRRFAWLT-PR 81
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
++ +K + + G+LMT + V + +AAR ++ + RLPV+D +G+LVGI++R
Sbjct: 82 ARRRTAKAHARTAGELMTTPAITVHAQDTVVEAARTMVRHQVHRLPVLDEEGRLVGIVSR 141
Query: 227 GNVVRAALQ 235
++VR L+
Sbjct: 142 HDLVRTFLR 150
>gi|365893976|ref|ZP_09432141.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425300|emb|CCE04683.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 141
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T G++MT ++ V TTV E E+L +PV D+D ++G+V+ +D+L +
Sbjct: 8 TAGNYMT--RDVKTVTRDTTVRELSEMLDRDDFNSYPVTDND-AVIGIVTKFDMLRCFAF 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ N M P+ S + V D+MT + VR T L +L+
Sbjct: 65 TQ-----NQMLPQ--------------YSDLMNRKVSDIMTTEFIYVRPDTKLTRVLQLM 105
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+E + R LPV D + +LVGII R ++VRA
Sbjct: 106 VEHRIRSLPVTDGENRLVGIIAREDIVRA 134
>gi|378827333|ref|YP_005190065.1| inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
gi|365180385|emb|CCE97240.1| Inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
Length = 259
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 19/148 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D M+ K + V P ++ A +++E RI+G PV D+ KLVG++S+ DLL L S
Sbjct: 46 DIMSKK--VISVSPEYSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRAELGSA 103
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G G+ + PE K + VGD+MT V V E L A ++
Sbjct: 104 AGRGQVSDRPEPEA-------------FIKGHSWRVGDVMTRPVVTVDEDVPLGRVAAIM 150
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVR 231
+ +R+P V A G +VGII+R +++R
Sbjct: 151 AANEIKRIPAVRA-GAMVGIISRSDILR 177
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+M+ + V ++ AAR++LE + LPV D GKLVGI++ G+++R A
Sbjct: 46 DIMSKKVISVSPEYSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRA 98
>gi|376296861|ref|YP_005168091.1| hypothetical protein DND132_2083 [Desulfovibrio desulfuricans
ND132]
gi|323459423|gb|EGB15288.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 224
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT +++ + P ++ +A +++ +K I+ PV+D+ +++G+VSD D+
Sbjct: 3 VANWMT--KDVITITPERSMMKASKLMKDKAISRLPVVDESGRIIGIVSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T +E+ LLS+ + D+MT V +R+T +E AA L+L
Sbjct: 54 ----KDAS--PSKATTLDV-HELYYLLSEIK---IADIMTKKVVTIRDTETVEKAAVLML 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
E + LPVVD + +VGIIT ++ + ++I E GAQ
Sbjct: 104 EGNFGGLPVVDENDHVVGIITDTDIFKVLVEISGIYEGGAQ 144
>gi|451948868|ref|YP_007469463.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
gi|451908216|gb|AGF79810.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
Length = 203
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V TT + E + + I+G PV+DD+ K+VG+VS+ D L G S V
Sbjct: 73 VTETTPLLEVANRMADASISGVPVMDDNKKVVGIVSEQDFL-----KGLNNGCKSFMAVV 127
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ V +S M GD+MT PV ++E T L + ++ + K RLPV+D +
Sbjct: 128 ARCLQGLGGVDFSISM---GMAGDIMTRPPVTIKENTPLVEITEIMSKNKINRLPVLDQE 184
Query: 218 GK-LVGIITRGNVVRAAL 234
K +VGI++R ++VRA L
Sbjct: 185 EKVVVGIVSRDDLVRAQL 202
>gi|325300047|ref|YP_004259964.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
gi|324319600|gb|ADY37491.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
Length = 491
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVKDALGIMAEYKIGGIPVVDDENYLVGIVTNRDL----------RFERDMSKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T AP T++E A+ +L K +LPVVD +
Sbjct: 154 D----------EVMTKEN------IVTTAP-----GTDMETASEILQRNKIEKLPVVDEN 192
Query: 218 GKLVGIITRGNVVRA 232
GKL+G+IT ++ +A
Sbjct: 193 GKLIGLITYKDITKA 207
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + P T ++ A EIL +I PV+D++ KL+GL++ D+
Sbjct: 154 DEVMTKENIVTTAPGTDMETASEILQRNKIEKLPVVDENGKLIGLITYKDI 204
>gi|410720304|ref|ZP_11359660.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
gi|410601086|gb|EKQ55606.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
Length = 158
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-T 163
L E +I+G PV++ + +LVG++S+ D++ L + + P E+ K
Sbjct: 28 LRENKISGAPVMNKEGQLVGIISEGDIMRLLEVHSPHI--RLILPSPLDLIELPVRMKYE 85
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
+E+ + ++K ++G++MT V + ++ DAA+L+ +RLPV+D+DGK+VGI
Sbjct: 86 MDEIAEDMNKAASLLIGEIMTKKVVTITPDADISDAAQLMDTHDVKRLPVLDSDGKMVGI 145
Query: 224 ITRGNVVRAALQ 235
ITRG+++ A ++
Sbjct: 146 ITRGDIIGAMVR 157
>gi|85373724|ref|YP_457786.1| hypothetical protein ELI_04485 [Erythrobacter litoralis HTCC2594]
gi|341615026|ref|ZP_08701895.1| CBS [Citromicrobium sp. JLT1363]
gi|84786807|gb|ABC62989.1| CBS [Erythrobacter litoralis HTCC2594]
Length = 147
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 27/139 (19%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
P+T+V EA ++V+ PV+DD LVG+++D D +A ++ +D S
Sbjct: 13 CCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVITDRD-IACRCVADGKSSDTS---- 67
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
V D+MT +P+ V T+++D + + K RRLPVVD
Sbjct: 68 ----------------------VEDVMTSSPITVTPDTSVDDCRSKMEDNKVRRLPVVDE 105
Query: 217 DGKLVGIITRGNVVRAALQ 235
GK GI+++ ++ R A +
Sbjct: 106 SGKCCGIVSQADIARHANE 124
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
++MT P +T++ +AA L+++ +PVVD G LVG+IT
Sbjct: 5 NVMTSNPACCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVIT 49
>gi|456353952|dbj|BAM88397.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 242
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVDAANIMLQRHVSGLPVVDAAGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + L+ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTKSPLTITEDAALAEIVELMEKNHVKRLPVVKGD 128
Query: 218 GKLVGIITRGNVVRA 232
++VGI++R N+++A
Sbjct: 129 -QVVGIVSRANLLQA 142
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDAAGKLVGVVSEGDFIR 55
>gi|406927826|gb|EKD63787.1| cbs protein [uncultured bacterium]
Length = 149
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T MT + +H V PT V ++ + + +T PV+D KL+G+V++ D+ +
Sbjct: 3 TAKQIMT--KSIHSVNPTAAVKTIIQKMAKAGVTAIPVVDKKNKLLGIVTEADVATHELN 60
Query: 144 SGSGRADNSM--FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ RA + + +++T K E++K ++T DLMT + + E L++
Sbjct: 61 PHTPRAISLLGGLIYLENTEKYNEELKKFCAQT----ASDLMTKEVITINENATLDEIIA 116
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
++ E + RLPV+D G L GI+TR ++++A
Sbjct: 117 IMQEKQVGRLPVIDEKGILKGIVTRTDIIKA 147
>gi|390568219|ref|ZP_10248529.1| signal-transduction protein [Burkholderia terrae BS001]
gi|420246966|ref|ZP_14750389.1| putative transcriptional regulator, contains C-terminal CBS domains
[Burkholderia sp. BT03]
gi|389939909|gb|EIN01728.1| signal-transduction protein [Burkholderia terrae BS001]
gi|398072813|gb|EJL64013.1| putative transcriptional regulator, contains C-terminal CBS domains
[Burkholderia sp. BT03]
Length = 231
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 14/138 (10%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
KP TV EA + LVE RI+G PV+D + L G++S+ DLL R
Sbjct: 15 KPEMTVQEAAKCLVENRISGMPVVDANGVLAGILSEGDLLHRVETGTEKR---------R 65
Query: 159 STW-KTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
S W + F+ + L S K +G+MV D+MT V V ETT + D A L+ + +R+PV+
Sbjct: 66 SRWLELFSSTRDLASTFVKEHGRMVADVMTTTVVTVDETTPVADIAELMETRRIKRVPVM 125
Query: 215 DADGKLVGIITRGNVVRA 232
DG LVGIITRGN++RA
Sbjct: 126 R-DGALVGIITRGNLIRA 142
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MTP+ + + +++AA+ L+E + +PVVDA+G L GI++ G+++ H
Sbjct: 5 DVMTPSVICAKPEMTVQEAAKCLVENRISGMPVVDANGVLAGILSEGDLL-------HRV 57
Query: 241 EMGAQ 245
E G +
Sbjct: 58 ETGTE 62
>gi|409399062|ref|ZP_11249434.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
gi|409131706|gb|EKN01395.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
Length = 233
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 14/151 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ + P T++ A +V +I+G PV+D +LVG++S+ DLL +
Sbjct: 3 VADVMT--RDVVAIDPQTSLATAAGWMVSHQISGLPVLDQAGRLVGILSEGDLLHRPELG 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G+ M + + L + T+G+ VGD+MT P VR L AA
Sbjct: 61 TCGKQAGWM--------RGIMRAEILAADYAHTHGRQVGDVMTRNPSFVRPDLPLAKAAD 112
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ + + +RLPV+ + LVG++ R +++RA
Sbjct: 113 LMRQKQVKRLPVLQGE-TLVGMLCRFDILRA 142
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+V D+MT V + T+L AA ++ + LPV+D G+LVGI++ G+++
Sbjct: 2 IVADVMTRDVVAIDPQTSLATAAGWMVSHQISGLPVLDQAGRLVGILSEGDLL------- 54
Query: 238 HATEMG 243
H E+G
Sbjct: 55 HRPELG 60
>gi|398356242|ref|YP_006529569.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
gi|399995456|ref|YP_006575694.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|365182303|emb|CCE99153.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|390131489|gb|AFL54869.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
Length = 218
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D MT K + V P ++ A ++E RI+G PV DDD KLVG++S+ DLL L S
Sbjct: 5 DIMTKK--VLSVSPEHSISHAALTMLENRISGLPVCDDDRKLVGILSEGDLLRRAELGSA 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + PE +KT+ VGD+MT V V E L ++
Sbjct: 63 AWPSAIRDKAEPEA-------------FTKTHSWRVGDVMTQRVVTVDEDAPLGRIGAIM 109
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PV+ A+ ++VGII+R +++RA
Sbjct: 110 AANQIKRIPVMRAE-EMVGIISRSDILRA 137
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+MT + V ++ AA +LE + LPV D D KLVGI++ G+++R A
Sbjct: 5 DIMTKKVLSVSPEHSISHAALTMLENRISGLPVCDDDRKLVGILSEGDLLRRA 57
>gi|411006741|ref|ZP_11383070.1| CBS domain containing membrane protein [Streptomyces globisporus
C-1027]
Length = 247
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TV D M+ V + + +E++ E +++ PV+ + ++VG+VS+ DLL ++
Sbjct: 46 HTVSDVMSHAPV--AVGSHASYRQVVELMAEAKVSALPVLAGEGRVVGVVSEADLLHKEA 103
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
GSG + ++D +K+ +V DLM+ V V L +AAR+
Sbjct: 104 FRGSGPPAAA---QLDEAFKS-----------AAVLVEDLMSSPAVTVHADAPLAEAARI 149
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLPVV+++G L G+++RG++++ L+
Sbjct: 150 MARKHVKRLPVVNSEGMLEGVVSRGDLLKVFLR 182
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
+E ++++ V D+M+ APV V + L+ E K LPV+ +G++VG++
Sbjct: 34 SEQEEVIVSVTPHTVSDVMSHAPVAVGSHASYRQVVELMAEAKVSALPVLAGEGRVVGVV 93
Query: 225 TRGNVVR 231
+ +++
Sbjct: 94 SEADLLH 100
>gi|225352070|ref|ZP_03743093.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157317|gb|EEG70656.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 330
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 30/176 (17%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
+A P+ V TV D M + +++ V V +A+ +++EK I+G P++DD+ +VG
Sbjct: 166 SAQQHVPALDVKTVADVM--QHDVYTVASDAEVRDAVRMMLEKNISGMPIVDDERHVVGF 223
Query: 132 VSDYDLL---ALDS---------ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179
+SD D+L A D+ ++G R + FPE+ V + +K
Sbjct: 224 ISDSDVLRRFAQDNAPVSDISTLVTGMARGE---FPELSHAELLDMNVMVIAAK------ 274
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
PA V V+ N+ ++ +Y+++PVV+ GKLVG++ RG + R + +
Sbjct: 275 -----PA-VTVQSDANIAQVCQMFGYQQYKKVPVVE-QGKLVGVVNRGRLTRRSFE 323
>gi|377811570|ref|YP_005044010.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357940931|gb|AET94487.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 231
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA-DNSMFPE 156
V P TT+ E ++LV+ I+ PV+D D ++G++S+ DLL + I + + +
Sbjct: 14 VAPETTIHELAKLLVQHHISAAPVVDKDGYVIGVISEGDLLRREEIGTEKEVRRRAWWLD 73
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
+ S + + K++ + VG++M+ PV V E T+L + A +L +R+PV+
Sbjct: 74 MLSDGGAADYI-----KSHARTVGEIMSRDPVCVSEDTSLAEIAAVLESRHIKRVPVL-R 127
Query: 217 DGKLVGIITRGNVVRA 232
+G+LVGI++R N+V+A
Sbjct: 128 EGRLVGIVSRSNLVQA 143
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MT + V V T + + A+LL++ PVVD DG ++G+I+ G+++R
Sbjct: 5 DVMTSSVVSVAPETTIHELAKLLVQHHISAAPVVDKDGYVIGVISEGDLLR 55
>gi|198276171|ref|ZP_03208702.1| hypothetical protein BACPLE_02360 [Bacteroides plebeius DSM 17135]
gi|198270983|gb|EDY95253.1| inosine-5'-monophosphate dehydrogenase [Bacteroides plebeius DSM
17135]
Length = 491
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K + V +AL+++ E +I G PV+DD+ LVG+V++ DL R + + +
Sbjct: 104 IKRGSVVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL----------RFEKDLNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P T++E A+++L E K +LPVVD D
Sbjct: 154 D----------EVMTKEN------IVTTEP-----GTDMETASKILQENKIEKLPVVDKD 192
Query: 218 GKLVGIITRGNVVRA 232
GKL+G+IT ++ +A
Sbjct: 193 GKLIGLITYKDITKA 207
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +P T ++ A +IL E +I PV+D D KL+GL++ D+
Sbjct: 154 DEVMTKENIVTTEPGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDI 204
>gi|20092371|ref|NP_618446.1| hypothetical protein MA3565 [Methanosarcina acetivorans C2A]
gi|19917622|gb|AAM06926.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 155
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEV 157
KP TV EA ++L E I+G PV++D +LVG+VS+ DLL L I G S F +
Sbjct: 16 KPDDTVREAAKLLKENNISGAPVLEDG-QLVGVVSEADLLELLVIPEKGNLWLPSPFEVI 74
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +K+LS V ++MT + ++E+A+ L++ + RLPV+
Sbjct: 75 EVPIRELLSWEETKKMLSDVGSTKVEEMMTKEVHTISSEASVEEASELMVRHRINRLPVM 134
Query: 215 DADGKLVGIITRGNVVRA 232
+ D ++VGI+TRG+++
Sbjct: 135 END-RVVGIVTRGDIIEG 151
>gi|39937306|ref|NP_949582.1| CBS/transport-associated domain-containing protein
[Rhodopseudomonas palustris CGA009]
gi|192293086|ref|YP_001993691.1| signal transduction protein with CBS domains [Rhodopseudomonas
palustris TIE-1]
gi|39651164|emb|CAE29687.1| CBS domain:Transport-associated domain [Rhodopseudomonas palustris
CGA009]
gi|192286835|gb|ACF03216.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 24/148 (16%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
+L + P ++ +A +++ ++G PV+DDD KL+G++S+ D + RA
Sbjct: 10 QLVTIGPEASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIR--------RA---- 57
Query: 154 FPEVDSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
E+ + K ++ LL +G+ VG++MT P + E T++E +L+
Sbjct: 58 --EIGTQRKRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTQHPYTISEDTSIETIVKLME 115
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R PV+ D LVGI+TR N++RA
Sbjct: 116 KHHVKRFPVMRGD-LLVGIVTRKNLLRA 142
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+MT V + ++ DAA +++ LPVVD DGKL+GII+ G+ +R A E
Sbjct: 6 IMTRQLVTIGPEASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIRRA-------E 58
Query: 242 MGAQ 245
+G Q
Sbjct: 59 IGTQ 62
>gi|429726903|ref|ZP_19261688.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
473 str. F0040]
gi|429145343|gb|EKX88433.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
473 str. F0040]
Length = 493
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K TV EAL+++ E I G PV+DD+ +LVG+V++ DL R ++++ +
Sbjct: 106 IKRGKTVREALDLMAEYHIGGIPVVDDEMRLVGIVTNRDL----------RFEHNLDKAI 155
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D + N L TN TT+L A+ +L + K +LPV+DA+
Sbjct: 156 DEVMTSEN-----LVTTN----------------TTTDLVAASEILQKNKIEKLPVIDAN 194
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 195 GKLVGLITYKDITKA 209
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + T E L TT + A EIL + +I PVID + KLVGL++ D+
Sbjct: 156 DEVMTSENLVTTNTTTDLVAASEILQKNKIEKLPVIDANGKLVGLITYKDI 206
>gi|336476762|ref|YP_004615903.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
gi|335930143|gb|AEH60684.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
Length = 154
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEV 157
KP + + ++L + I+G PV++ + KL+GL+S+ DLL L I G S F +
Sbjct: 15 KPDDRISDVAQLLRKNEISGMPVVESE-KLIGLISELDLLQLLEIPKHGTYWLPSPFEVI 73
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +++L+ K V ++M V ++E+A+ ++++ K RLPVV
Sbjct: 74 EIPIRELISWEEAKRMLTNIGTKPVKEIMRTKIYTVSPEDSIEEASTIMIKNKINRLPVV 133
Query: 215 DADGKLVGIITRGNVVRA 232
++GKLVGI+TRG++++
Sbjct: 134 -SEGKLVGIVTRGDIIKG 150
>gi|443318846|ref|ZP_21048089.1| chloride channel protein EriC [Leptolyngbya sp. PCC 6406]
gi|442781584|gb|ELR91681.1| chloride channel protein EriC [Leptolyngbya sp. PCC 6406]
Length = 868
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 87/209 (41%), Gaps = 43/209 (20%)
Query: 27 TSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVY--- 83
T+F L LP ++ S C V +DRV+ + + A + N A + +
Sbjct: 392 TNFNLVLPLMIGSGLACLV-------ADRVTTGSLYNGLLAFKGIHLNPAPSENNPWAHL 444
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D M + E + T ++ EAL+ GFPV+ KLVG+V+ DL
Sbjct: 445 TAADLMQRRVE--TLTATMSIPEALDAFARSHHRGFPVLTQG-KLVGIVTQTDL------ 495
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
EV T +T V D MTP PV V L LL
Sbjct: 496 -----------AEVPQT------------RTAAYTVADFMTPRPVTVAPEAPLPQVLYLL 532
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
K RLPV D KLVGIITRG+++RA
Sbjct: 533 NRLKVSRLPVTDGS-KLVGIITRGDIIRA 560
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV DFMT + V P + + L +L +++ PV D KLVG+++ D++ +S
Sbjct: 506 YTVADFMTPRPV--TVAPEAPLPQVLYLLNRLKVSRLPVTDGS-KLVGIITRGDIIRAES 562
Query: 143 ISGSGRADNSM 153
SG++ M
Sbjct: 563 EKISGQSSGRM 573
>gi|316935767|ref|YP_004110749.1| putative signal transduction protein [Rhodopseudomonas palustris
DX-1]
gi|315603481|gb|ADU46016.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris DX-1]
Length = 243
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 24/144 (16%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P ++ +A +++ I+G PV+DDD KL+G++S+ D + RA E+
Sbjct: 14 IGPEASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIR--------RA------EI 59
Query: 158 DSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
+ K ++ LL +G+ VG++MT P V E T++E +L+ +
Sbjct: 60 GTERKRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTRHPYTVTEETSIETIVKLMEKHHV 119
Query: 209 RRLPVVDADGKLVGIITRGNVVRA 232
+R PV+ D LVGI+TR N++RA
Sbjct: 120 KRFPVMRGD-LLVGIVTRKNLLRA 142
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+MT V + ++ DAA +++ LPVVD DGKL+GII+ G+ +R A
Sbjct: 6 IMTRQVVTIGPEASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIRRA 57
>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
Length = 144
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 26/132 (19%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P+ T+ E ++L EKRI +++D+ +L G+VS+ D++ + + G P+V +
Sbjct: 19 PSVTLAEVAQVLSEKRIGAIILVEDNGRLAGIVSERDIVRVVAARG---------PDVLT 69
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
++V + MTP V VRE ++++A RL+ E ++R LPVVD +
Sbjct: 70 -----------------QLVKEAMTPKVVTVREDMSIDEAMRLMTEKRFRHLPVVDETEQ 112
Query: 220 LVGIITRGNVVR 231
LVG ++ G+VV+
Sbjct: 113 LVGFVSIGDVVK 124
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V+ ++DEA+ ++ EKR PV+D+ +LVG VS D++
Sbjct: 83 VREDMSIDEAMRLMTEKRFRHLPVVDETEQLVGFVSIGDVV 123
>gi|398353803|ref|YP_006399267.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
gi|390129129|gb|AFL52510.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
Length = 263
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMF 154
+ P ++ A +++E RI+G PV D+ KLVG++S+ DLL L S +G G+ +
Sbjct: 55 LSPEHSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRAELGSAAGRGQVSDRPE 114
Query: 155 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
PE K + VGD+MT V V E L A ++ + +R+PVV
Sbjct: 115 PEA-------------FIKGHSWRVGDVMTRDVVTVDEDVPLGRVAAIMAANEIKRIPVV 161
Query: 215 DADGKLVGIITRGNVVR 231
A G +VGII+R +++R
Sbjct: 162 RA-GAMVGIISRSDILR 177
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+M+ + + ++ AAR++LE + LPV D GKLVGI++ G+++R A
Sbjct: 46 DIMSKNVLSLSPEHSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRA 98
>gi|387906284|ref|YP_006336621.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387581176|gb|AFJ89890.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 230
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P V E ++LVE I+ PV D D KL+G++S+ DL+ I G+
Sbjct: 5 DVMTTP--VIFATPEMGVQETAKLLVEHSISAVPVADADGKLIGIISEGDLVRRVEI-GT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
G S + E+ + + E+ K + + V DLM+ V V E T L + A LL
Sbjct: 62 GARRRSWWLELLA---SSRELASQYVKEHAQTVKDLMSINVVTVDEDTPLSEVAELLERY 118
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PVV D K+ G+++R ++VRA
Sbjct: 119 RIKRVPVVKND-KVTGLVSRADLVRA 143
>gi|158522990|ref|YP_001530860.1| signal transduction protein [Desulfococcus oleovorans Hxd3]
gi|158511816|gb|ABW68783.1| putative signal transduction protein with CBS domains
[Desulfococcus oleovorans Hxd3]
Length = 423
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + H V P T V + L ++ + I V+D + L+GL+SD DLL + SG
Sbjct: 283 RRDTHTVSPDTPVADVLRLIGDNDIQRVAVVDAENNLLGLISDKDLLRCFAQKQSGIW-- 340
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ V S +K +E L+ G G +M + V+E +E+A L++E +RL
Sbjct: 341 GLLSRVGSAFK-HDEADTCLA---GATAGTVMNTELITVKEEMLIEEAIGLMVERGLKRL 396
Query: 212 PVVDADGKLVGIITRGNVVRAAL 234
PVVDA+G+ G+I+R +++R
Sbjct: 397 PVVDAEGRFAGMISRDSLLRTGF 419
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T N+ P +V D MT + V T +DE +L+ TG PV+D + VG+
Sbjct: 107 TRNAFFPRQ--LSVRDVMTA--DPRSVTSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGV 162
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
++ DL+ R + ++ +LS+ G+ +MT V +
Sbjct: 163 ITQGDLI---------RKGGLPLRLGLLAESDQDRMKSVLSQMAGRQAEQVMTGPAVTIA 213
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
E L +A L++ ++RLPV D +G+L G+++R ++ R ++
Sbjct: 214 EDRPLAEAVDLMISRNFKRLPVTDKEGRLCGMVSRLDIFRTVMR 257
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 45/161 (27%)
Query: 80 SGVYTVGDFMTTKEEL---------HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130
+G Y G+ TT+ EL ++V P+T D L+ L +D G
Sbjct: 46 AGCYESGETATTRFELLSFNMPVRIYIVMPSTQTDRVLDGL------------NDMVTDG 93
Query: 131 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
+V+ +DL + + R N+ FP + LS V D+MT P V
Sbjct: 94 IVAIHDLNVV-----AHRTRNAFFP-------------RQLS------VRDVMTADPRSV 129
Query: 191 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
T L++ RLLL + + +PVVD G+ VG+IT+G+++R
Sbjct: 130 TSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGVITQGDLIR 170
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
EA+++++ + PV D + +L G+VS D+ R P+ W F
Sbjct: 220 EAVDLMISRNFKRLPVTDKEGRLCGMVSRLDIF---------RTVMREAPD----WNAFR 266
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
QK+ T+ K V D+ V T + D RL+ + +R+ VVDA+ L+G+I+
Sbjct: 267 S-QKV-DVTHLKQVADIARRDTHTVSPDTPVADVLRLIGDNDIQRVAVVDAENNLLGLIS 324
Query: 226 RGNVVRAALQ 235
+++R Q
Sbjct: 325 DKDLLRCFAQ 334
>gi|448433394|ref|ZP_21585915.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
gi|445686407|gb|ELZ38731.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
Length = 399
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT +E+LH V +V E + + E+R TG+PVID D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAELMSRMFEERHTGYPVIDGD-ELVGMVTLEDA------ 307
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M D++ AP E L A + +
Sbjct: 308 ------------------RSIREVERDAYRVDDVMATDVVAAAP----EADAL-TALQTM 344
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVD DG+LVG+I+R +++ A
Sbjct: 345 QEHGVGRLPVVDGDGELVGLISRSDLMTA 373
>gi|424887354|ref|ZP_18310959.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175126|gb|EJC75169.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 240
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V +T+V EA +++++ RI+G PV+D + LVG+VS+ D L ++ + R + + +
Sbjct: 14 VTASTSVAEAAKLMLDNRISGLPVVDANGTLVGIVSEGDFLRRSELN-TERKRSWLLEWL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S +E +T+G+ V ++MT + T + +A RL+ +RLPVV A+
Sbjct: 73 ASPRTIADE----YVRTHGRRVEEVMTSPVSAIAPTAAISEAVRLMERRDIKRLPVV-AE 127
Query: 218 GKLVGIITRGNVVRAALQ 235
G+LVGI+ R +++RA Q
Sbjct: 128 GRLVGILARSDLLRALSQ 145
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V +MT + V +T++ +AA+L+L+ + LPVVDA+G LVGI++ G+ +R
Sbjct: 2 LVQTIMTSPAITVTASTSVAEAAKLMLDNRISGLPVVDANGTLVGIVSEGDFLR 55
>gi|384217331|ref|YP_005608497.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
gi|354956230|dbj|BAL08909.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
Length = 242
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR
Sbjct: 14 VTPHTSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFVRRSEI-GTGRKRGR----- 67
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
W F E +G+ V ++MT + V + E T L + L+ +RLPV
Sbjct: 68 ---WLRFILGPGESASDFVHEHGRKVSEVMTTSVVTITEDTALAEIVDLMERNNVKRLPV 124
Query: 214 VDADGKLVGIITRGNVVRA 232
V D K+VGI++R N+++A
Sbjct: 125 VRGD-KVVGIVSRANLLQA 142
>gi|313149549|ref|ZP_07811742.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
3_1_12]
gi|313138316|gb|EFR55676.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
3_1_12]
Length = 491
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE AA++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAAAQILQHHKIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKL+G++T ++ +A
Sbjct: 193 GKLIGLVTYKDITKA 207
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAAAQILQHHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|282857772|ref|ZP_06266981.1| CBS domain protein [Pyramidobacter piscolens W5455]
gi|282584442|gb|EFB89801.1| CBS domain protein [Pyramidobacter piscolens W5455]
Length = 155
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRA 149
K +L V TV++A+ +L ++G PV+DD W+LVG +S+ D+L L S
Sbjct: 13 KRDLTAVMAEDTVEDAMHVLRSHSLSGVPVVDDQWRLVGFLSESDILRSVLPSYLEILAQ 72
Query: 150 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
D+ ++ E + K F++V+ +V D M V+ TN+ + A L+L K +
Sbjct: 73 DSFLYGEHELLVKKFSQVR-------AGVVRDYMQACCQSVQPETNIMNVADLMLRLKVK 125
Query: 210 RLPVVDADGKLV-GIITRGNVVRAALQIKHAT 240
RLPVV +G+L+ GII R ++ + +A+
Sbjct: 126 RLPVV--EGRLLMGIIDRSDLCEYLMNSGNAS 155
>gi|436842251|ref|YP_007326629.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432171157|emb|CCO24528.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 151
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPE 156
++P T + A ++L++K + G PV+D +LVG++ DL+A SIS S+F
Sbjct: 15 LEPETEIGAAAKLLLDKHLNGVPVVDKAGELVGVICQSDLVAQQKSISMP-----SLFTI 69
Query: 157 VDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+D + +++++ ++K V MTP PV V T++E A L++E K LPVV
Sbjct: 70 LDGFIPLSSNDDLEREVNKIAATKVAHAMTPDPVTVTPDTSIEKIADLMVERKLYTLPVV 129
Query: 215 DADGKLVGIITRGNVVRAALQIK 237
+ DGKL+G++ + +V++ + K
Sbjct: 130 E-DGKLIGVVGKEDVLKVLTKAK 151
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
D+MT + + T + AA+LLL+ +PVVD G+LVG+I + ++V
Sbjct: 6 DIMTSGALTLEPETEIGAAAKLLLDKHLNGVPVVDKAGELVGVICQSDLV 55
>gi|116249467|ref|YP_765305.1| hypothetical protein pRL90009 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254115|emb|CAK03717.1| conserved CBS domain hypothetical protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 226
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 84/144 (58%), Gaps = 10/144 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + + P + A+ ++++ ++G PVIDD+ ++ GL+++ DLL I +
Sbjct: 5 DIMTTN--VVSIGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGLLTEGDLLLRREIRFA 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
RA + PE+ S ++++ +S +NG V D+M+ +V + + D A L
Sbjct: 63 PRAARA--PEIISEI----DLERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQAH 115
Query: 207 KYRRLPVVDADGKLVGIITRGNVV 230
+ +RLP+V+ DG+LVGI++R +++
Sbjct: 116 RIKRLPIVE-DGRLVGIVSRRDIL 138
>gi|239906907|ref|YP_002953648.1| hypothetical protein DMR_22710 [Desulfovibrio magneticus RS-1]
gi|239796773|dbj|BAH75762.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 218
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ ++ +A I+ +K+I PV+D D KLVG++S+ DL A
Sbjct: 3 VGDWMST--DVATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIISERDLKA----- 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D E+ LLS+ K + MT PV +R T +E AA ++
Sbjct: 56 ----ASPSTATSLD-----MYEMTYLLSELKVKAI---MTKDPVRIRRTDTVERAALIMR 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K+ LPVVD K+VGIIT ++ R + I + G Q
Sbjct: 104 DRKFGSLPVVDETNKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+VGD M+ E ++ A R++ + K RRLPVVD DGKLVGII+
Sbjct: 2 LVGDWMSTDVATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIIS 49
>gi|410463616|ref|ZP_11317120.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409983278|gb|EKO39663.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 218
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ ++ +A I+ E++I PV+D D KLVG+VS+ DL A S
Sbjct: 3 VGDWMST--DVATATEDVSMIKAGRIMRERKIRRLPVVDKDGKLVGIVSERDLKAASPSS 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+T E+ LLS+ K + MT PV +R T +E AA ++
Sbjct: 61 --------------ATSLDMYEMTYLLSELKVKAI---MTKDPVRIRRTDTVERAALIMR 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K+ LPVVD K+VGIIT ++ R + I + G Q
Sbjct: 104 DRKFGSLPVVDEADKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+VGD M+ E ++ A R++ E K RRLPVVD DGKLVGI++
Sbjct: 2 LVGDWMSTDVATATEDVSMIKAGRIMRERKIRRLPVVDKDGKLVGIVS 49
>gi|407974975|ref|ZP_11155882.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
gi|407429542|gb|EKF42219.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
Length = 216
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 12/131 (9%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS--GRADNSMFPEVDSTW 161
V A+ +++E+ ++G PV D D KLVG++++ DL++ I S R D+ M E
Sbjct: 20 VRHAVSVMLERGVSGLPVTDSDGKLVGIITEGDLMSRKEIGRSLLDRQDHPMTDE----- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
N+++ + N VGD+M+P V V +TT+L ++L +R+PV +D ++
Sbjct: 75 ---NDLKNYI-HCNSWRVGDVMSPEVVTVADTTSLATVTEMMLSRNIKRIPVT-SDRAVI 129
Query: 222 GIITRGNVVRA 232
GI++R ++++A
Sbjct: 130 GIVSRRDLLKA 140
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
D+MT + ++ A ++LE LPV D+DGKLVGIIT G+++
Sbjct: 5 DIMTRDVATISVDAHVRHAVSVMLERGVSGLPVTDSDGKLVGIITEGDLM 54
>gi|336122097|ref|YP_004576872.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856618|gb|AEH07094.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 154
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD---NSM 153
VV V E +++ + +I+G PVIDDD LVG++S+ D++ + + R D S
Sbjct: 13 VVNQNNDVREVIKLFRKYKISGAPVIDDDRNLVGIISESDIIKTLT-THDDRFDIILPSP 71
Query: 154 FPEVDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
F ++ KT E ++ + K V D+MT + V T + +AA ++++ K +R
Sbjct: 72 FDLIELPLKTTLKIEEFREDIEKALKTKVKDVMTKDVITVSPDTPINEAAEIMIKHKIKR 131
Query: 211 LPVVDADGKLVGIITRGNVVRA 232
LPV+ +G+LVGI+TRG+++ A
Sbjct: 132 LPVI-KNGELVGIVTRGDLIEA 152
>gi|357030115|ref|ZP_09092079.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
gi|355533090|gb|EHH02430.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
Length = 232
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++PT ++ +A +++ ++++G PVI D LVG+VS+ D L + G+ R + +
Sbjct: 14 IEPTASISDAAGLMLSRKVSGLPVICSDGTLVGVVSEGDFLRRVEL-GTKRNRSRWLEFL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S + +E K NG+ + ++MT + V +L + L+ +R+PVVD+
Sbjct: 73 VSPGRAADE----YVKANGRRIEEVMTAEVITVPPAASLPEIVELMARHHVKRVPVVDS- 127
Query: 218 GKLVGIITRGNVVRAALQI 236
GK+VGIITR +++RA L +
Sbjct: 128 GKVVGIITRSDLLRALLSV 146
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 178 MVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
M + + APV+ + T ++ DAA L+L K LPV+ +DG LVG+++ G+ +R
Sbjct: 1 MQAEAIMTAPVIGIEPTASISDAAGLMLSRKVSGLPVICSDGTLVGVVSEGDFLR 55
>gi|189425586|ref|YP_001952763.1| hypothetical protein Glov_2529 [Geobacter lovleyi SZ]
gi|189421845|gb|ACD96243.1| CBS domain containing membrane protein [Geobacter lovleyi SZ]
Length = 149
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 17/157 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT +E+ V TT+ E E+ V RI+ PV+D L+G+V++ DL+
Sbjct: 3 TVAEIMT--KEVLTVGTETTIRELAELFVTHRISSLPVVDAAGALIGIVTESDLVE---- 56
Query: 144 SGSGRADNSMFPEVDST--WKTFNE----VQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
++ + P V S W + E ++K L K G+ V D+ P V + T +L
Sbjct: 57 ----QSKSVHLPTVISLFDWVIYLESEKTLEKELKKMGGRTVADIYQPEAVSIAPTASLS 112
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+AA L+ +PV++ +G+LVGI+ R +++R L
Sbjct: 113 EAADLMSAHHTNAVPVLE-NGRLVGIVARIDIIRTLL 148
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
K V ++MT + V T + + A L + + LPVVDA G L+GI+T ++V
Sbjct: 2 KTVAEIMTKEVLTVGTETTIRELAELFVTHRISSLPVVDAAGALIGIVTESDLVE 56
>gi|338740852|ref|YP_004677814.1| hypothetical protein HYPMC_4039 [Hyphomicrobium sp. MC1]
gi|337761415|emb|CCB67248.1| conserved protein of unknown function [Hyphomicrobium sp. MC1]
Length = 242
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 18/150 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTTK + ++P T+ E ++ +++ RI+G PV+ +D KLVG+V++ D L
Sbjct: 5 DVMTTK--VISIRPDATLSEMIKKMLDHRISGLPVVSEDGKLVGVVTEGDCLR------- 55
Query: 147 GRADNSMFPEVD-STWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
RA+ EV S W+ + L+ +T+G+ V ++MT P+ V T L +
Sbjct: 56 -RAETGT--EVKRSFWRDMLTGSETLANEYIRTHGRKVSEVMTRDPISVSPDTELSEVIH 112
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
++ + + +R+PVV DG +VGI++R N+++
Sbjct: 113 VMEKNRIKRVPVV-KDGAVVGILSRANLLQ 141
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+MT + +R L + + +L+ + LPVV DGKLVG++T G+ +R A
Sbjct: 5 DVMTTKVISIRPDATLSEMIKKMLDHRISGLPVVSEDGKLVGVVTEGDCLRRA 57
>gi|227823207|ref|YP_002827179.1| CBS domain-containing protein [Sinorhizobium fredii NGR234]
gi|227342208|gb|ACP26426.1| putative CBS domain protein [Sinorhizobium fredii NGR234]
Length = 223
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 19/158 (12%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSG--RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ SG+ AD ++ P+ + + + + + VGD+MT PV + E L
Sbjct: 59 LCSGASVLMADMAIDPD--------DRANAFVRRCSWR-VGDVMTANPVTIEEEAPLARV 109
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
A L+ E +R+PV+ +G+LVGI++R ++++A K
Sbjct: 110 AGLMQEHGIKRIPVM-RNGELVGIVSRADLLQAIFSTK 146
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V + ++ AA+L+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIR 55
>gi|424875673|ref|ZP_18299332.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393163276|gb|EJC63329.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 226
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 84/144 (58%), Gaps = 10/144 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + + P + A+ ++++ ++G PVIDD+ ++ G++++ DLL I +
Sbjct: 5 DIMTTN--VVSIGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGMLTEGDLLLRKEIRFA 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
RA + PE+ S ++++ +S +NG V D+M+ +V + + D A L
Sbjct: 63 PRAARA--PEIISEI----DLERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQAH 115
Query: 207 KYRRLPVVDADGKLVGIITRGNVV 230
+ +RLP+V+ DG+LVGI++R +++
Sbjct: 116 RIKRLPIVE-DGRLVGIVSRRDIL 138
>gi|317970073|ref|ZP_07971463.1| CBS [Synechococcus sp. CB0205]
Length = 154
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MTT + V T + A++++ + I+G PV+D LVG +++ DL+ +S
Sbjct: 7 VSEVMTTP--IRSVGRETPLQNAVQVMSDHHISGLPVVDAAGALVGELTEQDLMVRES-- 62
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G M +D+ N +Q K + + G VG++M+ AP T L +AARL
Sbjct: 63 GFDAGPYVML--LDAVIYLRNPLQWDKQVHQVLGNSVGEVMSQAPHTCSGDTLLPEAARL 120
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L E +RL V+D + VG++TRG+VVRA
Sbjct: 121 LHEKGTQRLFVLDEQRRPVGVLTRGDVVRA 150
>gi|305666499|ref|YP_003862786.1| CBS domain-containing protein [Maribacter sp. HTCC2170]
gi|88708766|gb|EAR01001.1| CBS domain protein [Maribacter sp. HTCC2170]
Length = 155
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 26/153 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTTK L KP +V+E ++ L+ +I+G PV++D +LVG++S+ D + IS
Sbjct: 23 VSDYMTTK--LITFKPDQSVEEVIDSLINNKISGGPVVNDKNELVGIISEGDCIK--HIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + M + + +MV ++ T + N+ DAA L
Sbjct: 79 DSRYYNMPMDDD----------------RIENRMVKNVET-----IDGNMNIFDAANKFL 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
K RR P+V+A GKLVG I++ ++++A +++K
Sbjct: 118 NEKRRRFPIVEA-GKLVGQISQKDILKATMKLK 149
>gi|359794084|ref|ZP_09296808.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359249670|gb|EHK53253.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 214
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V A +++++ RI+G PV+DD+ ++VG+V++ DL+ + ++ P +
Sbjct: 8 VSPNHSVRHAAQLMLDHRISGLPVLDDNGRVVGIVTEGDLMRRSEL-----GVQALAP-I 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ T + + K++ V D+MT PVVV E T+L A L+ E + +PV+
Sbjct: 62 GRQFTTSEDSARAYVKSHSWKVADVMTADPVVVDEGTSLTQIADLMTERGIKCVPVMRGT 121
Query: 218 GKLVGIITRGNVVRAALQIK 237
L+GI++R +++R ++ K
Sbjct: 122 -HLIGIVSRADLLRVLVKAK 140
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 242
MT V V ++ AA+L+L+ + LPV+D +G++VGI+T G+++R +E+
Sbjct: 1 MTADVVSVSPNHSVRHAAQLMLDHRISGLPVLDDNGRVVGIVTEGDLMR-------RSEL 53
Query: 243 GAQ 245
G Q
Sbjct: 54 GVQ 56
>gi|86134872|ref|ZP_01053454.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85821735|gb|EAQ42882.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 155
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 25/166 (15%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
S + S V D+MTTK L K ++D + +L++ +I+G PV++D+ +L+G++S+
Sbjct: 13 SHSKSEEQILVSDYMTTK--LITFKAEDSLDHVIALLIKNKISGGPVVNDNNQLIGIISE 70
Query: 135 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
D + IS S K +N + S TN VG M + +
Sbjct: 71 TDCIK--HISES---------------KYYN----MPSDTNN-TVGKYMVTDVDTIDKDM 108
Query: 195 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
N+ DAA + + RR PV D +GKL+G +++ +V++AA+++K T
Sbjct: 109 NIFDAAFKFISSHRRRFPVCD-NGKLIGQLSQKDVLKAAIKVKGNT 153
>gi|350560258|ref|ZP_08929098.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782526|gb|EGZ36809.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 160
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+V+ +++LV+K I G PV+D+ +++G+V+ DL+ R ++ P
Sbjct: 14 VGPATSVEALIDLLVDKGINGLPVVDEFGRVLGMVTTGDLIH--------RVADAHVPSR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
DS W+ F + G G +M+ P V + ++ AARLL+E + + L
Sbjct: 66 DSIWRESLYKSVFRHDDSEPNPAEGVTAGAVMSRNPAYVLPSDDMAVAARLLIEHRVKSL 125
Query: 212 PVVDADGKLVGIITRGNVVRA 232
PV+D + +LVG+++R +++R
Sbjct: 126 PVLDEE-RLVGMVSRLDLLRC 145
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
V DLMT PV V T++E LL++ LPVVD G+++G++T G+++
Sbjct: 3 VRDLMTRDPVTVGPATSVEALIDLLVDKGINGLPVVDEFGRVLGMVTTGDLIH 55
>gi|441181333|ref|ZP_20970234.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440614273|gb|ELQ77565.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 241
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG M T E+ + T+ E + +L R TG PV+D D K++G++S+ DL+ +
Sbjct: 6 VGRLMNT--EVVKARSGTSFREVVNLLGRHRKTGLPVVDADGKVLGVISETDLMFRQA-- 61
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A + + + + + ++ G G+LMT PV + ++ +AARL++
Sbjct: 62 ----AQDILQNRWYNRRRLTGSARAARARKRGLRAGELMTSPPVTIGPHQSVTEAARLMV 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
K RLPVVDA+G+L G++TR ++++ L+
Sbjct: 118 TGKLDRLPVVDAEGRLCGLVTRTDLLKVFLR 148
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV-RAALQ 235
+ VG LM V R T+ + LL + LPVVDADGK++G+I+ +++ R A Q
Sbjct: 4 RQVGRLMNTEVVKARSGTSFREVVNLLGRHRKTGLPVVDADGKVLGVISETDLMFRQAAQ 63
>gi|311746125|ref|ZP_07719910.1| polyA polymerase family protein [Algoriphagus sp. PR1]
gi|126576346|gb|EAZ80624.1| polyA polymerase family protein [Algoriphagus sp. PR1]
Length = 153
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+TK L P T+D LE+L +++I+G PV+D+ LVG++S+ D L + I
Sbjct: 23 VKDHMSTK--LVTFLPDDTIDMVLEVLTKRKISGAPVVDESGSLVGIISEVDCLK-EIIK 79
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G + K K M D++T P ++ DAA+ L
Sbjct: 80 GK-----------------YTNTPKFPGKVKDHMSVDVITLGP-----ELSIFDAAQKFL 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
E K RR PV+ DG L+G I+ +++RA ++K T
Sbjct: 118 ELKIRRFPVI-RDGSLIGQISLSDIIRAFPKLKDTT 152
>gi|403739465|ref|ZP_10951846.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
gi|403190668|dbj|GAB78616.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
Length = 201
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
++EAL++L E+RIT PV+ D K+VG++S+ D+L ++ RA + E
Sbjct: 20 LNEALQLLAERRITAVPVVGSDNKVVGVLSEIDILRR-AVEPDARAHATPLAE------- 71
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
S+ K VG++MT P E ++ D L T ++ LPVV DG LVG+
Sbjct: 72 --------SEPLPKTVGEIMTADPRTTTEGADVSDLIDLFTHTSFKSLPVV-RDGDLVGV 122
Query: 224 ITRGNVVRA 232
++R +VVRA
Sbjct: 123 VSRSDVVRA 131
>gi|334341079|ref|YP_004546059.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334092433|gb|AEG60773.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 158
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
K++++ V+ V + L++ VEK+++G PV+ D L G++++ D+L S
Sbjct: 9 KKDIYTVREEEKVHDLLKVFVEKQVSGVPVVGKDHTLAGIITEADILRQIHQPPSFIDFV 68
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ F +DS ++ ++L++ V DLMT + V E T+L +++L K+++L
Sbjct: 69 NYFVVLDSDRVITGQIMEMLNRP----VKDLMTKDVITVDEETSLAKISQILSRRKFKKL 124
Query: 212 PVVDADGKLVGIITRGNVV 230
PVVD KLVG+I R +V+
Sbjct: 125 PVVDGQ-KLVGVINRSDVI 142
>gi|294672823|ref|YP_003573439.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
gi|294473021|gb|ADE82410.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
Length = 493
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 31/131 (23%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
+TV +ALEI+ E I G PV+DDD +LVG+V++ DL R D
Sbjct: 109 STVAQALEIMSEYHIGGIPVVDDDRRLVGIVTNRDLRF------ERRLDRP--------- 153
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
V++++SK N V + T+L AA++L E K +LPVVD D +L+
Sbjct: 154 -----VEEIMSKEN-----------LVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLI 197
Query: 222 GIITRGNVVRA 232
G+IT ++ +A
Sbjct: 198 GLITYKDITKA 208
>gi|21218726|ref|NP_624505.1| hypothetical protein SCO0169 [Streptomyces coelicolor A3(2)]
gi|5748631|emb|CAB53136.1| conserved hypothetical protein SCJ1.18 [Streptomyces coelicolor
A3(2)]
Length = 217
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + + +L + +++ PV++ + +++GLVS+ DLL +
Sbjct: 8 VGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEFR------------- 54
Query: 158 DSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS F ++++L L+K G D+MT V V L AAR++ + K +RLPVV+
Sbjct: 55 DSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAARIMAQRKVKRLPVVN 114
Query: 216 ADGKLVGIITRGNVVRAALQIKHA 239
A+G L G+++R ++++ L+ A
Sbjct: 115 AEGLLEGVVSRADLLKVFLRTDDA 138
>gi|146342162|ref|YP_001207210.1| hypothetical protein BRADO5312 [Bradyrhizobium sp. ORS 278]
gi|146194968|emb|CAL78993.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
Length = 242
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTRSPLTITEDAALAEIVEIMEKNHVKRLPVVKGD 128
Query: 218 GKLVGIITRGNVVRA 232
++VGI++R N+++A
Sbjct: 129 -QVVGIVSRANLLQA 142
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIR 55
>gi|374984110|ref|YP_004959605.1| putative CBS domain-containing protein [Streptomyces
bingchenggensis BCW-1]
gi|297154762|gb|ADI04474.1| putative CBS domain protein [Streptomyces bingchenggensis BCW-1]
Length = 223
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT + V + E + + + R++ PV++ + ++VG+VS+ DLL +
Sbjct: 6 HQVSDVMTRT--VVAVGRDASFKEMVRTMGQWRVSAMPVLEGEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
DS F ++++L L+K +LM+ V V L +AA
Sbjct: 64 FR-------------DSDPDRFEQLRRLPDLAKAGAVAAEELMSAPAVTVHAEATLAEAA 110
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
R++ + +RLPVVD++GKL GI++RG++++ L+
Sbjct: 111 RIMAVRQVKRLPVVDSEGKLQGIVSRGDLLKVFLR 145
>gi|409095026|ref|ZP_11215050.1| inosine 5'-monophosphate dehydrogenase [Thermococcus zilligii AN1]
Length = 485
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 35/139 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
EE+ + P TVD AL ++ + I G PVI+D K+VG++S D+
Sbjct: 101 EEVISISPEETVDYALFLMEKNDIDGLPVIED-GKVVGVISKKDI--------------- 144
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ GK+V D+MT P+ V E+ +A L+ E + RLP
Sbjct: 145 -------------------AVKQGKLVKDVMTAEPITVPESVTTGEALNLMFEHRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVVR 231
VVD +GKLVGIIT ++ +
Sbjct: 186 VVDGNGKLVGIITMSDLAK 204
>gi|423280578|ref|ZP_17259490.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
610]
gi|424665169|ref|ZP_18102205.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
616]
gi|404575033|gb|EKA79778.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
616]
gi|404583785|gb|EKA88458.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
610]
Length = 491
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMSEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE AA++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAAAQILQHHKIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKL+G++T ++ +A
Sbjct: 193 GKLIGLVTYKDITKA 207
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAAAQILQHHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
Length = 147
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 29/149 (19%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ P++TV EA ++V+ PV+DD LVG+V+D D+ G
Sbjct: 5 DVMTSNP--ACCSPSSTVQEAASLMVDNDCGEIPVVDDSGALVGVVTDRDIACRCVAKG- 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
K++ + V ++MT +PV V ++++ + +
Sbjct: 62 --------------------------KSSDQRVEEVMTSSPVTVTADASVDECCTKMEDN 95
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ RRLPVVD GK GI+ + ++ R+A +
Sbjct: 96 QVRRLPVVDDKGKCCGIVAQADIARSAAE 124
>gi|440700922|ref|ZP_20883148.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440276455|gb|ELP64712.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 244
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG MTT E+ + T E +L + RI+G PV+D+D ++G++S+ DL+ +
Sbjct: 6 VGSVMTT--EVVRAEYGTPFKEVARLLADHRISGLPVVDEDDHVIGVISETDLM----VR 59
Query: 145 GSGRADNSMFPEVDSTWKTFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ D P ++ +K + G LMT PVV + AAR +
Sbjct: 60 QAATPDPYEPPRHGLGLAGLTRGARRQAAKEKARTAGQLMTEPPVVAHADDTIVQAARTM 119
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + RLPV+D + +LVGI+TR ++++ L+
Sbjct: 120 AQRRVERLPVLDEENRLVGIVTRRDLLQVFLR 151
>gi|336113964|ref|YP_004568731.1| hypothetical protein BCO26_1286 [Bacillus coagulans 2-6]
gi|335367394|gb|AEH53345.1| CBS domain containing membrane protein [Bacillus coagulans 2-6]
Length = 153
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM ++ VK TT+ E L++L RI G PV+D + KL+G+VSD D++ +
Sbjct: 3 VKDFMI--RDVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMVSDGDVIRF--LQ 58
Query: 145 GSGRADNSMFPE-VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R + V + + FNE KL + + + VR + E+A R+L
Sbjct: 59 PKARTVYDFYITIVVNEQEDFNE--KLAHSLDFPVEKIMKRRELYTVRPEDDFENALRIL 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVR 231
+ +++LPVV+ ++VG+I+RG+++R
Sbjct: 117 AKHHFKKLPVVNQADRVVGVISRGDIMR 144
>gi|393785532|ref|ZP_10373682.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salyersiae
CL02T12C01]
gi|392662287|gb|EIY55851.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salyersiae
CL02T12C01]
Length = 491
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKKGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE AA++L + K +LPVVD D
Sbjct: 154 D----------EVMTKDN-----------LVTTNQSTDLEAAAQILQKHKIEKLPVVDKD 192
Query: 218 GKLVGIITRGNVVRA 232
KL+G++T ++ +A
Sbjct: 193 NKLIGLVTYKDITKA 207
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TK+ L +T ++ A +IL + +I PV+D D KL+GLV+ D+
Sbjct: 154 DEVMTKDNLVTTNQSTDLEAAAQILQKHKIEKLPVVDKDNKLIGLVTYKDI 204
>gi|419602027|ref|ZP_14136612.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 151-9]
gi|380581892|gb|EIB03600.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 151-9]
Length = 484
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DGKLVGIIT 225
G+L G+IT
Sbjct: 187 QGRLEGLIT 195
>gi|419584401|ref|ZP_14120471.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 202/04]
gi|419592219|ref|ZP_14127518.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 37/05]
gi|380564195|gb|EIA87012.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 202/04]
gi|380566472|gb|EIA89108.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 37/05]
Length = 484
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DGKLVGIIT 225
G+L G+IT
Sbjct: 187 QGRLEGLIT 195
>gi|299132334|ref|ZP_07025529.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298592471|gb|EFI52671.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 242
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T++ EA +++E RI+G PV+D KLVG++++ D + I R + W
Sbjct: 18 TSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGTQTRR---------ARW 68
Query: 162 KTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
F G+ VG++M PV V E T+LE+ RL+ + +RLPVV
Sbjct: 69 LAFFVGPGRAATEFVHEQGRKVGEVMNAQPVTVTEQTSLEEIVRLMEKHNIKRLPVVRG- 127
Query: 218 GKLVGIITRGNVVR 231
+L+GI+TR +++R
Sbjct: 128 LQLLGIVTRTDLLR 141
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+MT P+ V E T+L +AA L+LE + LPVVD GKLVGIIT G+ VR A
Sbjct: 6 VMTRNPITVTEGTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRA 57
>gi|374636727|ref|ZP_09708281.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
gi|373558019|gb|EHP84386.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
Length = 153
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 13/144 (9%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
+V P + + + + E +I+G PV++D +LVG++S+ D++ +I+ + + P
Sbjct: 13 IVNPNDDIRDVIRLFREHKISGAPVVED-GELVGIISESDIVK--TITTHNESIGLILPS 69
Query: 157 --------VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
+ +T K E ++ + K V D+MT +V+ + +AA+L++E
Sbjct: 70 PLDLIELPLRTTLK-IEEFKEDIKKALKTKVKDVMTRDVIVISPDEGINNAAKLMIENNI 128
Query: 209 RRLPVVDADGKLVGIITRGNVVRA 232
+RLPVV DGKLVGI+TRG+++ A
Sbjct: 129 KRLPVV-KDGKLVGIVTRGDIIEA 151
>gi|419554900|ref|ZP_14093023.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2698]
gi|380531653|gb|EIA56670.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2698]
Length = 484
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DGKLVGIIT 225
G+L G+IT
Sbjct: 187 QGRLEGLIT 195
>gi|419541027|ref|ZP_14080250.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z163]
gi|419542397|ref|ZP_14081523.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2548]
gi|419548897|ref|ZP_14087509.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2685]
gi|419563363|ref|ZP_14100816.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1091]
gi|419566417|ref|ZP_14103677.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1148]
gi|419568949|ref|ZP_14106075.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1417]
gi|419574546|ref|ZP_14111276.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1891]
gi|419593635|ref|ZP_14128848.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9854]
gi|419596153|ref|ZP_14131161.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23341]
gi|419598540|ref|ZP_14133420.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23342]
gi|419612673|ref|ZP_14146546.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H9]
gi|419616952|ref|ZP_14150585.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z156]
gi|380515466|gb|EIA41630.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z163]
gi|380523246|gb|EIA48899.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2548]
gi|380526857|gb|EIA52285.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2685]
gi|380538304|gb|EIA62798.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1091]
gi|380544627|gb|EIA68645.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1417]
gi|380546649|gb|EIA70590.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1148]
gi|380549427|gb|EIA73252.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1891]
gi|380569738|gb|EIA92174.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9854]
gi|380576762|gb|EIA98809.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23341]
gi|380577099|gb|EIA99132.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23342]
gi|380589839|gb|EIB10876.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H9]
gi|380594641|gb|EIB15427.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z156]
Length = 484
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DGKLVGIIT 225
G+L G+IT
Sbjct: 187 QGRLEGLIT 195
>gi|419556713|ref|ZP_14094691.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 84-2]
gi|419563606|ref|ZP_14101005.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1098]
gi|419576009|ref|ZP_14112680.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1909]
gi|419576676|ref|ZP_14113245.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 59-2]
gi|419581395|ref|ZP_14117697.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1957]
gi|419582858|ref|ZP_14119051.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1961]
gi|380534463|gb|EIA59253.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 84-2]
gi|380543720|gb|EIA67892.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1098]
gi|380552181|gb|EIA75747.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1909]
gi|380559368|gb|EIA82527.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 59-2]
gi|380559554|gb|EIA82706.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1957]
gi|380564432|gb|EIA87239.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1961]
Length = 484
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DGKLVGIIT 225
G+L G+IT
Sbjct: 187 QGRLEGLIT 195
>gi|322420873|ref|YP_004200096.1| hypothetical protein GM18_3385 [Geobacter sp. M18]
gi|320127260|gb|ADW14820.1| CBS domain containing protein [Geobacter sp. M18]
Length = 217
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P +V EAL ++ EK+I PV+D KLVG+VSD DLL S + A
Sbjct: 16 PDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKASPSSATSLA---------- 65
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
W E+ LL+K V M + V E T LE+AAR++++ + LPV++ + K
Sbjct: 66 IW----EIHDLLAKLT---VEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVMNGE-K 117
Query: 220 LVGIITRGNVVRAALQIKHATEMGAQ 245
LVGIIT ++ + L++ G +
Sbjct: 118 LVGIITESDLFKTLLELLGGRRQGVR 143
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MT P+ + ++ +A RL+ E K RRLPVVD GKLVGI++ ++++A+
Sbjct: 2 LVRDRMTLNPITIIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKAS 57
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 75 SAAPSSGVYTVGDFMTT-------KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
S+A S ++ + D + +E+ V T ++EA I+V++RI G PV++ + K
Sbjct: 59 SSATSLAIWEIHDLLAKLTVEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVMNGE-K 117
Query: 128 LVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
LVG++++ DL L + G R + T +V K + + G +VG
Sbjct: 118 LVGIITESDLFKTLLELLGGRRQGVRITVSTTGAKGTLADVTKTIYEAGGNIVG 171
>gi|333911316|ref|YP_004485049.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751905|gb|AEF96984.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 153
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE- 156
V P + + + + E +I+G PV++D KLVG++S+ D++ +I+ + + P
Sbjct: 14 VNPDDDIRDVIRLFREHKISGAPVVED-GKLVGIISESDIVK--TITTHNESIGLILPSP 70
Query: 157 ---VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
++ KT E ++ + K V D+MT + + + DAA+L++E +R
Sbjct: 71 LDLIELPLKTTLKIEEFKEDIKKALKTKVKDVMTKDVITISPDETINDAAKLMIENNIKR 130
Query: 211 LPVVDADGKLVGIITRGNVVRA 232
LPVV+ +GKLVGI+TRG+++ A
Sbjct: 131 LPVVE-NGKLVGIVTRGDLIEA 151
>gi|78357089|ref|YP_388538.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219494|gb|ABB38843.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 150
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN--SMFP 155
V P + EA ++++E + G PV+DD KLVG++ DL+A + N S+F
Sbjct: 15 VAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLVA------QQKKVNLPSLFT 68
Query: 156 EVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+D K+ +++ + K V D MT P V T L++ A L++++KY LPV
Sbjct: 69 ILDGFIPLKSLSDMDSEMRKVAATRVSDAMTDNPATVTPDTPLDEVATLMVDSKYYTLPV 128
Query: 214 VDADGKLVGIITRGNVVR 231
V DG LVG++ + +V+R
Sbjct: 129 V-KDGILVGVVGKEDVLR 145
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
D+M+ PV V ++ +A +L+LE K+ LPVVD GKLVG++ + ++V
Sbjct: 6 DIMSADPVTVAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLV 55
>gi|365891727|ref|ZP_09430113.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365332295|emb|CCE02644.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 242
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ I+G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVDAANIMLQRHISGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + + L + ++ +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVAEVMTKSPLTITQDAALAEIVEIMERNHVKRLPVVKGD 128
Query: 218 GKLVGIITRGNVVRA 232
++VGI++R N+++A
Sbjct: 129 -QVVGIVSRSNLLQA 142
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHISGLPVVDASGKLVGVVSEGDFIR 55
>gi|330507501|ref|YP_004383929.1| CBS domain-containing protein [Methanosaeta concilii GP6]
gi|328928309|gb|AEB68111.1| CBS domain protein [Methanosaeta concilii GP6]
Length = 160
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD---NSMF 154
V+ + V EA +L E +I+G PV+D + +LVG+VS+ DLL L S+ S F
Sbjct: 14 VQASANVSEAARLLKENKISGMPVLDGE-RLVGIVSESDLLRLLSVEDESEGSLWLPSPF 72
Query: 155 PEVDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ ++ + +++ L + K V D+M+ + ++E+AA ++ + RL
Sbjct: 73 EIFEVPFRDLVKWERMRSSLKEIPEKEVADVMSRNLHEIGPDDSIEEAASIMTRHRINRL 132
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATE 241
PVV+ DG+LVGI+TRG+++ + L + HA +
Sbjct: 133 PVVE-DGRLVGIVTRGDII-SGLGMAHAED 160
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
V D+M PV V+ + N+ +AARLL E K +PV+D + +LVGI++ +++R
Sbjct: 3 VRDVMNVMPVSVQASANVSEAARLLKENKISGMPVLDGE-RLVGIVSESDLLR 54
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+ LH + P +++EA I+ RI PV++D +LVG+V+ D+ IS
Sbjct: 100 VADVMSRN--LHEIGPDDSIEEAASIMTRHRINRLPVVEDG-RLVGIVTRGDI-----IS 151
Query: 145 GSGRA 149
G G A
Sbjct: 152 GLGMA 156
>gi|402850829|ref|ZP_10899015.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
gi|402498839|gb|EJW10565.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
Length = 240
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT ++ PT TV + + L+E RI G PV+D+ +VG++ + DLL
Sbjct: 5 DIMTT--DVVTAAPTDTVHDVAKKLLEHRIGGLPVVDERSHVVGMIGENDLL-------- 54
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
R + S W F ++L+ K +G+ V D+M+ T + + ARL
Sbjct: 55 -RRAETGTDHTRSGWLQFLLGHEVLAAEFVKEHGRRVSDVMSVEVATATPDTPVGEIARL 113
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVR 231
L + R+P+VDA +LVGI+T ++VR
Sbjct: 114 LERHRVTRVPIVDASYRLVGIVTCADLVR 142
>gi|301064566|ref|ZP_07204962.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300441314|gb|EFK05683.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 149
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT E+ VK T + E EIL + RI G PV+DD+ L+G++ + DL+
Sbjct: 6 DIMTT--EVITVKKETPLKELAEILYKNRINGVPVVDDEGLLIGIICESDLV-------- 55
Query: 147 GRADNSM-FPEV----DSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
R D + P V D+ + ++ ++K + + N V +L + V V E T +++
Sbjct: 56 -RKDKKLHIPTVVALFDAVFYLESSKNIEKEIKRINATTVEELFSRKVVTVDEKTPIDEI 114
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
A ++ + K +PV+D + ++VG+I +G+V+R L
Sbjct: 115 ATIMTQKKVYTIPVMDGN-RMVGVIGKGDVIRTLL 148
>gi|339301021|ref|ZP_08650145.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|417005963|ref|ZP_11944533.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
gi|319745547|gb|EFV97849.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|341576144|gb|EGS26555.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
Length = 219
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
K LPVVD +G+L GIIT +V +A L+I
Sbjct: 103 SRKIGVLPVVD-NGQLYGIITDRDVFKAFLEI 133
>gi|452853043|ref|YP_007494727.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451896697|emb|CCH49576.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 224
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT E+ + P ++ +A +++ +K I+ PV+D++ K+VG+VSD D+
Sbjct: 3 VKNWMTA--EVVTITPDRSMMKASKLMKDKIISCVPVVDENGKIVGIVSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T +E+ LLS+ K D+MT +RE +E AA L+L
Sbjct: 54 ----KDAS--PSKATTLD-MHELYYLLSEIKIK---DIMTKKVTTIREDETVEKAAVLML 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
E ++ LPVVD + +VGIIT +V + ++I E G Q
Sbjct: 104 EGRFGSLPVVDENNVVVGIITDTDVFKVLVEISGIYEGGVQ 144
>gi|456386465|gb|EMF52001.1| hypothetical protein SBD_6523 [Streptomyces bottropensis ATCC
25435]
Length = 242
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TVGD MT +E+ T + + +L RI+G PV+D D K+VG+VS DL+
Sbjct: 9 IHTVGDVMT--DEVVQAHRETPFKDVVRLLDAHRISGMPVVDHDDKVVGVVSGTDLVRGQ 66
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ GR D + + + G+LM+ + V + +AAR
Sbjct: 67 AARADGRLDRRH-----RMPRLRRPGHRAAAGVFATTAGELMSTPAITVHPEQPVPEAAR 121
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++ RLPVVD + +L+GI TR +++R L+
Sbjct: 122 VMERHGIERLPVVDEEDRLIGIATRRDLLRVFLR 155
>gi|418054606|ref|ZP_12692662.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353212231|gb|EHB77631.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 246
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P + E L++++E+ I+G PV++ KLVG++++ D L +
Sbjct: 5 DIMTTG--VVSTTPECPLSEVLQVMLERHISGLPVVNASGKLVGVITEGD--CLRRVETG 60
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ ++ F +KL + +G+ V ++MT P+ + E T++ + L+
Sbjct: 61 TEIKRPLWRQL------FTGPEKLAQEYIRAHGRKVSEVMTADPITITEDTDVSEIIHLM 114
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++ +RLPV+ D +VGI++R NV+RA
Sbjct: 115 EKSRIKRLPVMRGDA-VVGIVSRANVIRA 142
>gi|419707528|ref|ZP_14235011.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
gi|383282678|gb|EIC80659.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
Length = 219
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM + + V P TTV A +I+ EK + PVI++D KLVGL+++ +
Sbjct: 3 VKDFMAKR--VVYVSPQTTVAAAADIMREKGLRRLPVIEND-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
AD S P +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 ----ADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|423226029|ref|ZP_17212495.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
cellulosilyticus CL02T12C19]
gi|392630886|gb|EIY24867.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
cellulosilyticus CL02T12C19]
Length = 491
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL----------RFVRDMNKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 193 GKLVGLITYKDITKA 207
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|338731014|ref|YP_004660406.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
gi|335365365|gb|AEH51310.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
Length = 148
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D M +L V P T++ L+I+ + ++G PV+ +D +++G + + D++ A+
Sbjct: 3 VSDVMV--RDLTAVTPDETIENVLKIMSSQLLSGVPVVSEDMRVIGFIGEDDIVKAVVPG 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S S P+++ +K N ++ K V M +VV E NL A L+
Sbjct: 61 YFSLLQSASFLPDINQLFKNLNLIKD-------KPVSQFMRSPALVVNENANLMHVADLM 113
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ R + VVD G+LVG++ R N+++A
Sbjct: 114 IKNNVRVIAVVDDFGRLVGVVNRMNILQAV 143
>gi|189463688|ref|ZP_03012473.1| hypothetical protein BACINT_00019 [Bacteroides intestinalis DSM
17393]
gi|189438638|gb|EDV07623.1| inosine-5'-monophosphate dehydrogenase [Bacteroides intestinalis
DSM 17393]
Length = 491
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL----------RFVRDMNKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 193 GKLVGLITYKDITKA 207
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|170289451|ref|YP_001739689.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|170176954|gb|ACB10006.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
Length = 215
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ D+ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
E LPVVD G LVGIIT+ ++ + ++I
Sbjct: 103 EKDISGLPVVDDAGHLVGIITQTDIFKVFVEI 134
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MT P+ + T+ +A +L+ + K +RL +V D K+VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKDEKIVGIVTEKDLLYAS 56
>gi|297197540|ref|ZP_06914937.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715588|gb|EDY59622.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 234
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS--GRADNSMFPEVDS 159
T E +L + RI+G PV+D+D K++G++S+ DL+ + + G P +
Sbjct: 12 TPFKEVARLLADHRISGLPVVDEDDKVIGVISETDLVVRQAATPDPFGPPRRRWLPALTR 71
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ ++ +K + G LMT PV V ++ +AAR + + RLPV+D + +
Sbjct: 72 S------ARQQAAKVEARTAGRLMTEPPVTVHADDSIVEAARTMAQRCVERLPVLDEEHR 125
Query: 220 LVGIITRGNVVRAALQ 235
LVGI+TR ++++ L+
Sbjct: 126 LVGIVTRRDLLQVFLR 141
>gi|424886817|ref|ZP_18310425.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393176168|gb|EJC76210.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 223
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + + P +V A +++ ++ ++G PV+D D ++G++S+ DL+ +S
Sbjct: 3 VKDVMTTT--VVTLSPDNSVRHAAKLMSDQHVSGVPVVDHDGCVLGVISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+AD + P D F K VGD+MTP PVV+ E L A
Sbjct: 61 NGAFVLKADMGLGP--DDRANAF-------IKRCAWRVGDVMTPDPVVIDEEAPLFRVAV 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
L+ + +R+PV+ DGKLVGI++R ++++
Sbjct: 112 LMQDRGIKRIPVL-RDGKLVGIVSRADLLQ 140
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V + ++ AA+L+ + +PVVD DG ++G+I+ G+++R
Sbjct: 2 LVKDVMTTTVVTLSPDNSVRHAAKLMSDQHVSGVPVVDHDGCVLGVISEGDLIR 55
>gi|381210106|ref|ZP_09917177.1| CBS domain containing membrane protein [Lentibacillus sp. Grbi]
Length = 155
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ DFM T ++ V+ + + L+ LVE +I G PV+D++ +L+G++SD D++ +
Sbjct: 3 IQDFMIT--DVISVQEDIKIKDLLKTLVEHKIGGVPVVDENARLIGMISDGDVIRY--LQ 58
Query: 145 GSGRADNSMFPEVDSTWKT--FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
GR F V T K N+++ + + ++V V +E+A L
Sbjct: 59 PDGRTIYDAFSMVFITEKEGLRNKIETSIEHHSSEIV----KKNVYAVHPDDEIEEALSL 114
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
L ++++PVVDA K+VG+++RG+++R+
Sbjct: 115 LSRYHFKKIPVVDASNKVVGVVSRGDIIRSV 145
>gi|386819034|ref|ZP_10106250.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
gi|386424140|gb|EIJ37970.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
Length = 153
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 26/152 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + L + KP ++ E +E+ ++ RI+G PV D++ LVG++S+ D + IS
Sbjct: 23 VEDYMT--KNLVLFKPDQSILEVMELFLKHRISGGPVCDENGHLVGIISEAD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN +L K V + MT + N+ DAA
Sbjct: 79 ES---------------RYFN--MPILDKN----VENFMTRDVETIPHDMNIFDAASRFY 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ RRLPV+D GKLVG I+R ++V AAL++
Sbjct: 118 KGHRRRLPVMDH-GKLVGQISRKDIVVAALKL 148
>gi|408490629|ref|YP_006866998.1| CBS_pair domain superfamily protein [Psychroflexus torquis ATCC
700755]
gi|408467904|gb|AFU68248.1| CBS_pair domain superfamily protein [Psychroflexus torquis ATCC
700755]
Length = 157
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 26/154 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + + + ++ E +EIL++ R++G PV+DD +++G++S+ D + I
Sbjct: 22 TVRDCMS--QNMILFNKAQSIIEVVEILIKFRVSGGPVVDDQKRVIGIISEGD--CVKQI 77
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S S R N +V V+K +SK ++ T +P V +L DAA L
Sbjct: 78 SES-RYYNMPMEDVS--------VEKYMSK-------EVNTISPDV-----SLFDAANLF 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
L++K RR PVV+ D +++GI+++ +++RAAL +K
Sbjct: 117 LKSKRRRFPVVEND-RIIGIVSQKDILRAALMLK 149
>gi|297568229|ref|YP_003689573.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924144|gb|ADH84954.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 150
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E+ V P V++ +L E+RI+G PV+D+ +LVG+V++ DL+
Sbjct: 6 DIMTA--EVITVSPDLPVEKLASLLWERRISGAPVVDEQGELVGVVTESDLI-------- 55
Query: 147 GRADNSMFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+A P + + +V++ L+K G V D+ T P V T L++ A
Sbjct: 56 DQAKKLHIPTAIAVLEAVIYLERGRKVEEELNKMAGSTVKDICTTKPATVAPDTPLDEIA 115
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++ E LPV+D GKLVG++ + +V+RA +
Sbjct: 116 TVMAEKHLHTLPVMDR-GKLVGVVGKADVIRALIN 149
>gi|374984112|ref|YP_004959607.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
gi|297154764|gb|ADI04476.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
Length = 224
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 22/157 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTV--DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
TVG+ MT +VV+ + E +E+L E +T PV+D +G+VS+ DLL
Sbjct: 5 TVGELMTR----NVVRAPRELPFKEIVELLAENDVTAVPVVDGSGHPIGVVSEADLLR-- 58
Query: 142 SISGSGRADNS---MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
SG+AD S P +++ W+ +KT G +LM+ V R ++ +
Sbjct: 59 --KSSGQADPSGRVPIPHLEA-WER--------AKTEGTRAEELMSAPAVCARPEWSVVE 107
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
AARL+ +RLPVVD +L+GII+R +++R L+
Sbjct: 108 AARLMAVQGVKRLPVVDETDRLLGIISRADLLRIFLR 144
>gi|295681503|ref|YP_003610077.1| XRE family transcriptional regulator [Burkholderia sp. CCGE1002]
gi|295441398|gb|ADG20566.1| putative transcriptional regulator, XRE family [Burkholderia sp.
CCGE1002]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT ++ + P ++V +A ++L + +I+G PV+DD ++G+VS+ DLL +G+
Sbjct: 5 DIMTT--QVVSIAPDSSVYDAAKLLADSKISGMPVLDDTGSVIGIVSEGDLLRRVE-TGT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
S + + + V+ L K V D+M+ V V E+ L A LL
Sbjct: 62 ETPRRSWLAQFIAPTRQLA-VEYL--KERSIRVRDVMSAPAVTVDESAPLTAVAELLGRK 118
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+RLPV+ DGKLVGI++R N+VRA
Sbjct: 119 HIKRLPVL-RDGKLVGIVSRANLVRA 143
>gi|421601459|ref|ZP_16044253.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
gi|404266431|gb|EJZ31317.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
Length = 242
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+D+ +LVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDETGRLVGIVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT + V + E T L + L+ +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRRVSEVMTESVVTITEDTALAEIVDLMERNNVKRLPVVRGD 128
Query: 218 GKLVGIITRGNVVRA 232
K+VGI++R N+++A
Sbjct: 129 -KVVGIVSRANLLQA 142
>gi|441146155|ref|ZP_20964045.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620734|gb|ELQ83759.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 242
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P E ++L I+G PV+D D K++G+VS+ DL++ + R D++ P
Sbjct: 19 PEVPFKEVADLLARHAISGVPVVDRDDKVLGVVSETDLMS----HQAARDDDAPRPWYAL 74
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ + +K G+ GDLMT V + + +AAR + + RLPV+D +G+
Sbjct: 75 R-RRAKSARAARTKAGGRTAGDLMTSPAVTIGPRRTVAEAARTMAAHRVERLPVIDEEGR 133
Query: 220 LVGIITRGNVV 230
L+GI+TR +++
Sbjct: 134 LMGIVTRSDLL 144
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
+G T GD MT+ + P TV EA + R+ PVID++ +L+G+V+ DLL
Sbjct: 87 KAGGRTAGDLMTSPAV--TIGPRRTVAEAARTMAAHRVERLPVIDEEGRLMGIVTRSDLL 144
Query: 139 AL 140
++
Sbjct: 145 SV 146
>gi|119717867|ref|YP_924832.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
gi|119538528|gb|ABL83145.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
Length = 500
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 31/148 (20%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ ++ E RI+GFPV+D D +L+G++++ DL F V
Sbjct: 103 IGPDATLEQLDQLAGEYRISGFPVVDADNRLLGIITNRDL---------------RFTPV 147
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+ W T V ++MTP P++ + EDA LL + K RLP+VDA
Sbjct: 148 -AEWATTK-------------VDEVMTPMPLITAPPDISREDATLLLRQHKRERLPLVDA 193
Query: 217 DGKLVGIITRGNVVRAALQIKHATEMGA 244
G+L G+IT + V++ Q HA++ GA
Sbjct: 194 QGRLAGLITVKDFVKSE-QFPHASKDGA 220
>gi|156742804|ref|YP_001432933.1| hypothetical protein Rcas_2844 [Roseiflexus castenholzii DSM 13941]
gi|156234132|gb|ABU58915.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 428
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 9/159 (5%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T+ + P TV D M+ ++ V+P T + +E+L+++ + PV+D + ++VG+
Sbjct: 108 TSRAVGPFPAHLTVADIMS--RQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRVVGI 165
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
++D DLL G+ ++ E+ S + V+ L + + DLMTP PV +
Sbjct: 166 ITDGDLLT----RGATELPLALQREL-SLAERAAAVEILAERPH--TAADLMTPDPVTLP 218
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
TT L +AA ++ + +R+PVVD +LVG+++R +++
Sbjct: 219 MTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLL 257
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 73 ANSAAPSSGV-YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
A PS G TVGD M T + V+P T + E L+ L+E V+D+ +VG+
Sbjct: 269 AEPVVPSGGAPQTVGDIMMTG--IPTVRPDTPLAETLDHLLETDKRRVVVVDEHHHVVGI 326
Query: 132 VSDYDLL---ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
+SD D+L A SG+ RA + F L G+ D+MT V
Sbjct: 327 ISDGDVLRRAAKRVRSGALRALAAWF-------GGGARPPGLEVAAEGRTAADVMTSPVV 379
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ + +A RL++ K +R+PVVDAD + VG++ R V+ A
Sbjct: 380 TLPADAPITEAVRLMMTHKIKRIPVVDADKRFVGMVGRAGVLAA 423
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 83 YTVGDFMTTKEELHVVKPTTT-VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+T D MT V P TT + EA I+ ++ + PV+D+ +LVG+VS YDLL+
Sbjct: 204 HTAADLMTPDP---VTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLLSTV 260
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ R + P S + VGD+M VR T L +
Sbjct: 261 AEGLRQRPAEPVVP----------------SGGAPQTVGDIMMTGIPTVRPDTPLAETLD 304
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
LLET RR+ VVD +VGII+ G+V+R A
Sbjct: 305 HLLETDKRRVVVVDEHHHVVGIISDGDVLRRA 336
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 166 EVQKLLSKTNGKM-----VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
EV K S+ G V D+M+ V VR T + LL++ R PVVDA+ ++
Sbjct: 103 EVLKYTSRAVGPFPAHLTVADIMSRQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRV 162
Query: 221 VGIITRGNVV-RAALQIKHATE 241
VGIIT G+++ R A ++ A +
Sbjct: 163 VGIITDGDLLTRGATELPLALQ 184
>gi|427385456|ref|ZP_18881763.1| inosine-5'-monophosphate dehydrogenase [Bacteroides oleiciplenus
YIT 12058]
gi|425727100|gb|EKU89961.1| inosine-5'-monophosphate dehydrogenase [Bacteroides oleiciplenus
YIT 12058]
Length = 491
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDEKYLVGIVTNRDL----------RFVRDMDKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 193 GKLVGLITYKDITKA 207
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|92117441|ref|YP_577170.1| hypothetical protein Nham_1902 [Nitrobacter hamburgensis X14]
gi|91800335|gb|ABE62710.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
X14]
Length = 231
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV + +IL+EKRI+ PV+D+ K++G+V++ DL+ +G+ R S W
Sbjct: 19 TVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLMHRAE-AGTERPY--------SWWV 69
Query: 163 TFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
F ++ K++ + D+MT V T L + A L E + +R+P+V+ DG
Sbjct: 70 HFLAGDATMAADYVKSHATRIEDVMTTDVVTATPETLLHEIAMLFEERQIKRVPIVNNDG 129
Query: 219 KLVGIITRGNVVRAALQIKHATEM 242
LVGI++R N+++A + EM
Sbjct: 130 DLVGIVSRANLIQAVASARPKLEM 153
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+M + V + + D A++LLE + +PVVD GK++GI+T +++ A
Sbjct: 5 DVMVSPVITVGKIATVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLMHRA 57
>gi|160890575|ref|ZP_02071578.1| hypothetical protein BACUNI_03018 [Bacteroides uniformis ATCC 8492]
gi|317479883|ref|ZP_07939000.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
gi|423304002|ref|ZP_17282001.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T00C23]
gi|423307274|ref|ZP_17285264.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T12C37]
gi|156859574|gb|EDO53005.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis ATCC
8492]
gi|316903957|gb|EFV25794.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
gi|392685930|gb|EIY79238.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T00C23]
gi|392690526|gb|EIY83789.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T12C37]
Length = 491
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKD 192
Query: 218 GKLVGIITRGNVVRA 232
KLVG+IT ++ +A
Sbjct: 193 NKLVGLITYKDITKA 207
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|22537717|ref|NP_688568.1| AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76786880|ref|YP_330197.1| hypothetical protein SAK_1593 [Streptococcus agalactiae A909]
gi|76799160|ref|ZP_00781343.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|406709961|ref|YP_006764687.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
gi|424048975|ref|ZP_17786526.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|22534606|gb|AAN00441.1|AE014263_20 AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76561937|gb|ABA44521.1| CBS domain protein [Streptococcus agalactiae A909]
gi|76585490|gb|EAO62065.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|389649597|gb|EIM71074.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|406650846|gb|AFS46247.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
K LPVVD +G+L GI+T +V +A L+I
Sbjct: 103 SRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|322373958|ref|ZP_08048493.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
gi|321277330|gb|EFX54400.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM + + V P TTV A +I+ EK + PVI++D KLVGL+++ +
Sbjct: 3 VKDFMAKR--VVYVSPQTTVAAAADIMREKGLRRLPVIEND-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
AD S P +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 ----ADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 KNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLKNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L+S N
Sbjct: 134 SGYGQAGIRIGLEVLDTPRVLEKIANLISSEN 165
>gi|290769657|gb|ADD61437.1| putative protein [uncultured organism]
Length = 491
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKD 192
Query: 218 GKLVGIITRGNVVRA 232
KLVG+IT ++ +A
Sbjct: 193 NKLVGLITYKDITKA 207
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|317151879|ref|YP_004119927.1| hypothetical protein Daes_0154 [Desulfovibrio aespoeensis Aspo-2]
gi|316942130|gb|ADU61181.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 224
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT E + + P ++ +A +++ + I+ PV+D+ ++ G+VSD D+
Sbjct: 3 VKNWMT--ENVVTITPERSMMKASKLMKDHGISRLPVVDESGRIAGIVSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T +E+ LLS+ + D+MT +R+ +E AA L+L
Sbjct: 54 ----KDAS--PSKATTLD-MHELYYLLSEVK---IKDIMTKKVTTIRDDETVEKAAVLML 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
E + LPVVD DGK+VGIIT ++ + ++I E G Q
Sbjct: 104 EGNFGGLPVVDGDGKVVGIITDTDIFKVLVEISGVYEGGVQ 144
>gi|270295712|ref|ZP_06201912.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
gi|270273116|gb|EFA18978.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
Length = 491
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKD 192
Query: 218 GKLVGIITRGNVVRA 232
KLVG+IT ++ +A
Sbjct: 193 NKLVGLITYKDITKA 207
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|188584946|ref|YP_001916491.1| hypothetical protein Nther_0305 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349633|gb|ACB83903.1| CBS domain containing membrane protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 147
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS-ISG 145
D M+T ++ V P +TV+EA +++ ++ I+G PVI+ LVG++++ DLL IS
Sbjct: 5 DIMST--DIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRISP 62
Query: 146 SGRAD---NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + +F E S + F +++K ++ V DLM+ V V +E+ A
Sbjct: 63 PGYIEFLGGIVFTE--SQDEFFEQLRKYVA----TQVKDLMSDQVVTVGPEAGIEEIATT 116
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ + +RLPVV +GKL+GI++R ++++A L
Sbjct: 117 MDQKNVKRLPVV-GEGKLLGIVSRADLLKALL 147
>gi|281423986|ref|ZP_06254899.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
gi|281401911|gb|EFB32742.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
Length = 494
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ +TV +ALE++ + I G PV+DDD KLVG+V++ DL R + M ++
Sbjct: 105 IRRGSTVKDALELMHDYHIGGIPVVDDDNKLVGIVTNRDL----------RFERRMDKKI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V + T+L AA++L E K +LPVVD +
Sbjct: 155 D----------EVMTKEN-----------LVTTHQQTDLVAAAQILQENKIEKLPVVDKN 193
Query: 218 GKLVGIITRGNVVRA 232
+LVG+IT ++ +A
Sbjct: 194 NRLVGLITYKDITKA 208
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
M PV +R + ++DA L+ + +PVVD D KLVGI+T
Sbjct: 98 MIYDPVTIRRGSTVKDALELMHDYHIGGIPVVDDDNKLVGIVT 140
>gi|345021259|ref|ZP_08784872.1| CBS domain containing membrane protein [Ornithinibacillus
scapharcae TW25]
Length = 157
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V +FM T ++ +K T++ E LEILV RI G PV+D + KLVG+VSD D++ +
Sbjct: 3 VKEFMIT--DVISIKENTSIKELLEILVSYRIGGVPVVDSNNKLVGVVSDGDVIRYLKPN 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV--GDLMTPAPVVVRETTNLEDAARL 202
D V K +++Q L K M+ D+ T + L+DA RL
Sbjct: 61 SQTVFDMFSIVMVSEPEKLTDKLQYALEKPVSIMMKRKDIKT-----IDAECELDDALRL 115
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVR 231
+ ++++PV+D ++G+I+RG+++R
Sbjct: 116 FSKYHFKKIPVLDNTETVIGVISRGDLLR 144
>gi|168182191|ref|ZP_02616855.1| CBS domain protein [Clostridium botulinum Bf]
gi|170761474|ref|YP_001785527.1| hypothetical protein CLK_3378 [Clostridium botulinum A3 str. Loch
Maree]
gi|237793518|ref|YP_002861070.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
gi|169408463|gb|ACA56874.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
gi|182674627|gb|EDT86588.1| CBS domain protein [Clostridium botulinum Bf]
gi|229262990|gb|ACQ54023.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
Length = 138
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 34/157 (21%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + V +V++A E++ E + P+ D++ K+VG+++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAELMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVA 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+DN++ VGD+MT PVV + ++ DAAR++
Sbjct: 59 KG--SDNNI------------------------KVGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
E + RRLPV D + +VGI++ G++ A++ KH E
Sbjct: 93 ERQIRRLPVED-NQNIVGIVSLGDI---AIEPKHENE 125
>gi|77408331|ref|ZP_00785073.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|421148102|ref|ZP_15607774.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
gi|77173094|gb|EAO76221.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|401685440|gb|EJS81448.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
K LPVVD +G+L GI+T +V +A L+I
Sbjct: 103 SRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|383762105|ref|YP_005441087.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382373|dbj|BAL99189.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 286
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ T + E +L I+G PV+D+ KLVG+V+D+DL+ ++ R + +
Sbjct: 14 VRTDTRIPEVARLLRAHDISGMPVLDETGKLVGVVTDHDLILRNAPIREPRYFAVLSGYI 73
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + ++ L T GD++ P V T LE+A L+L + LPV+D +
Sbjct: 74 PLNLEEYRHYREQLRHTMAVTAGDMVEPDIPTVTPDTPLEEAMELMLNPQVTILPVLD-E 132
Query: 218 GKLVGIITRGNVVRAALQIKHATE 241
G++VG++TR ++VR Q++ A +
Sbjct: 133 GEVVGVVTRTDLVRLIEQLEGAVD 156
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
V D+M+ + VR T + + ARLL +PV+D GKLVG++T +++
Sbjct: 2 FVRDIMSSPAITVRTDTRIPEVARLLRAHDISGMPVLDETGKLVGVVTDHDLI 54
>gi|149369518|ref|ZP_01889370.1| CBS domain protein, putative [unidentified eubacterium SCB49]
gi|149356945|gb|EDM45500.1| CBS domain protein, putative [unidentified eubacterium SCB49]
Length = 154
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+ L P +V E + +L++K+I+G PV++D +L+G++S+ D + IS
Sbjct: 23 VSDYMS--RNLTTFSPDQSVMEVMSVLIKKKISGGPVVNDKNELLGIISEGD--CMKEIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S R N +V V D M A + N+ DAA L
Sbjct: 79 NS-RYHNHPIQDVK--------------------VQDHMVTAVETLDGNMNVFDAADKFL 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
++ RR P+++ +GKLVGII++ +V++AA+ +K T
Sbjct: 118 SSRRRRFPILE-NGKLVGIISQKDVLKAAIAMKGQT 152
>gi|333376766|ref|ZP_08468502.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas mossii DSM
22836]
gi|332885979|gb|EGK06223.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas mossii DSM
22836]
Length = 491
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 33/131 (25%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV AL ++ E +I G PV+D + +LVG+V++ DL +
Sbjct: 109 TVGHALAMMAEYKIGGIPVVDTNNRLVGIVTNRDL---------------------RFRR 147
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDADGKLV 221
NE ++ D+MT ++ R+TT+LE AA +L + K +LPVVD+D KL+
Sbjct: 148 DMNE-----------LIDDVMTKENIITTRQTTDLEAAADILQQHKIEKLPVVDSDNKLI 196
Query: 222 GIITRGNVVRA 232
G+IT ++ +A
Sbjct: 197 GLITYKDITKA 207
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + + TT ++ A +IL + +I PV+D D KL+GL++ D+
Sbjct: 154 DDVMTKENIITTRQTTDLEAAADILQQHKIEKLPVVDSDNKLIGLITYKDI 204
>gi|77411390|ref|ZP_00787737.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|410594961|ref|YP_006951688.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
gi|421532751|ref|ZP_15979100.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|77162563|gb|EAO73527.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|403641979|gb|EJZ02880.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|410518600|gb|AFV72744.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
K LPVVD +G+L GI+T +V +A L+I
Sbjct: 103 SRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|385675865|ref|ZP_10049793.1| hypothetical protein AATC3_08107 [Amycolatopsis sp. ATCC 39116]
Length = 195
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EA IL + T PV+DDD +LVG+V++ DL+A
Sbjct: 8 VTPGTSAKEAARILSSRGFTALPVVDDDERLVGIVTEADLVA------------------ 49
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D + + + G V ++MT + T+L +R LL+ + R +P+ +
Sbjct: 50 DRLPRDPRTHEDRTDRAPGATVAEVMTSPATAMSPGTDLATLSRALLDARIRAMPIAEG- 108
Query: 218 GKLVGIITRGNVVR 231
G++VGI+TRG++VR
Sbjct: 109 GQVVGIVTRGDIVR 122
>gi|148270727|ref|YP_001245187.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281413032|ref|YP_003347111.1| hypothetical protein Tnap_1625 [Thermotoga naphthophila RKU-10]
gi|147736271|gb|ABQ47611.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281374135|gb|ADA67697.1| CBS domain containing protein [Thermotoga naphthophila RKU-10]
Length = 215
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ D+ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKNVVTVNENAPIEDAARIME 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
E LPVVD G+LVGIIT+ ++ + ++I
Sbjct: 103 EKDISGLPVVDDAGRLVGIITQTDIFKVFVEI 134
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MT P+ + T+ +A +L+ + K +RL +V D K+VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKDEKIVGIVTEKDLLYAS 56
>gi|421591912|ref|ZP_16036684.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
gi|403702494|gb|EJZ19048.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
Length = 219
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MTTK + + P +V A+ I+++ ++G PV+DD ++ GLV++ DLL + + R
Sbjct: 1 MTTK--VVSISPAVSVRHAVAIMLQNHVSGLPVVDDQERVCGLVTEGDLLLRREVRLAPR 58
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
+ + PE+ S ++++ + +NG V D+M+ +V R + + D A L +
Sbjct: 59 SARA--PELISEI----DLERYIC-SNGWCVADVMSRDVIVARPDSEVSDIAESLQVHRI 111
Query: 209 RRLPVVDADGKLVGIITRGNVVR 231
+RLP+V+ + +LVGI++R +++R
Sbjct: 112 KRLPIVEEE-RLVGIVSRRDILR 133
>gi|77406654|ref|ZP_00783697.1| AcuB family protein [Streptococcus agalactiae H36B]
gi|77174726|gb|EAO77552.1| AcuB family protein [Streptococcus agalactiae H36B]
Length = 219
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
K LPVVD +G+L GI+T +V +A L+I
Sbjct: 103 SRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|269126276|ref|YP_003299646.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
gi|268311234|gb|ACY97608.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
Length = 227
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT E + V+ T E +E++ E RI PV+D D +++G+VS+ DLL
Sbjct: 6 VQELMT--ENVVSVRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDLLHKQEFG 63
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G R + + + ++ +K LMT + V +AAR++
Sbjct: 64 GPRRTPSGLLGALRR--------RRAQAKAGAVNARGLMTTPVITVSPQATAAEAARIMA 115
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
K +LPV D DG+LVGI+ R +V+R L+
Sbjct: 116 RHKVDQLPVTDDDGRLVGIVARSDVLRVFLR 146
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 175 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
G+ V +LMT V VR T + L+ E + +PVVDAD +++GI++ +++
Sbjct: 2 KGRRVQELMTENVVSVRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDLL---- 57
Query: 235 QIKHATEMGA 244
H E G
Sbjct: 58 ---HKQEFGG 64
>gi|156743706|ref|YP_001433835.1| hypothetical protein Rcas_3778 [Roseiflexus castenholzii DSM 13941]
gi|156235034|gb|ABU59817.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 225
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 23/156 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T V+ PTTT+ EA ++ ++RI PV+++ KL+G+++ DL A
Sbjct: 6 VADWMSTPAI--VIAPTTTLAEAQRLMEQRRIRRLPVVENG-KLIGIITRGDLRAAQP-- 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
AD ++ ++ E + LL + V + MT V + + DAARL+L
Sbjct: 61 ----ADTTL---------SYYEWRALLDRVT---VVECMTRHVVTITPDASALDAARLML 104
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
K LPVVD +G+++GIIT ++ R LQI AT
Sbjct: 105 TYKIGGLPVVDDEGRVIGIITESDLFR--LQIALAT 138
>gi|423283056|ref|ZP_17261941.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
615]
gi|404581330|gb|EKA86029.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
615]
Length = 491
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE A+++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHKIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKL+G++T ++ +A
Sbjct: 193 GKLIGLVTYKDITKA 207
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-------LA 139
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+ +A
Sbjct: 154 DEVMTKENLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDITKAKDKPMA 213
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
G R + V T TF+ +Q L+ D T A V+ + +
Sbjct: 214 CKDSKGRLR----VAAGVGVTADTFDRMQALV---------DAGTDAIVIDTAHGHSKGV 260
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
L E K +R P +D +VG I G+ +A ++
Sbjct: 261 IDTLREAK-KRYPDIDI---VVGNIATGDAAKALVE 292
>gi|53715359|ref|YP_101351.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
gi|60683328|ref|YP_213472.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis NCTC
9343]
gi|265767846|ref|ZP_06095378.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
gi|375360136|ref|YP_005112908.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis 638R]
gi|383119913|ref|ZP_09940650.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
gi|423252208|ref|ZP_17233210.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T00C08]
gi|423252528|ref|ZP_17233459.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T12C07]
gi|423261244|ref|ZP_17242145.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T00C01]
gi|423267769|ref|ZP_17246749.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T12C05]
gi|423272322|ref|ZP_17251290.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T00C42]
gi|423276778|ref|ZP_17255710.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T12C13]
gi|52218224|dbj|BAD50817.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
gi|60494762|emb|CAH09568.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis NCTC 9343]
gi|251944079|gb|EES84598.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
gi|263252518|gb|EEZ24046.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
gi|301164817|emb|CBW24377.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis 638R]
gi|387774396|gb|EIK36508.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T00C01]
gi|392647820|gb|EIY41517.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T00C08]
gi|392660604|gb|EIY54213.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T12C07]
gi|392695514|gb|EIY88726.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T00C42]
gi|392695990|gb|EIY89194.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T12C13]
gi|392696028|gb|EIY89230.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T12C05]
Length = 491
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE A+++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHKIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKL+G++T ++ +A
Sbjct: 193 GKLIGLVTYKDITKA 207
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|414164101|ref|ZP_11420348.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
gi|410881881|gb|EKS29721.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
Length = 242
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T++ EA +++E RI+G PV+D KLVG++++ D + I +
Sbjct: 14 VTEDTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGTQTKR-------- 65
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W F G+ VG++M PV V E T+LE+ RL+ + +RLPV
Sbjct: 66 -ARWLAFFVGPGRAATEFVHEQGRKVGEVMNSRPVTVTELTSLEEVVRLMEKHNIKRLPV 124
Query: 214 VDADGKLVGIITRGNVVR 231
V +L+GI+TR +++R
Sbjct: 125 VRG-MQLLGIVTRTDLLR 141
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238
V +MT P+ V E T+L +AA L+LE + LPVVD GKLVGIIT G+ VR A
Sbjct: 3 VHQVMTRNPITVTEDTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRA----- 57
Query: 239 ATEMGAQ 245
E+G Q
Sbjct: 58 --EIGTQ 62
>gi|313676663|ref|YP_004054659.1| cbs domain containing protein [Marivirga tractuosa DSM 4126]
gi|312943361|gb|ADR22551.1| CBS domain containing protein [Marivirga tractuosa DSM 4126]
Length = 156
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 26/149 (17%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V D+M T L T+ EA++IL++K+I+G PV+D++ L+G++S+ D L + +
Sbjct: 23 SVKDYMATN--LITFNEHQTIYEAMDILMKKKISGGPVVDENNNLIGVISEGDCLK-EIV 79
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G +N KL +V D M + + TN+ +AA +
Sbjct: 80 KGK-----------------YNNSPKLPG-----LVKDYMATNVIHIDPETNIFEAANMF 117
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
L ++RR PV+ +GKL+G I++ +++RA
Sbjct: 118 LRMRFRRFPVL-KEGKLIGQISQRDIMRA 145
>gi|15643897|ref|NP_228946.1| hypothetical protein TM1140 [Thermotoga maritima MSB8]
gi|418044700|ref|ZP_12682796.1| CBS domain containing protein [Thermotoga maritima MSB8]
gi|4981687|gb|AAD36216.1|AE001771_9 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351677782|gb|EHA60929.1| CBS domain containing protein [Thermotoga maritima MSB8]
Length = 215
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 20/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ ++ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
E LPVVD G+LVGIIT+ ++ + ++I
Sbjct: 103 EKDISGLPVVDDAGRLVGIITQTDIFKVFVEI 134
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MT P+ + T+ +A +L+ + K +RL +V + K+VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKNEKIVGIVTEKDLLYAS 56
>gi|383764645|ref|YP_005443627.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384913|dbj|BAM01730.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 209
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 17/146 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T EAL+++ +++ PV+D K+VG+VS+ DLL + S+
Sbjct: 8 ISPDTPFQEALKLMRDRKFRRLPVVDATGKIVGIVSERDLL-----HAAPSPATSL---- 58
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S W EV LL K V D+MT V + + +EDAA L++ K LPVVD
Sbjct: 59 -SVW----EVNYLLWKLK---VSDIMTRNVVTINQNMPIEDAASLMVTRKIGGLPVVDDG 110
Query: 218 GKLVGIITRGNVVRAALQIKHATEMG 243
G +VG+IT ++ +A +++ E G
Sbjct: 111 GAIVGVITETDIFKAFVEMLGGGEHG 136
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
MT V + T ++A +L+ + K+RRLPVVDA GK+VGI++ +++ AA
Sbjct: 1 MTSPAVTISPDTPFQEALKLMRDRKFRRLPVVDATGKIVGIVSERDLLHAA 51
>gi|239616754|ref|YP_002940076.1| CBS domain containing membrane protein [Kosmotoga olearia TBF
19.5.1]
gi|239505585|gb|ACR79072.1| CBS domain containing membrane protein [Kosmotoga olearia TBF
19.5.1]
Length = 150
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+++ + + K TG PV+D+++++VG +S+ D+ I S + +
Sbjct: 19 TIEDFIITCLRKMRTGLPVVDEEFRVVGFISESDV-----IKSSLPSYFELLQSASFIPD 73
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
T V++L N + +++PA + V+ L +AA LL++ + LPVVD D KLVG
Sbjct: 74 THQFVRRLGDIRNDPIASHMVSPA-IAVKPDDTLINAADLLIKKGLKTLPVVDDDHKLVG 132
Query: 223 IITRGNVVRAALQ 235
IITR N++ +ALQ
Sbjct: 133 IITRLNLIYSALQ 145
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VKP T+ A ++L++K + PV+DDD KLVG+++ +L+
Sbjct: 100 VKPDDTLINAADLLIKKGLKTLPVVDDDHKLVGIITRLNLI 140
>gi|336412095|ref|ZP_08592553.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_56FAA]
gi|335939267|gb|EGN01144.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_56FAA]
Length = 491
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE A+++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHKIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKL+G++T ++ +A
Sbjct: 193 GKLIGLVTYKDITKA 207
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|260584956|ref|ZP_05852700.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
gi|260157386|gb|EEW92458.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
Length = 213
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 20/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T L V+PTTTV +AL+++ E + PV++ D KLVGL++ +L+A +S S
Sbjct: 3 VKDYMSTN--LITVEPTTTVMKALDLMKEHDVHRLPVVEGD-KLVGLLT-AELVAQNSPS 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ T + +E+ LL+KT K D+M + V+ T LE+AA ++
Sbjct: 59 MA-------------TSLSVHELNYLLNKTTAK---DIMLKQVITVKPTAVLEEAASIMR 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ LPV+++ G LVGIIT +++ A + I
Sbjct: 103 QQGIGVLPVLESRGNLVGIITDKDIMDAFIDI 134
>gi|325959812|ref|YP_004291278.1| major facilitator superfamily protein [Methanobacterium sp. AL-21]
gi|325331244|gb|ADZ10306.1| major facilitator superfamily MFS_1 [Methanobacterium sp. AL-21]
Length = 559
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 23/161 (14%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P V DFM + L VK +T+ E L++ + RI G PV+D L+G+VSD D+
Sbjct: 402 PEKRTLIVKDFMVS--NLISVKLDSTILELLKLFTKYRIGGAPVLDSQKNLIGMVSDGDI 459
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEV--------QKLLSKTNGKMVGDLMTPAPVV 189
+ + P+ S EV Q +L++ V D+M +
Sbjct: 460 I------------RYLAPKEGSVHDFIYEVLVEDEENEQDVLNERINATVEDVMEKKQIY 507
Query: 190 -VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
V+E E A R+L +++LPV+D++ K++GII+RG++
Sbjct: 508 TVKEEDTFERAIRILSHHHFKKLPVLDSNNKVIGIISRGDI 548
>gi|124028010|ref|YP_001013330.1| hypothetical protein Hbut_1148 [Hyperthermus butylicus DSM 5456]
gi|123978704|gb|ABM80985.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 283
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 26/150 (17%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D+M+T + VV P + + +++ RI VID+ K VG+V+ D + L +
Sbjct: 5 FRVSDYMSTP--VVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRLVA 62
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S + P V+ V D+MT PV +R+ +L +AARL
Sbjct: 63 ERFSSK------PLVNIA------------------VADIMTRDPVTIRDNRSLREAARL 98
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++ LPVVD DGKLVGIIT+ ++VRA
Sbjct: 99 MIKHGVSGLPVVDEDGKLVGIITKSDIVRA 128
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 83/266 (31%)
Query: 48 VLATSSDRVSALRRSSAVFASG-TLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTV-- 104
V+ T ++ +RR + G + + A G+ T+ DF+ E KP +
Sbjct: 16 VVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRLVAERFSSKPLVNIAV 75
Query: 105 -----------------DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL--DSISG 145
EA ++++ ++G PV+D+D KLVG+++ D++ + + G
Sbjct: 76 ADIMTRDPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGIITKSDIVRAFAEKLRG 135
Query: 146 SGRADNSM---FPEVDSTWKTFNEVQKL-------------------------------- 170
+ + M FP+ + W + V L
Sbjct: 136 KFKVRDYMEADFPDA-TPWHSIYYVADLLYNSPVKRVLVVEGERLLGIIAPSDIAFLSEL 194
Query: 171 --LSKT------------NGKM----------VGDLMTPAPVVVRETTNLEDAARLLLET 206
L+KT G+M D+MTP+PV + +L AA+L+L
Sbjct: 195 PMLAKTRIKPIRRFAELPKGRMGPVYSYVMLTAQDVMTPSPVTIGPDEDLALAAQLMLRH 254
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+ +PVV+ D VGI+ + N+++A
Sbjct: 255 GFSSVPVVE-DETPVGIVVKHNILKA 279
>gi|407474893|ref|YP_006789293.1| hypothetical protein Curi_c24510 [Clostridium acidurici 9a]
gi|407051401|gb|AFS79446.1| CBS domain-containing protein [Clostridium acidurici 9a]
Length = 146
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 16/140 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT++E ++L E I+G PV++++ K++G+V++ DLL + N P V
Sbjct: 14 VDPDTTIEELAKVLTENNISGVPVVENE-KIIGIVTEGDLLH--------KEVNPKTPGV 64
Query: 158 DSTW------KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
S K F + + L K + ++MT +V E T +++ A +++ R+
Sbjct: 65 YSVMGGFAYLKEFEKYKLELQKLSAHKASEIMTTKLELVTEDTEIKEIASIMINKNINRV 124
Query: 212 PVVDADGKLVGIITRGNVVR 231
PVV DGKLVGI++R +V++
Sbjct: 125 PVV-RDGKLVGIVSRADVLK 143
>gi|224535972|ref|ZP_03676511.1| hypothetical protein BACCELL_00836, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522427|gb|EEF91532.1| hypothetical protein BACCELL_00836 [Bacteroides cellulosilyticus
DSM 14838]
Length = 273
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL----------RFVRDMNKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
GKLVG+IT ++ +A
Sbjct: 193 GKLVGLITYKDITKA 207
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|254431490|ref|ZP_05045193.1| CBS [Cyanobium sp. PCC 7001]
gi|197625943|gb|EDY38502.1| CBS [Cyanobium sp. PCC 7001]
Length = 145
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T + EA++++ E I G PV+D LVG +++ DL+ + SG +D+
Sbjct: 12 TPLQEAVKLMSEHHIGGMPVLDQAGSLVGELTEQDLM----VRESGFDAGPYVMLLDAVI 67
Query: 162 KTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
N +Q + + + G VG++M L AAR L E+ +RL VVD DG+
Sbjct: 68 YLRNPLQWDRQVHQVLGSTVGEVMRKGSHTCSADLPLPAAARQLHESATQRLFVVDGDGR 127
Query: 220 LVGIITRGNVVRA 232
VG++TRG+VVRA
Sbjct: 128 PVGVLTRGDVVRA 140
>gi|260771538|ref|ZP_05880462.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613503|gb|EEX38698.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP T+ +ALE+L + + T PV+DD+ +LVG+ S D L +N F
Sbjct: 233 LKPNDTIHKALELLQQNQFTALPVVDDEHELVGIFSLVDFL--------RSVENRKF--- 281
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL--LLETKYRRLPVVD 215
+F + K K V M APV +R T++ AR+ LL + Y +P+VD
Sbjct: 282 ----DSFIALYLHAKKKAKKEVSQFMNAAPVFMRTDTHI---ARMIPLLTSGYHHIPIVD 334
Query: 216 ADGKLVGIITRGNVVRAALQIK 237
+L G++T+ +++ IK
Sbjct: 335 NRNRLKGMVTQSDLIEFLYNIK 356
>gi|406998496|gb|EKE16427.1| CBS protein [uncultured bacterium]
Length = 150
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT +++ V +D+ IL+E RI G PV+DD KLVG++++ D DS +
Sbjct: 3 VKDIMT--KDVITVSSDHGIDQVANILIENRIHGLPVVDD-GKLVGIITETDFFVKDSFN 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + + K + +K +++ D+MT V V E ++E +
Sbjct: 60 FHLPSYIDFIRKTKFSGKMSSTEKKQIAELINSTAKDIMTEQCVTVCEEDDIEKLLNVFK 119
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
+T++ +PV+ G+L GI+TR +V+R
Sbjct: 120 DTRFSTVPVICEGGELKGIVTRSDVIRT 147
>gi|330806493|ref|XP_003291203.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
gi|325078625|gb|EGC32266.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
Length = 147
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSI 143
V MT+K L+ + +T+D AL+ L I PV+D+D L G+V+D DL LA
Sbjct: 5 VRQLMTSKC-LYTISMDSTLDVALKSLNANSIHRLPVVDNDGNLKGIVTDRDLRLA---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
DS + F ++ + K V +M PV + + + + DAA+L+
Sbjct: 60 -------------TDSPFIQFETNEERMEKLKQHKVSSIMKQNPVTIEDYSPVVDAAKLM 106
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ LPVVD +GKL+G++TR +++ ++I
Sbjct: 107 RVSNVGGLPVVDKNGKLIGMVTRSDLLDCLIKI 139
>gi|154249344|ref|YP_001410169.1| signal transduction protein [Fervidobacterium nodosum Rt17-B1]
gi|154153280|gb|ABS60512.1| putative signal transduction protein with CBS domains
[Fervidobacterium nodosum Rt17-B1]
Length = 309
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 34/146 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP TV + EIL KRI+G PV+DDD +VG++S D++ + ++ +V
Sbjct: 28 VKPDRTVAQVKEILRLKRISGVPVVDDDGNVVGIISIEDII-------KSLENGTLHEKV 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D MT + + + L++ + KY R PVVD D
Sbjct: 81 DKH----------------------MTARVICLHKDMTLQEVIKQFERYKYGRFPVVDDD 118
Query: 218 GKLVGIITRGNVVRAALQIKHATEMG 243
GKLVGI+T+ +++ A AT +G
Sbjct: 119 GKLVGIVTKNDILAAV-----ATRLG 139
>gi|25011667|ref|NP_736062.1| hypothetical protein gbs1627 [Streptococcus agalactiae NEM316]
gi|77414837|ref|ZP_00790953.1| AcuB family protein [Streptococcus agalactiae 515]
gi|24413207|emb|CAD47286.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159114|gb|EAO70309.1| AcuB family protein [Streptococcus agalactiae 515]
Length = 219
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +L+GLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLLGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
K LPVVD +G+L GIIT +V +A L+I
Sbjct: 103 SRKIGVLPVVD-NGQLYGIITDRDVFKAFLEI 133
>gi|384097620|ref|ZP_09998740.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
gi|383836502|gb|EID75909.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
Length = 154
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 26/153 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V D MTTK L +KP ++ E + + +E +ITG PV+D +LVG++SD D + S
Sbjct: 22 SVRDHMTTK--LVTLKPDQSLIEVINLFMENKITGAPVVDVAGRLVGIISDSDCMKQIS- 78
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
GR N + N + V D MT + + DAA
Sbjct: 79 --EGRYFN-------------------MPIANMR-VADYMTKEVQTIDPDKTIFDAAAEF 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+T +RR PV++ DG+L+G I+R +V+ AAL++
Sbjct: 117 FKTHHRRFPVIE-DGELIGQISRKDVMLAALKM 148
>gi|317153451|ref|YP_004121499.1| hypothetical protein Daes_1741 [Desulfovibrio aespoeensis Aspo-2]
gi|316943702|gb|ADU62753.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 150
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT K + P T + A +L+E +I G PVID+ +VG++ DL+A
Sbjct: 6 DIMTAK--CITLTPDTDIATAARVLLENKINGAPVIDEKGTVVGVLCQADLVA----QQK 59
Query: 147 GRADNSMFPEVDSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S F +D + + +E+++ ++K V + MT AP V+ T ++D A ++
Sbjct: 60 KITLPSFFTLLDGVFPLSSHDELEREITKIAALKVAEAMTAAPTVIAPDTGIDDIATMMA 119
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
K LPV+D +G+LVG++ + +V++ L+
Sbjct: 120 NKKLYTLPVLD-NGRLVGVVGKEDVLKTLLK 149
>gi|453049496|gb|EME97086.1| putative CBS domain-containing protein [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 228
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
S G TVGD MT + V E ++ L E R+ PV+ + ++VG+VS DLL
Sbjct: 5 SHGPRTVGDVMT--RTVVAVGRRAVYKEIVKTLAEWRVGTVPVLAGEGRVVGVVSRADLL 62
Query: 139 ALDSISGS-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ + GR V + L+K + DLM+ V VR +
Sbjct: 63 SREEFRDEPGREVEG----VGAAVALGRHGADGLAKAAARTAEDLMSAPAVTVRGDATVA 118
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+AAR++ + + LPVVDA+G+L GI++RG+++ L+
Sbjct: 119 EAARIMARARVKTLPVVDAEGRLAGIVSRGDLLTVYLR 156
>gi|440712734|ref|ZP_20893348.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SWK14]
gi|436442573|gb|ELP35695.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SWK14]
Length = 193
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
GT T + +P + + M + L + PT EAL++L+ +RI+G PV+D D
Sbjct: 26 GTATLPTPSPGTMPHVTAREMMVRN-LITLSPTMDALEALDVLLRQRISGAPVVDGDGHF 84
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VG+ S+ + + G + P VGDL P
Sbjct: 85 VGVFSEKSCMKF--VVGMAYENLPSIP-----------------------VGDLTDKNPP 119
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ E T+L A+ L+ RRLPV+D++G+L G I+R +V+RA
Sbjct: 120 TISEETDLLTIAQTFLDAACRRLPVLDSEGRLRGQISRRDVMRA 163
>gi|452949577|gb|EME55044.1| CBS domain containing membrane protein [Amycolatopsis decaplanina
DSM 44594]
Length = 231
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 17/138 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T +L R++G PV+DD+ ++VG+VS DLL E
Sbjct: 18 VKPETPFKAITVLLTSWRLSGAPVVDDEGRVVGVVSQRDLL-----------------ER 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +L K G+ +LMT + V + +++A RL+ + + RLPV+D D
Sbjct: 61 EIRHRLLRFRPRLRRKVEGRRADELMTTPAITVAQDAGVDEAIRLMEDHRVHRLPVLDDD 120
Query: 218 GKLVGIITRGNVVRAALQ 235
KLVGI+ R +++R L+
Sbjct: 121 AKLVGIVGRSDLLRGFLR 138
>gi|32473238|ref|NP_866232.1| inosine monophosphate dehydrogenase-like protein [Rhodopirellula
baltica SH 1]
gi|417303259|ref|ZP_12090318.1| protein containing Cystathionine beta-synthase, core domain
[Rhodopirellula baltica WH47]
gi|421613449|ref|ZP_16054530.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SH28]
gi|32397917|emb|CAD73918.1| conserved hypothetical protein-putative inosine monophosphate
dehydrogenase-related protein [Rhodopirellula baltica SH
1]
gi|327540439|gb|EGF27024.1| protein containing Cystathionine beta-synthase, core domain
[Rhodopirellula baltica WH47]
gi|408495744|gb|EKK00322.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SH28]
Length = 193
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
GT T + +P + + M + L + PT EAL++L+ +RI+G PV+D D
Sbjct: 26 GTATLPTPSPGTMPHVTAREMMVRN-LITLSPTMDALEALDVLLRQRISGAPVVDGDGHF 84
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VG+ S+ + + G + P VGDL P
Sbjct: 85 VGVFSEKSCMKF--VVGMAYENLPSIP-----------------------VGDLTDKNPP 119
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ E T+L A+ L+ RRLPV+D++G+L G I+R +V+RA
Sbjct: 120 TISEETDLLTIAQTFLDAACRRLPVLDSEGRLRGQISRRDVMRA 163
>gi|254380661|ref|ZP_04996027.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339572|gb|EDX20538.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 216
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V PT E + + ++T PV++ + ++VG+VS+ DLL + + P +
Sbjct: 8 VTPTAEFKEIVTAIERWKVTALPVVEGEGRVVGVVSEADLLPKEEF-------HEHRPGM 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + SK DLMT V V + L ARL+ E +RLPVVDAD
Sbjct: 61 IEHMRRLADT----SKAGSTCAEDLMTTPAVTVHPSATLPQVARLMAERHIKRLPVVDAD 116
Query: 218 GKLVGIITRGNVVRAALQ 235
G L GI++R ++++ L+
Sbjct: 117 GTLKGIVSRADLLKVFLR 134
>gi|167629788|ref|YP_001680287.1| cbs domain [Heliobacterium modesticaldum Ice1]
gi|167592528|gb|ABZ84276.1| cbs domain [Heliobacterium modesticaldum Ice1]
Length = 151
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
E++ V P T V + +++++EKRI+G PVI ++G++S+ DLL D +
Sbjct: 10 EVYTVYPDTPVADVVKLMIEKRISGVPVISRQGDVIGIISEGDLLFKDK--------DLR 61
Query: 154 FPEVDSTW--KTFNEVQKLLSKTNGKMVG----DLMTPAPVVVRETTNLEDAARLLLETK 207
+P S + E K ++ K + ++MT + V E + + A L+ E +
Sbjct: 62 YPSFISLLGGMIYLESPKRFAEEFRKSIALRAEEIMTGDVITVEEEARVSEMAGLMTEQQ 121
Query: 208 YRRLPVVDADGKLVGIITRGNVVRA 232
RLPV+ +GKLVGI+TR +++RA
Sbjct: 122 VNRLPVL-RNGKLVGIVTRADILRA 145
>gi|170741756|ref|YP_001770411.1| hypothetical protein M446_3596 [Methylobacterium sp. 4-46]
gi|168196030|gb|ACA17977.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
Length = 241
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 17/143 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T + I VEKRI+ PV+D+ LVG+VS+ DLL ++ R
Sbjct: 14 VRPETPLGALARIFVEKRISAAPVVDESGALVGIVSEGDLLHRAELATDRR--------- 64
Query: 158 DSTW-KTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
S+W + F ++ L + +G+ V D+M V T L + +L RR+P+
Sbjct: 65 RSSWLRFFASIETLAHEYREAHGRTVRDVMASPVVTATPDTPLPEIVEILERRHIRRVPI 124
Query: 214 VDA----DGKLVGIITRGNVVRA 232
V+A +LVGI+TR ++VRA
Sbjct: 125 VEARPGLPERLVGIVTRSDLVRA 147
>gi|345868322|ref|ZP_08820314.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
gi|344047243|gb|EGV42875.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
Length = 156
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 26/153 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT +L KP TVDE + L+ +I+G PV++ +LVG++S+ D L
Sbjct: 24 VSDYMT--RDLITFKPEHTVDEVIHALIANKISGGPVVNAKNELVGIISEGDCL------ 75
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
K E +VG+ M + ++ +AA+ L
Sbjct: 76 -----------------KQITESHYYNMPVEQDVVGNRMVKNVETIDGDMDVFEAAKKFL 118
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+K RR P+V+ +GKLVG I++ ++++AA+Q+K
Sbjct: 119 NSKIRRFPIVE-EGKLVGQISQKDILKAAMQLK 150
>gi|374287258|ref|YP_005034343.1| hypothetical protein BMS_0457 [Bacteriovorax marinus SJ]
gi|301165799|emb|CBW25371.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 153
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SI 143
V +FMT +++ TV+EA +I+ +K + PV+D LVG++++ D + D +I
Sbjct: 7 VSEFMT--KDVISCTEENTVEEAAKIMHDKGFSVMPVVDGAGALVGILTESDFVGTDANI 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + +F + F++ +++ K+ K +G++MT V +L D ++
Sbjct: 65 PHALASIKKLFGQ----NFYFSDAEEIYKKSKAKKLGEVMTKDVTTVTSDQSLSDVISVM 120
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+RLPVVD GKLVGIITR ++++A ++
Sbjct: 121 SHNHLKRLPVVDG-GKLVGIITRKDLLKAYTKL 152
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238
V + MT + E +E+AA+++ + + +PVVD G LVGI+T + V I H
Sbjct: 7 VSEFMTKDVISCTEENTVEEAAKIMHDKGFSVMPVVDGAGALVGILTESDFVGTDANIPH 66
Query: 239 A 239
A
Sbjct: 67 A 67
>gi|357061469|ref|ZP_09122221.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
gi|355373957|gb|EHG21260.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
Length = 493
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 33/132 (25%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
+TV AL+++ E I G PV+DD+ LVG+V++ DL R +N + +V+
Sbjct: 110 STVGGALQLMTEYHIGGIPVVDDEMHLVGIVTNRDL----------RFENDLQKKVE--- 156
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKL 220
D+MT +V + T+L AAR+L E K +LPVVD + L
Sbjct: 157 -------------------DVMTKENLVTTTQQTDLAGAARILQENKIEKLPVVDTENHL 197
Query: 221 VGIITRGNVVRA 232
VG+IT ++ +A
Sbjct: 198 VGLITYKDITKA 209
>gi|269955495|ref|YP_003325284.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304176|gb|ACZ29726.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
DSM 15894]
Length = 501
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 31/142 (21%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T++E + E RI+GFPV+D +L+G+V++ DL F V + W
Sbjct: 109 TLEELDRLAGEYRISGFPVVDAGGRLIGIVTNRDL---------------RFTPV-AEWA 152
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT-NLEDAARLLLETKYRRLPVVDADGKLV 221
T V D+MTPAP++ +T + E+A LL + K RLP+VDADG+L
Sbjct: 153 T-------------TTVADVMTPAPLITGPSTISREEATLLLRKHKLERLPLVDADGRLA 199
Query: 222 GIITRGNVVRAALQIKHATEMG 243
G+IT + V++ Q +A++ G
Sbjct: 200 GLITVKDFVKSE-QFPNASKDG 220
>gi|88808652|ref|ZP_01124162.1| CBS domain protein [Synechococcus sp. WH 7805]
gi|88787640|gb|EAR18797.1| CBS domain protein [Synechococcus sp. WH 7805]
Length = 156
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ M+ + V P T + +A+ +L + I+G PV+ DD LVG +++ +L+ +S
Sbjct: 6 TVGEVMSAP--VLTVTPATPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLMVRESG 63
Query: 144 SGSGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G V DLM+ ++ L A
Sbjct: 64 VDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GNTVADLMSRDSHCCAQSLPLPKA 117
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A +L E +RL VVD + + VG++TRG+VVRA
Sbjct: 118 ASMLHEKGTQRLIVVDEERRPVGMLTRGDVVRA 150
>gi|365885833|ref|ZP_09424817.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285444|emb|CCD97348.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 242
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTPIVDAANIMLQRHVSGLPVVDATGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV +
Sbjct: 73 LGPGKSAAD----FVHEHGRKVAEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVKGE 128
Query: 218 GKLVGIITRGNVVRA 232
++VGI++R N+++A
Sbjct: 129 -QVVGIVSRANLLQA 142
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V T + DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTPIVDAANIMLQRHVSGLPVVDATGKLVGVVSEGDFIR 55
>gi|384246764|gb|EIE20253.1| CBS-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 212
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 44/169 (26%)
Query: 66 FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVI--D 123
F +L +SA+P + ++ D M+T +L V P T +++ +I ++TG PV+ +
Sbjct: 76 FFQNSLFKDSASPGN---SLKDIMST--DLTYVYPETKIEDLGQIF--SKVTGVPVVKSE 128
Query: 124 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 183
D LVG++S DL SKT GK+V D+
Sbjct: 129 SDLTLVGVLSKKDL----------------------------------SKT-GKVVSDIW 153
Query: 184 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ PV R + DAA L+L+ K R+P+VD KL+GI+TR ++ A
Sbjct: 154 SSPPVAARGENKVADAACLMLKHKVHRIPIVDTQAKLIGIVTRTDIFTA 202
>gi|403253876|ref|ZP_10920176.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|402810779|gb|EJX25268.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 215
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ ++ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
E LPVVD G LVGIIT+ ++ + ++I
Sbjct: 103 EKDISGLPVVDDAGHLVGIITQTDIFKVFVEI 134
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MT P+ + T+ +A +L+ + K +RL +V + K+VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKNEKIVGIVTEKDLLYAS 56
>gi|222100721|ref|YP_002535289.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221573111|gb|ACM23923.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 150
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGIPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
N++ + + K K + + M+ PVVV+E L AA L+ ++ LPVVD +LV
Sbjct: 75 ---NQLIRNIVKIKDKPISNYMSKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDDSMQLV 131
Query: 222 GIITRGNVVRAA 233
GI+ R +V+R
Sbjct: 132 GIVRRIDVLRVV 143
>gi|421451733|ref|ZP_15901094.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
gi|400182164|gb|EJO16426.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
Length = 219
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGLV++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLVTEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVTDTPRVLEKIANLIASEN 165
>gi|345011229|ref|YP_004813583.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344037578|gb|AEM83303.1| CBS domain containing membrane protein [Streptomyces violaceusniger
Tu 4113]
Length = 221
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E + L + R++ PV++ + +++G+VS+ DLL + S A + P++
Sbjct: 27 EIVRTLEQWRVSALPVLEGEGRVIGVVSEADLLPKEEFRDSDPARVAQLPDLPG------ 80
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
++K +LMT + V + L +AAR++ + +RLPVVD +G+L GI++
Sbjct: 81 -----IAKAGAVTADELMTSPAITVHASATLAEAARIMTHKRVKRLPVVDEEGRLEGIVS 135
Query: 226 RGNVVRAALQ 235
R ++++ L+
Sbjct: 136 RADLLKVFLR 145
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
+G T + MT+ V + T+ EA I+ KR+ PV+D++ +L G+VS DLL
Sbjct: 83 KAGAVTADELMTSP--AITVHASATLAEAARIMTHKRVKRLPVVDEEGRLEGIVSRADLL 140
Query: 139 AL-----DSISGSGRAD--NSMFPEVDSTWK-TFNE 166
+ D I R + +FP T + + NE
Sbjct: 141 KVFLRPDDDIEEEVRREVVAHLFPAAGETVRVSVNE 176
>gi|52632001|gb|AAU85401.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 187
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 110 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST---WKTFNE 166
+L E +I G PV+++ ++VG++S+ D+L L + S+F D + ++
Sbjct: 61 VLKENKIAGVPVLNEREEVVGVISEADVLKL---LENFHWYTSIFTAHDLMNIFGEDLHD 117
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
VQ+ + K + V D+M+ P V T ++DAA+++ T + RLPVVD + KLVGI+ R
Sbjct: 118 VQQDIEKASKMKVKDVMSKKPETVPPDTLIDDAAQIMHSTGFNRLPVVDENDKLVGIVAR 177
Query: 227 GNVV 230
+++
Sbjct: 178 ADII 181
>gi|418017201|ref|ZP_12656760.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
gi|345527894|gb|EGX31202.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
Length = 219
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGLV++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLVTEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|212225036|ref|YP_002308272.1| inosine 5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
gi|212009993|gb|ACJ17375.1| inosine-5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
Length = 486
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 34/133 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ ++P T+D AL ++ + I G PV+ +D +++G+++ D+ A
Sbjct: 101 EDVITIEPDETLDYALFLMEKNDIDGLPVVGEDGRIIGIITKKDIAA------------- 147
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G++V ++MT + V E +EDA L++E + RLP
Sbjct: 148 ---------------------KEGRLVREVMTRDVITVPEDIAVEDALTLMVENRIARLP 186
Query: 213 VVDADGKLVGIIT 225
VVD DGKLVGIIT
Sbjct: 187 VVDGDGKLVGIIT 199
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
V++AL ++VE RI PV+D D KLVG+++ DL+ + R +N
Sbjct: 170 VEDALTLMVENRIARLPVVDGDGKLVGIITVSDLMMRKKYRNAVRDENG 218
>gi|403718964|ref|ZP_10943565.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
gi|403208215|dbj|GAB98248.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
Length = 199
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 17/137 (12%)
Query: 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155
+ V+P + +D+AL+++ E+++T PV+D+ LVG++S+ DLL ++ RA + P
Sbjct: 12 YSVRPDSEIDDALQLMAERKVTALPVVDEGEVLVGVLSEIDLLRR-AVEPDRRA--HVLP 68
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
VQ+ S + VG++MT AP E +++ D L + ++ LPVV
Sbjct: 69 -----------VQE--SAPLPRTVGEIMTSAPRSTTEGSDVADLITLFTTSSFKSLPVVR 115
Query: 216 ADGKLVGIITRGNVVRA 232
+ +LVG+I+R +V+RA
Sbjct: 116 GN-QLVGVISRSDVIRA 131
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+V ++MT VR + ++DA +L+ E K LPVVD LVG+++ +++R A++
Sbjct: 2 LVREIMTSPAYSVRPDSEIDDALQLMAERKVTALPVVDEGEVLVGVLSEIDLLRRAVE 59
>gi|448536098|ref|ZP_21622343.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
gi|445702541|gb|ELZ54485.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
Length = 400
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT +E+LH V +V E + + ++R TG+PV+D D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAELMSRMFKERHTGYPVLDGD-ELVGMVTLEDA------ 307
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 308 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 344
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVDADG+LVG+I+R +++ A
Sbjct: 345 QEHGVGRLPVVDADGELVGLISRSDLMTA 373
>gi|307719578|ref|YP_003875110.1| hypothetical protein STHERM_c19020 [Spirochaeta thermophila DSM
6192]
gi|386347674|ref|YP_006045923.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|306533303|gb|ADN02837.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
gi|339412641|gb|AEJ62206.1| CBS domain containing membrane protein [Spirochaeta thermophila DSM
6578]
Length = 214
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT+ +A E++ ++I PVID+ ++VG+VS+ DLL P
Sbjct: 14 VTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLLYAS-------------PSP 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+T + E+ +LLSK K V + TP + V E T +EDAAR++++ LPVV +
Sbjct: 61 ATTLNVY-EMAQLLSKVRIKEV--MRTPV-ITVTEDTYIEDAARIMVDNNIGGLPVVRGE 116
Query: 218 GKLVGIITRGNVVRAALQI 236
KLVGIIT ++ + +++
Sbjct: 117 -KLVGIITESDIFKRFVEL 134
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V +MT PV V T L DA L+ K RLPV+D G++VGI++ +++ A+
Sbjct: 3 VAQVMTHNPVTVTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLLYAS 57
>gi|410464699|ref|ZP_11318104.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982185|gb|EKO38669.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 413
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + E +E+L+ + + PV+D K+VG+V+ DLL +S A S+F
Sbjct: 123 VGPDTDLAEVVELLLSRHVKAVPVVDGGRKVVGVVTGGDLLTRGGLS----ARLSLF--- 175
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++ + +G V ++MT + E T+L +A+ +++ +RLPVVD
Sbjct: 176 --GLLPADAREEAAAALSGHTVTEVMTSPAETIGERTSLREASERMVKRGLKRLPVVDEA 233
Query: 218 GKLVGIITRGNVVRAALQI 236
G+L+GI++R +++RAA ++
Sbjct: 234 GELIGIVSRTDILRAAAKV 252
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 14/155 (9%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP-----VIDDDWKLVGLVSDYDL 137
+T G ++ L PT DE+L + V R+ P V+D K+ G+V D DL
Sbjct: 263 FTAGLMQQARDVLITDVPTARPDESL-LDVAARLVASPLRRVVVLDAAGKVAGIVHDGDL 321
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
LA R + P + + + G+ M V E L
Sbjct: 322 LA--------RCGPAKRPGILRALFGKKDDDEAAGVCPVGTAGEAMQSKVYSVAEDAALT 373
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
D + ++ +RL V D DGKL G++ R V+RA
Sbjct: 374 DVLQKMIVHGVKRLVVTDDDGKLRGMVDREAVLRA 408
>gi|303245552|ref|ZP_07331835.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
gi|302492815|gb|EFL52680.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
Length = 220
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
KP T++ +A +++ E PV+DD+ +LVG+VSD D+ A S +D
Sbjct: 15 KPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDI---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ LLS+ +GD+MT V V +E AA LLL LPVVD D
Sbjct: 66 -----MHELYYLLSEIK---IGDIMTKTVVAVTPDDTVEKAAVLLLRHNVGGLPVVDDDN 117
Query: 219 KLVGIITRGNVVRAALQIKHATEMGAQ 245
K+VG+IT ++ + + I G Q
Sbjct: 118 KVVGVITDSDIFKVLVSITGVLNGGLQ 144
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ D M+ +PV + T++ AA+++ E Y RLPVVD +G+LVGI++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDIKEAS 57
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
+GD MT + + V P TV++A +L+ + G PV+DDD K+VG+++D D+ L SI
Sbjct: 78 IGDIMT--KTVVAVTPDDTVEKAAVLLLRHNVGGLPVVDDDNKVVGVITDSDIFKVLVSI 135
Query: 144 SG 145
+G
Sbjct: 136 TG 137
>gi|422848126|ref|ZP_16894802.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|422851118|ref|ZP_16897788.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|422878252|ref|ZP_16924718.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|422928107|ref|ZP_16961049.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|422931103|ref|ZP_16964034.1| CBS domain protein [Streptococcus sanguinis SK340]
gi|325690658|gb|EGD32659.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|325694987|gb|EGD36891.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|332367226|gb|EGJ44961.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|339617252|gb|EGQ21878.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|339620285|gb|EGQ24855.1| CBS domain protein [Streptococcus sanguinis SK340]
Length = 218
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|153872441|ref|ZP_02001333.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
gi|152071093|gb|EDN68667.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
Length = 155
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 88 FMTTKE----ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
MT KE EL+ +KP TV EA ++++ ++I PVID+ +L+GL+S D+LA SI
Sbjct: 1 MMTVKELMSRELYTLKPDDTVHEARQLMLSQQIRHIPVIDEQEQLIGLLSQRDVLAA-SI 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S + E++S G + +MT V+ E T+L +A + +
Sbjct: 60 STLADLETQEREELES----------------GIPINKIMTTNVVIAEEDTSLLNATQFM 103
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAA 233
L K LPV+ +L+GI+T + V+ A
Sbjct: 104 LSQKQGCLPVLRG-KQLIGILTETDFVKLA 132
>gi|323351071|ref|ZP_08086728.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|401681231|ref|ZP_10813136.1| CBS domain protein [Streptococcus sp. AS14]
gi|422820741|ref|ZP_16868934.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|422823062|ref|ZP_16871250.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|422826857|ref|ZP_16875036.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|422847223|ref|ZP_16893906.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|422854801|ref|ZP_16901465.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|322122795|gb|EFX94504.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|324991359|gb|EGC23292.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|324993712|gb|EGC25631.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|324994975|gb|EGC26888.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|325687061|gb|EGD29084.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|325696296|gb|EGD38187.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|400187366|gb|EJO21561.1| CBS domain protein [Streptococcus sp. AS14]
Length = 218
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|148378202|ref|YP_001252743.1| hypothetical protein CBO0199 [Clostridium botulinum A str. ATCC
3502]
gi|153930979|ref|YP_001382603.1| hypothetical protein CLB_0240 [Clostridium botulinum A str. ATCC
19397]
gi|153936233|ref|YP_001386155.1| hypothetical protein CLC_0255 [Clostridium botulinum A str. Hall]
gi|153940514|ref|YP_001389562.1| hypothetical protein CLI_0264 [Clostridium botulinum F str.
Langeland]
gi|168177532|ref|ZP_02612196.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|170756627|ref|YP_001779830.1| hypothetical protein CLD_0576 [Clostridium botulinum B1 str. Okra]
gi|226947420|ref|YP_002802511.1| CBS domain-containing protein [Clostridium botulinum A2 str. Kyoto]
gi|384460642|ref|YP_005673237.1| hypothetical protein CBF_0232 [Clostridium botulinum F str. 230613]
gi|421838951|ref|ZP_16272654.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|429243973|ref|ZP_19207455.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
gi|148287686|emb|CAL81751.1| conserved hypothetical membrane [Clostridium botulinum A str. ATCC
3502]
gi|152927023|gb|ABS32523.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152932147|gb|ABS37646.1| CBS domain protein [Clostridium botulinum A str. Hall]
gi|152936410|gb|ABS41908.1| CBS domain protein [Clostridium botulinum F str. Langeland]
gi|169121839|gb|ACA45675.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
gi|182670387|gb|EDT82361.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|226844378|gb|ACO87044.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
gi|295317659|gb|ADF98036.1| CBS domain protein [Clostridium botulinum F str. 230613]
gi|409736556|gb|EKN37942.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|428758893|gb|EKX81284.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
Length = 138
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 34/157 (21%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + V +V++A +++ E + P+ D++ K+VG+++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVA 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+DN++ VGD+MT PVV + ++ DAAR++
Sbjct: 59 KG--SDNNIK------------------------VGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
E + RRLPV D + +VGI++ G++ A++ KH E
Sbjct: 93 ERQIRRLPVED-NQNIVGIVSLGDI---AIEPKHENE 125
>gi|170287905|ref|YP_001738143.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|403252570|ref|ZP_10918879.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|170175408|gb|ACB08460.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
gi|402812060|gb|EJX26540.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 150
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
N++ + + K + V D M PVVV+E L AA L+ ++ LPVVD +LV
Sbjct: 75 ---NQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLV 131
Query: 222 GIITRGNVVRAA 233
GI+ R +++R
Sbjct: 132 GIVRRIDILRVV 143
>gi|387783442|ref|YP_006069525.1| putative CBS domain-containing protein [Streptococcus salivarius
JIM8777]
gi|338744324|emb|CCB94690.1| putative CBS domain protein [Streptococcus salivarius JIM8777]
Length = 219
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|237653620|ref|YP_002889934.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624867|gb|ACR01557.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 217
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
+ T+E LHV P + + EI+ K++ PVID D K++G++S D+ R
Sbjct: 6 IMTREVLHV-GPEASFSQVSEIMRLKKVRHVPVIDQDRKVLGIISHRDV---------QR 55
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
A SM +D EV+ LLSK D+M + V T +E+AAR++ K
Sbjct: 56 AQPSMITTLD-----VGEVKYLLSKITA---ADIMHKSVVSCSPRTQIEEAARMMRPKKL 107
Query: 209 RRLPVVDADGKLVGIIT 225
L VVD G+LVGI+T
Sbjct: 108 GCLVVVDDAGRLVGIVT 124
>gi|347523979|ref|YP_004781549.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460861|gb|AEM39297.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 294
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 29/139 (20%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
++L +KP ++ EA +IL EK I G PVIDD+ +L+G+++ D+ GR D
Sbjct: 178 KQLITLKPNMSIREAAKILSEKMIRGAPVIDDEGRLIGIITLADIA---KAVAEGRLDAK 234
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
V + M+ V VRE ++ DA RL+ + + RL
Sbjct: 235 --------------------------VEEYMSKEVVTVREDQDILDAIRLMQKYRIGRLV 268
Query: 213 VVDADGKLVGIITRGNVVR 231
V+DA GKL GI+TR +++R
Sbjct: 269 VLDAMGKLKGIVTRTDILR 287
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
VG + + + ++ ++ +AA++L E R PV+D +G+L+GIIT ++ +A
Sbjct: 172 VGSIASKQLITLKPNMSIREAAKILSEKMIRGAPVIDDEGRLIGIITLADIAKA 225
>gi|347733998|ref|ZP_08867051.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347517235|gb|EGY24427.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 223
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A +IL E RI PV+D + +L+G+VSD D+ A S +
Sbjct: 14 VTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDI---------KEASPSKATTL 64
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D +E+ LLS+ V D+MT P VR +E A ++E + LPV+D
Sbjct: 65 D-----MHELYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMIEKRIGGLPVIDDG 116
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
GKLVGII+ +V + + I G Q
Sbjct: 117 GKLVGIISDSDVFKVLITITGVRHGGVQ 144
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ + MT + V T++ A+++L E + RRLPVVDA+G+L+GI++ ++ A+
Sbjct: 2 LIREWMTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEAS 57
>gi|343083062|ref|YP_004772357.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342351596|gb|AEL24126.1| CBS domain containing protein [Cyclobacterium marinum DSM 745]
Length = 152
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMTT L T+D + +L KRI+G PV+DD+ +LVG++S+ D L + I
Sbjct: 22 VKDFMTT--NLITFSAEDTIDHVITVLTRKRISGAPVVDDNGRLVGMISEGDCLK-EIIK 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G + K + M ++ T P + ++ DAA L
Sbjct: 79 GQ-----------------YTNTPKFPASVAEHMTTEVFTLPPEI-----SIFDAADRFL 116
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
K RR PVV D KL+G I+ ++VRA ++K +T
Sbjct: 117 TLKIRRFPVV-KDQKLIGQISVSDIVRAMPKLKAST 151
>gi|148269243|ref|YP_001243703.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281411541|ref|YP_003345620.1| hypothetical protein Tnap_0098 [Thermotoga naphthophila RKU-10]
gi|147734787|gb|ABQ46127.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281372644|gb|ADA66206.1| CBS domain containing membrane protein [Thermotoga naphthophila
RKU-10]
Length = 150
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
N++ + + K + V D M PVVV+E L AA L+ ++ LPVVD +LV
Sbjct: 75 ---NQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLV 131
Query: 222 GIITRGNVVRAA 233
GI+ R +++R
Sbjct: 132 GIVRRIDILRVV 143
>gi|312862989|ref|ZP_07723228.1| CBS domain protein [Streptococcus vestibularis F0396]
gi|311101484|gb|EFQ59688.1| CBS domain protein [Streptococcus vestibularis F0396]
Length = 219
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +I+
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLITE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|228476578|ref|ZP_04061260.1| AcuB family protein [Streptococcus salivarius SK126]
gi|228251773|gb|EEK10838.1| AcuB family protein [Streptococcus salivarius SK126]
Length = 219
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|126701088|ref|YP_001089985.1| hypothetical protein CD630_34650 [Clostridium difficile 630]
gi|254977089|ref|ZP_05273561.1| hypothetical protein CdifQC_17333 [Clostridium difficile QCD-66c26]
gi|255094417|ref|ZP_05323895.1| hypothetical protein CdifC_17436 [Clostridium difficile CIP 107932]
gi|255102674|ref|ZP_05331651.1| hypothetical protein CdifQCD-6_17826 [Clostridium difficile
QCD-63q42]
gi|255308495|ref|ZP_05352666.1| hypothetical protein CdifA_18036 [Clostridium difficile ATCC 43255]
gi|255316169|ref|ZP_05357752.1| hypothetical protein CdifQCD-7_17524 [Clostridium difficile
QCD-76w55]
gi|255518830|ref|ZP_05386506.1| hypothetical protein CdifQCD-_17063 [Clostridium difficile
QCD-97b34]
gi|255652009|ref|ZP_05398911.1| hypothetical protein CdifQCD_17625 [Clostridium difficile
QCD-37x79]
gi|255657419|ref|ZP_05402828.1| hypothetical protein CdifQCD-2_17366 [Clostridium difficile
QCD-23m63]
gi|260684984|ref|YP_003216269.1| hypothetical protein CD196_3255 [Clostridium difficile CD196]
gi|260688642|ref|YP_003219776.1| hypothetical protein CDR20291_3301 [Clostridium difficile R20291]
gi|296449015|ref|ZP_06890805.1| CBS domain protein [Clostridium difficile NAP08]
gi|296879838|ref|ZP_06903811.1| CBS domain protein [Clostridium difficile NAP07]
gi|306521751|ref|ZP_07408098.1| hypothetical protein CdifQ_19995 [Clostridium difficile QCD-32g58]
gi|384362658|ref|YP_006200510.1| hypothetical protein CDBI1_16945 [Clostridium difficile BI1]
gi|423080793|ref|ZP_17069410.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|423087194|ref|ZP_17075583.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|423090563|ref|ZP_17078852.1| CBS domain protein [Clostridium difficile 70-100-2010]
gi|115252525|emb|CAJ70368.1| conserved hypothetical protein [Clostridium difficile 630]
gi|260211147|emb|CBA66586.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214659|emb|CBE07281.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|296262108|gb|EFH08913.1| CBS domain protein [Clostridium difficile NAP08]
gi|296429127|gb|EFH15001.1| CBS domain protein [Clostridium difficile NAP07]
gi|357545132|gb|EHJ27112.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|357552282|gb|EHJ34056.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|357556267|gb|EHJ37882.1| CBS domain protein [Clostridium difficile 70-100-2010]
Length = 153
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T + MTT ++ V K ++ + +L+ ++I G PV+D + ++VG++S+ D+L +
Sbjct: 5 TAKEIMTT--DVIVAKQDDSIADVANMLIAEKIGGLPVVDSENRVVGIISETDILKKEKY 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ N + + +V+K + + VG+LM+ + V E +D A ++
Sbjct: 63 IEAPLYINLLQGLI--FLDDLKKVEKDIKQVAAYKVGELMSKDIIKVHEDDKFDDVANVM 120
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
++ R+PVVD D KL GII R ++++A
Sbjct: 121 IKKSINRVPVVDDDNKLKGIICRYDIIKA 149
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
K ++MT +V ++ ++ D A +L+ K LPVVD++ ++VGII+ ++++
Sbjct: 4 KTAKEIMTTDVIVAKQDDSIADVANMLIAEKIGGLPVVDSENRVVGIISETDILK 58
>gi|157363922|ref|YP_001470689.1| signal transduction protein [Thermotoga lettingae TMO]
gi|157314526|gb|ABV33625.1| putative signal transduction protein with CBS domains [Thermotoga
lettingae TMO]
Length = 148
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ V +V+ L I+ + ++G PV+ +D +++G +S+ D++ S
Sbjct: 3 VFDVMT--RDVTAVTKDESVENVLRIMSSQLLSGIPVVSEDMRVIGFISESDIIRATVPS 60
Query: 145 GSGRADNSMF-PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ F P+++ + V+ K V + M+ P+VV E NL A ++
Sbjct: 61 YFSLLQSASFIPDMNQFLRNAKLVKD-------KPVFEYMSSPPIVVNEHANLIHVADIM 113
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + +PVVD G+LVG+I R N+++AA++
Sbjct: 114 IRHNIKVIPVVDDLGRLVGMIGRTNILKAAME 145
>gi|398787517|ref|ZP_10549911.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
gi|396992876|gb|EJJ03965.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
Length = 202
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 29/145 (20%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV+ TT E +L E IT PV+D+D ++VG+VS+ DLL
Sbjct: 11 VVQRGTTFKEIARLLDEYEITAVPVVDEDEQVVGVVSEADLL------------------ 52
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++ ++K +MT VV R ++ +AA+L+ + K +RLPV+D
Sbjct: 53 -----------RRQIAKLGSTTAEAIMTSPAVVARPGWSVVEAAKLMEQKKVKRLPVIDD 101
Query: 217 DGKLVGIITRGNVVRAALQIKHATE 241
G+L+G+I+R ++VR L+ A +
Sbjct: 102 AGRLIGVISRSDLVRLFLRRDRAIQ 126
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+ DLMTP VVV+ T ++ ARLL E + +PVVD D ++VG+++ +++R
Sbjct: 1 MADLMTPHAVVVQRGTTFKEIARLLDEYEITAVPVVDEDEQVVGVVSEADLLR 53
>gi|422857902|ref|ZP_16904552.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|422859605|ref|ZP_16906249.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|422870375|ref|ZP_16916868.1| CBS domain protein [Streptococcus sanguinis SK1087]
gi|327462076|gb|EGF08405.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|327470488|gb|EGF15944.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|328946590|gb|EGG40728.1| CBS domain protein [Streptococcus sanguinis SK1087]
Length = 218
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|387816426|ref|YP_005676770.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
gi|322804467|emb|CBZ02017.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
Length = 138
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 34/155 (21%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT + + V +V++A +++ E + P+ D++ K+VG+++D D+ AL S++
Sbjct: 5 DVMT--QNVATVNRNDSVEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVAKG 60
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
+DN++ VGD+MT PVV + ++ DAAR++ E
Sbjct: 61 --SDNNI------------------------KVGDIMTSNPVVANKDMDIHDAARIMSER 94
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+ RRLPV D + +VGI++ G++ A++ KH E
Sbjct: 95 QIRRLPVED-NQNIVGIVSLGDI---AIEPKHENE 125
>gi|302549200|ref|ZP_07301542.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302466818|gb|EFL29911.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 234
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T E +L E RI+G PV+DDD K++G++S+ DL+A + + +F T
Sbjct: 12 TPFKEVARLLAEHRISGLPVVDDDEKVLGVISETDLMARQAEAPGPSGPRRLFRRPRWTP 71
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
+ + ++T G+ LM+ + V + +AAR++ + RLPVVD + +LV
Sbjct: 72 GSRARQARAHARTAGQ----LMSRPAITVHGDASAVEAARVMAHHRVERLPVVDDEERLV 127
Query: 222 GIITRGNVVRAALQ 235
GI+TR ++++ L+
Sbjct: 128 GIVTRRDLLQVFLR 141
>gi|383771913|ref|YP_005450978.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
gi|381360036|dbj|BAL76866.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
Length = 252
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P ++V +A+++++ +G PV D KLVG+V + D L I + +
Sbjct: 14 ISPESSVADAIQLMLSHHFSGLPVTDAGGKLVGIVCESDFLRRTEI-----GTEHVRRRL 68
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S + + + K +G+ V +MTP PV V E T L++ A L+ + +PV+ +
Sbjct: 69 LSLLLGADRIAREFVKEHGQKVEQVMTPDPVTVAEDTPLDEIAALMECRRVNHIPVMH-E 127
Query: 218 GKLVGIITRGNVVRA 232
G++VG+ITR + V A
Sbjct: 128 GRIVGMITRSDFVSA 142
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+M+ V + +++ DA +L+L + LPV DA GKLVGI+ + +R
Sbjct: 6 IMSQPVVTISPESSVADAIQLMLSHHFSGLPVTDAGGKLVGIVCESDFLR 55
>gi|218887932|ref|YP_002437253.1| hypothetical protein DvMF_2848 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758886|gb|ACL09785.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 223
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ ++MT +++ V P T++ +A +IL E RI PV+D + +L+G+VSD D+
Sbjct: 3 IREWMT--KDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D +E+ LLS+ V D+MT P VR +E A ++
Sbjct: 54 --KEASPSKATTLD-----MHELYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMI 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
E + LPV+D GKLVGII+ +V + + I G Q
Sbjct: 104 EKRIGGLPVIDDAGKLVGIISDSDVFKVLITITGVRHGGVQ 144
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ + MT + V T++ A+++L E + RRLPVVDA+G+L+GI++ ++ A+
Sbjct: 2 LIREWMTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEAS 57
>gi|340398179|ref|YP_004727204.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|387761955|ref|YP_006068932.1| AcuB family protein [Streptococcus salivarius 57.I]
gi|338742172|emb|CCB92677.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|339292722|gb|AEJ54069.1| AcuB family protein [Streptococcus salivarius 57.I]
Length = 219
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|322517389|ref|ZP_08070263.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
gi|322123987|gb|EFX95543.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
Length = 219
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 103 QNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|392410314|ref|YP_006446921.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390623450|gb|AFM24657.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 245
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 18/145 (12%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
T T+ A+ + EK I+ PV++ KLVG+V+D DL +S S D+T
Sbjct: 17 TDTLQHAINLSSEKNISIMPVLES-GKLVGIVTDRDL---KRVSPS-----------DAT 61
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
E++ LS+ VG +MTP P++V +E+ A +LL K +PVVD G +
Sbjct: 62 RLNVEEIKYRLSRVE---VGTIMTPHPIIVPPDYTIEETAEILLTNKISGVPVVDDKGTI 118
Query: 221 VGIITRGNVVRAALQIKHATEMGAQ 245
+G+IT+ ++ +A + + + G Q
Sbjct: 119 LGVITKNDLFKAMMSLTGLLKRGLQ 143
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
+V P T++E EIL+ +I+G PV+DD ++G+++ DL A+ S++G
Sbjct: 87 IVPPDYTIEETAEILLTNKISGVPVVDDKGTILGVITKNDLFKAMMSLTG 136
>gi|365893444|ref|ZP_09431621.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425843|emb|CCE04163.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 242
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA I++ + ++G PV+D KLVG+VS+ D + I G+ R +
Sbjct: 14 VTPETPIVEAANIMLTRHVSGLPVVDSAGKLVGVVSEGDFIRRSEI-GTERKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + + +G+ V ++MT AP+ + E T L + ++ +RLPV D
Sbjct: 73 LGPGKSAAD----FVQEHGRKVSEVMTKAPLTITEDTALAEIVDIMERNHVKRLPVTRGD 128
Query: 218 GKLVGIITRGNVVRA 232
++VGI++R N+++A
Sbjct: 129 -QVVGIVSRANLLQA 142
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V T + +AA ++L LPVVD+ GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPETPIVEAANIMLTRHVSGLPVVDSAGKLVGVVSEGDFIR 55
>gi|409399632|ref|ZP_11249902.1| hypothetical protein MXAZACID_02830 [Acidocella sp. MX-AZ02]
gi|409131251|gb|EKN00963.1| hypothetical protein MXAZACID_02830 [Acidocella sp. MX-AZ02]
Length = 235
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T+V +A I++ ++G PV+D+ LVG+V++ DLL I G + +
Sbjct: 14 VQPRTSVADAARIMLANHVSGLPVLDEAGVLVGVVTEGDLLRRAEIGTEGSPAGWLKALL 73
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ V T+ + V +MT +P+ +L + A+++L +RLPV++ D
Sbjct: 74 QPASVAADYV-----ATHSRHVSGVMTHSPIFATPEMSLGEVAQIMLRKHIKRLPVLE-D 127
Query: 218 GKLVGIITRGNVVRA 232
GKL G+++R ++++A
Sbjct: 128 GKLTGVVSRADLLKA 142
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V ++MT + V+ T++ DAAR++L LPV+D G LVG++T G+++R A
Sbjct: 3 VSEVMTRNALSVQPRTSVADAARIMLANHVSGLPVLDEAGVLVGVVTEGDLLRRA 57
>gi|389851878|ref|YP_006354112.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
gi|388249184|gb|AFK22037.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
Length = 485
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 35/138 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TV+ AL ++ + I G PV++D K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVEFALFLMEKHDIDGLPVVED-GKVVGIISKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V DLMT + V E ++E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKDLMTKEVITVPECVDVEEALKIMIENRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVV 230
VV+ +GKLVG+IT ++V
Sbjct: 186 VVNKEGKLVGLITMSDLV 203
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT +E+ V V+EAL+I++E RI PV++ + KLVGL++ DL+A
Sbjct: 152 VKDLMT--KEVITVPECVDVEEALKIMIENRIDRLPVVNKEGKLVGLITMSDLVARKKYK 209
Query: 145 GSGRADNS 152
+ R +N
Sbjct: 210 NAVRDENG 217
>gi|315655909|ref|ZP_07908807.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
gi|315489973|gb|EFU79600.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
Length = 212
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A+E++ IT PV+ D KL G+VS DL N P D+T
Sbjct: 19 TVPDAIELMQAHGITKLPVLHDG-KLCGVVSQLDL-------------NRALPS-DATSL 63
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
+F EV LLSK + +M P + LE+AA L+ +TK LPV+D +GK+VG
Sbjct: 64 SFGEVAYLLSKLK---IYKIMQKNPPTIAPDAMLEEAAILMRDTKVEILPVLD-EGKVVG 119
Query: 223 IITRGNVVRAALQIKHATEMGAQ 245
+IT +V+ A + I A E G +
Sbjct: 120 VITESDVLDAFIDINGAREPGTR 142
>gi|385675834|ref|ZP_10049762.1| CBS domain containing membrane protein [Amycolatopsis sp. ATCC
39116]
Length = 221
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD MT + V P + +L + +I PV+D + VG+VS+ DLLA + +
Sbjct: 6 VGDLMT--HPVVSVVPAMPFKNLVRLLDQYQIGAVPVVDGHDRRVGVVSESDLLAKEDLR 63
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G+ R ++ P W+ + + + + ++T MT V+ + + AAR L
Sbjct: 64 GADRPPSAFAP--GRRWRWWGKSRAMTAETA-------MTRRVRVIGQDEPVAVAARRLA 114
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
RRL VVD DGKLVG++ R +V+R L+
Sbjct: 115 REHLRRLYVVDGDGKLVGVLARRDVLRLFLR 145
>gi|284043348|ref|YP_003393688.1| hypothetical protein Cwoe_1887 [Conexibacter woesei DSM 14684]
gi|283947569|gb|ADB50313.1| CBS domain containing membrane protein [Conexibacter woesei DSM
14684]
Length = 153
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 19/157 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M + + V P +V+ L++L + G PV++ + VG+V++ DL+ +D
Sbjct: 3 TVADIM--ERDPITVSPEDSVETLLKVLRTHELPGVPVVNGGGRPVGIVTEADLVMVDE- 59
Query: 144 SGSGRADNSMFPEVD--------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
D + +D K F E K VGD+MT P+ V T+
Sbjct: 60 ----EEDLRLPLHIDLFGAQIFLGPVKRFEE---RFRKAIAATVGDMMTEDPITVDADTD 112
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++AAR++ E ++ RLPVV+ G+LVG++TR +V+ A
Sbjct: 113 VKEAARIIAERRHNRLPVVEH-GRLVGVVTRLDVLEA 148
>gi|452853189|ref|YP_007494873.1| CBS domain containing protein [Desulfovibrio piezophilus]
gi|451896843|emb|CCH49722.1| CBS domain containing protein [Desulfovibrio piezophilus]
Length = 222
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
++V +A EIL EK I FPVID+ +LVG+VSD D+ A S F D+
Sbjct: 17 NSSVMDAAEILREKNIRQFPVIDNKARLVGIVSDRDIR---------DAMPSKFLPGDAV 67
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
+ + L + GD+MT P+ V T +++ A +L++ K LPVVD G+L
Sbjct: 68 CERGGGLYTLTA-------GDIMTLDPITVPSDTAVDEVANILVQHKVGGLPVVDG-GEL 119
Query: 221 VGIITRGNVVR 231
+GIIT+ +V+R
Sbjct: 120 MGIITQADVLR 130
>gi|392392580|ref|YP_006429182.1| signal transduction protein [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523658|gb|AFL99388.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfitobacterium dehalogenans ATCC 51507]
Length = 149
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + + P T + E ++L + I+G PV+D L+G+VS+ DLL
Sbjct: 3 VQDIMKTN--VITISPNTEIREIAKLLCDHHISGVPVLDFFGNLIGIVSEGDLLH----- 55
Query: 145 GSGRADNSMFPEVDS------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ N PE ++ + + L K ++MT + + + +E+
Sbjct: 56 ---KETNPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTQEVITLNKDATIEE 112
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
AA L+++ +RLP+++ DGK++GII+R +V++ ++
Sbjct: 113 AASLMIKHNVKRLPIME-DGKMIGIISRKDVIKVLIE 148
>gi|377810706|ref|YP_005043146.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357940067|gb|AET93623.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 227
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P TV A +V I+G PV+D+ KL+G++++ DL+ I G+
Sbjct: 5 DIMTTS--IITASPDMTVRHAAGTMVFAGISGMPVVDETGKLLGMITEGDLMHRAEI-GT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
G + + ++ + + +E+ K + K V DLMT V ET + D A LL
Sbjct: 62 GVKHRAWWLDMVA---STSELASQYVKEHAKTVKDLMTTDITTVTETCPVGDIAELLERR 118
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PV+ DGK+VGI++R N++RA
Sbjct: 119 RIKRVPVMR-DGKVVGIVSRSNLIRA 143
>gi|443310780|ref|ZP_21040420.1| chloride channel protein EriC [Synechocystis sp. PCC 7509]
gi|442779134|gb|ELR89387.1| chloride channel protein EriC [Synechocystis sp. PCC 7509]
Length = 891
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 43/164 (26%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKP-------TTTVDEALEILVEKRITGFPVIDDDWKL 128
AAP+ G+ +TT +V++P T T+DEA++ GFPV+DD KL
Sbjct: 433 AAPNQGL------LTTLTAENVMQPRVETLGATMTLDEAVQAFSRSHHRGFPVVDDG-KL 485
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VG+V+ D+ + + G S ++MTP+PV
Sbjct: 486 VGIVTQTDIAKMRDRTLPGDTHLS----------------------------EIMTPSPV 517
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
V + +L D LL K RLPV++ KL+GIITR +++RA
Sbjct: 518 TVSPSASLSDVLYLLDRYKLSRLPVIEQK-KLIGIITRADIIRA 560
>gi|260909469|ref|ZP_05916173.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
gi|260636394|gb|EEX54380.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
Length = 494
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 48/173 (27%)
Query: 77 APSSGVYTVGDFMTTKEELH---VVK---------PTT-----TVDEALEILVEKRITGF 119
A G+ + M+ +E+ H VVK P T TV +AL ++ + I G
Sbjct: 67 AREGGIGVIHKNMSIEEQAHEVAVVKRAENGMIYDPVTIRKGRTVKDALAMMHDYHIGGI 126
Query: 120 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179
PV+DDD +LVG+V++ DL R ++ + ++D + N
Sbjct: 127 PVVDDDNRLVGIVTNRDL----------RFEHRLDKKIDEVMTSEN-------------- 162
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
VV + T+L AA++L E K +LPVVDA+ ++VG+IT ++ +A
Sbjct: 163 -------LVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITKA 208
>gi|374385085|ref|ZP_09642595.1| inosine-5'-monophosphate dehydrogenase [Odoribacter laneus YIT
12061]
gi|373226615|gb|EHP48938.1| inosine-5'-monophosphate dehydrogenase [Odoribacter laneus YIT
12061]
Length = 489
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P TV +AL+++ E +I G PV+D+D LVG+V++ DL R + M ++
Sbjct: 104 IQPYKTVKDALDLMKEFKIGGIPVVDNDNILVGIVTNRDL----------RFETQMNRKI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ +KL++ T E+T+L+ AA +L + K +LPVVD
Sbjct: 154 QEVMTS----EKLVTTT-----------------ESTDLQKAAEILQQYKIEKLPVVDKH 192
Query: 218 GKLVGIITRGNVVRA 232
KL+G++T ++ +A
Sbjct: 193 NKLIGLVTYKDITKA 207
>gi|21225805|ref|NP_631584.1| hypothetical protein SCO7540 [Streptomyces coelicolor A3(2)]
gi|7799276|emb|CAB90898.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 223
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 11/142 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ T E +L+E IT PV+D++ + VG+VS+ DLL + G G D S
Sbjct: 17 VQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLL--QKMWG-GEPDGSAE--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ W + K + LMT P+ E+ ++ DAAR++ + +RL VVD D
Sbjct: 71 HAEWSRASA-----GKADATDAAGLMTSPPLCALESWSVVDAARVMARHRIKRLLVVDGD 125
Query: 218 GKLVGIITRGNVVRAALQIKHA 239
G+L G+++R +++R L+ A
Sbjct: 126 GRLAGVVSRSDLLRVFLRTDRA 147
>gi|299142783|ref|ZP_07035912.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
gi|298575812|gb|EFI47689.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
Length = 494
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ +TV + LE++ + I G PV+DDD KLVG+V++ DL R + M ++
Sbjct: 105 IRRGSTVKDTLELMHDYHIGGIPVVDDDNKLVGIVTNRDL----------RFERRMDKKI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V + T+L AA++L E K +LPVVD +
Sbjct: 155 D----------EVMTKEN-----------LVTTHQQTDLVAAAQILQENKIEKLPVVDKN 193
Query: 218 GKLVGIITRGNVVRA 232
+LVG+IT ++ +A
Sbjct: 194 NRLVGLITYKDITKA 208
>gi|113953851|ref|YP_730930.1| CBS domain-containing protein [Synechococcus sp. CC9311]
gi|113881202|gb|ABI46160.1| CBS domain protein [Synechococcus sp. CC9311]
Length = 156
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG----RADNSM 153
V P T + +A+ +L + I+G PV+D L+G +++ DL+ +S +G D+ +
Sbjct: 18 VTPETALKDAVSLLSDHHISGLPVVDKSGLLIGELTEQDLMVRESGVDAGPYVMLLDSVI 77
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ + W +V ++L G VGDLM E+ L AA LL E +RL V
Sbjct: 78 YLKNPLNWD--KQVHQVL----GTTVGDLMGRDLHSCLESLPLPKAASLLHERSTQRLIV 131
Query: 214 VDADGKLVGIITRGNVVRA 232
VD D VG++TRG++VRA
Sbjct: 132 VDDDKHPVGVLTRGDIVRA 150
>gi|399040053|ref|ZP_10735507.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
gi|398061938|gb|EJL53724.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
Length = 223
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 84/151 (55%), Gaps = 14/151 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+ MTT + + P V A+ ++++ I+G PV+DD+ + G++++ DLL I +
Sbjct: 5 EIMTTN--VVSISPAVGVRHAVAVMIQNNISGLPVVDDESLVCGMLTEGDLLLRREIRLA 62
Query: 147 GRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R+ S E+D +++ + ++G V D+M+ +V R + + D A L
Sbjct: 63 PRSVRSAEFISEID--------LERYIC-SHGWCVADVMSQDVIVARPDSEVSDIAESLQ 113
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLP+V+ DG+LVGI++R +++R ++
Sbjct: 114 AHRIKRLPIVE-DGRLVGIVSRRDILRIIVE 143
>gi|260771378|ref|ZP_05880304.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613694|gb|EEX38887.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP T+ +ALE+L + + T PV+DD+ +LVG+ S D L +N F
Sbjct: 233 LKPNDTIHKALELLQQNQFTALPVVDDEHELVGIFSLVDFL--------RSVENRKF--- 281
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
DS + + + K K V M APV +R T++ LL + Y +P+VD
Sbjct: 282 DSFIALYLQAK----KKAMKEVSQFMNAAPVFMRTDTHIARTIP-LLTSGYHHIPIVDNR 336
Query: 218 GKLVGIITRGNVVRAALQIK 237
+L G++T+ +++ IK
Sbjct: 337 NRLKGMVTQSDLIEFLYNIK 356
>gi|390444607|ref|ZP_10232382.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
gi|389664305|gb|EIM75806.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
Length = 153
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 25/157 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG M+TK L +P V + +E+ +K+I+G PV+DD KL+G++S+ D L + I
Sbjct: 21 TVGACMSTK--LITFRPEDPVLKVVEVFAQKKISGAPVVDDAGKLIGMISEGDCLQ-EVI 77
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ N+ P+ ST V + MT +++ +L +AA+
Sbjct: 78 --RGKYSNT--PQYPST------------------VENYMTREVRTLQQDMSLFEAAQAF 115
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
K RR PV+ A G+LVG I+ +V+R +++ T
Sbjct: 116 RVEKVRRFPVLSASGQLVGQISISDVIRVFARLQATT 152
>gi|393757933|ref|ZP_10346757.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393165625|gb|EJC65674.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 161
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T V E IL+E RI G PV D + +L+G+V++ DL+ RA +
Sbjct: 14 IAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV--------HRAADERLEPR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S WK F KT G+ +MT + V ++ AARLL + + L
Sbjct: 66 ESVWKENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSL 125
Query: 212 PVVDADGKLVGIITRGNVVR 231
PV++ + +L+GII+R ++++
Sbjct: 126 PVIENE-RLIGIISRFDLIK 144
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V DLMTP P+ + T + + AR+L+E + +PV D +G+L+GI+T G++V A
Sbjct: 3 VRDLMTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLVHRA 57
>gi|375101298|ref|ZP_09747561.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
gi|374662030|gb|EHR61908.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
Length = 201
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P +V A +L E T PV+DD ++VG+V++ D++ +GR + D+
Sbjct: 16 PDDSVKRATRLLAEHGFTALPVVDDAGRVVGVVTEADVM-------TGRVPH------DA 62
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+++ + + VG++MTPAP ++ ++ D LLE +R +PV+ A K
Sbjct: 63 RYRSGSSTGPVAG-----TVGEVMTPAPTCTQQGADVADLVGTLLEGHHRAVPVL-AGEK 116
Query: 220 LVGIITRGNVVRA 232
LVGI+TR ++VRA
Sbjct: 117 LVGIVTRRDIVRA 129
>gi|148242112|ref|YP_001227269.1| hypothetical protein SynRCC307_1013 [Synechococcus sp. RCC307]
gi|147850422|emb|CAK27916.1| CBS domain containing protein [Synechococcus sp. RCC307]
Length = 155
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSM 153
V P T + EA+++L E I+G PV+D KLVG +S+ L+A ++ +G D+ +
Sbjct: 18 VTPQTPLQEAVKLLSEHHISGLPVVDGG-KLVGELSEQQLMARETGFDAGPYVMLLDSVI 76
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ + W EV ++L G VG+LM P + L AA+LL + + +RL V
Sbjct: 77 YLKNPLQWD--KEVHQVL----GNSVGELMAGHPHTCKPDLALPAAAKLLQDRRTQRLFV 130
Query: 214 VDADGKLVGIITRGNVVRA 232
VDA LVG++TRG+VVRA
Sbjct: 131 VDAQQALVGVLTRGDVVRA 149
>gi|421589648|ref|ZP_16034763.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
gi|403705361|gb|EJZ20969.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
Length = 229
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + + P V A ++ ++ ++G PV+DD +L+G++S+ DL+ +S
Sbjct: 3 VKDVMATT--VVTLSPDNGVRHAARLMSDQHVSGIPVVDDGGRLLGVISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+AD + P +E K VGD+MT PV + E L A
Sbjct: 61 SGAFVLKADMGLGP---------DERANAFVKRCAWRVGDVMTSDPVTIDEDAPLSRVAG 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
L+ + +R+PV+ DGKL+GI++R ++++ K
Sbjct: 112 LMQDRGIKRIPVL-RDGKLIGIVSRADLLQVIYSAK 146
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+M V + + AARL+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMATTVVTLSPDNGVRHAARLMSDQHVSGIPVVDDGGRLLGVISEGDLIR 55
>gi|262197635|ref|YP_003268844.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262080982|gb|ACY16951.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
14365]
Length = 640
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G L ++ G TVG FM+T +L V P VD A ++ + I PV DD L
Sbjct: 490 GQLRSDDDWRRHGYRTVGQFMST--DLFTVHPEDLVDLAASVMDWEHIRHVPVEDDHGSL 547
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VG+++ LL L + G+ L+ ++ V D+M APV
Sbjct: 548 VGIITHRTLLRLMARRGTN-----------------------LAASSPVAVRDIMRVAPV 584
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
V T DA R++ E K LPVVD D KLVGIIT +++
Sbjct: 585 TVSPDTLTIDAIRMMREQKIGCLPVVDGD-KLVGIITESDLL 625
>gi|452949642|gb|EME55109.1| hypothetical protein H074_26412 [Amycolatopsis decaplanina DSM
44594]
Length = 201
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +T A E+L EK T PV+D+D +L+G+V++ DL+ + FP+
Sbjct: 14 VTPGSTAKHAAELLAEKGFTALPVVDEDDRLIGIVTEADLI------------RNRFPDD 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + + G VG +MT + N D R LL+ R +P+VD
Sbjct: 62 VRSGRDPEARPR-----PGLTVGQVMTMPATGMSTGANAADVGRALLDGHIRAMPIVDG- 115
Query: 218 GKLVGIITRGNVVRA 232
K+VGI+TRG+ VRA
Sbjct: 116 SKVVGIVTRGDFVRA 130
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
DLM+ V V + + AA LL E + LPVVD D +L+GI+T +++R
Sbjct: 5 DLMSAPVVTVTPGSTAKHAAELLAEKGFTALPVVDEDDRLIGIVTEADLIR 55
>gi|389690038|ref|ZP_10179055.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589556|gb|EIM29844.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 299
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
S TV D MT ++ V T V E +L KRI+ PVI D +L+G+VS+ DL+
Sbjct: 70 SSPLTVADVMT--RDVVSVSTATPVSEIANVLAGKRISAVPVIGADGRLLGIVSEGDLIR 127
Query: 140 LDSISGSGRADNSMFPEVDSTW--KTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETT 194
I R W K +V+ + +T+G+ +M P V E
Sbjct: 128 RAEIGTERR----------RPWWRKVLTDVEAEAADYVRTHGRKAQHVMRPQVVTATEAM 177
Query: 195 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L DAA ++ + + +R+PVV LVGI++R ++V+A
Sbjct: 178 TLADAADIMEKRRLKRMPVVRG-SHLVGIVSRSDLVKA 214
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V D+MT V V T + + A +L + +PV+ ADG+L+GI++ G+++R A
Sbjct: 75 VADVMTRDVVSVSTATPVSEIANVLAGKRISAVPVIGADGRLLGIVSEGDLIRRA 129
>gi|158521214|ref|YP_001529084.1| CBS domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510040|gb|ABW67007.1| CBS domain containing membrane protein [Desulfococcus oleovorans
Hxd3]
Length = 152
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT +E+ V P T + +A +L+E I G PV++ D +LVG++ DL+ +
Sbjct: 6 DIMT--KEVITVSPETDIAQATRLLLENHINGAPVVNADGELVGMLCQSDLI----VQQK 59
Query: 147 GRADNSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S+F +D ++ + ++K + K V D M+ PV V +ED A L+
Sbjct: 60 KIPLPSIFTFLDGVFSFSSTKSLEKEMQKIAATTVADAMSTDPVSVTPDATVEDVASLMA 119
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVR 231
E + +PVV+ + K+VG++ + +V++
Sbjct: 120 EKHFHTIPVVE-NSKVVGVLGKEDVLK 145
>gi|422855005|ref|ZP_16901663.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|422861990|ref|ZP_16908622.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|422864959|ref|ZP_16911584.1| CBS domain protein [Streptococcus sanguinis SK1058]
gi|327462982|gb|EGF09303.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|327474585|gb|EGF19990.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|327490143|gb|EGF21931.1| CBS domain protein [Streptococcus sanguinis SK1058]
Length = 218
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|422882791|ref|ZP_16929247.1| CBS domain protein [Streptococcus sanguinis SK355]
gi|332358281|gb|EGJ36107.1| CBS domain protein [Streptococcus sanguinis SK355]
Length = 218
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|319900081|ref|YP_004159809.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
gi|319415112|gb|ADV42223.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
Length = 491
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+++ E +I G PV+DD+ LVG+V++ DL R + + +
Sbjct: 104 IKRGSTVADALDLMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDLSKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT+++ +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMDAVSQILQEHRIEKLPVVDKD 192
Query: 218 GKLVGIITRGNVVRA 232
KLVG+IT ++ +A
Sbjct: 193 NKLVGLITYKDITKA 207
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT +D +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMDAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|307354738|ref|YP_003895789.1| putative signal transduction protein [Methanoplanus petrolearius
DSM 11571]
gi|307157971|gb|ADN37351.1| putative signal transduction protein with CBS domains
[Methanoplanus petrolearius DSM 11571]
Length = 162
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE- 156
V+ V EA IL ++RI G PV+D + +L G+V++ DLL+L + +D+ P
Sbjct: 14 VQADAKVSEAASILRKRRIGGIPVMDGE-RLAGIVTETDLLSL--LDVGELSDDLWLPSP 70
Query: 157 ---VDSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
++ + F + +K L+ + + D+M+ + + E +E+AA+L+L R
Sbjct: 71 LEIIEIPIREFVNWEKTRKALTDISESPISDIMSTDVIYIDENAEIEEAAKLMLSEGIAR 130
Query: 211 LPVVDADGKLVGIITRGNVVRA 232
LPVV +D +LVGI+TR ++VR
Sbjct: 131 LPVVKSD-RLVGIVTRQDIVRG 151
>gi|294633387|ref|ZP_06711946.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831168|gb|EFF89518.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 225
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LS 172
+++ PV++ + +++G+VS+ DLL + DS F ++++L L+
Sbjct: 25 KVSALPVLEGEGRVIGVVSEADLLPKEEFR-------------DSDPDRFTQLRRLSDLA 71
Query: 173 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
K G+LM+ V V L +AAR++ + + +RLPVV+A+G L G+++RG++++
Sbjct: 72 KAGALTAGELMSSPAVTVHPDAPLAEAARIMAQRRVKRLPVVNAEGLLEGVVSRGDLLKV 131
Query: 233 ALQ 235
L+
Sbjct: 132 FLR 134
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEI 110
+ DR + LRR S + +G LTA G+ M++ V P + EA I
Sbjct: 56 SDPDRFTQLRRLSDLAKAGALTA------------GELMSSPA--VTVHPDAPLAEAARI 101
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLL 138
+ ++R+ PV++ + L G+VS DLL
Sbjct: 102 MAQRRVKRLPVVNAEGLLEGVVSRGDLL 129
>gi|440699107|ref|ZP_20881412.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278413|gb|ELP66451.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 221
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS +V D MT + V + + ++++ + +++ PV++ + +++G+VS+ DLL
Sbjct: 2 SSSPRSVSDVMT--HTVVAVGRDASFKDIVKLMEQWKVSALPVLEGEGRVIGVVSEADLL 59
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNL 196
+ DS F ++ +L L+K G DLM + V L
Sbjct: 60 PKEEFR-------------DSDPDRFTQLSRLSDLAKAGGLTAADLMNAPAITVHADATL 106
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
AAR++ + K +RLPVV+A+G L G+++R ++++ L+
Sbjct: 107 AQAARIMAQRKVKRLPVVNAEGLLEGVVSRADLLKVFLR 145
>gi|91774375|ref|YP_544131.1| CBS domain-containing protein [Methylobacillus flagellatus KT]
gi|91708362|gb|ABE48290.1| CBS domain containing membrane protein [Methylobacillus flagellatus
KT]
Length = 410
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
G T GD M+ ++ V+ T ++EA +L+ I PVID +++G+++ +D +
Sbjct: 246 GEITCGDIMS--RDVVSVEYGTLLEEAWPLLLNHHIKALPVIDRAHRVIGIITRFDFMK- 302
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
A+ +P + + F L+ ++VG +MT + V E T++
Sbjct: 303 -------HANLEAYPGFEEKLRKFIRRTFLVETDKPEVVGQIMTSKVLTVSEDTHIVQLV 355
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
LL E +PV+D + +LVGI+T+ +++ AAL E GA
Sbjct: 356 PLLSERGIHHVPVLDHERRLVGIVTQTDLI-AALYRGRLEETGA 398
>gi|449137048|ref|ZP_21772381.1| CBS domain-containing protein [Rhodopirellula europaea 6C]
gi|448884323|gb|EMB14823.1| CBS domain-containing protein [Rhodopirellula europaea 6C]
Length = 156
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 25/127 (19%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
EAL++L+ +RI+G PV+D+D G+ S+ + + G + P
Sbjct: 25 EALDVLLRQRISGAPVVDEDGHFAGVFSEKSCMKF--VVGMAYENLPSIP---------- 72
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
VGDL P + E T+L A+ L+ RRLPV+D+DGKL G I+
Sbjct: 73 -------------VGDLTDKNPPTISEETDLLTIAQTFLDAACRRLPVLDSDGKLRGQIS 119
Query: 226 RGNVVRA 232
R +V+RA
Sbjct: 120 RRDVMRA 126
>gi|329962623|ref|ZP_08300571.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
12057]
gi|328529654|gb|EGF56552.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
12057]
Length = 491
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDEKYLVGIVTNRDL----------RFEKDMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKDN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 GKLVGIITRGNVVRA 232
KLVG+IT ++ +A
Sbjct: 193 NKLVGLITYKDITKA 207
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TK+ + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKDNIITTNPTTDMEAVSQILQEHRIEKLPVVDKENKLVGLITYKDI 204
>gi|298345503|ref|YP_003718190.1| putative acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
gi|298235564|gb|ADI66696.1| possible acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
Length = 206
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A+E++ IT PV+ D KL G+VS DL N P D+T
Sbjct: 13 TVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRALPS-DATSL 57
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
+F EV LLSK + +M P + LE+AA L+ +TK LPV+D +GK+VG
Sbjct: 58 SFGEVAYLLSKLK---IYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLD-EGKVVG 113
Query: 223 IITRGNVVRAALQIKHATEMGAQ 245
+IT +V+ A + I A E G +
Sbjct: 114 VITESDVLDAFIDINGAREPGTR 136
>gi|124028008|ref|YP_001013328.1| hypothetical protein Hbut_1146 [Hyperthermus butylicus DSM 5456]
gi|123978702|gb|ABM80983.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 240
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 23/157 (14%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P + V +FM + + V+PTT V + ++++ KR PV+ + KL+G+++++DL
Sbjct: 104 PEKLMKPVEEFM--ERNVVYVEPTTPVYKVWQVMMSKRFAALPVVSEG-KLIGVIAEHDL 160
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ + G R D +++ + +++ G +V +LM+ PV V T L
Sbjct: 161 I----VRGFARPD----------FESPSGIRR------GPLVRELMSTPPVTVLPTVPLL 200
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
AARL++E R+ VVD D L+G++ R ++VRA L
Sbjct: 201 SAARLIVERYIGRVYVVDDDESLLGVVDRSDIVRAWL 237
>gi|317504769|ref|ZP_07962728.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
15606]
gi|315664100|gb|EFV03808.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
15606]
Length = 494
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ ++V +AL ++ + I G PV+DDD KLVG+V++ DL R + M ++
Sbjct: 105 IRRGSSVKDALALMHDYHIGGIPVVDDDNKLVGIVTNRDL----------RFERHMDKKI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V + T+L AA++L E K +LPVVD D
Sbjct: 155 D----------EVMTKDN-----------LVTTHQQTDLGAAAQILQENKIEKLPVVDKD 193
Query: 218 GKLVGIITRGNVVRA 232
LVG+IT ++ +A
Sbjct: 194 NHLVGLITYKDITKA 208
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
M PV +R ++++DA L+ + +PVVD D KLVGI+T
Sbjct: 98 MIYDPVTIRRGSSVKDALALMHDYHIGGIPVVDDDNKLVGIVT 140
>gi|116249487|ref|YP_765325.1| hypothetical protein pRL90028 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254135|emb|CAK03738.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 214
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 170
+++ +I+G PV+D + LVG+VSD D L ++ + R + + + S K +E
Sbjct: 1 MLDNKISGLPVVDANGALVGIVSDGDFLRRSELN-TERKRSWLLEWLTSPGKIADE---- 55
Query: 171 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+ +G+ V ++MT + T ++ DA RL+ +RLPVV DG+LVGI+ R +++
Sbjct: 56 YVRAHGRRVEEVMTAPVSAIAPTASISDAVRLMERRDIKRLPVV-TDGRLVGIVARSDLL 114
Query: 231 RAALQIKHATEMGA 244
RA Q A + A
Sbjct: 115 RALSQALPAAAVSA 128
>gi|422875867|ref|ZP_16922337.1| CBS domain protein [Streptococcus sanguinis SK1056]
gi|332362303|gb|EGJ40103.1| CBS domain protein [Streptococcus sanguinis SK1056]
Length = 218
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|125718523|ref|YP_001035656.1| hypothetical protein SSA_1724 [Streptococcus sanguinis SK36]
gi|125498440|gb|ABN45106.1| CBS domain protein, putative [Streptococcus sanguinis SK36]
Length = 218
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|357633243|ref|ZP_09131121.1| protein of unknown function DUF190 [Desulfovibrio sp. FW1012B]
gi|357581797|gb|EHJ47130.1| protein of unknown function DUF190 [Desulfovibrio sp. FW1012B]
Length = 408
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V PT + + +++L+ + + PVI ++ K+ G+V+ DLLA + N + +V
Sbjct: 123 VSPTDPLPKVVDLLLARGVKAVPVIGENGKVAGVVTGGDLLARGGMDTRLSLQNILPDDV 182
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + ++ G D+MT V + E L +AA+++ +RLPVVD
Sbjct: 183 RAGER---------ARMAGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRLPVVDEA 233
Query: 218 GKLVGIITRGNVVRAALQIKHATE 241
G+L+GI++R +++R+A + A E
Sbjct: 234 GELIGIVSRADILRSASDLAPAAE 257
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 37 LLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLT-ANSAAPSSGVYTVGDFMTTKEEL 95
++SR G + V+ + + + + R+ + ++ L A A P +T G F ++ +
Sbjct: 218 VMSRKGLKRLPVVDEAGELIGIVSRADILRSASDLAPAAEALPR---FTAGLFQQARDVM 274
Query: 96 HVVKPTTTVDEALEILVEKRITGFP-----VIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
PT D L +V R+ P VID D K+ G+V D DLL GR
Sbjct: 275 FTDVPTAAPDTPLPEVV-ARLVASPLRRVVVIDADRKVRGIVLDGDLL--------GRCG 325
Query: 151 NSMFPEVDSTWKTF--NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
P + +F E + + + M ++ T V E T L D + +L T+
Sbjct: 326 PERKPGLLKALFSFGREEAACPMGRASEVMQANVYT-----VSEDTPLMDVLQRMLTTRA 380
Query: 209 RRLPVVDADGKLVGIITRGNVVR 231
+RL VVD +GKL+G++ R +++R
Sbjct: 381 KRLVVVDDEGKLLGMVDRESLLR 403
>gi|148655070|ref|YP_001275275.1| hypothetical protein RoseRS_0916 [Roseiflexus sp. RS-1]
gi|148567180|gb|ABQ89325.1| CBS domain containing protein [Roseiflexus sp. RS-1]
Length = 225
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 23/156 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T V+ PT T+ EA ++ ++RI P++++ KL G+++ DL
Sbjct: 6 VADWMSTPAI--VIAPTATLAEAQRLMEQRRIRRLPIVENG-KLAGIITRGDL------- 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S P VD+T ++ E + LL + V + MT + + + DAARL+L
Sbjct: 56 ------RSAQP-VDTTL-SYYEWRALLDRVT---VAECMTRHVITITPDASTLDAARLML 104
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
+ K LPVVD +G++VGIIT ++ R LQI AT
Sbjct: 105 KHKIGGLPVVDDEGRVVGIITESDLFR--LQIALAT 138
>gi|14590227|ref|NP_142293.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus horikoshii OT3]
gi|6647544|sp|O58045.1|IMDH_PYRHO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|109157383|pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|109157384|pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|3256697|dbj|BAA29380.1| 486aa long hypothetical inosine-5'-monophosphate dehydrogenase
[Pyrococcus horikoshii OT3]
Length = 486
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 35/138 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD AL ++ + I G PV++D+ K+VG+++ D+ A +
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E+ +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVV 230
VVD GKLVG+IT ++V
Sbjct: 186 VVDERGKLVGLITMSDLV 203
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G V + MT +E+ V + V+EAL+I++E RI PV+D+ KL
Sbjct: 137 GIITKKDIAAREG-KLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKL 193
Query: 129 VGLVSDYDLLALDSISGSGRADNS 152
VGL++ DL+A + R +N
Sbjct: 194 VGLITMSDLVARKKYKNAVRDENG 217
>gi|430760272|ref|YP_007216129.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430009896|gb|AGA32648.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 160
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
VD +++LVE+R+ G PV+D D L+G+V+ DL + ++ + D F
Sbjct: 20 VDALVDLLVERRVNGVPVVDADGVLLGMVTTGDL--IHRVADARVEDRGSFWRESFYKSV 77
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
F + G ++M+ P V + ++ AARLL+E + + LPV+D +G+LVG+
Sbjct: 78 FRPNGPEPNPAEGATAAEVMSRNPAFVAPSDDMAVAARLLIEHRVKSLPVLD-NGRLVGM 136
Query: 224 ITRGNVVRA 232
I+R +++R
Sbjct: 137 ISRLDLLRC 145
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
V +LMTPAPV V ++ LL+E + +PVVDADG L+G++T G+++
Sbjct: 3 VRELMTPAPVTVPSEMPVDALVDLLVERRVNGVPVVDADGVLLGMVTTGDLI 54
>gi|239906344|ref|YP_002953085.1| hypothetical protein DMR_17080 [Desulfovibrio magneticus RS-1]
gi|239796210|dbj|BAH75199.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 412
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + E +++LV + + PV+D K++G+V+ DLL +S A S+F +
Sbjct: 123 VGPDTDLGEVVDLLVARHVKAVPVVDAGRKVLGVVTGGDLLTRGGLS----ARLSLFGLL 178
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + + +G V ++MT + E T+L +A+ +++ +RLPVVD
Sbjct: 179 PADAREEAA-----AALSGHTVKEVMTAPAETIGERTSLREASERMVKKGLKRLPVVDEA 233
Query: 218 GKLVGIITRGNVVRAALQI 236
G+L+GI++R +++RAA ++
Sbjct: 234 GELIGIVSRTDILRAAAKV 252
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP-----VIDDDWKLVGLVSDYDL 137
+T G ++ L PT DE+L + V R+ P V+D K+ G+V D DL
Sbjct: 263 FTAGLMQQARDVLITDVPTARPDESL-LDVASRLVASPLRRVVVLDAAGKVAGIVHDGDL 321
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
LA S ++F + D V G+ M V E L
Sbjct: 322 LARCGPSKRPGILQALFGKKDDEAAGVCPVGT---------AGEAMQTTVYSVAEDAALT 372
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
D + ++ +RL V D DGKL G++ R V+RA
Sbjct: 373 DVLQKMIVHGVKRLVVTDDDGKLRGMVDREAVLRA 407
>gi|167753424|ref|ZP_02425551.1| hypothetical protein ALIPUT_01698 [Alistipes putredinis DSM 17216]
gi|167658049|gb|EDS02179.1| inosine-5'-monophosphate dehydrogenase [Alistipes putredinis DSM
17216]
Length = 490
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 32/129 (24%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +AL ++ E +I G PV+ D L+G+V++ DL R M ++D
Sbjct: 109 TVGDALALMKENKIGGIPVVAPDQHLIGIVTNRDL----------RFQRDMNRKID---- 154
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
++MT +V ++L+ AA +LL K +LPVVDADGKLVG
Sbjct: 155 ------------------EVMTKEGLVTTHNSDLQRAADILLRNKIEKLPVVDADGKLVG 196
Query: 223 IITRGNVVR 231
+IT ++ +
Sbjct: 197 LITYKDITK 205
>gi|298291193|ref|YP_003693132.1| hypothetical protein Snov_1194 [Starkeya novella DSM 506]
gi|296927704|gb|ADH88513.1| CBS domain containing membrane protein [Starkeya novella DSM 506]
Length = 228
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
K T V + + L+E+RI+G P++DD K+VG+VS+ DL+ R + VD
Sbjct: 15 KTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIRRAEAGTERRRSWWLQAFVD 74
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ K +G+ D+M PV T L + A L+ +R+P+V+ G
Sbjct: 75 D-----GTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVE-KG 128
Query: 219 KLVGIITRGNVVRAALQIKHATEM 242
LVGI++R N+++A K E+
Sbjct: 129 HLVGIVSRSNLIQAVAGTKMGLEI 152
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 181 DLMTPAPVVVRETTNLE-DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+MT +PV+ +TT+L A+ LLE + +P+VD GK+VGI++ G+++R A
Sbjct: 5 DVMT-SPVITAKTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIRRA 57
>gi|298290161|ref|YP_003692100.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296926672|gb|ADH87481.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 228
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
K T V + + L+E+RI+G P++DD K+VG++S+ DL+ R + VD
Sbjct: 15 KATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIRRAEAGTERRRSWWLQAFVD 74
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ K +G+ D+M PV T L + A L+ +R+P+V+ G
Sbjct: 75 D-----GTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVE-KG 128
Query: 219 KLVGIITRGNVVRAALQIKHATEM 242
LVGI++R N+++A K E+
Sbjct: 129 HLVGIVSRSNLIQAVAGTKMGLEI 152
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 181 DLMTPAPVVVRETTNLE-DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+MT +PV+ + T+L A+ LLE + +P+VD GK+VGII+ G+++R A
Sbjct: 5 DVMT-SPVITAKATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIRRA 57
>gi|422884639|ref|ZP_16931087.1| CBS domain protein [Streptococcus sanguinis SK49]
gi|332359069|gb|EGJ36890.1| CBS domain protein [Streptococcus sanguinis SK49]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + ++ G+IT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QIYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|239621972|ref|ZP_04665003.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239515163|gb|EEQ55030.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 683
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++G PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSGLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|406662595|ref|ZP_11070687.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
gi|405553460|gb|EKB48685.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
Length = 152
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T L ++D LE+L +++I+G PV+D + +L+G++S+ D L I
Sbjct: 22 VKDHMST--SLVTFHAEDSIDHVLEVLTKRKISGAPVVDKEGRLIGIISEVD--CLKEII 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
++ FP V D MT + + +L DAA+ L
Sbjct: 78 KGKYSNTPKFPGT---------------------VADHMTEDVITLSPDLSLFDAAQKFL 116
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
+ K RR PV+ DGKL+G I+ +V+RA +++ T
Sbjct: 117 DLKIRRFPVL-KDGKLIGQISLSDVIRAFPKLRSTT 151
>gi|385260148|ref|ZP_10038297.1| CBS domain protein [Streptococcus sp. SK140]
gi|385192068|gb|EIF39478.1| CBS domain protein [Streptococcus sp. SK140]
Length = 218
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPV+D +G++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVID-NGQVYGVITDRDVFRAFLEISGYGEEG 140
>gi|86361220|ref|YP_473107.1| hypothetical protein RHE_PF00490 [Rhizobium etli CFN 42]
gi|86285322|gb|ABC94380.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 225
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 83/145 (57%), Gaps = 10/145 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + + P +V A+ ++++ ++G PV+DD ++ G+V++ DLL + +
Sbjct: 5 DIMTTT--VVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVRYA 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + PE+ S ++++ + +NG V D+M+ +V R + + D A L
Sbjct: 63 PRPARA--PELISEI----DLERYIG-SNGWCVADVMSQDVIVARPDSEVSDIAESLQVH 115
Query: 207 KYRRLPVVDADGKLVGIITRGNVVR 231
+ +RLP+V+ D +LVGI++R +++R
Sbjct: 116 RIKRLPIVE-DERLVGIVSRRDILR 139
>gi|60686976|gb|AAX35684.1| CBS domain-like protein [Acidithiobacillus caldus]
Length = 158
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T V E IL+E RI G PV D + +L+G+V++ DL+ RA +
Sbjct: 14 IAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV--------HRAADERLEPR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S WK F KT G+ +MT + V ++ AARLL + + L
Sbjct: 66 ESVWKENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSL 125
Query: 212 PVVDADGKLVGIITRGNVVR 231
PV++ + +L+GII+R ++++
Sbjct: 126 PVIENE-RLIGIISRFDLIK 144
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V DLMTP P+ + T + + AR+L+E + +PV D +G+L+GI+T G++V A
Sbjct: 3 VRDLMTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLVHRA 57
>gi|254381637|ref|ZP_04997001.1| CBS [Streptomyces sp. Mg1]
gi|194340546|gb|EDX21512.1| CBS [Streptomyces sp. Mg1]
Length = 216
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV D MT + + V E + ++T PVI+ + ++VG+VS+ DLL +
Sbjct: 6 YTVNDVMT--KTVVTVTAAAEFKEIATAMERWKVTAVPVIEGEGRVVGVVSEADLLTKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G P + + + +K LMT V +R L AARL
Sbjct: 64 FHAQG-------PSLIEQMRRLGDT----AKAGSVRAEQLMTSPAVTIRPDATLPRAARL 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + +RLPVVDA+G L+GI++R ++++ L+
Sbjct: 113 MADRHIKRLPVVDANGTLLGIVSRADLLKVFLR 145
>gi|337270486|ref|YP_004614541.1| putative signal transduction protein with CBS domains
[Mesorhizobium opportunistum WSM2075]
gi|336030796|gb|AEH90447.1| putative signal transduction protein with CBS domains
[Mesorhizobium opportunistum WSM2075]
Length = 232
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P+ +V +A +++ +I+G PVI +D +L+G+VS+ D L + G+ R +
Sbjct: 14 VDPSASVADAAALMLANKISGLPVIRNDGELMGIVSEGDFLRRREL-GTQRKRPRWLEFL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S K E NG+ + ++M+ + V TT+L L+ R+PV+ A+
Sbjct: 73 ISPGKAAEE----YVLANGRRIEEVMSESVVTASPTTSLATVVELMTRHHVNRIPVL-AE 127
Query: 218 GKLVGIITRGNVVRA 232
GK+VGI+TR ++VRA
Sbjct: 128 GKVVGIVTRSDLVRA 142
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V + ++ DAA L+L K LPV+ DG+L+GI++ G+ +R
Sbjct: 6 IMTTPVIAVDPSASVADAAALMLANKISGLPVIRNDGELMGIVSEGDFLR 55
>gi|423074979|ref|ZP_17063698.1| CBS domain protein [Desulfitobacterium hafniense DP7]
gi|361853928|gb|EHL06043.1| CBS domain protein [Desulfitobacterium hafniense DP7]
Length = 160
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + + P T + E ++L + I+G PVID L+G+VS+ DLL ++
Sbjct: 14 VQDIMQTN--VITISPNTEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLHKET-- 69
Query: 145 GSGRADNSM-FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R ++ F ++ + + L K ++MT + + + ++E+AA L+
Sbjct: 70 -HPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTHEVITLDKDASIEEAASLM 128
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLP+++ +GK+VGIITR +V++ ++
Sbjct: 129 INHNVKRLPIME-NGKMVGIITRKDVIKVLIE 159
>gi|386391963|ref|ZP_10076744.1| hypothetical protein DesU5LDRAFT_1345 [Desulfovibrio sp. U5L]
gi|385732841|gb|EIG53039.1| hypothetical protein DesU5LDRAFT_1345 [Desulfovibrio sp. U5L]
Length = 408
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + + +++L+ +R+ PVI ++ K+ G+V+ DLL+ + N + +V
Sbjct: 123 VSPDDPLPKVVDLLLARRVKAVPVIGENGKVAGVVTGGDLLSRGGMDTRLSLQNILPDDV 182
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + ++ G D+MT V + E L +AA+++ +RLPVVD
Sbjct: 183 RAGER---------ARMAGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRLPVVDET 233
Query: 218 GKLVGIITRGNVVRAALQIKHATE 241
G+L+GI++R +++R+A + A E
Sbjct: 234 GELIGIVSRADILRSASDLAPAAE 257
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 37 LLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLT-ANSAAPSSGVYTVGDFMTTKEEL 95
++SR G + V+ + + + + R+ + ++ L A A P +T G F ++ +
Sbjct: 218 VMSRKGLKRLPVVDETGELIGIVSRADILRSASDLAPAAEALPR---FTAGLFQQARDVM 274
Query: 96 HVVKPTTTVDEALEILVEKRITGFP-----VIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
PT D L +V R+ P VID D + G+V D DLL GR
Sbjct: 275 FTDVPTAAPDTPLPEVV-ARLVASPLRRVVVIDADRTVRGIVLDGDLL--------GRCG 325
Query: 151 NSMFPEVDSTWKTF--NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
P + +F E L + + M ++ T V E T L D + +L T+
Sbjct: 326 PERKPGLLKALFSFGREETACPLGRASEVMQTNVYT-----VSEDTPLMDVLQRMLTTRA 380
Query: 209 RRLPVVDADGKLVGIITRGNVVR 231
+RL VVD +G+L+G++ R +++R
Sbjct: 381 KRLVVVDDEGRLLGMVDRESLLR 403
>gi|13475518|ref|NP_107082.1| hypothetical protein mll6611 [Mesorhizobium loti MAFF303099]
gi|14026270|dbj|BAB52868.1| mll6611 [Mesorhizobium loti MAFF303099]
Length = 232
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 22/164 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P+ ++ EA +++ K+++G PVI +D +LVG+VS+ D L + G+ R + +
Sbjct: 14 IDPSASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLRRGEL-GTERKRSRWLEFL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +E + NG+ V ++M+ V +L L+ +R+P +
Sbjct: 73 VTPGRAADE----YVRANGRRVEEVMSQDVVTASPAASLAKVVELMTRRHVKRIPATEG- 127
Query: 218 GKLVGIITRGNVVRAAL--------------QIKH--ATEMGAQ 245
GK+VGIITR +++RA L QI+H ATE+ Q
Sbjct: 128 GKVVGIITRSDLLRALLGVLPDGAATVIDDEQIRHNIATELAKQ 171
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 178 MVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
M + + PVV + + ++ +AA L+L K LPV+ DG+LVGI++ G+ +R
Sbjct: 1 MQAEAIMSKPVVGIDPSASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLR 55
>gi|412986258|emb|CCO17458.1| inosine-5'-monophosphate dehydrogenase [Bathycoccus prasinos]
Length = 399
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 91/215 (42%), Gaps = 47/215 (21%)
Query: 42 GCRVFSVLATSSDRVSAL---------------RRSSAVFASGTLTANSAAPSSGVYTVG 86
G R F V ++SSD + R SA A ++ AA S V
Sbjct: 29 GQRAFKVFSSSSDNETTFEGGEKEIGKLHLDGGRSMSASKAEDPDMSDEAAISWPYSRVE 88
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+FMT E + + D ++ + KR G PV+D+D LVG++S D+ L IS
Sbjct: 89 EFMTKDPET-LCESLKLTDVKVKSFI-KRYHGGPVVDEDGNLVGVISRNDVKRLSYIS-- 144
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
F E Q+ + + V D MT P+ V + AA L+L+
Sbjct: 145 -----------------FGEEQRHI-----RTVADAMTSMPLTVGPKAYISAAAGLMLKH 182
Query: 207 KYRRLPVVDAD------GKLVGIITRGNVVRAALQ 235
K RLPVV+ GKL+GIITR ++ +Q
Sbjct: 183 KIHRLPVVEEGEDYAHPGKLIGIITRSDIWEPLIQ 217
>gi|148264366|ref|YP_001231072.1| hypothetical protein Gura_2320 [Geobacter uraniireducens Rf4]
gi|146397866|gb|ABQ26499.1| CBS domain containing protein [Geobacter uraniireducens Rf4]
Length = 150
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 19/159 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MT +++ VK TTV E E+ R++ FPV+DD+ +L+G+V++ DL+
Sbjct: 3 TAADVMT--KDVITVKTGTTVRELAELFTANRMSSFPVVDDNGELIGIVTETDLI----- 55
Query: 144 SGSGRADNSM-FPEVDS--TWKTFNEVQKLLSKT----NGKMVGDLMTPAPVVVRETTNL 196
D S+ P V S W + E +K K G+ VGD+ T V+ T+ L
Sbjct: 56 ----EQDKSLHIPTVISLFDWVIYLESEKKFEKELKKMTGQTVGDIYTEDVESVKSTSLL 111
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ A ++ K +PVVD D KLVG+I+R +++R +
Sbjct: 112 SEVADIMSSKKIHAVPVVD-DKKLVGVISRIDLIRTMIN 149
>gi|119715234|ref|YP_922199.1| hypothetical protein Noca_0991 [Nocardioides sp. JS614]
gi|119535895|gb|ABL80512.1| CBS domain containing protein [Nocardioides sp. JS614]
Length = 196
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E V+P+TTV AL L E IT PV+D +L G+VS+ DL+ D ++
Sbjct: 3 VQDLMTP--EPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIR-DVVA 59
Query: 145 GSGRADN------SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
RA +FP +T EV T PV VR +L
Sbjct: 60 PDPRAQERPVTIEPVFPP-----RTVEEV---------------YTRHPVSVRRNDDLAR 99
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
A ++ T + LPVVD +G+LVG+++R +VV+
Sbjct: 100 AVDVMTSTAVKSLPVVDDEGRLVGVVSRSDVVQ 132
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V DLMTP P+ VR +T ++ A L E LPVVD G+L G+++ +++R
Sbjct: 2 LVQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIR 55
>gi|455650952|gb|EMF29706.1| transport protein [Streptomyces gancidicus BKS 13-15]
Length = 224
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTV--DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--A 139
TV + MT VVK + E + +L E +T PV+DD + +G+VS+ DLL +
Sbjct: 5 TVAELMTRD----VVKARRDLPFKEIVRLLAENDVTAVPVVDDLGRPMGVVSEADLLRKS 60
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
D SGR P +++ W+ +K G +LM+ V R ++ +A
Sbjct: 61 SDQADPSGRVP---VPHLEA-WER--------AKAEGSRAEELMSAPAVCARPEWSVVEA 108
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
ARL+ +RLPVVD +L+GI++RG+++R L+
Sbjct: 109 ARLMEAQHVKRLPVVDETDRLLGIVSRGDLLRVFLR 144
>gi|304391059|ref|ZP_07373011.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|304325942|gb|EFL93188.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 212
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A+E++ IT PV+ D KL G+VS DL N P D+T
Sbjct: 19 TVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRALPS-DATSL 63
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
+F EV LLSK + +M P + LE+AA L+ +TK LPV+D +GK+VG
Sbjct: 64 SFGEVAYLLSKLK---IYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLD-EGKVVG 119
Query: 223 IITRGNVVRAALQIKHATEMGAQ 245
+IT +V+ A + I A E G +
Sbjct: 120 VITESDVLDAFIDINGAREPGTR 142
>gi|294496296|ref|YP_003542789.1| XRE family transcriptional regulator [Methanohalophilus mahii DSM
5219]
gi|292667295|gb|ADE37144.1| putative transcriptional regulator, XRE family [Methanohalophilus
mahii DSM 5219]
Length = 154
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEVD 158
P V +A L + I+G PV+D+ +VG++S+ DLLAL I G S F ++
Sbjct: 16 PEDKVSDAARSLKDNDISGMPVVDNG-NIVGILSEVDLLALLEIPEHGDFWLPSPFEVIE 74
Query: 159 STWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ F + +K+LS V +M V ++EDA+ L+ K RLPVV+
Sbjct: 75 IPIREFISWEDTKKMLSDVGSMPVSKIMRYGVFTVSPEDSIEDASHLMSRHKINRLPVVE 134
Query: 216 ADGKLVGIITRGNVVRA 232
D KL GIITRG+++R
Sbjct: 135 ND-KLTGIITRGDIIRG 150
>gi|260654571|ref|ZP_05860061.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|424844536|ref|ZP_18269147.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
gi|260630587|gb|EEX48781.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|363985974|gb|EHM12804.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
Length = 154
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL--LA 139
+ T GD M K +L V T TV +AL +L R++G PV+D W+LVG S+ D LA
Sbjct: 4 IMTAGDLM--KRDLSAVLETDTVADALRVLHSHRLSGVPVVDAYWRLVGFFSEADALELA 61
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVVRETTN 195
L + + + ++ +F E +KLLS ++ V M P+ V + +
Sbjct: 62 LPTTAQILQQESFLFDE-----------EKLLSAQFARIYSQPVSKYMQRPPLSVHPSAH 110
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ A+L+L+ K R+ V D D LVG++ + + L
Sbjct: 111 ILSVAQLMLDKKLYRIAVTDRD-VLVGVLDQSDFCEYLL 148
>gi|85716127|ref|ZP_01047103.1| hypothetical protein NB311A_11125 [Nitrobacter sp. Nb-311A]
gi|85697126|gb|EAQ35008.1| hypothetical protein NB311A_11125 [Nitrobacter sp. Nb-311A]
Length = 147
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 21/149 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV +MT ++ V T+ E ++ +PV+DD VGLV+ +D L ++
Sbjct: 8 TVDRYMT--RQVKTVSCDVTMQELNDLFASDDFNAYPVVDDQGDAVGLVTKFDFLKCFAL 65
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ S SM P D K + V D M + V TT L +L+
Sbjct: 66 TLS-----SMVPRYDELMK--------------RTVSDTMVHEFIYVSATTKLVRVLQLM 106
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+E + R +PV+D + LVGII+R +V+RA
Sbjct: 107 VEHRLRSVPVMDTEQHLVGIISREDVMRA 135
>gi|219667093|ref|YP_002457528.1| signal transduction protein with CBS domains [Desulfitobacterium
hafniense DCB-2]
gi|219537353|gb|ACL19092.1| putative signal transduction protein with CBS domains
[Desulfitobacterium hafniense DCB-2]
Length = 149
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + + P T + E ++L + I+G PVID L+G+VS+ DLL ++
Sbjct: 3 VQDIMQTN--VITISPNTEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLHKET-- 58
Query: 145 GSGRADNSM-FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R ++ F ++ + + L K ++MT + + + +E+AA L+
Sbjct: 59 -HPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTHEVITLEKDAAIEEAASLM 117
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLP+++ +GK+VGIITR +V++ ++
Sbjct: 118 INHNVKRLPIME-NGKMVGIITRKDVIKVLIE 148
>gi|395777163|ref|ZP_10457678.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 221
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT + V + + + ++ E R++ PV + + ++VG+VS+ DLL +
Sbjct: 6 HVVSDVMT--HTVVSVGRDASFKDIVRLMREWRVSALPVTEGEDRVVGVVSEADLLCKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
D + ++++L L K G DLMT + VR T L AA
Sbjct: 64 FR-------------DDDPDRYTQLRRLRDLEKAGGVRARDLMTSPALSVRADTTLAQAA 110
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
R++ +RLPVVDA G+L GI++R ++++ L+
Sbjct: 111 RVMARASVKRLPVVDALGRLEGIVSRADLLKVFLR 145
>gi|344203160|ref|YP_004788303.1| hypothetical protein [Muricauda ruestringensis DSM 13258]
gi|343955082|gb|AEM70881.1| CBS domain containing membrane protein [Muricauda ruestringensis
DSM 13258]
Length = 153
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 83/153 (54%), Gaps = 26/153 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT +L P +++E +E L+ +I+G PV++++ +L+G++S+ D + IS
Sbjct: 22 VSDYMT--RDLITFSPDQSIEEVIEALIRHKISGGPVVNENNELIGIISEGD--CIKHIS 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + M SK +M+ ++ T + N+ DAA++ L
Sbjct: 78 DSRYYNLPMEH----------------SKVELRMIKNVET-----IDGNMNIFDAAKMFL 116
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
E + RR P+++ +GKLVG I++ ++++A + IK
Sbjct: 117 EVRRRRFPILE-NGKLVGQISQKDILKATMGIK 148
>gi|259048099|ref|ZP_05738500.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
gi|259035160|gb|EEW36415.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
Length = 213
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 20/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T + V P TTV +AL+++ E I PV++D KLVGL+++ +L+A S S
Sbjct: 3 VKDYMSTN--VITVTPETTVMKALDLMKEHDIHRLPVVED-GKLVGLLTE-ELVAGHSPS 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ T + +E+ LL+KT ++M + V+ T LE+AA L+
Sbjct: 59 MA-------------TSLSMHELNYLLNKTTA---SEIMQKQVLTVKAHTLLEEAASLMR 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ K LPVVDA G + GIIT ++ A ++I
Sbjct: 103 QQKVGVLPVVDARGHVEGIITDKDIFDAFIEI 134
>gi|298674758|ref|YP_003726508.1| hypothetical protein Metev_0814 [Methanohalobium evestigatum
Z-7303]
gi|298287746|gb|ADI73712.1| CBS domain containing membrane protein [Methanohalobium evestigatum
Z-7303]
Length = 155
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI-SGSGRADNSMFPEV 157
K + ++ +IL + I+G PV+DD +VG++S+ DLL I G S F +
Sbjct: 15 KSSDSIRSTAQILKKNGISGVPVVDDKNNIVGVISEEDLLRFLEIPDHRGLWLPSPFEVI 74
Query: 158 DSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + F E + +LS K V +M + + +E A++L+ + K RLPV+
Sbjct: 75 EIPIREFVSWEETKHMLSDFGDKKVQQVMKTDVLTITPEDTIEYASQLMTKHKINRLPVI 134
Query: 215 DADGKLVGIITRGNVVRA 232
+ DGKL+GI+TRG+++
Sbjct: 135 E-DGKLIGIVTRGDIIEG 151
>gi|91975830|ref|YP_568489.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
BisB5]
gi|91682286|gb|ABE38588.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 168
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 76 AAPSSGVYTVG----DFMTTKEELHVVKPTTTVDEA-----LEILVEKR-ITGFPVIDDD 125
PS+ V +G F+ H+ +P +V LE E+ +PV++D
Sbjct: 14 CTPSTAVRLIGISLYKFLEAIVADHMTRPVKSVSREMTMRELEDQFERDDYNAYPVLEDS 73
Query: 126 WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 185
+ +GLV+ YD L + + M P D L+++T VGD+MTP
Sbjct: 74 -RAIGLVTKYDFLNCFAFHPT-----QMLPHYDD----------LMNRT----VGDIMTP 113
Query: 186 APVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ V T L +L++E + R +PV+DAD KL GII+R +V++A
Sbjct: 114 DFIYVHADTKLTRVLQLMVEHQTRSIPVLDADRKLEGIISREDVIKA 160
>gi|390941712|ref|YP_006405473.1| hypothetical protein Belba_0046 [Belliella baltica DSM 15883]
gi|390415140|gb|AFL82718.1| CBS domain-containing protein [Belliella baltica DSM 15883]
Length = 152
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
+ +AAP V D M+T L P T+D LE+L +++I+G V+D LVG+
Sbjct: 13 SKKAAAP----ILVQDHMST--NLVTFYPEDTIDHVLELLTKRKISGAAVVDQSGHLVGI 66
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
+S+ D L I ++ FP V + MT + ++
Sbjct: 67 ISEVD--CLKEIIKGKYSNTPKFPGT---------------------VAEHMTKDVITLK 103
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
+L DAA+L L+ K RR PV+ D KLVG ++ +V+RA ++K T
Sbjct: 104 PDLSLFDAAQLFLDKKIRRFPVM-KDEKLVGQLSLSDVIRAFPKLKDTT 151
>gi|322391656|ref|ZP_08065124.1| CBS domain protein [Streptococcus peroris ATCC 700780]
gi|321145467|gb|EFX40860.1| CBS domain protein [Streptococcus peroris ATCC 700780]
Length = 218
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P T V A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTNVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD +G+L G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NGQLYGVITDRDVFRAFLEIAGYGEEG 140
>gi|220905178|ref|YP_002480490.1| hypothetical protein Ddes_1916 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869477|gb|ACL49812.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 219
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MTT ++ V P T++ + +++ + + PV+DD ++VG++SD D+
Sbjct: 3 VQNWMTT--DVVSVTPETSLLKVGKLMKDHHVRRLPVLDDKGRVVGIISDRDV------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T + E+ LL++ K ++MT P+ V+ + +E AA ++L
Sbjct: 54 ----RDAS--PSKATTLDMY-EMHYLLAELKAK---NIMTANPMTVKPSDTVEQAALIML 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVV+ GKLVGII+ +V +A + I A G Q
Sbjct: 104 DNKIGGLPVVEDSGKLVGIISDHDVFKALVDITGARLGGLQ 144
>gi|146320503|ref|YP_001200214.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|253751473|ref|YP_003024614.1| hypothetical protein SSUSC84_0586 [Streptococcus suis SC84]
gi|253753374|ref|YP_003026515.1| hypothetical protein SSU0613 [Streptococcus suis P1/7]
gi|253755797|ref|YP_003028937.1| hypothetical protein SSUBM407_1211 [Streptococcus suis BM407]
gi|386577642|ref|YP_006074048.1| hypothetical protein [Streptococcus suis GZ1]
gi|386579699|ref|YP_006076104.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|386581647|ref|YP_006078051.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|386587880|ref|YP_006084281.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|403061284|ref|YP_006649500.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
gi|145691309|gb|ABP91814.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|251815762|emb|CAZ51364.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818261|emb|CAZ56069.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251819620|emb|CAR45355.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|292558105|gb|ADE31106.1| hypothetical protein SSGZ1_0647 [Streptococcus suis GZ1]
gi|319757891|gb|ADV69833.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|353733793|gb|AER14803.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|354985041|gb|AER43939.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|402808610|gb|AFR00102.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
Length = 218
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD +G+L G+IT ++ A L + E G +
Sbjct: 102 YKNKVGILPVVD-NGQLYGVITDRDIFAAFLHVSGYGEEGVR 142
>gi|299132348|ref|ZP_07025543.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298592485|gb|EFI52685.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 228
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + L V P V EA +++V I+ V+D+ LVGL+S+ DLL ++
Sbjct: 3 VRDVMT--KHLVSVLPNVHVREAAKMMVGNGISALTVVDERGSLVGLLSEGDLLHRRELN 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAA 200
R S W + L+ K+N +MV D+MT + L D A
Sbjct: 61 TETRR---------SWWLDLFASDRDLAADYVKSNSRMVRDVMTTKVLTASPDDTLGDVA 111
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
R + +RLPV++ +G L+GIITR N+V+A K
Sbjct: 112 RRFEKHHIKRLPVIE-NGHLIGIITRANLVQALANTK 147
>gi|85818625|gb|EAQ39785.1| CBS domain protein [Dokdonia donghaensis MED134]
Length = 154
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+ K L P +V E + L++ +I+G PV+++ +L+G++S+ D + IS
Sbjct: 23 VSDYMSRK--LITFSPDQSVLEVMNSLIKHKISGGPVVNEQNELLGIISEGD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + M K N + + +G M N+ DAA L
Sbjct: 79 ESRYYNMPM-----DNMKVSNHMVSNVDTIDGNM----------------NVFDAANKFL 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
E+K+RR P+V+ +GKLVG I++ +V++AAL++ T
Sbjct: 118 ESKHRRFPIVE-NGKLVGQISQKDVLKAALELNGQT 152
>gi|78355812|ref|YP_387261.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78218217|gb|ABB37566.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 224
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P ++ A +++ E P++D D KLVG++SD D+ A S +D
Sbjct: 16 PEMSMMRAAKLMKEHSFDRLPIVDKDNKLVGIISDRDI---------KEASPSKATTLD- 65
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+E+ LLS+ V D+MT V + +E+AA ++LE + +PVVD DG+
Sbjct: 66 ----VHELYYLLSEIK---VNDIMTRDVVAAKPDDTVENAALVMLERDFSGMPVVDDDGR 118
Query: 220 LVGIITRGNVVRAALQIKHATEMGAQ 245
L GIIT ++ + L I A G Q
Sbjct: 119 LTGIITDKDIFKVLLSITGARHGGVQ 144
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT ++ KP TV+ A +++E+ +G PV+DDD +L G+++D D+ L SI
Sbjct: 78 VNDIMT--RDVVAAKPDDTVENAALVMLERDFSGMPVVDDDGRLTGIITDKDIFKVLLSI 135
Query: 144 SGS 146
+G+
Sbjct: 136 TGA 138
>gi|392412223|ref|YP_006448830.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390625359|gb|AFM26566.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 226
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K + ++ T ++ A+ +++E ++ FPV+++ KLVG+V+D DL
Sbjct: 3 VKDWMTKK--VVTLEVTDSLQHAINLMMEDHVSMFPVLEEG-KLVGIVTDRDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
RA S +D +Q+++ + VG +M+ P+ V +E+AA +L+
Sbjct: 53 --KRASPSDMARLD--------IQQIIYHVSRVEVGAIMSRYPITVPLNWTVEEAAEILM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
K PV+D G++ G+IT+ ++ +A + + + G Q
Sbjct: 103 TNKISGCPVIDEKGEIRGLITKSDLFKALIALSGLSHRGFQ 143
>gi|89897037|ref|YP_520524.1| hypothetical protein DSY4291 [Desulfitobacterium hafniense Y51]
gi|89336485|dbj|BAE86080.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 174
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + + P T + E ++L + I+G PVID L+G+VS+ DLL ++
Sbjct: 28 VQDIMQTN--VITISPNTEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLHKET-- 83
Query: 145 GSGRADNSM-FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R ++ F ++ + + L K ++MT + + + ++E+AA L+
Sbjct: 84 -HPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTHEVITLDKDASIEEAASLM 142
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLP+++ +GK+VGIITR +V++ ++
Sbjct: 143 INHNVKRLPIME-NGKMVGIITRKDVIKVLIE 173
>gi|320162383|ref|YP_004175608.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
gi|319996237|dbj|BAJ65008.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 18/148 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P V EAL + + ++ +PV+D KL+G+V+D DL+ + S ++
Sbjct: 14 ITPDVPVQEALARMRQDKVRRYPVVDKKGKLIGIVTDSDLM-----NASPSEATTL---- 64
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S W E+ LLS+ V +MT P+ V E T +E+AAR++ + K LPV+ D
Sbjct: 65 -SVW----EINYLLSRIT---VERVMTREPITVTEDTTVEEAARIMADNKIGGLPVL-RD 115
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
+LVGIIT ++ + L++ A G +
Sbjct: 116 NRLVGIITETDLFKIFLEMLGARTAGVR 143
>gi|410029632|ref|ZP_11279462.1| hypothetical protein MaAK2_10523 [Marinilabilia sp. AK2]
Length = 152
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T L ++D LE+L +++I+G PV+D D +L+G++S+ D L I
Sbjct: 22 VKDHMST--SLVTFHAEDSIDHVLEVLTKRKISGAPVVDKDGRLIGIISEVD--CLKEII 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
++ FP V D MT + +L DAA+ L
Sbjct: 78 KGKYSNTPKFPGT---------------------VADHMTEDVFTLSPDLSLFDAAQKFL 116
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
E K RR PV+ D +LVG I+ +V+RA ++K T
Sbjct: 117 ELKIRRFPVL-KDDRLVGQISLSDVIRAFPKLKSTT 151
>gi|15643592|ref|NP_228638.1| hypothetical protein TM0829 [Thermotoga maritima MSB8]
gi|418045001|ref|ZP_12683097.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
gi|4981361|gb|AAD35911.1|AE001750_5 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678083|gb|EHA61230.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
Length = 150
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
N++ + + K + V + M PVVV+E L AA L+ ++ LPVVD +LV
Sbjct: 75 ---NQLIRNVVKIKDRPVSEFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLV 131
Query: 222 GIITRGNVVRAA 233
GI+ R +++R
Sbjct: 132 GIVRRIDILRVV 143
>gi|332296074|ref|YP_004437997.1| hypothetical protein Thena_1247 [Thermodesulfobium narugense DSM
14796]
gi|332179177|gb|AEE14866.1| CBS domain containing protein [Thermodesulfobium narugense DSM
14796]
Length = 867
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 34/163 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT+ + V+ P T+V+EA +IL+ +G P++ D ++VG++S D+
Sbjct: 315 VKDVMTSP--VRVLSPETSVEEARKILLRYGHSGVPILKGD-EIVGVLSRKDI------- 364
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A ++ EVQK++S+ + + + +L++A +L++
Sbjct: 365 --DKATQHRLGQI--------EVQKIMSRN------------VITINQDASLDEAQKLMI 402
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA--ALQIKHATEMGAQ 245
E + RLPVV+ KLVG+ITR +++R + IK E+ +
Sbjct: 403 EKEIGRLPVVNEKNKLVGLITRTDILRVWHGINIKKTKELSTK 445
>gi|297617214|ref|YP_003702373.1| signal transduction protein with CBS domains [Syntrophothermus
lipocalidus DSM 12680]
gi|297145051|gb|ADI01808.1| putative signal transduction protein with CBS domains
[Syntrophothermus lipocalidus DSM 12680]
Length = 153
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 12/152 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT +++ VV +V + +E+ IT V+D+D K+ G+V+D D+LA +
Sbjct: 6 DIMT--QDVKVVNTDDSVGGVIRCFLEEGITSAVVVDNDNKVKGIVTDGDILA------A 57
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNG---KMVGDLMTPAPVVVRETTNLEDAARLL 203
R + +V S + + + ++KT+ K V ++MT V V E T++ + ARL+
Sbjct: 58 VRQRRPVVVDVMSYFWAVGDDEDFVAKTDAVKQKKVKEIMTKHVVTVTEDTSIPEIARLM 117
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+E +++PVV + G++VG+I R ++V+A +
Sbjct: 118 VENGIKQIPVVQS-GRIVGLIRRKDIVKAVAE 148
>gi|397733004|ref|ZP_10499729.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
gi|396931137|gb|EJI98321.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
Length = 188
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 31/154 (20%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + VV+ + ++ A +L E PV+DD +LVG+++ D+L RA
Sbjct: 11 QRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RA-- 59
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + K VG++MT V L D +++LL+ R L
Sbjct: 60 --------------------GQASSKTVGEVMTAPAVAAPMYQYLADVSQMLLQQGLRSL 99
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
PVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 100 PVVDIDGRVVGILSRSDVVRLMLKPNEMIAVGAQ 133
>gi|405382811|ref|ZP_11036588.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397320739|gb|EJJ25170.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 160
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 19/154 (12%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MTT +L V P TTV EA +++ +T PV+D D +L+GLVS+ D++ R
Sbjct: 9 MTT--DLVTVSPDTTVAEAARLMLLHHVTAVPVVDADKRLLGLVSEGDVM---------R 57
Query: 149 ADNSMFPEVDSTW-KTFNEVQKLLS------KTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ F + W + E + L + N + V ++M + + E +L + A
Sbjct: 58 HFGAQFQSKRAQWLRMLAEGEALAPEFLAEIRINQQHVREMMHTSIISGDEEASLAELAD 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
L+L+ + +R+P++ +G LVGI++R +VVRA ++
Sbjct: 118 LMLKHQIKRVPIL-RNGVLVGIVSRADVVRAVVE 150
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR---AAL 234
M DL+T +P T + +AARL+L +PVVDAD +L+G+++ G+V+R A
Sbjct: 9 MTTDLVTVSP-----DTTVAEAARLMLLHHVTAVPVVDADKRLLGLVSEGDVMRHFGAQF 63
Query: 235 QIKHA 239
Q K A
Sbjct: 64 QSKRA 68
>gi|78044420|ref|YP_359009.1| CBS/GGDEF domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996535|gb|ABB15434.1| CBS/GGDEF domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 271
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 34/134 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P ++ +A E++ +RI G PV++++ KL+G+++ DL+ +PE
Sbjct: 16 IEPYRSLWDAKELMRSQRIGGLPVVENE-KLIGIITSKDLI--------------FYPE- 59
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
++V D MT PVV+ E L DA + +LE RLPV+D
Sbjct: 60 ------------------NRLVIDAMTEEPVVIEEKAYLFDAYQKMLENNIERLPVIDES 101
Query: 218 GKLVGIITRGNVVR 231
G L GIITR + R
Sbjct: 102 GALTGIITRKVIER 115
>gi|328952455|ref|YP_004369789.1| hypothetical protein Desac_0728 [Desulfobacca acetoxidans DSM
11109]
gi|328452779|gb|AEB08608.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
DSM 11109]
Length = 151
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+V + +L + +I G PV+DDD +LVG+++ DL+ RA P V
Sbjct: 15 VTPQTSVLDLARLLAQHKINGTPVVDDDGRLVGVITQTDLI--------DRAKKFQLPHV 66
Query: 158 DSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + +K L K G V D+MT + + ++++ A ++ L
Sbjct: 67 VTILDAHFYLERPSTFRKNLEKMLGNQVADVMTAPAITITPELSVDEVATIMAHRNAHTL 126
Query: 212 PVVDADGKLVGIITRGNVVRAALQ 235
PV+ DG LVG+I + +++RA Q
Sbjct: 127 PVLQ-DGNLVGVIGKIDIIRALSQ 149
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA--LQIKH 238
D+MT + V T++ D ARLL + K PVVD DG+LVG+IT+ +++ A Q+ H
Sbjct: 6 DIMTKTVITVTPQTSVLDLARLLAQHKINGTPVVDDDGRLVGVITQTDLIDRAKKFQLPH 65
>gi|319778179|ref|YP_004134609.1| cbs domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171898|gb|ADV15435.1| CBS domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 232
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 14/147 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P+ ++ +A +++ +I+G PVI D LVG++S+ DLL + + G+ R
Sbjct: 14 IDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLRREEL-GTQRK-------- 64
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
W F V + NG+ + ++MT + V +L + L+ + +R+P+
Sbjct: 65 RPRWLEFLVSPGRVAEEYVLANGRRIEEVMTDSVVTASPNASLAEVVELMTHHRIKRVPI 124
Query: 214 VDADGKLVGIITRGNVVRAALQIKHAT 240
VD D K+VG+I R +++RA L ++ A+
Sbjct: 125 VDGD-KVVGMIARSDLLRALLDMQPAS 150
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT V + + ++ DAA L+L +K LPV+ DG LVGII+ G+++R
Sbjct: 6 IMTTPVVAIDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLR 55
>gi|170741730|ref|YP_001770385.1| hypothetical protein M446_3570 [Methylobacterium sp. 4-46]
gi|168196004|gb|ACA17951.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
Length = 246
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 16/150 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+ MTT+ + + +++ A +++EKRI+G P++D +LVG+V++ DL+A I G+
Sbjct: 5 EIMTTQ--VTCGRADLSLELAAALMLEKRISGLPILDAAGRLVGIVTEGDLVARREI-GT 61
Query: 147 GRADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
R + W + + ++ G VGD MT V T L+D L
Sbjct: 62 ARPHPA--------WIRYLLSPGRLAAAYARECGHRVGDAMTREVVTASPETPLDDIVGL 113
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ + RR+P+V+ DG+LVGI+TR +++RA
Sbjct: 114 MARRRIRRVPIVE-DGRLVGIVTRADLLRA 142
>gi|294101984|ref|YP_003553842.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
gi|293616964|gb|ADE57118.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
Length = 152
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 20/147 (13%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------ 139
G+ M +L V + +A+ IL ++G PV+ +DW+LVG +S+ D+L
Sbjct: 6 GELM--HRDLTAVMEEDLIQDAVHILYSHNLSGIPVVKEDWELVGYLSETDILQAAIPTY 63
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
L+ ++ S +N VD F + K K+V + MT P V + +L
Sbjct: 64 LEILAQSSFLNNGEIHLVDR----FKNLGK-------KVVREFMTKNPYSVPPSASLMTV 112
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITR 226
A L+L K +RLPVV+ + KL+GII R
Sbjct: 113 ADLMLRKKIKRLPVVEGN-KLIGIINR 138
>gi|14521857|ref|NP_127333.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
gi|13878566|sp|Q9UY49.1|IMDH_PYRAB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|5459077|emb|CAB50563.1| guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP
dehydrogenase) (IMPDH) (IMPD) [Pyrococcus abyssi GE5]
gi|380742493|tpe|CCE71127.1| TPA: inositol-5-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
Length = 485
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 35/138 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD AL ++ + I G PV++++ K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKDVITVPENIEVEEALKIMIENRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVV 230
VVD +G+L+G+IT ++V
Sbjct: 186 VVDKEGRLIGLITMSDLV 203
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT +++ V V+EAL+I++E RI PV+D + +L+GL++ DL+A
Sbjct: 152 VKELMT--KDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLVARKKYK 209
Query: 145 GSGRADNS 152
+ R +N
Sbjct: 210 NAVRDENG 217
>gi|417938413|ref|ZP_12581711.1| CBS domain protein [Streptococcus infantis SK970]
gi|343391503|gb|EGV04078.1| CBS domain protein [Streptococcus infantis SK970]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD +G+L G+IT +V A L+I E G +
Sbjct: 103 KNKIGILPVVD-NGQLYGVITDRDVFSAFLEIAGYGEEGVR 142
>gi|256828518|ref|YP_003157246.1| hypothetical protein Dbac_0707 [Desulfomicrobium baculatum DSM
4028]
gi|256577694|gb|ACU88830.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
DSM 4028]
Length = 221
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D+MT +++ V P T++ A +++ EK I PV+DD K++G++SD D+
Sbjct: 3 IKDWMT--KDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDV------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D +E+ LLS+ V ++MTP+P+ +RET + A ++
Sbjct: 54 --KEASPSKATTLD-----VHELYYLLSEIK---VKNIMTPSPLTIRETDTVVKCAAIMH 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPV++ +LVGI+T+ V L I G Q
Sbjct: 104 DKKISGLPVLNDKDELVGIMTQNEVYSVLLSITGIYHGGVQ 144
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ D MT + V T++ AA+L+ E RRLPVVD GK++G+++ +V A+
Sbjct: 2 IIKDWMTKDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDVKEAS 57
>gi|340618018|ref|YP_004736471.1| hypothetical protein zobellia_2032 [Zobellia galactanivorans]
gi|339732815|emb|CAZ96148.1| CBS domain protein [Zobellia galactanivorans]
Length = 155
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 26/152 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K L KP ++ E +E+ + I+G PV+DD+ LVG++S+ D + IS
Sbjct: 25 VSDYMTKK--LVTFKPDQSILEVMELFTKHNISGGPVMDDNGFLVGIISEAD--CMKQIS 80
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN Q +L K+ V MT + ++ DAA +
Sbjct: 81 ES---------------RYFN--QPILDKS----VEKFMTKEVETIPHDISIFDAASIFD 119
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ RRLPV+ DG LVG I+R ++V AAL++
Sbjct: 120 KHNRRRLPVM-KDGILVGQISRKDIVIAALKL 150
>gi|444913606|ref|ZP_21233756.1| CBS domain protein [Cystobacter fuscus DSM 2262]
gi|444715730|gb|ELW56594.1| CBS domain protein [Cystobacter fuscus DSM 2262]
Length = 290
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 25/181 (13%)
Query: 56 VSALRRSSAVFASGTLTANSA-----APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEI 110
V A +R + G L A A AP D + T E + P T++EA +
Sbjct: 109 VDASKRMVGILTDGDLLAAMAGEHLSAPGDPWELPVDMLMTHEPF-ALGPDATLEEAAGV 167
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 170
L++ + PV+DDD +LVG++S+ DL + + GS R E + EV+
Sbjct: 168 LIDADVRHLPVVDDDERLVGILSERDL--RERLGGSAR-------EWPRAARQALEVR-- 216
Query: 171 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+G+ MTP P+ +R ++ A + + + +PVVD D +L+GI++ +++
Sbjct: 217 --------LGEAMTPDPLALRSGASVAQALEIFTDERVGAIPVVDEDERLLGILSYIDLL 268
Query: 231 R 231
R
Sbjct: 269 R 269
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 30/138 (21%)
Query: 108 LEILVEK--RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
LE L++K + PVI + +LVG+V+ D+L
Sbjct: 28 LEGLLKKFRHVRHLPVIGANSRLVGMVTRMDVL--------------------------- 60
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
E LL + V DL++ V + E +L +AAR + + + LPVVDA ++VGI+T
Sbjct: 61 EEALLLGRERWVRVRDLLSCPVVSISENESLPEAARAMRKAQVHSLPVVDASKRMVGILT 120
Query: 226 RGNVVRAALQIKHATEMG 243
G+++ AA+ +H + G
Sbjct: 121 DGDLL-AAMAGEHLSAPG 137
>gi|240102816|ref|YP_002959125.1| inosine 5'-monophosphate dehydrogenase [Thermococcus gammatolerans
EJ3]
gi|239910370|gb|ACS33261.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
(IMPD) (guaB) [Thermococcus gammatolerans EJ3]
Length = 485
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 35/139 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD A+ ++ I G PV++D K+VG++S D+
Sbjct: 101 EDVISISPDETVDYAIFLMERNDIDGLPVVED-GKVVGVISKKDI--------------- 144
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ GK+V D+MT P+ V E E+A L+ E + RLP
Sbjct: 145 -------------------AVKQGKLVRDIMTGEPITVPENVTAEEALTLMFEHRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVVR 231
VV+++GKLVGIIT ++ +
Sbjct: 186 VVNSEGKLVGIITMSDLAK 204
>gi|295106203|emb|CBL03746.1| CBS-domain-containing membrane protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 161
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL--- 140
T+GD M + +++ + + E + + E +G VID+D +VG +SD D++
Sbjct: 4 TIGDIM--ERDVYTCRYDQNLGEIVALFNELGTSGLAVIDEDRHVVGFISDGDIMKAVAA 61
Query: 141 ---DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
SI G G A+ ++ ++F E + L N V +L + V ++
Sbjct: 62 QKTRSIFGGGYANMVLYDN-----ESFEEKARALKHRN---VMELAVQKVLCVTADQSIG 113
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+ A +L + K++++PV+D DG+LVG++ R + R + E
Sbjct: 114 EIADVLAKKKFKKVPVIDEDGRLVGVVRRATITRYLFDVLFGEE 157
>gi|330468206|ref|YP_004405949.1| cbs domain-containing membrane protein [Verrucosispora maris
AB-18-032]
gi|328811177|gb|AEB45349.1| cbs domain containing membrane protein [Verrucosispora maris
AB-18-032]
Length = 233
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ V T + +++L E+R++ PV+DD ++G+VS+ DLL
Sbjct: 4 WQVEDVMT--RDVATVVEQTPYRQIVDLLAERRVSAVPVVDDFGHVLGVVSEADLLH--K 59
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM--VGDLMTPAPVVVRETTNLEDAA 200
+ G + F ++ S+ G+ +LMT V T+L AA
Sbjct: 60 VEWMGEPHER---------RVFEGARQRRSRRKGEADNARELMTTPAVTTSPHTSLVAAA 110
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ----IKH 238
+L+ + +RLPVVD G++VGI+TR +++R L+ I+H
Sbjct: 111 KLMDREQVKRLPVVDDMGRVVGIVTRSDLLRVHLRPDADIRH 152
>gi|300728337|ref|ZP_07061702.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
gi|299774402|gb|EFI71029.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
Length = 494
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 33/131 (25%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +AL+++ E I G PV+D+D LVG+V++ DL R + M ++D
Sbjct: 110 TVKDALDMMAEYHIGGIPVVDEDNHLVGIVTNRDL----------RFERRMDRKID---- 155
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
D+MT +V + T+L AA++L E K +LPVVDA+ LV
Sbjct: 156 ------------------DVMTKENLVTTHQQTDLLAAAQILQENKIEKLPVVDAENHLV 197
Query: 222 GIITRGNVVRA 232
G+IT ++ +A
Sbjct: 198 GLITYKDITKA 208
>gi|448489161|ref|ZP_21607535.1| peptidase M50 [Halorubrum californiensis DSM 19288]
gi|445695106|gb|ELZ47217.1| peptidase M50 [Halorubrum californiensis DSM 19288]
Length = 394
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +E+LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTRQEDLHTVTEDTSVADLMSRMFEERHTGYPVLDGD-QLVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYTVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVDADG+LVG+I+R +++ A
Sbjct: 339 QEHGVGRLPVVDADGELVGLISRSDLMTA 367
>gi|442804457|ref|YP_007372606.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740307|gb|AGC67996.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 213
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + + P T+ +A EI+ + I PV+ D KLVG+VS+ D+
Sbjct: 3 VKDKMTTN--IITISPDATIPDAHEIMTKNNIRRLPVVKD-GKLVGVVSNLDIT------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
RA S +T + NE+ +L+KT + +MT P+ + LE+AA L+
Sbjct: 54 ---RATPS-----PATSLSINELTYILAKTK---ISKVMTKNPITISPNALLEEAAILMR 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ LPVVD+ GKLVGIIT ++ + +++ E G +
Sbjct: 103 DNGVSFLPVVDS-GKLVGIITESDIFDSFIELLGFREKGTR 142
>gi|421735499|ref|ZP_16174422.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
gi|407297212|gb|EKF16671.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
Length = 683
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAVTPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 MKS 582
>gi|15644106|ref|NP_229155.1| inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
maritima MSB8]
gi|148270558|ref|YP_001245018.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga petrophila RKU-1]
gi|170289264|ref|YP_001739502.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. RQ2]
gi|418045411|ref|ZP_12683506.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga maritima MSB8]
gi|4981914|gb|AAD36425.1|AE001789_10 inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
maritima MSB8]
gi|147736102|gb|ABQ47442.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga petrophila RKU-1]
gi|170176767|gb|ACB09819.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. RQ2]
gi|351676296|gb|EHA59449.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga maritima MSB8]
Length = 321
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 29/133 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D+
Sbjct: 29 VTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDS------ 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V MT V ++ET L+DA + + Y R PVVD +
Sbjct: 81 ---------------------VEKRMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDE 119
Query: 218 GKLVGIITRGNVV 230
GKLVGI+T+ +++
Sbjct: 120 GKLVGIVTKHDII 132
>gi|392957843|ref|ZP_10323363.1| CBS domain containing membrane protein [Bacillus macauensis
ZFHKF-1]
gi|391876192|gb|EIT84792.1| CBS domain containing membrane protein [Bacillus macauensis
ZFHKF-1]
Length = 160
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM + +++V T+ E +E+L + + G PV+D + KL+ ++SD D+L ++
Sbjct: 3 VQDFMIS--DVYVAHLDQTLSEVMEMLARQNVGGMPVVDHEGKLLSMISDGDILR--ALK 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP--APVVVRETTNLEDAARL 202
R F V ++ E ++++ T + +L+ V +E A L
Sbjct: 59 PKSRHMYDFFSFV--FYEEQAEFEEVIRHTGATPLRELLPKRIKTYTVSPQDEMEHALGL 116
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVR 231
L + +++LPV+D +VGII+RG++++
Sbjct: 117 LAKHHFKKLPVIDEQQHVVGIISRGDIIK 145
>gi|441146167|ref|ZP_20964057.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620746|gb|ELQ83771.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 227
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
G++TV D MT + V E + ++ + +++ PV++ + +++G+VS+ DLL
Sbjct: 13 GLHTVSDVMT--HTVVAVGRNAPFKEIVRMMEQWKVSALPVLEGEGRVIGVVSEADLLPK 70
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ DS F + ++L L+K G+LM+ + V L
Sbjct: 71 EEFR-------------DSDPSRFEQRRRLEDLAKAGALTAGELMSAPAICVHADAALPQ 117
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
AAR++ +RLPV DA G L G+I+R ++++ L+
Sbjct: 118 AARIMAVRHVKRLPVTDAQGLLQGVISRSDLLKVFLR 154
>gi|223932398|ref|ZP_03624400.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|302023619|ref|ZP_07248830.1| hypothetical protein Ssui0_03021 [Streptococcus suis 05HAS68]
gi|330832631|ref|YP_004401456.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|386583892|ref|YP_006080295.1| putative signal transduction protein [Streptococcus suis D9]
gi|389856795|ref|YP_006359038.1| putative signal transduction protein [Streptococcus suis ST1]
gi|417092660|ref|ZP_11957276.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|223898852|gb|EEF65211.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|329306854|gb|AEB81270.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|353532339|gb|EHC02011.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|353736038|gb|AER17047.1| putative signal transduction protein with CBS domains
[Streptococcus suis D9]
gi|353740513|gb|AER21520.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST1]
Length = 218
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TT+ A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTIAHAADIMREQDLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD +G+L G+IT ++ A L + E G +
Sbjct: 102 YKNKVGILPVVD-NGQLYGVITDRDIFAAFLHVSGYGEEGVR 142
>gi|365899445|ref|ZP_09437351.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419812|emb|CCE09893.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 249
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA ++++ I PV+D KLVG+V+D D + I G+ R
Sbjct: 14 VTPGTPIVEAAKVMLRNHIGALPVVDTGGKLVGIVTDGDFIRRAEI-GTARKRGRWL--- 69
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ +++G+ V ++MTP PV V E L + L+ +RLPVV D
Sbjct: 70 -GLLVGRGRINADFIRSHGRAVCEIMTPDPVTVSENATLPEIVGLMERKHVKRLPVVSGD 128
Query: 218 GKLVGIITRGNVVRAALQIKHATEM 242
+LVGI++ + V+A + ATE+
Sbjct: 129 -RLVGIVSYRDFVQAITDL--ATEL 150
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+M+ + + V T + +AA+++L LPVVD GKLVGI+T G+ +R A
Sbjct: 6 IMSRSVITVTPGTPIVEAAKVMLRNHIGALPVVDTGGKLVGIVTDGDFIRRA 57
>gi|389689835|ref|ZP_10178948.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388589965|gb|EIM30252.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 239
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 14/139 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P+ TV EA +++ RI+G PV D LVG++S+ DLL + G+ R
Sbjct: 14 VEPSATVAEAARLMLADRISGLPVTTRDGTLVGMISEGDLLRRGEL-GTDRK-------- 64
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
S+W F + +T+G+ V +M+ PV R LE+ + +RLPV
Sbjct: 65 RSSWLEFLVGPGTLADEYVRTHGRKVEQVMSGDPVTTRRDAPLEEVVTAMGRHGIKRLPV 124
Query: 214 VDADGKLVGIITRGNVVRA 232
+++ K+VGI+ R +V+RA
Sbjct: 125 LESR-KVVGIVARSDVLRA 142
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+M + V + + +AARL+L + LPV DG LVG+I+ G+++R
Sbjct: 2 IVEDVMATPVISVEPSATVAEAARLMLADRISGLPVTTRDGTLVGMISEGDLLR 55
>gi|315656165|ref|ZP_07909056.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|315493167|gb|EFU82767.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 212
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A+E++ IT PV+ D KL G+VS DL N P D+T
Sbjct: 19 TVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRALPS-DATSL 63
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
+F EV LLSK + +M P + LE+AA L+ +TK LPV+D +GK+VG
Sbjct: 64 SFGEVAYLLSKLK---IYKIMRKNPPTIVPDAMLEEAAILMRDTKVEILPVLD-EGKVVG 119
Query: 223 IITRGNVVRAALQIKHATEMGAQ 245
+IT +V+ A + I A E G +
Sbjct: 120 VITESDVLDAFIDINGAREPGTR 142
>gi|297529034|ref|YP_003670309.1| hypothetical protein GC56T3_0685 [Geobacillus sp. C56-T3]
gi|297252286|gb|ADI25732.1| CBS domain containing membrane protein [Geobacillus sp. C56-T3]
Length = 214
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 22/148 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ T T+ EAL++L RI PV+D + +LVGLV+ DL A S+F +
Sbjct: 14 LRATNTIAEALQLLRHHRIRHLPVVDGEGRLVGLVTSQDL---------REASPSIF-RL 63
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W+ K VGD+M +V +E+ A L E + LP+V+
Sbjct: 64 HEQWEDLE-----------KPVGDVMKTDLIVGHPLDFVEEVAALFYEHRIGCLPIVN-H 111
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
GKLVGIIT+ +++R +++ + G+Q
Sbjct: 112 GKLVGIITQTDLLRTFIELTGVHQPGSQ 139
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 178 MVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
M+ + + APV+ +R T + +A +LL + R LPVVD +G+LVG++T ++ A+
Sbjct: 1 MLVEQVMKAPVITLRATNTIAEALQLLRHHRIRHLPVVDGEGRLVGLVTSQDLREAS 57
>gi|116753803|ref|YP_842921.1| signal transduction protein [Methanosaeta thermophila PT]
gi|116665254|gb|ABK14281.1| putative signal transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 158
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT-- 163
EA +L E RI+G PV+D D +LVG++S+ DLL L +S P ++
Sbjct: 22 EAARLLRENRISGMPVLDGD-ELVGVISESDLLRL--LSTEDDRGGLWLPSPFEIFEIPV 78
Query: 164 -----FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +++ L + V D+M+ P+ V ++E+AA ++ + + RLPVV+
Sbjct: 79 RDVIRWERMKRSLDEITKMRVADVMSRKPITVSPDASIEEAAAIMTKHRINRLPVVEG-S 137
Query: 219 KLVGIITRGNVV 230
+LVGI+TRG+++
Sbjct: 138 RLVGIVTRGDII 149
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+M PV + + + +AARLL E + +PV+D D +LVG+I+ +++R
Sbjct: 2 LVKDIMNRNPVSCQASDPIAEAARLLRENRISGMPVLDGD-ELVGVISESDLLR 54
>gi|336121852|ref|YP_004576627.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856373|gb|AEH06849.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 278
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 31/147 (21%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT E +K + E +E+ +EK + G PV+D D+KL+ +++ D++
Sbjct: 84 VKEIMTN--EAVCIKENALLKEVIELFIEKNVGGVPVVDKDYKLISTITERDIIRF---- 137
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ VD + K D MT PVV L+D AR +L
Sbjct: 138 --------LKDNVDKSEKVI----------------DYMTEKPVVATSGERLKDVARTML 173
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVR 231
+RRLPV+ D +LVG+IT + ++
Sbjct: 174 RNGFRRLPVISED-RLVGMITSTDFIK 199
>gi|225011281|ref|ZP_03701738.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-3C]
gi|225004591|gb|EEG42556.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-3C]
Length = 156
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 26/152 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTT L PT ++ E +E + I+G PV++D +LVG+VS+ D + IS
Sbjct: 23 VSDYMTT--SLITFSPTQSILEVMECFAKYPISGGPVLNDKKELVGIVSEAD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S R N P +D K V M+ + + ++ DAA +
Sbjct: 79 ES-RYFN--LPILD------------------KSVASFMSKEVETIDASASIFDAATIFH 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
RRLPV+ DGKLVG I+R ++V AAL++
Sbjct: 118 SNSRRRLPVLK-DGKLVGQISRKDIVIAALKL 148
>gi|408828377|ref|ZP_11213267.1| hypothetical protein SsomD4_14410 [Streptomyces somaliensis DSM
40738]
Length = 218
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 26/152 (17%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ MT E+ P T+ +E +L RI G PV+D D K+VG+VS DL
Sbjct: 6 TVGEVMTG--EVVQAHPDTSAEEVSRLLSAHRIGGLPVVDGDDKVVGVVSRTDL------ 57
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ G LMT V V + DAAR++
Sbjct: 58 ------------------AGRRAARGRAGPGEAATAGHLMTSPAVTVHPEQRVADAARVM 99
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ RLPVVD + +L+GI TR +++R L+
Sbjct: 100 ERRRVDRLPVVDEEDRLIGIATRRDLLRVFLR 131
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 174 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
T + VG++MT V T+ E+ +RLL + LPVVD D K+VG+++R
Sbjct: 2 TRNRTVGEVMTGEVVQAHPDTSAEEVSRLLSAHRIGGLPVVDGDDKVVGVVSR 54
>gi|217977212|ref|YP_002361359.1| hypothetical protein Msil_1028 [Methylocella silvestris BL2]
gi|217502588|gb|ACK49997.1| CBS domain containing membrane protein [Methylocella silvestris
BL2]
Length = 226
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 14/139 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + A+ +LV+ ++ PV+D D ++VG++S+ DLL + D + P
Sbjct: 14 VGPDDEIAAAVRLLVDHDVSALPVVDADGRVVGVLSEADLLFREE-------DGTAQPH- 65
Query: 158 DSTW----KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
S W + + + +K +G+ V ++M+ + +L D A LL + + +R+P+
Sbjct: 66 -SWWVEALTPASILAQQFAKEHGRKVSEVMSSEVISAPADASLADIAHLLEKRRIKRVPI 124
Query: 214 VDADGKLVGIITRGNVVRA 232
+ DGKLVGI++R N+++A
Sbjct: 125 I-TDGKLVGIVSRSNIMQA 142
>gi|320353215|ref|YP_004194554.1| hypothetical protein Despr_1091 [Desulfobulbus propionicus DSM
2032]
gi|320121717|gb|ADW17263.1| CBS domain containing membrane protein [Desulfobulbus propionicus
DSM 2032]
Length = 151
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E+ V T+V E +L+ +I+G PV+D+ K++G+V++ DL+ +
Sbjct: 6 DIMT--REVITVNARTSVRELAALLLSHKISGAPVVDEAGKVIGVVTESDLIFQNK---- 59
Query: 147 GRADNSMFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
P + F + +++ L K G VGD+ + + V T+LE+ A
Sbjct: 60 ----KVHLPTAFAILDAFVFLEPPDRMKEELRKMAGTRVGDICSTPLISVGPETDLEELA 115
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
L+ E K LPV+ A+G LVG+I + +++R Q
Sbjct: 116 TLMAEKKMHTLPVM-AEGTLVGVIGKSDIIRTIAQ 149
>gi|322387419|ref|ZP_08061029.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|417936147|ref|ZP_12579464.1| CBS domain protein [Streptococcus infantis X]
gi|419842595|ref|ZP_14365932.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|321141948|gb|EFX37443.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|343403056|gb|EGV15561.1| CBS domain protein [Streptococcus infantis X]
gi|385703540|gb|EIG40653.1| CBS domain protein [Streptococcus infantis ATCC 700779]
Length = 218
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD +G+L G+IT +V A L+I E G
Sbjct: 103 KNKIGILPVVD-NGQLYGVITDRDVFSAFLEIAGYGEEG 140
>gi|117927799|ref|YP_872350.1| signal-transduction protein [Acidothermus cellulolyticus 11B]
gi|117648262|gb|ABK52364.1| putative signal-transduction protein with CBS domains [Acidothermus
cellulolyticus 11B]
Length = 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 35/139 (25%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
K ++ V T V + +LV+ RI+ PV+D +VGLVS++DL+
Sbjct: 8 KAPVYTVDVDTPVADIAHLLVQHRISAVPVVDASGAVVGLVSEHDLI------------- 54
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
S+T GK+ D+M+ + V E T +ED LLL+ + RR+
Sbjct: 55 --------------------SRT-GKVAADIMSTGVISVTEDTEVEDVRHLLLDRRIRRV 93
Query: 212 PVVDADGKLVGIITRGNVV 230
PVV G+L+GI++R ++V
Sbjct: 94 PVVSG-GQLIGIVSRADLV 111
>gi|291279250|ref|YP_003496085.1| hypothetical protein DEFDS_0853 [Deferribacter desulfuricans SSM1]
gi|290753952|dbj|BAI80329.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 141
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSI 143
V D+MT + + V + + + L EK I+G PV+D + +VG+ S+ DLLA L I
Sbjct: 3 VKDYMT--KNVIVAYENENIRDVVLRLREKNISGVPVLDGNNNVVGVFSESDLLAQLPDI 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
P +D T V+ ++ K P+ + E +L+ AA L
Sbjct: 61 LHEAEQ----IPLIDVKELTDAPVKTIMGK------------PPITIHENDSLKKAAELF 104
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
L RLPV++ +GKLVGII+ G+V++A ++
Sbjct: 105 LTKYIHRLPVLNDEGKLVGIISLGDVLKAFIE 136
>gi|448417455|ref|ZP_21579391.1| zn-dependent protease [Halosarcina pallida JCM 14848]
gi|445677943|gb|ELZ30439.1| zn-dependent protease [Halosarcina pallida JCM 14848]
Length = 392
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + L VV T+V E L+ + +R TG+PV+ + LVG+V+ D
Sbjct: 249 TVRDIMTERNRLDVVDVRTSVAELLDRMFRERHTGYPVMKNG-HLVGMVTLNDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ NEV++ + +VGD+M+ V N DA ++
Sbjct: 302 ------------------RSVNEVER-----DAYLVGDVMSGELTTVLPDANAMDAITVM 338
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVD G+LVG+I+R ++V A
Sbjct: 339 QENGVGRLPVVDESGELVGLISRSDLVTA 367
>gi|403253702|ref|ZP_10920003.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. EMP]
gi|402811236|gb|EJX25724.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. EMP]
Length = 321
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 29/133 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D
Sbjct: 29 VTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDR------ 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V MT V ++ET L+DA + + Y R PVVD +
Sbjct: 81 ---------------------VEKRMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDE 119
Query: 218 GKLVGIITRGNVV 230
GKLVGI+T+ +++
Sbjct: 120 GKLVGIVTKHDII 132
>gi|317482260|ref|ZP_07941281.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316916276|gb|EFV37677.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 683
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVDADG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDADGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|297560081|ref|YP_003679055.1| hypothetical protein Ndas_1108 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844529|gb|ADH66549.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 221
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MTT + + E + + ++ PV+D +++G+VS DLL
Sbjct: 4 TVGDLMTTS--VLAARDDAGYKELAAFMRDHHVSAVPVVDGGHRVLGVVSTADLLL---- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
AD PE T + F E + K+ G +LMT V V T +AA L+
Sbjct: 58 ---KLADPD--PEEGYTGEPFRERLARI-KSTGTTARELMTSPAVTVTAATAPREAAGLM 111
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVV 230
+RRLPVVD DG+LVG++ R +++
Sbjct: 112 RRHGFRRLPVVDGDGRLVGLVGRSDLL 138
>gi|289767041|ref|ZP_06526419.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289697240|gb|EFD64669.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ T E +L+E IT PV+D++ + VG+VS+ DLL + G G D S
Sbjct: 12 VQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLL--QKMWG-GEPDGSAE--- 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ W + K + LMT P+ E+ ++ DA R++ + +RL VVD D
Sbjct: 66 HAEWSRASA-----GKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGD 120
Query: 218 GKLVGIITRGNVVRAALQIKHA 239
G+L G+++R +++R L+ A
Sbjct: 121 GRLAGVVSRSDLLRVFLRTDRA 142
>gi|258404842|ref|YP_003197584.1| hypothetical protein Dret_0714 [Desulfohalobium retbaense DSM 5692]
gi|257797069|gb|ACV68006.1| CBS domain containing protein [Desulfohalobium retbaense DSM 5692]
Length = 227
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MTTK +H V T+ EA + L + I PV+D +L+G+V+D D+
Sbjct: 3 VENWMTTK--VHTVAADATLMEASKTLKDYAIRRLPVVDSHGRLLGIVTDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D +E+ LLS + + D+MTP+PV VR + AA L+
Sbjct: 54 --KEASPSRATTLD-----IHELYYLLSAIS---LQDIMTPSPVTVRARDTVGRAAILMR 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
LPVVD D +VGIIT ++ I A + G Q
Sbjct: 104 RHTIEGLPVVDDDNTVVGIITESDIFDVLTTITGARQPGIQ 144
>gi|152991023|ref|YP_001356745.1| inosine 5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
gi|151422884|dbj|BAF70388.1| inosine-5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
Length = 481
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+ EA +I+ E RI+G PV+D+D L+G++++ DL
Sbjct: 99 IHPDATIGEAEKIMSEYRISGVPVVDEDMHLLGILTNRDL-------------------- 138
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
K K V ++MT P+V + LE+AA + E K +LP++DA
Sbjct: 139 ------------RFEKDFSKKVSEVMTKMPLVTAKPGITLEEAAEKMNEHKIEKLPIIDA 186
Query: 217 DGKLVGIIT 225
+G+L G++T
Sbjct: 187 EGRLKGLVT 195
>gi|258515971|ref|YP_003192193.1| hypothetical protein Dtox_2805 [Desulfotomaculum acetoxidans DSM
771]
gi|257779676|gb|ACV63570.1| CBS domain-containing membrane protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 155
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 22/161 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL----- 138
TV D MT +E+ V P V++ +L++ I+G PVID+ K+VG++S+ DL+
Sbjct: 5 TVKDIMT--KEVIAVGPDDNVEKVARLLLDHNISGLPVIDEKGKVVGIISEGDLIIQEKE 62
Query: 139 ----ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
A+ ++ G +F E + + E++K+++ V DLMT V
Sbjct: 63 IKAPAMTTLLGG-----VIFLENPNRF--LKELKKIIAVE----VKDLMTRKVYSVGPEA 111
Query: 195 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ ++ E + R+PV++ +GKL+GIITR +++ A +
Sbjct: 112 TIAKVTGIMSEKRINRIPVLNDEGKLLGIITRKDIIENAFK 152
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
V D+MT + V N+E ARLLL+ LPV+D GK+VGII+ G+++ +IK
Sbjct: 6 VKDIMTKEVIAVGPDDNVEKVARLLLDHNISGLPVIDEKGKVVGIISEGDLIIQEKEIK 64
>gi|434404853|ref|YP_007147738.1| chloride channel protein EriC [Cylindrospermum stagnale PCC 7417]
gi|428259108|gb|AFZ25058.1| chloride channel protein EriC [Cylindrospermum stagnale PCC 7417]
Length = 892
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 24/131 (18%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-DSISGSGRADNSMFPEVDSTW 161
+DE ++ GFPV++++ KLVG+V+ DL + D + +G D +
Sbjct: 469 NLDEVIQAFARSHHRGFPVVEEN-KLVGIVTQSDLQKMRDGLRPAG-GDRQL-------- 518
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
N + + ++MTP P+ V NL LL + RLPV++A KL+
Sbjct: 519 ------------ANDRHLKEIMTPQPITVTPQHNLSHVLYLLDRYQISRLPVMEAQ-KLI 565
Query: 222 GIITRGNVVRA 232
GIITRG+++RA
Sbjct: 566 GIITRGDIIRA 576
>gi|406926052|gb|EKD62378.1| hypothetical protein ACD_52C00201G0002 [uncultured bacterium]
Length = 154
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK--- 162
+ L +L++ +I+G PV++ +LVG++S+ DLL +FP + ++
Sbjct: 22 KVLRVLIKNKISGVPVVNSKKRLVGVISEKDLLI------------HLFPSIKEFYRDID 69
Query: 163 ---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ + ++ K N LMT V ++ A +LL RRLPVV GK
Sbjct: 70 YYLSLDVIETEAKKINRLSASQLMTKKVYTVAPEDHVLKACSMLLIHNVRRLPVVGEGGK 129
Query: 220 LVGIITRGNVVRAALQIKHATEMGAQ 245
LVGI+T ++ R LQ TE G +
Sbjct: 130 LVGIVTTNDLYRKFLQ--KYTEQGLK 153
>gi|138896350|ref|YP_001126803.1| acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|196249976|ref|ZP_03148671.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
gi|134267863|gb|ABO68058.1| Acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|196210490|gb|EDY05254.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
Length = 214
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 22/148 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ T T+ EAL++L RI PVID++ L+GLV+D DL D S P +
Sbjct: 14 LRATNTIAEALQLLRHHRIRHLPVIDEEGHLIGLVTDRDL-----------RDAS--PSI 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++QK +S M D++ P+ +E+ A L E + LP+V+
Sbjct: 61 FHLHQHLEDLQKPVSTI---MKTDIIVGHPL-----DFVEEVAALFYEHRIGCLPIVNG- 111
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
GKLVGIIT +++ +Q+ A + G+Q
Sbjct: 112 GKLVGIITETDLLHTLIQLTGAHQPGSQ 139
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+V +M + + +R T + +A +LL + R LPV+D +G L+G++T ++ A+ I
Sbjct: 2 IVEQVMKTSVITLRATNTIAEALQLLRHHRIRHLPVIDEEGHLIGLVTDRDLRDASPSIF 61
Query: 238 HATE 241
H +
Sbjct: 62 HLHQ 65
>gi|419847222|ref|ZP_14370405.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|419855291|ref|ZP_14378051.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
gi|386411373|gb|EIJ26106.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|386415756|gb|EIJ30278.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
Length = 683
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVDADG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDADGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|260060968|ref|YP_003194048.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
gi|88785100|gb|EAR16269.1| CBS domain protein [Robiginitalea biformata HTCC2501]
Length = 172
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 41/191 (21%)
Query: 61 RSSAVFASGTLTANSAA-----------PSSGVYT----VGDFMTTKEELHVVKPTTTVD 105
+ + +F + NS A PS Y V D+MT L +P ++
Sbjct: 2 KENTIFKNNLTKYNSMAIKSFQGRRAKDPSKKEYDAPILVSDYMT--RNLVTFRPDQSIL 59
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E +E RI+G PV+DD+ LVG+VS+ D + IS S + FN
Sbjct: 60 EVMEAFTRHRISGGPVLDDNGFLVGIVSEAD--CMKQISES---------------RYFN 102
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
Q +L K+ V MT + ++ DAA + + RRLPV+ DG L+G I+
Sbjct: 103 --QPILDKS----VERFMTKEVETIPHDMSIFDAAGVFHKNNRRRLPVM-KDGLLIGQIS 155
Query: 226 RGNVVRAALQI 236
R ++V AAL++
Sbjct: 156 RKDIVVAALKL 166
>gi|374703637|ref|ZP_09710507.1| hypothetical protein PseS9_09665 [Pseudomonas sp. S9]
Length = 141
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 28/161 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTT L + T + A+ L+E RI G PV+D +LVGL+S+ D L ++S
Sbjct: 7 VRDYMTT--HLVTFRAETDLFTAINRLLEHRIAGAPVVDSQGRLVGLISEGDCLRA-TLS 63
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G+ ++ G VGD M+ + T++ + + L
Sbjct: 64 GA------------------------YYESIGGTVGDYMSRNIETITPETSVIEVSERFL 99
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K R+PV+ ADG+LVG I+R +V+RAA + + +Q
Sbjct: 100 QGKLGRMPVI-ADGRLVGQISRSDVLRAAKEFAQHEQGRSQ 139
>gi|424828149|ref|ZP_18252890.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
gi|365979632|gb|EHN15685.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
Length = 138
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 34/157 (21%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + V +V++A ++ E + P+ +++ K+VG+++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAGLMSEYNVGSLPICENN-KVVGVITDRDI-ALRSVA 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R DN++ VGD+MT PVV + ++ DAAR++
Sbjct: 59 K--REDNNI------------------------KVGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
E + RRLPV D + +VGI++ G++ A++ KH E
Sbjct: 93 ERQIRRLPVED-NQNIVGIVSLGDI---AIEPKHENE 125
>gi|440699101|ref|ZP_20881406.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278407|gb|ELP66445.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 236
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TVGD MT +E+ T + + +L RI+G PV+D D K++G+VS DL+
Sbjct: 3 IHTVGDVMT--DEVVQAHRETPFKDVVRLLDAHRISGLPVVDHDDKVIGVVSGTDLVRGQ 60
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ + SG + + L+ T G++ + TPA + V + DAAR
Sbjct: 61 A-ARSGGRRDRRYRLPRLRRPGRRAAPGALATTAGEL---MSTPA-ITVHPEQPVPDAAR 115
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++ RLPVVD + +L+GI TR +++R L+
Sbjct: 116 VMERHGIERLPVVDEEDRLIGIATRRDLLRVFLR 149
>gi|352094424|ref|ZP_08955595.1| putative signal transduction protein with CBS domains
[Synechococcus sp. WH 8016]
gi|351680764|gb|EHA63896.1| putative signal transduction protein with CBS domains
[Synechococcus sp. WH 8016]
Length = 156
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 12/140 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSM 153
V P T + +A+ +L + I+G PV+D L+G +++ DL+ +S +G D+ +
Sbjct: 18 VTPETALKDAVSLLSDHHISGLPVVDQSGVLIGELTEQDLMVRESGVDAGPYVMLLDSVI 77
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVG-DLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ + W +V ++L T ++G DL + A E+ L AA LL E +RL
Sbjct: 78 YLKNPLNWD--KQVHQVLGTTVSDLMGRDLHSCA-----ESLPLPKAASLLHERSTQRLI 130
Query: 213 VVDADGKLVGIITRGNVVRA 232
VVD + + VG++TRG++VRA
Sbjct: 131 VVDDNKRPVGVLTRGDIVRA 150
>gi|223478496|ref|YP_002583173.1| inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
gi|214033722|gb|EEB74548.1| Inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
Length = 485
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 35/139 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P T+D AL ++ + I G PV++D K+VG++S D+ +
Sbjct: 101 EDVISISPDETIDYALFLMEKNDIDGLPVVED-GKVVGVISKKDI--------------A 145
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ P GK+V ++MT P+ V E+ E+A L+ E + RLP
Sbjct: 146 VKP--------------------GKLVREVMTGEPITVPESVTAEEALNLMFEHRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVVR 231
VV+++GKLVGIIT ++ +
Sbjct: 186 VVNSEGKLVGIITMSDLAK 204
>gi|148239502|ref|YP_001224889.1| hypothetical protein SynWH7803_1166 [Synechococcus sp. WH 7803]
gi|147848041|emb|CAK23592.1| CBS domain containing protein [Synechococcus sp. WH 7803]
Length = 156
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ M+ + V P T + +A+ +L + I+G PV+ DD LVG +++ +L+ +S
Sbjct: 6 TVGEVMSAP--VLTVTPETPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLMVRESG 63
Query: 144 SGSGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G V DLM+ + L A
Sbjct: 64 VDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GNTVADLMSRDSHSCAHSLPLPKA 117
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A +L E +RL V+D + + VG++TRG+VVRA
Sbjct: 118 ASMLHEKGTQRLIVIDDERRPVGMLTRGDVVRA 150
>gi|448509403|ref|ZP_21615700.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|448525289|ref|ZP_21619605.1| peptidase M50 [Halorubrum distributum JCM 10118]
gi|445696652|gb|ELZ48736.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|445699831|gb|ELZ51850.1| peptidase M50 [Halorubrum distributum JCM 10118]
Length = 394
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +++LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVDADG+LVG+I+R +++ A
Sbjct: 339 QEHGVGRLPVVDADGELVGLISRSDLMTA 367
>gi|18976657|ref|NP_578014.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|397650783|ref|YP_006491364.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|1170554|sp|P42851.1|IMDH_PYRFU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|595287|gb|AAC44532.1| IMP dehydrogenase [Pyrococcus furiosus]
gi|18892229|gb|AAL80409.1| inosine-5'-monophosphate dehydrogenase (imp dehydrogenase)
[Pyrococcus furiosus DSM 3638]
gi|393188374|gb|AFN03072.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 485
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 35/138 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P T+D AL ++ + I G PV+++D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G+ V +LMT + V E+ ++E+A ++++E + RLP
Sbjct: 149 -----------------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVV 230
VV+ DGKLVG+IT ++V
Sbjct: 186 VVNEDGKLVGLITMSDLV 203
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G TV + MT E+ V + V+EAL+I++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREG-RTVKELMT--REVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 129 VGLVSDYDLLA 139
VGL++ DL+A
Sbjct: 194 VGLITMSDLVA 204
>gi|269218898|ref|ZP_06162752.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
848 str. F0332]
gi|269212009|gb|EEZ78349.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
848 str. F0332]
Length = 500
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 32/136 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+ E + + RI+G PV+D D KL+G++++ DL PE
Sbjct: 103 IGPEATIAELDALCAKYRISGLPVVDGDDKLLGIITNRDL--------------RFIPES 148
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV--RETTNLEDAARLLLETKYRRLPVVD 215
+ +T E MTP P+V R+ E+AARLL + K +LP++D
Sbjct: 149 EFAVRTVRET---------------MTPMPLVTAGRDVPQ-EEAARLLAQHKIEKLPLID 192
Query: 216 ADGKLVGIITRGNVVR 231
+G+L G+IT + V+
Sbjct: 193 GEGRLTGLITVKDFVK 208
>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
15579]
gi|187774141|gb|EDU37943.1| CBS domain protein [Clostridium sporogenes ATCC 15579]
Length = 144
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 34/160 (21%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ V D MT + + V +V++A ++ E + P+ +++ K+VG+++D D+ AL
Sbjct: 6 IMKVMDVMT--QNVATVNRNDSVEKAARLMSEHNVGSIPICENN-KVVGVITDRDI-ALR 61
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
S++ +DN++ VGD+MT PVV + ++ DAAR
Sbjct: 62 SVANG--SDNNI------------------------KVGDIMTSNPVVANKDMDIHDAAR 95
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
++ E + RRLPV D + +VGI++ G++ A++ +H E
Sbjct: 96 IMSERQIRRLPVED-NKNIVGIVSLGDI---AIEPQHENE 131
>gi|453051719|gb|EME99218.1| putative CBS domain-containing protein [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 216
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT + V T E L +++ PV+ + +++G+VS+ DLL +
Sbjct: 7 TVGDVMTRT--VVAVSAETPYKEIAGALARWKVSALPVLAGEGRVIGVVSEADLLVKEEY 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G R ++ VD + + +K G+ DLM+ + V + +AAR +
Sbjct: 65 KG--REPSA----VDRPERLGDP-----AKAAGRTAQDLMSAPAITVHADAPVAEAARAM 113
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+RLPVVDA+GKLVG+++R ++++ L+
Sbjct: 114 ALRGVKRLPVVDAEGKLVGVVSRADILKVYLR 145
>gi|170695632|ref|ZP_02886775.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170139431|gb|EDT07616.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 229
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ + ++ V+ I+G PV+D D +VG++S+ DLL I D +
Sbjct: 16 PDMTIRQVAKMFVDNGISGAPVLDTDGSIVGIISEGDLLRRSEIG----TDETRRASWLD 71
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
W +E + + KT+ V D+MT V V+ T L + A +L +R+PV + G+
Sbjct: 72 FWSARHEARDYV-KTHAAKVSDVMTTDVVTVQPDTPLGEVAGILEARHVKRVPVTER-GQ 129
Query: 220 LVGIITRGNVVRA 232
+VGI++R N+V+A
Sbjct: 130 VVGIVSRANLVQA 142
>gi|86748495|ref|YP_484991.1| hypothetical protein RPB_1370 [Rhodopseudomonas palustris HaA2]
gi|86571523|gb|ABD06080.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
HaA2]
Length = 171
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 28/152 (18%)
Query: 84 TVGDFMTTKEELHVVKPTT---TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
TV D MT VKP T T+ E + +PV++ + +GLV+ YD L
Sbjct: 36 TVADHMTRS-----VKPVTREMTMRELEDQFERDDYNAYPVLEGS-RAIGLVTKYDFLNC 89
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ + M P D L+++T VGD+MTP + V T L
Sbjct: 90 FAFHPT-----QMLPHYDD----------LMNRT----VGDIMTPDFIYVHADTKLTRVL 130
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+L++E + R +PV+DAD +L GII+R +V++A
Sbjct: 131 QLMVEHQTRSIPVLDADRRLEGIISREDVIKA 162
>gi|386837900|ref|YP_006242958.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098201|gb|AEY87085.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791192|gb|AGF61241.1| hypothetical protein SHJGH_1575 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 233
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + ++ + + + E R++ PV+DD ++VG+VS+ DLL
Sbjct: 8 VSDVMTRR--VVALRTGAAFKDIVRAMREWRVSALPVLDDAGRVVGVVSEADLLRKQEYG 65
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G G W + + L K + G+LMT V V L AAR+
Sbjct: 66 GGG-----------LDW--YGRARDLTGFRKADAATAGELMTAPAVTVPPDAGLAQAARI 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + +RLPVVD G L GI++R ++++ L+
Sbjct: 113 MARGEVKRLPVVDHAGMLKGIVSRSDLLKVFLR 145
>gi|372209898|ref|ZP_09497700.1| signal transduction protein with CBS domains [Flavobacteriaceae
bacterium S85]
Length = 150
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 24/153 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M + +L P V EA++ILV I+G V+D++ L+G++S+ D + I+
Sbjct: 22 VSDYMVPRSKLITFSPKLKVVEAMQILVSNDISGASVVDENDHLLGMISEGD--CMKKIA 79
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + P D T V + M P + N+ D A +
Sbjct: 80 NSRYYN---IPLHDQT------------------VEEYMEPIVETIEGDNNIFDVAHMFC 118
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
++ R PV++ D K++G I+R ++++AAL+IK
Sbjct: 119 TSRRNRFPVMEGD-KVIGQISRKDILKAALEIK 150
>gi|357634461|ref|ZP_09132339.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357583015|gb|EHJ48348.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 220
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
KP T++ +A +++ E PVIDD+ +L G+VSD D+ A S +D
Sbjct: 15 KPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDI---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ LLS+ V D+MT + + +E AA L+L LPVVD D
Sbjct: 66 -----MHELYYLLSEIK---VADIMTKKVIFIGPDDTVEKAAVLMLRNNVSGLPVVDGDS 117
Query: 219 KLVGIITRGNVVRAALQIKHATEMGAQ 245
K+VG+IT ++ + + I G Q
Sbjct: 118 KVVGVITDSDIFKVLVNITGVLNGGLQ 144
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ D M+ +PV + T++ AA+L+ E + RLPV+D +G+L GI++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDIKEAS 57
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT K + + P TV++A +++ ++G PV+D D K+VG+++D D+ L +I
Sbjct: 78 VADIMTKK--VIFIGPDDTVEKAAVLMLRNNVSGLPVVDGDSKVVGVITDSDIFKVLVNI 135
Query: 144 SG 145
+G
Sbjct: 136 TG 137
>gi|260062737|ref|YP_003195817.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
gi|88784305|gb|EAR15475.1| CBS domain protein [Robiginitalea biformata HTCC2501]
Length = 153
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 26/153 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT L P V+E +++L+ +I+G PV+++D +LVG++S+ D + S
Sbjct: 22 VRDYMT--RNLITFHPDQHVEEVIDLLIRHKISGGPVVNEDRELVGILSEGDCIKHIS-- 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
DS + Q +S MV D+ T + N+ DAA+ L
Sbjct: 78 -------------DSRYYNMPPEQNRVSNC---MVRDVET-----IDGNLNIFDAAKKFL 116
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
E K RR P+V+ +GKL G I++ ++++A + ++
Sbjct: 117 EAKRRRFPIVE-NGKLAGQISQKDILKATVALR 148
>gi|312136467|ref|YP_004003804.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224186|gb|ADP77042.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 279
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 22/139 (15%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
+E+ VV+ ++ A ++++ I+ PVI++D +LVG++S+ D+ +L I G
Sbjct: 9 DEVIVVRENDSISRARNLMLKNDISHLPVINEDEELVGILSETDIASLLKIGGPA----- 63
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
WK + +V +MT PV V +++DAA L+L LP
Sbjct: 64 --------WKR--------RPIDNILVKRIMTKNPVTVSPNEDIKDAADLMLRKDISALP 107
Query: 213 VVDADGKLVGIITRGNVVR 231
VV+ DGK++GI+T+ ++VR
Sbjct: 108 VVE-DGKILGIVTKTDLVR 125
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL- 138
G Y V D M+ +++ V TT+ ++L + I+ V+ + +G+++ D+L
Sbjct: 132 KGRYKVADLMS--KDVVTVNENTTLSHVAKLLDKNNISRV-VVTAGKEPIGIITATDILF 188
Query: 139 -ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
LD S +G A +F +K V+ + + T GD+MT + + + +L
Sbjct: 189 AKLDKPS-TGVATEKIFFVRVRPYKKKKRVRLISTLT----AGDIMTDDLITINQDFDLS 243
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
AA+++++ K LPV+D DGKLVGI+T+ +++RA
Sbjct: 244 KAAKIMIKNKIGSLPVIDDDGKLVGIVTKTDIIRA 278
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 30/138 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + +A ++++ K I+ PV++D K++G+V+ DL+ + S GR
Sbjct: 85 VSPNEDIKDAADLMLRKDISALPVVED-GKILGIVTKTDLVRIYSEKFKGR--------- 134
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+K V DLM+ V V E T L A+LL + R+ VV A
Sbjct: 135 ---YK----------------VADLMSKDVVTVNENTTLSHVAKLLDKNNISRV-VVTAG 174
Query: 218 GKLVGIITRGNVVRAALQ 235
+ +GIIT +++ A L
Sbjct: 175 KEPIGIITATDILFAKLD 192
>gi|254381628|ref|ZP_04996992.1| CBS [Streptomyces sp. Mg1]
gi|194340537|gb|EDX21503.1| CBS [Streptomyces sp. Mg1]
Length = 214
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV D MT + + E +E++ + +++ PV++ + ++VG+VS+ DLL +
Sbjct: 6 YTVSDVMTHTAV--AIGREASYKEIVELMDQWKVSAVPVLEGEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFP-EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
R D+ P ++D SK G + +LM+ V V L +AAR
Sbjct: 64 F----RQDDPQLPGQLDEA-----------SKAGGVLAEELMSSPAVTVHPDATLAEAAR 108
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++ +RLPVV+ G L G+++R ++++ L+
Sbjct: 109 IMARKHVKRLPVVNGVGMLEGVVSRSDLLKVFLR 142
>gi|87303510|ref|ZP_01086293.1| CBS protein [Synechococcus sp. WH 5701]
gi|87281923|gb|EAQ73886.1| CBS protein [Synechococcus sp. WH 5701]
Length = 144
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V PTT + EA++++ + I+G PV+D+ L+ +S+ DL+ + SG M +
Sbjct: 8 VTPTTPLQEAVKLMSDHHISGLPVLDEQGALIAELSEQDLMVRE--SGFDAGPYVMLLDA 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + K + + G VGD+M+ P L AA+LL + +RL V + +
Sbjct: 66 VIYLRNPLDWDKQVHQVLGNTVGDVMSRHPHSCSAEVTLAAAAKLLHDRSTQRLFVREGE 125
Query: 218 GKLVGIITRGNVVRA 232
+VG++TRG+VVRA
Sbjct: 126 -TVVGVLTRGDVVRA 139
>gi|332291925|ref|YP_004430534.1| signal transduction protein with CBS domains [Krokinobacter sp.
4H-3-7-5]
gi|332170011|gb|AEE19266.1| putative signal transduction protein with CBS domains
[Krokinobacter sp. 4H-3-7-5]
Length = 154
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+ K L P +V E + L++ +I+G PV++++ +L+G++S+ D + IS
Sbjct: 23 VSDYMSRK--LITFSPDQSVLEVMNNLIKHKISGGPVVNENNELLGIISEGD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + M K N + + +G M N+ DAA L
Sbjct: 79 ESRYYNMPM-----DNMKVSNHMVTNVDTIDGNM----------------NVFDAANKFL 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
E+K+RR P+V+ +GKLVG I++ +V++AAL + T
Sbjct: 118 ESKHRRFPIVE-NGKLVGQISQKDVLKAALALNGQT 152
>gi|397904553|ref|ZP_10505459.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
gi|397162411|emb|CCJ32793.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
Length = 143
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 33/159 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMTT + V P T V E +I+ +K + PV+D D K+VG+V+D D++ D
Sbjct: 3 VKDFMTT--NVAYVTPNTPVVEIAKIMKDKNVGSVPVLDGD-KVVGIVTDRDIVLRDIAF 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G K NEV L+K D+MT ++ DAAR++
Sbjct: 60 G----------------KNPNEV---LAK-------DVMTVGVTTANPNMDIHDAARIMA 93
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
E + RRLPVV+ +G+LVG++ G++ A++ K A + G
Sbjct: 94 EKQVRRLPVVE-NGRLVGMLAIGDI---AVESKLADDAG 128
>gi|323701708|ref|ZP_08113379.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333923567|ref|YP_004497147.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533244|gb|EGB23112.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333749128|gb|AEF94235.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 148
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 29/147 (19%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE----- 156
TT+ E +IL + +I+G PV+D+ KLVG+V++ DLL ++ N P+
Sbjct: 18 TTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLLHKEA--------NPRIPKFVGIL 69
Query: 157 --------VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
VD F ++ L + ++MT + V + T++ A L+LE
Sbjct: 70 GGILYFGGVDQYKDDFKKLAALKA-------SEIMTSKVITVSKDTDVGTIATLMLENNI 122
Query: 209 RRLPVVDADGKLVGIITRGNVVRAALQ 235
+R+PV ++ GK++GI++R ++++ Q
Sbjct: 123 KRIPVTES-GKVIGIVSRADIIKTIAQ 148
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+M + V + T +++ A++L + K +PVVD GKLVGI+T G+++
Sbjct: 5 DIMQTNVISVTKDTTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLLH 55
>gi|302556791|ref|ZP_07309133.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
gi|302474409|gb|EFL37502.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
Length = 231
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E L ++++ PV+D ++G+VS+ DLLA ++ + V W+
Sbjct: 9 EVARTLAREQLSAVPVVDAGDHVIGVVSESDLLAKAAVM----TEPHRHGPVGRLWQ--- 61
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+L K++G LMT PV V + DAA + RRLPV D G+LVG+++
Sbjct: 62 --HRLYDKSHGDTAATLMTFPPVTVHPAERVSDAAWAAAHARLRRLPVTDHRGRLVGVVS 119
Query: 226 RGNVVRAALQ 235
R +++RA ++
Sbjct: 120 RRDLLRALIR 129
>gi|421277076|ref|ZP_15727896.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
gi|395876357|gb|EJG87433.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
Length = 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD +G+L G+IT +V A L+I E G
Sbjct: 103 KNKIGILPVVD-NGQLYGVITDRDVFSAFLEIAGYGEDG 140
>gi|384197111|ref|YP_005582855.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109832|gb|AEF26848.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
Length = 683
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDNQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 LKS 582
>gi|220904801|ref|YP_002480113.1| hypothetical protein Ddes_1533 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869100|gb|ACL49435.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 223
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 19/159 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D+M K + V P T++ + ++L + RI PV+D D +VGL++ DL A
Sbjct: 5 DWM--KPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADLKA------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
F +T E +L++T V D+M APV + +E AA+ + +
Sbjct: 56 -------FAPQHTTGFEILEALDILAETK---VKDVMVVAPVTIHYNNTVEQAAKTMFDR 105
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
LPV+D + KLVGIIT ++ A L + A + G +
Sbjct: 106 HVACLPVIDDEDKLVGIITGWDIFHALLNMSGAEQGGEE 144
>gi|116747758|ref|YP_844445.1| hypothetical protein Sfum_0309 [Syntrophobacter fumaroxidans MPOB]
gi|116696822|gb|ABK16010.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 230
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ ++ A+ ++ E +I PV+ KLVG+VSD DL RA S
Sbjct: 14 IEEDDSMQHAMSLMKEHKIRMLPVVAR-GKLVGVVSDTDL---------KRASAS----- 58
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D+T +E+ L+SK V D+MT P+ V + +E+ A LL+ K PV+D D
Sbjct: 59 DATTLDMHELLYLISKIK---VQDIMTKTPITVSQNFTVEETAELLMRKKISGCPVLDDD 115
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
G +VG+ITR ++ + + + + G Q
Sbjct: 116 GLVVGVITRDDLFKVLIMLSGLGKKGIQ 143
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V + M+ V + E +++ A L+ E K R LPVV A GKLVG+++ ++ RA+
Sbjct: 2 LVKNWMSKTVVTIEEDDSMQHAMSLMKEHKIRMLPVV-ARGKLVGVVSDTDLKRAS 56
>gi|46190448|ref|ZP_00121474.2| COG0477: Permeases of the major facilitator superfamily
[Bifidobacterium longum DJO10A]
gi|189439522|ref|YP_001954603.1| major facilitator superfamily permease [Bifidobacterium longum
DJO10A]
gi|189427957|gb|ACD98105.1| permease of the major facilitator superfamily [Bifidobacterium
longum DJO10A]
Length = 683
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|322385954|ref|ZP_08059594.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|417922506|ref|ZP_12565994.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|321269937|gb|EFX52857.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|342832603|gb|EGU66898.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
Length = 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +I+ ++++ PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADIMRDQKLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIHDVVTISQYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + ++ GIIT ++ +A L++ E G +
Sbjct: 103 KNKIGILPVVDNE-QVYGIITDRDIFKAFLEVSGYGEKGVR 142
>gi|329938549|ref|ZP_08287974.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
gi|329302522|gb|EGG46413.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
Length = 253
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 26/153 (16%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TVG MT ++ + TT E + +L RI G PV+D+D K+VG++S DL+ +
Sbjct: 4 HTVGQVMTG--DVVQARRTTPFKELVRLLDRHRIGGLPVVDEDDKVVGVLSGTDLVRAQA 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
SGRA DLM+ V V ++ DAARL
Sbjct: 62 -GRSGRA-----------------------PAGAVTAQDLMSTPAVTVHPEQSVPDAARL 97
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ RLPV+D + +L+GI TR +++R L+
Sbjct: 98 MERRGVERLPVIDEEDRLIGIATRRDLLRVFLR 130
>gi|288929624|ref|ZP_06423468.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
gi|288329129|gb|EFC67716.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
Length = 494
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 48/173 (27%)
Query: 77 APSSGVYTVGDFMTTKEELH---VVK---------PTT-----TVDEALEILVEKRITGF 119
A G+ + M+ +E+ H VVK P T TV +AL+++ + I G
Sbjct: 67 AREGGIGVIHKNMSIEEQAHEVAVVKRAENGMIYDPVTIRRGRTVKDALDMMRDYHIGGI 126
Query: 120 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179
PV+D+D LVG+V++ DL R ++ + ++D + N
Sbjct: 127 PVVDEDNCLVGIVTNRDL----------RFEHRLDKKIDEVMTSEN-------------- 162
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
VV + T+L AA++L E K +LPVVDA+ ++VG+IT ++ +A
Sbjct: 163 -------LVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITKA 208
>gi|225012062|ref|ZP_03702499.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
gi|225003617|gb|EEG41590.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
Length = 154
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +L V KP T+ +E ++ RI+G PV++++ LVG++S+ D + I
Sbjct: 22 TVSDIMT--HQLIVFKPEDTIHVVMEAFIKNRISGGPVVNEEGDLVGVISEAD--CMKEI 77
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S S + FN +L K+ V MT + ++ DAA L
Sbjct: 78 SDS---------------RYFN--MPILDKS----VSYFMTKKVDTIESNMSVFDAAALF 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
++ RR PV+ + +LVG ++R ++V AAL +K T
Sbjct: 117 SKSSRRRYPVMKGN-RLVGQVSRKDIVIAALNMKSHT 152
>gi|291456610|ref|ZP_06596000.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|417943311|ref|ZP_12586561.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
gi|291381887|gb|EFE89405.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|376165621|gb|EHS84569.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
Length = 692
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 618 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 677
Query: 229 VVRAAL 234
V+ A
Sbjct: 678 VMEHAF 683
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 230 VRA 232
+++
Sbjct: 589 LKS 591
>gi|302392563|ref|YP_003828383.1| signal transduction protein with CBS domains [Acetohalobium
arabaticum DSM 5501]
gi|302204640|gb|ADL13318.1| putative signal transduction protein with CBS domains
[Acetohalobium arabaticum DSM 5501]
Length = 306
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 30/151 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T+ D MTT ++ + P + A EI+ ++I+G P++D + +L+G++S D+ I
Sbjct: 17 TINDIMTT--DVITLHPDNKLKNAKEIMRLRKISGIPIVDQNKRLLGIISIDDI-----I 69
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G E KL +K N M DL+T V + ++ D
Sbjct: 70 QGL-------------------EYNKLDNKINSLMSTDLIT----VNNQNNSIGDVLFKF 106
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ K+ RLPV+D + KLVGIIT G++ R L
Sbjct: 107 KKYKFGRLPVIDNNNKLVGIITPGDITRKLL 137
>gi|15607007|ref|NP_214389.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
gi|6016372|sp|O67820.1|IMDH_AQUAE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|2984252|gb|AAC07779.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
Length = 490
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 29/134 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T V EAL+I+ + +I+G PV+D++ KL+G++++ DL + PE
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDLRFIK-------------PED 149
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S V + ++K N + AP E L++A + + K +LP+VD +
Sbjct: 150 YS-----KPVSEFMTKEN-------LITAP----EGITLDEAEEIFRKYKIEKLPIVDKE 193
Query: 218 GKLVGIITRGNVVR 231
GK+ G+IT ++V+
Sbjct: 194 GKIKGLITIKDIVK 207
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V +FMT KE L T+DEA EI + +I P++D + K+ GL++ D++
Sbjct: 154 VSEFMT-KENLITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIV 206
>gi|225181720|ref|ZP_03735159.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225167591|gb|EEG76403.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 153
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+ MTT +L + T+ E ++++VE+ I+G PVID+ L+G+VS+ D++ L
Sbjct: 5 EIMTT--DLVTIAEDKTLREVIKLMVEQNISGIPVIDETGNLMGIVSESDVIRL------ 56
Query: 147 GRADNSMFPEVDSTWKTFNEVQ------KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ M + NE Q ++ N V D MT V V+E T L +
Sbjct: 57 -KRKTHMPDYIQLLEAMLNEAQPEQFSADVIRSLNMP-VKDFMTKKVVTVKEDTTLAEIT 114
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
RL++E R+PVV KL+GI+TR + + A
Sbjct: 115 RLMVEHNINRIPVV-RKQKLLGIVTRRDAILA 145
>gi|296453971|ref|YP_003661114.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. longum JDM301]
gi|296183402|gb|ADH00284.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. longum JDM301]
Length = 683
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|269469032|gb|EEZ80596.1| signal-transduction protein [uncultured SUP05 cluster bacterium]
gi|269469202|gb|EEZ80738.1| hypothetical protein Sup05_0144 [uncultured SUP05 cluster
bacterium]
Length = 148
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 19/155 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T + V P V + +++ I+G PV+DD LVG++S+ D+L
Sbjct: 3 VQDIMST--NVKTVGPDDLVKDIAILMIMDHISGAPVVDDGNNLVGIISEKDIL------ 54
Query: 145 GSGRADNSMFPEVDS----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
MFP++D T+ F ++ T +G+LMT + AA
Sbjct: 55 ------QHMFPKLDEVMSDTYFDFENMEHNYKDTMNVKIGELMTKEVASIDLDMPCLKAA 108
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ ++RR+PV GKLVGI++ G+V RA +
Sbjct: 109 STMWLKRFRRIPVTHK-GKLVGIVSIGDVHRAIFK 142
>gi|111025031|ref|YP_707451.1| hypothetical protein RHA1_ro08249 [Rhodococcus jostii RHA1]
gi|110824010|gb|ABG99293.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 183
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 31/154 (20%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + VV+ + ++ A +L E PV+DD +LVG+++ D+L RA
Sbjct: 6 QRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RA-- 54
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+T + VG++MT V L D +++LL+ R L
Sbjct: 55 --------------------GQTCSETVGEVMTAPAVAAPMYHYLADVSQMLLQQGLRSL 94
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
PVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 95 PVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 128
>gi|384105704|ref|ZP_10006619.1| hypothetical protein W59_30209 [Rhodococcus imtechensis RKJ300]
gi|383835041|gb|EID74471.1| hypothetical protein W59_30209 [Rhodococcus imtechensis RKJ300]
Length = 185
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 31/154 (20%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + VV+ + ++ A +L E PV+DD +LVG+++ D+L RA
Sbjct: 8 QRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RA-- 56
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+T + VG++MT V L D +++LL+ R L
Sbjct: 57 --------------------GQTCSETVGEVMTAPAVAAPMYHYLADVSQMLLQQGLRSL 96
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
PVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 97 PVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 130
>gi|312132929|ref|YP_004000268.1| permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
gi|311773905|gb|ADQ03393.1| Permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
Length = 683
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G++M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGEIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 LKS 582
>gi|57640129|ref|YP_182607.1| inosine 5'-monophosphate dehydrogenase [Thermococcus kodakarensis
KOD1]
gi|57158453|dbj|BAD84383.1| inosine-5'-monophosphate dehydrogenase [Thermococcus kodakarensis
KOD1]
Length = 486
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 34/139 (24%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ +KP ++D AL ++ + G PV+DD+ ++VG+++ D+ A
Sbjct: 101 EDVISIKPDESLDYALFLMERNGVDGLPVVDDEGRVVGVITKKDIAA------------- 147
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G V ++MT + V ET E+A +++ + + RLP
Sbjct: 148 ---------------------KQGSKVSEVMTGEVITVPETVTAEEAVQIMFDHRIDRLP 186
Query: 213 VVDADGKLVGIITRGNVVR 231
VVD +G+LVGIIT ++ +
Sbjct: 187 VVDGEGRLVGIITMSDLAK 205
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G V + MT E+ V T T +EA++I+ + RI PV+D + +L
Sbjct: 138 GVITKKDIAAKQG-SKVSEVMTG--EVITVPETVTAEEAVQIMFDHRIDRLPVVDGEGRL 194
Query: 129 VGLVSDYDL 137
VG+++ DL
Sbjct: 195 VGIITMSDL 203
>gi|395645474|ref|ZP_10433334.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
gi|395442214|gb|EJG06971.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
Length = 283
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 36/158 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K+ + V P+ D+ L+IL I+G PV + K+VG+V+ DLL
Sbjct: 3 VQDYMT-KDVVSVEIPSNR-DDILKILKRTGISGIPV-RERGKVVGVVTRKDLL------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
K+ V LM+P PVVV T L DAA +++
Sbjct: 54 ---------------------------RKSEETQVALLMSPKPVVVTPDTPLSDAAAVMV 86
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 242
YRRLPVVD +G LVG+++ +++ A Q++ E+
Sbjct: 87 RHNYRRLPVVDDNGSLVGLLSVADLIAAIAQLRIKDEI 124
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 40/172 (23%)
Query: 81 GVYTVGDFMTTKEELHV----------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130
GV T D + EE V V P T + +A ++V PV+DD+ LVG
Sbjct: 45 GVVTRKDLLRKSEETQVALLMSPKPVVVTPDTPLSDAAAVMVRHNYRRLPVVDDNGSLVG 104
Query: 131 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
L+S DL+A +I+ D + ST+ + E TP P+V
Sbjct: 105 LLSVADLIA--AIAQLRIKDEIRDYYLSSTFALWEE-----------------TPLPLV- 144
Query: 191 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 242
R++ + +P++D G + GII+ +++R + I+ + E+
Sbjct: 145 ---------GRIMEISDVEAVPIMDERGVVSGIISERDLIRNS-HIEDSVEV 186
>gi|383790514|ref|YP_005475088.1| putative signal transduction protein [Spirochaeta africana DSM
8902]
gi|383107048|gb|AFG37381.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Spirochaeta africana DSM 8902]
Length = 212
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 18/139 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ TT+V +A +L + R PV+++ KL+G+VS+ DLL G
Sbjct: 14 VEKTTSVTDAQALLRQGRFHRLPVLNNRQKLIGIVSEKDLLYAAPSPG------------ 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
T E+ +LL+K N VGD+MT + V T +EDAA ++++ LPV+ D
Sbjct: 62 --TALDVYEMSELLNKLN---VGDVMTEDVITVDADTLVEDAAGIMVDNNIGGLPVMQ-D 115
Query: 218 GKLVGIITRGNVVRAALQI 236
G+L+GI+T ++ R +++
Sbjct: 116 GQLIGIVTESDLFRLFIEL 134
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V +MT +PV V +TT++ DA LL + ++ RLPV++ KL+GI++ +++ AA
Sbjct: 3 VAAIMTGSPVTVEKTTSVTDAQALLRQGRFHRLPVLNNRQKLIGIVSEKDLLYAA 57
>gi|90422168|ref|YP_530538.1| hypothetical protein RPC_0646 [Rhodopseudomonas palustris BisB18]
gi|90104182|gb|ABD86219.1| CBS [Rhodopseudomonas palustris BisB18]
Length = 332
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT ++ VV P ++ E IL+ R++ PV+D D +G+VS++DL+ +
Sbjct: 5 DVMTT--DVSVVGPNSSSAEVARILLATRVSALPVVDHDGAPIGVVSEWDLVGQHATDRV 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
+ + + + + +Q + TN + ++M + V ETT + + ARL+ E
Sbjct: 63 AKRERWLSHLAEGQPLAADFLQS-VDPTN-RTTAEIMHQPVIAVPETTPIAEVARLIAEH 120
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ +R+ V D +LVG+++R ++VRA L
Sbjct: 121 RIKRVFVTRGD-RLVGVVSRIDLVRAHL 147
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
D+MT VV ++ + AR+LL T+ LPVVD DG +G+++ ++V +HAT
Sbjct: 5 DVMTTDVSVVGPNSSSAEVARILLATRVSALPVVDHDGAPIGVVSEWDLVG-----QHAT 59
Query: 241 EMGAQ 245
+ A+
Sbjct: 60 DRVAK 64
>gi|448451851|ref|ZP_21593023.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|448483974|ref|ZP_21605911.1| peptidase M50 [Halorubrum arcis JCM 13916]
gi|445810067|gb|EMA60099.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|445820458|gb|EMA70278.1| peptidase M50 [Halorubrum arcis JCM 13916]
Length = 394
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +++LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVDADG LVG+I+R +++ A
Sbjct: 339 QEHGVGRLPVVDADGALVGLISRSDLMTA 367
>gi|313204351|ref|YP_004043008.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
propionicigenes WB4]
gi|312443667|gb|ADQ80023.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
propionicigenes WB4]
Length = 492
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ TV +AL ++ E +I G PV+D+ LVG+V++ DL R M EV
Sbjct: 104 IRKGATVGDALALMAEYKIGGIPVVDEQGYLVGIVTNRDL----------RFQRDMDKEV 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D+ +++K N L+T +T+LE AA +L + K +LPVVD +
Sbjct: 154 DA----------IMTKEN------LITTT-----RSTDLEAAADILQQFKIEKLPVVDEN 192
Query: 218 GKLVGIITRGNVVRA 232
KLVG++T ++ +A
Sbjct: 193 NKLVGLLTYKDITKA 207
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
M PV +R+ + DA L+ E K +PVVD G LVGI+T
Sbjct: 97 MISNPVTIRKGATVGDALALMAEYKIGGIPVVDEQGYLVGIVT 139
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL + +I PV+D++ KLVGL++ D+
Sbjct: 154 DAIMTKENLITTTRSTDLEAAADILQQFKIEKLPVVDENNKLVGLLTYKDI 204
>gi|221632822|ref|YP_002522044.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
gi|221156254|gb|ACM05381.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
Length = 166
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 75/136 (55%), Gaps = 9/136 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+V E ++ E I+G PVID+ +++G+V+++DL+A ++ + P +
Sbjct: 18 ISPETSVGEIARLMWEHAISGVPVIDEQRRVIGIVTEFDLIAREASFNA----PLYVPFL 73
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
D+ +K T +E Q L K ++M+ + + +E A L+ + +PVV
Sbjct: 74 DAFFKVPGTGDETQ--LRKILATKAAEIMSSPAITIGPEETIEALATLMYRRRVNPVPVV 131
Query: 215 DADGKLVGIITRGNVV 230
D +G+L+GI++R +++
Sbjct: 132 DEEGRLLGIVSRSDLI 147
>gi|405983346|ref|ZP_11041652.1| hypothetical protein HMPREF9451_00742 [Slackia piriformis YIT
12062]
gi|404388952|gb|EJZ84033.1| hypothetical protein HMPREF9451_00742 [Slackia piriformis YIT
12062]
Length = 165
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG M + + + T+ + + L+++ ++ PV+DDD +VG +SD D++
Sbjct: 5 TVGSIM--ERDAYSCSAQATLKDVTKSLIDRGVSSLPVVDDDNHVVGFISDGDIMR---- 58
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV---QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ + S+F T +++ QK+LS + V +L T + V E ++ A
Sbjct: 59 AIAEHKTRSIFSGGAPTMLYYDDETIEQKVLS-LRERNVMELATRKVLCVTENQSVGRVA 117
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
L + K+++LPV+D G+LVG+I R +++R A ++
Sbjct: 118 DTLAKKKFKKLPVIDEHGRLVGVIRRSSIMRYAFEL 153
>gi|406834873|ref|ZP_11094467.1| hypothetical protein SpalD1_24628 [Schlesneria paludicola DSM
18645]
Length = 180
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 33/149 (22%)
Query: 84 TVGDFMTTKEELHV-VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
TV D M E+ V V P T DEALE E V+D+ L+G++ DY+LL
Sbjct: 4 TVADLMC---EMPVTVGPECTTDEALEAFYEHETPELYVVDESGFLLGVLPDYELLK--- 57
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+L ++ G V LM+ + V R +++ AR
Sbjct: 58 -------------------------AQLSGESKGACVEQLMSTSVPVCRSSSDAAGVARA 92
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVR 231
+++ R+PVV A G+LVG++TR +V+R
Sbjct: 93 FRDSQCNRMPVVQA-GRLVGVVTRADVLR 120
>gi|290955600|ref|YP_003486782.1| hypothetical protein SCAB_10371 [Streptomyces scabiei 87.22]
gi|260645126|emb|CBG68212.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 209
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV D MT + V E +++ + +++ PV++ + ++VG+VS+ DLL
Sbjct: 7 YTVSDVMT--HTVVAVGRDAPFKEIVQLFDQWKVSALPVLEGEGRVVGVVSEADLL---- 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
F + D F + K + T G+LM V V +L +AAR+
Sbjct: 61 -------HKEEFRDADERQGDFADRLKAGAVT----AGELMNAPAVSVHPDASLAEAARI 109
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ K +RLPVVD G L G+++RG++++ L+
Sbjct: 110 MARRKVKRLPVVDRVGMLQGVVSRGDLLKVFLR 142
>gi|302555051|ref|ZP_07307393.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302472669|gb|EFL35762.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 221
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 167
+E++ + +++ PV++ + +++G+VS+ DLL + DS F ++
Sbjct: 29 VEVMEQWKVSALPVLEGEGRVIGVVSEADLLFKEEFR-------------DSDPDRFTQL 75
Query: 168 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+L L K G DLM+ V V L AAR++ + K +RLPVV+ +G L G+++
Sbjct: 76 GRLSDLVKAGGMTAEDLMSSPAVTVHTDATLAQAARIMAQRKVKRLPVVNEEGLLEGVVS 135
Query: 226 RGNVVRAALQ 235
R ++++ L+
Sbjct: 136 RADLLKVFLR 145
>gi|119026509|ref|YP_910354.1| efflux transporter protein [Bifidobacterium adolescentis ATCC
15703]
gi|118766093|dbj|BAF40272.1| possible efflux transporter protein [Bifidobacterium adolescentis
ATCC 15703]
Length = 692
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 618 SKVQALSGKKVMDIATHKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 677
Query: 229 VVRAAL 234
V+ A
Sbjct: 678 VMEHAF 683
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 230 VRA 232
+++
Sbjct: 589 MKS 591
>gi|260435379|ref|ZP_05789349.1| hypothetical protein SH8109_2383 [Synechococcus sp. WH 8109]
gi|260413253|gb|EEX06549.1| hypothetical protein SH8109_2383 [Synechococcus sp. WH 8109]
Length = 157
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + + V P T + +A++++ + ++G PV++ + +L+G +++ DL+ +S
Sbjct: 6 TVADVMT--QPVLTVTPDTPLQQAVQMISDHHVSGLPVVNVEGRLIGELTEQDLMVRESG 63
Query: 144 SGSGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G V DLM R L A
Sbjct: 64 VDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GTKVSDLMRKDSHSCRTELALPKA 117
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A L E +RL V+D++ VG+ITRG+VVRA
Sbjct: 118 ASQLHERGTQRLFVLDSNQCPVGVITRGDVVRA 150
>gi|121595740|ref|YP_987636.1| signal transduction protein [Acidovorax sp. JS42]
gi|120607820|gb|ABM43560.1| putative signal transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 226
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 21/174 (12%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118
LR AV A P + VGD MTT V P V++A + L E I
Sbjct: 63 LRLLEAVSAYVQTEQGPVQPRQPLSRVGDVMTTGA--LTVAPDQRVNDAWQTLAEHEIAQ 120
Query: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178
PV++D ++VGL+ D+ LD + PE + + ++ +S+
Sbjct: 121 APVVNDQGQVVGLLLRADMAPLD-----------LLPEPGAVKQAIELARRPVSEV---- 165
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++P P V E T L A +LL+T LPV D G L G I+R +++RA
Sbjct: 166 ---MVSPVPTVA-EDTELRRVAGVLLDTGLPGLPVTDERGLLAGFISRTDILRA 215
>gi|386586288|ref|YP_006082690.1| putative signal transduction protein [Streptococcus suis D12]
gi|353738434|gb|AER19442.1| putative signal transduction protein with CBS domains
[Streptococcus suis D12]
gi|451937306|gb|AGF87609.1| CBS family protein [Streptococcus phage phiD12]
Length = 218
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 21/162 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TT+ A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTIAHAADIMREQYLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDATYLM 101
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD +G+L G+IT ++ A L + E G +
Sbjct: 102 YKNKVGILPVVD-NGQLYGVITDRDIFAAFLHVSGYGEEGVR 142
>gi|405981317|ref|ZP_11039644.1| inosine-5'-monophosphate dehydrogenase [Actinomyces neuii BVS029A5]
gi|404392241|gb|EJZ87301.1| inosine-5'-monophosphate dehydrogenase [Actinomyces neuii BVS029A5]
Length = 501
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 30/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V PT T+DE ++ R++G PV+D+D L+G++++ DL + S
Sbjct: 101 VHPTATIDELDKLCGHYRVSGLPVVDEDDTLLGIITNRDLRFIPS--------------- 145
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDA 216
S W V + MTP P++ + + E+A +LL + + +LP++D
Sbjct: 146 -SKWSQMT-------------VQEAMTPMPLITGKVGISREEAKQLLAQHRIEKLPILDE 191
Query: 217 DGKLVGIITRGNVVR 231
DG L G+IT + V+
Sbjct: 192 DGHLAGLITVKDFVK 206
>gi|39934295|ref|NP_946571.1| hypothetical protein RPA1220 [Rhodopseudomonas palustris CGA009]
gi|192289823|ref|YP_001990428.1| signal-transduction protein with CBS domains [Rhodopseudomonas
palustris TIE-1]
gi|39648143|emb|CAE26663.1| CBS domain [Rhodopseudomonas palustris CGA009]
gi|192283572|gb|ACE99952.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris TIE-1]
Length = 338
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + V+P T V E L++ I+ PV+D +G+VS+ DL+
Sbjct: 4 ADVMTTA--IVTVQPETPVHAIAETLLKHGISAVPVVDGAGVPLGIVSEGDLMP------ 55
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKL------LSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
RAD+ D + +E + + K++ + D+M V V ETT L D
Sbjct: 56 --RADSDREARHDWWLQMLSEGEAVHPDYVRFLKSDTRTAKDVMVGPVVTVEETTALADI 113
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238
A LL+E + +R+PVV A G +VGI++R ++++ + H
Sbjct: 114 ADLLVEKRIKRVPVVRA-GHIVGIVSRADLLKTMTGLNH 151
>gi|347731091|ref|ZP_08864196.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347520105|gb|EGY27245.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 142
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD M+T L +K T ++ A ++ RI P++D GL++ D+L+
Sbjct: 4 VGDLMSTG--LFTLKKTDSLRAARSLMQLARIRHIPIVDAKGDFQGLLTHRDILS----- 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S F +VD + NE+ +G VG++M V V T L DAA LLL
Sbjct: 57 ----ATISRFADVDEAVQ--NEID------SGIPVGEIMRTDVVCVHPGTLLRDAAELLL 104
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
KY LPV + D +LVGI+T + ++ + + A E
Sbjct: 105 HHKYGCLPVTE-DNRLVGIVTEADFLKLTISLLDAVE 140
>gi|316932763|ref|YP_004107745.1| putative signal transduction protein [Rhodopseudomonas palustris
DX-1]
gi|315600477|gb|ADU43012.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris DX-1]
Length = 338
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + V+P T V E L+ I+ PV+D +G+VS+ DL+ D +
Sbjct: 4 ADVMTTA--IVTVQPDTPVHAIAETLLRHGISAVPVVDGHGAPLGIVSEGDLMPRDDTAR 61
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
R D + ++ S + + K++ + D+M V V ET L D A +L+E
Sbjct: 62 EARHD--WWLQILSEGEAVHPDYLRFLKSDTRTARDVMVGPVVTVEETAALADVADVLVE 119
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238
+ +R+PV+ A G++VGI++R ++++ H
Sbjct: 120 KRIKRVPVLRA-GRIVGIVSRADLLKTMTGTNH 151
>gi|118602320|ref|YP_903535.1| signal-transduction protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567259|gb|ABL02064.1| putative signal-transduction protein with CBS domains [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 146
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T + V P + I+V I+G PV+DDD LVG++S+ D+L
Sbjct: 3 VQDIMST--NVKTVTPDQLAKDIAIIMVMDHISGAPVVDDDNNLVGIISEKDILQ----- 55
Query: 145 GSGRADNSMFPEVDS----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
MFP++D T+ F ++ T VG+LMT + + AA
Sbjct: 56 -------HMFPKLDEVMSDTYFDFENMEHNYKNTMNVKVGELMTKDVASIDLSMPCLKAA 108
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ RR+PV + KLVGI++ G+V RA +
Sbjct: 109 STMWLRNIRRIPVT-HNNKLVGIVSIGDVHRAIFK 142
>gi|116071000|ref|ZP_01468269.1| CBS [Synechococcus sp. BL107]
gi|116066405|gb|EAU72162.1| CBS [Synechococcus sp. BL107]
Length = 157
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + + V+ T + EA++++ + ++G PV+D+ L+G +S+ DL+ +S
Sbjct: 6 TVADVMT--KPVLTVRADTPLQEAVKLISDHHVSGLPVVDEQGALIGELSEKDLMVRESG 63
Query: 144 SGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G VG+LM T +L A
Sbjct: 64 VDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GTTVGELMQKNSHSCIGTLDLPKA 117
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A +L +RL V+D + +G++TRG+VVRA
Sbjct: 118 ASMLHNKGTQRLFVLDHEKHPIGVLTRGDVVRA 150
>gi|372273001|ref|ZP_09509049.1| hypothetical protein MstaS_18049 [Marinobacterium stanieri S30]
Length = 137
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 25/148 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M T L P T + +A+ L E I+G PV+D + LVG++S+ D L
Sbjct: 7 VQDYMATN--LISFSPETGLFDAIRALQEYGISGAPVVDAEGALVGMLSELDCL------ 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
RA +T++E + +G VG M+ + +L +AARL +
Sbjct: 59 ---RA---------ILTQTYHEEEM----GSGGHVGRYMSSPVETIDYGADLTEAARLFI 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ K RR+PVV GKLVG I+R +V+RA
Sbjct: 103 DKKLRRMPVVRG-GKLVGQISRRDVLRA 129
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL-QIK 237
V D M + T L DA R L E PVVDA+G LVG+++ + +RA L Q
Sbjct: 7 VQDYMATNLISFSPETGLFDAIRALQEYGISGAPVVDAEGALVGMLSELDCLRAILTQTY 66
Query: 238 HATEMGA 244
H EMG+
Sbjct: 67 HEEEMGS 73
>gi|404496740|ref|YP_006720846.1| hypothetical protein Gmet_1882 [Geobacter metallireducens GS-15]
gi|418065311|ref|ZP_12702685.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
gi|78194344|gb|ABB32111.1| CBS domain pair-containing protein [Geobacter metallireducens
GS-15]
gi|373562489|gb|EHP88700.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
Length = 149
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT ++ VK TT+ E EI + R+ PV+D+ L+G+V++ DL+ D
Sbjct: 4 VRDIMTT--DVVSVKRETTIRELAEIFTKHRVGSVPVVDESGNLIGIVTESDLIEQDK-- 59
Query: 145 GSGRADNSMFPEVDS--TWKTFNE----VQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ P V S W + E +K L K G+ VGDL T +V T + +
Sbjct: 60 ------SLHIPTVISLFDWVIYLESEKKFEKELQKMTGQTVGDLYTDTAEMVTPDTPVSE 113
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
A ++ K LPVV+ +LVG+++R +++R ++
Sbjct: 114 VADIMSSKKLHALPVVEG-KRLVGMVSRIDLIRTMVK 149
>gi|229817773|ref|ZP_04448055.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785562|gb|EEP21676.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 683
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE-VDSTWKTFNE--V 167
+ ++ PV++ D +LVG VSD D+L SI+ ++ P ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIA---TYESRTVPTGTGSTMVVFDDETV 607
Query: 168 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 227
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R
Sbjct: 608 ASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRK 667
Query: 228 NVVRAAL 234
+V+ A
Sbjct: 668 SVMEHAF 674
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 LKS 582
>gi|299535418|ref|ZP_07048740.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|424737584|ref|ZP_18166035.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
gi|298729179|gb|EFI69732.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|422948439|gb|EKU42818.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
Length = 215
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155
+ + PT TV EAL+++ EK++ PV+DD+ ++G++++ D+ + S ++ +F
Sbjct: 12 YTLAPTNTVQEALKLMREKKVRHLPVVDDEQHVLGVITERDIKEVLPSSLQDEPNSPIF- 70
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
N K V D+M P++ +E+ A E+K LP+V
Sbjct: 71 -------------------NAK-VEDIMVKDPLIGHPLDFVEEVALTFYESKIGCLPIVS 110
Query: 216 ADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
GKLVGI+T +++ +++ ATE G++
Sbjct: 111 G-GKLVGIVTTTDLLYTYIELTGATEPGSK 139
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
+V ++M P + T +++A +L+ E K R LPVVD + ++G+IT ++
Sbjct: 2 IVEEIMNDKPYTLAPTNTVQEALKLMREKKVRHLPVVDDEQHVLGVITERDI 53
>gi|288932598|ref|YP_003436658.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288894846|gb|ADC66383.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 278
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 43/157 (27%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E++ ++ T D+ +E+ + I+ PV+ D KLVG+++ D+L
Sbjct: 5 DVMT--EDVIFIELPNTRDKVIELFKKHGISAVPVVKDG-KLVGIITRKDIL-------- 53
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
K V LMTP P V T+L++ AR+LL+T
Sbjct: 54 -------------------------RKVEEDQVAFLMTPNPTTVTPDTDLKEVARILLDT 88
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+RRLPVV+ +GKLVGIIT ++ I+ +EMG
Sbjct: 89 HFRRLPVVE-NGKLVGIITVRDI------IEKISEMG 118
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 81 GVYTVGDFMTTKEELHVVKPT--------------TTVDEALEILVEKRITGFPVIDDDW 126
G+ TV D + E+ + KP T ++ A EI+ + PV+DD+
Sbjct: 103 GIITVRDIIEKISEMGIDKPVKDFVNPNAVCVWQETPLNVAGEIMRLANVEFCPVLDDNA 162
Query: 127 KLVGLVSDYDLLA-------LDSISGSGRADNSMFPEVDSTWK---------TFNEVQKL 170
+VG++ + LL L+S S +D D W + EV L
Sbjct: 163 SIVGVIDEKILLTETLIEEFLESTQYSSSSD------FDDAWSWESIRDYSVKYFEVSVL 216
Query: 171 -LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L K K M A V V T++ AA+ ++ +PV+DA+G++VGI+ N+
Sbjct: 217 KLPKEPAK---KFMKKA-VFVYPQTSVSKAAKEMVRNDLDFIPVIDANGRVVGILPDKNL 272
Query: 230 VRAALQ 235
+R ++
Sbjct: 273 LRVLVE 278
>gi|116254732|ref|YP_770568.1| hypothetical protein pRL100290 [Rhizobium leguminosarum bv. viciae
3841]
gi|115259380|emb|CAK10515.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 160
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 147
MTT +L V P TV EA ++ +T PV+D D + +GLVS+ D++
Sbjct: 8 MMTT--DLVTVSPEATVAEAARCMLIHHVTAVPVVDADNRPLGLVSEGDVM--------- 56
Query: 148 RADNSMFPEVDSTW-KTFNEVQKLLS------KTNGKMVGDLMTPAPVVVRETTNLEDAA 200
R S F + W + E + L + N + V ++M A + E +L + A
Sbjct: 57 RHFGSQFQSERAQWLRMLAEGETLAPEFLAEIRLNQQHVREIMHTAIISAGEEASLAELA 116
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
L+L+ +R+P++ DG LVGI++R +VVRA ++
Sbjct: 117 DLMLKHGIKRVPIL-RDGVLVGIVSRADVVRAVVE 150
>gi|427702070|ref|YP_007045292.1| contains C-terminal CBS domains [Cyanobium gracile PCC 6307]
gi|427345238|gb|AFY27951.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cyanobium gracile PCC 6307]
Length = 155
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V TT + EA++++ + I+G PV+D+ LVG +S+ DL+ +S G M +
Sbjct: 18 VTTTTPLQEAVQLMSDHHISGLPVLDELGALVGELSEQDLMVRES--GFDAGPYVMLLDA 75
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + K + + G VGD+M P T L AARLL + +RL V+D
Sbjct: 76 VIYLRNPLDWDKQVHQVLGSTVGDVMGSKPHSCPAATTLPAAARLLHDRGTQRLFVLDDQ 135
Query: 218 GKLVGIITRGNVVRA 232
LVG++TRG+VVRA
Sbjct: 136 QALVGVLTRGDVVRA 150
>gi|418466974|ref|ZP_13037875.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
gi|371552443|gb|EHN79690.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
Length = 224
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + + V+ T E +L+E IT PV+D + + VG+VS+ DLL +
Sbjct: 5 TVRDLMS--DAVVRVQRGTPFKEIAHLLLEYDITAVPVVDGENRPVGVVSEADLL--QKM 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G G D S PE + + + +G LMT P+ RE+ ++ +AAR++
Sbjct: 61 WG-GEPDGS--PEHAEWSRAAAAGKADATDADG-----LMTSPPLCARESWSVVEAARVM 112
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
+ +RL VVD +G+L G+++R +++R L+ A
Sbjct: 113 ARHRIKRLLVVDEEGRLAGVVSRSDLLRVFLRTDRA 148
>gi|309798594|ref|ZP_07692869.1| CBS domain protein [Streptococcus infantis SK1302]
gi|308117830|gb|EFO55231.1| CBS domain protein [Streptococcus infantis SK1302]
Length = 218
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRNVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPV+D + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVIDNE-QVYGVITDRDVFRAFLEISGYGEEG 140
>gi|315221921|ref|ZP_07863832.1| CBS domain pair protein [Streptococcus anginosus F0211]
gi|421491265|ref|ZP_15938631.1| CBS domain protein [Streptococcus anginosus SK1138]
gi|315188887|gb|EFU22591.1| CBS domain pair protein [Streptococcus anginosus F0211]
gi|400371367|gb|EJP24326.1| CBS domain protein [Streptococcus anginosus SK1138]
Length = 218
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|212638309|ref|YP_002314829.1| acetoin utilization protein [Anoxybacillus flavithermus WK1]
gi|212559789|gb|ACJ32844.1| Acetoin utilization protein (CBS, ACT domains) [Anoxybacillus
flavithermus WK1]
Length = 209
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 22/148 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP+ T+ +AL I+ +K I P++DD++++VG+V+D DL D S P +
Sbjct: 9 LKPSNTIADALNIVKQKNIRHLPIVDDEYRVVGIVTDRDL-----------RDAS--PSI 55
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++QK LS M +++T P+ +E+ A L E + +P+V +
Sbjct: 56 FHANEHLEDLQKPLSTI---MKTNVITGHPL-----DFVEEVAALFYEHRISCMPIV-KE 106
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
KLVGIIT +++ +Q+ A + G+Q
Sbjct: 107 NKLVGIITESDLLYTLVQLTGAHQPGSQ 134
>gi|363582867|ref|ZP_09315677.1| Inosine monophosphate dehydrogenase-related protein
[Flavobacteriaceae bacterium HQM9]
Length = 155
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Query: 76 AAPSSGV---YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A P G+ V D+MT K L P T+ + +E LV ITG PV+D+ L+G++
Sbjct: 11 AKPKKGMDAAIAVSDYMTKK--LISFSPQHTLLQTMETLVRNEITGGPVVDEKGTLIGMI 68
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
S+ D + S DS + FN N ++V M+ +
Sbjct: 69 SESDCMKQLS---------------DSRY--FN------MPMNTEIVEKYMSTIVETIDS 105
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ ++ +AA ++ Y+R PV++ +GKLVG I++ +++ AAL +
Sbjct: 106 SASIFEAAEQFYKSPYKRFPVLE-NGKLVGQISQHDIILAALHL 148
>gi|78184351|ref|YP_376786.1| CBS [Synechococcus sp. CC9902]
gi|78168645|gb|ABB25742.1| CBS [Synechococcus sp. CC9902]
Length = 157
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + + V+ T + EA++++ + ++G PV+D+ L+G +S+ DL+ +S
Sbjct: 6 TVADVMT--KPVLTVRADTPLQEAVKLISDHHVSGLPVVDEQGALIGELSEKDLMVRESG 63
Query: 144 SGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G VG+LM T +L A
Sbjct: 64 VDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GTTVGELMQKNSHSCDGTLDLPKA 117
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A +L +RL V+D + +G++TRG+VVRA
Sbjct: 118 ASMLHNKGTQRLFVLDNEKNPIGVLTRGDVVRA 150
>gi|408371984|ref|ZP_11169737.1| CBS domain-containing protein [Galbibacter sp. ck-I2-15]
gi|407742596|gb|EKF54190.1| CBS domain-containing protein [Galbibacter sp. ck-I2-15]
Length = 153
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 26/152 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT L +P ++ E +E+LV+ +I+G PV D LVG++S+ D + IS
Sbjct: 23 VSDYMT--RNLVTFRPEQSILEVMELLVKHKISGGPVCDQRGGLVGIISEAD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S R N P +D + V+K +S + D+ N+ DAA
Sbjct: 79 ES-RYFN--MPILDKS------VEKFMSTNVETIPSDM------------NIFDAASQFH 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
RRLPV+D GKLVG ++R +VV AAL++
Sbjct: 118 NGHRRRLPVLD-QGKLVGQLSRKDVVVAALKL 148
>gi|209544346|ref|YP_002276575.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532023|gb|ACI51960.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
Length = 236
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 88/153 (57%), Gaps = 14/153 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALD 141
V D MT+ V+ T ++ +A+ +++ R++ PV+ ++ LVG+V++ DL+ L+
Sbjct: 3 VRDIMTSPAV--CVESTRSLADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMRRSELE 60
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ SG G + +F S+ + +E ++G+ V D+M+ PV V T L DA
Sbjct: 61 TRSGHGWLGD-LF---RSSGRQASE----YVHSHGRKVFDIMSDQPVSVEPGTVLRDAVE 112
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+LL R LPVV+ + ++VG+++R +V+RA L
Sbjct: 113 VLLLRNIRHLPVVE-NNRVVGMVSRTDVLRALL 144
>gi|357636277|ref|ZP_09134152.1| CBS domain protein [Streptococcus macacae NCTC 11558]
gi|357584731|gb|EHJ51934.1| CBS domain protein [Streptococcus macacae NCTC 11558]
Length = 219
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM+ K + V P TTV +A +I+ EKR+ PVI++D KLVGLV++ +
Sbjct: 3 VKDFMSKK--VVYVSPDTTVAKATDIMREKRLRRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M + + + +LEDA L++
Sbjct: 53 --AEATPS-----KATSLSIYEMNYLLNKTK---IRDVMIHDVITISKDAHLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
K LPVVD + ++ GIIT ++ +A L++
Sbjct: 103 NHKIGVLPVVDEE-QISGIITDKDIFKAFLEV 133
>gi|326333121|ref|ZP_08199370.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
gi|325949104|gb|EGD41195.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
Length = 499
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 28/135 (20%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ ++ E RI+GFPV+D D KL+G++++ DL F V
Sbjct: 103 IGPDATLEQLDKLAGEYRISGFPVVDVDQKLIGIITNRDL---------------RFTPV 147
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ W T + + SK DL+T + R E+A +LL + K RLP+VD D
Sbjct: 148 -AEWATTKVNEVMTSK-------DLITGPAEISR-----EEATKLLRQHKLERLPLVDTD 194
Query: 218 GKLVGIITRGNVVRA 232
G++ G+IT + V++
Sbjct: 195 GRITGLITVKDFVKS 209
>gi|390935988|ref|YP_006393547.1| putative transporter [Bifidobacterium bifidum BGN4]
gi|389889601|gb|AFL03668.1| putative transporter [Bifidobacterium bifidum BGN4]
Length = 683
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 99 KPTTTVDEA-----LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
+P + +D A + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSADITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 154 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 212 PVVDADGKLVGIITRGNVVRAAL 234
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSADITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 MKS 582
>gi|433443625|ref|ZP_20408925.1| acetoin utilization protein [Anoxybacillus flavithermus TNO-09.006]
gi|432002019|gb|ELK22881.1| acetoin utilization protein [Anoxybacillus flavithermus TNO-09.006]
Length = 214
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 22/154 (14%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
K ++ +KP+ T+ +AL I+ +K I P++DD++++VG+V+D DL D
Sbjct: 8 KTDVIALKPSNTIADALNIVKQKNIRHLPIVDDEYRVVGIVTDRDL-----------RDA 56
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
S P + + ++QK LS M +++T P+ +E+ A L E + +
Sbjct: 57 S--PSIFHANEHLEDLQKPLSTI---MKTNVITGHPL-----DFVEEVAALFYEHRISCM 106
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
P+V + KLVGIIT +++ +Q+ A + G+Q
Sbjct: 107 PIV-KENKLVGIITESDLLYTLVQLTGAHQPGSQ 139
>gi|319939590|ref|ZP_08013949.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
gi|335032128|ref|ZP_08525535.1| CBS domain protein [Streptococcus anginosus SK52 = DSM 20563]
gi|319811179|gb|EFW07485.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
gi|333767799|gb|EGL45022.1| CBS domain protein [Streptococcus anginosus SK52 = DSM 20563]
Length = 218
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|294633519|ref|ZP_06712078.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831300|gb|EFF89650.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 217
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V+ T+ + + L + ++ PV+DD + VGLVS+ DLL
Sbjct: 5 TVEDLMT--HAVVRVRRDTSFKDLVRTLADNGVSAVPVVDDLGRPVGLVSEADLLR---- 58
Query: 144 SGSGRADNSMF---PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ +GR D + P D +E G+LMT PV R ++ +AA
Sbjct: 59 TVAGRPDPAGLLAEPRRDGVLGQASE---------EATAGELMTAPPVCARPGWSVVEAA 109
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
R + +RLPVVD G LVGI++R +++R L+ A
Sbjct: 110 RTMDAHTVKRLPVVDETGVLVGIVSRADLLRVFLRRDEA 148
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 175 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+ + V DLMT A V VR T+ +D R L + +PVVD G+ VG+++ +++R
Sbjct: 2 HHRTVEDLMTHAVVRVRRDTSFKDLVRTLADNGVSAVPVVDDLGRPVGLVSEADLLR 58
>gi|310286641|ref|YP_003937899.1| multidrug resistance transporter [Bifidobacterium bifidum S17]
gi|309250577|gb|ADO52325.1| multidrug resistance transporter, Major Facilitator Superfamily
[Bifidobacterium bifidum S17]
Length = 683
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 MKS 582
>gi|154487114|ref|ZP_02028521.1| hypothetical protein BIFADO_00954 [Bifidobacterium adolescentis
L2-32]
gi|154084977|gb|EDN84022.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium adolescentis L2-32]
Length = 692
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 618 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 677
Query: 229 VVRAAL 234
V+ A
Sbjct: 678 VMEHAF 683
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L +T + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQTQEQSIGGIMDDHPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 230 VRA 232
+++
Sbjct: 589 MKS 591
>gi|75675216|ref|YP_317637.1| hypothetical protein Nwi_1023 [Nitrobacter winogradskyi Nb-255]
gi|74420086|gb|ABA04285.1| IMP dehydrogenase [Nitrobacter winogradskyi Nb-255]
Length = 243
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 147
MT K L VK T + EA ++++E I+G PV+DD +L+G+VS+ D + I G
Sbjct: 6 IMTHK--LITVKADTPIVEAAKLMLESHISGLPVVDDAGRLLGIVSESDFMRRSEIGTHG 63
Query: 148 RADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARL 202
P + W F + + +G+ V +MT + E LE+ RL
Sbjct: 64 -------PRI--RWLDFLMGTEKAAIDFVREHGRKVSAIMTRETLFTATEDMPLEELVRL 114
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +RLPV+ D LVGI+TR +++RA
Sbjct: 115 MERQNIKRLPVIRGD-LLVGIVTRADLLRA 143
>gi|311063535|ref|YP_003970260.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
gi|310865854|gb|ADP35223.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
Length = 683
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 MKS 582
>gi|268679127|ref|YP_003303558.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
DSM 6946]
gi|268617158|gb|ACZ11523.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
DSM 6946]
Length = 482
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K T+ +AL I+ E RI+G PV+DD L+G++++ DL R +N
Sbjct: 99 IKAHATLRDALAIMSEYRISGVPVVDDSNTLIGILTNRDL----------RFEN------ 142
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
D T K V +LMT P++ V++ T L+DA + K +LPVVD
Sbjct: 143 DYT----------------KNVEELMTKMPLITVKKGTTLDDAEAIFRTNKVEKLPVVDE 186
Query: 217 DGKLVGIIT 225
D KL G+IT
Sbjct: 187 DNKLSGLIT 195
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK L VK TT+D+A I ++ PV+D+D KL GL++ DL
Sbjct: 151 LMTKMPLITVKKGTTLDDAEAIFRTNKVEKLPVVDEDNKLSGLITIKDL 199
>gi|414173939|ref|ZP_11428566.1| hypothetical protein HMPREF9695_02212 [Afipia broomeae ATCC 49717]
gi|410890573|gb|EKS38372.1| hypothetical protein HMPREF9695_02212 [Afipia broomeae ATCC 49717]
Length = 241
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 31/148 (20%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P ++ +A ++++ ++G PV+D LVG+V++ DLL LD I
Sbjct: 14 VAPGDSITDAARLMLDNHLSGLPVVDLKGALVGIVTERDLLRRREIGTQRNRPRWLDFIL 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + + VQ T G+ V ++MT V E T L D ++
Sbjct: 74 GPGR-------------QAADYVQ-----TAGRRVDEIMTRDVQTVTEDTPLSDVVAIME 115
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +R+PV++++ KL GII+R N VRA
Sbjct: 116 RYRIKRVPVMNSNNKLTGIISRQNFVRA 143
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT + V ++ DAARL+L+ LPVVD G LVGI+T +++R
Sbjct: 6 IMTRKVIKVAPGDSITDAARLMLDNHLSGLPVVDLKGALVGIVTERDLLR 55
>gi|150008997|ref|YP_001303740.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
ATCC 8503]
gi|255014828|ref|ZP_05286954.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_7]
gi|256841002|ref|ZP_05546509.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
gi|262383887|ref|ZP_06077023.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
gi|298375771|ref|ZP_06985727.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
gi|301312047|ref|ZP_07217969.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
gi|410102763|ref|ZP_11297688.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D25]
gi|423330258|ref|ZP_17308042.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|423339398|ref|ZP_17317139.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|149937421|gb|ABR44118.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
ATCC 8503]
gi|256736845|gb|EEU50172.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
gi|262294785|gb|EEY82717.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
gi|298266808|gb|EFI08465.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
gi|300830149|gb|EFK60797.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
gi|409230779|gb|EKN23640.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|409231874|gb|EKN24722.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|409237890|gb|EKN30685.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D25]
Length = 491
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 31/129 (24%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V +AL ++ E +I G PV+D+ LVG+V++ DL R + M +D
Sbjct: 110 VADALAMMAEYKIGGIPVVDEGGYLVGIVTNRDL----------RFEKDMNRSID----- 154
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
++++K N VV ++T++E AA++L E K +LPVVD+ KL+G+
Sbjct: 155 -----EVMTKEN-----------LVVTGQSTDMEAAAQILQEHKIEKLPVVDSHNKLIGL 198
Query: 224 ITRGNVVRA 232
IT ++ +A
Sbjct: 199 ITYKDITKA 207
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L V +T ++ A +IL E +I PV+D KL+GL++ D+
Sbjct: 154 DEVMTKENLVVTGQSTDMEAAAQILQEHKIEKLPVVDSHNKLIGLITYKDI 204
>gi|23465493|ref|NP_696096.1| efflux transporter protein [Bifidobacterium longum NCC2705]
gi|322688919|ref|YP_004208653.1| transport protein [Bifidobacterium longum subsp. infantis 157F]
gi|23326150|gb|AAN24732.1| possible efflux transporter protein [Bifidobacterium longum
NCC2705]
gi|320460255|dbj|BAJ70875.1| putative transport protein [Bifidobacterium longum subsp. infantis
157F]
Length = 683
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|281412866|ref|YP_003346945.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga naphthophila RKU-10]
gi|281373969|gb|ADA67531.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga naphthophila RKU-10]
Length = 321
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 29/133 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D+
Sbjct: 29 VTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDS------ 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V+K MT V ++ET L+DA ++ + Y R PVVD +
Sbjct: 81 ---------VEK------------RMTKNVVCLKETDTLQDAVKIFEKYGYGRFPVVDDE 119
Query: 218 GKLVGIITRGNVV 230
KLVGI+T+ +++
Sbjct: 120 EKLVGIVTKHDII 132
>gi|344940460|ref|ZP_08779748.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
gi|344261652|gb|EGW21923.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
Length = 386
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV+ T V+EA +I+ ++++ PVID +++G+++ D ++S +
Sbjct: 246 VVEYGTEVEEAWKIMHKQKLKAMPVIDRARRVIGIITWNDFFKFINLSA--------YES 297
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++ F +S + VG +MT + V+ E+ ++ D L+ YR++P+V++
Sbjct: 298 FQDRFRAFIRRTPDVSTDKPESVGHMMTTSVTVLPESAHIADLISLMSTQGYRQIPIVNS 357
Query: 217 DGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ +LVG++ + N++ AAL + + + +Q
Sbjct: 358 ENRLVGMVYQANLI-AALYDEQLSSVASQ 385
>gi|332158567|ref|YP_004423846.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
gi|331034030|gb|AEC51842.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
Length = 485
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 35/138 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P T+D AL ++ + I G PV++ D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEGD-RVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G+ V +LMT + V E+ ++E+A ++++E + RLP
Sbjct: 149 -----------------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLP 185
Query: 213 VVDADGKLVGIITRGNVV 230
VV+ DGKLVG+IT ++V
Sbjct: 186 VVNEDGKLVGLITMSDLV 203
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G TV + MT E+ V + V+EAL+I++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREG-RTVKELMT--REVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 129 VGLVSDYDLLA 139
VGL++ DL+A
Sbjct: 194 VGLITMSDLVA 204
>gi|390565046|ref|ZP_10245762.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390171708|emb|CCF85092.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 271
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 24 SGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVY 83
+GR +L L + G RV +++ RV LR + L + +G
Sbjct: 75 AGRLMAEQRLNPLPVVDAGGRVVGIIS----RVDVLRTVTEPGLGIGLVEPVGSVETGAG 130
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG M+ ++ V + + L L R V+D + + +G+++D +LL
Sbjct: 131 TVGAVMS--RQVPAVGADAGLGDVLAALASSRQNRVVVVDGERRPIGVITDAELLR---- 184
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKT---NGKMVGDLMTPAPVVVRETTNLEDAA 200
R + + P + ++KL + NG DLM P VR T + +A
Sbjct: 185 ----RVEPAAQPGLAQVL-----MRKLGHREVVPNGARAVDLMLPRGETVRAETPVGEAI 235
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
RL+LE Y+ LPVVDA+G+LVG++ R +++RA
Sbjct: 236 RLMLERAYKILPVVDAEGRLVGLVDRADLLRA 267
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178
PV++ + +LVGLV+ DL+ G R + P +D + L +
Sbjct: 1 MPVVNREGRLVGLVTRGDLIE----RGGLRLRVELLPALDGA--AVERELRRLELESPMT 54
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
DLMT V VR T+L A RL+ E + LPVVDA G++VGII+R +V+R
Sbjct: 55 AADLMTRDVVTVRPETSLAAAGRLMAEQRLNPLPVVDAGGRVVGIISRVDVLR 107
>gi|423343079|ref|ZP_17320793.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides johnsonii
CL02T12C29]
gi|409216755|gb|EKN09738.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides johnsonii
CL02T12C29]
Length = 491
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 31/130 (23%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +AL ++ E +I G PV+D+ LVG+V++ DL R + M VD
Sbjct: 109 TVGDALGMMKEYKIGGIPVVDESDHLVGIVTNRDL----------RFERDMNRSVD---- 154
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
++++K N +V ++T+LE AA +L + K +LPVVD+ +LVG
Sbjct: 155 ------EVMTKEN-----------LIVADQSTDLEAAASILQQHKIEKLPVVDSQNRLVG 197
Query: 223 IITRGNVVRA 232
+IT ++ RA
Sbjct: 198 LITYKDITRA 207
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L V +T ++ A IL + +I PV+D +LVGL++ D+
Sbjct: 154 DEVMTKENLIVADQSTDLEAAASILQQHKIEKLPVVDSQNRLVGLITYKDI 204
>gi|313139333|ref|ZP_07801526.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313131843|gb|EFR49460.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 692
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 618 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 677
Query: 229 VVRAAL 234
V+ A
Sbjct: 678 VMEHAF 683
>gi|301064753|ref|ZP_07205133.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300441128|gb|EFK05513.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 431
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M + + H V P T V E L I+ + I V+D D +L+GL+SD LL+ S
Sbjct: 279 VSDIM--RRDTHTVTPDTPVHEVLTIIDDNDIQRVAVVDSDGRLLGLISDRTLLSAFSEK 336
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD-----LMTPAPVVVRETTNLEDA 199
G EV S F+ K K+ GD +M + VRE T+++ A
Sbjct: 337 APG------VWEVLSKLSPFSAKPKHTGNVREKL-GDQPAKAVMKTDLITVREDTDIDQA 389
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
L+ E +RLPVVD G G+I+R +++
Sbjct: 390 IALMTEHGIKRLPVVDDQGMFKGMISREALLKQGF 424
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS----ISGSGRADNSMFPEVDST 160
D+ ++ L+ R TG PV+D + + VG+VS DL+ ++ ++D+ V
Sbjct: 137 DQVMKALLSARFTGLPVVDSENRPVGVVSQSDLIYRAGMPVRLALMAQSDHERLKTV--- 193
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
V+ L +KT D+MT V ++E L A +++ K +RLPVV+ +G L
Sbjct: 194 ------VKGLAAKT----AQDIMTGPAVTIQENDPLTRAVTAMVKNKVKRLPVVNGEGFL 243
Query: 221 VGIITRGNVVR 231
GI++R +V +
Sbjct: 244 TGIVSRLDVFQ 254
>gi|326792093|ref|YP_004309914.1| hypothetical protein Clole_3019 [Clostridium lentocellum DSM 5427]
gi|326542857|gb|ADZ84716.1| CBS domain containing membrane protein [Clostridium lentocellum DSM
5427]
Length = 150
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ +++ + IL++ +I+G PV+D++ +LVG+VS+ DL+ + G +S +
Sbjct: 14 VRNEELLEDIINILMKHQISGVPVVDENNQLVGVVSEKDLMTKEK----GLNISSYIAFM 69
Query: 158 DSTW-----KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
S K E + +L T K V + TPA V E T +E+ L++ R+P
Sbjct: 70 TSILGIDGKKQLGESRAILQTTTAKEV--MSTPAFAVHEEAT-IEEVVSLMMNRHINRIP 126
Query: 213 VVDADGKLVGIITR 226
V++ D KLVGII R
Sbjct: 127 VINEDNKLVGIIGR 140
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
V T++E + +++ + I PVI++D KLVG++ DLL L
Sbjct: 104 VHEEATIEEVVSLMMNRHINRIPVINEDNKLVGIIGRTDLLPL 146
>gi|448426713|ref|ZP_21583486.1| peptidase M50 [Halorubrum terrestre JCM 10247]
gi|445679200|gb|ELZ31671.1| peptidase M50 [Halorubrum terrestre JCM 10247]
Length = 394
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + +LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRGDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVDADG+LVG+I+R +++ A
Sbjct: 339 QEHGVGRLPVVDADGELVGLISRSDLMTA 367
>gi|227545976|ref|ZP_03976025.1| efflux transporter protein [Bifidobacterium longum subsp. longum
ATCC 55813]
gi|227213610|gb|EEI81459.1| efflux transporter protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 683
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|163848024|ref|YP_001636068.1| hypothetical protein Caur_2472 [Chloroflexus aurantiacus J-10-fl]
gi|222525911|ref|YP_002570382.1| hypothetical protein Chy400_2666 [Chloroflexus sp. Y-400-fl]
gi|163669313|gb|ABY35679.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222449790|gb|ACM54056.1| CBS domain containing membrane protein [Chloroflexus sp. Y-400-fl]
Length = 435
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T+V E + +L+E+ + PV+D + +++G+V+D DLL +S + P +
Sbjct: 135 TSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQ-RGVSQLPLHLQQLLPGAERAA 193
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
+ + D+MTP P + T +L AA L+ E ++RLPVVD G+LV
Sbjct: 194 HLAAVAAR------PERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVVDEAGRLV 247
Query: 222 GIITRGNVVR 231
G+++R ++++
Sbjct: 248 GMLSRSDLLQ 257
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 29/168 (17%)
Query: 73 ANSAAPSSGVY---------TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID 123
AN+ A SS V TVG+ M ++ V P T + E L+ ++ V+D
Sbjct: 260 ANTFASSSEVLPGSILTTAKTVGEVMI--RDVPTVTPETPLAETLDRILSTPRRRVVVVD 317
Query: 124 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF-------NEVQKLLSKTNG 176
+ ++VG++SD D+L RA + P + + + E++ L
Sbjct: 318 QNRRVVGIISDGDILR--------RAARPVAPGLLQRFAVWIGGGARPPELELALKNLTA 369
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
V MT + V T + A L++E + +RLPVVD +G+LVG++
Sbjct: 370 AAV---MTSPVLTVNPDTPIISAVELMIERRIKRLPVVDEEGRLVGMV 414
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
V D+M + V T++ + RLLLE R +PVVDA+ +++GI+T ++++
Sbjct: 120 VADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQ 172
>gi|347735918|ref|ZP_08868687.1| hypothetical protein AZA_88447 [Azospirillum amazonense Y2]
gi|346920740|gb|EGY01722.1| hypothetical protein AZA_88447 [Azospirillum amazonense Y2]
Length = 272
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 23/150 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDD-------WKLVGLVSDYDLLALDSISGSGRAD 150
V+P T + +AL ++V RI+G PV++DD ++VG++++ DL+ RA+
Sbjct: 37 VRPDTPLVDALRLMVRNRISGLPVVEDDVAAEGGGCRVVGVLTEGDLMR--------RAE 88
Query: 151 NSMFPEVDSTW-----KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
EV W T + SK +G+ V ++MT + V ++ A L+
Sbjct: 89 TGT--EVHDRWWQRMFTTPGDQADQYSKMHGRRVAEVMTRDVLTVDVDDDIATAVALMDG 146
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
K +RLPV+ A G L G+I+R +VVRA L
Sbjct: 147 RKVKRLPVL-AHGHLAGVISRADVVRALLH 175
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD-------GKLVGIITRGNVVR 231
V +MTP + VR T L DA RL++ + LPVV+ D ++VG++T G+++R
Sbjct: 26 VRQIMTPGVLTVRPDTPLVDALRLMVRNRISGLPVVEDDVAAEGGGCRVVGVLTEGDLMR 85
Query: 232 AA 233
A
Sbjct: 86 RA 87
>gi|213692518|ref|YP_002323104.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|384199715|ref|YP_005585458.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|213523979|gb|ACJ52726.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|320458667|dbj|BAJ69288.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
Length = 683
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVT 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|359400359|ref|ZP_09193343.1| hypothetical protein NSU_3029 [Novosphingobium pentaromativorans
US6-1]
gi|357598219|gb|EHJ59953.1| hypothetical protein NSU_3029 [Novosphingobium pentaromativorans
US6-1]
Length = 237
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+V E +L+E+ I+ PVI D +L G+VS+ DLL R ++ P
Sbjct: 15 VTPETSVPEVARLLLERHISAVPVIGSDGQLAGIVSEGDLLR--------RTEDGSHPHG 66
Query: 158 DSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ F++ + K G+ D+MT V V E + A LL + +R+PV+
Sbjct: 67 SWWLRHFSKRGASAADYVKARGRFAADVMTRDVVTVTEEALSSEVAHLLESRRIKRVPVL 126
Query: 215 DADGKLVGIITRGNVVRA 232
D K+VGI++R +++R
Sbjct: 127 RED-KVVGIVSRADLIRG 143
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR---------A 232
+MT + V V T++ + ARLLLE +PV+ +DG+L GI++ G+++R
Sbjct: 7 IMTTSVVSVTPETSVPEVARLLLERHISAVPVIGSDGQLAGIVSEGDLLRRTEDGSHPHG 66
Query: 233 ALQIKHATEMGA 244
+ ++H ++ GA
Sbjct: 67 SWWLRHFSKRGA 78
>gi|46581178|ref|YP_011986.1| hypothetical protein DVU2774 [Desulfovibrio vulgaris str.
Hildenborough]
gi|387154408|ref|YP_005703344.1| hypothetical protein Deval_2564 [Desulfovibrio vulgaris RCH1]
gi|46450599|gb|AAS97246.1| CBS domain protein/ACT domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234852|gb|ADP87706.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
RCH1]
Length = 227
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A +++ E PV+D + KL+G+VSD D+ A S +
Sbjct: 14 VTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDI---------KEASPSKATTL 64
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D +E+ LLS+ V D+MT P+ V+ +E A L++E +PVVD +
Sbjct: 65 D-----MHELYYLLSEIK---VKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEE 116
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
G+LVGIIT ++ + + I G Q
Sbjct: 117 GQLVGIITDSDIFKVLIAITGVRSGGVQ 144
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ + MT + V T++ A++L+ E +RRLPV+D +GKL+GI++ ++ A+
Sbjct: 2 LIREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEAS 57
>gi|421733867|ref|ZP_16172962.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
gi|407078240|gb|EKE51051.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
Length = 618
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 488 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 543
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 544 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 603
Query: 229 VVRAAL 234
V+ A
Sbjct: 604 VMEHAF 609
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 455 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 514
Query: 230 VRA 232
+++
Sbjct: 515 MKS 517
>gi|384201729|ref|YP_005587476.1| transporter [Bifidobacterium longum subsp. longum KACC 91563]
gi|338754736|gb|AEI97725.1| transport protein [Bifidobacterium longum subsp. longum KACC 91563]
Length = 683
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|20095036|ref|NP_614883.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
gi|19888306|gb|AAM02813.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
Length = 502
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 30/133 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P +V A+E++ + + G PV+D++ K+VG+++ R D + E
Sbjct: 107 ISPDESVKRAVELMEKHDVGGLPVVDEEGKVVGIIT--------------RRDVGLLSE- 151
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA-RLLLETKYRRLPVVDA 216
E+ +L K+ +MT PVV+ E +LE+ A R++ E K R+PVVD
Sbjct: 152 -------EEIGELDVKS-------VMTEEPVVIEEGEDLEERALRVMREEKIERVPVVDD 197
Query: 217 DGKLVGIITRGNV 229
+G+L+GI+T +V
Sbjct: 198 EGRLLGIVTAKDV 210
>gi|225352807|ref|ZP_03743830.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156414|gb|EEG69983.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 692
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE-VDSTWKTFNE--V 167
+ ++ PV++ D +LVG VSD D+L ++ P ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVL-----KAIATYESRTVPTGTGSTMVVFDDETV 616
Query: 168 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 227
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R
Sbjct: 617 ASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRK 676
Query: 228 NVVRAAL 234
+V+ A
Sbjct: 677 SVMEHAF 683
>gi|305665510|ref|YP_003861797.1| CBS domain-containing protein [Maribacter sp. HTCC2170]
gi|88710266|gb|EAR02498.1| CBS domain protein [Maribacter sp. HTCC2170]
Length = 154
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 26/152 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+TK L P ++ E +E + I+G PV+DD+ LVG++S+ D + IS
Sbjct: 23 VSDYMSTK--LVTFAPEQSILEVMEQFAKHHISGGPVLDDNGFLVGIISEAD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN Q +L K+ V MT + ++ DAA +
Sbjct: 79 ES---------------RYFN--QPILDKS----VEKYMTKGVETIPHDISIFDAAGIFD 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ RRLPV+ DG LVG I+R +VV AAL++
Sbjct: 118 KHNRRRLPVM-KDGLLVGQISRKDVVIAALKL 148
>gi|108803646|ref|YP_643583.1| signal transduction protein [Rubrobacter xylanophilus DSM 9941]
gi|108764889|gb|ABG03771.1| putative signal transduction protein with CBS domains [Rubrobacter
xylanophilus DSM 9941]
Length = 160
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS- 142
TVGD M + + P TV+ A+ + E I+G PV++D +LVG+V++ DL+ D+
Sbjct: 10 TVGDVMHA--DWPTLGPEDTVERAIRLFAESHISGAPVLEDG-RLVGIVTEGDLIFRDAE 66
Query: 143 ISGSGRAD--NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
I G D + P +W+ + E + L K+ G VG++MT V V T L +AA
Sbjct: 67 IKAPGFLDILGGIIPL--GSWEEYRE-ETL--KSAGVTVGEVMTRDVVTVSPQTPLPEAA 121
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+ + + LPVV+ + L G+I+R +++
Sbjct: 122 TAMARRRIKLLPVVEGERLLRGVISRMDIL 151
>gi|386844837|ref|YP_006249895.1| transport protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374105138|gb|AEY94022.1| putative transport protein [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798127|gb|AGF68176.1| putative transport protein [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 224
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMFPEVDS 159
T E + +L E +T PV+D+ + +G+VS+ DLL + D SGR + P +++
Sbjct: 21 TPFKELVRLLEENGVTAVPVVDELDRPLGVVSEADLLRKSADQADPSGR---TPIPHLEA 77
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
W+ +K G +LM+ V R + +AARL+ +RLPVVD +
Sbjct: 78 -WER--------AKAEGSRAEELMSAPAVCARPEWTVVEAARLMETQNVKRLPVVDETDR 128
Query: 220 LVGIITRGNVVRAALQIKHA 239
L+GI++RG+++R L+ A
Sbjct: 129 LLGIVSRGDLLRVFLRRDEA 148
>gi|337748935|ref|YP_004643097.1| hypothetical protein KNP414_04697 [Paenibacillus mucilaginosus
KNP414]
gi|336300124|gb|AEI43227.1| CBS domain-containing protein [Paenibacillus mucilaginosus KNP414]
Length = 152
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%), Gaps = 15/147 (10%)
Query: 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154
++ V T +V + + +E RI+G PV++ K+VG +SD D++ GR ++ +
Sbjct: 12 VYCVNETESVRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEY-----IGRHEDRV- 65
Query: 155 PEVDSTWKTF----NE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
V S + TF +E + +S+ V D+ T + V+ +E+ A +L + +
Sbjct: 66 --VGSLFFTFVFRGDEFGFDERISRILDLPVMDIATKKVITVQAEEPMENIAAILAQRQI 123
Query: 209 RRLPVVDADGKLVGIITRGNVVRAALQ 235
++LP V+ G+LVGII+RG+V+R + +
Sbjct: 124 KKLP-VEQHGELVGIISRGDVIRHSFK 149
>gi|297560079|ref|YP_003679053.1| hypothetical protein Ndas_1105 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844527|gb|ADH66547.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 228
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TV D MTT E+ V T E E+LV ++ PV + + +VG+VSD DLL +
Sbjct: 1 MHTVSDVMTT--EVFSVTGDTGYREIAEMLVTHGVSALPVTNGEGCVVGVVSDEDLLHKE 58
Query: 142 SISGSGRADNSMFPEVDSTWKT-FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+G A P + + + K + +LMT V V ++ AA
Sbjct: 59 EFTGGDYA-----PPLRARLRARLGSGGSAGDKATARNAAELMTGPAVTVSSDASVVLAA 113
Query: 201 RLLLETKYRRLPVVDADGKLVGIITR 226
RL+ ++LPVVD DG L+GI++R
Sbjct: 114 RLMERHGVKQLPVVDGDGHLLGIVSR 139
>gi|33865304|ref|NP_896863.1| IMP dehydrogenase [Synechococcus sp. WH 8102]
gi|33632473|emb|CAE07285.1| similar to IMP dehydrogenase [Synechococcus sp. WH 8102]
Length = 147
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSM 153
V P T + +A++++ + I+G PV+DD L+G +S+ D + +S +G D+ +
Sbjct: 8 VTPDTPLQQAVQLISDHHISGLPVVDDAGVLIGELSEQDQMVRESGVDAGPYVMLLDSVI 67
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W +V ++L G V DLM L AA L + +RL V
Sbjct: 68 YLRNPLNWD--KQVHQVL----GTTVKDLMRKDTHTCSLELGLPKAASQLHDRSTQRLFV 121
Query: 214 VDADGKLVGIITRGNVVRA 232
+D DGK G+ITRG+V+RA
Sbjct: 122 LDGDGKPAGVITRGDVMRA 140
>gi|418962567|ref|ZP_13514423.1| CBS domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383345356|gb|EID23482.1| CBS domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 218
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|336323149|ref|YP_004603116.1| hypothetical protein Flexsi_0886 [Flexistipes sinusarabici DSM
4947]
gi|336106730|gb|AEI14548.1| CBS domain containing membrane protein [Flexistipes sinusarabici
DSM 4947]
Length = 140
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 20/124 (16%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV--DSTWKTFNEVQ 168
L +K +TG PV++ D ++VG+ S+ D+L + P++ D+ +VQ
Sbjct: 29 LRKKNLTGLPVLNKDGEVVGVFSESDVL-------------NQLPDILNDADKIPLVDVQ 75
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+L + V ++M P+ V NL+D A++ LE R+PVVD +GKLVGI++ G+
Sbjct: 76 ELTNPP----VKNVMGKPPITVTPEHNLKDVAKIFLENYIHRVPVVD-NGKLVGIVSLGD 130
Query: 229 VVRA 232
+++A
Sbjct: 131 LLKA 134
>gi|288920574|ref|ZP_06414879.1| CBS domain containing membrane protein [Frankia sp. EUN1f]
gi|288347995|gb|EFC82267.1| CBS domain containing membrane protein [Frankia sp. EUN1f]
Length = 216
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
G+ MT K L +V P V + +L + I PV+ +LVG+V++ D +AL++
Sbjct: 4 GELMTRK--LSIVTPDVPVKDVARLLALRGIGAVPVVSAQGELVGIVTEADFIALEA--- 58
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
R D+ + D + VG+LM+ V R T++ D ++L
Sbjct: 59 --RPDSRLHARRDRNPRPAAP----------GTVGELMSSPVVTARVDTDIADIVGVMLA 106
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVR 231
R+P++D G LVGII+R +++R
Sbjct: 107 QHISRVPILDEAGMLVGIISRSDLLR 132
>gi|253699582|ref|YP_003020771.1| hypothetical protein GM21_0947 [Geobacter sp. M21]
gi|251774432|gb|ACT17013.1| CBS domain containing protein [Geobacter sp. M21]
Length = 216
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P +V EAL ++ +K+I PV++ + KLVG+VSD DL + A
Sbjct: 14 ITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQASPSPATSLA-------- 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W E+ LL+K V M + V E T LE+AAR++++ + LPV+ D
Sbjct: 66 --IW----EIHDLLAKLT---VDKTMAKDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD 116
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
LVGIIT ++ +A L++ G +
Sbjct: 117 A-LVGIITESDLFQALLELLGGRRQGVR 143
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MTP P+ + ++ +A RL+ + K RRLPVV+ +GKLVGI++ ++ +A+
Sbjct: 2 LVRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQAS 57
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 75 SAAPSSGVYTVGDFM-------TTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
S A S ++ + D + T +++ V T ++EA ++V++RI G PV+ D
Sbjct: 59 SPATSLAIWEIHDLLAKLTVDKTMAKDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD-A 117
Query: 128 LVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
LVG++++ DL AL + G R + T +V + + + G +VG
Sbjct: 118 LVGIITESDLFQALLELLGGRRQGVRLTVTTTGAKGTLADVAQTIYEAGGDIVG 171
>gi|294496136|ref|YP_003542629.1| hypothetical protein Mmah_1488 [Methanohalophilus mahii DSM 5219]
gi|292667135|gb|ADE36984.1| CBS domain containing protein [Methanohalophilus mahii DSM 5219]
Length = 285
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 36/134 (26%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
DE L IL +K+++G PV+ D+ ++VG+VS
Sbjct: 25 DEVLNILKDKKVSGVPVLKDN-RVVGIVSR------------------------------ 53
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
LLS + + LMT P+ ++ N++ AA+ L+E +RRLPVVD D KL G+I
Sbjct: 54 ---SNLLSNPEEEQIALLMTRDPLKIKPEDNIKKAAQYLMEYGFRRLPVVDDDDKLEGMI 110
Query: 225 TRGNVV--RAALQI 236
T ++V A+LQ+
Sbjct: 111 TVADIVASMASLQL 124
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 49 LATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHV----------V 98
L S D V + + V L N G+ + + ++ EE + +
Sbjct: 20 LPGSRDEVLNILKDKKVSGVPVLKDNRVV---GIVSRSNLLSNPEEEQIALLMTRDPLKI 76
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
KP + +A + L+E PV+DDD KL G+++ D++A SM
Sbjct: 77 KPEDNIKKAAQYLMEYGFRRLPVVDDDDKLEGMITVADIVA------------SM----- 119
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLM--TPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++ + + + K L + K +G + TP P+V R N+E A + +P++++
Sbjct: 120 ASLQLDDPISKYLGR---KGIGPVWCETPLPLVAR---NMELA-------HIKAVPILNS 166
Query: 217 DGKLVGIITRGNVVRAALQIKHATEM 242
+ LVGII+ +++ A++ I+ + EM
Sbjct: 167 ELDLVGIISDRDIISASV-IEDSLEM 191
>gi|379721903|ref|YP_005314034.1| hypothetical protein PM3016_4103 [Paenibacillus mucilaginosus 3016]
gi|378570575|gb|AFC30885.1| CBS domain-containing protein [Paenibacillus mucilaginosus 3016]
Length = 152
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%), Gaps = 15/147 (10%)
Query: 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154
++ V T +V + + +E RI+G PV++ K+VG +SD D++ GR ++ +
Sbjct: 12 VYCVNETDSVRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEY-----IGRHEDRV- 65
Query: 155 PEVDSTWKTF----NE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
V S + TF +E + +S+ V D+ T + V+ +E+ A +L + +
Sbjct: 66 --VGSLFFTFVFRGDEFGFDERISRILDLPVMDIATKKVITVQAEEPMENVAAILAQRQI 123
Query: 209 RRLPVVDADGKLVGIITRGNVVRAALQ 235
++LP V+ G+LVGII+RG+V+R + +
Sbjct: 124 KKLP-VEQHGELVGIISRGDVIRHSFK 149
>gi|326781239|ref|ZP_08240504.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
gi|326661572|gb|EGE46418.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
Length = 207
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TV D M+ V + + +E++ E +++ PV+ + ++VG+VS+ DLL ++
Sbjct: 6 HTVSDVMSHTPV--AVGSHASYRQVVELMSESKVSALPVLAGEGRVVGVVSEADLLPKEA 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + ++D +K +V DLM+ V V + +AAR+
Sbjct: 64 FREGGPPAAA---QLDEAFKA-----------AAVLVEDLMSSPAVTVHPDAPIAEAARI 109
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLPVV+++G L G+++RG++++ L+
Sbjct: 110 MARKHVKRLPVVNSEGLLEGVVSRGDLLKVFLR 142
>gi|307104771|gb|EFN53023.1| hypothetical protein CHLNCDRAFT_59753 [Chlorella variabilis]
Length = 209
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 35/120 (29%)
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I G PV+D D KLVG+VS DL
Sbjct: 109 IEGMPVVDGDNKLVGVVSRKDL-----------------------------------AKG 133
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
G +V D+M+ PV ++ + + DAA ++++ K+ R+PVVD D VGI+TR ++ A Q
Sbjct: 134 GALVQDIMSSTPVSLKASGKVADAAEIMIKHKFHRVPVVDDDNTCVGIVTRSDIFWALTQ 193
>gi|418965274|ref|ZP_13517052.1| CBS domain protein [Streptococcus constellatus subsp. constellatus
SK53]
gi|383342869|gb|EID21070.1| CBS domain protein [Streptococcus constellatus subsp. constellatus
SK53]
Length = 218
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|212716979|ref|ZP_03325107.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660264|gb|EEB20839.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 692
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE-VDSTWKTFNE--V 167
+ ++ PV++ D +LVG VSD D++ SI+ ++ P ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIA---TYESRTVPTGTGSTMVVFDDETV 616
Query: 168 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 227
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R
Sbjct: 617 ASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRK 676
Query: 228 NVVRAAL 234
+V+ A
Sbjct: 677 SVMEHAF 683
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 230 VRA 232
+++
Sbjct: 589 MKS 591
>gi|335029500|ref|ZP_08523007.1| CBS domain protein [Streptococcus infantis SK1076]
gi|334268797|gb|EGL87229.1| CBS domain protein [Streptococcus infantis SK1076]
Length = 218
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD D +L G+IT +V A L+I E G
Sbjct: 103 KNKIGILPVVDND-QLYGVITDRDVFGAFLEIAGYGEEG 140
>gi|456352174|dbj|BAM86619.1| hypothetical protein S58_06050 [Agromonas oligotrophica S58]
Length = 239
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T V EA I++ I G PV+D +LVG+V+D D L + R
Sbjct: 4 VTPGTPVAEAARIMLRNHIGGLPVVDASGRLVGIVTDGDFLRRAELGTERRQ-------- 55
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
W + ++G+ VGD+M+ PV V +L + A + + +RLPV
Sbjct: 56 -GRWLDLLVGRGHIGADFVHSHGRTVGDIMSRPPVTVSTDASLAEIAEAMEKRNIKRLPV 114
Query: 214 VDADGKLVGIITRGNVVR 231
V D +L G++T + V+
Sbjct: 115 VSGD-RLAGMVTHTDFVQ 131
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 188 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+ V T + +AAR++L LPVVDA G+LVGI+T G+ +R A
Sbjct: 2 ITVTPGTPVAEAARIMLRNHIGGLPVVDASGRLVGIVTDGDFLRRA 47
>gi|408534327|emb|CCK32501.1| CBS domain-containing protein [Streptomyces davawensis JCM 4913]
Length = 223
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ VV+ + + L +++++ V+D +++G+VS+ DLL +
Sbjct: 6 HVVSDVMT--RDVAVVRRDAAFKDVVRTLHDRKVSALVVVDGGRRVLGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
DS + ++++L L+K G+LMT + VR T L AA
Sbjct: 64 FR-------------DSDPDRYTQLRRLSDLAKAGSVTAGELMTSPALTVRAETTLAQAA 110
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
R++ + +RLPVV +L G+++R ++++ L+
Sbjct: 111 RIMARARVKRLPVVGDTDRLEGVVSRSDLLKVFLR 145
>gi|254381603|ref|ZP_04996967.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340512|gb|EDX21478.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 213
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
+E+ V P T + ++L + ++G PV+DD+ ++VG+VS D+LA
Sbjct: 3 DEVVSVAPDTAFKDVAKLLAQYGVSGLPVLDDEDRVVGVVSQTDVLA------------- 49
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ ++ T GD+M+ V V DAARL+ RLP
Sbjct: 50 ------HAAPAPHPAEETARPTGSPTAGDVMSTPAVTVHAEETAADAARLMTRRGIERLP 103
Query: 213 VVDADGKLVGIITRGNVVR 231
VVD + +LVGI+TR +++R
Sbjct: 104 VVDEEDRLVGIVTRRDLLR 122
>gi|424887311|ref|ZP_18310916.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175083|gb|EJC75126.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 160
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 19/154 (12%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MTT L V P TTV EA ++ +T PV+D + + +GL+S+ D++ R
Sbjct: 9 MTTN--LVTVSPETTVAEAARCMLTHHVTAVPVVDPENRPLGLISEGDVM---------R 57
Query: 149 ADNSMFPEVDSTW-KTFNEVQKLLS------KTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ F + W + E + L + N + D+M A + E T+L + A
Sbjct: 58 HFGAQFQSKRAQWLRMLAEGEALAPEFLAEIRLNQQHARDIMQRAIISADEETSLAELAD 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
L+L+ +R+P++ DG LVGI++R +VVR+ ++
Sbjct: 118 LMLKHGIKRVPIL-RDGVLVGIVSRADVVRSVVE 150
>gi|16263041|ref|NP_435834.1| hypothetical protein SMa1086 [Sinorhizobium meliloti 1021]
gi|433616399|ref|YP_007193194.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
gi|14523696|gb|AAK65246.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|429554646|gb|AGA09595.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
Length = 224
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M K+ + + P +V A ++E +I+G PV DD +LVG++S+ DLL +
Sbjct: 5 DIM--KKRVLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAELGLV 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R D V + + F K + VGD+MT V V E + A L+
Sbjct: 63 SRRD---IAGVRAKPEAF-------IKGHSWRVGDVMTQPVVTVDEDMPVGRVAELMAAK 112
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+R+PV+ A+ ++VGII+R +++RA
Sbjct: 113 GIKRIPVMRAE-EMVGIISRSDILRA 137
>gi|395777450|ref|ZP_10457965.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 212
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
+G YTV D MT + V T + + ++ ++ PV++ D +++G+VS+ DLL
Sbjct: 3 AGPYTVSDVMT--HTVVAVGRETLFKDVVTLMERWKVAAVPVLEGDGRVIGVVSEADLLP 60
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ F E D E L+K G+ M+ V V L +A
Sbjct: 61 KEE-----------FRESDPDRAVQQERLADLAKAGALTAGESMSTPAVTVHADATLPEA 109
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
AR++ + +RL V+DA+G L G+++R ++++ L+
Sbjct: 110 ARIMARRRVKRLYVIDAEGYLEGVVSRADLLKVFLR 145
>gi|116750087|ref|YP_846774.1| hypothetical protein Sfum_2661 [Syntrophobacter fumaroxidans MPOB]
gi|116699151|gb|ABK18339.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 156
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 100 PTTTVDEALEIL------VEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
PT TV EA+ + +R+ G VID+D +LVG++S YD+L L M
Sbjct: 18 PTMTVAEAVLAFENASRTLGRRVFGMMVIDEDGELVGMISMYDILVL------------M 65
Query: 154 FPEVDSTWKTFNE------VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 207
P+ W + +++ L + VGDLM+ + + T+L ++L
Sbjct: 66 RPKHIHIWGEMKDIDVTGFIRQNLQRAKQIQVGDLMSTDIITITPETHLLSIVDIMLRKH 125
Query: 208 YRRLPVVDADGKLVGIITRGNV 229
RRLPV+D GK+VGI+ NV
Sbjct: 126 VRRLPVLDR-GKVVGIVHISNV 146
>gi|242279278|ref|YP_002991407.1| hypothetical protein Desal_1806 [Desulfovibrio salexigens DSM 2638]
gi|242122172|gb|ACS79868.1| CBS domain containing membrane protein [Desulfovibrio salexigens
DSM 2638]
Length = 145
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 19/157 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT EL + + + A ++ +RI P+++D+ + +GLV+ D+L +IS
Sbjct: 4 VNDLMTT--ELFTLSESDNLKMARSLMDLQRIRHIPIVNDEREFIGLVTHRDILRA-TIS 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D + E+DS G VG++M + E T+L++AA LLL
Sbjct: 61 QLADIDPATQGEIDS----------------GIPVGEIMRTDIKTISEDTSLKEAAVLLL 104
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+ KY PVV+ L+GI+T + ++ + + A E
Sbjct: 105 DHKYGCFPVVNEKNGLIGILTEADFLKLTISLMEALE 141
>gi|357024559|ref|ZP_09086708.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
gi|355543521|gb|EHH12648.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
Length = 214
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 16/140 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P V A I+++ RI+G PV+D+D +LVG+VS+ D L + ++ P
Sbjct: 14 VSPDHGVRHAARIMLDHRISGLPVVDNDGRLVGVVSEGDFLRRSELGVP-----ALLP-- 66
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
NE + + + K V DLMT +V E T + A L+ E +R+PV+
Sbjct: 67 -------NEARSYVKGHSWK-VSDLMTSDVIVADEDTTIARIAALMQEHGIKRIPVLRRQ 118
Query: 218 GKLVGIITRGNVVRAALQIK 237
+LVG+++R +++R + K
Sbjct: 119 -RLVGVVSRADLLRVFVAAK 137
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+MT V V + AAR++L+ + LPVVD DG+LVG+++ G+ +R
Sbjct: 5 DVMTVNVVTVSPDHGVRHAARIMLDHRISGLPVVDNDGRLVGVVSEGDFLR 55
>gi|120601585|ref|YP_965985.1| hypothetical protein Dvul_0535 [Desulfovibrio vulgaris DP4]
gi|120561814|gb|ABM27558.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
Length = 256
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A +++ E PV+D + KL+G+VSD D+ A S +
Sbjct: 43 VTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDI---------KEASPSKATTL 93
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D +E+ LLS+ V D+MT P+ V+ +E A L++E +PVVD +
Sbjct: 94 D-----MHELYYLLSEIK---VKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEE 145
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
G+LVGIIT ++ + + I G Q
Sbjct: 146 GQLVGIITDSDIFKVLIAITGVRSGGVQ 173
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ + MT + V T++ A++L+ E +RRLPV+D +GKL+GI++ ++ A+
Sbjct: 31 LIREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEAS 86
>gi|375096602|ref|ZP_09742867.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
gi|374657335|gb|EHR52168.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
Length = 225
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M K + V T + + +L E RI+ V+D+ +G+VS+ DLLA +
Sbjct: 5 TVADVM--KRPVVTVDAQTPFKDIVSLLAEHRISAVAVVDEGRHPLGVVSEADLLAKEDQ 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ S+F E+ W+ + +K G ++MT + L AAR L
Sbjct: 63 RGTAHP-PSVFTEL-RRWRRW-------TKARGATAREVMTRHVRTIHREEPLAVAARRL 113
Query: 204 LETKYRRLPVVDADGKLVGIITRGNV----VRAALQIKHATE 241
E + RRL V+D+ G LVG++ R +V +R +IK A E
Sbjct: 114 AEGRLRRLFVIDSSGTLVGVLARRDVLGVFLRPDEEIKRAVE 155
>gi|313125650|ref|YP_004035920.1| cbs-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
gi|448285488|ref|ZP_21476731.1| cbs-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
gi|312292015|gb|ADQ66475.1| CBS-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
gi|445576744|gb|ELY31194.1| cbs-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
Length = 167
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS-- 144
D MT E++ V P V + L L GFPV+D+D +VG+V+ +DL+ L
Sbjct: 7 DLMT--EDVETVSPDDDVSDVLGRLARADFNGFPVVDEDDHVVGIVTQHDLVGLFETKDR 64
Query: 145 ------GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
G ++ VD +W F+ + L K K + +MTP V V +L+
Sbjct: 65 TLWIPIGLPPFMETVTYAVDISWDDFD-LGVDLVKNMDKPIKKVMTPDVVTVEPDADLDA 123
Query: 199 AARLLL--ETKYRRLPVVDADGKLVGIITRGNVVRA 232
LL E RLPV++ DG+LVG++ R +V+RA
Sbjct: 124 ILDLLADDERDINRLPVIE-DGRLVGVVARQDVIRA 158
>gi|73668035|ref|YP_304050.1| hypothetical protein Mbar_A0488 [Methanosarcina barkeri str.
Fusaro]
gi|72395197|gb|AAZ69470.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 35/126 (27%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
DE L+IL K I+G PV+ D K+VG+V+ +LL PE
Sbjct: 43 DEVLKILKNKHISGVPVLKDS-KVVGVVTRTNLLQ--------------NPE-------- 79
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
E Q L LMT P+ + ++L+ AARLLLE RRLPVVD DGKLVG++
Sbjct: 80 -EEQLAL----------LMTRGPITISSGSDLQTAARLLLEHHIRRLPVVD-DGKLVGLV 127
Query: 225 TRGNVV 230
T +++
Sbjct: 128 TVADII 133
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS--- 172
+ PV+D + +L+G++SD D++A I S + + D W T+ ++ +S
Sbjct: 174 VKAVPVLDSNLELIGIISDRDVIAASIIEDSVEMSDMSAGQDDDAW-TWESMRDTMSIYY 232
Query: 173 -----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 227
K + D+M P+ T++ D AR + + ++P+++++ KL G++
Sbjct: 233 SVSRIKVPNLIGSDIMIREPITATYITSVSDCARKMKRNRIDQVPIINSNRKLQGLLRDH 292
Query: 228 NVVRAALQIK 237
++++ ++++
Sbjct: 293 DLLKPLIELE 302
>gi|399576936|ref|ZP_10770691.1| cbs-domain-containing membrane protein [Halogranum salarium B-1]
gi|399238380|gb|EJN59309.1| cbs-domain-containing membrane protein [Halogranum salarium B-1]
Length = 165
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M T E V P V + L L GFPV+DDD +VG+V+ +D+++L
Sbjct: 5 DIMRTTVE--TVGPDDDVSDVLGRLANVDFNGFPVVDDDGHVVGIVTQHDVVSLFQTKDR 62
Query: 147 GRADNSMFP--------EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
FP VD +WK ++ ++ GK V D+MT V V + +
Sbjct: 63 TLWIPVGFPPFMETLTYAVDVSWKDL-DLGVDAVRSAGKPVRDVMTTDVVTVAPDDDFDH 121
Query: 199 AARLLL--ETKYRRLPVVDADGKLVGIITRGNVVRA 232
LL E RLPVVD G LVGII R +V+RA
Sbjct: 122 VLDLLADDERDINRLPVVDDGGVLVGIIARQDVLRA 157
>gi|296532012|ref|ZP_06894792.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267665|gb|EFH13510.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 251
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + V PTT + + E+ ++G PV+D+ +L+GLV++ D+ L ++
Sbjct: 25 VQDLMT--RTVLTVPPTTPLATLAALFAERGVSGVPVVDEAGRLLGLVTEGDM--LRRLA 80
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + ++ E ++ +G+ D+M+ V +++AA LL
Sbjct: 81 APAERPRPWYQRLLASAPRQAEE---FARIHGRCAQDVMSTGLVTAPPEMPVDEAAALLE 137
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ + RRLPV+ +G+LVGI++R +++RA L
Sbjct: 138 KHRIRRLPVLR-EGRLVGILSRADLMRAML 166
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 172 SKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+K + V DLMT + V TT L A L E +PVVD G+L+G++T G+++R
Sbjct: 18 NKEDAMQVQDLMTRTVLTVPPTTPLATLAALFAERGVSGVPVVDEAGRLLGLVTEGDMLR 77
>gi|150400679|ref|YP_001324445.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
gi|150013382|gb|ABR55833.1| putative signal transduction protein with CBS domains
[Methanococcus aeolicus Nankai-3]
Length = 155
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE------- 156
+ +A+E+ I+G PVI+DD VG+VS+ D++ +++ N + P
Sbjct: 21 ISDAIELFKTHNISGAPVINDDNYFVGVVSEEDIIK--TLTTHNEDINILLPSPFDLLEL 78
Query: 157 -VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ +T K E +K + V ++M + + T + +A++++++ K +RLP+V+
Sbjct: 79 PLKTTLK-LEEYRKDIENAMKTKVKEIMVKDVITITPDTTINEASKIMVKNKVKRLPIVE 137
Query: 216 ADGKLVGIITRGNVVRA 232
+G+LVGI+TR +++ A
Sbjct: 138 -NGELVGIVTRHDILEA 153
>gi|374635803|ref|ZP_09707394.1| CBS domain containing protein [Methanotorris formicicus Mc-S-70]
gi|373561124|gb|EHP87367.1| CBS domain containing protein [Methanotorris formicicus Mc-S-70]
Length = 264
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 38/153 (24%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT K + + P TV +A+ + E FPV+ D KLVG+VS +DL+ D
Sbjct: 4 VSEYMTKK--VDCLSPNNTVKDAIRFVKETGHDAFPVVVD-GKLVGIVSVHDLVGKDE-- 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARL 202
+ VG++MT +V + N+ D RL
Sbjct: 59 -------------------------------DEKVGNIMTKREDMIVAKPDANIMDVGRL 87
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ T + +LPVVD + LVGIIT +V+R+ ++
Sbjct: 88 MFRTGFSKLPVVDDENNLVGIITNTDVIRSQIE 120
>gi|372222662|ref|ZP_09501083.1| putative signal transduction protein with CBS domains
[Mesoflavibacter zeaxanthinifaciens S86]
Length = 160
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 26/152 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K L +P ++ E +E + I+G PV+DD LVG++S+ D + IS
Sbjct: 25 VSDYMTRK--LITFRPDQSILEVMESFAKYNISGGPVLDDSGFLVGIISEAD--CMKQIS 80
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN Q +L K+ V MT A + + DAA + +
Sbjct: 81 ES---------------RYFN--QPILDKS----VERFMTKAVETIPHDMTIFDAAGIFV 119
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
RRLPV++ +G LVG I+R ++V AAL++
Sbjct: 120 RHNRRRLPVMN-NGLLVGQISRKDIVIAALKL 150
>gi|386390886|ref|ZP_10075667.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
gi|385731764|gb|EIG51962.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
Length = 220
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
KP T++ +A +++ E PV+DD+ +L G+VSD D+ A S +D
Sbjct: 15 KPGTSIMKAAKLMKENGFHRLPVVDDNDRLAGIVSDRDI---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ LLS+ V D+MT + + +E AA L+L LPVVD D
Sbjct: 66 -----MHELYYLLSEIK---VADIMTKKVIFIGPDDTVEKAAVLMLRNNVSGLPVVDGDS 117
Query: 219 KLVGIITRGNVVRAALQIKHATEMGAQ 245
K+VG+IT ++ + + I G Q
Sbjct: 118 KVVGVITDSDIFKVLVNITGVLNGGLQ 144
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ D M+ +PV + T++ AA+L+ E + RLPVVD + +L GI++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPGTSIMKAAKLMKENGFHRLPVVDDNDRLAGIVSDRDIKEAS 57
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT K + + P TV++A +++ ++G PV+D D K+VG+++D D+ L +I
Sbjct: 78 VADIMTKK--VIFIGPDDTVEKAAVLMLRNNVSGLPVVDGDSKVVGVITDSDIFKVLVNI 135
Query: 144 SG 145
+G
Sbjct: 136 TG 137
>gi|333916333|ref|YP_004490065.1| CBS domain-containing membrane protein [Delftia sp. Cs1-4]
gi|333746533|gb|AEF91710.1| CBS domain containing membrane protein [Delftia sp. Cs1-4]
Length = 232
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
A R AV A + + P + TV D M+ E V P V++A +L E +
Sbjct: 68 APRLRGAVDAYLSTEKGPSQPRQPLQTVADVMS--HEAVTVSPEAGVNDAWRVLAEHGVA 125
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
PV+D ++VGL+ D+ LD + G ++ + + NEV
Sbjct: 126 QAPVLDAGGRVVGLLLRADMAPLDLLPEPGAIKDA----IALARRPVNEV---------- 171
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++P P V TT+L A +LLET LPV D G L G I+R +++RA
Sbjct: 172 ----MISPIPTVA-TTTDLRRVAGVLLETGLPGLPVTDEQGLLAGFISRTDILRA 221
>gi|218262310|ref|ZP_03476824.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
DSM 18315]
gi|218223461|gb|EEC96111.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
DSM 18315]
Length = 491
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 31/130 (23%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +AL ++ E +I G PV+D+ LVG+V++ DL R + M VD
Sbjct: 109 TVGDALGMMKEYKIGGIPVVDESDHLVGIVTNRDL----------RFERDMNRSVD---- 154
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
++++K N +V ++T+LE AA +L + K +LPVVD+ +LVG
Sbjct: 155 ------EVMTKEN-----------LIVADQSTDLEAAASILQQHKIEKLPVVDSQKRLVG 197
Query: 223 IITRGNVVRA 232
+IT ++ RA
Sbjct: 198 LITYKDITRA 207
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L V +T ++ A IL + +I PV+D +LVGL++ D+
Sbjct: 154 DEVMTKENLIVADQSTDLEAAASILQQHKIEKLPVVDSQKRLVGLITYKDI 204
>gi|91200717|emb|CAJ73769.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 243
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNS---M 153
P T +DEA EI+ E R P++ + K+ G++SD DLL A SG + N+
Sbjct: 93 PDTRLDEAWEIIREHRFRHLPILTPNKKVAGIISDRDLLREAAQSEASGDKQPVNTPAQK 152
Query: 154 FPEVDSTWKTFNEVQ-KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ E D+ + + + K V D+ + T L + A++L+E +P
Sbjct: 153 WYEADAHYTDAGFYHDNIYTFPKKKTVLDICKTRILTATPDTELREIAKILIEEHIGSMP 212
Query: 213 VVDADGKLVGIITRGNVVR 231
+VD + L+GIITR +++R
Sbjct: 213 IVDENNHLLGIITRSDILR 231
>gi|386844881|ref|YP_006249939.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105182|gb|AEY94066.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798171|gb|AGF68220.1| hypothetical protein SHJGH_8558 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 215
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
S + V D MT + V + +E + E +++ PV++ D +++G+VS+ DLL
Sbjct: 2 ESSPHRVSDVMT--RAVVAVSRKARFKDIVERMEEWKVSALPVLEGDGRVIGVVSEADLL 59
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNL 196
+++ DS F ++ L L K +LM+ V V L
Sbjct: 60 PKEALR-------------DSNPDRFTPMRHLTDLDKAGAMSAEELMSTPAVTVHGDATL 106
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+AAR++ + +RLPVV+A+G L G+++RG++++ L+
Sbjct: 107 AEAARIMALRQVKRLPVVNAEGVLEGVVSRGDLLKVFLR 145
>gi|390939688|ref|YP_006403425.1| inosine-5''-monophosphate dehydrogenase [Sulfurospirillum barnesii
SES-3]
gi|390192795|gb|AFL67850.1| inosine-5''-monophosphate dehydrogenase [Sulfurospirillum barnesii
SES-3]
Length = 482
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K + T+ +AL I+ E RI+G PVIDD L+G++++ DL R +N
Sbjct: 99 IKASATLRDALAIMSEYRISGVPVIDDTDTLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
K V +LMT P++ V++ T L+DA + K +LPVVD
Sbjct: 145 ------------------SKNVEELMTKMPLITVKKGTTLDDAEAIFRTNKVEKLPVVDE 186
Query: 217 DGKLVGIIT 225
+ KL G+IT
Sbjct: 187 NNKLAGLIT 195
>gi|297564600|ref|YP_003683572.1| hypothetical protein [Meiothermus silvanus DSM 9946]
gi|296849049|gb|ADH62064.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
Length = 181
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + M T+ + V+ T+ A + ++E R+ G PV+++ KLVGL+ DLL
Sbjct: 21 VKELMKTRP--YSVRLDETLLVAAQRMLEHRLGGLPVVNEAGKLVGLIEVDDLLP----- 73
Query: 145 GSGRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
R +N F EV++ W V+ + + K V M VV LE A
Sbjct: 74 ---RPENVPFSEVEALRLFDEWVDPGSVESVYRQYQSKPVAAAMRTELAVVSPEDPLETA 130
Query: 200 -ARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
R++ + +YRR+ VVD G+LVG +TR + +R
Sbjct: 131 LVRMMQDRQYRRVLVVDEQGQLVGTLTRSDFLR 163
>gi|296133812|ref|YP_003641059.1| putative signal transduction protein with CBS domains [Thermincola
potens JR]
gi|296032390|gb|ADG83158.1| putative signal transduction protein with CBS domains [Thermincola
potens JR]
Length = 147
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 85/156 (54%), Gaps = 17/156 (10%)
Query: 89 MTTKEELHVV----KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
M KE +H KP ++ E + +++ ++ P++DD+ K++G+V++ D++
Sbjct: 1 MLAKEVMHTNVLTGKPENSIQELIRMMLNFNVSMLPIVDDNLKVLGVVTEGDIIY----- 55
Query: 145 GSGRADNSMFPEVD---STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
RA + P VD + E+ K ++K +G ++MT E T + + AR
Sbjct: 56 ---RAYSDGEP-VDVGVAFLGKLREMIKSINKRSGTTAREVMTEELFTASEDTPISEIAR 111
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 237
+++ K + +P++ ADGKLVG+++R +++R ++ K
Sbjct: 112 MMVREKIKNVPIL-ADGKLVGLVSRRDIMRLVMEGK 146
>gi|320333947|ref|YP_004170658.1| hypothetical protein [Deinococcus maricopensis DSM 21211]
gi|319755236|gb|ADV66993.1| CBS domain containing protein [Deinococcus maricopensis DSM 21211]
Length = 207
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTT+ V P T V +AL IL E+ PV+D KL G+V+ DL
Sbjct: 3 VRDWMTTRP--MTVTPETPVLDALRILKERGFRRLPVMDGS-KLAGIVTRKDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P +T + E+ +LSK VG++M+ V E +EDAA +
Sbjct: 53 ------KDAMPSKATTLSVW-ELNYMLSKLT---VGEMMSRPVVTADEGEYMEDAALRMQ 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
E LPV+D G++ GIIT +V+RA + I E G +
Sbjct: 103 EHNVGGLPVLDTTGRMTGIITITDVLRAFIDIMGLREGGTR 143
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
+V D MT P+ V T + DA R+L E +RRLPV+D KL GI+TR ++
Sbjct: 2 LVRDWMTTRPMTVTPETPVLDALRILKERGFRRLPVMDGS-KLAGIVTRKDL 52
>gi|432334464|ref|ZP_19586142.1| hypothetical protein Rwratislav_06860, partial [Rhodococcus
wratislaviensis IFP 2016]
gi|430778613|gb|ELB93858.1| hypothetical protein Rwratislav_06860, partial [Rhodococcus
wratislaviensis IFP 2016]
Length = 172
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + VV+ + ++ A +L E PV+DD +LVG+++ D+L RA +
Sbjct: 11 QRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RAGH 61
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + + VG++MT V L D +++LL+ R L
Sbjct: 62 A----------------------SSETVGEVMTAPAVAAPMYQYLADVSQMLLQHGLRSL 99
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
PVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 100 PVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 133
>gi|261418180|ref|YP_003251862.1| hypothetical protein GYMC61_0709 [Geobacillus sp. Y412MC61]
gi|319767860|ref|YP_004133361.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261374637|gb|ACX77380.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
gi|317112726|gb|ADU95218.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
Length = 214
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 22/146 (15%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
PT T+ EAL++L RI PV+D + +L+GLV+ DL D S P +
Sbjct: 16 PTNTIAEALQLLRHHRIRHLPVVDGEGRLLGLVTSQDL-----------RDAS--PSIFH 62
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ ++QK +S M DL+ P+ +E+ A L E + LP+V+ GK
Sbjct: 63 LHEHLEDLQKPVSTI---MKTDLIVGHPL-----DFVEEVAALFYEHRIGCLPIVN-HGK 113
Query: 220 LVGIITRGNVVRAALQIKHATEMGAQ 245
LVGIIT+ +++R +++ + G+Q
Sbjct: 114 LVGIITQTDLLRTFIELTGVHQPGSQ 139
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 178 MVGDLMTPAPVVVRETTN-LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
M+ + + APVV TN + +A +LL + R LPVVD +G+L+G++T ++ A+ I
Sbjct: 1 MLVEQIMKAPVVTLCPTNTIAEALQLLRHHRIRHLPVVDGEGRLLGLVTSQDLRDASPSI 60
Query: 237 KHATE 241
H E
Sbjct: 61 FHLHE 65
>gi|256829700|ref|YP_003158428.1| hypothetical protein Dbac_1922 [Desulfomicrobium baculatum DSM
4028]
gi|256578876|gb|ACU90012.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
DSM 4028]
Length = 196
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MT +H ++ + EA ++ I+G PV+D + ++ G+VS+ D L +
Sbjct: 53 TAEDIMTAP--VHCLQKGMSASEAAALMAGLGISGAPVLDVEGRICGVVSEKDYLRKMGL 110
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ + + + +V+KLL V D+M+ PVV T + + + +L
Sbjct: 111 PGTASFMTVVSTCLSTPGCMVTDVRKLL-------VDDIMSSPPVVASRETPVAELSEML 163
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVV 230
RLP+ D +G+ VGI+TR ++V
Sbjct: 164 ARHSINRLPICDEEGRPVGIVTRTDLV 190
>gi|424787304|ref|ZP_18214072.1| CBS domain protein [Streptococcus intermedius BA1]
gi|422114067|gb|EKU17785.1| CBS domain protein [Streptococcus intermedius BA1]
Length = 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DIMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEISGYGEEG 140
>gi|328949777|ref|YP_004367112.1| hypothetical protein Marky_0241 [Marinithermus hydrothermalis DSM
14884]
gi|328450101|gb|AEB11002.1| CBS domain containing protein [Marinithermus hydrothermalis DSM
14884]
Length = 264
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 54 DRVSALRRS-SAVFASGTLTANS------AAPSSGVYTVGDFMTTKEELHVVKPTTTVDE 106
DR LRR AVF+ N+ A V D+MT V P T V E
Sbjct: 13 DRADLLRRVVRAVFSRAEADRNADTALGGTARKEASMLVRDWMTPNP--ITVSPDTPVPE 70
Query: 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 166
A+ ++ EK PV++ D +LVG+V+D DL P +T + E
Sbjct: 71 AIRLMQEKGFRRLPVVNRD-RLVGIVTDRDL-------------KEAMPSKATTLSIW-E 115
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
+ L++K + ++M + V LEDAA L+ E K LPV++ GKLVGIIT
Sbjct: 116 INYLIAKMP---ISEVMATPVITVEADKPLEDAALLMEERKIGGLPVLEG-GKLVGIITI 171
Query: 227 GNVVRAALQIKHATEMG 243
+V++A +++ E G
Sbjct: 172 TDVLKAFVEVMGLKEGG 188
>gi|429195455|ref|ZP_19187487.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428668821|gb|EKX67812.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 250
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 85 VGDFMTTKEELHVVKPT--TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
VG MTT VV+ T E +L + RI+G PV+D+D K++G++S+ DL+A +
Sbjct: 6 VGSVMTTD----VVRAEYGTPFKEVARLLADHRISGLPVVDEDDKVIGVISETDLIARQA 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ F T+ ++ +KTN + G LMT + + +AAR
Sbjct: 62 ATPEPYEPRRRF-----TFPGLTRGARRQAAKTNARTAGRLMTAPAITAHADDTIVEAAR 116
Query: 202 LLLETKYRRLPVVDAD 217
+ + + RLPV+D +
Sbjct: 117 TMAQHQVERLPVLDEE 132
>gi|374580522|ref|ZP_09653616.1| drug resistance transporter, EmrB/QacA subfamily [Desulfosporosinus
youngiae DSM 17734]
gi|374416604|gb|EHQ89039.1| drug resistance transporter, EmrB/QacA subfamily [Desulfosporosinus
youngiae DSM 17734]
Length = 624
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDS 159
+++ +E +E R +G PVID+ ++G VSD D+L A + G + + + P+ +
Sbjct: 486 SIERVIEKFIEYRTSGLPVIDNSRHIIGYVSDGDVLRYMAKQDVHVVGESFSLVLPDNE- 544
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+ ++ ++LL + V ++ T + V +T+L + RL E K R++PV D
Sbjct: 545 --EFMSKARELLQRN----VLEIATKHTITVELSTSLAEVCRLFYEHKLRKIPVTQND-V 597
Query: 220 LVGIITRGNVVRAALQ 235
LVG I+RG+ +R ++
Sbjct: 598 LVGTISRGDTMRYLMK 613
>gi|218781404|ref|YP_002432722.1| hypothetical protein Dalk_3566 [Desulfatibacillum alkenivorans
AK-01]
gi|218762788|gb|ACL05254.1| CBS domain containing membrane protein [Desulfatibacillum
alkenivorans AK-01]
Length = 205
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T + E I+ ++G PV+D D ++G++S+ D L G+ + S +
Sbjct: 72 VAQDTLLSETAAIMEAANVSGVPVVDGDNFIMGIISEKDFLE----KMGGKKNGSFMGVI 127
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V + + + K D+MT + + + + + +++L E + R+PVVD
Sbjct: 128 AECLSNRGCVAMPIREKSAK---DVMTFPVITAQRSNTISELSKMLAEHQINRIPVVDGK 184
Query: 218 GKLVGIITRGNVVRA 232
G+LVGI++RG++V +
Sbjct: 185 GRLVGIVSRGDIVES 199
>gi|57242158|ref|ZP_00370098.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
RM3195]
gi|57017350|gb|EAL54131.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
RM3195]
Length = 484
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 33/129 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P ++ EALE++ E RI+G PV+D++ KL+G++++ DL
Sbjct: 99 IAPNASIYEALELMAEYRISGVPVVDEERKLLGILTNRDL-------------------- 138
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+ S N + V ++MT AP++ + L+DA ++ K +LP+VD
Sbjct: 139 -----------RFESNFNNR-VENVMTKAPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DGKLVGIIT 225
LVG+IT
Sbjct: 187 SNHLVGLIT 195
>gi|300787350|ref|YP_003767641.1| hypothetical protein AMED_5479 [Amycolatopsis mediterranei U32]
gi|384150704|ref|YP_005533520.1| hypothetical protein RAM_27930 [Amycolatopsis mediterranei S699]
gi|399539233|ref|YP_006551895.1| hypothetical protein AMES_5414 [Amycolatopsis mediterranei S699]
gi|299796864|gb|ADJ47239.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340528858|gb|AEK44063.1| hypothetical protein RAM_27930 [Amycolatopsis mediterranei S699]
gi|398320003|gb|AFO78950.1| hypothetical protein AMES_5414 [Amycolatopsis mediterranei S699]
Length = 203
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T+ EA E+L T PV+DDD +L+G+V++ DL+ GR P
Sbjct: 14 VQPLTSAKEAAELLAAHGFTALPVVDDDDRLIGIVTEADLI-------RGR-----IPVD 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+E + + GK VGDLMT + T++ D + L++ + R +P+VD
Sbjct: 62 PRHAHEHHE-----AASAGKTVGDLMTTPVTAMSTGTDVADLCQALVDARIRAMPIVDG- 115
Query: 218 GKLVGIITRGNVVR 231
+VGI+TRG+VVR
Sbjct: 116 SAVVGIVTRGDVVR 129
>gi|115522828|ref|YP_779739.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
gi|115516775|gb|ABJ04759.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisA53]
Length = 329
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T+ + V P T + E L++ I+ PV+DDD +G++S+ DL+ D
Sbjct: 3 VSDVMSTR--VVSVGPETPARKVAETLLKNGISAVPVLDDDGAPIGIISEGDLMPRDETD 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQK-----LLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
R D + + ++ Q L S T+ + ++M V + +L +
Sbjct: 61 RDARRDWWL--------RMLSQGQDVSPDYLKSLTDDRSAREVMISPVVTISADADLIEV 112
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
A LL + +R+P + DGKLVGI++R ++VRA Q
Sbjct: 113 AELLSSKRIKRVPAM-RDGKLVGIVSRADLVRAFAQ 147
>gi|374630841|ref|ZP_09703226.1| putative signal transduction protein with CBS domains
[Methanoplanus limicola DSM 2279]
gi|373908954|gb|EHQ37058.1| putative signal transduction protein with CBS domains
[Methanoplanus limicola DSM 2279]
Length = 159
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE---- 156
+ V EA IL +KRI G PV++ + +L G+V++ D+L+L + +D+ P
Sbjct: 17 NSKVSEAAGILRKKRIGGLPVMNGE-RLAGIVTETDILSL--LDTGDLSDDLWLPSPLEI 73
Query: 157 VDSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
++ + F + +K LS V D+M+ V + + ++EDAA L+L RLPV
Sbjct: 74 IEIPIREFINWEKTKKALSDIGDSPVSDIMSTEIVSIDDEADIEDAAGLMLSEGIARLPV 133
Query: 214 VDADGKLVGIITRGNVVRA 232
+ + +LVGIITR ++VR
Sbjct: 134 LKQN-RLVGIITRQDIVRG 151
>gi|157151138|ref|YP_001450902.1| acetoin utilization putative/CBS domain-containing protein
[Streptococcus gordonii str. Challis substr. CH1]
gi|157075932|gb|ABV10615.1| acetoin utilization putative/CBS domain protein [Streptococcus
gordonii str. Challis substr. CH1]
Length = 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT + D+M + V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---IKDVMIRKVITVSQYASLEDAIYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + ++ G+IT ++ +A L++ E G +
Sbjct: 103 KNKVGILPVVDNE-QVYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|406672855|ref|ZP_11080080.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
gi|423315693|ref|ZP_17293598.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405585797|gb|EKB59600.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405587399|gb|EKB61127.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
Length = 486
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 31/123 (25%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+ EA E + +I+G PV+D++ L+G++++ D+ + +S
Sbjct: 108 TLGEAKETMARYKISGLPVVDEENNLIGIITNRDVKYQEDLS------------------ 149
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
+V+ L++K N L+T + TNLE+A ++LLE + +LP+VD KLVG
Sbjct: 150 --VKVEHLMTKEN------LITS-----HKDTNLEEAKKILLENRVEKLPIVDEKNKLVG 196
Query: 223 IIT 225
+IT
Sbjct: 197 LIT 199
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ + TKE L T ++EA +IL+E R+ P++D+ KLVGL++ D+
Sbjct: 153 EHLMTKENLITSHKDTNLEEAKKILLENRVEKLPIVDEKNKLVGLITIKDI 203
>gi|320527726|ref|ZP_08028896.1| CBS domain pair protein [Solobacterium moorei F0204]
gi|320131891|gb|EFW24451.1| CBS domain pair protein [Solobacterium moorei F0204]
Length = 225
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 21/130 (16%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T + +ALEI+ + PV+D + KL+GL+++ ++ SG S++
Sbjct: 18 TPLSKALEIMGKNHFHRLPVVDANHKLIGLITEG---LVNDASGKNATSLSIY------- 67
Query: 162 KTFNEVQKLLSKTNGK--MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
E+ LLS+T K M+ D+ T +P+V LE+AA+++LE LPVVD +
Sbjct: 68 ----ELNYLLSRTQAKDIMIRDVHTISPMVF-----LEEAAQVMLENAVNVLPVVDEENH 118
Query: 220 LVGIITRGNV 229
+VGIIT ++
Sbjct: 119 VVGIITEKDI 128
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 227
V D MT P+ + T L A ++ + + RLPVVDA+ KL+G+IT G
Sbjct: 3 VKDHMTANPITITADTPLSKALEIMGKNHFHRLPVVDANHKLIGLITEG 51
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSISGSGRADNS 152
++H + P ++EA ++++E + PV+D++ +VG++++ D+ L + G R
Sbjct: 85 DVHTISPMVFLEEAAQVMLENAVNVLPVVDEENHVVGIITEKDIFLTFVDLMGLKRQGTR 144
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKM 178
+D F +V KL ++ N +
Sbjct: 145 FVMLIDDKPGVFAQVTKLFAQENANV 170
>gi|419966550|ref|ZP_14482472.1| hypothetical protein WSS_A30524 [Rhodococcus opacus M213]
gi|414568153|gb|EKT78924.1| hypothetical protein WSS_A30524 [Rhodococcus opacus M213]
Length = 185
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + VV+ + ++ A +L E PV+DD +LVG+++ D+L RA
Sbjct: 8 QRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RAGT 58
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + + VG++MT V L D +++LL R L
Sbjct: 59 A----------------------SSETVGEVMTAPAVAAPMYQYLADVSKMLLHQGLRSL 96
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
PVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 97 PVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 130
>gi|456392579|gb|EMF57922.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 228
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135
AA S + V D MT + + V + +E + + R++ PV++ + +++G+VS+
Sbjct: 2 AAVSETPHIVSDVMT--QTVVAVGRDAPFKQIVETMEQWRVSAMPVLEGEGRVIGVVSEA 59
Query: 136 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRET 193
DLL + DS + + +L ++K + G+LM+ V V
Sbjct: 60 DLLPKEEFR-------------DSDPSLYEQRGRLSAIAKAGAVVAGELMSTPAVTVHPD 106
Query: 194 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
T L AAR++ + +RLPVVD G L GI++R ++++ L+
Sbjct: 107 TTLSQAARIMAVRRVKRLPVVDDVGMLQGIVSRADLLKVFLR 148
>gi|407473078|ref|YP_006787478.1| hypothetical protein Curi_c05570 [Clostridium acidurici 9a]
gi|407049586|gb|AFS77631.1| CBS domain-containing protein [Clostridium acidurici 9a]
Length = 151
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 20/143 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS---------ISGSGR 148
V P T ++E +IL + I+G PV+DDD K+VG+VS+ DLL ++ IS G
Sbjct: 14 VGPDTKIEEIAKILSDNNISGVPVVDDD-KIVGIVSEGDLLHKEANPRIPTIYPISAFGS 72
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
F + +K + E K LS ++MT + E T++ A ++++ K
Sbjct: 73 -----FTYL-GDYKKYEEDIKKLSAMKA---SEIMTTEVISESEDTDINKIASIMIDKKI 123
Query: 209 RRLPVVDADGKLVGIITRGNVVR 231
R+P+ D KLVGI++R ++++
Sbjct: 124 NRIPIT-RDDKLVGIVSRADLIK 145
>gi|262283196|ref|ZP_06060963.1| CBS domain-containing protein [Streptococcus sp. 2_1_36FAA]
gi|262261448|gb|EEY80147.1| CBS domain-containing protein [Streptococcus sp. 2_1_36FAA]
Length = 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT + D+M + V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---IKDVMIRKVITVSQYASLEDAIYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + ++ G+IT ++ +A L++ E G +
Sbjct: 103 KNKVGILPVVDNE-QVYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|409387294|ref|ZP_11239534.1| Acetoin utilization acuB protein [Lactococcus raffinolactis 4877]
gi|399205601|emb|CCK20449.1| Acetoin utilization acuB protein [Lactococcus raffinolactis 4877]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + V PTT V +A +I+ E+ I PVI++D KLVGLV+
Sbjct: 3 VKDFMTKK--VIYVSPTTKVAKAADIMKEQGIHRLPVIEND-KLVGLVT----------- 48
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+G + + P V ++ + E+ LL+KT VG++M + + + +LEDA +
Sbjct: 49 -AGTIEKAS-PSVATSLSVY-EMNYLLNKTT---VGEVMIREVLTISKYASLEDAVYRMR 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ LPVVD D ++ G+IT +V A L+I E G +
Sbjct: 103 QNNVGVLPVVDHD-QISGVITDKDVFGAFLKIAGYGESGVR 142
>gi|322390023|ref|ZP_08063561.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
gi|321143277|gb|EFX38717.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
Length = 255
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 71 LTANSAAPSSG--VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
+ N S G V V DFMT K + + P TT+ A +++ E+ + PVI++D KL
Sbjct: 24 IKYNKTNKSIGELVMAVKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KL 80
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VGLV++ + S S S+F E+ LL+KT V D+M +
Sbjct: 81 VGLVTEG---TIAEASPSKATSLSIF-----------EMNYLLNKTK---VKDVMLRDVI 123
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
V + +LEDA L+ + K LPVVD D ++ G+IT ++ RA L++ E G +
Sbjct: 124 TVSKFASLEDATYLMYKNKVGILPVVDND-QVSGVITDRDIFRAFLEVSGYGEEGVR 179
>gi|325971923|ref|YP_004248114.1| hypothetical protein [Sphaerochaeta globus str. Buddy]
gi|324027161|gb|ADY13920.1| CBS domain containing membrane protein [Sphaerochaeta globus str.
Buddy]
Length = 214
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 18/146 (12%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P ++ EA ++ ++++ PV+D + KLVG++++ D+L S +
Sbjct: 16 PDMSIAEASALMKQEKVHRLPVLDKEKKLVGIITEKDILYATPSPASSLS---------- 65
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 219
+E+ LLSK V LM+ V + + T +E+AAR++++ LPV++ D K
Sbjct: 66 ----IHEMAYLLSKLT---VKKLMSKNVVTINKDTTVEEAARMMVDQDLSSLPVLEGD-K 117
Query: 220 LVGIITRGNVVRAALQIKHATEMGAQ 245
L+GI+T+ ++ + L++ A G +
Sbjct: 118 LIGIVTKSDMFKILLELFGARHFGVR 143
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
MT PV ++ +A+ L+ + K RLPV+D + KLVGIIT +++ A
Sbjct: 7 MTRNPVTATPDMSIAEASALMKQEKVHRLPVLDKEKKLVGIITEKDILYA 56
>gi|410694908|ref|YP_003625530.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
gi|294341333|emb|CAZ89748.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
Length = 159
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T V E IL+E RI G PV D L+G+V++ DL+ RA +
Sbjct: 14 IAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLV--------HRAADERLEPR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S WK F K G+ +MT + V +N+ AARLL + + L
Sbjct: 66 ESLWKENFYRSVFRRHTPEPDKAEGRTAEQVMTREVLTVAPDSNVTVAARLLADHNIKSL 125
Query: 212 PVVDADGKLVGIITRGNVVR 231
PV++ + +LVG+I+R ++V+
Sbjct: 126 PVIEHE-RLVGMISRFDLVK 144
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V DLMTP P+ + T + + AR+L+E + +PV DA G L+GI+T G++V A
Sbjct: 3 VRDLMTPNPIRIAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLVHRA 57
>gi|237511946|gb|ACQ99689.1| putative bile efflux protein [Bifidobacterium breve UCC2003]
gi|339479060|gb|ABE95522.1| Multidrug resistance protein B, MFS member, bile efflux, induced
upon bile salt exposure [Bifidobacterium breve UCC2003]
Length = 683
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVV+ DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVTATPDQHVGEVARILAKKQFKKLPVVNGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 230 VRA 232
+++
Sbjct: 580 LKS 582
>gi|414152863|ref|ZP_11409190.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455245|emb|CCO07092.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 148
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 21/153 (13%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS--------- 142
K ++ V T + + +IL +K I+G PV++ + KLVG+V++ DLL ++
Sbjct: 8 KTDVITVTADTNIKDIAQILTDKGISGVPVVNQEGKLVGIVTEGDLLHKEANPRIPKFFG 67
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
I G+ F VD + F ++ L + ++MT + V + T++ A L
Sbjct: 68 ILGA----MIYFGGVDQYREDFKKLAALKA-------SEIMTSEVITVSKETDIRTIATL 116
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
++E +R+PVV+ +GK++GI++R ++++ Q
Sbjct: 117 MIEHNIKRIPVVE-NGKVLGIVSRSDIIKTLTQ 148
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
D+M + V TN++D A++L + +PVV+ +GKLVGI+T G+++
Sbjct: 5 DIMKTDVITVTADTNIKDIAQILTDKGISGVPVVNQEGKLVGIVTEGDLLH 55
>gi|270208642|ref|YP_003329413.1| hypothetical protein pSmeSM11ap115 [Sinorhizobium meliloti]
gi|76880916|gb|ABA56086.1| conserved hypothetical protein [Sinorhizobium meliloti]
Length = 224
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 25/152 (16%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D M K+++ + P V A ++E +I+G PV DD +LVG++S+ DLL L S+
Sbjct: 5 DIM--KKKVLSISPDHGVRHAARTMLENQISGLPVCDDRGRLVGILSEGDLLRRAELGSV 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ---KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
S W+ V+ + K + VGDLMT V V E + A
Sbjct: 63 S----------------WRDIAAVRTKPEAFIKGHSWRVGDLMTQPVVTVDEGMPVGRVA 106
Query: 201 RLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
L+ +R PV+ A+ ++VGI++R +++RA
Sbjct: 107 ELMAAKGIKRTPVMRAE-EMVGIVSRSDILRA 137
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+M + + + AAR +LE + LPV D G+LVGI++ G+++R A
Sbjct: 5 DIMKKKVLSISPDHGVRHAARTMLENQISGLPVCDDRGRLVGILSEGDLLRRA 57
>gi|394987874|ref|ZP_10380713.1| hypothetical protein SCD_00274 [Sulfuricella denitrificans skB26]
gi|393793093|dbj|GAB70352.1| hypothetical protein SCD_00274 [Sulfuricella denitrificans skB26]
Length = 215
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 23/147 (15%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 147
+ E+ V+ + ++ A LV RI PV+D ++LVG+VS+ DLL + ++
Sbjct: 83 YQIMSREVTAVQAESRIENAWRTLVTGRIRQAPVLDSAYRLVGIVSERDLLTVLNVEDGA 142
Query: 148 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 207
V+ +L++T V ++M V ++ AR+LL+T
Sbjct: 143 -------------------VRDVLART----VAEVMVSPVVSTDPIADIRRVARVLLDTG 179
Query: 208 YRRLPVVDADGKLVGIITRGNVVRAAL 234
+ +PVV+ G++VG ++RG+++RA +
Sbjct: 180 FTGVPVVNEAGEMVGFLSRGDILRAVI 206
>gi|21226927|ref|NP_632849.1| hypothetical protein MM_0825 [Methanosarcina mazei Go1]
gi|452209408|ref|YP_007489522.1| hypothetical protein MmTuc01_0846 [Methanosarcina mazei Tuc01]
gi|20905236|gb|AAM30521.1| conserved protein [Methanosarcina mazei Go1]
gi|452099310|gb|AGF96250.1| hypothetical protein MmTuc01_0846 [Methanosarcina mazei Tuc01]
Length = 283
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 35/128 (27%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
DE L+IL K I+G PV+ D K+VG+V+ +LL PE
Sbjct: 25 DEVLKILKNKHISGVPVLKDS-KVVGIVTRTNLLQ--------------NPE-------- 61
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
E Q L LMT P+ + ++L+ AARLLL+ RRLPVVD DGKLVG++
Sbjct: 62 -EEQLAL----------LMTRDPITISPGSDLQSAARLLLQHGIRRLPVVD-DGKLVGLV 109
Query: 225 TRGNVVRA 232
T +VV A
Sbjct: 110 TVADVVGA 117
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR-ADNSMFPEVDS-TWKTFNEVQKLLSK 173
+ PV+D +L+G++SD D+++ I S +D S + D+ TW++ + +
Sbjct: 156 VKAVPVLDAALELIGIISDRDIISASVIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYS 215
Query: 174 TN----GKMVG-DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ ++G D+M P+ ++ D AR + + ++P+++++ KL G++ +
Sbjct: 216 VSRIKVPNLIGSDIMIREPITATYIASISDCARKMKRNRIDQIPIINSNRKLQGLLRDHD 275
Query: 229 VVRAALQ 235
+++ ++
Sbjct: 276 LLKPLIE 282
>gi|399035557|ref|ZP_10732972.1| CBS domain-containing protein [Rhizobium sp. CF122]
gi|398066688|gb|EJL58247.1| CBS domain-containing protein [Rhizobium sp. CF122]
Length = 218
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 27/154 (17%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG- 145
D M T ++ + ++V +A++++V K I+G PVID+D L GL+++ DL+ G
Sbjct: 5 DIMNT--DITTISADSSVHQAIDLMVAKNISGLPVIDNDGNLCGLLTEGDLMRRIEFGGG 62
Query: 146 --SGRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+G DN+ + D +W+ F D+M+ + + V T
Sbjct: 63 RSAGNPDNTSLVDFDDYIRSRSWRVF----------------DVMSASVISVTPETPAAA 106
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
A ++ + K +R+PVV +L+GI++R ++++
Sbjct: 107 VAEVMFQHKIKRVPVVSGK-RLLGIVSRIDLLKG 139
>gi|326315657|ref|YP_004233329.1| CBS domain-containing membrane protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372493|gb|ADX44762.1| CBS domain containing membrane protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 383
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA---LDSISGSGRADNSMFPEVD 158
T + EA ++ +RI PV+D ++VG+V+ D + LD G G ++ V
Sbjct: 255 TGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHQGIGEQLRALVRRVG 314
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ T EV VG +MT VV E + L E + +PV+DA+
Sbjct: 315 AVHSTKPEV-----------VGQIMTRQVRVVSEQRPALELVPLFTEDGHHHIPVIDAER 363
Query: 219 KLVGIITRGNVVRA 232
+LVGIIT+ ++VRA
Sbjct: 364 RLVGIITQSDLVRA 377
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
GD+M+ PV T L++A L+ + + LPVVD ++VGI+T + +R
Sbjct: 241 GDIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMR 292
>gi|381190949|ref|ZP_09898461.1| hypothetical protein RLTM_08259 [Thermus sp. RL]
gi|384431655|ref|YP_005641015.1| putative signal transduction protein [Thermus thermophilus
SG0.5JP17-16]
gi|333967123|gb|AEG33888.1| putative signal transduction protein with CBS domains [Thermus
thermophilus SG0.5JP17-16]
gi|380451038|gb|EIA38650.1| hypothetical protein RLTM_08259 [Thermus sp. RL]
Length = 150
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ V+ P T++EA ++E R GFPV+D + KL+G+V +LL
Sbjct: 3 VRDLMT--QDPVVLGPEATLEEAARRILETRYGGFPVVDGEGKLLGVVQVEELLP----- 55
Query: 145 GSGRADNSMFPEVDS-----TW---KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 196
+N F +V++ W E+ + +T K V P V L
Sbjct: 56 ---HPENVPFSDVEALQLFGEWVDEDVLAEIYRRYQRTPVKAVMRTEIPK---VHPDDPL 109
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
A +++L T R LPVVD +GK+VGI+TR + ++ L
Sbjct: 110 GKALKVVLTTDLRHLPVVDEEGKVVGILTRSDFLKLIL 147
>gi|239908873|ref|YP_002955615.1| hypothetical protein DMR_42380 [Desulfovibrio magneticus RS-1]
gi|239798740|dbj|BAH77729.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 220
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
K TT++ +A +++ E PV+DDD +LVG+++D D+ A S +D
Sbjct: 15 KATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDV---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ LLS+ VGD+MT + V +E AA L+L +PVVDA G
Sbjct: 66 -----MHELYYLLSEIK---VGDIMTKTVISVSPDDTVEKAAVLMLRHNVGGMPVVDAKG 117
Query: 219 KLVGIITRGNVVRAALQIKHATEMGAQ 245
+VG+IT ++ + + I G Q
Sbjct: 118 LVVGVITDSDIFKVLVSITGVLSGGLQ 144
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ D M+ PV + TT++ AA+L+ E Y RLPVVD DG+LVGIIT +V A+
Sbjct: 2 LIKDWMSKTPVTAKATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDVKEAS 57
>gi|110634581|ref|YP_674789.1| hypothetical protein Meso_2233 [Chelativorans sp. BNC1]
gi|110285565|gb|ABG63624.1| CBS domain containing membrane protein [Chelativorans sp. BNC1]
Length = 232
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M+T+ V ++ A +I+++ ++G PV+ DD +LVG++++ DLL + G+
Sbjct: 5 DLMSTR--CVTVSAENSIKHAAQIMLDHDLSGLPVLADDGRLVGIITEGDLLRRCEL-GN 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
+A + PE + +G VG +M+P V V E + + A L+
Sbjct: 62 VKAGEELLPEKRARGYLHG---------HGWKVGHVMSPDVVAVTEDASADHIAELMARH 112
Query: 207 KYRRLPVVDADGKLVGIITRGNVVR 231
+R+PV+ D ++VGI++R ++++
Sbjct: 113 GIKRVPVLRGD-RVVGIVSRRDLLK 136
>gi|288561286|ref|YP_003424772.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
gi|288543996|gb|ADC47880.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
Length = 283
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 34/151 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + + V+ + ++ + ++ E + G+PV+D++ +VG+++ YDLL D
Sbjct: 13 VRDYMT--KNVITVRYDSLNNDVIALMKETKHDGYPVVDEEGHIVGIITAYDLLLKD--- 67
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
W+T + V +M+ +V RE ++ DA+R++
Sbjct: 68 ----------------WET-------------EYVKSIMSQEVIVAREDMHINDASRVMF 98
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
RLPVVD + + GI+T ++VR+ ++
Sbjct: 99 RHGISRLPVVDKERHVKGIMTNTDIVRSHIE 129
>gi|448462810|ref|ZP_21597869.1| peptidase M50 [Halorubrum kocurii JCM 14978]
gi|445818031|gb|EMA67899.1| peptidase M50 [Halorubrum kocurii JCM 14978]
Length = 394
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +EELH V T+V + + + E+R TG+PV+ D LVG+V+ D
Sbjct: 249 TVADVMTRREELHTVSGGTSVADLMNRMFEERHTGYPVLHGD-DLVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + V D+M V V T+ A + +
Sbjct: 302 ------------------RSVREVER-----DAYQVADVMETDLVGVGPETDAMTALQTM 338
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVD D +LVG+I+R +++ A
Sbjct: 339 QENGVGRLPVVDRDNELVGLISRSDLMTA 367
>gi|46199411|ref|YP_005078.1| hypothetical protein TTC1109 [Thermus thermophilus HB27]
gi|55981442|ref|YP_144739.1| hypothetical protein TTHA1473 [Thermus thermophilus HB8]
gi|46197036|gb|AAS81451.1| conserved hypothetical protein [Thermus thermophilus HB27]
gi|55772855|dbj|BAD71296.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 150
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 21/158 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ V+ P T++EA ++E R GFPV+D + +L+G+V +LL
Sbjct: 3 VKDLMT--QDPVVLGPEATLEEAARRILETRYGGFPVVDGEGRLLGVVQVEELLP----- 55
Query: 145 GSGRADNSMFPEVDS-----TW---KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 196
+N F +V++ W E+ + +T K V + T P V E L
Sbjct: 56 ---HPENVPFSDVEALQLFGEWVDEDALAEIYRRYQRTPVKAV--MRTEIPKVHPEDP-L 109
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
A +++L T R LPVVD +GK+VGI+TR + ++ L
Sbjct: 110 GKALKVVLTTDLRHLPVVDEEGKVVGILTRSDFLKLIL 147
>gi|325286429|ref|YP_004262219.1| signal transduction protein with CBS domains [Cellulophaga lytica
DSM 7489]
gi|324321883|gb|ADY29348.1| putative signal transduction protein with CBS domains [Cellulophaga
lytica DSM 7489]
Length = 154
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 26/152 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K L KP ++ E +E+ + I+G PV+D++ LVG++S+ D + IS
Sbjct: 23 VEDYMTKK--LITFKPDQSILEVMELFTKHNISGGPVLDNNGFLVGIISEAD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN Q +L+K+ V + MT + ++ DAA + +
Sbjct: 79 ES---------------RYFN--QPILNKS----VENFMTRDVEFISPDISIFDAAGIFV 117
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
RRLPV+ D LVG I+R +VV AAL++
Sbjct: 118 RHNRRRLPVLKND-ILVGQISRKDVVIAALKL 148
>gi|328954414|ref|YP_004371748.1| signal transduction protein with CBS domains [Desulfobacca
acetoxidans DSM 11109]
gi|328454738|gb|AEB10567.1| putative signal transduction protein with CBS domains [Desulfobacca
acetoxidans DSM 11109]
Length = 426
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 90 TTKEELHVVKP-----TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
T EL ++P T++ E +L+ TG PV+D + VG++S DL+ +
Sbjct: 116 TQVRELMTLQPRKVNLETSLAEVTRLLLSSTFTGLPVVDAEKHPVGVISQTDLIYKAGMP 175
Query: 145 GS-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G S +VD+ +L + ++MT V + + + +A L+
Sbjct: 176 MRLGLLSESADEKVDA----------VLEALGSRQAREIMTKPAVTIGQEQRVTEAVNLM 225
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
LE K +RLPVVDA+GKLVG ++R ++ + L+
Sbjct: 226 LEKKVKRLPVVDAEGKLVGNLSRVDIFHSILR 257
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M + E V P T V+E + ++ I V+D +GL+SD DLL +
Sbjct: 278 VSDIM--RRETTTVLPETPVEEVIRLIDCGDIQRVCVVDQQGNFLGLISDRDLLVAFADR 335
Query: 145 GSGRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G D S P + + +Q+ L K ++M + + E + +A RL
Sbjct: 336 HPGIWDYFVSKLPFTERR-RRHKHLQRHLEV---KTASEVMNTHIITIEEDAPINEAIRL 391
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+LE +RLPV+DA GK G+++R ++R
Sbjct: 392 MLENCIKRLPVLDAQGKFKGMVSREALLRTGF 423
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V EA+ +++EK++ PV+D + KLVG +S D+ +S+ E W+T
Sbjct: 218 VTEAVNLMLEKKVKRLPVVDAEGKLVGNLSRVDIF------------HSILRECPD-WQT 264
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
F + QK+ + N + V D+M V T +E+ RL+ +R+ VVD G +G+
Sbjct: 265 FQK-QKI-NVENLRFVSDIMRRETTTVLPETPVEEVIRLIDCGDIQRVCVVDQQGNFLGL 322
Query: 224 IT 225
I+
Sbjct: 323 IS 324
>gi|410095930|ref|ZP_11290922.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides goldsteinii
CL02T12C30]
gi|409227961|gb|EKN20856.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides goldsteinii
CL02T12C30]
Length = 491
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 31/129 (24%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V +AL ++ E +I G PV+D+ LVG+V++ DL R + M +D
Sbjct: 110 VADALAMMAEYKIGGIPVVDEGGYLVGIVTNRDL----------RFERDMNRSID----- 154
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
++++K N VV ++T+LE AA++L + K +LPVVD+ KL+G+
Sbjct: 155 -----EVMTKEN-----------LVVTDQSTDLEAAAQILQQHKIEKLPVVDSHNKLIGL 198
Query: 224 ITRGNVVRA 232
+T ++ +A
Sbjct: 199 VTYKDITKA 207
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
D + TKE L V +T ++ A +IL + +I PV+D KL+GLV+ D+ A D S
Sbjct: 154 DEVMTKENLVVTDQSTDLEAAAQILQQHKIEKLPVVDSHNKLIGLVTYKDITKAKDKPSA 213
Query: 146 SGRADNSM--FPEVDSTWKTFNEVQKLL 171
A + V T+ TF V L+
Sbjct: 214 CKDAKGRLRVAAGVGVTFNTFERVAALV 241
>gi|392428332|ref|YP_006469343.1| hypothetical protein SCIM_0441 [Streptococcus intermedius JTH08]
gi|419777561|ref|ZP_14303472.1| CBS domain protein [Streptococcus intermedius SK54]
gi|383844797|gb|EID82208.1| CBS domain protein [Streptococcus intermedius SK54]
gi|391757478|dbj|BAM23095.1| conserved hypothetical protein [Streptococcus intermedius JTH08]
Length = 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DIMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|27379751|ref|NP_771280.1| hypothetical protein bll4640 [Bradyrhizobium japonicum USDA 110]
gi|27352904|dbj|BAC49905.1| bll4640 [Bradyrhizobium japonicum USDA 110]
Length = 252
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P + +A+++++ I+G PV+D LVG++ + D L I G+ N +
Sbjct: 14 IRPEAPITDAIKVMLAHHISGLPVVDSADNLVGIICESDFLRRSEI-GTEHERNRLL--- 69
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S V K G+ V +MT PV E L++ A ++ +PV+ AD
Sbjct: 70 -SLLLGAERVASEFVKERGRKVEQVMTRQPVTTNEQAPLDEVADVMERRHLNHIPVMRAD 128
Query: 218 GKLVGIITRGNVVRA 232
++VGIITR + + A
Sbjct: 129 -RIVGIITRSDFLSA 142
>gi|429195457|ref|ZP_19187489.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428668823|gb|EKX67814.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 241
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ MT E+ + T E + +L RI+G PV+D D K+VG++S+ DL+ +
Sbjct: 5 TVGEVMT--REVVGARQETPFKEVVRLLDRHRISGLPVVDADDKVVGVISETDLIRRQAA 62
Query: 144 SGS-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
R P ++ +K G LM+ + V + DAA++
Sbjct: 63 QAERDRGRGFRLP------ALRRRTRRTTAKARATTAGQLMSTPAITVHPEQGVADAAQV 116
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ RLPVVD + +L+GI TR +++R L+
Sbjct: 117 MERHHVERLPVVDEEDRLIGIATRRDLLRVFLR 149
>gi|282164424|ref|YP_003356809.1| hypothetical protein MCP_1754 [Methanocella paludicola SANAE]
gi|282156738|dbj|BAI61826.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA---DNSMFP 155
+P+ VD ++++ EK I+G PV+D + K+VG+V++ D++ L + R + +
Sbjct: 15 RPSDPVDGVVKLMSEKDISGLPVVDGE-KVVGMVTEADIMRLLVVPEPSRTLWMPSPLEV 73
Query: 156 EVDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
++ K ++++L + G+ VG +M + + ++EDAA +++ K RL
Sbjct: 74 LIEIPLKEIIQLRRLQQSVKDAGGQNVGSIMQKDVLSISPDDDIEDAASAMVKHKVNRL- 132
Query: 213 VVDADGKLVGIITRGNVVRA 232
VV DGKLVGIITR +++
Sbjct: 133 VVLKDGKLVGIITRDDIIHG 152
>gi|167949411|ref|ZP_02536485.1| hypothetical protein Epers_24153 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 208
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 40 RPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYT--VGDFMTTKEELHV 97
R C V++ + + R + + G N+ A +++ V D MT +
Sbjct: 15 RVCCGVYAAYLKVGNTI----RIAYGLSHGETRENNQAYEEELFSMLVRDIMTNAPK--T 68
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + E + ++ R +G PV++D K+ G+V++ D+L D + P+
Sbjct: 69 VSPDAKLLEVVSLMCLFRFSGLPVVED-GKVKGIVAEKDVLHRMFPGLEDFKDGMVAPDY 127
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
DS + +V L V D+MT + V ++ AA +++ K+RR+PV + D
Sbjct: 128 DSMLTQYKDVVTL-------KVADVMTSRVITVDPDMHILKAATVMIRHKFRRIPVAE-D 179
Query: 218 GKLVGIITRGNVVRAALQIKHATEM 242
G+L+G+++ G++ +A Q ++ M
Sbjct: 180 GELLGMLSLGDIHKAIFQYNISSNM 204
>gi|386814873|ref|ZP_10102091.1| CBS domain containing membrane protein [Thiothrix nivea DSM 5205]
gi|386419449|gb|EIJ33284.1| CBS domain containing membrane protein [Thiothrix nivea DSM 5205]
Length = 149
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDS 142
V D MTT + K T V + +E++ +I+G PV+DD+ +VG+VS+ D+L
Sbjct: 3 VKDIMTT--NVKTAKADTPVRDIVEVMCFNKISGLPVVDDNNNVVGVVSEKDVLRKMFPD 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
IS R + + P+ + K +++ L+ KT GD+M+ + A L
Sbjct: 61 ISDVAREEGA--PDFEKMEKDYSDA--LMLKT-----GDIMSKLVASASPDMPVMKAVSL 111
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ K RR+PVV KL+GII+ G+V +A
Sbjct: 112 MCVQKIRRIPVVQG-TKLMGIISLGDVHKA 140
>gi|156741506|ref|YP_001431635.1| signal transduction protein [Roseiflexus castenholzii DSM 13941]
gi|156232834|gb|ABU57617.1| putative signal transduction protein with CBS domains [Roseiflexus
castenholzii DSM 13941]
Length = 212
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 19/148 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV +AL + EKRI PVID +LVG+V++ DLL S S+
Sbjct: 14 VAPKTTVSDALMLFREKRIRRAPVIDHH-RLVGIVAERDLL-----FASPSPITSL---- 63
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S W E+ LLSK V ++MT + V E T +E+AAR++ + + LPV+
Sbjct: 64 -SVW----ELNYLLSKLT---VDEVMTHEVITVAEDTPIEEAARIMADKRVGGLPVMRGH 115
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
+VGIIT ++ + L++ E G +
Sbjct: 116 -DVVGIITETDLFKILLELMSVREHGVR 142
>gi|383786734|ref|YP_005471303.1| putative transcriptional regulator containing CBS domains
[Fervidobacterium pennivorans DSM 9078]
gi|383109581|gb|AFG35184.1| putative transcriptional regulator containing CBS domains
[Fervidobacterium pennivorans DSM 9078]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT +L V TV+E +EIL + ++G V+D D K+VG VS+ D++ S
Sbjct: 6 VKDFMTY--DLTFVFENDTVEEVIEILNKTGLSGLCVVDTDLKVVGFVSEDDIIKACLPS 63
Query: 145 GSGRADNSMF-PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ F P+ + K + K + +G T V+ L + ++
Sbjct: 64 YFNLLQTAAFLPDTNLFIKNLKNIAK-------EPIGKYATKPVFTVKPNDTLLYVSDMI 116
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 242
+ YR +PVVD + L+G +TR ++++A+ I+ E+
Sbjct: 117 MRKGYRIIPVVDVNNVLLGYVTRAAILQSAINIEIPGEV 155
>gi|162451567|ref|YP_001613934.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
gi|161162149|emb|CAN93454.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
Length = 263
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 42 GCRVFSVLATSSDRVSALRRSSAVFASGT-LTANSAAPSSGVYTVGDFMTTKEELHVVKP 100
G R SV+ +S S + +G + N AP + + T D + + E+
Sbjct: 64 GSRTTSVVCHASHAAPGTEESDPLRNAGVDVAVNPEAPLAEIMT-KDVICIRTEV----- 117
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG--------SGRADNS 152
++D+ +LV I+G PV+D K VG+VS D+L G + R+
Sbjct: 118 --SLDDITALLVRHEISGMPVVDAAGKPVGMVSRADVLRAADERGDTEESRRVASRSGEV 175
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
E+ + + V+ D+MTP V + E+ ++ AA L+ RLP
Sbjct: 176 APLEMSQGFHVYEPVRVTAR--------DVMTPVVVQLHESASIRQAASLMAYEGVHRLP 227
Query: 213 VVDADGKLVGIITRGNVVR 231
VV DGK+VGI++ +V+R
Sbjct: 228 VVSDDGKVVGILSSLDVLR 246
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+ ++MT + +R +L+D LL+ + +PVVDA GK VG+++R +V+RAA
Sbjct: 102 LAEIMTKDVICIRTEVSLDDITALLVRHEISGMPVVDAAGKPVGMVSRADVLRAA 156
>gi|423070804|ref|ZP_17059580.1| hypothetical protein HMPREF9177_00897 [Streptococcus intermedius
F0413]
gi|355364898|gb|EHG12625.1| hypothetical protein HMPREF9177_00897 [Streptococcus intermedius
F0413]
Length = 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|150400031|ref|YP_001323798.1| signal transduction protein [Methanococcus vannielii SB]
gi|150012734|gb|ABR55186.1| putative signal transduction protein with CBS domains
[Methanococcus vannielii SB]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE----VD 158
++++ +++ EK I+G P+++ + ++VG++S+ D++ SI+ + + P ++
Sbjct: 19 SIEKVIKLFREKSISGAPIVEGE-RIVGIISESDIIK--SITSHDERVSLVLPSPFDLIE 75
Query: 159 STWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
KT +V++ + + + V + MT + + T + AA +++ K +RLPVV+
Sbjct: 76 LPLKTALKVEQFMEDIDNALKIEVWEAMTEKVITISPETTINKAAETMVKNKIKRLPVVE 135
Query: 216 ADGKLVGIITRGNVVRAAL 234
+GKLVGIITRG+++ A +
Sbjct: 136 -NGKLVGIITRGDLIEAMV 153
>gi|87121679|ref|ZP_01077566.1| CBS domain protein [Marinomonas sp. MED121]
gi|86162930|gb|EAQ64208.1| CBS domain protein [Marinomonas sp. MED121]
Length = 148
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 28/156 (17%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-- 139
V TV D M T L + T ++ +A +I+ +K I P+IDDD K +G+++ + L
Sbjct: 7 VQTVSDLMVTN--LVTLAETASLADAKKIMQDKNIRNLPIIDDDGKCIGMLTQREYLKHA 64
Query: 140 --LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
L S G+G E+Q +SK M D++T + + T+L+
Sbjct: 65 FYLVSQFGTGMLSKK-------------EMQTPVSKA---MNTDMLT-----IEQDTHLD 103
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
AA +E KY LPVVD G+LVGI+T + V+ A
Sbjct: 104 TAAEFFVENKYGCLPVVDQ-GRLVGILTPIDFVKLA 138
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
V DLM V + ET +L DA +++ + R LP++D DGK +G++T+ ++ A +
Sbjct: 10 VSDLMVTNLVTLAETASLADAKKIMQDKNIRNLPIIDDDGKCIGMLTQREYLKHAFYL 67
>gi|365859659|ref|ZP_09399513.1| CBS domain protein [Acetobacteraceae bacterium AT-5844]
gi|363711852|gb|EHL95559.1| CBS domain protein [Acetobacteraceae bacterium AT-5844]
Length = 228
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ V P T V + ++ I+G PV++ D L+GLV++ DL+ ++
Sbjct: 3 VRDIMT--RDVMTVSPDTPVPALATLFADRGISGVPVVEADGSLIGLVTEGDLMR--RLA 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S + + ++ +G+ D+M+ VV E + AA LL
Sbjct: 59 AEDEAPKSWLSRL---FGAAPRQAHDYAQIHGQRARDVMSTKLEVVSEEDTVAHAAALLE 115
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ + RRLPVV DG+L G+++R +++RA L
Sbjct: 116 KRRIRRLPVV-KDGRLAGVLSRADLMRAVL 144
>gi|345878370|ref|ZP_08830087.1| hypothetical protein Rifp1Sym_bz00180 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344224626|gb|EGV51012.1| hypothetical protein Rifp1Sym_bz00180 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 66 FASGTLTANSAAPSSGVYT--VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID 123
+ G N+ A +++ V D MT + V P + E + ++ R +G PV++
Sbjct: 50 LSHGETRENNQAYEEELFSMLVRDIMTNAPK--TVSPDAKLLEVVSLMCLFRFSGLPVVE 107
Query: 124 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 183
D K+ G+V++ D+L D + P+ DS + +V L V D+M
Sbjct: 108 D-GKVKGIVAEKDVLHRMFPGLEDFKDGMVAPDYDSMLTQYKDVVTL-------KVADVM 159
Query: 184 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 242
T + V ++ AA +++ K+RR+PV + DG+L+G+++ G++ +A Q ++ M
Sbjct: 160 TSRVITVDPDMHILKAATVMIRHKFRRIPVAE-DGELLGMLSLGDIHKAIFQYNISSNM 217
>gi|197122932|ref|YP_002134883.1| hypothetical protein AnaeK_2529 [Anaeromyxobacter sp. K]
gi|220917724|ref|YP_002493028.1| hypothetical protein A2cp1_2625 [Anaeromyxobacter dehalogenans
2CP-1]
gi|196172781|gb|ACG73754.1| CBS domain containing protein [Anaeromyxobacter sp. K]
gi|219955578|gb|ACL65962.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 146
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 29/155 (18%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ +V DFMT +L V+ + + A +L I PV+ + KLVGL++ DLL
Sbjct: 1 MISVADFMT--RDLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLL--- 54
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
R+ + P + V ++MT PV VR T L AAR
Sbjct: 55 ------RSGQAGAP-----------------AARDRAVSEVMTREPVAVRPGTGLAHAAR 91
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
L+LE K+ LPV + DG LVGI+T + VR A +
Sbjct: 92 LMLERKFGCLPVCEDDGLLVGIVTEADFVRFAADV 126
>gi|386334890|ref|YP_006031061.1| Transporter [Ralstonia solanacearum Po82]
gi|334197340|gb|AEG70525.1| Transporter [Ralstonia solanacearum Po82]
Length = 437
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MT + V T+V AL +L + PV+DD +L+G+V+ DL +
Sbjct: 295 TCADIMT--PSVVTVSAATSVPHALRLLQRHGVKSLPVLDDGRRLIGIVTRADLTGTAAR 352
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ R + W + V D+MTP + +R + D L
Sbjct: 353 APRQRLRD---------WFAIGAMTP-------PRVSDVMTPRVLAIRADAPMADLVPLF 396
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +PVVDA G+L GI+T+ +++ A
Sbjct: 397 ASAGHHHIPVVDAHGRLAGILTQADIIHA 425
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 168 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D +L+GI+TR
Sbjct: 284 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKSLPVLDDGRRLIGIVTR 343
Query: 227 GNV 229
++
Sbjct: 344 ADL 346
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 25/139 (17%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P TV EA +++ E I G VI ++ +L G+V++ DL+ + GR PE
Sbjct: 29 MRPDGTVYEAAKLMKENNI-GSVVIMEEGELRGIVTERDLITRYIAAEDGRR-----PE- 81
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+V+ V ++MT P+ +R+ T++++AAR+++E RRL VV+ D
Sbjct: 82 --------DVK----------VSEIMTKDPITIRDNTDIDEAARIMIEKNIRRLIVVNYD 123
Query: 218 GKLVGIITRGNVVRAALQI 236
G++VGII+ ++++ A I
Sbjct: 124 GRVVGIISSRDILKVAPHI 142
>gi|398787640|ref|ZP_10549995.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
gi|396992803|gb|EJJ03896.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
Length = 231
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MTT + V E +E + +++ PV+ + ++VG+VS+ DLL +
Sbjct: 6 HLVRDVMTTT--VAAVDRAARFKEIIETMERWQVSALPVLAAEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S P+ + ++V++ + T G+LMT + VR L AAR+
Sbjct: 64 FRESD-------PDRLEQLRRVDDVRRAEAVT----AGELMTSPALTVRADATLSQAARV 112
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ +RLPVVDA G L GI++R ++++ L+
Sbjct: 113 MARESVKRLPVVDAHGVLSGIVSRADLLKVFLR 145
>gi|374710730|ref|ZP_09715164.1| signal transduction protein with CBS and DRTGG domains
[Sporolactobacillus inulinus CASD]
Length = 437
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 148 RADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
+ +S FP VDS K V + ++ + + LMTP PVVV TT++ AA ++
Sbjct: 219 KTSHSRFPVVDSQMKVVGIVAMKDVMKQQTADTIETLMTPLPVVVNPTTSVAAAAHQMIW 278
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ LPVVD L+G+ITR +V++A I+ +MG
Sbjct: 279 EGFDGLPVVDTQQHLLGMITRRDVLKALQMIQQQPQMG 316
>gi|383319118|ref|YP_005379959.1| transcriptional regulator [Methanocella conradii HZ254]
gi|379320488|gb|AFC99440.1| putative transcriptional regulator [Methanocella conradii HZ254]
Length = 253
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 18/136 (13%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
V P V ++++EK ++ P++D D LVG+VS+ D ++ + R+ P+
Sbjct: 135 VAPPDARVSHIRKLMMEKGVSRVPIMDGDA-LVGMVSETD------VANAMRSIKKHSPQ 187
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
+ N V+ L++ D+M + T+L+DAA+L+++ LPV+D
Sbjct: 188 ----SRQDNNVELLIAM-------DIMRTNVITATPETSLKDAAKLMVDKDIGALPVLDG 236
Query: 217 DGKLVGIITRGNVVRA 232
G+LVGIITR ++VRA
Sbjct: 237 QGRLVGIITRRDIVRA 252
>gi|160897350|ref|YP_001562932.1| hypothetical protein Daci_1907 [Delftia acidovorans SPH-1]
gi|160362934|gb|ABX34547.1| CBS domain containing membrane protein [Delftia acidovorans SPH-1]
Length = 232
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 60 RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGF 119
R AV A + + P + TV D M+ E V P V++A +L E +
Sbjct: 70 RLRGAVDAYLSTEKGPSQPRQPLQTVADVMS--HEAVTVSPEAGVNDAWRVLAEHGVAQA 127
Query: 120 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179
PV+D ++VGL+ D+ LD + G ++ + + NEV
Sbjct: 128 PVLDAGGRVVGLLLRADMAPLDLLPEPGAIKDA----IALARRPVNEV------------ 171
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++P P V TT+L A +LLET LPV D G L G I+R +++RA
Sbjct: 172 --MISPIPTVA-TTTDLRRVAGVLLETGLPGLPVTDEQGLLAGFISRTDILRA 221
>gi|456356702|dbj|BAM91147.1| hypothetical protein S58_51680 [Agromonas oligotrophica S58]
Length = 141
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
TT+ E E+ +PV+++D +++G+V+ +D+L + + N M P
Sbjct: 24 TTIRELGEMFDRDDYNTYPVVEND-EVIGIVTKFDVLKCFAFTP-----NQMLPRY---- 73
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
L+++T V D+MT + VR T L +L++E + R LPV D D LV
Sbjct: 74 ------SDLMNRT----VADVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDNSLV 123
Query: 222 GIITRGNVVRA 232
GI+ R ++VRA
Sbjct: 124 GIVAREDIVRA 134
>gi|86157756|ref|YP_464541.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774267|gb|ABC81104.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 146
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 29/155 (18%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ +V DFMT +L V+ + + A +L I PV+ + KLVGL++ DLL
Sbjct: 1 MISVADFMT--RDLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLL--- 54
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
R+ + P + V ++MT PV VR T L AAR
Sbjct: 55 ------RSGQAGAP-----------------AARDRAVSEVMTREPVAVRPGTGLAHAAR 91
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
L+LE K+ LPV + DG LVGI+T + VR A +
Sbjct: 92 LMLERKFGCLPVCEDDGLLVGIVTEADFVRFAADV 126
>gi|453054062|gb|EMF01518.1| hypothetical protein H340_05761 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 226
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+VG+ MT+ E+ + T + + +L +R++G PV+D D K++G+VS+ DLL L +
Sbjct: 5 SVGEIMTS--EVAHARADTPHRDLVTLLRLRRVSGVPVVDHDDKVIGVVSEADLLRLRT- 61
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+G +P + + ++ + TPA V V DAAR++
Sbjct: 62 DGTGAGHRGRWPGLPPLVPVPRRLGAGAARAPVTAAALMSTPA-VTVHPYQRAADAARVM 120
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
RLPVVD + +L+GI+TR +++R ++ A
Sbjct: 121 DRHHVNRLPVVDEEDRLIGIVTRHDLLRVFVRTDEA 156
>gi|432331213|ref|YP_007249356.1| putative transcriptional regulator, contains C-terminal CBS domains
[Methanoregula formicicum SMSP]
gi|432137922|gb|AGB02849.1| putative transcriptional regulator, contains C-terminal CBS domains
[Methanoregula formicicum SMSP]
Length = 282
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 37/161 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT+ + +HV P D+ L+IL I+G PVI + KLVG+++ DLL
Sbjct: 3 VRDYMTS-DVVHVEIPGNR-DDVLKILKRTGISGVPVIKNK-KLVGIITRKDLL------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
SK +G LMT PV + +++AAR+L+
Sbjct: 54 ---------------------------SKPEETQLGLLMTAKPVTIGPDMEMKEAARILV 86
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
RRLPVV+ D LVG+++ +V+ A Q+K E+ +
Sbjct: 87 TKHIRRLPVVE-DNHLVGLLSVADVIHALAQVKCREEIKEK 126
>gi|268324812|emb|CBH38400.1| conserved hypothetical protein containing CBS domain pair
[uncultured archaeon]
Length = 154
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 110 ILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-DSISGSGRADNSMFPEVDSTWKTFNEVQ 168
+L E I G PV++D ++VG+VS D+L L D F +D +E++
Sbjct: 28 VLKENSIAGVPVVNDRKEVVGVVSVSDILKLLDDFHWY----TPFFSAMDILHLHSDELE 83
Query: 169 KL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+ + + + V D M+ P + T ++DAA+++ T + RLPV+D GKLVGI+
Sbjct: 84 NVKRDIEEVSEMKVKDAMSKNPKTIAPDTLIDDAAQIMYSTGFNRLPVLDGKGKLVGIVA 143
Query: 226 RGNVV 230
R +++
Sbjct: 144 RADII 148
>gi|218885517|ref|YP_002434838.1| signal transduction protein with CBS domains [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218756471|gb|ACL07370.1| putative signal transduction protein with CBS domains
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 142
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD M+T L +K T ++ A ++ RI P++D GL++ D+L+
Sbjct: 4 VGDLMSTG--LFTLKKTDSLRAARSLMQLARIRHIPIVDAKGDFQGLLTHRDILS----- 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S F +VD + NE+ G VG++M V V T L DAA LLL
Sbjct: 57 ----ATISRFADVDEAVQ--NEIDA------GIPVGEIMRTDVVRVHPDTLLRDAAELLL 104
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
KY LPV + D +LVGI+T + ++ + + A E
Sbjct: 105 HHKYGCLPVTEGD-RLVGIVTEADFLKLTISLLDAVE 140
>gi|115523746|ref|YP_780657.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
gi|115517693|gb|ABJ05677.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisA53]
Length = 242
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P ++ +A I++++ ++G PV++D +L+G++S+ D + I G+ R +
Sbjct: 14 VGPEASIVDAANIMLKQHVSGLPVVNDAGELIGVISEGDFIRRTEI-GTERKRGRWLRLL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
++ ++ +G+ V ++MT P V+ + + + + + +RLPV+ D
Sbjct: 73 LGPGQSASD----FVHEHGRKVSEIMTSHPHTVQADATVSEIVKTMEKYHVKRLPVLQ-D 127
Query: 218 GKLVGIITRGNVVRA 232
G++VGI+TR N+++A
Sbjct: 128 GRMVGIVTRKNLLKA 142
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT V V ++ DAA ++L+ LPVV+ G+L+G+I+ G+ +R
Sbjct: 6 IMTHDVVTVGPEASIVDAANIMLKQHVSGLPVVNDAGELIGVISEGDFIR 55
>gi|385263153|ref|ZP_10041245.1| CBS domain protein [Streptococcus sp. SK643]
gi|385188467|gb|EIF35952.1| CBS domain protein [Streptococcus sp. SK643]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ P ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 54 QAS-------PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVITVSRYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NNQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|320159747|ref|YP_004172971.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
gi|319993600|dbj|BAJ62371.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
Length = 427
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
T++ +H++ P V +A + ++E + PV+D + ++VG+++ DLL G R
Sbjct: 128 TRDVVHLM-PEMNVRQAWQKMLESGVKAMPVVDSERRVVGILTSEDLLE----RGVIRQR 182
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
S+ +D E +LLS + V D+MT + RE +L +A R +++ +R
Sbjct: 183 LSVAVRLDEA--EIQEELRLLS-ASPLTVKDVMTQPVITAREDEHLGNAVRRMIDKGLKR 239
Query: 211 LPVVDADGKLVGIITRGNVVR 231
+PVV+A +LVG+++R +++R
Sbjct: 240 MPVVNAGNQLVGMLSRLDILR 260
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 20/179 (11%)
Query: 55 RVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK 114
R+ LR+ S S TL +++AA V TVG+ M T +L V++ T +D LE
Sbjct: 255 RLDILRQVSG---SPTLPSSAAAVRGAVRTVGEVMRT--DLPVIRLTERLDTLLEKFAAC 309
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174
V+D+ K VG++SD D++ + + R +++L S
Sbjct: 310 DSNRLLVVDEQNKPVGVISDSDVVV--RVEAAQRKG------------ILQALRRLTSPP 355
Query: 175 NGKMVG-DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
K+ DL +P + V + A + +L + L VVD G L+GI+ R +++ A
Sbjct: 356 PLKVTAEDLYSPGVLTVPTDAPIASAVQTMLAEGRKVLAVVDKQGTLLGIVDRQSLLEA 414
>gi|149003370|ref|ZP_01828259.1| hypothetical protein CGSSp14BS69_05177 [Streptococcus pneumoniae
SP14-BS69]
gi|237650403|ref|ZP_04524655.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae CCRI 1974]
gi|237822483|ref|ZP_04598328.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae CCRI 1974M2]
gi|418125359|ref|ZP_12762275.1| CBS domain pair family protein [Streptococcus pneumoniae GA44511]
gi|418143565|ref|ZP_12780365.1| CBS domain pair family protein [Streptococcus pneumoniae GA13494]
gi|418191302|ref|ZP_12827806.1| CBS domain pair family protein [Streptococcus pneumoniae GA47388]
gi|418213924|ref|ZP_12840659.1| CBS domain pair family protein [Streptococcus pneumoniae GA54644]
gi|419457126|ref|ZP_13997072.1| CBS domain protein [Streptococcus pneumoniae GA02254]
gi|419484381|ref|ZP_14024157.1| CBS domain protein [Streptococcus pneumoniae GA43257]
gi|421300607|ref|ZP_15751278.1| CBS domain pair family protein [Streptococcus pneumoniae GA19998]
gi|147758553|gb|EDK65551.1| hypothetical protein CGSSp14BS69_05177 [Streptococcus pneumoniae
SP14-BS69]
gi|353799403|gb|EHD79722.1| CBS domain pair family protein [Streptococcus pneumoniae GA44511]
gi|353809306|gb|EHD89566.1| CBS domain pair family protein [Streptococcus pneumoniae GA13494]
gi|353857203|gb|EHE37166.1| CBS domain pair family protein [Streptococcus pneumoniae GA47388]
gi|353871207|gb|EHE51078.1| CBS domain pair family protein [Streptococcus pneumoniae GA54644]
gi|379532612|gb|EHY97837.1| CBS domain protein [Streptococcus pneumoniae GA02254]
gi|379583892|gb|EHZ48769.1| CBS domain protein [Streptococcus pneumoniae GA43257]
gi|395900031|gb|EJH10970.1| CBS domain pair family protein [Streptococcus pneumoniae GA19998]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|78357121|ref|YP_388570.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219526|gb|ABB38875.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 142
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ VGD MTT EL + T T+ A ++ RI P++D+ + +GL++ D+L
Sbjct: 1 MLNVGDLMTT--ELFTLLETDTLKTARSLMQLARIRHIPIVDEHGRFIGLLTHRDILEA- 57
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+IS +NS+ E+DS G V ++M V L DAA
Sbjct: 58 TISRFAEVENSVQDEIDS----------------GIPVSEIMRTDVRRVPPDMRLRDAAE 101
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+L KY LPVV++ G LVGI+T + ++ + + A E
Sbjct: 102 MLFRHKYGCLPVVES-GILVGIVTEADFLKLTISLLDAVE 140
>gi|73669501|ref|YP_305516.1| hypothetical protein Mbar_A2002 [Methanosarcina barkeri str.
Fusaro]
gi|72396663|gb|AAZ70936.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 154
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEV 157
KP TV E IL E ++G PV++ + +LVG++S+ DLL L + G S F +
Sbjct: 15 KPDDTVRETARILKENNVSGAPVLEGE-ELVGIISEADLLKLLILPEKGELWLPSPFEVI 73
Query: 158 DSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + + E +K+LS + ++M + ++E+A+ ++ + RLPV
Sbjct: 74 EVPIRELLGWEETKKMLSDVGSTKIEEIMIRNVHTISSEASIEEASEHMIRHRINRLPVT 133
Query: 215 DADGKLVGIITRGNVVRA 232
+ D ++VGIITRG++++
Sbjct: 134 E-DNRVVGIITRGDIIKG 150
>gi|316935762|ref|YP_004110744.1| hypothetical protein [Rhodopseudomonas palustris DX-1]
gi|315603476|gb|ADU46011.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
DX-1]
Length = 142
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V T+ E + +PV++D +++G+V+ YD L +
Sbjct: 8 TVADHMT--RAVKAVSRELTMRELEDKFEHDDFNAYPVVED-QRVIGMVTKYDFLNCFAF 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ M P D L+++T VGD+M+ + V T L +L+
Sbjct: 65 HPT-----QMLPHYDD----------LMNRT----VGDIMSADFLYVHSDTKLTRVLQLM 105
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+E + R +PV+DAD KL GII+R +V++A
Sbjct: 106 VEHQTRSIPVLDADRKLDGIISREDVIKA 134
>gi|315226962|ref|ZP_07868750.1| EmrB/QacA family drug resistance transporter [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|315121094|gb|EFT84226.1| EmrB/QacA family drug resistance transporter [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 413
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
+ K E++ + T T +A+ + EK+I+G PV+++ +LVG VSD D+L+ +++
Sbjct: 270 LMMKAEVYTLPATATALDAMRLFTEKKISGAPVVNEQGELVGFVSDGDVLS--TLAEQHP 327
Query: 149 ADNSMFPEV-DSTWKTFN-EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
S + V +S ++F+ ++ +LLS V + T + ++ +++++
Sbjct: 328 QFTSFYAAVIESNGESFDKKLDELLSLP----VDRISTKHVITADANDSMPHICQVMVQR 383
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRAAL 234
+++PV+D G++VGI+ R N++R A+
Sbjct: 384 HLKKVPVMD-QGRMVGILNRSNILRYAV 410
>gi|92117457|ref|YP_577186.1| hypothetical protein Nham_1918 [Nitrobacter hamburgensis X14]
gi|91800351|gb|ABE62726.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
X14]
Length = 146
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV +MT K + V T+DE + +PV+D ++VGLV+ +D L ++
Sbjct: 8 TVDRYMTRK--VKTVSREVTMDELNGLFASDDFNAYPVVDQS-EVVGLVTKFDFLKCFAL 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ S SM P D K + V D+M + V TT L +L+
Sbjct: 65 TVS-----SMVPRYDELMK--------------RTVSDVMIHDFIYVNATTKLVRVLQLM 105
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+E + R +PV+D LVGII R +V+RA
Sbjct: 106 VEHRLRSIPVMDTGQHLVGIIAREDVMRA 134
>gi|343524583|ref|ZP_08761541.1| CBS domain protein [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|343398232|gb|EGV10765.1| CBS domain protein [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|149010620|ref|ZP_01831991.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP19-BS75]
gi|418166367|ref|ZP_12803023.1| CBS domain pair family protein [Streptococcus pneumoniae GA17971]
gi|418188980|ref|ZP_12825495.1| CBS domain pair family protein [Streptococcus pneumoniae GA47373]
gi|419442244|ref|ZP_13982275.1| CBS domain protein [Streptococcus pneumoniae GA13224]
gi|421210706|ref|ZP_15667694.1| CBS domain pair family protein [Streptococcus pneumoniae 2070035]
gi|421231520|ref|ZP_15688167.1| CBS domain pair family protein [Streptococcus pneumoniae 2080076]
gi|147765101|gb|EDK72030.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP19-BS75]
gi|353829963|gb|EHE10093.1| CBS domain pair family protein [Streptococcus pneumoniae GA17971]
gi|353856122|gb|EHE36091.1| CBS domain pair family protein [Streptococcus pneumoniae GA47373]
gi|379554211|gb|EHZ19291.1| CBS domain protein [Streptococcus pneumoniae GA13224]
gi|395574579|gb|EJG35156.1| CBS domain pair family protein [Streptococcus pneumoniae 2070035]
gi|395596619|gb|EJG56835.1| CBS domain pair family protein [Streptococcus pneumoniae 2080076]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|419849921|ref|ZP_14372942.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 35B]
gi|419853424|ref|ZP_14376246.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 2-2B]
gi|386407953|gb|EIJ22897.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 2-2B]
gi|386410650|gb|EIJ25427.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 35B]
Length = 683
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ + +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGNGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|209522111|ref|ZP_03270759.1| CBS domain containing membrane protein [Burkholderia sp. H160]
gi|209497447|gb|EDZ97654.1| CBS domain containing membrane protein [Burkholderia sp. H160]
Length = 230
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 24/156 (15%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ EA +LVE I PV+D++ ++VG+V + DLL R +N
Sbjct: 16 PDMTIHEAATLLVENHIGSMPVVDENGQVVGIVGERDLLH--------RVENGTCHRKRQ 67
Query: 160 TWKTFNEVQKLLS----------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
W ++ LLS K +G++VGD+M + + L+ A L+ +
Sbjct: 68 WW-----LELLLSSPRAQAARYMKEHGRVVGDVMCEEVISISGDMPLQQIADLMERRRLD 122
Query: 210 RLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+PV+ + G L+G ++R N++RA ++ E+ ++
Sbjct: 123 SVPVLKS-GTLIGNLSRSNLIRALARVAPVVELASR 157
>gi|322690887|ref|YP_004220457.1| transport protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|320455743|dbj|BAJ66365.1| putative transport protein [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 683
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ + +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGNGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG+LVG+I R +
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKS 668
Query: 229 VVRAAL 234
V+ A
Sbjct: 669 VMEHAF 674
>gi|255659629|ref|ZP_05405038.1| CBS domain protein [Mitsuokella multacida DSM 20544]
gi|260848191|gb|EEX68198.1| CBS domain protein [Mitsuokella multacida DSM 20544]
Length = 149
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT +++ VK ++ E + +V++ ++G PV+DDD + G+VS+ DL+
Sbjct: 3 VKDIMT--KDVVTVKKDASIREIAQTIVDRDVSGLPVVDDDGTVCGIVSEGDLVR----- 55
Query: 145 GSGRADNSMFPEVDST---------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
PE+ + E Q K LMT + V+ +
Sbjct: 56 ------KEFAPELPDELCILGAVIYYSGLREYQDAFRKIAAISAEQLMTKKLISVKPDDD 109
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ A++L E +R+PV+D + L+GI++R ++V+ L
Sbjct: 110 VSKVAKILYEKHIKRVPVLDDEKHLLGIVSRRDIVKMML 148
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT V V++ ++ + A+ +++ LPVVD DG + GI++ G++VR
Sbjct: 2 LVKDIMTKDVVTVKKDASIREIAQTIVDRDVSGLPVVDDDGTVCGIVSEGDLVR 55
>gi|329896780|ref|ZP_08271717.1| CBS domain protein [gamma proteobacterium IMCC3088]
gi|328921581|gb|EGG28960.1| CBS domain protein [gamma proteobacterium IMCC3088]
Length = 127
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 28/140 (20%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA--LDSISGSGRADNSMFP 155
+ + ++ +A++I+V+ ++TG VID+ +VG++S+ D L L+SI G D+ +
Sbjct: 8 ISESASIAQAVQIIVDNKLTGITVIDEHGVVVGVLSEIDCLKAILNSIYNDGDPDHRLVN 67
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
E +T KL + TP+ +V + A+ +LET+ RR PV++
Sbjct: 68 EFMTT--------KL----------NTCTPSDSIV-------EVAQSMLETQQRRRPVLE 102
Query: 216 ADGKLVGIITRGNVVRAALQ 235
DGKLVG ++ GNV+ A ++
Sbjct: 103 -DGKLVGQVSSGNVLWALME 121
>gi|222111943|ref|YP_002554207.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221731387|gb|ACM34207.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 226
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 21/174 (12%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118
LR AV A A P + VGD MT V P V++A + L E I
Sbjct: 63 LRLLEAVSAYVQTEQGPAQPRQPLSRVGDVMTRGA--LTVAPDQRVNDAWQTLAEHEIAQ 120
Query: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178
PV++D ++VGL+ D+ LD + PE + + ++ +S+
Sbjct: 121 APVVNDQGQVVGLLLRADMAPLD-----------LLPEPGAVKQAIELARRPVSEV---- 165
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++P P V +T L A +LL+T LPV D G L G I+R +++RA
Sbjct: 166 ---MVSPVPTVAADT-ELRRVAGVLLDTGLPGLPVTDERGLLAGFISRTDILRA 215
>gi|423069005|ref|ZP_17057793.1| hypothetical protein HMPREF9682_01014 [Streptococcus intermedius
F0395]
gi|355365405|gb|EHG13128.1| hypothetical protein HMPREF9682_01014 [Streptococcus intermedius
F0395]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|381162085|ref|ZP_09871315.1| CBS-domain-containing membrane protein [Saccharomonospora azurea
NA-128]
gi|379253990|gb|EHY87916.1| CBS-domain-containing membrane protein [Saccharomonospora azurea
NA-128]
Length = 204
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + V P V +A +L E T PV+D+ ++VG+V++ D++A
Sbjct: 5 DIMTTP--VVTVSPDDPVKKATRLLAEHGFTALPVVDEGDRVVGIVTEADVVA------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
GR P D+ ++T V ++MT +P ++ T++ + LLE
Sbjct: 56 GR-----VPP-DARYRTGAAAAPTTDARES--VAEIMTTSPTCTQQGTDVAELVGTLLEG 107
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
YR +PV+ A KLVG++TR +VVRA
Sbjct: 108 HYRAVPVL-AGSKLVGVVTRSDVVRA 132
>gi|15902708|ref|NP_358258.1| acetoin utilization protein AcuB, [Streptococcus pneumoniae R6]
gi|116516866|ref|YP_816151.1| acetoin utilization protein AcuB [Streptococcus pneumoniae D39]
gi|148992416|ref|ZP_01822111.1| hypothetical protein CGSSp9BS68_08357 [Streptococcus pneumoniae
SP9-BS68]
gi|168488422|ref|ZP_02712621.1| AcuB family protein [Streptococcus pneumoniae SP195]
gi|182683674|ref|YP_001835421.1| acetoin utilization protein AcuB [Streptococcus pneumoniae CGSP14]
gi|303255831|ref|ZP_07341872.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae BS455]
gi|387759012|ref|YP_006065990.1| hypothetical protein SPNINV200_06660 [Streptococcus pneumoniae
INV200]
gi|417678741|ref|ZP_12328138.1| CBS domain pair family protein [Streptococcus pneumoniae GA17570]
gi|418199711|ref|ZP_12836158.1| CBS domain pair family protein [Streptococcus pneumoniae GA47976]
gi|418233945|ref|ZP_12860525.1| CBS domain pair family protein [Streptococcus pneumoniae GA08780]
gi|419495050|ref|ZP_14034770.1| CBS domain protein [Streptococcus pneumoniae GA47461]
gi|419507819|ref|ZP_14047473.1| CBS domain protein [Streptococcus pneumoniae GA49542]
gi|419514310|ref|ZP_14053938.1| CBS domain protein [Streptococcus pneumoniae England14-9]
gi|419523033|ref|ZP_14062614.1| CBS domain protein [Streptococcus pneumoniae GA13723]
gi|421217247|ref|ZP_15674148.1| CBS domain pair family protein [Streptococcus pneumoniae 2070335]
gi|421219938|ref|ZP_15676793.1| CBS domain pair family protein [Streptococcus pneumoniae 2070425]
gi|421222269|ref|ZP_15679063.1| CBS domain pair family protein [Streptococcus pneumoniae 2070531]
gi|421265784|ref|ZP_15716667.1| CBS domain protein [Streptococcus pneumoniae SPAR27]
gi|421267958|ref|ZP_15718830.1| CBS domain protein [Streptococcus pneumoniae SPAR95]
gi|421278519|ref|ZP_15729329.1| CBS domain protein [Streptococcus pneumoniae GA17301]
gi|421293643|ref|ZP_15744367.1| CBS domain pair family protein [Streptococcus pneumoniae GA56113]
gi|421302564|ref|ZP_15753229.1| CBS domain pair family protein [Streptococcus pneumoniae GA17484]
gi|15458251|gb|AAK99468.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077442|gb|ABJ55162.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae D39]
gi|147928733|gb|EDK79746.1| hypothetical protein CGSSp9BS68_08357 [Streptococcus pneumoniae
SP9-BS68]
gi|182629008|gb|ACB89956.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae CGSP14]
gi|183573030|gb|EDT93558.1| AcuB family protein [Streptococcus pneumoniae SP195]
gi|301801601|emb|CBW34299.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
gi|302597215|gb|EFL64320.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae BS455]
gi|332073120|gb|EGI83599.1| CBS domain pair family protein [Streptococcus pneumoniae GA17570]
gi|353866389|gb|EHE46291.1| CBS domain pair family protein [Streptococcus pneumoniae GA47976]
gi|353889384|gb|EHE69155.1| CBS domain pair family protein [Streptococcus pneumoniae GA08780]
gi|379558572|gb|EHZ23605.1| CBS domain protein [Streptococcus pneumoniae GA13723]
gi|379597414|gb|EHZ62217.1| CBS domain protein [Streptococcus pneumoniae GA47461]
gi|379612664|gb|EHZ77381.1| CBS domain protein [Streptococcus pneumoniae GA49542]
gi|379638800|gb|EIA03345.1| CBS domain protein [Streptococcus pneumoniae England14-9]
gi|395584733|gb|EJG45125.1| CBS domain pair family protein [Streptococcus pneumoniae 2070335]
gi|395589593|gb|EJG49911.1| CBS domain pair family protein [Streptococcus pneumoniae 2070531]
gi|395590013|gb|EJG50328.1| CBS domain pair family protein [Streptococcus pneumoniae 2070425]
gi|395868520|gb|EJG79637.1| CBS domain protein [Streptococcus pneumoniae SPAR27]
gi|395871382|gb|EJG82488.1| CBS domain protein [Streptococcus pneumoniae SPAR95]
gi|395881891|gb|EJG92939.1| CBS domain protein [Streptococcus pneumoniae GA17301]
gi|395894975|gb|EJH05951.1| CBS domain pair family protein [Streptococcus pneumoniae GA56113]
gi|395903378|gb|EJH14310.1| CBS domain pair family protein [Streptococcus pneumoniae GA17484]
Length = 218
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|154150926|ref|YP_001404544.1| signal transduction protein [Methanoregula boonei 6A8]
gi|153999478|gb|ABS55901.1| putative signal transduction protein with CBS domains
[Methanoregula boonei 6A8]
Length = 282
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 37/158 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT+ + +HV P D+ L+IL I+G PV+ + KLVG+++ DLL
Sbjct: 3 VKDYMTS-DVVHVDIPGNR-DDVLKILKRTGISGVPVLKNK-KLVGIITRKDLL------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
K +G LMT P+ + ++ +AARLL+
Sbjct: 54 ---------------------------RKPEETQLGLLMTSKPITIGPDADIREAARLLV 86
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 242
+ RRLPVV+ D KL+G+I+ +++ A Q+K E+
Sbjct: 87 SHRIRRLPVVE-DNKLIGLISVADLIHAIAQMKIKDEI 123
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 81 GVYTVGDFMTTKEELHV----------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130
G+ T D + EE + + P + EA +LV RI PV++D+ KL+G
Sbjct: 45 GIITRKDLLRKPEETQLGLLMTSKPITIGPDADIREAARLLVSHRIRRLPVVEDN-KLIG 103
Query: 131 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
L+S DL+ + K +E++ L + T + D TP P+V
Sbjct: 104 LISVADLI-----------------HAIAQMKIKDEIKDLYTSTTFALWED--TPLPLV- 143
Query: 191 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
R++ + +P++++D L GII+ +++R +
Sbjct: 144 ---------GRVMEISGVDAIPILNSDSVLQGIISERDLIRHS 177
>gi|374299965|ref|YP_005051604.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552901|gb|EGJ49945.1| CBS domain containing membrane protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 223
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D+M T + + P ++ +A ++L +K I PV+DD KL+G++SD D+
Sbjct: 3 IKDWMNT--PVITIGPDESMMKASKLLKDKNIRRLPVVDDTGKLIGILSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D +E+ LLS+ V D+MT PV ++ ++E AA LL
Sbjct: 54 --KEASPSKATTLD-----VHELYYLLSEIK---VKDIMTKNPVRLKAEDSVEKAAVLLS 103
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
E LP+VD + +VGIIT ++ ++I + G Q
Sbjct: 104 EKSLGGLPIVDDNDSVVGIITEKDMFDILIEITRVRDGGVQ 144
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
++ D M + + ++ A++LL + RRLPVVD GKL+GI++ ++ A+
Sbjct: 2 LIKDWMNTPVITIGPDESMMKASKLLKDKNIRRLPVVDDTGKLIGILSDRDIKEAS 57
>gi|432342033|ref|ZP_19591340.1| hypothetical protein Rwratislav_33501, partial [Rhodococcus
wratislaviensis IFP 2016]
gi|430772939|gb|ELB88660.1| hypothetical protein Rwratislav_33501, partial [Rhodococcus
wratislaviensis IFP 2016]
Length = 173
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + VV+ + ++ A +L E PV+DD +LVG+++ D+L RA
Sbjct: 11 QRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RAGT 61
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + + VG++MT V L D +++LL R L
Sbjct: 62 A----------------------SSETVGEVMTAPAVAAPMYQYLADVSKMLLHQGLRSL 99
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
PVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 100 PVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 133
>gi|313127605|ref|YP_004037875.1| zn-dependent protease [Halogeometricum borinquense DSM 11551]
gi|448285375|ref|ZP_21476619.1| zn-dependent protease [Halogeometricum borinquense DSM 11551]
gi|312293970|gb|ADQ68430.1| Zn-dependent protease [Halogeometricum borinquense DSM 11551]
gi|445576945|gb|ELY31392.1| zn-dependent protease [Halogeometricum borinquense DSM 11551]
Length = 391
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +E+L VV T++ E L+ + +R TG+PV+ + +LVG+V+ D
Sbjct: 248 TVRDVMTPREKLDVVDIRTSISELLDRMFYERHTGYPVVQNG-RLVGMVTLNDA------ 300
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+T +EV++ M G+L T +P + + DA +
Sbjct: 301 ------------------RTVDEVERDAYIVKDVMSGELTTISP-----SADAMDAITTM 337
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ RLPVVD +G+LVG+I+R ++V A
Sbjct: 338 QQNGVGRLPVVDDEGELVGLISRSDLVTA 366
>gi|23011539|ref|ZP_00051869.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 30/144 (20%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TVDEA+ +L EK+I V D ++G++S+ D++ + G+ D S
Sbjct: 17 VPPHRTVDEAIHLLAEKQIGALVVADAGGHVIGILSERDVMRALARDGAAALDQS----- 71
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ MT V ++ED + E ++R LPVV+ D
Sbjct: 72 ---------------------ISHYMTAKVVTCTRRASIEDVMETMTEGRFRHLPVVE-D 109
Query: 218 GKLVGIITRGNVVR---AALQIKH 238
G LVG+++ G+VV+ AA++ +H
Sbjct: 110 GHLVGVVSIGDVVKRRIAAVEAEH 133
>gi|339061855|ref|ZP_08649053.1| Inosine monophosphate dehydrogenase-related protein [gamma
proteobacterium IMCC2047]
gi|330720118|gb|EGG98524.1| Inosine monophosphate dehydrogenase-related protein [gamma
proteobacterium IMCC2047]
Length = 137
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 28/159 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + L +P T + EA+E L I+G PVID + +LVGL+S+ D LD+I
Sbjct: 7 VRDYMTKR--LVTFRPETDLFEAIEALKTNGISGAPVIDGNEQLVGLLSEGD--CLDAI- 61
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
++ + G V D MT + ++ D A
Sbjct: 62 ----------------------IKDIYYTEAGGKVSDYMTTDVATISPEDDIVDVAVEFK 99
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ +R PV+D DG+LVG I++ +++RA L I E G
Sbjct: 100 KRGLKRFPVID-DGELVGQISQRDILRAVLDITQHPEHG 137
>gi|167630428|ref|YP_001680927.1| acetoin utilization protein, subunit b [Heliobacterium
modesticaldum Ice1]
gi|167593168|gb|ABZ84916.1| acetoin utilization protein, subunit b [Heliobacterium
modesticaldum Ice1]
Length = 212
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 25/148 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M +++VV P TTV EAL + +KR+ PV+ D+ +L+G++SD DL D
Sbjct: 3 VEDIMV--RQVYVVGPETTVLEALTLAEQKRVRHLPVV-DEGRLLGIISDRDL--RDVKP 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
ADN ++LS T V D++ + + V +EDAA++L
Sbjct: 58 SILEADNL----------------EILSTTR---VKDIVHTSIITVHPLDAIEDAAKMLY 98
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ + LPVV A GKLVGIIT +++ A
Sbjct: 99 DHRIGCLPVVQA-GKLVGIITTTDLLHA 125
>gi|294101728|ref|YP_003553586.1| hypothetical protein [Aminobacterium colombiense DSM 12261]
gi|293616708|gb|ADE56862.1| CBS domain containing membrane protein [Aminobacterium colombiense
DSM 12261]
Length = 150
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDS 142
+GD M +L V T + EA+E+L + +TG PV+D+ LVG +S+ D++ +L S
Sbjct: 3 IGDLMD--RDLTSVTENTPLKEAIEMLSQHNLTGLPVVDEMGFLVGFISEKDIIKASLPS 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ P+ F+++ + L K + VG MT + E + AA
Sbjct: 61 YCEYLEKGAAFIPD-------FDQLSEKLRKKGMEPVGKYMTRKVIYFSEEDSDLHAALS 113
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
L++ + PVV DG VGI++R +++ +
Sbjct: 114 LIQQGLKMAPVVREDGVFVGIVSRAHLIEHIM 145
>gi|197119665|ref|YP_002140092.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089025|gb|ACH40296.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
Length = 216
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 18/139 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P +V EAL ++ +K+I PV++ KLVG+VSD DL + A
Sbjct: 14 ITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQASPSPATSLA-------- 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W E+ LL+K V M + V E T LE+AAR++++ + LPV+ D
Sbjct: 66 --IW----EIHDLLAKLT---VDKTMATDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD 116
Query: 218 GKLVGIITRGNVVRAALQI 236
LVGIIT ++ +A L++
Sbjct: 117 A-LVGIITESDLFQALLEL 134
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+V D MTP P+ + ++ +A RL+ + K RRLPVV+ GKLVGI++ ++ +A+
Sbjct: 2 LVRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQAS 57
>gi|367478289|ref|ZP_09477602.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365269403|emb|CCD90070.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 249
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 32/147 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P T V EA I++ I G PV+D +LVG+V+D D L LD +
Sbjct: 14 VTPGTPVAEAARIMLRNHIGGLPVVDASGRLVGMVTDGDFLRRAELGTERKQGRWLDLLV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + ++G+ VGD+M+ V V +L + A ++
Sbjct: 74 GRGR------------------IAADFVHSHGRTVGDIMSRPAVTVSTDASLAELAEIME 115
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVR 231
+ +RLPVV+ D +L G++T + V+
Sbjct: 116 KRSIKRLPVVNGD-QLAGMVTHTDFVQ 141
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+MT + + V T + +AAR++L LPVVDA G+LVG++T G+ +R A
Sbjct: 6 IMTRSVITVTPGTPVAEAARIMLRNHIGGLPVVDASGRLVGMVTDGDFLRRA 57
>gi|309792767|ref|ZP_07687211.1| CBS domain-containing protein [Oscillochloris trichoides DG-6]
gi|308225177|gb|EFO78961.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
Length = 419
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135
+ P G TVGD M ++ V AL +L++ R++ P+ D++ +LVGL+S+
Sbjct: 112 SGPLKGDRTVGDVM--RKPAPTAASEANVSTALALLIKHRLSALPISDEEGRLVGLLSEQ 169
Query: 136 DL---LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
+L L L R ++F + T +E L++ + + ++M+ P V
Sbjct: 170 ELAWRLGL-------RLPLNLFGHL-----TPDERDTLVAPRINRPLREVMSAEPRSVSI 217
Query: 193 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
T+L A ++E Y +PVVD +GK+VGII + +V+R ++
Sbjct: 218 FTSLPQALVTMVEWGYPHVPVVDREGKVVGIIGQEDVLRVVVE 260
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ P P VR + AA+ LLE + LPVVD++ +L+GII RG +VRA LQ
Sbjct: 363 FVQPDPPTVRPEMPISQAAQRLLELGHESLPVVDSEQRLLGIIARGGLVRAILQ 416
>gi|312868294|ref|ZP_07728494.1| CBS domain protein [Streptococcus parasanguinis F0405]
gi|419800405|ref|ZP_14325686.1| CBS domain protein [Streptococcus parasanguinis F0449]
gi|311096039|gb|EFQ54283.1| CBS domain protein [Streptococcus parasanguinis F0405]
gi|385695118|gb|EIG25688.1| CBS domain protein [Streptococcus parasanguinis F0449]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGLV++ + S
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGLVTEG---TIAEAS 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S S+F E+ LL+KT V D+M + V + +LEDA L+
Sbjct: 57 PSKATSLSIF-----------EMNYLLNKTK---VKDVMLRDVITVSKFASLEDATYLMY 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD D ++ G+IT ++ RA L++ E G +
Sbjct: 103 KNKVGILPVVDND-QVSGVITDRDIFRAFLEVSGYGEEGVR 142
>gi|376296935|ref|YP_005168165.1| hypothetical protein DND132_2157 [Desulfovibrio desulfuricans
ND132]
gi|323459497|gb|EGB15362.1| CBS domain containing protein [Desulfovibrio desulfuricans ND132]
Length = 225
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 17/145 (11%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
++V +A EIL EK I FPVID LVG+VSD D+ A S F D+
Sbjct: 17 NSSVLDAAEILREKNIRQFPVIDSAGSLVGIVSDRDIR---------DAMPSKFIPGDAV 67
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
++ + L + GD+MT P+ V + + A LL++ K LPVVD G+L
Sbjct: 68 VESGGGLYTLTA-------GDIMTLDPISVPSDAAMTEVADLLVKHKVGGLPVVDG-GRL 119
Query: 221 VGIITRGNVVRAALQIKHATEMGAQ 245
GIIT+ +V+R + GAQ
Sbjct: 120 EGIITQLDVLRFLCASAGSARGGAQ 144
>gi|206901430|ref|YP_002250654.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
gi|206740533|gb|ACI19591.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
Length = 214
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA +I+ +I ++ D KLVG+V++ DL S+S S S+F
Sbjct: 14 VSPDTSILEAWKIMQNSQIRRL-LVRDKGKLVGIVTERDL---RSVSPSQATSLSIF--- 66
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
E+ LL K V D MTP P+ V +E+AA ++ + K LPV++ +
Sbjct: 67 --------EINYLLEKLK---VKDAMTPNPITVDADAPIEEAALIMRDNKISALPVIE-N 114
Query: 218 GKLVGIITRGNVVRAALQI 236
G++VGIIT ++ RA +++
Sbjct: 115 GEVVGIITESDIFRAFIEM 133
>gi|407004025|gb|EKE20499.1| IMP dehydrogenase [uncultured bacterium]
Length = 151
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 20/160 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT +++ V TTV+ +IL ++RI G PV+D D K++G+V++ + A
Sbjct: 3 VKDIMT--KDVIFVFDHTTVNNVADILTKERIHGVPVVDKDRKVIGIVTETNFFA----- 55
Query: 145 GSGRADNSMFPEVDSTWKTFN-----EVQKLLSKTNGKM---VGDLMTPAPVVVRETTNL 196
+ D ++ + KT +V+ L +K K+ VGD+MT V V +
Sbjct: 56 ---KVDGDLY--LSKFVKTIKKNKLPDVRDLKNKNEIKVETTVGDIMTKNCVTVSPEMKV 110
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
E+ + + + +PVVD +G L GI++ N++ ++++
Sbjct: 111 EELFEVFRKKGFHTIPVVDKNGILEGIVSLANIIAISVKL 150
>gi|148985896|ref|ZP_01818990.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP3-BS71]
gi|148989833|ref|ZP_01821127.1| hypothetical protein CGSSp6BS73_01563 [Streptococcus pneumoniae
SP6-BS73]
gi|148997170|ref|ZP_01824824.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP11-BS70]
gi|168490841|ref|ZP_02714984.1| AcuB family protein [Streptococcus pneumoniae CDC0288-04]
gi|168492903|ref|ZP_02717046.1| AcuB family protein [Streptococcus pneumoniae CDC3059-06]
gi|168575413|ref|ZP_02721349.1| AcuB family protein [Streptococcus pneumoniae MLV-016]
gi|169833130|ref|YP_001694216.1| AcuB family protein [Streptococcus pneumoniae Hungary19A-6]
gi|194398244|ref|YP_002037400.1| acetoin utilization protein AcuB [Streptococcus pneumoniae G54]
gi|225854262|ref|YP_002735774.1| AcuB family protein [Streptococcus pneumoniae JJA]
gi|225856430|ref|YP_002737941.1| AcuB family protein [Streptococcus pneumoniae P1031]
gi|307067357|ref|YP_003876323.1| hypothetical protein SPAP_0728 [Streptococcus pneumoniae AP200]
gi|387757182|ref|YP_006064161.1| hypothetical protein SPNOXC_06830 [Streptococcus pneumoniae OXC141]
gi|405760922|ref|YP_006701518.1| hypothetical protein SPNA45_01081 [Streptococcus pneumoniae SPNA45]
gi|410476197|ref|YP_006742956.1| acetoin utilization protein AcuB [Streptococcus pneumoniae
gamPNI0373]
gi|417686196|ref|ZP_12335474.1| CBS domain pair family protein [Streptococcus pneumoniae GA41301]
gi|417698177|ref|ZP_12347350.1| CBS domain pair family protein [Streptococcus pneumoniae GA41317]
gi|418074093|ref|ZP_12711349.1| CBS domain pair family protein [Streptococcus pneumoniae GA11184]
gi|418075862|ref|ZP_12713101.1| CBS domain pair family protein [Streptococcus pneumoniae GA47502]
gi|418078244|ref|ZP_12715467.1| CBS domain pair family protein [Streptococcus pneumoniae 4027-06]
gi|418080196|ref|ZP_12717411.1| CBS domain pair family protein [Streptococcus pneumoniae 6735-05]
gi|418086492|ref|ZP_12723663.1| CBS domain pair family protein [Streptococcus pneumoniae GA47033]
gi|418089145|ref|ZP_12726303.1| CBS domain pair family protein [Streptococcus pneumoniae GA43265]
gi|418098119|ref|ZP_12735219.1| CBS domain pair family protein [Streptococcus pneumoniae 6901-05]
gi|418104801|ref|ZP_12741861.1| CBS domain pair family protein [Streptococcus pneumoniae GA44500]
gi|418114239|ref|ZP_12751230.1| CBS domain pair family protein [Streptococcus pneumoniae 5787-06]
gi|418116477|ref|ZP_12753451.1| CBS domain pair family protein [Streptococcus pneumoniae 6963-05]
gi|418120831|ref|ZP_12757777.1| CBS domain pair family protein [Streptococcus pneumoniae GA44194]
gi|418129921|ref|ZP_12766805.1| CBS domain pair family protein [Streptococcus pneumoniae GA07643]
gi|418134485|ref|ZP_12771343.1| CBS domain pair family protein [Streptococcus pneumoniae GA11426]
gi|418148185|ref|ZP_12784950.1| CBS domain pair family protein [Streptococcus pneumoniae GA13856]
gi|418159396|ref|ZP_12796098.1| CBS domain pair family protein [Streptococcus pneumoniae GA17227]
gi|418173114|ref|ZP_12809728.1| CBS domain pair family protein [Streptococcus pneumoniae GA41277]
gi|418186761|ref|ZP_12823291.1| CBS domain pair family protein [Streptococcus pneumoniae GA47360]
gi|418202030|ref|ZP_12838460.1| CBS domain pair family protein [Streptococcus pneumoniae GA52306]
gi|418216202|ref|ZP_12842926.1| CBS domain pair family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418229493|ref|ZP_12856100.1| CBS domain pair family protein [Streptococcus pneumoniae EU-NP01]
gi|418231821|ref|ZP_12858409.1| CBS domain pair family protein [Streptococcus pneumoniae GA07228]
gi|418236120|ref|ZP_12862689.1| CBS domain pair family protein [Streptococcus pneumoniae GA19690]
gi|419431152|ref|ZP_13971298.1| CBS domain protein [Streptococcus pneumoniae EU-NP05]
gi|419433411|ref|ZP_13973530.1| CBS domain protein [Streptococcus pneumoniae GA40183]
gi|419439963|ref|ZP_13980017.1| CBS domain protein [Streptococcus pneumoniae GA40410]
gi|419452851|ref|ZP_13992825.1| CBS domain protein [Streptococcus pneumoniae EU-NP03]
gi|419455159|ref|ZP_13995119.1| CBS domain protein [Streptococcus pneumoniae EU-NP04]
gi|419464279|ref|ZP_14004172.1| CBS domain protein [Streptococcus pneumoniae GA04175]
gi|419468625|ref|ZP_14008496.1| CBS domain protein [Streptococcus pneumoniae GA06083]
gi|419470716|ref|ZP_14010575.1| CBS domain protein [Streptococcus pneumoniae GA07914]
gi|419477419|ref|ZP_14017244.1| CBS domain protein [Streptococcus pneumoniae GA18068]
gi|419479590|ref|ZP_14019398.1| CBS domain protein [Streptococcus pneumoniae GA19101]
gi|419490683|ref|ZP_14030423.1| CBS domain protein [Streptococcus pneumoniae GA47179]
gi|419492901|ref|ZP_14032628.1| CBS domain protein [Streptococcus pneumoniae GA47210]
gi|419496934|ref|ZP_14036645.1| CBS domain protein [Streptococcus pneumoniae GA47522]
gi|419499283|ref|ZP_14038982.1| CBS domain protein [Streptococcus pneumoniae GA47597]
gi|419503565|ref|ZP_14043236.1| CBS domain protein [Streptococcus pneumoniae GA47760]
gi|419505697|ref|ZP_14045358.1| CBS domain protein [Streptococcus pneumoniae GA49194]
gi|419520693|ref|ZP_14060290.1| CBS domain protein [Streptococcus pneumoniae GA05245]
gi|419531991|ref|ZP_14071509.1| CBS domain protein [Streptococcus pneumoniae GA47794]
gi|419534194|ref|ZP_14073700.1| CBS domain protein [Streptococcus pneumoniae GA17457]
gi|421233753|ref|ZP_15690375.1| CBS domain pair family protein [Streptococcus pneumoniae 2061617]
gi|421235911|ref|ZP_15692512.1| CBS domain pair family protein [Streptococcus pneumoniae 2071004]
gi|421242746|ref|ZP_15699268.1| CBS domain pair family protein [Streptococcus pneumoniae 2081074]
gi|421249057|ref|ZP_15705520.1| CBS domain pair family protein [Streptococcus pneumoniae 2082239]
gi|421270177|ref|ZP_15721034.1| CBS domain protein [Streptococcus pneumoniae SPAR48]
gi|421274665|ref|ZP_15725497.1| CBS domain protein [Streptococcus pneumoniae GA52612]
gi|421280735|ref|ZP_15731534.1| CBS domain pair family protein [Streptococcus pneumoniae GA04672]
gi|421284891|ref|ZP_15735668.1| CBS domain pair family protein [Streptococcus pneumoniae GA60190]
gi|421289396|ref|ZP_15740148.1| CBS domain pair family protein [Streptococcus pneumoniae GA54354]
gi|421304716|ref|ZP_15755372.1| CBS domain pair family protein [Streptococcus pneumoniae GA62331]
gi|421306938|ref|ZP_15757584.1| CBS domain pair family protein [Streptococcus pneumoniae GA60132]
gi|421309182|ref|ZP_15759811.1| CBS domain pair family protein [Streptococcus pneumoniae GA62681]
gi|421313929|ref|ZP_15764519.1| CBS domain pair family protein [Streptococcus pneumoniae GA47562]
gi|444387426|ref|ZP_21185448.1| CBS domain protein [Streptococcus pneumoniae PCS125219]
gi|444390126|ref|ZP_21188041.1| CBS domain protein [Streptococcus pneumoniae PCS70012]
gi|444393052|ref|ZP_21190712.1| CBS domain protein [Streptococcus pneumoniae PCS81218]
gi|444394241|ref|ZP_21191794.1| CBS domain protein [Streptococcus pneumoniae PNI0002]
gi|444397192|ref|ZP_21194679.1| CBS domain protein [Streptococcus pneumoniae PNI0006]
gi|444400045|ref|ZP_21197468.1| CBS domain protein [Streptococcus pneumoniae PNI0007]
gi|444401585|ref|ZP_21198769.1| CBS domain protein [Streptococcus pneumoniae PNI0008]
gi|444405285|ref|ZP_21202198.1| CBS domain protein [Streptococcus pneumoniae PNI0009]
gi|444408867|ref|ZP_21205497.1| CBS domain protein [Streptococcus pneumoniae PNI0010]
gi|444410181|ref|ZP_21206729.1| CBS domain protein [Streptococcus pneumoniae PNI0076]
gi|444411909|ref|ZP_21208235.1| CBS domain protein [Streptococcus pneumoniae PNI0153]
gi|444415015|ref|ZP_21211262.1| CBS domain protein [Streptococcus pneumoniae PNI0199]
gi|444416750|ref|ZP_21212829.1| CBS domain protein [Streptococcus pneumoniae PNI0360]
gi|444419287|ref|ZP_21215160.1| CBS domain protein [Streptococcus pneumoniae PNI0427]
gi|444422598|ref|ZP_21218247.1| CBS domain protein [Streptococcus pneumoniae PNI0446]
gi|147756870|gb|EDK63910.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP11-BS70]
gi|147922042|gb|EDK73166.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP3-BS71]
gi|147924775|gb|EDK75859.1| hypothetical protein CGSSp6BS73_01563 [Streptococcus pneumoniae
SP6-BS73]
gi|168995632|gb|ACA36244.1| AcuB family protein [Streptococcus pneumoniae Hungary19A-6]
gi|183574557|gb|EDT95085.1| AcuB family protein [Streptococcus pneumoniae CDC0288-04]
gi|183576974|gb|EDT97502.1| AcuB family protein [Streptococcus pneumoniae CDC3059-06]
gi|183578468|gb|EDT98996.1| AcuB family protein [Streptococcus pneumoniae MLV-016]
gi|194357911|gb|ACF56359.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae G54]
gi|225723390|gb|ACO19243.1| AcuB family protein [Streptococcus pneumoniae JJA]
gi|225724721|gb|ACO20573.1| AcuB family protein [Streptococcus pneumoniae P1031]
gi|301799771|emb|CBW32340.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
gi|306408894|gb|ADM84321.1| CBS domain protein [Streptococcus pneumoniae AP200]
gi|332076033|gb|EGI86499.1| CBS domain pair family protein [Streptococcus pneumoniae GA41301]
gi|332202618|gb|EGJ16687.1| CBS domain pair family protein [Streptococcus pneumoniae GA41317]
gi|353747435|gb|EHD28091.1| CBS domain pair family protein [Streptococcus pneumoniae 4027-06]
gi|353749593|gb|EHD30237.1| CBS domain pair family protein [Streptococcus pneumoniae GA11184]
gi|353749651|gb|EHD30294.1| CBS domain pair family protein [Streptococcus pneumoniae GA47502]
gi|353753807|gb|EHD34423.1| CBS domain pair family protein [Streptococcus pneumoniae 6735-05]
gi|353759755|gb|EHD40338.1| CBS domain pair family protein [Streptococcus pneumoniae GA47033]
gi|353762832|gb|EHD43390.1| CBS domain pair family protein [Streptococcus pneumoniae GA43265]
gi|353770484|gb|EHD50997.1| CBS domain pair family protein [Streptococcus pneumoniae 6901-05]
gi|353779235|gb|EHD59701.1| CBS domain pair family protein [Streptococcus pneumoniae GA44500]
gi|353787537|gb|EHD67939.1| CBS domain pair family protein [Streptococcus pneumoniae 5787-06]
gi|353790315|gb|EHD70698.1| CBS domain pair family protein [Streptococcus pneumoniae 6963-05]
gi|353793658|gb|EHD74017.1| CBS domain pair family protein [Streptococcus pneumoniae GA44194]
gi|353803213|gb|EHD83505.1| CBS domain pair family protein [Streptococcus pneumoniae GA07643]
gi|353812860|gb|EHD93093.1| CBS domain pair family protein [Streptococcus pneumoniae GA13856]
gi|353824748|gb|EHE04916.1| CBS domain pair family protein [Streptococcus pneumoniae GA17227]
gi|353839813|gb|EHE19887.1| CBS domain pair family protein [Streptococcus pneumoniae GA41277]
gi|353853347|gb|EHE33330.1| CBS domain pair family protein [Streptococcus pneumoniae GA47360]
gi|353867833|gb|EHE47723.1| CBS domain pair family protein [Streptococcus pneumoniae GA52306]
gi|353873253|gb|EHE53114.1| CBS domain pair family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353888127|gb|EHE67903.1| CBS domain pair family protein [Streptococcus pneumoniae GA07228]
gi|353889679|gb|EHE69447.1| CBS domain pair family protein [Streptococcus pneumoniae EU-NP01]
gi|353894049|gb|EHE73794.1| CBS domain pair family protein [Streptococcus pneumoniae GA19690]
gi|353903075|gb|EHE78601.1| CBS domain pair family protein [Streptococcus pneumoniae GA11426]
gi|379539498|gb|EHZ04677.1| CBS domain protein [Streptococcus pneumoniae GA04175]
gi|379540596|gb|EHZ05768.1| CBS domain protein [Streptococcus pneumoniae GA05245]
gi|379545432|gb|EHZ10571.1| CBS domain protein [Streptococcus pneumoniae GA07914]
gi|379546728|gb|EHZ11866.1| CBS domain protein [Streptococcus pneumoniae GA06083]
gi|379566801|gb|EHZ31788.1| CBS domain protein [Streptococcus pneumoniae GA18068]
gi|379567238|gb|EHZ32224.1| CBS domain protein [Streptococcus pneumoniae GA17457]
gi|379573244|gb|EHZ38200.1| CBS domain protein [Streptococcus pneumoniae GA19101]
gi|379577541|gb|EHZ42460.1| CBS domain protein [Streptococcus pneumoniae GA40183]
gi|379580574|gb|EHZ45464.1| CBS domain protein [Streptococcus pneumoniae GA40410]
gi|379594262|gb|EHZ59072.1| CBS domain protein [Streptococcus pneumoniae GA47179]
gi|379594939|gb|EHZ59748.1| CBS domain protein [Streptococcus pneumoniae GA47210]
gi|379601448|gb|EHZ66221.1| CBS domain protein [Streptococcus pneumoniae GA47522]
gi|379602337|gb|EHZ67108.1| CBS domain protein [Streptococcus pneumoniae GA47597]
gi|379607611|gb|EHZ72357.1| CBS domain protein [Streptococcus pneumoniae GA49194]
gi|379608747|gb|EHZ73492.1| CBS domain protein [Streptococcus pneumoniae GA47794]
gi|379609163|gb|EHZ73904.1| CBS domain protein [Streptococcus pneumoniae GA47760]
gi|379627435|gb|EHZ92047.1| CBS domain protein [Streptococcus pneumoniae EU-NP03]
gi|379629616|gb|EHZ94210.1| CBS domain protein [Streptococcus pneumoniae EU-NP04]
gi|379632396|gb|EHZ96972.1| CBS domain protein [Streptococcus pneumoniae EU-NP05]
gi|395602650|gb|EJG62792.1| CBS domain pair family protein [Streptococcus pneumoniae 2061617]
gi|395604830|gb|EJG64962.1| CBS domain pair family protein [Streptococcus pneumoniae 2071004]
gi|395610066|gb|EJG70147.1| CBS domain pair family protein [Streptococcus pneumoniae 2081074]
gi|395615686|gb|EJG75702.1| CBS domain pair family protein [Streptococcus pneumoniae 2082239]
gi|395870829|gb|EJG81942.1| CBS domain protein [Streptococcus pneumoniae SPAR48]
gi|395875393|gb|EJG86474.1| CBS domain protein [Streptococcus pneumoniae GA52612]
gi|395884092|gb|EJG95134.1| CBS domain pair family protein [Streptococcus pneumoniae GA04672]
gi|395886870|gb|EJG97885.1| CBS domain pair family protein [Streptococcus pneumoniae GA60190]
gi|395890656|gb|EJH01662.1| CBS domain pair family protein [Streptococcus pneumoniae GA54354]
gi|395905378|gb|EJH16283.1| CBS domain pair family protein [Streptococcus pneumoniae GA62331]
gi|395908901|gb|EJH19778.1| CBS domain pair family protein [Streptococcus pneumoniae GA60132]
gi|395911926|gb|EJH22790.1| CBS domain pair family protein [Streptococcus pneumoniae GA62681]
gi|395914429|gb|EJH25273.1| CBS domain pair family protein [Streptococcus pneumoniae GA47562]
gi|404277811|emb|CCM08366.1| conserved hypothetical protein [Streptococcus pneumoniae SPNA45]
gi|406369142|gb|AFS42832.1| putative acetoin utilization protein AcuB [Streptococcus pneumoniae
gamPNI0373]
gi|429317613|emb|CCP37401.1| conserved hypothetical protein [Streptococcus pneumoniae SPN034156]
gi|429319155|emb|CCP32394.1| conserved hypothetical protein [Streptococcus pneumoniae SPN034183]
gi|429320970|emb|CCP34368.1| conserved hypothetical protein [Streptococcus pneumoniae SPN994039]
gi|429322790|emb|CCP30409.1| conserved hypothetical protein [Streptococcus pneumoniae SPN994038]
gi|444253300|gb|ELU59758.1| CBS domain protein [Streptococcus pneumoniae PCS125219]
gi|444256589|gb|ELU62927.1| CBS domain protein [Streptococcus pneumoniae PCS70012]
gi|444261308|gb|ELU67612.1| CBS domain protein [Streptococcus pneumoniae PNI0002]
gi|444262423|gb|ELU68721.1| CBS domain protein [Streptococcus pneumoniae PNI0006]
gi|444262498|gb|ELU68794.1| CBS domain protein [Streptococcus pneumoniae PCS81218]
gi|444267431|gb|ELU73334.1| CBS domain protein [Streptococcus pneumoniae PNI0007]
gi|444267909|gb|ELU73792.1| CBS domain protein [Streptococcus pneumoniae PNI0008]
gi|444269161|gb|ELU74976.1| CBS domain protein [Streptococcus pneumoniae PNI0010]
gi|444274648|gb|ELU80293.1| CBS domain protein [Streptococcus pneumoniae PNI0009]
gi|444275241|gb|ELU80868.1| CBS domain protein [Streptococcus pneumoniae PNI0153]
gi|444278112|gb|ELU83588.1| CBS domain protein [Streptococcus pneumoniae PNI0076]
gi|444280815|gb|ELU86166.1| CBS domain protein [Streptococcus pneumoniae PNI0199]
gi|444285219|gb|ELU90300.1| CBS domain protein [Streptococcus pneumoniae PNI0360]
gi|444287130|gb|ELU92071.1| CBS domain protein [Streptococcus pneumoniae PNI0427]
gi|444288026|gb|ELU92929.1| CBS domain protein [Streptococcus pneumoniae PNI0446]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKISILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|451946413|ref|YP_007467008.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
gi|451905761|gb|AGF77355.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
Length = 203
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
E+ V T + EA + + I+G PV+D++ ++VG++S+ D L G + S
Sbjct: 69 EVVSVAANTPLLEAAKRMAAASISGVPVLDNEERVVGVLSEQDFL-----KDLGTNNRSF 123
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ ++ + V + ++ D+M+ P +RE T L + ++ + RLPV
Sbjct: 124 MSIITNSLQGKGCVA---VSSPERVAADIMSHPPFTIRENTPLGEITVIMSKNNINRLPV 180
Query: 214 VDADG-KLVGIITRGNVVRAAL 234
+D G K+VGI++RG++VR+ L
Sbjct: 181 LDQQGEKIVGILSRGDIVRSQL 202
>gi|206901405|ref|YP_002250467.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum
H-6-12]
gi|206740508|gb|ACI19566.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum
H-6-12]
Length = 493
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 33/127 (25%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P TV EAL I+ + I+G PV++ D KLVG+V++ DL R + +M
Sbjct: 105 PEQTVGEALSIMAKYHISGLPVVEKDGKLVGIVTNRDL----------RFETNM------ 148
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDADG 218
K V ++MT ++V + ++DA +L + K +LP+VD D
Sbjct: 149 ----------------NKKVSEIMTKDNLIVAQVGITIKDAQEILQKYKIEKLPIVDKDF 192
Query: 219 KLVGIIT 225
KL G+IT
Sbjct: 193 KLRGLIT 199
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK+ L V + T+ +A EIL + +I P++D D+KL GL++ D+
Sbjct: 155 IMTKDNLIVAQVGITIKDAQEILQKYKIEKLPIVDKDFKLRGLITIKDI 203
>gi|86158851|ref|YP_465636.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775362|gb|ABC82199.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 149
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD+MT ++ ++V EA+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLFG---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
P +T + E+ LLSKT V M PAP V T L +AARLL
Sbjct: 60 ---------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAEAARLL 106
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K + VV A G L G++T N + A + A A+
Sbjct: 107 HDRKLNGVIVVSAQGDLEGLLTTTNALEALIHFSGAASASAK 148
>gi|392410019|ref|YP_006446626.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390623155|gb|AFM24362.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 233
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 18/145 (12%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
++ +A+ + E ++ PV+ + +L+G+V+D DL RA S D+T
Sbjct: 17 NASMQDAMVCMKEHKVALLPVMQKN-QLIGVVTDRDL---------KRASAS-----DAT 61
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
+E+ LLS+ V D+M+ PV + LE+AA +LL+ + PV++ DGK+
Sbjct: 62 SLDIHELIYLLSRIK---VSDIMSRKPVTLAPDLTLEEAASILLKNNFSGAPVINGDGKV 118
Query: 221 VGIITRGNVVRAALQIKHATEMGAQ 245
+G+I+ + +A + + + G Q
Sbjct: 119 IGLISNHELFQALISLSGLEQRGVQ 143
>gi|119774127|ref|YP_926867.1| acetoin utilization protein AcuB [Shewanella amazonensis SB2B]
gi|119766627|gb|ABL99197.1| acetoin utilization protein AcuB, putative [Shewanella amazonensis
SB2B]
Length = 140
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 28/153 (18%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAL----EILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
++ D M T+ VV T +D+ L EI + PV+D+D L G++S+ DLL
Sbjct: 4 SIADIMVTR----VV--TVEMDDRLQLVKEIFDQASFHHLPVVDEDGTLSGMLSERDLL- 56
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
++ P + + +T + + LL K V +MT PV + +L+DA
Sbjct: 57 -----------RAISPHIGAIGETNRDQETLL-----KRVHQVMTREPVTIAPHKSLDDA 100
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ L+LE LPV++ DGKLVGIIT +++RA
Sbjct: 101 SLLMLEYSIGSLPVLE-DGKLVGIITWKDLLRA 132
>gi|116748379|ref|YP_845066.1| hypothetical protein Sfum_0935 [Syntrophobacter fumaroxidans MPOB]
gi|116697443|gb|ABK16631.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 225
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + E E+L + PV+D++ +LVG+V+D D+ S P
Sbjct: 14 VGPNDGILETRELLAKSSFRHLPVVDEENRLVGIVTDRDI-------------RSAMP-- 58
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S + NE K + + D+MT PV V LEDA L+ + PVVD +
Sbjct: 59 -SVFLDENETLKERERLAQMKIKDIMTKNPVTVNPANTLEDAILLMQRMRVGAFPVVDRE 117
Query: 218 GKLVGIITRGNVVRAALQIKHATEMG 243
GKL G+++ ++VRA + + E G
Sbjct: 118 GKLRGMLSIRDLVRAFVNVLGLEEPG 143
>gi|149204515|ref|ZP_01881481.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
gi|149142014|gb|EDM30063.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
Length = 231
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 12/152 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISG 145
D MTT + V +++A+ ++++ I+ PV+D + L GLVS+ DL+ + G
Sbjct: 5 DIMTTS--VISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRETDG 62
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
R S + EV +E + K V D+MT V V E TN+ + ARLL +
Sbjct: 63 PRR---SWWLEV---LGGASESAQDFVKLKSHRVEDVMTRDVVSVEEDTNVAEIARLLEK 116
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRA--ALQ 235
+ +R+PVV +D K+VGI++R N++ A ALQ
Sbjct: 117 HRIKRVPVVRSD-KVVGIVSRANLLHALSALQ 147
>gi|406985270|gb|EKE06084.1| IMP dehydrogenase/GMP reductase, partial [uncultured bacterium]
Length = 254
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 34/132 (25%)
Query: 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155
+ + P T+ EA E ++EK I+G V + D KL+G++S D+L
Sbjct: 100 YTINPNRTLSEAKEEIIEKGISGLLVSNGDGKLLGVLSKRDIL----------------- 142
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPV 213
F E + LL V D+MTP +V +TNL +A RLL + + +LP+
Sbjct: 143 --------FAEGEHLL-------VHDMMTPRERLIVGDISTNLGEAKRLLAQHRIEKLPL 187
Query: 214 VDADGKLVGIIT 225
VD + K+VG+IT
Sbjct: 188 VDENNKIVGLIT 199
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V D MT +E L V +T + EA +L + RI P++D++ K+VGL++ D+
Sbjct: 151 VHDMMTPRERLIVGDISTNLGEAKRLLAQHRIEKLPLVDENNKIVGLITSCDI 203
>gi|367474641|ref|ZP_09474136.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273015|emb|CCD86604.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 141
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 20/114 (17%)
Query: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178
+PV+++D +++G+V+ +D+L + + N M P L+++T
Sbjct: 41 YPVVEND-EVIGIVTKFDVLKCFAFTP-----NQMLPRY----------SDLMNRT---- 80
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
VGD+MT + VR T L +L++E + R LPV D D +LVGII R ++VRA
Sbjct: 81 VGDVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDSRLVGIIAREDLVRA 134
>gi|345888479|ref|ZP_08839562.1| hypothetical protein HMPREF0178_02336 [Bilophila sp. 4_1_30]
gi|345040648|gb|EGW44885.1| hypothetical protein HMPREF0178_02336 [Bilophila sp. 4_1_30]
Length = 225
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 20/149 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A +++ + I PV+D ++VG+VSD D+ A A S +
Sbjct: 14 VTPDTSMLKASKLMKDHNIRRLPVLDGK-RVVGIVSDRDIRA---------ASPSKATTL 63
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK-YRRLPVVDA 216
D +E+ LLS+ V D+MT PV V +T + DAA LL+E K LPVVD
Sbjct: 64 D-----MHELYYLLSEVK---VKDIMTSDPVTVYDTDAV-DAAALLMENKGIGGLPVVDG 114
Query: 217 DGKLVGIITRGNVVRAALQIKHATEMGAQ 245
G+LVGIIT ++ R + A++ G Q
Sbjct: 115 SGELVGIITDHDIFRVLVDFCGASKGGLQ 143
>gi|224009930|ref|XP_002293923.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
CCMP1335]
gi|220970595|gb|EED88932.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
CCMP1335]
Length = 132
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + P T+VDEA+ L+ ++G PV++ +LVG VS +D L
Sbjct: 3 VSDLMT--QNPFTLSPQTSVDEAIATLLAAGVSGAPVVEQ-LRLVGFVSSFDFL------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
P +S T E++ + + G+ V D+MT PV V ++ AA +
Sbjct: 54 ----------PREESGLVTLGEMEDSETARRILGQSVKDIMTRNPVSVNTNDLMKTAAEI 103
Query: 203 LLETKYRRLPVVDAD-GKLVGIITRGNVV 230
+ + + LPVVD G LVG+I+ +V+
Sbjct: 104 MAKHRLHVLPVVDVHRGNLVGVISAKDVM 132
>gi|374998002|ref|YP_004973501.1| hypothetical protein Desor_5620 [Desulfosporosinus orientis DSM
765]
gi|357216368|gb|AET70986.1| CBS domain-containing protein [Desulfosporosinus orientis DSM 765]
Length = 208
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 21/152 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V FMT ++ V P+ ++ + + ++ EK+IT PV++ KLVG V+D DL
Sbjct: 3 VRQFMTA--QVFTVNPSESIADTMALMREKKITRMPVVEK-GKLVGFVTDGDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ P +T F E+ L++KT + ++ + R T +EDAA L+
Sbjct: 53 ------REVSPSPATTLSIF-ELNYLIAKTP---IREVAIKKVITCRPDTQIEDAAMLMR 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ K LPVV+ D K+VGIIT +++ A L I
Sbjct: 103 DHKIGGLPVVEGD-KVVGIITGSDILDAFLDI 133
>gi|302336892|ref|YP_003802098.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301634077|gb|ADK79504.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 214
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 18/130 (13%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T V +A+ ++ ++++ PV+D + KLVG+VS+ DLL P ST
Sbjct: 18 TAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYAS-------------PSPASTL 64
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
+ E+ LL++ K V MT + V E T +EDAAR++++ LPV+ DG LV
Sbjct: 65 SVY-EMSALLARLKVKKV---MTKEVITVTEQTLIEDAARIMVDKNVGGLPVM-RDGLLV 119
Query: 222 GIITRGNVVR 231
GIIT ++ +
Sbjct: 120 GIITESDIFK 129
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V +MT P + + T + DA L+ + K RLPV+D + KLVGI++ +++ A+
Sbjct: 3 VSRVMTHNPFTISDDTAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYAS 57
>gi|300692864|ref|YP_003753859.1| hypothetical protein RPSI07_3251 [Ralstonia solanacearum PSI07]
gi|299079924|emb|CBJ52601.1| conserved protein of unknown function
(cystathionine-beta-synthase-CBS domain) [Ralstonia
solanacearum PSI07]
Length = 378
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MT + V T+V AL +L + PV+DD+ +L+G+V+ DL +
Sbjct: 236 TCADIMT--PSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTRADLTGTAAR 293
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ R + W + VG +MTP + +R + D +
Sbjct: 294 ARRQRLRD---------WFAIGAMTP-------PRVGGVMTPRVLTIRADAPMADLVPMF 337
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +PVVDA G+L GI+T+ +++ A
Sbjct: 338 ASAGHHHIPVVDAHGRLAGILTQADIIHA 366
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 168 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D + +L+GI+TR
Sbjct: 225 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTR 284
Query: 227 GNV 229
++
Sbjct: 285 ADL 287
>gi|451981772|ref|ZP_21930117.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
gi|451760982|emb|CCQ91382.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
Length = 150
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA----LDS 142
D MT K + VK T+ E + +E R+ GFPV+DDD L+G+V++ DL+ L
Sbjct: 6 DVMTRK--VVTVKKDLTLRELSNLFLEHRVNGFPVVDDDSVLIGVVTEKDLIEQNKNLHI 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ D ++ E D + +K + + G V D+ + V T++ + A L
Sbjct: 64 PTVIALFDAVIYLESDEKF------EKEVKRFTGTRVEDIFQQNVLTVEPDTDMNEVATL 117
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ LPVV+ GKLVG+I + +V++
Sbjct: 118 MANHDIHTLPVVEG-GKLVGVIGKVDVIKC 146
>gi|221231550|ref|YP_002510702.1| hypothetical protein SPN23F_06770 [Streptococcus pneumoniae ATCC
700669]
gi|415697645|ref|ZP_11456875.1| CBS domain pair family protein [Streptococcus pneumoniae 459-5]
gi|415749160|ref|ZP_11477104.1| CBS domain pair family protein [Streptococcus pneumoniae SV35]
gi|415751842|ref|ZP_11478953.1| CBS domain pair family protein [Streptococcus pneumoniae SV36]
gi|418123018|ref|ZP_12759953.1| CBS domain pair family protein [Streptococcus pneumoniae GA44378]
gi|418127605|ref|ZP_12764501.1| CBS domain pair family protein [Streptococcus pneumoniae NP170]
gi|418136775|ref|ZP_12773618.1| CBS domain pair family protein [Streptococcus pneumoniae GA11663]
gi|418177776|ref|ZP_12814360.1| CBS domain pair family protein [Streptococcus pneumoniae GA41565]
gi|419472808|ref|ZP_14012659.1| CBS domain protein [Streptococcus pneumoniae GA13430]
gi|220674010|emb|CAR68523.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
700669]
gi|353798491|gb|EHD78821.1| CBS domain pair family protein [Streptococcus pneumoniae GA44378]
gi|353800066|gb|EHD80380.1| CBS domain pair family protein [Streptococcus pneumoniae NP170]
gi|353844550|gb|EHE24593.1| CBS domain pair family protein [Streptococcus pneumoniae GA41565]
gi|353902703|gb|EHE78231.1| CBS domain pair family protein [Streptococcus pneumoniae GA11663]
gi|379552315|gb|EHZ17404.1| CBS domain protein [Streptococcus pneumoniae GA13430]
gi|381309538|gb|EIC50371.1| CBS domain pair family protein [Streptococcus pneumoniae SV36]
gi|381317454|gb|EIC58179.1| CBS domain pair family protein [Streptococcus pneumoniae SV35]
gi|381319243|gb|EIC59959.1| CBS domain pair family protein [Streptococcus pneumoniae 459-5]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKISILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|85707037|ref|ZP_01038126.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
gi|85668478|gb|EAQ23350.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
Length = 231
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 12/152 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISG 145
D MTT + V +++A+ ++++ I+ PV+D + L GLVS+ DL+ + G
Sbjct: 5 DIMTTS--VISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRETDG 62
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
R S + EV +E + K V D+MT V V E TN+ + ARLL +
Sbjct: 63 PRR---SWWLEV---LGGASESAQDFVKFKSHRVEDVMTRDVVSVEEDTNVAEIARLLEK 116
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRA--ALQ 235
+ +R+PVV +D K+VGI++R N++ A ALQ
Sbjct: 117 HRIKRVPVVRSD-KVVGIVSRANLLHALSALQ 147
>gi|386724649|ref|YP_006190975.1| hypothetical protein B2K_21315 [Paenibacillus mucilaginosus K02]
gi|384091774|gb|AFH63210.1| hypothetical protein B2K_21315 [Paenibacillus mucilaginosus K02]
Length = 152
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 15/147 (10%)
Query: 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154
++ V T +V + + +E RI+G PV++ K+VG +SD D++ GR ++ +
Sbjct: 12 VYCVNETDSVRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEY-----IGRHEDRV- 65
Query: 155 PEVDSTWKTF----NE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
V S + TF +E + +S+ V D+ T + V+ +E+ A +L + +
Sbjct: 66 --VGSLFFTFVFRGDEFGFDERISRILDLPVMDIATKKVITVQAEEPMENIAAILAQRQI 123
Query: 209 RRLPVVDADGKLVGIITRGNVVRAALQ 235
++LP V+ G+L GII+RG+V+R + +
Sbjct: 124 KKLP-VEQHGELAGIISRGDVIRHSFK 149
>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 162
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 28/143 (19%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P +V EAL ++ E I V+D++ +LVG+ ++ D + G G D S
Sbjct: 33 VRPDCSVFEALGVMAEFDIGSVIVVDNE-RLVGIFTERDYARKVVLKGLGSRDVS----- 86
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V +LMTP P V T +++ ++ E ++R LPVVD
Sbjct: 87 ---------------------VSELMTPNPCTVTPTHTVDEVMAIMTENRFRHLPVVD-H 124
Query: 218 GKLVGIITRGNVVRAALQIKHAT 240
G++VG++T G++V++ + + AT
Sbjct: 125 GRIVGMVTIGDMVKSVVSQQQAT 147
>gi|375082580|ref|ZP_09729636.1| inosine 5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
gi|374742800|gb|EHR79182.1| inosine 5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
Length = 483
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 35/140 (25%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
T EE+ + P ++D AL ++ + I G PVI++ ++VG+V+ D+
Sbjct: 97 TIEEVITISPEESIDYALFLMEREGIDGLPVIEN-GEIVGIVTKTDI------------- 142
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
+ G+ V D+MT + RET ++E+ L++E R
Sbjct: 143 ---------------------TTREGQRVRDVMTKEVITARETASIEEIMGLMIENNIDR 181
Query: 211 LPVVDADGKLVGIITRGNVV 230
+P+V+ +GKLVGIIT G+++
Sbjct: 182 VPIVNEEGKLVGIITVGDLL 201
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
V D MT +E+ + T +++E + +++E I P+++++ KLVG+++ DLLA
Sbjct: 150 VRDVMT--KEVITARETASIEEIMGLMIENNIDRVPIVNEEGKLVGIITVGDLLA 202
>gi|56421343|ref|YP_148661.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
gi|375009929|ref|YP_004983562.1| acetoin utilization protein [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448239087|ref|YP_007403145.1| acetoin utilization protein [Geobacillus sp. GHH01]
gi|56381185|dbj|BAD77093.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
gi|359288778|gb|AEV20462.1| Acetoin utilization protein [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207929|gb|AGE23394.1| acetoin utilization protein [Geobacillus sp. GHH01]
Length = 214
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 22/148 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ T T+ EAL++L RI PV+D++ +L+GLV+ DL D S P +
Sbjct: 14 LRATNTIAEALQLLRHHRIRHLPVVDEEGRLLGLVTSQDL-----------RDAS--PSI 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++QK +S M DL+ P+ +E+ A L E + LP+V+
Sbjct: 61 FHLHEHLEDLQKPVSTI---MKTDLIVGHPL-----DFVEEVAALFYEHRIGCLPIVN-H 111
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
GKLVGIIT+ +++R +++ + G+Q
Sbjct: 112 GKLVGIITQTDLLRTFIELTGVHQPGSQ 139
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 178 MVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
M+ + + APV+ +R T + +A +LL + R LPVVD +G+L+G++T ++ A+ I
Sbjct: 1 MLVEQVMKAPVITLRATNTIAEALQLLRHHRIRHLPVVDEEGRLLGLVTSQDLRDASPSI 60
Query: 237 KHATE 241
H E
Sbjct: 61 FHLHE 65
>gi|329938565|ref|ZP_08287990.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
gi|329302538|gb|EGG46429.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
Length = 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
G +TV D MT V + + ++ E +++ PV++ + ++VG+VS+ DLL
Sbjct: 3 GPHTVSDVMT--HTAVAVGRDAPFKDIVTLMQEWKVSALPVLEGEGRVVGVVSEADLLLK 60
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ DS ++++L L+K D+MT V V L +
Sbjct: 61 EEFR-------------DSDPDRLTQLRRLPDLAKAGALTAADVMTAPAVTVHPGATLGE 107
Query: 199 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
AAR++ + +RLPVV+A+G L G+++R ++++ L+
Sbjct: 108 AARIMARRRVKRLPVVNAEGILEGVVSRADLLKVFLR 144
>gi|344168697|emb|CCA80999.1| conserved hypothetical protein (cystathionine-beta-synthase-CBS
domain) [blood disease bacterium R229]
Length = 378
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MT + V T+V AL +L + PV+DD+ +L+G+V+ DL +
Sbjct: 236 TCADIMT--PSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTRADLTGTAAR 293
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ R + W + VG +MTP + +R + D +
Sbjct: 294 ARRQRLRD---------WFAIGAMTP-------PRVGGVMTPRVLTIRADAPMADLVPMF 337
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
+ +PVVDA G+L GI+T+ +++ A
Sbjct: 338 ASAGHHHIPVVDAHGRLAGILTQADIIHA 366
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 168 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 226
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D + +L+GI+TR
Sbjct: 225 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTR 284
Query: 227 GNV 229
++
Sbjct: 285 ADL 287
>gi|197121843|ref|YP_002133794.1| hypothetical protein AnaeK_1434 [Anaeromyxobacter sp. K]
gi|196171692|gb|ACG72665.1| CBS domain containing protein [Anaeromyxobacter sp. K]
Length = 147
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD+MT ++ ++V EA+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLFG---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
P +T + E+ LLSKT V M PAP V T L +AARLL
Sbjct: 60 ---------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAEAARLL 106
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
+ K + VV+A G L G++T N + A + A
Sbjct: 107 HDRKLNGVLVVNAQGDLQGLLTTTNALEALIHFSAA 142
>gi|383764076|ref|YP_005443058.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384344|dbj|BAM01161.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 429
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V M +E+ V +V E +++L+++ + PV+D++ +LVG+++D DLL ++
Sbjct: 120 VSYIMRELDEVASVTTDASVAEVVKLLLDRGVRSLPVVDEERRLVGIITDGDLLRRAGLT 179
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLS--KTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
M P+ +++ LL+ + + G++MT + VR + AA
Sbjct: 180 ARIALHKEM-PD--------DQIHALLTTLRRSPLTAGEMMTAPVISVRTDETVRTAAAR 230
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+++ +RLPVV+ +G+L+G+++R ++ R+
Sbjct: 231 MVKHNLKRLPVVNEEGRLMGMVSRIDIFRS 260
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++E + L R V+D + ++G+++D DLL R+ P +
Sbjct: 292 VGPDATLEEIVRALEASRRRRVVVVDSERHVLGMITDGDLLR--------RSQQRQHPGL 343
Query: 158 DSTWKTFNEVQKLLSK---TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + + + + G+ DLM+ + +R +L +A RL+ +RLPVV
Sbjct: 344 LERLRRLVVGEPAIDQVLPSAGERAADLMSAPVITIRPDASLGEALRLMTTHAVKRLPVV 403
Query: 215 DADGKLVGIITRGNVVRAALQ 235
DA+G+L+G++ R +V+R ++
Sbjct: 404 DAEGRLLGLLGRASVLRGLME 424
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+ +LLL+ R LPVVD + +LVGIIT G+++R A
Sbjct: 141 EVVKLLLDRGVRSLPVVDEERRLVGIITDGDLLRRA 176
>gi|226359465|ref|YP_002777242.1| hypothetical protein ROP_00500 [Rhodococcus opacus B4]
gi|226237949|dbj|BAH48297.1| hypothetical protein [Rhodococcus opacus B4]
Length = 185
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + VV+ + ++ A +L E PV+DD +LVG+++ D+L RA
Sbjct: 8 QRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RAGT 58
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + + VG++MT V + D +++LL R L
Sbjct: 59 A----------------------SSETVGEVMTAPAVAAPMYQYVADVSKMLLHQGLRSL 96
Query: 212 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
PVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 97 PVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 130
>gi|220916635|ref|YP_002491939.1| hypothetical protein A2cp1_1529 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954489|gb|ACL64873.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 147
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD+MT ++ ++V EA+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLFG---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
P +T + E+ LLSKT V M PAP V T L +AARLL
Sbjct: 60 ---------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAEAARLL 106
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 239
+ K + VV+A G L G++T N + A + A
Sbjct: 107 HDRKLNGVLVVNAQGDLQGLLTTTNALEALIHFSAA 142
>gi|330823694|ref|YP_004386997.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|329309066|gb|AEB83481.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 225
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 21/148 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E+ + T ++ +A + L ++++ PV+D ++VGL+ D+ + D
Sbjct: 88 VSDVMT--REVSSLPATMSIQDAWQALRLEQLSQAPVVDARGQVVGLLRRSDMASAD--- 142
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ P++D +TF + + ++ +++PAP V + T+L A+ +L
Sbjct: 143 --------LLPDLDGIKRTFAQAHRPITDV-------MLSPAPTV-SDDTDLRRVAKAML 186
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
ET LPV D G L G + R +++RA
Sbjct: 187 ETGLSGLPVTDEAGMLQGFVARSDILRA 214
>gi|20092886|ref|NP_618961.1| hypothetical protein MA4093 [Methanosarcina acetivorans C2A]
gi|19918193|gb|AAM07441.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 284
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 35/126 (27%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
DE L+IL K I+G PV+ D K+VG+V+ +LL PE
Sbjct: 25 DEVLKILKNKHISGVPVLKDS-KVVGIVTRTNLLQ--------------NPE-------- 61
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 224
E Q L LMT P+ + ++L+ AARLLL+ RRLPVVD DGKLVG++
Sbjct: 62 -EEQLAL----------LMTRDPITISPGSDLQTAARLLLQHGIRRLPVVD-DGKLVGLV 109
Query: 225 TRGNVV 230
T +VV
Sbjct: 110 TVADVV 115
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS--- 172
+ PV+D +L+G++SD D++A I S + + D W T+ ++ +S
Sbjct: 156 VKAVPVLDAALELIGIISDRDVIAASVIEDSVEMSDMSAGQDDDAW-TWESMRDTMSIYY 214
Query: 173 -----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 227
K + D+M P+ ++ D AR + + ++P+++++ KL G++
Sbjct: 215 SVSRIKVPNLIGNDVMIREPITATYIASVSDCARKMKRNRIDQIPIINSNRKLQGLLRDH 274
Query: 228 NVVRAALQ 235
++++ ++
Sbjct: 275 DLLKPLVE 282
>gi|392411076|ref|YP_006447683.1| putative transcriptional regulator, contains C-terminal CBS domains
[Desulfomonile tiedjei DSM 6799]
gi|390624212|gb|AFM25419.1| putative transcriptional regulator, contains C-terminal CBS domains
[Desulfomonile tiedjei DSM 6799]
Length = 294
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 30/139 (21%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
V++P + EA E + KRITG PV+D D ++VG++S DL +D++ +GR D +
Sbjct: 7 VLRPDMPMLEAKEEMRTKRITGAPVMDGD-RIVGIISMSDL--IDAME-NGRMDTRVIDN 62
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
+ KT ++ APV +A L + RLPV D
Sbjct: 63 MTRIVKT------------------VLKDAPVT--------EAINQLGRKGHSRLPVTDQ 96
Query: 217 DGKLVGIITRGNVVRAALQ 235
DGKLVGI+T G ++RA L
Sbjct: 97 DGKLVGIVTTGTIIRALLH 115
>gi|398351005|ref|YP_006396469.1| hypothetical protein USDA257_c11210 [Sinorhizobium fredii USDA 257]
gi|390126331|gb|AFL49712.1| hypothetical protein USDA257_c11210 [Sinorhizobium fredii USDA 257]
Length = 390
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
SG T G+ M+ ++ V P TT+ +A +LVE RI PV+ + +VG+++ D +
Sbjct: 235 SGEVTCGEIMS--RDVLTVAPETTLRKAWRMLVEHRIKALPVVTEKDGMVGIITQTDFMR 292
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+++ GR + + + L + ++V ++MT T +
Sbjct: 293 HATLTADGRLQIGLRERIGNIIG--------LPAKSPRLVCEIMTTRVQSALPETMIAKL 344
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + +PVVDAD ++VGI+T+ +++ A Q
Sbjct: 345 VPPMADMGLHHMPVVDADNRVVGIVTQSDLIAALFQ 380
>gi|418463864|ref|ZP_13034810.1| hypothetical protein SZMC14600_22675 [Saccharomonospora azurea SZMC
14600]
gi|359731136|gb|EHK80246.1| hypothetical protein SZMC14600_22675 [Saccharomonospora azurea SZMC
14600]
Length = 204
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + V P V +A +L E T PV+D+ ++VG+V++ D++A
Sbjct: 5 DIMTTP--VVTVSPDDPVKKATRLLAEHGFTALPVVDEGDRVVGIVTEADVVA------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
GR P D+ ++T V ++MT +P ++ T++ + LLE
Sbjct: 56 GR-----VPP-DARYRTGAAAAPTTDARES--VAEVMTTSPTCTQQGTDVAELVGTLLEG 107
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
YR +PV+ A KLVG++TR +VVRA
Sbjct: 108 HYRAVPVL-AGSKLVGVVTRSDVVRA 132
>gi|345859432|ref|ZP_08811782.1| CBS domain pair family protein [Desulfosporosinus sp. OT]
gi|344327579|gb|EGW39007.1| CBS domain pair family protein [Desulfosporosinus sp. OT]
Length = 208
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 25/154 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V FMT+ ++ V P ++ + + ++ EK+I PV+D KLVG V+D DL
Sbjct: 3 VRQFMTS--QVFTVSPDESIADTMVLMREKKINKLPVMDK-GKLVGFVTDGDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG--DLMTPAPVVVRETTNLEDAARL 202
+ P +T F E+ L++KT + V +MT P T +EDAA L
Sbjct: 53 ------REVSPSPATTLSIF-ELNYLIAKTPIREVAVKKVMTCQP-----DTQIEDAALL 100
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ E + LPV+D GKLVGIIT +++ A L I
Sbjct: 101 MREHRISGLPVLD-QGKLVGIITATDILDAFLDI 133
>gi|288960546|ref|YP_003450886.1| hypothetical protein AZL_a08110 [Azospirillum sp. B510]
gi|288912854|dbj|BAI74342.1| hypothetical protein AZL_a08110 [Azospirillum sp. B510]
Length = 233
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT + + + P T+ EA ++ I+G PV+D K+VG++S+ DLL +
Sbjct: 5 DLMTPR--VITIGPEETIAEAARKMLANNISGMPVVDAAGKVVGIISEGDLLRRVELGTE 62
Query: 147 -------GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
G P D K++ + V D+MT V V E ++
Sbjct: 63 RHRSWWLGLVSGGTVPAED------------FIKSHARRVADVMTSHVVTVDENATPDEV 110
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
R++ + +R+PVV + G LVGI++R N++RA
Sbjct: 111 VRVMETRRIKRVPVV-SRGALVGIVSRANLLRA 142
>gi|146318309|ref|YP_001198021.1| hypothetical protein SSU05_0655 [Streptococcus suis 05ZYH33]
gi|145689115|gb|ABP89621.1| hypothetical protein SSU05_0655 [Streptococcus suis 05ZYH33]
Length = 122
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 21/141 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 204 LETKYRRLPVVDADGKLVGII 224
+ K LPVVD +G+L G+I
Sbjct: 102 YKNKVGILPVVD-NGQLYGVI 121
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
V D MT V + T + AA ++ E RLPV++ D KLVG++T G + A+
Sbjct: 3 VKDFMTRKVVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVTEGTIAEAS 56
>gi|340618834|ref|YP_004737287.1| inosine-5'-monophosphate dehydrogenase [Zobellia galactanivorans]
gi|339733631|emb|CAZ97008.1| Inosine-5'-monophosphate dehydrogenase [Zobellia galactanivorans]
Length = 490
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 33/114 (28%)
Query: 113 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 172
E I G P++DD+ KL+G+V++ DL
Sbjct: 119 EYSIGGIPIVDDEGKLIGIVTNRDLR--------------------------------FE 146
Query: 173 KTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
K N + + ++MT +V V E T+LE A +L E K +LPVVD D KLVG+IT
Sbjct: 147 KNNDRPISEVMTSKNLVTVSEGTSLEQAEDILQENKIEKLPVVDKDNKLVGLIT 200
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
+ + MT+K L V T++++A +IL E +I PV+D D KLVGL++ D+ L
Sbjct: 153 ISEVMTSKN-LVTVSEGTSLEQAEDILQENKIEKLPVVDKDNKLVGLITFRDITKL 207
>gi|307104772|gb|EFN53024.1| hypothetical protein CHLNCDRAFT_137521 [Chlorella variabilis]
Length = 1085
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 35/116 (30%)
Query: 114 KRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK 173
K I G PV+D KLVG++S DL +
Sbjct: 74 KGIEGLPVVDAAGKLVGVLSRKDL-----------------------------------Q 98
Query: 174 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
G +V D+M+ P+ ++ T AA +++ K RLPVVD +GK VGIITR ++
Sbjct: 99 KGGSVVQDVMSAQPIAMKATDRASAAAHSMIDHKIHRLPVVDDEGKCVGIITRTDI 154
>gi|290955614|ref|YP_003486796.1| hypothetical protein SCAB_10531 [Streptomyces scabiei 87.22]
gi|260645140|emb|CBG68226.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 233
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS-- 142
V D MTT + V+P T E ++L E IT PV+DDD + VG+VS+ DLL ++
Sbjct: 6 VSDLMTTS--VVRVRPDTGFKEIAKLLAEYDITAVPVVDDDDRPVGVVSEADLLRKEAAQ 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ +G + P + K + + G LM V + + +AA++
Sbjct: 64 LDPAG-----LLPVLHP--KPAARAKAEAATAEG-----LMNSPAVTAQPQWTVVEAAQV 111
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ + +RLPVVD G+LVG+I+R +++R L+
Sbjct: 112 MERHRVKRLPVVDEAGRLVGLISRADLLRVFLR 144
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MV DLMT + V VR T ++ A+LL E +PVVD D + VG+++ +++R
Sbjct: 4 RMVSDLMTTSVVRVRPDTGFKEIAKLLAEYDITAVPVVDDDDRPVGVVSEADLLR 58
>gi|14520560|ref|NP_126035.1| hypothetical protein PAB2118 [Pyrococcus abyssi GE5]
gi|5457776|emb|CAB49266.1| Hypothetical protein, containing CBS domains [Pyrococcus abyssi
GE5]
gi|380741087|tpe|CCE69721.1| TPA: hypothetical protein PAB2118 [Pyrococcus abyssi GE5]
Length = 282
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 33/132 (25%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T + AL+I + ++ FPV++ + KLVG++S
Sbjct: 19 TRNYALDIFKKHKVRSFPVVNREGKLVGIIS----------------------------- 49
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
++++L+ + + + L+ V+E +L+ AARL+LE YRR+ VVD +GK VG
Sbjct: 50 ----IKRVLTNPDEEQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVG 105
Query: 223 IITRGNVVRAAL 234
I+T G++VR L
Sbjct: 106 ILTVGDIVRRYL 117
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN-- 175
PV+DD+ +L+G++ + DLL I ++ + + W + L K
Sbjct: 159 ALPVVDDNGELIGIIDETDLLRDSEIVRIMKS-TELAASSEEEWILESHPTLLFEKFELQ 217
Query: 176 --GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
K V ++MT +V + + A+ +++ + +LPV+ +G LVG+I ++++
Sbjct: 218 LPNKPVEEIMTKDVIVATPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVL 277
Query: 234 LQIK 237
++ K
Sbjct: 278 VKAK 281
>gi|353227418|emb|CCA77926.1| hypothetical protein PIIN_00640 [Piriformospora indica DSM 11827]
Length = 672
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A ++ KR V+D++ L G+ + DL S+ S E T +
Sbjct: 90 TVADASQLCAAKRTDCVLVVDEEEGLSGIFTAKDLAFRVSLPSSF--------ECQPTDR 141
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
F +V + +V +MTP P+V R+TT+ +A +L+++ +R LPV + DG +VG
Sbjct: 142 VFEQVTAMGLDPRTTLVSTIMTPNPMVTRDTTSATEALQLMVQRGFRHLPVCNDDGNVVG 201
Query: 223 IITRGNVVRAAL 234
++ V AL
Sbjct: 202 LLDITKVFHEAL 213
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 28/162 (17%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMF 154
V + TT+ EAL+++V++ PV +DD +VGL+ + ALD I A ++
Sbjct: 168 VTRDTTSATEALQLMVQRGFRHLPVCNDDGNVVGLLDITKVFHEALDKIERGSSASQKLY 227
Query: 155 PEVDSTWKTFNEV-------------QKLLSKTNGKMVGDLMTP--APVVVRETTNLEDA 199
++S + V + L KT + +M P V T + DA
Sbjct: 228 SALESVQTELDGVASNPQAAAMMAFVESLRDKTALPDLSTVMDSRTQPATVGPRTTVRDA 287
Query: 200 ARLLLETKYRRLPVVD-----------ADGKLVGIITRGNVV 230
ARL+ E + + V++ A K+ GI T ++V
Sbjct: 288 ARLMKENRTTAVCVMEGGANTAGQPTGAPAKIAGIFTSKDIV 329
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241
+MTP P V + ++DA + + Y LPVV++DG+LV II + A L+ +A
Sbjct: 347 VMTPHPDVAPPSMTIQDALKKMYNGHYLNLPVVESDGRLVAIIDVLKLTYATLEQMNALA 406
Query: 242 MGAQ 245
+Q
Sbjct: 407 DASQ 410
>gi|242398044|ref|YP_002993468.1| Inosine-5'-monophosphate dehydrogenase [Thermococcus sibiricus MM
739]
gi|242264437|gb|ACS89119.1| Inosine-5'-monophosphate dehydrogenase [Thermococcus sibiricus MM
739]
Length = 483
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 35/140 (25%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
T EE+ + P T+D AL ++ + I G PVI ++ +LVG+V+ D
Sbjct: 97 TVEEVITISPEETIDYALFLMEREGIDGLPVI-ENGELVGIVTKTD-------------- 141
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
++ G+ V ++MT + +E+ ++E+ L++E R
Sbjct: 142 --------------------ITTREGERVKEVMTKDVITAKESASVEEIMTLMIENSIDR 181
Query: 211 LPVVDADGKLVGIITRGNVV 230
+P+VD DGKLVGIIT G+++
Sbjct: 182 VPIVDDDGKLVGIITIGDLL 201
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
K + +V+E + +++E I P++DDD KLVG+++ DLLA
Sbjct: 162 KESASVEEIMTLMIENSIDRVPIVDDDGKLVGIITIGDLLA 202
>gi|269925732|ref|YP_003322355.1| hypothetical protein Tter_0615 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789392|gb|ACZ41533.1| protein of unknown function DUF190 [Thermobaculum terrenum ATCC
BAA-798]
Length = 426
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
+A+E+L + PVID++ ++G+++ DL+ + P +D KT
Sbjct: 140 DAIELLYNQVFKALPVIDNEKHVLGVITSSDLVNQGILP-------FYLPLLD---KTDV 189
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 225
+ + L +K V +M+ V + + ++AA L+ K +RLPVVD KLVGI++
Sbjct: 190 DKKDLHNKAYNSSVSSVMSKPAVTINQDATAQEAANLMASKKIKRLPVVDDQDKLVGIVS 249
Query: 226 RGNVVRAALQIKHATE 241
R +++ AA+ K E
Sbjct: 250 RVDILAAAMHTKAREE 265
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD--NSMFPEVDSTWKTFNEVQ 168
L+E I V+D+ K+ G++ DL+ +++S RA + ++ ++ ++
Sbjct: 303 LLESPIHRLIVVDEQNKVKGIIGSSDLM--NAVSSHNRAGIMEILRAQILRDERSMEHIR 360
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
K+ ++T D+M V + ++ AA L+++ + + LPVVD GKLVG+I R
Sbjct: 361 KIRART----AEDIMNREVVCISADADISSAAELMVKQRKKILPVVDDSGKLVGVIARDE 416
Query: 229 VV 230
++
Sbjct: 417 IL 418
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
Query: 99 KPTTTVD------EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
KP T++ EA ++ K+I PV+DD KLVG+VS D+LA ++ R ++
Sbjct: 209 KPAVTINQDATAQEAANLMASKKIKRLPVVDDQDKLVGIVSRVDILAA-AMHTKAREEDL 267
Query: 153 MFP-EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
P ++ S+ K V D+M V + D + LLE+ RL
Sbjct: 268 KPPSQISSSTK----------------VSDIMHTQVPTVDLGAPILDVVKGLLESPIHRL 311
Query: 212 PVVDADGKLVGIITRGNVVRA 232
VVD K+ GII +++ A
Sbjct: 312 IVVDEQNKVKGIIGSSDLMNA 332
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 34/56 (60%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 234
+ ++MTP P+ + ++ + DA LL ++ LPV+D + ++G+IT ++V +
Sbjct: 121 IKEIMTPNPISINVSSPIVDAIELLYNQVFKALPVIDNEKHVLGVITSSDLVNQGI 176
>gi|402847927|ref|ZP_10896195.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402501722|gb|EJW13366.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 243
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT++ + ++P TV+EA+ +++ RI+G PV+D + LVG+V++ D L + +G+
Sbjct: 5 DVMTSR--VVSIRPEATVEEAVRQMLDNRISGLPVVDGEGDLVGIVTEGDFLRR-AETGT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R P N + K +++G+ V ++MT PV V E T L DA ++E
Sbjct: 62 CRK----RPRWLEILIGPNSLAKDYVRSHGRKVEEVMTRDPVTVTEDTTL-DAIVSIMER 116
Query: 207 KYRRLPVVDADGKLVGIITRGNVVRA 232
+ + V ++VGI++R N++ A
Sbjct: 117 RRVKRVPVVRGREVVGIVSRANLLHA 142
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
D+MT V +R +E+A R +L+ + LPVVD +G LVGI+T G+ +R A
Sbjct: 5 DVMTSRVVSIRPEATVEEAVRQMLDNRISGLPVVDGEGDLVGIVTEGDFLRRA 57
>gi|395777454|ref|ZP_10457969.1| hypothetical protein Saci8_47232 [Streptomyces acidiscabies 84-104]
Length = 235
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG MT E+ + T E + +L + RI G PV+D+D ++G++S DL+ ++
Sbjct: 6 VGALMT--HEVVTARYGTPFKEVVRLLDDHRIGGLPVVDEDGTVIGVISATDLVPHQAVR 63
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R S ++ +++ + G +MT V VR +AARL+
Sbjct: 64 TGVRHRFS------------PRARRAAARSRARTAGGIMTAPAVTVRADATATEAARLMA 111
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ RLPVVD + +LVGI+TR +++ L+
Sbjct: 112 ARRVERLPVVDEEDRLVGIVTRHDLLHVFLR 142
>gi|448460309|ref|ZP_21597134.1| peptidase M50 [Halorubrum lipolyticum DSM 21995]
gi|445807050|gb|EMA57136.1| peptidase M50 [Halorubrum lipolyticum DSM 21995]
Length = 395
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 30/149 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +E+LHVV T+V E + + E+R TG+PV+ D LVG+V+ D
Sbjct: 250 TVADVMTRREDLHVVTEDTSVAELMSRMFEERHTGYPVLHGD-DLVGMVTLEDA------ 302
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + V D+M V V + A + +
Sbjct: 303 ------------------RSIREVER-----DAYQVADVMESEVVGVGPEVDAMTALQTM 339
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA 232
E RLPVVD + +LVG+I+R +++ A
Sbjct: 340 QENGVGRLPVVDRNDELVGLISRSDLMTA 368
>gi|375095414|ref|ZP_09741679.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
gi|374656147|gb|EHR50980.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
Length = 199
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T V A +L E T PV+D +LVG+V++ DL+ D + G R S P+
Sbjct: 14 VTPETPVKRAAGLLTEHGFTALPVVDARQRLVGIVTEADLVR-DRVPGDARFRGSPAPQP 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
ST VG +M+ V + +L LL+ +R +P+VD +
Sbjct: 73 PST------------------VGAVMSTPAVSMDSRADLSKLVAALLDEGFRAMPIVDGE 114
Query: 218 GKLVGIITRGNVVRA 232
+LVGI+TR +VVRA
Sbjct: 115 -RLVGIVTRRDVVRA 128
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MT V V T ++ AA LL E + LPVVDA +LVGI+T ++VR
Sbjct: 6 IMTSPVVTVTPETPVKRAAGLLTEHGFTALPVVDARQRLVGIVTEADLVR 55
>gi|301058318|ref|ZP_07199351.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300447554|gb|EFK11286.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 225
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
++ +A++ + EK I+ PVI KLVG+V+D DL RA S D+T
Sbjct: 19 SMQDAMQRMKEKGISMLPVIKKG-KLVGVVTDRDL---------KRASAS-----DATTL 63
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
+E+ L++K V D+MT P+ + +E+AA +LLE PV+D GK++G
Sbjct: 64 EVHELLFLITKIK---VQDIMTRNPITIPFDFTVEEAAEVLLEKNISGAPVMDEKGKVIG 120
Query: 223 IITRGNVVRAALQIKHATEMGAQ 245
IIT+ ++ R + + + G Q
Sbjct: 121 IITKNDLFRVLISLTGVGKRGIQ 143
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+EA E+L+EK I+G PV+D+ K++G+++ DL L S++G G+ EV+
Sbjct: 93 TVEEAAEVLLEKNISGAPVMDEKGKVIGIITKNDLFRVLISLTGVGKRGIQFAFEVEDRP 152
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPV 188
+ E+ ++ + G+MV L T V
Sbjct: 153 GSIRELADVIRRYGGRMVSILSTYENV 179
>gi|386000743|ref|YP_005919042.1| hypothetical protein Mhar_0026 [Methanosaeta harundinacea 6Ac]
gi|357208799|gb|AET63419.1| CBS domain containing protein [Methanosaeta harundinacea 6Ac]
Length = 376
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 36/156 (23%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P GV V D M+ +L V P TTV E + ++ ++ G+PV++ +L G+V
Sbjct: 249 PLEGV-KVRDIMS--RDLRTVSPDTTVPEIMNLMFREKHRGYPVMEGG-RLAGIV----- 299
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK-MVGDLMTPAPVVVRETTNL 196
T ++VQK+ + G +VGD+M A V+ +
Sbjct: 300 -------------------------TISDVQKVPEERRGTTVVGDVMVRAIYVIEPNADA 334
Query: 197 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
+A + ++E + RRLPV++ DG+LVGI++R +++RA
Sbjct: 335 AEAMKKMMEQQIRRLPVME-DGELVGIVSRSDLLRA 369
>gi|335436655|ref|ZP_08559448.1| CBS domain containing protein [Halorhabdus tiamatea SARL4B]
gi|334897618|gb|EGM35749.1| CBS domain containing protein [Halorhabdus tiamatea SARL4B]
Length = 267
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 80/165 (48%), Gaps = 39/165 (23%)
Query: 77 APSSGVYTVGDFMTTKEELHVVKPTTTV-DEALEILVEKRITGFPVIDDDWKLVGLVSDY 135
A S TVGD+MT E+ V P TV D A I TGFPV + G VS
Sbjct: 2 ASSEESLTVGDYMT--HEVSTVAPEDTVADVASRIADSGGHTGFPVCSG-RDVHGFVSAS 58
Query: 136 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
DLL AD+ P V +++SK DLM P +
Sbjct: 59 DLLLA--------ADD--LP-----------VTEVMSK-------DLMVAHP-----DMD 85
Query: 196 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
L+D AR++L + +RLPV+D DG+LVGII+ +V+R+ QI+ AT
Sbjct: 86 LDDVARVILRSGIQRLPVLDDDGQLVGIISNADVIRS--QIERAT 128
>gi|345852847|ref|ZP_08805772.1| hypothetical protein SZN_23651 [Streptomyces zinciresistens K42]
gi|345635710|gb|EGX57292.1| hypothetical protein SZN_23651 [Streptomyces zinciresistens K42]
Length = 233
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + V+ T E ++L E IT PV+DDD + VG+VS+ DLL ++
Sbjct: 6 VSDLMTTP--VVSVRRGTGFKEIAKLLAEHGITAVPVVDDDERAVGVVSEADLLRKEA-- 61
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ D + V T +K LM V R +AA+++
Sbjct: 62 --AQLDPAGLLPVLRPGPTDR------AKARATTAEGLMNSPAVTARAQWTAVEAAQVME 113
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+RLPVVD G+LVG+++R +++R L+
Sbjct: 114 RHHVKRLPVVDEAGRLVGLVSRADLLRVFLR 144
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+MV DLMT V VR T ++ A+LL E +PVVD D + VG+++ +++R
Sbjct: 4 RMVSDLMTTPVVSVRRGTGFKEIAKLLAEHGITAVPVVDDDERAVGVVSEADLLR 58
>gi|420237534|ref|ZP_14741999.1| hypothetical protein A200_07053 [Parascardovia denticolens IPLA
20019]
gi|391879156|gb|EIT87668.1| hypothetical protein A200_07053 [Parascardovia denticolens IPLA
20019]
Length = 616
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
K E++ + T T +A+ + EK+I+G PV+D+ +LVG VSD D+ L +++
Sbjct: 476 KTEVYTLPATATALDAMRLFTEKKISGAPVVDEQGELVGFVSDGDV--LSTLAEQHPQFT 533
Query: 152 SMFPEV-DSTWKTFN-EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
S + V +S ++F+ ++ +LLS V + T + ++ +++++ +
Sbjct: 534 SFYAAVIESNGESFDKKLDELLSLP----VDRISTKHVITADVNDSMPHICQVMVQRHLK 589
Query: 210 RLPVVDADGKLVGIITRGNVVRAAL 234
++PV+D G++VGI+ R N++R A+
Sbjct: 590 KVPVMD-QGRMVGILNRSNILRYAV 613
>gi|386714143|ref|YP_006180466.1| hypothetical protein HBHAL_2844 [Halobacillus halophilus DSM 2266]
gi|384073699|emb|CCG45192.1| hypothetical protein HBHAL_2844 [Halobacillus halophilus DSM 2266]
Length = 142
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 30/146 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT+ ++ V + T+ A +I+ +K + PV D+ +L+G+V+D DL+
Sbjct: 3 TVKDIMTS--DVSVCRTDDTLSSAAQIMKQKNVGAVPVCDNQGQLMGMVTDRDLVL---- 56
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G AD PE +Q+++S L +P ETT LE+A++++
Sbjct: 57 --RGYADKK--PET-------TPIQQVMSDR-------LYNCSP----ETT-LEEASKIM 93
Query: 204 LETKYRRLPVVDADGKLVGIITRGNV 229
E + RRLPVV+ +GKL GII+ G++
Sbjct: 94 AEHQIRRLPVVE-NGKLSGIISLGDL 118
>gi|401684690|ref|ZP_10816566.1| CBS domain protein [Streptococcus sp. BS35b]
gi|414158169|ref|ZP_11414463.1| hypothetical protein HMPREF9188_00737 [Streptococcus sp. F0441]
gi|400184960|gb|EJO19196.1| CBS domain protein [Streptococcus sp. BS35b]
gi|410870714|gb|EKS18671.1| hypothetical protein HMPREF9188_00737 [Streptococcus sp. F0441]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|456392581|gb|EMF57924.1| hypothetical protein SBD_0596 [Streptomyces bottropensis ATCC
25435]
Length = 217
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLL----ALDSISGSGRADNSMFPEVDSTW 161
E +++L E +T PV+DD +G+VS+ DLL A D SG + P +++ W
Sbjct: 25 EIVKLLAENDVTAVPVVDDLDHPIGVVSEADLLRKSSAQDDPSGL-----TPVPHLEA-W 78
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 221
+ +K G +LM+ V R + +AAR + +RLPVVD G+L
Sbjct: 79 ER--------AKAEGASAEELMSAPAVCARPEWTVVEAARFMSVRNVKRLPVVDEAGRLR 130
Query: 222 GIITRGNVVRAALQ 235
GI++RG+++R L+
Sbjct: 131 GIVSRGDLLRIFLR 144
>gi|421208584|ref|ZP_15665609.1| CBS domain pair family protein [Streptococcus pneumoniae 2070005]
gi|421224607|ref|ZP_15681353.1| CBS domain pair family protein [Streptococcus pneumoniae 2070768]
gi|395577054|gb|EJG37608.1| CBS domain pair family protein [Streptococcus pneumoniae 2070005]
gi|395591943|gb|EJG52238.1| CBS domain pair family protein [Streptococcus pneumoniae 2070768]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|365875256|ref|ZP_09414785.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442588350|ref|ZP_21007162.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
gi|365756904|gb|EHM98814.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442562055|gb|ELR79278.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
Length = 486
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 31/123 (25%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+ EA ++ +I+G PV+D+D KL+G++++ D+ + E D K
Sbjct: 108 TLGEAKGMMAHYKISGLPVVDNDNKLIGIITNRDV---------------KYQE-DLGLK 151
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
V+++++K N +V ++T LE+A +LL+++ +LP+VD++ KLVG
Sbjct: 152 ----VEEIMTKDN-----------LIVSHKSTTLEEAKEILLKSRVEKLPIVDSENKLVG 196
Query: 223 IIT 225
+IT
Sbjct: 197 LIT 199
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK+ L V +TT++EA EIL++ R+ P++D + KLVGL++ D+
Sbjct: 155 IMTKDNLIVSHKSTTLEEAKEILLKSRVEKLPIVDSENKLVGLITIKDI 203
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+AL + G G +M E + N+V + NG M+ D PV + + L
Sbjct: 62 IALARVGGLGFIHKNMPIE-----EQANQVNSVKRSENG-MISD-----PVTLSKEHTLG 110
Query: 198 DAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
+A ++ K LPVVD D KL+GIIT +V
Sbjct: 111 EAKGMMAHYKISGLPVVDNDNKLIGIITNRDV 142
>gi|417924144|ref|ZP_12567596.1| CBS domain protein [Streptococcus mitis SK569]
gi|342836198|gb|EGU70414.1| CBS domain protein [Streptococcus mitis SK569]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|339641089|ref|ZP_08662533.1| CBS domain protein [Streptococcus sp. oral taxon 056 str. F0418]
gi|339454358|gb|EGP66973.1| CBS domain protein [Streptococcus sp. oral taxon 056 str. F0418]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 21/161 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQTLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIHDVITVSRYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+ K LPVVD + ++ G+IT ++ +A L++ E G +
Sbjct: 103 KNKVGILPVVDNE-QVYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|255534552|ref|YP_003094923.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
gi|255340748|gb|ACU06861.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
Length = 486
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 31/123 (25%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+ EA E++ +I+G PV+D D KL+G++++ D+ +++S
Sbjct: 108 TLMEAKEMMANFKISGLPVVDADNKLIGIITNRDVKYQENLSA----------------- 150
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
+V++L++K L+T + TNLE A ++LL+ + +LP+VD++ KLVG
Sbjct: 151 ---KVEELMTKDK------LITS-----DKATNLEQAKQILLKNRVEKLPIVDSEFKLVG 196
Query: 223 IIT 225
+IT
Sbjct: 197 LIT 199
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK++L T +++A +IL++ R+ P++D ++KLVGL++ D+
Sbjct: 155 LMTKDKLITSDKATNLEQAKQILLKNRVEKLPIVDSEFKLVGLITIKDI 203
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 229
M PV + + L +A ++ K LPVVDAD KL+GIIT +V
Sbjct: 96 MISDPVTLSKDHTLMEAKEMMANFKISGLPVVDADNKLIGIITNRDV 142
>gi|383938426|ref|ZP_09991637.1| CBS domain protein [Streptococcus pseudopneumoniae SK674]
gi|383714635|gb|EID70630.1| CBS domain protein [Streptococcus pseudopneumoniae SK674]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|88801611|ref|ZP_01117139.1| CBS domain protein [Polaribacter irgensii 23-P]
gi|88782269|gb|EAR13446.1| CBS domain protein [Polaribacter irgensii 23-P]
Length = 155
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 25/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTT+ L K ++D +E L+ I+G PV++D+ +L+G++S+ D +
Sbjct: 23 VSDYMTTR--LITFKAEDSLDHVIEKLIVHNISGGPVVNDENELIGIISETDCI------ 74
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ S K +N + S TN VG M + + N+ DAA +
Sbjct: 75 -----------KHISEGKYYN----MPSDTNN-TVGKHMVRDVDTIDKNMNIFDAAFKFI 118
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 240
++ RR PV ++ GK++G +++ +V++AAL ++ T
Sbjct: 119 SSRRRRFPVTES-GKVIGQLSQKDVLKAALAVRGNT 153
>gi|386360358|ref|YP_006058603.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383509385|gb|AFH38817.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 153
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 85 VGDFMTTKEELHVVKPT-TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
V D MT+ VV P TT+D+ +++E+RI V+D+ +LVG+V++ D L I
Sbjct: 7 VKDVMTSP---AVVVPLGTTLDQVAALMLERRIGSVLVVDEKGRLVGIVTESDFLKEKGI 63
Query: 144 SGSG-RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLEDAAR 201
S RA P + + +++++L + V ++MT APV V L A +
Sbjct: 64 PFSTFRA-----PLLLGRFLNGGQLERILQEAKATRVEEIMT-APVHTVAPEAPLRQALK 117
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVR 231
++L R+PVVD +GK VG++ R +++R
Sbjct: 118 VMLAYDINRVPVVDEEGKPVGVLARFDLLR 147
>gi|168484842|ref|ZP_02709787.1| AcuB family protein [Streptococcus pneumoniae CDC1873-00]
gi|417695911|ref|ZP_12345091.1| CBS domain pair family protein [Streptococcus pneumoniae GA47368]
gi|418091368|ref|ZP_12728513.1| CBS domain pair family protein [Streptococcus pneumoniae GA44452]
gi|418107133|ref|ZP_12744173.1| CBS domain pair family protein [Streptococcus pneumoniae GA41410]
gi|418109715|ref|ZP_12746744.1| CBS domain pair family protein [Streptococcus pneumoniae GA49447]
gi|418145975|ref|ZP_12782759.1| CBS domain pair family protein [Streptococcus pneumoniae GA13637]
gi|418161790|ref|ZP_12798481.1| CBS domain pair family protein [Streptococcus pneumoniae GA17328]
gi|418168846|ref|ZP_12805492.1| CBS domain pair family protein [Streptococcus pneumoniae GA19077]
gi|418175557|ref|ZP_12812155.1| CBS domain pair family protein [Streptococcus pneumoniae GA41437]
gi|418218491|ref|ZP_12845159.1| CBS domain pair family protein [Streptococcus pneumoniae NP127]
gi|418220675|ref|ZP_12847331.1| CBS domain pair family protein [Streptococcus pneumoniae GA47751]
gi|418238325|ref|ZP_12864881.1| CBS domain pair family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422266|ref|ZP_13962485.1| CBS domain protein [Streptococcus pneumoniae GA43264]
gi|419459599|ref|ZP_13999535.1| CBS domain protein [Streptococcus pneumoniae GA02270]
gi|419461879|ref|ZP_14001795.1| CBS domain protein [Streptococcus pneumoniae GA02714]
gi|419481777|ref|ZP_14021571.1| CBS domain protein [Streptococcus pneumoniae GA40563]
gi|419488237|ref|ZP_14027990.1| CBS domain protein [Streptococcus pneumoniae GA44386]
gi|419525497|ref|ZP_14065062.1| CBS domain protein [Streptococcus pneumoniae GA14373]
gi|421206199|ref|ZP_15663263.1| CBS domain pair family protein [Streptococcus pneumoniae 2090008]
gi|421226926|ref|ZP_15683640.1| CBS domain pair family protein [Streptococcus pneumoniae 2072047]
gi|421229400|ref|ZP_15686076.1| CBS domain pair family protein [Streptococcus pneumoniae 2061376]
gi|421238389|ref|ZP_15694958.1| CBS domain pair family protein [Streptococcus pneumoniae 2071247]
gi|421244583|ref|ZP_15701086.1| CBS domain pair family protein [Streptococcus pneumoniae 2081685]
gi|421272396|ref|ZP_15723243.1| CBS domain protein [Streptococcus pneumoniae SPAR55]
gi|421291558|ref|ZP_15742298.1| CBS domain pair family protein [Streptococcus pneumoniae GA56348]
gi|421311501|ref|ZP_15762108.1| CBS domain pair family protein [Streptococcus pneumoniae GA58981]
gi|172041990|gb|EDT50036.1| AcuB family protein [Streptococcus pneumoniae CDC1873-00]
gi|332203908|gb|EGJ17975.1| CBS domain pair family protein [Streptococcus pneumoniae GA47368]
gi|353766741|gb|EHD47281.1| CBS domain pair family protein [Streptococcus pneumoniae GA44452]
gi|353780610|gb|EHD61067.1| CBS domain pair family protein [Streptococcus pneumoniae GA41410]
gi|353785008|gb|EHD65428.1| CBS domain pair family protein [Streptococcus pneumoniae GA49447]
gi|353815543|gb|EHD95759.1| CBS domain pair family protein [Streptococcus pneumoniae GA13637]
gi|353831380|gb|EHE11509.1| CBS domain pair family protein [Streptococcus pneumoniae GA17328]
gi|353836765|gb|EHE16853.1| CBS domain pair family protein [Streptococcus pneumoniae GA19077]
gi|353844117|gb|EHE24161.1| CBS domain pair family protein [Streptococcus pneumoniae GA41437]
gi|353876688|gb|EHE56537.1| CBS domain pair family protein [Streptococcus pneumoniae NP127]
gi|353877544|gb|EHE57387.1| CBS domain pair family protein [Streptococcus pneumoniae GA47751]
gi|353894748|gb|EHE74489.1| CBS domain pair family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379534471|gb|EHY99683.1| CBS domain protein [Streptococcus pneumoniae GA02270]
gi|379534770|gb|EHY99980.1| CBS domain protein [Streptococcus pneumoniae GA02714]
gi|379559888|gb|EHZ24915.1| CBS domain protein [Streptococcus pneumoniae GA14373]
gi|379581456|gb|EHZ46341.1| CBS domain protein [Streptococcus pneumoniae GA40563]
gi|379589597|gb|EHZ54436.1| CBS domain protein [Streptococcus pneumoniae GA43264]
gi|379590352|gb|EHZ55190.1| CBS domain protein [Streptococcus pneumoniae GA44386]
gi|395577279|gb|EJG37824.1| CBS domain pair family protein [Streptococcus pneumoniae 2090008]
gi|395596904|gb|EJG57113.1| CBS domain pair family protein [Streptococcus pneumoniae 2061376]
gi|395597996|gb|EJG58202.1| CBS domain pair family protein [Streptococcus pneumoniae 2072047]
gi|395602976|gb|EJG63117.1| CBS domain pair family protein [Streptococcus pneumoniae 2071247]
gi|395610241|gb|EJG70320.1| CBS domain pair family protein [Streptococcus pneumoniae 2081685]
gi|395877955|gb|EJG89024.1| CBS domain protein [Streptococcus pneumoniae SPAR55]
gi|395894860|gb|EJH05837.1| CBS domain pair family protein [Streptococcus pneumoniae GA56348]
gi|395912079|gb|EJH22942.1| CBS domain pair family protein [Streptococcus pneumoniae GA58981]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|421487791|ref|ZP_15935189.1| CBS domain protein [Streptococcus oralis SK304]
gi|400369753|gb|EJP22750.1| CBS domain protein [Streptococcus oralis SK304]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|322376938|ref|ZP_08051431.1| CBS domain protein [Streptococcus sp. M334]
gi|321282745|gb|EFX59752.1| CBS domain protein [Streptococcus sp. M334]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|452960137|gb|EME65467.1| hypothetical protein G352_10787 [Rhodococcus ruber BKS 20-38]
Length = 202
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 38/163 (23%)
Query: 89 MTTKEELHVVKPTTTVDEALEI------LVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
M ++ +H +P TV + + + L E+ PV+DD +LVG+++ D+L
Sbjct: 1 MRVRDVMH--RPVATVHQGVPVTEAAVPLAEQGYAALPVLDDRDRLVGILTSGDVLR--- 55
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
T +E + + V ++MT V V +L DA+RL
Sbjct: 56 -------------------GTMSE--------DTRTVAEVMTAPVVAVAAYQDLADASRL 88
Query: 203 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
LL R +PVV+ DG +VGI++RG+++R L+ A + Q
Sbjct: 89 LLSRGLRSIPVVEDDGHVVGIVSRGDLLRLLLKPDEAIGVSVQ 131
>gi|342163426|ref|YP_004768065.1| CBS domain-containing protein [Streptococcus pseudopneumoniae
IS7493]
gi|417850178|ref|ZP_12496093.1| CBS domain protein [Streptococcus mitis SK1080]
gi|418102469|ref|ZP_12739545.1| CBS domain pair family protein [Streptococcus pneumoniae NP070]
gi|419475146|ref|ZP_14014987.1| CBS domain protein [Streptococcus pneumoniae GA14688]
gi|419486256|ref|ZP_14026023.1| CBS domain protein [Streptococcus pneumoniae GA44128]
gi|339455511|gb|EGP68118.1| CBS domain protein [Streptococcus mitis SK1080]
gi|341933308|gb|AEL10205.1| CBS domain protein [Streptococcus pseudopneumoniae IS7493]
gi|353776635|gb|EHD57110.1| CBS domain pair family protein [Streptococcus pneumoniae NP070]
gi|379561484|gb|EHZ26501.1| CBS domain protein [Streptococcus pneumoniae GA14688]
gi|379589165|gb|EHZ54005.1| CBS domain protein [Streptococcus pneumoniae GA44128]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|291442683|ref|ZP_06582073.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291345578|gb|EFE72534.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 214
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT EE+ ++P T + E +L I PV+D+D VG+VS D+L
Sbjct: 6 TVGDVMT--EEVVTLRPDTPLHEVAALLDANDIVAAPVVDEDGAPVGIVSASDVL----- 58
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R + M D + ++ ++ K + G LM+ R + AAR L
Sbjct: 59 ----RHETGMP---DPQGQDGDD-ERSWGKARARTAGALMSSPVFTARADWTIPRAAREL 110
Query: 204 LETKYRRLPVVDADGKLVGIITR----GNVVRAALQIKHATEM 242
+ ++LPVV DG L GI+TR G +R+ +I+ E
Sbjct: 111 RSRRVKQLPVVGDDGLLTGIVTRSDLLGAFIRSDAEIRGEVEQ 153
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+ VGD+MT V +R T L + A LL PVVD DG VGI++ +V+R
Sbjct: 5 RTVGDVMTEEVVTLRPDTPLHEVAALLDANDIVAAPVVDEDGAPVGIVSASDVLR 59
>gi|59712578|ref|YP_205354.1| acetoin utilization AcuB protein [Vibrio fischeri ES114]
gi|197335338|ref|YP_002156799.1| acetoin utilization AcuB protein [Vibrio fischeri MJ11]
gi|423686751|ref|ZP_17661559.1| acetoin utilization AcuB protein [Vibrio fischeri SR5]
gi|59480679|gb|AAW86466.1| acetoin utilization AcuB protein [Vibrio fischeri ES114]
gi|197316828|gb|ACH66275.1| acetoin utilization AcuB protein [Vibrio fischeri MJ11]
gi|371494819|gb|EHN70417.1| acetoin utilization AcuB protein [Vibrio fischeri SR5]
Length = 147
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 22/155 (14%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TV D MTT H + + ++++A ++ E I P++D D L+GLV+ DLL+
Sbjct: 1 MFTVKDMMTTHP--HTLLRSHSLEDAKALMDEHCIRHIPIVDTDGALIGLVTQRDLLS-- 56
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
A +S + TF EV L N M ++M+ AP L++AA
Sbjct: 57 -------AQSSCLEK-----PTFEEVSTLDIPLNSIMHENVMSIAPY-----GGLKEAAL 99
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
+ + K LPVV+ GKLVGIIT + V A+ +
Sbjct: 100 FMQKHKVGCLPVVER-GKLVGIITDSDFVSIAINL 133
>gi|355571671|ref|ZP_09042899.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
gi|354825304|gb|EHF09534.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
Length = 157
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 13/138 (9%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR-ADNSMFPE----V 157
T+ EA +L E+ I G PV+D D +LVG++++ D+L L +GR +D+ P +
Sbjct: 19 TIREAAALLRERNIGGLPVMDGD-RLVGMITESDILRLLE---TGRISDDLWLPSPLEVI 74
Query: 158 DSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + F +K L+ K V +M+ V + E ++E+AA L+L K RLPV+
Sbjct: 75 EVPIREFINWEKTRHALTAIGEKEVRTVMSHPVVTIGEDADIEEAASLMLSKKIARLPVM 134
Query: 215 DADGKLVGIITRGNVVRA 232
+ LVGI+ R +++R
Sbjct: 135 RGN-TLVGIVARSDIIRG 151
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231
+V D+MT PV V + +AA LL E LPV+D D +LVG+IT +++R
Sbjct: 2 LVRDVMTKNPVTVSAGATIREAAALLRERNIGGLPVMDGD-RLVGMITESDILR 54
>gi|424819403|ref|ZP_18244503.1| Malate dehydrogenase [Candidatus Parvarchaeum acidiphilum
ARMAN-4_'5-way FS']
gi|326422420|gb|EGD71821.1| Malate dehydrogenase [Candidatus Parvarchaeum acidiphilum
ARMAN-4_'5-way FS']
Length = 462
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 33/137 (24%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E+ +VV T++E ++ EK++T FPV+D KL+G+++ D
Sbjct: 95 EKPYVVGKDFTIEELRNLVTEKKVTSFPVVDK-GKLIGIITRRDF--------------- 138
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
F E QK K V +LMT + + L DA +L+ + K +LP
Sbjct: 139 ----------EFEENQK-------KKVNELMTKDVITAHKGIPLNDAKQLMYKNKIEKLP 181
Query: 213 VVDADGKLVGIITRGNV 229
+VD +G L G+IT +V
Sbjct: 182 LVDKEGNLTGMITSKDV 198
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 164 FNEVQ-KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 222
FN ++ ++L T K +++ P VV + +E+ L+ E K PVVD GKL+G
Sbjct: 73 FNSIENEVLEITRVKREQNIIIEKPYVVGKDFTIEELRNLVTEKKVTSFPVVDK-GKLIG 131
Query: 223 IITRGNVVRAALQIKHATEM 242
IITR + Q K E+
Sbjct: 132 IITRRDFEFEENQKKKVNEL 151
>gi|307705243|ref|ZP_07642110.1| acetoin utilization protein acuB [Streptococcus mitis SK597]
gi|307621192|gb|EFO00262.1| acetoin utilization protein acuB [Streptococcus mitis SK597]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|393762522|ref|ZP_10351149.1| CBS domain-containing protein [Alishewanella agri BL06]
gi|392606757|gb|EIW89641.1| CBS domain-containing protein [Alishewanella agri BL06]
Length = 142
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 19/155 (12%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ TV D MT + VK +T+ EA +++ EK I PVI+D+ +LVG+++ ++A
Sbjct: 3 ITTVADLMTA--DPLSVKRASTLKEAHDLMREKNIRHIPVIEDNGELVGMLTQKVMIA-- 58
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
A S+ + ++ E Q+L+++ M+ D T P +L+ A
Sbjct: 59 -------AVMSLLAKYGASALERKEKQQLVAEL---MLTDFATVTP-----EQSLQQVAS 103
Query: 202 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 236
++ ++ LPVV++ KL+GI+T + VR A ++
Sbjct: 104 FFVQNRHGCLPVVNSQNKLLGILTSSDFVRLAAEL 138
>gi|418967448|ref|ZP_13519111.1| CBS domain protein [Streptococcus mitis SK616]
gi|419766389|ref|ZP_14292593.1| CBS domain protein [Streptococcus mitis SK579]
gi|383344061|gb|EID22231.1| CBS domain protein [Streptococcus mitis SK616]
gi|383354125|gb|EID31701.1| CBS domain protein [Streptococcus mitis SK579]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|383319115|ref|YP_005379956.1| hypothetical protein Mtc_0673 [Methanocella conradii HZ254]
gi|379320485|gb|AFC99437.1| CBS-domain-containing membrane protein [Methanocella conradii
HZ254]
Length = 261
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 26/154 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+VG MT E+ V +P +V +A ++ +TGFPV+ +++G+++ D+L
Sbjct: 127 SVGSLMT--REVVVCRPEDSVSKAWLNMINYGLTGFPVVGPKGEVIGMITREDVLK---- 180
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G R + E D +T VQK++S TPA + V+E +++ AA++
Sbjct: 181 RGYARIER----ESDGR-RTPTTVQKIMS-----------TPA-ITVKEDDSVKKAAKIF 223
Query: 204 LETKYRRLPVVDADGKLVGIITRGNVVRA--ALQ 235
+E R+PVV DG+L GII R +V+R ALQ
Sbjct: 224 MERDIGRVPVV-KDGRLAGIIDRYDVIRTCRALQ 256
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 37/181 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL------ 138
VGD M+T + + P V A EI+ E PV+++ ++VG+V+ D++
Sbjct: 3 VGDIMSTNPQY--IGPDEFVTHAREIMREYNYESLPVVEN-GRVVGMVTLQDIINVTSTR 59
Query: 139 --------------ALDSISGSGRA-------DNSMFPEVDSTWK-----TFNEVQKLLS 172
AL +G +A D P VD + + ++ K LS
Sbjct: 60 SDVTVTGYMRLTVPALSPETGLAKAASVIIGTDEGRVPVVDGNGRLVGMLSVKDIFKGLS 119
Query: 173 KTNGK--MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 230
+ + VG LMT VV R ++ A ++ PVV G+++G+ITR +V+
Sbjct: 120 ELELEDVSVGSLMTREVVVCRPEDSVSKAWLNMINYGLTGFPVVGPKGEVIGMITREDVL 179
Query: 231 R 231
+
Sbjct: 180 K 180
>gi|418977932|ref|ZP_13525739.1| CBS domain protein [Streptococcus mitis SK575]
gi|383349133|gb|EID27083.1| CBS domain protein [Streptococcus mitis SK575]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|307708907|ref|ZP_07645367.1| acetoin utilization protein acuB [Streptococcus mitis SK564]
gi|307620243|gb|EFN99359.1| acetoin utilization protein acuB [Streptococcus mitis SK564]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|149007633|ref|ZP_01831250.1| hypothetical protein CGSSp18BS74_04056 [Streptococcus pneumoniae
SP18-BS74]
gi|307127695|ref|YP_003879726.1| AcuB family protein [Streptococcus pneumoniae 670-6B]
gi|417676505|ref|ZP_12325918.1| CBS domain pair family protein [Streptococcus pneumoniae GA17545]
gi|418095856|ref|ZP_12732971.1| CBS domain pair family protein [Streptococcus pneumoniae GA16531]
gi|418112100|ref|ZP_12749103.1| CBS domain pair family protein [Streptococcus pneumoniae GA41538]
gi|418132595|ref|ZP_12769468.1| CBS domain pair family protein [Streptococcus pneumoniae GA11304]
gi|418154786|ref|ZP_12791517.1| CBS domain pair family protein [Streptococcus pneumoniae GA16242]
gi|418182349|ref|ZP_12818910.1| CBS domain pair family protein [Streptococcus pneumoniae GA43380]
gi|418225178|ref|ZP_12851807.1| CBS domain pair family protein [Streptococcus pneumoniae NP112]
gi|419466723|ref|ZP_14006606.1| CBS domain protein [Streptococcus pneumoniae GA05248]
gi|419512150|ref|ZP_14051784.1| CBS domain protein [Streptococcus pneumoniae GA05578]
gi|419516434|ref|ZP_14056052.1| CBS domain protein [Streptococcus pneumoniae GA02506]
gi|421282941|ref|ZP_15733730.1| CBS domain pair family protein [Streptococcus pneumoniae GA04216]
gi|147760788|gb|EDK67759.1| hypothetical protein CGSSp18BS74_04056 [Streptococcus pneumoniae
SP18-BS74]
gi|306484757|gb|ADM91626.1| AcuB family protein [Streptococcus pneumoniae 670-6B]
gi|332077170|gb|EGI87632.1| CBS domain pair family protein [Streptococcus pneumoniae GA17545]
gi|353770843|gb|EHD51354.1| CBS domain pair family protein [Streptococcus pneumoniae GA16531]
gi|353785749|gb|EHD66167.1| CBS domain pair family protein [Streptococcus pneumoniae GA41538]
gi|353806551|gb|EHD86824.1| CBS domain pair family protein [Streptococcus pneumoniae GA11304]
gi|353823078|gb|EHE03253.1| CBS domain pair family protein [Streptococcus pneumoniae GA16242]
gi|353850586|gb|EHE30590.1| CBS domain pair family protein [Streptococcus pneumoniae GA43380]
gi|353882486|gb|EHE62297.1| CBS domain pair family protein [Streptococcus pneumoniae NP112]
gi|379544846|gb|EHZ09990.1| CBS domain protein [Streptococcus pneumoniae GA05248]
gi|379636620|gb|EIA01178.1| CBS domain protein [Streptococcus pneumoniae GA05578]
gi|379640437|gb|EIA04976.1| CBS domain protein [Streptococcus pneumoniae GA02506]
gi|395882807|gb|EJG93851.1| CBS domain pair family protein [Streptococcus pneumoniae GA04216]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|418968741|ref|ZP_13520144.1| CBS domain protein [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383352531|gb|EID30223.1| CBS domain protein [Streptococcus pseudopneumoniae ATCC BAA-960]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 51 TVAQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|387626131|ref|YP_006062303.1| hypothetical protein INV104_06260 [Streptococcus pneumoniae INV104]
gi|417693680|ref|ZP_12342869.1| CBS domain pair family protein [Streptococcus pneumoniae GA47901]
gi|444383946|ref|ZP_21182119.1| CBS domain protein [Streptococcus pneumoniae PCS8106]
gi|444385509|ref|ZP_21183582.1| CBS domain protein [Streptococcus pneumoniae PCS8203]
gi|301793913|emb|CBW36309.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
gi|332204763|gb|EGJ18828.1| CBS domain pair family protein [Streptococcus pneumoniae GA47901]
gi|444247866|gb|ELU54393.1| CBS domain protein [Streptococcus pneumoniae PCS8106]
gi|444250111|gb|ELU56595.1| CBS domain protein [Streptococcus pneumoniae PCS8203]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|307702036|ref|ZP_07639044.1| AcuB family protein [Streptococcus mitis NCTC 12261]
gi|307616681|gb|EFN95870.1| AcuB family protein [Streptococcus mitis NCTC 12261]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|294140416|ref|YP_003556394.1| hypothetical protein SVI_1645 [Shewanella violacea DSS12]
gi|293326885|dbj|BAJ01616.1| CBS domain protein [Shewanella violacea DSS12]
Length = 195
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 25/129 (19%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
+ EA+E+ ++ + G PVID++ K++G +S+ D L +++T+
Sbjct: 75 IAEAVELFLQNQQIGGPVIDENRKVIGFLSEQDCL---------------IKMLEATY-- 117
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 223
NE N VGD+M P+ V++ +++ D A+ + K + P+VD + KL+G+
Sbjct: 118 LNE--------NHCDVGDVMHGDPLTVKKESSVLDLAQQMTHHKPKIYPIVDEEEKLIGV 169
Query: 224 ITRGNVVRA 232
I R V++A
Sbjct: 170 INRSAVLKA 178
>gi|345886495|ref|ZP_08837742.1| hypothetical protein HMPREF0178_00516 [Bilophila sp. 4_1_30]
gi|345038287|gb|EGW42759.1| hypothetical protein HMPREF0178_00516 [Bilophila sp. 4_1_30]
Length = 140
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT++ + ++ T T+ + ++ +I PV +D + VGL++ DLL
Sbjct: 4 VSDLMTSR--VFTLRRTDTLQDVRSLMQLAKIRHIPVTEDGDRFVGLLTHRDLL------ 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G A S E++ + E L VGD+M V T L +AA +L
Sbjct: 56 --GYA-VSHLAEINREEQEEIESSIL--------VGDIMQTDVRTVSPDTLLREAAEILY 104
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238
KY LPV+D D KLVGIIT + +R A+ + H
Sbjct: 105 RNKYGCLPVLDGDNKLVGIITEADFLRLAIALLH 138
>gi|407478610|ref|YP_006792487.1| hypothetical protein Eab7_2799 [Exiguobacterium antarcticum B7]
gi|407062689|gb|AFS71879.1| CBS domain containing membrane protein [Exiguobacterium antarcticum
B7]
Length = 151
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 147
+ + KE + V T+ +E + I+G PV++D ++VG +SD D++ +
Sbjct: 4 YQSMKETVITVNEQDTIRTVVERFITSGISGVPVVNDQQEVVGYISDGDIMRVIGKHKDI 63
Query: 148 RADNSMFPEV-DSTWKTFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
D ++ +V K + E V+ +L++ V D+ V T +E+ A L
Sbjct: 64 IVDTFLYVDVIKGDDKNYEERVRHILTRP----VMDMARRKVVTANVETEMEEIAATLGA 119
Query: 206 TKYRRLPVVDADGKLVGIITRGNVVRAALQ 235
+ ++LP++ DGKLVGII+RG+V+R + +
Sbjct: 120 KRIKKLPIL-KDGKLVGIISRGDVIRHSFK 148
>gi|303246714|ref|ZP_07332992.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
JJ]
gi|302492054|gb|EFL51932.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
JJ]
Length = 412
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 167
+++LV VI+ D + G+++ D+L ++ + + ++ +
Sbjct: 134 MDMLVSHDNKAVLVIESDGSVAGIITGGDILMRGGMAARLSLQDILPEDIRKNER----- 188
Query: 168 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 227
K +G+ G++MT V + + T+L DAA+L+ +RLPVVDA G+LVG+++R
Sbjct: 189 ----DKISGRTAGEVMTSPVVTINDRTSLRDAAQLMTGKGLKRLPVVDAAGELVGLVSRV 244
Query: 228 NVVRAA 233
+++RAA
Sbjct: 245 DILRAA 250
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 29/194 (14%)
Query: 57 SALRRSSAVFASGTLT-----------ANSAAPSSGV---YTVGDFMTTKEELHVVKPTT 102
L+R V A+G L A+ APS+ +T G F ++ + PT
Sbjct: 223 KGLKRLPVVDAAGELVGLVSRVDILRAASDLAPSAQALPRFTAGLFQQARDVMITDVPTA 282
Query: 103 TVDEALEILVEKRITGFP-----VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
D L +V I P V+D D + G++ D DLL R + P +
Sbjct: 283 FPDTPLHQVVAA-IVASPLRRAVVVDADKTVRGIILDSDLLR--------RCGPARKPGL 333
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+F + ++ + G ++M P + + E L + + +L K +RL VVD
Sbjct: 334 IEALFSFGKPEETGACPTGS-AAEVMEPNVLTIHEDATLMEVLQKMLAAKVKRLVVVDDA 392
Query: 218 GKLVGIITRGNVVR 231
GKL+G++ R ++R
Sbjct: 393 GKLLGMVDREAILR 406
>gi|289168243|ref|YP_003446512.1| hypothetical protein smi_1410 [Streptococcus mitis B6]
gi|288907810|emb|CBJ22650.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|146339451|ref|YP_001204499.1| hypothetical protein BRADO2437 [Bradyrhizobium sp. ORS 278]
gi|365891704|ref|ZP_09430092.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|146192257|emb|CAL76262.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
gi|365332322|emb|CCE02623.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 141
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 168
E+ +PV+++D +++G+V+ +D+L + + N M P
Sbjct: 31 EMFDRDDFNTYPVVEND-EVIGIVTKFDVLKCFAFTP-----NQMLPRY----------S 74
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 228
L+++T V D+MT + VR T L +L++E + R LPV D D +LVGII R +
Sbjct: 75 DLMNRT----VADVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDNRLVGIIARED 130
Query: 229 VVRA 232
+VRA
Sbjct: 131 IVRA 134
>gi|11499010|ref|NP_070244.1| chloride channel [Archaeoglobus fulgidus DSM 4304]
gi|2649157|gb|AAB89832.1| chloride channel, putative [Archaeoglobus fulgidus DSM 4304]
Length = 589
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 39/161 (24%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M + ++L VV P V E LE++ + GFPV+ D +LVG+V
Sbjct: 460 VQDAMVSADKLVVVTPYQRVSEVLELIEKTGHMGFPVVMDG-RLVGMV------------ 506
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKL-LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
TF +V+++ L + + K+V D+MT +V LE+A L
Sbjct: 507 ------------------TFEDVERVPLEERDKKLVRDIMTRELIVTYPDETLEEALIKL 548
Query: 204 LETKYRRLPVVDA--DGKLVGIITRGNVVRAALQIKHATEM 242
++ RLPVVD + KL+GIITR ++++A HA E+
Sbjct: 549 VDKGIGRLPVVDRNDEKKLLGIITRSDIMKA-----HAREV 584
>gi|402851097|ref|ZP_10899273.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402498627|gb|EJW10363.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 365
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ E+ V P V + E+L I+ PV+DD L+G+VS+ DL+ L + +
Sbjct: 5 DLMTS--EVVTVAPHVPVRKIAEVLHRNGISAVPVVDDRGALIGIVSEGDLIPLSAPDRN 62
Query: 147 GRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R D M E + F V+ L + + + ++M + V +L + A++L
Sbjct: 63 ERRDWWLRMLAEGEELGAAF--VEHL--EKDQRTAREIMKSPVITVPAEADLVEVAQVLA 118
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRA 232
RR PV+ A+G++VGI++R ++V A
Sbjct: 119 SHHIRRAPVM-ANGRMVGIVSRADLVEA 145
>gi|374998887|ref|YP_004974385.1| hypothetical protein AZOLI_p20005 [Azospirillum lipoferum 4B]
gi|357426312|emb|CBS89217.1| conserved protein of unknown function, Cystathionine beta-synthase
domain [Azospirillum lipoferum 4B]
Length = 233
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 22/153 (14%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT + + + TV +A ++E I+G PV+D K+VG++S+ DLL +
Sbjct: 5 DLMTPR--VITIGTDATVADAARKMLENNISGMPVLDAAGKVVGIISEGDLLRRVELGTE 62
Query: 147 -------GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
G P D K++ + V D+MT V E + E+
Sbjct: 63 RHRSWWLGLVSGGTLPAED------------FVKSHARKVADVMTAHVTTVDENASPEEV 110
Query: 200 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 232
RL+ + +R+PVV G L+GII+R N++RA
Sbjct: 111 VRLMETRRIKRVPVVR-QGTLIGIISRANLLRA 142
>gi|339444250|ref|YP_004710254.1| major facilitator superfamily permease [Eggerthella sp. YY7918]
gi|338904002|dbj|BAK43853.1| permease of the major facilitator superfamily [Eggerthella sp.
YY7918]
Length = 641
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
K +++ + ++TV EA++ LVEK I+ P+++ + + VG VSD D++ S + D
Sbjct: 481 KRDVYTLPSSSTVAEAMQFLVEKHISAAPLVNAEGQAVGFVSDGDIMRYLSKRSAMVMDP 540
Query: 152 -SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
M + T + ++ + L + G V + + + V +L + R+L + ++
Sbjct: 541 VVMIMQTVDTDSSNSDFARKLDQLMGMNVTAIGSKGIIGVDIHADLPEVCRVLGDNHLKK 600
Query: 211 LPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
+PV+D DG++VG+I R ++ ++Q K+ E G +
Sbjct: 601 VPVLD-DGQVVGVINRSDITHYSMQ-KYLAERGEK 633
>gi|432329144|ref|YP_007247288.1| putative transcriptional regulator, contains C-terminal CBS domains
[Aciduliprofundum sp. MAR08-339]
gi|432135853|gb|AGB05122.1| putative transcriptional regulator, contains C-terminal CBS domains
[Aciduliprofundum sp. MAR08-339]
Length = 161
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P T+ EA EI + I+G PV+D++ KL+G+++ D+L SG +FP
Sbjct: 15 LRPDMTIKEASEIFAKNGISGAPVVDENGKLLGILTIKDILKTVK-SGMESVGLYVFP-- 71
Query: 158 DSTWKTFNEV---------QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
T F E+ +L + + VGD+M ++ DA +L++ +
Sbjct: 72 --TPFDFMEIIPFEIPEGQVNVLKELSSIRVGDVMEKRVHYAEPDMDIYDALNILVKKEI 129
Query: 209 RRLPVVDADGKLVGIITRGNVVRA 232
RLPVV DG +VGI+TR +++RA
Sbjct: 130 SRLPVV-KDGMVVGIVTRSDLLRA 152
>gi|381159005|ref|ZP_09868238.1| CBS-domain-containing membrane protein [Thiorhodovibrio sp. 970]
gi|380880363|gb|EIC22454.1| CBS-domain-containing membrane protein [Thiorhodovibrio sp. 970]
Length = 138
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 29/152 (19%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
+ L +P + EA+ +L++KRI+G PV+D LVG++++ D L +
Sbjct: 13 QRLVTFRPDMDILEAVRVLIDKRISGAPVLDQLGNLVGMLTERDCLKV------------ 60
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+D+++ + +G V MTPA + V T + A + RRLP
Sbjct: 61 ---ALDASY----------YRESGGKVESFMTPAVINVSADTPAVEIAERFATSHLRRLP 107
Query: 213 VVDADGKLVGIITRGNVVRAALQIKHATEMGA 244
V++ +G+L+GI++R +V+R Q++ E+ A
Sbjct: 108 VLE-NGRLIGIVSRRDVLR---QLESGWELDA 135
>gi|337282449|ref|YP_004621920.1| CBS domain-containing protein [Streptococcus parasanguinis ATCC
15912]
gi|335370042|gb|AEH55992.1| CBS domain protein [Streptococcus parasanguinis ATCC 15912]
Length = 253
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 71 LTANSAAPSSG--VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
+ N S G V V DFMT K + + P TT+ A +++ E+ + PVI++D KL
Sbjct: 22 IKYNKTNKSIGELVMAVKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KL 78
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VGLV++ + S S S+F E+ LL+KT V D+M +
Sbjct: 79 VGLVTEG---TIAEASPSKATSLSIF-----------EMNYLLNKTK---VKDVMLRDVI 121
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 245
V + +LEDA L+ + K LPVVD + ++ G+IT ++ RA L++ E G +
Sbjct: 122 TVSKFASLEDATYLMYKNKVGILPVVDNE-QVSGVITDRDIFRAFLEVSGYGEEGVR 177
>gi|281421756|ref|ZP_06252755.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
gi|281404251|gb|EFB34931.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
Length = 494
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ +TV +AL+++ + I G PV+DD+ LVG+V++ DL R + M ++
Sbjct: 105 IRRGSTVKDALDMMHDYHIGGIPVVDDENHLVGIVTNRDL----------RFERHMDKKI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D + N V + T+L AA +L E K +LPVVD++
Sbjct: 155 DEVMTSENLVTTHIQ---------------------TDLVAAAAILQENKIEKLPVVDSE 193
Query: 218 GKLVGIITRGNVVRA 232
LVG+IT ++ +A
Sbjct: 194 NHLVGLITYKDITKA 208
>gi|307706956|ref|ZP_07643755.1| acetoin utilization protein acuB [Streptococcus mitis SK321]
gi|307617670|gb|EFN96838.1| acetoin utilization protein acuB [Streptococcus mitis SK321]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V +A L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQAFLEIAGYGEEG 140
>gi|90425526|ref|YP_533896.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
gi|90107540|gb|ABD89577.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB18]
Length = 242
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P ++ +A I++ + ++G PV++ +L+G++S+ D + I G+ R +
Sbjct: 14 VSPDASIVDAANIMLSQHVSGLPVVNAAGELIGIISEGDFIRRAEI-GTERKRGRWLRLL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
++ ++ +G+ VG++MT P V + + + + + +RLPV+ D
Sbjct: 73 LGPGQSASD----FVHEHGRKVGEIMTTHPHTVNAEATVAEIVKAMEKHHVKRLPVMQ-D 127
Query: 218 GKLVGIITRGNVVRA 232
G++VGI+TR N+++A
Sbjct: 128 GRMVGIVTRKNLLQA 142
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+MT V V ++ DAA ++L LPVV+A G+L+GII+ G+ +R A
Sbjct: 6 IMTRQVVTVSPDASIVDAANIMLSQHVSGLPVVNAAGELIGIISEGDFIRRA 57
>gi|90425521|ref|YP_533891.1| CBS domain-containing protein [Rhodopseudomonas palustris BisB18]
gi|90107535|gb|ABD89572.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
BisB18]
Length = 141
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ T+ E ++ +PV ++D +++GLV+ YD L + A M P
Sbjct: 20 VRRDMTMRELQDLFKRDDYNAYPV-EEDGEVIGLVTKYDFLKCFAF-----APIHMVPHY 73
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D +L+++T VGD+MTP + V L +L+++ + R +PVVD D
Sbjct: 74 D----------ELMNRT----VGDVMTPDFIYVHPEIKLTRVLQLMIDHQTRSIPVVDND 119
Query: 218 GKLVGIITRGNVVRA 232
KL+GII+R +++ A
Sbjct: 120 RKLMGIISREDIMHA 134
>gi|297197552|ref|ZP_06914949.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
gi|197715576|gb|EDY59610.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
Length = 223
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T E + ++ + +++ PV++ + ++VGLVS+ DLL + DS
Sbjct: 13 TFKEIVRLMQDWKVSALPVLEGEGRVVGLVSEADLLPKEEFR-------------DSDPD 59
Query: 163 TFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 220
+ ++++L L+K +LMT + R L AAR + ++ +RLPVV+ G L
Sbjct: 60 RYTQLRRLSDLAKAGAVTAEELMTSPALTTRPDATLAQAARTMAHSRVKRLPVVNELGML 119
Query: 221 VGIITRGNVVRAALQ 235
GI++R ++++ L+
Sbjct: 120 EGIVSRADLLKVFLR 134
>gi|146343631|ref|YP_001208679.1| hypothetical protein BRADO6870 [Bradyrhizobium sp. ORS 278]
gi|146196437|emb|CAL80464.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
Length = 249
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 32/147 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P T V EA I++ I G PVID +LVG+V+D D L LD +
Sbjct: 14 VTPGTPVAEAARIMLRNHIGGLPVIDASGRLVGMVTDGDFLRRAELGTERKQGRWLDLLV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + ++G+ VGD+M+ V V +L + A ++
Sbjct: 74 GRGR------------------IGADFVHSHGRTVGDIMSRPAVTVGTDASLAEIAEVME 115
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVR 231
+ +RLPV++ D +L G++T+ + V+
Sbjct: 116 KRSIKRLPVMNGD-QLAGMVTQTDFVQ 141
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 233
+MT + + V T + +AAR++L LPV+DA G+LVG++T G+ +R A
Sbjct: 6 IMTRSVITVTPGTPVAEAARIMLRNHIGGLPVIDASGRLVGMVTDGDFLRRA 57
>gi|168486753|ref|ZP_02711261.1| AcuB family protein [Streptococcus pneumoniae CDC1087-00]
gi|418184520|ref|ZP_12821068.1| CBS domain pair family protein [Streptococcus pneumoniae GA47283]
gi|418193391|ref|ZP_12829884.1| CBS domain pair family protein [Streptococcus pneumoniae GA47439]
gi|419510085|ref|ZP_14049729.1| CBS domain protein [Streptococcus pneumoniae NP141]
gi|419529862|ref|ZP_14069393.1| CBS domain protein [Streptococcus pneumoniae GA40028]
gi|421212754|ref|ZP_15669716.1| CBS domain pair family protein [Streptococcus pneumoniae 2070108]
gi|421214942|ref|ZP_15671873.1| CBS domain pair family protein [Streptococcus pneumoniae 2070109]
gi|183570232|gb|EDT90760.1| AcuB family protein [Streptococcus pneumoniae CDC1087-00]
gi|353852118|gb|EHE32108.1| CBS domain pair family protein [Streptococcus pneumoniae GA47283]
gi|353860114|gb|EHE40061.1| CBS domain pair family protein [Streptococcus pneumoniae GA47439]
gi|379574602|gb|EHZ39540.1| CBS domain protein [Streptococcus pneumoniae GA40028]
gi|379633278|gb|EHZ97847.1| CBS domain protein [Streptococcus pneumoniae NP141]
gi|395581161|gb|EJG41634.1| CBS domain pair family protein [Streptococcus pneumoniae 2070108]
gi|395582501|gb|EJG42963.1| CBS domain pair family protein [Streptococcus pneumoniae 2070109]
Length = 218
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 243
+ K LPVVD + ++ G+IT +V ++ L+I E G
Sbjct: 103 KNKIGILPVVD-NHQVYGVITDRDVFQSFLEIAGYGEEG 140
>gi|328952018|ref|YP_004369352.1| hypothetical protein Desac_0280 [Desulfobacca acetoxidans DSM
11109]
gi|328452342|gb|AEB08171.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
DSM 11109]
Length = 222
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T++ +AL ++ E +I PV+ KLVG++SD DL A S +
Sbjct: 14 VDENTSMMKALHLMKENKIRRLPVMSHG-KLVGIISDRDL---------KEASPSKATTL 63
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D +E+ LL++ + ++MT P+ ++ +E AA ++LE K LPVV+
Sbjct: 64 D-----VHELYYLLAEIK---IKEIMTKNPITIQPDETIERAAVVMLENKVSGLPVVNGK 115
Query: 218 GKLVGIITRGNVVRAALQIKHATEMGAQ 245
+LVGI+T+ ++ RA + I G Q
Sbjct: 116 SELVGIVTQSDIFRAFVNITGIYRGGVQ 143
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,674,915,714
Number of Sequences: 23463169
Number of extensions: 148852797
Number of successful extensions: 496646
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5308
Number of HSP's successfully gapped in prelim test: 4464
Number of HSP's that attempted gapping in prelim test: 469575
Number of HSP's gapped (non-prelim): 24780
length of query: 245
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 106
effective length of database: 9,097,814,876
effective search space: 964368376856
effective search space used: 964368376856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)