Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>025986
MISSSQYLEPSLQGQMDLETENRIAAILLKEAAELRQKAEKEGVHVYLQQPKMRGRPNSR
FLTATVLGVQQANRAVEMNEMWRVRQKELELNEKLKRRSKDRSSCSSHADIDNSSRSLTN
KHVVDDNGATASSSKRECESNHSSENEGLRDEEVEVFLHSRVKRGRGAVGSRMDEAGPYL
APSADSNGKLSASYDVWQHRVFGPEKPPSLKPCRSSDDDDDADRRKKRKERSSSSEKKHS
KEAQV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025986
        (245 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2134263 - symbol:AT4G33690 "AT4G33690" species...   363  2.5e-33   1


>TAIR|locus:2134263 [details] [associations]
            symbol:AT4G33690 "AT4G33690" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:BT010676 EMBL:BT010975 IPI:IPI00530954 RefSeq:NP_195095.2
            UniGene:At.31564 IntAct:Q6NPE9 EnsemblPlants:AT4G33690.1
            GeneID:829511 KEGG:ath:AT4G33690 TAIR:At4g33690 eggNOG:NOG267862
            HOGENOM:HOG000030146 InParanoid:Q6NPE9 OMA:CTSVDEN
            ProtClustDB:CLSN2681625 Genevestigator:Q6NPE9 Uniprot:Q6NPE9
        Length = 246

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 92/203 (45%), Positives = 114/203 (56%)

Query:    16 MDLETENRXXXXXXXXXXXXRQKAEKEGVHVYLQQPKMRGRPNSRFLTATVLGVQQANRA 75
             MDLETENR            R++AEK+GV  YL++P +R RPNSRFLTATVLGVQQAN+A
Sbjct:     1 MDLETENRIASILLREAAELRRQAEKDGVRAYLEKPNVRHRPNSRFLTATVLGVQQANKA 60

Query:    76 VEMNEMWRVRQKELELNEXXXXXXXXXXXXXXHADIDNSSRSLTNKHVVDDNGATAS--- 132
             VE NEMW +R KE+E  E               ++ +N    L     VD+N  T S   
Sbjct:    61 VETNEMWSLRSKEIEFGERLKRKSRDESSNG-QSEQNNRRDFLKRCTSVDENVTTTSLSP 119

Query:   133 SSKRECESNHSSEN---EGLRDEEVEVFLHSRVKRGRGAVGSRMDEAGPYLAPSADSNGK 189
             SS R       SE+   EGL D EV+ FL SRVKRGRG+VG+ MDE  P L P  +    
Sbjct:   120 SSSRSRSKRWQSEDDDDEGLGDVEVKTFLQSRVKRGRGSVGAMMDEPLPCL-PERE---- 174

Query:   190 LSASYDVWQHR-VFGPEKPPSLK 211
             LS + D    + V  PE+ P L+
Sbjct:   175 LSRTSDTGDRKLVIQPERSPLLR 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.126   0.355    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      245       190   0.00091  110 3  11 23  0.40    33
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  159 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.84u 0.16s 18.00t   Elapsed:  00:00:01
  Total cpu time:  17.84u 0.16s 18.00t   Elapsed:  00:00:01
  Start:  Sat May 11 11:11:09 2013   End:  Sat May 11 11:11:10 2013

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