Query 025988
Match_columns 245
No_of_seqs 288 out of 2727
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 11:53:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025988.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025988hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 1E-39 2.2E-44 273.1 19.3 224 2-237 20-248 (322)
2 PLN02824 hydrolase, alpha/beta 99.9 1.1E-25 2.3E-30 192.1 16.5 124 4-129 8-137 (294)
3 PRK00870 haloalkane dehalogena 99.9 3E-25 6.4E-30 190.2 17.4 124 4-128 19-149 (302)
4 PRK03592 haloalkane dehalogena 99.9 3.2E-25 7E-30 189.2 16.9 122 4-129 7-128 (295)
5 TIGR02240 PHA_depoly_arom poly 99.9 8.5E-25 1.8E-29 185.0 13.3 122 6-130 4-127 (276)
6 PRK03204 haloalkane dehalogena 99.9 8.1E-24 1.8E-28 180.2 16.3 124 4-130 14-137 (286)
7 PLN02679 hydrolase, alpha/beta 99.9 1.2E-23 2.6E-28 184.7 14.9 120 7-129 64-191 (360)
8 TIGR03343 biphenyl_bphD 2-hydr 99.9 9.6E-23 2.1E-27 172.3 15.4 124 4-129 5-136 (282)
9 PLN02965 Probable pheophorbida 99.9 9.8E-23 2.1E-27 170.5 14.3 102 27-129 5-107 (255)
10 TIGR03056 bchO_mg_che_rel puta 99.9 2.5E-22 5.5E-27 168.7 15.9 123 5-130 7-131 (278)
11 PLN02578 hydrolase 99.9 2E-22 4.4E-27 176.6 15.9 119 7-129 69-187 (354)
12 PLN03084 alpha/beta hydrolase 99.9 1.8E-22 3.9E-27 177.9 15.6 123 7-130 108-233 (383)
13 PLN03087 BODYGUARD 1 domain co 99.9 3E-22 6.6E-27 180.2 16.3 126 4-130 176-310 (481)
14 PRK06489 hypothetical protein; 99.9 3.2E-22 7E-27 175.7 12.9 118 10-128 46-188 (360)
15 PRK10349 carboxylesterase BioH 99.9 4.1E-22 9E-27 166.5 11.5 105 16-128 4-108 (256)
16 PRK10749 lysophospholipase L2; 99.9 1.9E-21 4.2E-26 168.8 16.0 124 6-129 33-166 (330)
17 PLN02211 methyl indole-3-aceta 99.9 2.9E-21 6.2E-26 163.6 14.7 118 11-129 4-122 (273)
18 PRK10673 acyl-CoA esterase; Pr 99.9 2.5E-21 5.4E-26 161.2 13.1 99 26-128 17-115 (255)
19 PRK11126 2-succinyl-6-hydroxy- 99.9 2.1E-21 4.7E-26 160.5 12.5 99 26-129 3-102 (242)
20 TIGR01249 pro_imino_pep_1 prol 99.9 4.3E-21 9.2E-26 165.0 14.1 125 4-130 4-131 (306)
21 PLN02385 hydrolase; alpha/beta 99.9 5.4E-21 1.2E-25 167.2 14.8 120 9-129 67-197 (349)
22 PF12697 Abhydrolase_6: Alpha/ 99.9 3.1E-21 6.8E-26 155.5 11.8 102 28-130 1-102 (228)
23 PRK08775 homoserine O-acetyltr 99.9 1.6E-21 3.5E-26 170.2 10.1 118 7-129 39-173 (343)
24 TIGR01250 pro_imino_pep_2 prol 99.9 1.8E-20 3.8E-25 157.1 14.9 123 8-130 6-132 (288)
25 PRK07581 hypothetical protein; 99.9 2.5E-21 5.4E-26 168.6 9.9 120 10-129 22-159 (339)
26 TIGR03611 RutD pyrimidine util 99.9 7.3E-21 1.6E-25 157.2 12.2 112 16-129 1-115 (257)
27 PLN02298 hydrolase, alpha/beta 99.8 2.3E-20 5E-25 161.9 15.4 119 10-129 39-169 (330)
28 TIGR02427 protocat_pcaD 3-oxoa 99.8 1E-20 2.2E-25 155.1 10.8 111 16-129 2-114 (251)
29 PHA02857 monoglyceride lipase; 99.8 5.1E-20 1.1E-24 155.6 15.3 122 8-130 5-133 (276)
30 TIGR01392 homoserO_Ac_trn homo 99.8 1.6E-20 3.4E-25 164.4 11.1 121 10-130 12-163 (351)
31 TIGR03695 menH_SHCHC 2-succiny 99.8 8.3E-20 1.8E-24 149.3 12.8 104 26-130 2-106 (251)
32 PRK00175 metX homoserine O-ace 99.8 5.8E-20 1.3E-24 162.5 11.4 121 10-130 29-183 (379)
33 PRK14875 acetoin dehydrogenase 99.8 8.7E-19 1.9E-23 153.9 15.4 120 7-129 112-232 (371)
34 PRK05855 short chain dehydroge 99.8 4.1E-19 9E-24 164.5 14.0 123 5-128 4-130 (582)
35 TIGR01738 bioH putative pimelo 99.8 2.8E-19 6.1E-24 146.2 9.8 100 22-129 1-100 (245)
36 COG2267 PldB Lysophospholipase 99.8 1.6E-18 3.6E-23 148.2 14.8 127 5-132 11-145 (298)
37 KOG4409 Predicted hydrolase/ac 99.8 1.1E-18 2.5E-23 147.3 13.3 126 6-132 67-198 (365)
38 TIGR03101 hydr2_PEP hydrolase, 99.8 8.2E-18 1.8E-22 141.2 15.2 103 26-130 26-135 (266)
39 PLN02894 hydrolase, alpha/beta 99.8 3.9E-18 8.5E-23 151.8 13.6 103 26-130 106-212 (402)
40 PLN02980 2-oxoglutarate decarb 99.7 1.7E-17 3.6E-22 168.7 15.4 112 16-128 1360-1479(1655)
41 KOG1454 Predicted hydrolase/ac 99.7 2.7E-17 5.9E-22 142.2 12.5 106 25-130 58-167 (326)
42 PLN02652 hydrolase; alpha/beta 99.7 3.5E-17 7.7E-22 145.1 13.2 116 12-129 119-245 (395)
43 PLN02511 hydrolase 99.7 1.7E-16 3.6E-21 140.8 13.5 122 7-130 74-211 (388)
44 COG1647 Esterase/lipase [Gener 99.7 2.2E-16 4.8E-21 125.6 10.8 101 27-131 17-120 (243)
45 KOG2564 Predicted acetyltransf 99.7 2.2E-16 4.7E-21 129.5 11.0 119 7-128 51-181 (343)
46 TIGR01607 PST-A Plasmodium sub 99.7 7.2E-16 1.6E-20 134.1 13.1 119 11-129 5-185 (332)
47 TIGR03100 hydr1_PEP hydrolase, 99.7 3.1E-15 6.8E-20 126.7 15.3 100 26-130 27-135 (274)
48 PRK11071 esterase YqiA; Provis 99.6 1.2E-15 2.7E-20 122.4 11.0 89 26-130 2-94 (190)
49 PRK10985 putative hydrolase; P 99.6 6.9E-15 1.5E-19 127.5 16.1 124 7-130 34-169 (324)
50 TIGR03230 lipo_lipase lipoprot 99.6 3.5E-15 7.7E-20 132.6 13.5 103 25-129 41-154 (442)
51 PRK05077 frsA fermentation/res 99.6 8.8E-15 1.9E-19 130.7 15.7 102 26-129 195-300 (414)
52 PRK10566 esterase; Provisional 99.6 7.5E-15 1.6E-19 122.1 13.7 113 15-127 14-140 (249)
53 PLN02872 triacylglycerol lipas 99.6 1.2E-15 2.5E-20 135.2 9.2 125 4-129 44-197 (395)
54 KOG1455 Lysophospholipase [Lip 99.6 1.1E-14 2.3E-19 121.2 14.3 117 12-129 36-164 (313)
55 COG0596 MhpC Predicted hydrola 99.6 1.3E-14 2.8E-19 118.1 14.0 117 10-130 6-124 (282)
56 PRK06765 homoserine O-acetyltr 99.6 3.1E-15 6.7E-20 132.3 10.7 119 12-130 39-197 (389)
57 cd00707 Pancreat_lipase_like P 99.6 2.9E-15 6.3E-20 126.9 9.7 114 14-129 25-147 (275)
58 PF06342 DUF1057: Alpha/beta h 99.6 5.9E-14 1.3E-18 116.1 14.9 104 27-133 37-141 (297)
59 TIGR01836 PHA_synth_III_C poly 99.6 1.3E-14 2.8E-19 127.1 11.7 101 26-131 63-173 (350)
60 PRK13604 luxD acyl transferase 99.6 4.6E-14 9.9E-19 119.9 13.2 119 7-129 12-141 (307)
61 PF00561 Abhydrolase_1: alpha/ 99.6 1.2E-14 2.7E-19 118.2 8.6 76 53-128 1-78 (230)
62 TIGR01838 PHA_synth_I poly(R)- 99.5 6.7E-14 1.4E-18 127.7 12.5 106 26-131 189-304 (532)
63 KOG2984 Predicted hydrolase [G 99.5 9.2E-15 2E-19 114.8 5.7 125 5-129 22-149 (277)
64 TIGR03502 lipase_Pla1_cef extr 99.5 8.7E-14 1.9E-18 130.8 12.4 109 7-115 421-576 (792)
65 PF12695 Abhydrolase_5: Alpha/ 99.5 1.4E-13 3E-18 104.7 11.2 93 27-127 1-93 (145)
66 PLN00021 chlorophyllase 99.5 2.1E-13 4.6E-18 117.3 12.7 102 26-129 53-166 (313)
67 KOG2382 Predicted alpha/beta h 99.5 1.1E-13 2.4E-18 116.7 10.5 102 25-129 52-159 (315)
68 KOG2565 Predicted hydrolases o 99.5 4.2E-14 9.1E-19 120.1 7.8 126 3-129 123-264 (469)
69 TIGR02821 fghA_ester_D S-formy 99.5 7.7E-13 1.7E-17 112.1 12.9 106 25-130 42-174 (275)
70 PRK07868 acyl-CoA synthetase; 99.5 3.9E-13 8.5E-18 132.2 11.9 101 26-129 68-177 (994)
71 TIGR01840 esterase_phb esteras 99.4 1.1E-12 2.5E-17 106.8 11.7 105 25-129 13-130 (212)
72 PLN02442 S-formylglutathione h 99.4 4.3E-12 9.3E-17 108.0 13.6 107 24-130 46-179 (283)
73 TIGR00976 /NonD putative hydro 99.4 1.1E-12 2.5E-17 121.3 10.5 115 12-129 5-132 (550)
74 PF12146 Hydrolase_4: Putative 99.4 4.4E-12 9.4E-17 87.0 8.1 76 13-89 1-79 (79)
75 PRK11460 putative hydrolase; P 99.3 2E-11 4.3E-16 101.0 12.3 105 25-129 16-138 (232)
76 PF07819 PGAP1: PGAP1-like pro 99.3 6.2E-11 1.3E-15 97.5 11.9 108 23-132 3-126 (225)
77 COG2021 MET2 Homoserine acetyl 99.3 3E-11 6.4E-16 103.6 10.0 119 12-130 34-183 (368)
78 PF00975 Thioesterase: Thioest 99.2 8.3E-11 1.8E-15 96.5 11.5 99 27-129 2-104 (229)
79 PLN02733 phosphatidylcholine-s 99.2 1E-10 2.2E-15 104.7 10.3 123 6-131 70-203 (440)
80 KOG2931 Differentiation-relate 99.2 9.5E-10 2E-14 91.4 14.6 129 5-134 23-162 (326)
81 PF03096 Ndr: Ndr family; Int 99.2 5.8E-10 1.3E-14 93.3 12.7 127 7-134 2-139 (283)
82 PF12740 Chlorophyllase2: Chlo 99.1 5.9E-10 1.3E-14 92.4 10.7 102 26-129 18-131 (259)
83 PRK10252 entF enterobactin syn 99.1 1.1E-09 2.5E-14 110.6 12.1 102 21-128 1065-1170(1296)
84 PRK10162 acetyl esterase; Prov 99.1 2.4E-09 5.1E-14 92.7 12.3 101 25-130 81-196 (318)
85 KOG4667 Predicted esterase [Li 99.0 3.3E-09 7.1E-14 84.6 11.0 107 20-130 29-140 (269)
86 PF06500 DUF1100: Alpha/beta h 99.0 7.1E-10 1.5E-14 97.4 7.6 103 26-130 191-297 (411)
87 KOG1552 Predicted alpha/beta h 99.0 5.1E-09 1.1E-13 85.9 12.0 96 26-128 61-162 (258)
88 PF10230 DUF2305: Uncharacteri 99.0 4.5E-09 9.7E-14 88.7 12.1 105 26-130 3-123 (266)
89 COG0412 Dienelactone hydrolase 99.0 9.3E-09 2E-13 85.2 13.4 104 26-130 28-147 (236)
90 PF02230 Abhydrolase_2: Phosph 99.0 1.2E-09 2.6E-14 89.3 7.9 110 22-131 11-142 (216)
91 KOG2624 Triglyceride lipase-ch 99.0 2.3E-09 4.9E-14 94.6 9.6 129 4-132 48-202 (403)
92 KOG4391 Predicted alpha/beta h 99.0 2E-09 4.4E-14 85.9 7.9 113 12-129 63-184 (300)
93 TIGR01839 PHA_synth_II poly(R) 99.0 6.8E-09 1.5E-13 94.6 11.7 101 26-131 216-330 (560)
94 PF01674 Lipase_2: Lipase (cla 99.0 8.6E-10 1.9E-14 89.9 5.1 88 27-115 3-96 (219)
95 PF07224 Chlorophyllase: Chlor 98.9 2.9E-09 6.4E-14 87.3 7.8 101 26-129 47-157 (307)
96 KOG1838 Alpha/beta hydrolase [ 98.9 5.7E-08 1.2E-12 85.0 15.9 123 6-130 95-236 (409)
97 COG0429 Predicted hydrolase of 98.9 1.8E-08 3.9E-13 85.5 11.6 102 26-129 76-185 (345)
98 PF01738 DLH: Dienelactone hyd 98.9 2.1E-09 4.6E-14 87.8 5.9 101 26-127 15-130 (218)
99 PF05728 UPF0227: Uncharacteri 98.9 2.6E-08 5.6E-13 79.5 11.1 88 28-131 2-93 (187)
100 COG3571 Predicted hydrolase of 98.9 4.9E-08 1.1E-12 74.5 11.8 115 20-134 9-129 (213)
101 COG3319 Thioesterase domains o 98.9 3.1E-08 6.7E-13 82.6 11.7 100 26-130 1-104 (257)
102 COG0400 Predicted esterase [Ge 98.8 8.5E-09 1.9E-13 83.4 7.4 106 26-132 19-137 (207)
103 PF06028 DUF915: Alpha/beta hy 98.8 3.6E-08 7.9E-13 82.3 11.1 105 27-131 13-145 (255)
104 PF06821 Ser_hydrolase: Serine 98.8 2.3E-08 5E-13 78.7 9.3 89 28-130 1-92 (171)
105 COG1506 DAP2 Dipeptidyl aminop 98.8 4.9E-08 1.1E-12 91.8 12.2 114 12-127 374-505 (620)
106 PF10503 Esterase_phd: Esteras 98.8 5E-08 1.1E-12 79.7 10.7 106 25-130 16-133 (220)
107 PF00326 Peptidase_S9: Prolyl 98.8 5.9E-09 1.3E-13 84.8 5.3 90 41-130 3-100 (213)
108 PF02129 Peptidase_S15: X-Pro 98.8 6.2E-08 1.3E-12 81.9 10.8 101 26-129 21-136 (272)
109 PF00151 Lipase: Lipase; Inte 98.7 8.6E-09 1.9E-13 89.4 4.1 105 24-130 70-188 (331)
110 COG3208 GrsT Predicted thioest 98.7 6.4E-08 1.4E-12 78.9 8.2 100 26-128 8-111 (244)
111 COG1075 LipA Predicted acetylt 98.6 1.3E-07 2.7E-12 82.5 8.9 100 27-130 61-165 (336)
112 PF05448 AXE1: Acetyl xylan es 98.6 5.7E-07 1.2E-11 77.8 12.8 115 12-128 65-208 (320)
113 PF12715 Abhydrolase_7: Abhydr 98.6 1.9E-07 4.2E-12 81.1 9.7 101 26-127 116-258 (390)
114 COG3509 LpqC Poly(3-hydroxybut 98.6 3.7E-07 8.1E-12 76.4 10.7 122 8-129 39-179 (312)
115 PF07859 Abhydrolase_3: alpha/ 98.6 8.4E-08 1.8E-12 77.6 6.7 97 28-129 1-110 (211)
116 PF03403 PAF-AH_p_II: Platelet 98.6 5E-08 1.1E-12 86.3 5.7 106 25-131 100-264 (379)
117 PF05057 DUF676: Putative seri 98.6 6.4E-07 1.4E-11 73.4 10.0 85 26-113 5-97 (217)
118 COG2945 Predicted hydrolase of 98.5 1.5E-06 3.2E-11 68.4 11.4 103 25-129 28-137 (210)
119 PRK10115 protease 2; Provision 98.5 1.1E-06 2.3E-11 83.6 12.8 117 12-128 425-558 (686)
120 PF02273 Acyl_transf_2: Acyl t 98.5 2.2E-06 4.7E-11 70.0 12.3 118 7-128 5-133 (294)
121 smart00824 PKS_TE Thioesterase 98.5 9.1E-07 2E-11 70.7 10.1 95 30-129 2-102 (212)
122 PF06057 VirJ: Bacterial virul 98.5 1.1E-06 2.4E-11 69.5 9.6 96 27-129 4-107 (192)
123 TIGR01849 PHB_depoly_PhaZ poly 98.5 1.4E-06 3.1E-11 77.2 10.9 102 26-131 103-210 (406)
124 PTZ00472 serine carboxypeptida 98.5 2.8E-06 6.2E-11 77.1 12.5 104 25-129 77-216 (462)
125 PF05990 DUF900: Alpha/beta hy 98.4 1.2E-06 2.6E-11 72.5 8.9 103 26-129 19-137 (233)
126 COG4757 Predicted alpha/beta h 98.4 9.7E-07 2.1E-11 71.4 7.6 111 12-124 14-133 (281)
127 KOG1553 Predicted alpha/beta h 98.4 2E-06 4.4E-11 73.3 8.7 99 23-126 241-342 (517)
128 PF05677 DUF818: Chlamydia CHL 98.4 1.1E-05 2.5E-10 69.0 13.1 114 8-127 116-252 (365)
129 COG4188 Predicted dienelactone 98.3 1.9E-06 4.1E-11 74.5 8.1 92 26-117 72-182 (365)
130 COG4814 Uncharacterized protei 98.3 6.5E-06 1.4E-10 67.5 10.0 104 27-130 47-177 (288)
131 PRK04940 hypothetical protein; 98.3 5.3E-06 1.2E-10 65.3 9.0 86 28-131 2-94 (180)
132 COG0657 Aes Esterase/lipase [L 98.3 7.9E-06 1.7E-10 70.4 10.9 101 25-130 79-192 (312)
133 COG3458 Acetyl esterase (deace 98.3 7.4E-07 1.6E-11 73.6 3.8 99 26-126 84-207 (321)
134 PF02450 LCAT: Lecithin:choles 98.2 1.2E-05 2.7E-10 71.4 11.3 109 12-131 38-162 (389)
135 COG3243 PhaC Poly(3-hydroxyalk 98.2 2.5E-06 5.4E-11 74.7 6.4 106 25-130 107-218 (445)
136 PRK10439 enterobactin/ferric e 98.2 1.2E-05 2.6E-10 71.9 10.8 102 25-129 209-323 (411)
137 PF00756 Esterase: Putative es 98.2 2E-06 4.4E-11 71.4 5.0 52 79-130 97-151 (251)
138 COG4099 Predicted peptidase [G 98.2 1.5E-05 3.2E-10 66.9 9.5 98 26-130 192-305 (387)
139 COG3545 Predicted esterase of 98.2 2.9E-05 6.3E-10 60.4 10.6 91 27-130 4-95 (181)
140 KOG1515 Arylacetamide deacetyl 98.1 5E-05 1.1E-09 65.9 12.2 103 25-132 90-210 (336)
141 PF12048 DUF3530: Protein of u 98.1 0.0003 6.5E-09 60.7 16.7 106 27-132 89-232 (310)
142 KOG3975 Uncharacterized conser 98.1 0.00012 2.7E-09 60.0 13.0 125 5-129 2-147 (301)
143 PRK05371 x-prolyl-dipeptidyl a 98.1 2.2E-05 4.8E-10 75.5 10.1 82 44-128 271-372 (767)
144 PF08538 DUF1749: Protein of u 98.1 0.00012 2.6E-09 62.3 13.1 108 14-130 21-149 (303)
145 KOG3847 Phospholipase A2 (plat 98.0 2E-05 4.4E-10 66.5 7.4 108 24-132 117-278 (399)
146 KOG3724 Negative regulator of 98.0 7E-05 1.5E-09 70.1 10.9 100 27-131 91-222 (973)
147 KOG4627 Kynurenine formamidase 98.0 3.4E-05 7.3E-10 61.6 7.6 97 26-130 68-173 (270)
148 KOG2112 Lysophospholipase [Lip 98.0 3.6E-05 7.8E-10 61.5 7.8 101 27-127 5-126 (206)
149 cd00312 Esterase_lipase Estera 98.0 2.7E-05 5.9E-10 71.3 8.3 104 25-130 95-214 (493)
150 KOG3043 Predicted hydrolase re 97.9 2.2E-05 4.8E-10 63.3 5.8 121 8-129 22-154 (242)
151 COG2936 Predicted acyl esteras 97.9 6.2E-05 1.3E-09 68.9 9.0 121 8-129 23-159 (563)
152 PLN02606 palmitoyl-protein thi 97.9 7.5E-05 1.6E-09 63.4 8.9 99 25-129 26-132 (306)
153 PF03959 FSH1: Serine hydrolas 97.8 5.7E-05 1.2E-09 61.6 7.2 104 26-130 5-146 (212)
154 KOG2281 Dipeptidyl aminopeptid 97.8 7.2E-05 1.6E-09 68.6 8.0 103 22-124 639-757 (867)
155 KOG2100 Dipeptidyl aminopeptid 97.8 0.0004 8.6E-09 66.8 13.0 123 5-129 499-644 (755)
156 COG0627 Predicted esterase [Ge 97.8 0.00012 2.7E-09 63.0 8.7 107 26-132 55-190 (316)
157 PF05577 Peptidase_S28: Serine 97.7 0.00059 1.3E-08 61.6 11.4 105 27-131 30-150 (434)
158 PF02089 Palm_thioest: Palmito 97.6 6.7E-05 1.5E-09 63.1 4.6 104 25-129 5-116 (279)
159 PLN02633 palmitoyl protein thi 97.6 0.00057 1.2E-08 58.2 10.2 97 27-129 27-131 (314)
160 PF06441 EHN: Epoxide hydrolas 97.6 0.00012 2.6E-09 53.3 5.3 44 2-45 66-112 (112)
161 KOG2541 Palmitoyl protein thio 97.6 0.00069 1.5E-08 56.2 10.2 99 26-129 24-128 (296)
162 PF00450 Peptidase_S10: Serine 97.6 0.0012 2.6E-08 58.9 11.8 121 8-129 15-181 (415)
163 PF03583 LIP: Secretory lipase 97.5 0.00034 7.3E-09 59.9 7.5 86 44-129 18-113 (290)
164 PF00135 COesterase: Carboxyle 97.5 0.00028 6.2E-09 64.9 6.8 106 25-130 125-246 (535)
165 COG3150 Predicted esterase [Ge 97.4 0.0015 3.3E-08 50.5 9.3 90 28-131 2-93 (191)
166 PF09752 DUF2048: Uncharacteri 97.4 0.0017 3.8E-08 56.2 10.8 103 25-128 92-209 (348)
167 PLN02517 phosphatidylcholine-s 97.4 0.00044 9.6E-09 63.6 7.3 91 39-131 156-265 (642)
168 KOG2369 Lecithin:cholesterol a 97.3 0.00019 4.2E-09 63.8 3.9 90 39-131 124-227 (473)
169 KOG3967 Uncharacterized conser 97.3 0.0039 8.3E-08 50.2 10.8 106 26-132 102-230 (297)
170 COG4782 Uncharacterized protei 97.3 0.0014 2.9E-08 56.8 8.9 102 27-128 118-233 (377)
171 cd00741 Lipase Lipase. Lipase 97.3 0.00057 1.2E-08 52.5 6.1 52 79-130 9-68 (153)
172 COG2272 PnbA Carboxylesterase 97.2 0.0013 2.7E-08 59.2 7.3 107 23-130 92-218 (491)
173 PF01764 Lipase_3: Lipase (cla 97.1 0.001 2.2E-08 50.0 5.1 36 79-114 49-84 (140)
174 PF10340 DUF2424: Protein of u 97.0 0.0077 1.7E-07 52.9 10.4 103 25-130 122-236 (374)
175 COG3946 VirJ Type IV secretory 96.9 0.0042 9.2E-08 54.5 7.9 84 27-117 262-349 (456)
176 KOG2183 Prolylcarboxypeptidase 96.8 0.0054 1.2E-07 54.0 7.7 103 27-129 82-202 (492)
177 PF11339 DUF3141: Protein of u 96.8 0.0082 1.8E-07 54.4 9.1 79 44-130 93-176 (581)
178 KOG3101 Esterase D [General fu 96.7 0.00085 1.8E-08 53.9 1.9 101 26-126 45-173 (283)
179 PF11187 DUF2974: Protein of u 96.6 0.0068 1.5E-07 49.8 6.7 49 82-131 73-125 (224)
180 PF11144 DUF2920: Protein of u 96.6 0.025 5.3E-07 50.1 10.2 37 95-131 185-221 (403)
181 COG2382 Fes Enterochelin ester 96.6 0.0067 1.5E-07 51.4 6.3 114 14-130 83-213 (299)
182 PF08840 BAAT_C: BAAT / Acyl-C 96.5 0.0065 1.4E-07 49.5 6.1 49 81-130 6-57 (213)
183 PF06259 Abhydrolase_8: Alpha/ 96.5 0.0096 2.1E-07 47.0 6.7 55 77-131 87-146 (177)
184 cd00519 Lipase_3 Lipase (class 96.4 0.0063 1.4E-07 50.0 5.4 24 92-115 126-149 (229)
185 KOG4840 Predicted hydrolases o 96.4 0.055 1.2E-06 44.1 10.4 97 27-128 38-143 (299)
186 KOG2551 Phospholipase/carboxyh 96.4 0.036 7.8E-07 45.0 9.4 102 26-130 6-148 (230)
187 PF07082 DUF1350: Protein of u 96.3 0.11 2.4E-06 43.1 11.9 90 27-127 19-123 (250)
188 COG2819 Predicted hydrolase of 96.2 0.01 2.2E-07 49.5 5.4 50 81-130 121-173 (264)
189 PF01083 Cutinase: Cutinase; 95.9 0.021 4.6E-07 45.2 5.9 52 80-131 67-124 (179)
190 PLN02162 triacylglycerol lipas 95.9 0.019 4.1E-07 51.7 6.1 53 77-129 261-321 (475)
191 PLN02209 serine carboxypeptida 95.8 0.14 3.1E-06 46.3 11.4 103 25-128 68-211 (437)
192 PLN03016 sinapoylglucose-malat 95.8 0.073 1.6E-06 48.1 9.4 121 7-128 40-209 (433)
193 PLN00413 triacylglycerol lipas 95.8 0.025 5.3E-07 51.1 6.2 51 79-129 269-327 (479)
194 KOG2182 Hydrolytic enzymes of 95.7 0.16 3.4E-06 46.0 11.1 107 24-130 85-208 (514)
195 COG2939 Carboxypeptidase C (ca 95.7 0.058 1.3E-06 48.9 8.2 103 25-128 101-235 (498)
196 PF04083 Abhydro_lipase: Parti 95.7 0.026 5.5E-07 36.7 4.4 38 4-41 12-59 (63)
197 KOG4372 Predicted alpha/beta h 95.5 0.018 3.9E-07 50.7 4.3 86 26-112 81-168 (405)
198 KOG1516 Carboxylesterase and r 95.5 0.059 1.3E-06 50.1 8.0 105 25-129 112-232 (545)
199 PLN02454 triacylglycerol lipas 95.4 0.038 8.3E-07 49.2 6.0 35 80-114 212-248 (414)
200 PF05277 DUF726: Protein of un 95.4 0.058 1.3E-06 47.1 7.0 40 92-131 218-262 (345)
201 PLN02571 triacylglycerol lipas 95.3 0.026 5.6E-07 50.3 4.6 37 78-114 208-246 (413)
202 COG1505 Serine proteases of th 94.9 0.023 5.1E-07 52.3 3.2 118 6-125 396-531 (648)
203 PF11288 DUF3089: Protein of u 94.8 0.064 1.4E-06 43.4 5.2 70 45-115 39-116 (207)
204 PLN02408 phospholipase A1 94.8 0.046 1E-06 48.0 4.7 36 79-114 183-220 (365)
205 PLN02310 triacylglycerol lipas 94.7 0.079 1.7E-06 47.2 6.1 51 78-128 189-247 (405)
206 PLN02934 triacylglycerol lipas 94.7 0.1 2.2E-06 47.6 6.7 36 78-113 305-340 (515)
207 PF05576 Peptidase_S37: PS-10 94.6 0.1 2.2E-06 46.4 6.3 112 16-129 54-169 (448)
208 KOG3253 Predicted alpha/beta h 94.5 0.073 1.6E-06 49.3 5.3 98 25-131 176-288 (784)
209 PF04301 DUF452: Protein of un 94.2 0.21 4.5E-06 40.7 6.9 78 26-129 12-90 (213)
210 KOG1282 Serine carboxypeptidas 94.2 0.51 1.1E-05 42.9 10.0 121 7-128 47-212 (454)
211 PLN02213 sinapoylglucose-malat 94.1 0.33 7.3E-06 42.0 8.5 76 53-128 2-95 (319)
212 PLN02324 triacylglycerol lipas 94.0 0.083 1.8E-06 47.1 4.5 36 79-114 198-235 (415)
213 PLN02802 triacylglycerol lipas 93.9 0.089 1.9E-06 47.9 4.6 36 79-114 313-350 (509)
214 KOG2237 Predicted serine prote 93.8 0.049 1.1E-06 50.6 2.9 98 27-124 472-579 (712)
215 PLN03037 lipase class 3 family 93.6 0.18 3.9E-06 46.1 6.1 37 78-114 298-338 (525)
216 PLN02753 triacylglycerol lipas 93.5 0.11 2.3E-06 47.6 4.5 37 78-114 291-332 (531)
217 COG1770 PtrB Protease II [Amin 93.1 0.24 5.1E-06 46.4 6.1 103 27-130 450-562 (682)
218 PLN02719 triacylglycerol lipas 93.0 0.14 3.1E-06 46.7 4.4 36 79-114 278-318 (518)
219 COG4947 Uncharacterized protei 92.7 0.22 4.8E-06 39.0 4.5 113 14-131 15-138 (227)
220 PLN02761 lipase class 3 family 92.7 0.17 3.6E-06 46.4 4.5 37 78-114 272-314 (527)
221 KOG2029 Uncharacterized conser 92.0 0.77 1.7E-05 42.7 7.7 51 79-129 505-572 (697)
222 KOG4569 Predicted lipase [Lipi 91.3 0.3 6.5E-06 42.7 4.4 37 78-114 155-191 (336)
223 PLN02847 triacylglycerol lipas 91.2 0.37 8E-06 44.9 4.9 23 92-114 249-271 (633)
224 PF09949 DUF2183: Uncharacteri 90.9 4.4 9.6E-05 28.8 9.4 84 40-124 12-97 (100)
225 KOG1283 Serine carboxypeptidas 90.6 1 2.2E-05 38.8 6.7 92 23-116 29-144 (414)
226 PF08237 PE-PPE: PE-PPE domain 90.5 2.3 5E-05 34.9 8.7 80 52-131 2-91 (225)
227 PF05705 DUF829: Eukaryotic pr 90.5 2.9 6.2E-05 34.4 9.4 99 27-130 1-113 (240)
228 KOG1202 Animal-type fatty acid 90.3 1.4 3E-05 44.5 8.0 93 25-128 2123-2218(2376)
229 KOG2385 Uncharacterized conser 85.0 3 6.4E-05 38.3 6.4 41 91-131 444-489 (633)
230 PF07519 Tannase: Tannase and 84.1 2.4 5.1E-05 39.0 5.7 83 44-129 52-150 (474)
231 COG4553 DepA Poly-beta-hydroxy 83.5 14 0.00029 31.8 9.3 102 26-131 104-211 (415)
232 cd01714 ETF_beta The electron 80.5 12 0.00026 30.1 8.0 68 48-125 72-145 (202)
233 KOG4388 Hormone-sensitive lipa 77.5 8.1 0.00018 36.2 6.5 97 27-128 398-507 (880)
234 KOG1551 Uncharacterized conser 76.5 3.9 8.5E-05 34.5 3.9 98 28-127 116-228 (371)
235 TIGR03712 acc_sec_asp2 accesso 74.6 36 0.00077 31.3 9.7 94 16-115 279-378 (511)
236 KOG4540 Putative lipase essent 72.8 6 0.00013 33.7 4.2 25 92-116 274-298 (425)
237 COG5153 CVT17 Putative lipase 72.8 6 0.00013 33.7 4.2 25 92-116 274-298 (425)
238 COG3727 Vsr DNA G:T-mismatch r 72.6 14 0.00031 27.6 5.6 15 44-58 100-114 (150)
239 PF09994 DUF2235: Uncharacteri 69.4 52 0.0011 27.8 9.3 88 27-114 3-112 (277)
240 PF06792 UPF0261: Uncharacteri 68.0 70 0.0015 28.8 10.0 98 27-124 3-125 (403)
241 PRK12467 peptide synthase; Pro 66.3 51 0.0011 38.6 10.9 97 25-126 3692-3792(3956)
242 smart00827 PKS_AT Acyl transfe 65.9 6.8 0.00015 33.2 3.3 29 84-112 72-100 (298)
243 COG0529 CysC Adenylylsulfate k 65.6 10 0.00023 30.1 3.9 33 27-59 24-58 (197)
244 PF00698 Acyl_transf_1: Acyl t 65.6 4.1 8.8E-05 35.1 1.9 29 84-112 74-102 (318)
245 COG1073 Hydrolases of the alph 64.1 18 0.00039 29.7 5.5 90 25-116 49-154 (299)
246 PF03610 EIIA-man: PTS system 63.1 53 0.0012 23.5 7.4 75 27-114 2-77 (116)
247 TIGR03131 malonate_mdcH malona 62.2 8.3 0.00018 32.7 3.2 29 84-112 66-94 (295)
248 TIGR02764 spore_ybaN_pdaB poly 60.3 6.4 0.00014 31.1 2.0 33 27-59 153-188 (191)
249 TIGR00128 fabD malonyl CoA-acy 58.2 10 0.00022 31.9 3.0 28 85-112 73-101 (290)
250 COG1752 RssA Predicted esteras 56.7 12 0.00027 32.0 3.3 34 83-116 28-61 (306)
251 cd07198 Patatin Patatin-like p 53.5 17 0.00038 28.1 3.4 33 84-116 16-48 (172)
252 cd07225 Pat_PNPLA6_PNPLA7 Pata 53.3 17 0.00037 31.3 3.6 33 83-115 32-64 (306)
253 COG2830 Uncharacterized protei 53.3 27 0.00059 27.3 4.2 79 26-130 12-91 (214)
254 PF06309 Torsin: Torsin; Inte 52.8 21 0.00046 26.5 3.5 30 23-52 50-81 (127)
255 TIGR00521 coaBC_dfp phosphopan 52.2 1.2E+02 0.0026 27.2 8.8 72 27-101 114-193 (390)
256 PRK10279 hypothetical protein; 52.1 17 0.00036 31.3 3.3 34 83-116 22-55 (300)
257 TIGR02884 spore_pdaA delta-lac 51.4 15 0.00033 30.0 2.9 33 27-59 188-221 (224)
258 TIGR02873 spore_ylxY probable 49.3 17 0.00038 30.6 3.0 33 27-59 232-264 (268)
259 cd07207 Pat_ExoU_VipD_like Exo 48.8 22 0.00048 27.9 3.4 33 84-116 17-49 (194)
260 cd07227 Pat_Fungal_NTE1 Fungal 48.4 23 0.0005 30.0 3.5 32 83-114 27-58 (269)
261 cd07210 Pat_hypo_W_succinogene 48.2 25 0.00054 28.7 3.7 33 84-116 18-50 (221)
262 PF03490 Varsurf_PPLC: Variant 48.0 21 0.00045 21.8 2.3 32 74-105 5-37 (51)
263 PRK02399 hypothetical protein; 46.8 2.2E+02 0.0048 25.7 11.3 96 29-124 6-127 (406)
264 cd00006 PTS_IIA_man PTS_IIA, P 46.5 1.1E+02 0.0024 22.1 7.4 69 27-109 3-73 (122)
265 COG3933 Transcriptional antite 45.0 1.5E+02 0.0032 27.2 8.1 71 27-110 111-181 (470)
266 PF10142 PhoPQ_related: PhoPQ- 44.8 44 0.00095 29.7 4.8 44 84-128 159-205 (367)
267 TIGR02816 pfaB_fam PfaB family 44.6 21 0.00046 33.4 3.0 31 85-115 255-286 (538)
268 COG3946 VirJ Type IV secretory 43.5 1E+02 0.0023 27.8 6.8 101 27-127 50-155 (456)
269 COG3887 Predicted signaling pr 42.2 37 0.0008 32.0 4.1 103 27-132 260-381 (655)
270 cd07209 Pat_hypo_Ecoli_Z1214_l 42.2 31 0.00068 27.8 3.4 33 84-116 16-48 (215)
271 COG0218 Predicted GTPase [Gene 40.8 38 0.00082 27.3 3.5 31 55-89 72-102 (200)
272 cd07228 Pat_NTE_like_bacteria 40.0 36 0.00078 26.4 3.3 34 84-117 18-51 (175)
273 KOG2521 Uncharacterized conser 39.7 2E+02 0.0043 25.5 8.0 104 26-130 39-153 (350)
274 PHA02114 hypothetical protein 38.6 51 0.0011 23.3 3.4 33 27-59 84-116 (127)
275 PF14253 AbiH: Bacteriophage a 38.0 39 0.00085 28.1 3.4 24 86-109 226-250 (270)
276 PF10081 Abhydrolase_9: Alpha/ 38.0 55 0.0012 27.9 4.2 52 80-131 92-149 (289)
277 PF08433 KTI12: Chromatin asso 37.0 70 0.0015 27.0 4.8 72 27-99 2-76 (270)
278 KOG1200 Mitochondrial/plastidi 36.4 1.9E+02 0.0042 23.6 6.8 32 28-61 16-47 (256)
279 COG1448 TyrB Aspartate/tyrosin 36.0 2.2E+02 0.0047 25.5 7.6 84 27-127 173-263 (396)
280 COG3673 Uncharacterized conser 35.6 3.1E+02 0.0068 24.2 8.6 90 25-114 31-142 (423)
281 PRK13982 bifunctional SbtC-lik 35.5 3.6E+02 0.0079 24.9 9.6 100 27-129 182-306 (475)
282 PF03283 PAE: Pectinacetyleste 35.0 1.3E+02 0.0027 26.7 6.2 46 84-129 144-195 (361)
283 cd02653 nuc_hydro_3 NH_3: A su 35.0 1.6E+02 0.0035 25.5 6.8 48 80-131 101-152 (320)
284 PF15566 Imm18: Immunity prote 34.5 49 0.0011 20.5 2.5 33 76-108 3-35 (52)
285 PF00448 SRP54: SRP54-type pro 34.4 2.1E+02 0.0046 22.7 7.0 73 43-125 74-148 (196)
286 PF13207 AAA_17: AAA domain; P 34.2 63 0.0014 22.8 3.7 37 28-66 1-40 (121)
287 TIGR03709 PPK2_rel_1 polyphosp 33.4 48 0.001 28.0 3.2 36 26-61 56-93 (264)
288 cd07205 Pat_PNPLA6_PNPLA7_NTE1 33.4 61 0.0013 25.0 3.7 32 84-115 18-49 (175)
289 PRK05579 bifunctional phosphop 33.2 3.6E+02 0.0078 24.2 10.5 71 27-101 118-196 (399)
290 PLN02717 uridine nucleosidase 33.0 2.1E+02 0.0046 24.7 7.3 49 80-131 104-156 (316)
291 COG4822 CbiK Cobalamin biosynt 33.0 2.5E+02 0.0054 23.1 6.9 58 27-99 140-199 (265)
292 cd07208 Pat_hypo_Ecoli_yjju_li 33.0 59 0.0013 27.1 3.7 34 84-117 16-50 (266)
293 cd03818 GT1_ExpC_like This fam 32.5 93 0.002 27.3 5.1 36 28-66 2-38 (396)
294 PF00326 Peptidase_S9: Prolyl 32.3 87 0.0019 24.7 4.5 59 26-90 145-208 (213)
295 cd01715 ETF_alpha The electron 32.3 2.3E+02 0.005 21.7 6.9 85 27-126 31-118 (168)
296 cd06292 PBP1_LacI_like_10 Liga 32.1 2.7E+02 0.0059 22.5 8.0 75 27-103 58-132 (273)
297 PF12242 Eno-Rase_NADH_b: NAD( 32.0 71 0.0015 21.5 3.1 40 76-115 18-61 (78)
298 COG0541 Ffh Signal recognition 31.9 2.9E+02 0.0063 25.3 7.9 70 46-125 176-247 (451)
299 PF01583 APS_kinase: Adenylyls 31.8 80 0.0017 24.3 4.0 34 26-59 2-37 (156)
300 PF09419 PGP_phosphatase: Mito 31.8 2E+02 0.0043 22.5 6.2 53 48-104 36-88 (168)
301 TIGR03707 PPK2_P_aer polyphosp 31.7 55 0.0012 27.0 3.2 69 25-107 30-102 (230)
302 cd07230 Pat_TGL4-5_like Triacy 31.7 35 0.00077 30.9 2.3 36 84-119 91-126 (421)
303 cd07224 Pat_like Patatin-like 31.4 61 0.0013 26.6 3.5 34 84-117 17-52 (233)
304 COG0159 TrpA Tryptophan syntha 30.9 1.8E+02 0.0039 24.6 6.1 85 24-125 94-179 (265)
305 PF00484 Pro_CA: Carbonic anhy 30.8 72 0.0016 24.0 3.6 34 78-111 39-72 (153)
306 PF05724 TPMT: Thiopurine S-me 30.6 66 0.0014 26.2 3.5 30 27-61 39-68 (218)
307 PF01012 ETF: Electron transfe 29.9 2.5E+02 0.0053 21.3 6.9 72 45-126 51-125 (164)
308 COG1576 Uncharacterized conser 29.0 1.6E+02 0.0036 22.7 5.1 46 52-109 67-113 (155)
309 cd07229 Pat_TGL3_like Triacylg 28.8 57 0.0012 29.3 3.0 39 84-122 101-139 (391)
310 PF11713 Peptidase_C80: Peptid 28.7 31 0.00067 26.6 1.2 47 60-106 61-116 (157)
311 KOG2872 Uroporphyrinogen decar 28.4 2.4E+02 0.0052 24.4 6.4 70 26-102 253-336 (359)
312 cd02651 nuc_hydro_IU_UC_XIUA n 27.9 2.6E+02 0.0055 23.9 6.9 47 80-129 101-151 (302)
313 cd02650 nuc_hydro_CaPnhB NH_hy 27.9 3E+02 0.0064 23.5 7.3 48 81-131 103-154 (304)
314 PF14392 zf-CCHC_4: Zinc knuck 27.8 24 0.00052 21.3 0.3 9 237-245 29-37 (49)
315 PRK06029 3-octaprenyl-4-hydrox 27.7 3.1E+02 0.0067 21.7 7.3 46 42-95 132-178 (185)
316 cd07204 Pat_PNPLA_like Patatin 27.6 85 0.0018 25.9 3.7 33 84-116 17-53 (243)
317 PRK07313 phosphopantothenoylcy 26.9 2.4E+02 0.0053 22.2 6.1 58 27-88 115-178 (182)
318 PRK14581 hmsF outer membrane N 26.7 1.3E+02 0.0028 29.1 5.1 76 26-101 49-142 (672)
319 PRK13256 thiopurine S-methyltr 26.5 82 0.0018 25.9 3.4 29 28-61 46-74 (226)
320 PF03976 PPK2: Polyphosphate k 25.9 30 0.00065 28.5 0.7 36 26-61 31-68 (228)
321 cd07232 Pat_PLPL Patain-like p 25.9 49 0.0011 29.8 2.1 39 84-122 85-123 (407)
322 COG1506 DAP2 Dipeptidyl aminop 25.8 2.6E+02 0.0056 26.7 7.1 41 26-66 552-595 (620)
323 cd06542 GH18_EndoS-like Endo-b 25.6 3.8E+02 0.0081 22.0 7.5 71 27-98 30-110 (255)
324 KOG2170 ATPase of the AAA+ sup 25.2 47 0.001 28.8 1.8 19 23-41 107-125 (344)
325 PRK11613 folP dihydropteroate 25.1 4.3E+02 0.0094 22.5 8.1 58 42-108 166-225 (282)
326 cd02649 nuc_hydro_CeIAG nuc_hy 25.1 3.2E+02 0.0069 23.5 6.9 49 80-131 104-156 (306)
327 PRK06849 hypothetical protein; 25.0 2.5E+02 0.0055 24.7 6.6 72 27-102 6-85 (389)
328 KOG0781 Signal recognition par 24.7 3.1E+02 0.0066 25.6 6.8 87 29-125 442-538 (587)
329 cd07231 Pat_SDP1-like Sugar-De 24.4 69 0.0015 27.9 2.6 32 84-115 86-117 (323)
330 COG3340 PepE Peptidase E [Amin 24.2 4E+02 0.0088 21.9 7.0 35 27-61 34-71 (224)
331 cd07212 Pat_PNPLA9 Patatin-lik 24.1 1.3E+02 0.0028 26.0 4.4 19 97-115 35-53 (312)
332 TIGR01425 SRP54_euk signal rec 23.9 4.7E+02 0.01 23.8 8.0 69 47-125 177-247 (429)
333 cd02907 Macro_Af1521_BAL_like 23.9 3.4E+02 0.0074 20.9 7.0 66 44-112 104-171 (175)
334 COG1703 ArgK Putative periplas 23.7 4.9E+02 0.011 22.6 8.5 86 23-108 48-161 (323)
335 PF04244 DPRP: Deoxyribodipyri 23.5 1.9E+02 0.0041 23.8 5.0 48 41-99 51-98 (224)
336 PF03205 MobB: Molybdopterin g 23.5 1.5E+02 0.0031 22.2 4.0 42 27-68 1-44 (140)
337 cd07218 Pat_iPLA2 Calcium-inde 22.8 1.1E+02 0.0023 25.4 3.5 20 97-116 33-52 (245)
338 cd07206 Pat_TGL3-4-5_SDP1 Tria 22.4 83 0.0018 27.1 2.8 30 87-116 90-119 (298)
339 KOG0736 Peroxisome assembly fa 22.4 4E+02 0.0086 26.6 7.3 90 36-130 748-845 (953)
340 PRK03363 fixB putative electro 22.0 5.3E+02 0.011 22.4 7.7 60 46-115 42-103 (313)
341 PF09664 DUF2399: Protein of u 21.9 1.1E+02 0.0023 23.5 3.0 31 25-57 41-71 (152)
342 cd07221 Pat_PNPLA3 Patatin-lik 21.7 1.2E+02 0.0027 25.2 3.7 22 95-116 33-54 (252)
343 TIGR00632 vsr DNA mismatch end 21.7 1.1E+02 0.0025 22.3 3.0 14 45-58 100-113 (117)
344 PRK14194 bifunctional 5,10-met 21.3 1.5E+02 0.0032 25.7 4.0 34 81-114 143-182 (301)
345 COG4088 Predicted nucleotide k 21.3 1.1E+02 0.0024 25.2 3.0 34 27-60 2-37 (261)
346 COG4850 Uncharacterized conser 21.2 2.6E+02 0.0057 24.5 5.4 97 27-128 215-314 (373)
347 COG1957 URH1 Inosine-uridine n 21.1 4.5E+02 0.0098 22.8 7.0 53 78-133 102-158 (311)
348 cd03379 beta_CA_cladeD Carboni 21.0 1.4E+02 0.0031 22.4 3.5 27 79-105 41-67 (142)
349 cd07220 Pat_PNPLA2 Patatin-lik 20.9 1.3E+02 0.0027 25.2 3.5 22 95-116 37-58 (249)
350 PRK15180 Vi polysaccharide bio 20.8 2.4E+02 0.0052 26.3 5.4 77 27-103 98-198 (831)
351 PRK06696 uridine kinase; Valid 20.7 4.5E+02 0.0097 21.1 7.7 79 25-103 21-112 (223)
352 cd00382 beta_CA Carbonic anhyd 20.4 1.4E+02 0.0031 21.6 3.3 29 80-108 45-73 (119)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-39 Score=273.14 Aligned_cols=224 Identities=40% Similarity=0.788 Sum_probs=188.0
Q ss_pred CCCceeEEEECCEEEEEEecC--CCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHH
Q 025988 2 DKIEHKYIKVQGLNLHVAETG--TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKD 79 (245)
Q Consensus 2 ~~~~~~~~~~~g~~~~~~~~g--~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~ 79 (245)
+.+++++++.+|+++||.+.| +|| .|+++||||.++++|+.+++.|+..||+|+|+|+||||.|+.|+....|++..
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~~~gP-~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGPGDGP-IVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhcceeeEEEccEEEEEEeecCCCCC-EEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 457889999999999999998 445 99999999999999999999999999999999999999999998878999999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCCCch---hHhhhcCCcchhhccCCcchh
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTA---EFHKSLPEGFYISRWQEPGRA 156 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 156 (245)
++.|+..++++|+.++++++|||||+++|+++|..+|++|+++|++++++..|... .......+.+|..++|.|...
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~ 178 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKP 178 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcc
Confidence 99999999999999999999999999999999999999999999999987733222 122356788889999999988
Q ss_pred hhhcccCCHHHHHHHHHHhhcCCCCCCCCcchhhhhcccCCCCCCCCCCHHHHHHHHHHHccCCCCCCCCccccccccCc
Q 025988 157 EADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRYILMFY 236 (245)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~l~~~YR~~~~~~ 236 (245)
+..+...+.+.++...+.. ..+....... .....+.|+++|+++.|...+...|+++++|| ||++..+|
T Consensus 179 E~~~s~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNy-yrn~~r~w 247 (322)
T KOG4178|consen 179 ETELSKDDTEMLVKTFRTR-KTPGPLIVPK---------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNY-YRNFRRNW 247 (322)
T ss_pred hhhhccchhHHhHHhhhcc-ccCCccccCC---------CCCCccchhhHHHHHHHHhccccccccccchh-hHHHhhCc
Confidence 8888877766666553321 1111111111 11122779999999999999998999999999 99999999
Q ss_pred c
Q 025988 237 S 237 (245)
Q Consensus 237 ~ 237 (245)
+
T Consensus 248 ~ 248 (322)
T KOG4178|consen 248 E 248 (322)
T ss_pred h
Confidence 6
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=1.1e-25 Score=192.11 Aligned_cols=124 Identities=26% Similarity=0.442 Sum_probs=113.1
Q ss_pred CceeEEEECCEEEEEEecC-CCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC-----CCCCCH
Q 025988 4 IEHKYIKVQGLNLHVAETG-TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE-----PEKASF 77 (245)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g-~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~-----~~~~~~ 77 (245)
++.++++.+|.+++|...| +++ +|||+||++++...|+.+++.|++. |+|+++|+||||.|+.+.. ...|++
T Consensus 8 ~~~~~~~~~~~~i~y~~~G~~~~-~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 8 VETRTWRWKGYNIRYQRAGTSGP-ALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCceEEEcCeEEEEEEcCCCCC-eEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 5678899999999999988 465 9999999999999999999999876 8999999999999987642 135899
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+++++|+.+++++++.+++++|||||||.+++.+|.++|++|+++|+++++.
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 9999999999999999999999999999999999999999999999999754
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=3e-25 Score=190.22 Aligned_cols=124 Identities=31% Similarity=0.566 Sum_probs=113.0
Q ss_pred CceeEEEECC-----EEEEEEecCC--CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 025988 4 IEHKYIKVQG-----LNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKAS 76 (245)
Q Consensus 4 ~~~~~~~~~g-----~~~~~~~~g~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~ 76 (245)
+..+++++++ .+++|.+.|+ ++ +|||+||++++...|+.+++.|.+.||+|+++|+||||.|+.+.....++
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~-~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~ 97 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGP-PVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYT 97 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCC-EEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCC
Confidence 4567888888 8999999884 55 99999999999999999999998779999999999999998765444689
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
++++++|+.++++++++++++++||||||.+++.+|..+|++|+++|++++.
T Consensus 98 ~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 98 YARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999864
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=3.2e-25 Score=189.24 Aligned_cols=122 Identities=36% Similarity=0.571 Sum_probs=113.1
Q ss_pred CceeEEEECCEEEEEEecCCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025988 4 IEHKYIKVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (245)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~ 83 (245)
++.++++++|.+++|...|+++ +|||+||++++...|+.+++.|.+. ++|+++|+||||.|+.+.. .++.+++++|
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~--~~~~~~~a~d 82 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGD-PIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI--DYTFADHARY 82 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCC-EEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC--CCCHHHHHHH
Confidence 4566788899999999999887 9999999999999999999999887 6999999999999998753 5899999999
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.+++++++++++++|||||||.+++.++.++|++|+++|+++++.
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999999999999999999999743
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.92 E-value=8.5e-25 Score=185.02 Aligned_cols=122 Identities=21% Similarity=0.220 Sum_probs=109.7
Q ss_pred eeEEEECCEEEEEEec--CCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025988 6 HKYIKVQGLNLHVAET--GTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (245)
Q Consensus 6 ~~~~~~~g~~~~~~~~--g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~ 83 (245)
.++++++|.+++|... ++++++|||+||++++...|+.+++.|.+ +|+|+++|+||||.|+.+. ..++++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~~ 80 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR--HPYRFPGLAKL 80 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC--CcCcHHHHHHH
Confidence 4678889999999764 34545999999999999999999999976 5999999999999998764 36899999999
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+.++++++++++++||||||||.+++.+|.++|++|+++|+++++..
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 99999999999999999999999999999999999999999998753
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.92 E-value=8.1e-24 Score=180.24 Aligned_cols=124 Identities=28% Similarity=0.534 Sum_probs=112.8
Q ss_pred CceeEEEECCEEEEEEecCCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025988 4 IEHKYIKVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (245)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~ 83 (245)
++.++++++|.+++|...|+++ +|||+||++.+...|+.+++.|.+ +|+|+++|+||||.|+.+.+ ..++.++++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~~-~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 90 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTGP-PILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FGYQIDEHARV 90 (286)
T ss_pred ccceEEEcCCcEEEEEECCCCC-EEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cccCHHHHHHH
Confidence 5667888999999999999887 999999999999999999999975 59999999999999987753 35889999999
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+.+++++++.++++++||||||.+++.++..+|++|+++|+++++..
T Consensus 91 ~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 137 (286)
T PRK03204 91 IGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW 137 (286)
T ss_pred HHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc
Confidence 99999999999999999999999999999999999999999887653
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=1.2e-23 Score=184.74 Aligned_cols=120 Identities=23% Similarity=0.351 Sum_probs=107.8
Q ss_pred eEEEECCE-EEEEEecCCC------CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHH
Q 025988 7 KYIKVQGL-NLHVAETGTG------PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKD 79 (245)
Q Consensus 7 ~~~~~~g~-~~~~~~~g~~------~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~ 79 (245)
++++.+|. +++|.+.|++ + +|||+||++++...|+++++.|.+ +|+|+++|+||||.|+.+.+ ..|++++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp-~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~ 140 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGP-PVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMET 140 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCC-eEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHH
Confidence 45667776 9999998865 5 999999999999999999999976 69999999999999988753 3689999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh-CCcceeEEEEeCCCC
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPERVSGVITLGVPF 129 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lv~~~~~~ 129 (245)
+++++.++++++++++++||||||||.+++.+++. +|++|+++|+++++.
T Consensus 141 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 141 WAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 99999999999999999999999999999998874 799999999999764
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.90 E-value=9.6e-23 Score=172.31 Aligned_cols=124 Identities=28% Similarity=0.453 Sum_probs=102.5
Q ss_pred CceeEEEEC-----CEEEEEEecCCCCceEEEEcCCCCCccchHH---HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCC
Q 025988 4 IEHKYIKVQ-----GLNLHVAETGTGPNVVVFLHGFPEIWYSWRH---QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKA 75 (245)
Q Consensus 4 ~~~~~~~~~-----g~~~~~~~~g~~~~~vl~lHG~~~~~~~~~~---~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~ 75 (245)
...+++.++ +.+++|...|+++ +|||+||++.+...|.. .+..+.+.||+|+++|+||||.|+.+......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~g~~~-~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 83 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEAGNGE-AVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQR 83 (282)
T ss_pred CcceEEEcccccccceeEEEEecCCCC-eEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccc
Confidence 445566553 5779999988877 89999999988888864 35566667899999999999999876321122
Q ss_pred CHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 76 ~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
.. .+++++.++++.++.++++++||||||.+++.++.++|++++++|+++++.
T Consensus 84 ~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 84 GL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred cc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 22 578999999999999999999999999999999999999999999998753
No 9
>PLN02965 Probable pheophorbidase
Probab=99.89 E-value=9.8e-23 Score=170.53 Aligned_cols=102 Identities=25% Similarity=0.345 Sum_probs=93.9
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEEEccCH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLVAKDFGA 105 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~-~~~~lvGhS~Gg 105 (245)
+|||+||++.+...|+.+++.|.+.+|+|+++|+||||.|+.+.. ..++++++++|+.++++.++. +++++|||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 699999999999999999999977789999999999999986543 357899999999999999987 499999999999
Q ss_pred HHHHHHHHhCCcceeEEEEeCCCC
Q 025988 106 RPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 106 ~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
.++..++.++|++|+++|++++..
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~ 107 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAM 107 (255)
T ss_pred HHHHHHHHhCchheeEEEEEcccc
Confidence 999999999999999999998764
No 10
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.89 E-value=2.5e-22 Score=168.70 Aligned_cols=123 Identities=27% Similarity=0.432 Sum_probs=111.2
Q ss_pred ceeEEEECCEEEEEEecCC--CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 025988 5 EHKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITN 82 (245)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~ 82 (245)
..+++++++.+++|.+.|+ ++ +|||+||++++...|+.+++.|.+ +|+|+++|+||||.|+.+.. ..++++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~-~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 83 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGP-LLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAE 83 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCC-eEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHH
Confidence 4567889999999999884 45 999999999999999999999976 59999999999999987653 3689999999
Q ss_pred HHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 83 DLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 83 ~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
|+.++++++++++++++||||||.+++.++..+|++++++|++++...
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALM 131 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccc
Confidence 999999999999999999999999999999999999999999987643
No 11
>PLN02578 hydrolase
Probab=99.89 E-value=2e-22 Score=176.62 Aligned_cols=119 Identities=24% Similarity=0.353 Sum_probs=109.1
Q ss_pred eEEEECCEEEEEEecCCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 025988 7 KYIKVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLA 86 (245)
Q Consensus 7 ~~~~~~g~~~~~~~~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~ 86 (245)
++++.+|.+++|...|+|+ +|||+||++++...|+.+++.|.+ +|+|+++|+||||.|+++. ..|+.+.+++++.+
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~-~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~ 144 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGL-PIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL--IEYDAMVWRDQVAD 144 (354)
T ss_pred eEEEECCEEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc--cccCHHHHHHHHHH
Confidence 4566789999999999887 899999999999999999999976 5999999999999999874 36899999999999
Q ss_pred HHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 87 TLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 87 ~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+++.++.++++++||||||.+++.+|.++|++|+++|+++++.
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG 187 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCc
Confidence 9999999999999999999999999999999999999998653
No 12
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.89 E-value=1.8e-22 Score=177.91 Aligned_cols=123 Identities=27% Similarity=0.491 Sum_probs=110.5
Q ss_pred eEEEECCEEEEEEecCCC-CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC--CCCCHHHHHHH
Q 025988 7 KYIKVQGLNLHVAETGTG-PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP--EKASFKDITND 83 (245)
Q Consensus 7 ~~~~~~g~~~~~~~~g~~-~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~--~~~~~~~~~~~ 83 (245)
..++.++.+++|.+.|++ .++|||+||++++...|+.+++.|.+ +|+|+++|+||||.|+.+... ..|++++++++
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 345678999999998842 34999999999999999999999976 699999999999999987532 35899999999
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+.++++++++++++|||||+||.+++.++..+|++|+++|+++++..
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 99999999999999999999999999999999999999999998753
No 13
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.89 E-value=3e-22 Score=180.23 Aligned_cols=126 Identities=21% Similarity=0.374 Sum_probs=108.9
Q ss_pred CceeEEEECCEEEEEEecCCC----CceEEEEcCCCCCccchHH-HHHHHHH---CCcEEEEeCCCCCCCCCCCCCCCCC
Q 025988 4 IEHKYIKVQGLNLHVAETGTG----PNVVVFLHGFPEIWYSWRH-QMVAVAA---AGFRAIAPDYRGYGLSDPPAEPEKA 75 (245)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~~----~~~vl~lHG~~~~~~~~~~-~~~~l~~---~g~~via~d~~G~G~s~~~~~~~~~ 75 (245)
+.+.++++++.+++|...|+. .++|||+||++++...|.. +++.|.+ .+|+|+++|+||||.|+.+.+ ..|
T Consensus 176 ~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~y 254 (481)
T PLN03087 176 FCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SLY 254 (481)
T ss_pred eeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-CcC
Confidence 445678888999999987732 2499999999999999985 4566653 589999999999999988743 458
Q ss_pred CHHHHHHHHH-HHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 76 SFKDITNDLL-ATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 76 ~~~~~~~~i~-~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+++++++++. .+++++++++++++||||||.+++.+|.++|++|+++|+++++..
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 9999999995 899999999999999999999999999999999999999997654
No 14
>PRK06489 hypothetical protein; Provisional
Probab=99.88 E-value=3.2e-22 Score=175.70 Aligned_cols=118 Identities=20% Similarity=0.350 Sum_probs=99.6
Q ss_pred EECCEEEEEEecCC---------CCceEEEEcCCCCCccchH--HHHHHH-------HHCCcEEEEeCCCCCCCCCCCCC
Q 025988 10 KVQGLNLHVAETGT---------GPNVVVFLHGFPEIWYSWR--HQMVAV-------AAAGFRAIAPDYRGYGLSDPPAE 71 (245)
Q Consensus 10 ~~~g~~~~~~~~g~---------~~~~vl~lHG~~~~~~~~~--~~~~~l-------~~~g~~via~d~~G~G~s~~~~~ 71 (245)
+++|.+++|...|+ ++ +|||+||++++...|. .+.+.| ..++|+||++|+||||.|+.+.+
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gp-plvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~ 124 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDN-AVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD 124 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCC-eEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc
Confidence 35789999999986 45 9999999999988886 454444 13479999999999999987653
Q ss_pred C-----CCCCHHHHHHHHHHHH-HHhCCCcEE-EEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 72 P-----EKASFKDITNDLLATL-DHLGINKVF-LVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 72 ~-----~~~~~~~~~~~i~~~l-~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
. ..|+++++++++.+++ +++++++++ ++||||||.+|+.+|.++|++|+++|++++.
T Consensus 125 ~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 125 GLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 2 2489999999988855 889999985 8999999999999999999999999999875
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.87 E-value=4.1e-22 Score=166.53 Aligned_cols=105 Identities=26% Similarity=0.362 Sum_probs=92.7
Q ss_pred EEEEecCCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 025988 16 LHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINK 95 (245)
Q Consensus 16 ~~~~~~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~ 95 (245)
++|...|+|+|+|||+||++++...|+.+++.|.+ .|+|+++|+||||.|+.+. .++++++++++.+ +++++
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~~----~~~~~ 75 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG---ALSLADMAEAVLQ----QAPDK 75 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC---CCCHHHHHHHHHh----cCCCC
Confidence 67888888875799999999999999999999986 4999999999999998643 4788887777653 56789
Q ss_pred EEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 96 VFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 96 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
+++|||||||.+++.+|.++|++|+++|+++++
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 999999999999999999999999999999874
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=99.87 E-value=1.9e-21 Score=168.84 Aligned_cols=124 Identities=20% Similarity=0.269 Sum_probs=106.5
Q ss_pred eeEEEECCEEEEEEecCC--CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC----CCCCHHH
Q 025988 6 HKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP----EKASFKD 79 (245)
Q Consensus 6 ~~~~~~~g~~~~~~~~g~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~----~~~~~~~ 79 (245)
..++..+|.+++|...+. ..++|||+||++++...|..++..+.+.||+|+++|+||||.|+.+... ..+++++
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 112 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFND 112 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHH
Confidence 344566899999998762 3348999999999998999999889889999999999999999865321 1258999
Q ss_pred HHHHHHHHHHHh----CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 80 ITNDLLATLDHL----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 80 ~~~~i~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+++|+.++++.+ +..+++++||||||.+++.++..+|++++++|++++..
T Consensus 113 ~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 113 YVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 999999999887 67899999999999999999999999999999998764
No 17
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.87 E-value=2.9e-21 Score=163.56 Aligned_cols=118 Identities=17% Similarity=0.319 Sum_probs=102.6
Q ss_pred ECCEEEEEEecCCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025988 11 VQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH 90 (245)
Q Consensus 11 ~~g~~~~~~~~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 90 (245)
-||-+++|.+.++..|+|||+||++.+...|..++..|.+.||+|+++|+||||.|..+.. ..++++++++++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHHh
Confidence 4778888887643334999999999999999999999988899999999999998754332 247999999999999999
Q ss_pred hC-CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 91 LG-INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 91 l~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++ .+++++|||||||.++..++..+|++|+++|++++..
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecccc
Confidence 85 5899999999999999999999999999999997654
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.86 E-value=2.5e-21 Score=161.19 Aligned_cols=99 Identities=22% Similarity=0.394 Sum_probs=92.3
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCH
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg 105 (245)
|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .++++++++|+.++++.++.++++++||||||
T Consensus 17 ~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg 92 (255)
T PRK10673 17 SPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHSMGG 92 (255)
T ss_pred CCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEECHHH
Confidence 4999999999999999999999976 6999999999999998653 47999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcceeEEEEeCCC
Q 025988 106 RPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 106 ~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
.+++.+|.++|++|+++|+++++
T Consensus 93 ~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 93 KAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred HHHHHHHHhCHhhcceEEEEecC
Confidence 99999999999999999999754
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.86 E-value=2.1e-21 Score=160.49 Aligned_cols=99 Identities=26% Similarity=0.319 Sum_probs=90.2
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCH
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg 105 (245)
|+|||+||++++...|+++++.| + +|+|+++|+||||.|+.+.. .+++++++|+.++++++++++++++||||||
T Consensus 3 p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg 77 (242)
T PRK11126 3 PWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV---DGFADVSRLLSQTLQSYNILPYWLVGYSLGG 77 (242)
T ss_pred CEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc---cCHHHHHHHHHHHHHHcCCCCeEEEEECHHH
Confidence 38999999999999999999988 3 69999999999999987643 4899999999999999999999999999999
Q ss_pred HHHHHHHHhCCc-ceeEEEEeCCCC
Q 025988 106 RPAYLFALLHPE-RVSGVITLGVPF 129 (245)
Q Consensus 106 ~~a~~~a~~~p~-~v~~lv~~~~~~ 129 (245)
.+++.+|.++|+ +|+++|+++++.
T Consensus 78 ~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 78 RIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHhCCcccccEEEEeCCCC
Confidence 999999999976 499999987654
No 20
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.86 E-value=4.3e-21 Score=164.95 Aligned_cols=125 Identities=28% Similarity=0.402 Sum_probs=104.8
Q ss_pred CceeEEEE-CCEEEEEEecCC--CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 025988 4 IEHKYIKV-QGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDI 80 (245)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~g~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~ 80 (245)
....+++. +|.+++|...|+ ++ +|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.....++.+++
T Consensus 4 ~~~~~~~~~~~~~l~y~~~g~~~~~-~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQSGNPDGK-PVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred ccCCeEEcCCCcEEEEEECcCCCCC-EEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 45566777 789999999884 55 899999998876654 34445544679999999999999986643345788999
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 81 TNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 81 ~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
++|+..+++++++++++++||||||.+++.++.++|++|+++|++++...
T Consensus 82 ~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 82 VADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 99999999999999999999999999999999999999999999987654
No 21
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.86 E-value=5.4e-21 Score=167.24 Aligned_cols=120 Identities=23% Similarity=0.380 Sum_probs=101.5
Q ss_pred EEECCEEEEEEecCC----CCceEEEEcCCCCCccc-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025988 9 IKVQGLNLHVAETGT----GPNVVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (245)
Q Consensus 9 ~~~~g~~~~~~~~g~----~~~~vl~lHG~~~~~~~-~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~ 83 (245)
++.+|.+++|..+++ ..++|||+||++++... |+.+++.|.+.||+|+++|+||||.|+.+.. ...+++++++|
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~d 145 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLVDD 145 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHHHH
Confidence 344889999887652 23489999999988654 6889999998899999999999999987643 23589999999
Q ss_pred HHHHHHHhCCC------cEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 84 LLATLDHLGIN------KVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 84 i~~~l~~l~~~------~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.++++.++.+ +++|+||||||.+++.++.++|++++++|++++..
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccc
Confidence 99999887543 79999999999999999999999999999998754
No 22
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.86 E-value=3.1e-21 Score=155.52 Aligned_cols=102 Identities=43% Similarity=0.612 Sum_probs=94.4
Q ss_pred EEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHH
Q 025988 28 VVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARP 107 (245)
Q Consensus 28 vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~ 107 (245)
|||+||++++...|..+++.|. +||+|+++|+||+|.|+.+.....++++++++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999995 699999999999999998764446899999999999999999999999999999999
Q ss_pred HHHHHHhCCcceeEEEEeCCCCC
Q 025988 108 AYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 108 a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
++.++.++|++|+++|+++++..
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccceeeccccc
Confidence 99999999999999999998864
No 23
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.86 E-value=1.6e-21 Score=170.19 Aligned_cols=118 Identities=27% Similarity=0.352 Sum_probs=98.0
Q ss_pred eEEEECCEEEEEEecCC-CCceEEEEcCCCCCcc------------chHHHHH---HHHHCCcEEEEeCCCCCCCCCCCC
Q 025988 7 KYIKVQGLNLHVAETGT-GPNVVVFLHGFPEIWY------------SWRHQMV---AVAAAGFRAIAPDYRGYGLSDPPA 70 (245)
Q Consensus 7 ~~~~~~g~~~~~~~~g~-~~~~vl~lHG~~~~~~------------~~~~~~~---~l~~~g~~via~d~~G~G~s~~~~ 70 (245)
....++|.+++|...|+ ++ ++|||||+.++.. .|..+++ .|...+|+||++|+||||.|..
T Consensus 39 ~~~~~~~~~l~y~~~G~~~~-p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~-- 115 (343)
T PRK08775 39 RHAGLEDLRLRYELIGPAGA-PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD-- 115 (343)
T ss_pred cCCCCCCceEEEEEeccCCC-CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC--
Confidence 34455889999999995 65 6777777666555 6888886 5643469999999999998842
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCcE-EEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 71 EPEKASFKDITNDLLATLDHLGINKV-FLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 71 ~~~~~~~~~~~~~i~~~l~~l~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
..++.+++++|+.+++++++++++ ++|||||||.+++.+|.++|++|+++|++++..
T Consensus 116 --~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 116 --VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred --CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 247889999999999999999775 799999999999999999999999999998764
No 24
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.85 E-value=1.8e-20 Score=157.12 Aligned_cols=123 Identities=24% Similarity=0.335 Sum_probs=101.4
Q ss_pred EEEECCEEEEEEecC-CC-CceEEEEcCCCCCccc-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCC-CCCHHHHHHH
Q 025988 8 YIKVQGLNLHVAETG-TG-PNVVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPE-KASFKDITND 83 (245)
Q Consensus 8 ~~~~~g~~~~~~~~g-~~-~~~vl~lHG~~~~~~~-~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~-~~~~~~~~~~ 83 (245)
++++++.++.|...+ ++ +++|||+||++++... |..+...+.+.||+|+++|+||+|.|..+.... .+++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 567778888887665 22 3489999998766655 455555565558999999999999998764322 3789999999
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+.+++++++.++++++||||||.+++.++..+|++++++|++++...
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS 132 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc
Confidence 99999999999999999999999999999999999999999887543
No 25
>PRK07581 hypothetical protein; Validated
Probab=99.85 E-value=2.5e-21 Score=168.59 Aligned_cols=120 Identities=19% Similarity=0.308 Sum_probs=93.6
Q ss_pred EECCEEEEEEecCC----CCceEEEEcCCCCCccchHHHH---HHHHHCCcEEEEeCCCCCCCCCCCCCC-CCCCHH---
Q 025988 10 KVQGLNLHVAETGT----GPNVVVFLHGFPEIWYSWRHQM---VAVAAAGFRAIAPDYRGYGLSDPPAEP-EKASFK--- 78 (245)
Q Consensus 10 ~~~g~~~~~~~~g~----~~~~vl~lHG~~~~~~~~~~~~---~~l~~~g~~via~d~~G~G~s~~~~~~-~~~~~~--- 78 (245)
+++|++++|...|+ ++|+||++||++++...|..++ +.|...+|+||++|+||||.|+.+... ..|+++
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 44688899998884 3446777788887777776654 367556799999999999999876431 123433
Q ss_pred --HHHHHHHH----HHHHhCCCc-EEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 79 --DITNDLLA----TLDHLGINK-VFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 79 --~~~~~i~~----~l~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
.+++|+.+ +++++++++ ++||||||||.+|+.+|.++|++|+++|++++..
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 35666655 778899999 5899999999999999999999999999998654
No 26
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.85 E-value=7.3e-21 Score=157.23 Aligned_cols=112 Identities=25% Similarity=0.354 Sum_probs=98.5
Q ss_pred EEEEecC---CCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 025988 16 LHVAETG---TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG 92 (245)
Q Consensus 16 ~~~~~~g---~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~ 92 (245)
++|...| ++.|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+.. ..++++++++++.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhC
Confidence 3555555 2345999999999999999999998875 69999999999999986543 46899999999999999999
Q ss_pred CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 93 INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
.++++++||||||.+++.++..+|++++++|++++..
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWS 115 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCC
Confidence 9999999999999999999999999999999998643
No 27
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=2.3e-20 Score=161.90 Aligned_cols=119 Identities=19% Similarity=0.315 Sum_probs=97.8
Q ss_pred EECCEEEEEEecC---C--CCceEEEEcCCCCCc-cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025988 10 KVQGLNLHVAETG---T--GPNVVVFLHGFPEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (245)
Q Consensus 10 ~~~g~~~~~~~~g---~--~~~~vl~lHG~~~~~-~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~ 83 (245)
..+|.+++|...+ . ..++|||+||++.+. ..|..+...|.++||+|+++|+||||.|+.+.. ...+.+.+++|
T Consensus 39 ~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~D 117 (330)
T PLN02298 39 SPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDLVVED 117 (330)
T ss_pred cCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHHHHHH
Confidence 3499999997643 1 123699999998654 356777788988899999999999999975433 24578899999
Q ss_pred HHHHHHHhCC------CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 84 LLATLDHLGI------NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 84 i~~~l~~l~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.++++.+.. .+++|+||||||.+++.++..+|++|+++|++++..
T Consensus 118 ~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 118 CLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 9999998753 369999999999999999999999999999998764
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.84 E-value=1e-20 Score=155.07 Aligned_cols=111 Identities=32% Similarity=0.524 Sum_probs=98.9
Q ss_pred EEEEecCC--CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 025988 16 LHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI 93 (245)
Q Consensus 16 ~~~~~~g~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~ 93 (245)
++|...|+ +.|+|||+||++.+...|+.+++.|. .||+|+++|+||||.|+.+. ..++++++++++.++++.++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 56766663 45589999999999999999999886 47999999999999997654 367999999999999999999
Q ss_pred CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 94 NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++++++||||||.+++.+|..+|++++++|+++++.
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 999999999999999999999999999999998654
No 29
>PHA02857 monoglyceride lipase; Provisional
Probab=99.84 E-value=5.1e-20 Score=155.55 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=99.0
Q ss_pred EEEECCEEEEEEecCC--C-CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 025988 8 YIKVQGLNLHVAETGT--G-PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDL 84 (245)
Q Consensus 8 ~~~~~g~~~~~~~~g~--~-~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i 84 (245)
++..||.+++|....+ . ++.|+++||++++...|+.+++.|.+.||+|+++|+||||.|+... ....++..+.+|+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHHH
Confidence 4555899999875442 2 3356666999999999999999999889999999999999997542 2234666777777
Q ss_pred HHHHHHh----CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 85 LATLDHL----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 85 ~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.+.++.+ ..++++++||||||.+++.+|.++|++++++|++++...
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 7777654 346899999999999999999999999999999987643
No 30
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.84 E-value=1.6e-20 Score=164.42 Aligned_cols=121 Identities=22% Similarity=0.342 Sum_probs=99.5
Q ss_pred EECCEEEEEEecCC----CCceEEEEcCCCCCcc-----------chHHHHH---HHHHCCcEEEEeCCCC--CCCCCCC
Q 025988 10 KVQGLNLHVAETGT----GPNVVVFLHGFPEIWY-----------SWRHQMV---AVAAAGFRAIAPDYRG--YGLSDPP 69 (245)
Q Consensus 10 ~~~g~~~~~~~~g~----~~~~vl~lHG~~~~~~-----------~~~~~~~---~l~~~g~~via~d~~G--~G~s~~~ 69 (245)
+++|.+++|...|+ +.++|||+||++++.+ .|+.++. .|...+|+||++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 45789999999883 2348999999999764 3777762 5545689999999999 5555421
Q ss_pred ----CC------CCCCCHHHHHHHHHHHHHHhCCCc-EEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 70 ----AE------PEKASFKDITNDLLATLDHLGINK-VFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 70 ----~~------~~~~~~~~~~~~i~~~l~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.. ...++++++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|++++...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSAR 163 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCc
Confidence 11 125889999999999999999999 99999999999999999999999999999998654
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.83 E-value=8.3e-20 Score=149.29 Aligned_cols=104 Identities=38% Similarity=0.577 Sum_probs=95.1
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCCcEEEEEEccC
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND-LLATLDHLGINKVFLVAKDFG 104 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~-i~~~l~~l~~~~~~lvGhS~G 104 (245)
|+|||+||++++...|+.+++.|. .||+|+++|+||+|.|+.+.....+++++++++ +..+++.++.++++++|||+|
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 80 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMG 80 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccH
Confidence 489999999999999999999998 689999999999999988765556889999999 888889999999999999999
Q ss_pred HHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 105 ARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 105 g~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
|.+++.+|.++|++|+++|++++...
T Consensus 81 g~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 81 GRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred HHHHHHHHHhCchheeeeEEecCCCC
Confidence 99999999999999999999987643
No 32
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.82 E-value=5.8e-20 Score=162.49 Aligned_cols=121 Identities=20% Similarity=0.275 Sum_probs=97.9
Q ss_pred EECCEEEEEEecCC----CCceEEEEcCCCCCccc-------------hHHHHH---HHHHCCcEEEEeCCCCC-CCCCC
Q 025988 10 KVQGLNLHVAETGT----GPNVVVFLHGFPEIWYS-------------WRHQMV---AVAAAGFRAIAPDYRGY-GLSDP 68 (245)
Q Consensus 10 ~~~g~~~~~~~~g~----~~~~vl~lHG~~~~~~~-------------~~~~~~---~l~~~g~~via~d~~G~-G~s~~ 68 (245)
+++|.+++|...|+ +.|+|||+||++++... |..++. .|...+|+||++|++|+ |.|+.
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 34677899998884 13499999999999874 667652 34245799999999993 55543
Q ss_pred CCC------------CCCCCHHHHHHHHHHHHHHhCCCc-EEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 69 PAE------------PEKASFKDITNDLLATLDHLGINK-VFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 69 ~~~------------~~~~~~~~~~~~i~~~l~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+.. ...|+++++++++.++++++++++ ++++||||||.+++.+|..+|++|+++|++++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 321 125899999999999999999999 59999999999999999999999999999997653
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.80 E-value=8.7e-19 Score=153.87 Aligned_cols=120 Identities=29% Similarity=0.442 Sum_probs=105.8
Q ss_pred eEEEECCEEEEEEecCCC-CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 025988 7 KYIKVQGLNLHVAETGTG-PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLL 85 (245)
Q Consensus 7 ~~~~~~g~~~~~~~~g~~-~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~ 85 (245)
..+..++.+++|...|++ .++|||+||++++...|..++..|.+ +|+|+++|+||||.|.... ..++++++++++.
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV--GAGSLDELAAAVL 188 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 345667888999887742 34999999999999999999999976 5999999999999996543 2578999999999
Q ss_pred HHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 86 ATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 86 ~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++++.++.++++++|||+||.+++.+|..+|+++.++|+++++.
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 99999999999999999999999999999999999999998764
No 34
>PRK05855 short chain dehydrogenase; Validated
Probab=99.80 E-value=4.1e-19 Score=164.47 Aligned_cols=123 Identities=25% Similarity=0.453 Sum_probs=102.4
Q ss_pred ceeEEEECCEEEEEEecCC-CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025988 5 EHKYIKVQGLNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (245)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~-~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~ 83 (245)
+..++..+|.+++|...|+ +.|+|||+||++++...|+++++.|. .+|+|+++|+||||.|+.+.....++.+++++|
T Consensus 4 ~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 82 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADD 82 (582)
T ss_pred eEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHH
Confidence 3455677999999998884 23499999999999999999999995 579999999999999987655456899999999
Q ss_pred HHHHHHHhCCCc-EEEEEEccCHHHHHHHHHh--CCcceeEEEEeCCC
Q 025988 84 LLATLDHLGINK-VFLVAKDFGARPAYLFALL--HPERVSGVITLGVP 128 (245)
Q Consensus 84 i~~~l~~l~~~~-~~lvGhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~ 128 (245)
+.+++++++.++ ++++||||||.+++.++.. .++++..++.++++
T Consensus 83 l~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 83 FAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred HHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 999999998776 9999999999999988766 24455555555544
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.80 E-value=2.8e-19 Score=146.19 Aligned_cols=100 Identities=23% Similarity=0.269 Sum_probs=86.0
Q ss_pred CCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEE
Q 025988 22 GTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK 101 (245)
Q Consensus 22 g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGh 101 (245)
|+++|+|||+||++++...|+.+++.|.+ +|+|+++|+||+|.|+... .++++++++++.+.+ .++++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~ 72 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGW 72 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEE
Confidence 45645999999999999999999999975 6999999999999987643 467888888776554 378999999
Q ss_pred ccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 102 DFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 102 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
||||.+++.++.++|++++++|++++..
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 9999999999999999999999987653
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.79 E-value=1.6e-18 Score=148.17 Aligned_cols=127 Identities=28% Similarity=0.349 Sum_probs=107.9
Q ss_pred ceeEEEECCEEEEEEecCC--CC-ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCC-CCCCCCCCCHHHH
Q 025988 5 EHKYIKVQGLNLHVAETGT--GP-NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSD-PPAEPEKASFKDI 80 (245)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~--~~-~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~-~~~~~~~~~~~~~ 80 (245)
+..+...+|..++|..... .+ .+||++||+.++...|..++..|..+||.|+++|+||||.|. .... ...++.++
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg-~~~~f~~~ 89 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG-HVDSFADY 89 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC-CchhHHHH
Confidence 3445666999999887652 21 489999999999999999999999999999999999999997 3322 23458999
Q ss_pred HHHHHHHHHHhC----CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCC
Q 025988 81 TNDLLATLDHLG----INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP 132 (245)
Q Consensus 81 ~~~i~~~l~~l~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~ 132 (245)
..|+.++++... ..+++++||||||.|+..++.+++.+|+++|+.+|.+...
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 999999998874 3689999999999999999999999999999999887665
No 37
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.79 E-value=1.1e-18 Score=147.33 Aligned_cols=126 Identities=23% Similarity=0.345 Sum_probs=103.1
Q ss_pred eeEEEE-CCEEEEEEecC---CCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCC--CCCHHH
Q 025988 6 HKYIKV-QGLNLHVAETG---TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPE--KASFKD 79 (245)
Q Consensus 6 ~~~~~~-~g~~~~~~~~g---~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~--~~~~~~ 79 (245)
.+++.+ ++..+...... ....++||+||++.+.-.|-..++.|++ ..+|+++|++|+|.|++|.-.. ....+.
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~ 145 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKE 145 (365)
T ss_pred eeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHH
Confidence 345555 44444443322 3334899999999999999999999997 6999999999999999985322 234557
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCC
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP 132 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~ 132 (245)
+++.|++.....++++.+|||||+||.++..+|.+||++|+.||+++|...+.
T Consensus 146 fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 146 FVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred HHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 89999999999999999999999999999999999999999999999876654
No 38
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.77 E-value=8.2e-18 Score=141.23 Aligned_cols=103 Identities=24% Similarity=0.168 Sum_probs=86.4
Q ss_pred ceEEEEcCCCCCc----cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhCCCcEEE
Q 025988 26 NVVVFLHGFPEIW----YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL---DHLGINKVFL 98 (245)
Q Consensus 26 ~~vl~lHG~~~~~----~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l---~~l~~~~~~l 98 (245)
++|||+||+++.. ..|..+++.|++.||+|+++|+||||.|+.+.. ..+++.+++|+..++ ++.+.+++++
T Consensus 26 ~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~--~~~~~~~~~Dv~~ai~~L~~~~~~~v~L 103 (266)
T TIGR03101 26 GVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA--AARWDVWKEDVAAAYRWLIEQGHPPVTL 103 (266)
T ss_pred eEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc--cCCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4899999998643 357778899998999999999999999976533 457888888877755 4457789999
Q ss_pred EEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 99 VAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 99 vGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+||||||.+++.++.++|++++++|++++...
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999987643
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.77 E-value=3.9e-18 Score=151.83 Aligned_cols=103 Identities=26% Similarity=0.314 Sum_probs=88.3
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHHHHhCCCcEEEEEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKAS----FKDITNDLLATLDHLGINKVFLVAK 101 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~----~~~~~~~i~~~l~~l~~~~~~lvGh 101 (245)
|+|||+||++++...|...++.|.+ +|+|+++|+||||.|+.+... ..+ .+.+++++.++++.+++++++++||
T Consensus 106 p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~-~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGh 183 (402)
T PLN02894 106 PTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFT-CKSTEETEAWFIDSFEEWRKAKNLSNFILLGH 183 (402)
T ss_pred CEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcc-cccHHHHHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 4999999999999999999999986 599999999999999876421 112 2236678888999999999999999
Q ss_pred ccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 102 DFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 102 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
||||.+++.+|.++|++|+++|+++++..
T Consensus 184 S~GG~la~~~a~~~p~~v~~lvl~~p~~~ 212 (402)
T PLN02894 184 SFGGYVAAKYALKHPEHVQHLILVGPAGF 212 (402)
T ss_pred CHHHHHHHHHHHhCchhhcEEEEECCccc
Confidence 99999999999999999999999987644
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.75 E-value=1.7e-17 Score=168.66 Aligned_cols=112 Identities=29% Similarity=0.422 Sum_probs=98.0
Q ss_pred EEEEecCC--CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC------CCCCCHHHHHHHHHHH
Q 025988 16 LHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE------PEKASFKDITNDLLAT 87 (245)
Q Consensus 16 ~~~~~~g~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~------~~~~~~~~~~~~i~~~ 87 (245)
++|.+.|+ ..++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+.. ...++++.+++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 45566664 234999999999999999999999976 59999999999999976431 2357899999999999
Q ss_pred HHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 88 LDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 88 l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
+++++.++++++||||||.+++.++.++|++|+++|++++.
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 99999999999999999999999999999999999999764
No 41
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.74 E-value=2.7e-17 Score=142.17 Aligned_cols=106 Identities=27% Similarity=0.435 Sum_probs=93.0
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~-g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~ 103 (245)
.++||++|||+++...|+.+++.|.+. |++|+++|++|+|.++..+....|+..++++-+..++.+.+.+++++||||+
T Consensus 58 ~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~ 137 (326)
T KOG1454|consen 58 KPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSL 137 (326)
T ss_pred CCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCc
Confidence 349999999999999999999999875 4999999999999544433344699999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCcceeEEE---EeCCCCC
Q 025988 104 GARPAYLFALLHPERVSGVI---TLGVPFI 130 (245)
Q Consensus 104 Gg~~a~~~a~~~p~~v~~lv---~~~~~~~ 130 (245)
||.+|..+|+.+|+.|+++| +++++..
T Consensus 138 Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~ 167 (326)
T KOG1454|consen 138 GGIVALKAAAYYPETVDSLVLLDLLGPPVY 167 (326)
T ss_pred HHHHHHHHHHhCcccccceeeecccccccc
Confidence 99999999999999999999 5555543
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.73 E-value=3.5e-17 Score=145.09 Aligned_cols=116 Identities=20% Similarity=0.248 Sum_probs=95.2
Q ss_pred CCEEEEEEecC----CCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025988 12 QGLNLHVAETG----TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT 87 (245)
Q Consensus 12 ~g~~~~~~~~g----~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~ 87 (245)
++..+++..+. +..++|||+||++++...|..+++.|.++||+|+++|+||||.|+.... ...+.+.+++|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHH
Confidence 55667766543 2334899999999999899999999998999999999999999987533 245788899999999
Q ss_pred HHHhCC----CcEEEEEEccCHHHHHHHHHhCCc---ceeEEEEeCCCC
Q 025988 88 LDHLGI----NKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGVPF 129 (245)
Q Consensus 88 l~~l~~----~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~~ 129 (245)
++.+.. .+++++||||||.+++.++. +|+ +++++|+.++..
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 988743 37999999999999997664 564 899999988764
No 43
>PLN02511 hydrolase
Probab=99.70 E-value=1.7e-16 Score=140.83 Aligned_cols=122 Identities=20% Similarity=0.296 Sum_probs=91.5
Q ss_pred eEEEE-CCEEEEE--Ee-----cCCCCceEEEEcCCCCCccc-h-HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 025988 7 KYIKV-QGLNLHV--AE-----TGTGPNVVVFLHGFPEIWYS-W-RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKAS 76 (245)
Q Consensus 7 ~~~~~-~g~~~~~--~~-----~g~~~~~vl~lHG~~~~~~~-~-~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~ 76 (245)
..+.+ ||..+.+ .. ...+.|+||++||+.++... | +.++..+.+.||+|+++|+||||.|..... ...
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~--~~~ 151 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP--QFY 151 (388)
T ss_pred EEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc--CEE
Confidence 44555 7766654 21 11234589999999876544 4 567777777899999999999999976432 222
Q ss_pred HHHHHHHHHHHHHHhCC----CcEEEEEEccCHHHHHHHHHhCCcc--eeEEEEeCCCCC
Q 025988 77 FKDITNDLLATLDHLGI----NKVFLVAKDFGARPAYLFALLHPER--VSGVITLGVPFI 130 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~~----~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lv~~~~~~~ 130 (245)
...+++|+.+++++++. .++++|||||||.+++.++.++|++ |.+++++++|..
T Consensus 152 ~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 152 SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 34567788888888754 5899999999999999999999987 889998887753
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.69 E-value=2.2e-16 Score=125.55 Aligned_cols=101 Identities=23% Similarity=0.298 Sum_probs=90.7
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEEEcc
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL---GINKVFLVAKDF 103 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l---~~~~~~lvGhS~ 103 (245)
.|||||||.++....+.+.+.|.++||+|.||.+||||.... +.-..+.++|-+|+.+..+.| +.+.|.++|-||
T Consensus 17 AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e--~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSm 94 (243)
T COG1647 17 AVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPE--DFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSM 94 (243)
T ss_pred EEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHH--HHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecc
Confidence 999999999999999999999999999999999999998642 344678899988888777666 788999999999
Q ss_pred CHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 104 GARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 104 Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
||.+++.+|..+| ++++|.+++|...
T Consensus 95 GGv~alkla~~~p--~K~iv~m~a~~~~ 120 (243)
T COG1647 95 GGVFALKLAYHYP--PKKIVPMCAPVNV 120 (243)
T ss_pred hhHHHHHHHhhCC--ccceeeecCCccc
Confidence 9999999999999 8999999998754
No 45
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.69 E-value=2.2e-16 Score=129.48 Aligned_cols=119 Identities=24% Similarity=0.347 Sum_probs=94.6
Q ss_pred eEEEECCE--EEEEEecC----CCCceEEEEcCCCCCccchHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCCCCHHH
Q 025988 7 KYIKVQGL--NLHVAETG----TGPNVVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKD 79 (245)
Q Consensus 7 ~~~~~~g~--~~~~~~~g----~~~~~vl~lHG~~~~~~~~~~~~~~l~~~-g~~via~d~~G~G~s~~~~~~~~~~~~~ 79 (245)
..+.+++. ++..+..+ +|+ .++++||.+.|+.+|..++..+..+ ..+|+|+|+||||.|...++ .+.+.+.
T Consensus 51 edv~i~~~~~t~n~Y~t~~~~t~gp-il~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT 128 (343)
T KOG2564|consen 51 EDVSIDGSDLTFNVYLTLPSATEGP-ILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLET 128 (343)
T ss_pred cccccCCCcceEEEEEecCCCCCcc-EEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHH
Confidence 34555443 34433333 456 9999999999999999999888654 57889999999999976543 4689999
Q ss_pred HHHHHHHHHHHh---CCCcEEEEEEccCHHHHHHHHHh--CCcceeEEEEeCCC
Q 025988 80 ITNDLLATLDHL---GINKVFLVAKDFGARPAYLFALL--HPERVSGVITLGVP 128 (245)
Q Consensus 80 ~~~~i~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~ 128 (245)
+++|+.++++++ ...+++||||||||.||...|.. -|. +.+++.++..
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999987 35689999999999999887765 466 8999998865
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.67 E-value=7.2e-16 Score=134.05 Aligned_cols=119 Identities=18% Similarity=0.284 Sum_probs=92.4
Q ss_pred ECCEEEEEEecCC--CCceEEEEcCCCCCccc-h-------------------------HHHHHHHHHCCcEEEEeCCCC
Q 025988 11 VQGLNLHVAETGT--GPNVVVFLHGFPEIWYS-W-------------------------RHQMVAVAAAGFRAIAPDYRG 62 (245)
Q Consensus 11 ~~g~~~~~~~~g~--~~~~vl~lHG~~~~~~~-~-------------------------~~~~~~l~~~g~~via~d~~G 62 (245)
.+|.++++..+.. ...+|+++||++++... + ..+++.|.++||+|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 4788888876542 22389999999988751 1 357899999999999999999
Q ss_pred CCCCCCCCCCC--CCCHHHHHHHHHHHHHHhC------------------------CCcEEEEEEccCHHHHHHHHHhCC
Q 025988 63 YGLSDPPAEPE--KASFKDITNDLLATLDHLG------------------------INKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 63 ~G~s~~~~~~~--~~~~~~~~~~i~~~l~~l~------------------------~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
||.|+...... ..+++++++|+.++++... ..+++++||||||.++..++..++
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 99998542211 1478999999999998642 247999999999999999887654
Q ss_pred c--------ceeEEEEeCCCC
Q 025988 117 E--------RVSGVITLGVPF 129 (245)
Q Consensus 117 ~--------~v~~lv~~~~~~ 129 (245)
+ .++++|++++++
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred cccccccccccceEEEeccce
Confidence 2 589999888764
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.66 E-value=3.1e-15 Score=126.69 Aligned_cols=100 Identities=26% Similarity=0.336 Sum_probs=81.6
Q ss_pred ceEEEEcCCCC----CccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCcE
Q 025988 26 NVVVFLHGFPE----IWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL-----GINKV 96 (245)
Q Consensus 26 ~~vl~lHG~~~----~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l-----~~~~~ 96 (245)
++||++||+++ +...|..+++.|+++||+|+++|+||||.|... ..+.+++.+|+.++++.+ +.+++
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~----~~~~~~~~~d~~~~~~~l~~~~~g~~~i 102 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE----NLGFEGIDADIAAAIDAFREAAPHLRRI 102 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 37888888764 334466778999999999999999999998643 246777888888888876 56789
Q ss_pred EEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 97 FLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 97 ~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+++||||||.+++.++.. +++|+++|++++++.
T Consensus 103 ~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred EEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 999999999999998765 568999999998754
No 48
>PRK11071 esterase YqiA; Provisional
Probab=99.65 E-value=1.2e-15 Score=122.35 Aligned_cols=89 Identities=18% Similarity=0.158 Sum_probs=75.7
Q ss_pred ceEEEEcCCCCCccchHH--HHHHHHHC--CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEE
Q 025988 26 NVVVFLHGFPEIWYSWRH--QMVAVAAA--GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK 101 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~--~~~~l~~~--g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGh 101 (245)
|+|||+|||+++...|+. +.+.+.+. +|+|+++|+||++ +++++++.+++++++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 489999999999999985 34556542 6999999999984 357889999999999999999999
Q ss_pred ccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 102 DFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 102 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
||||.+++.+|.++|. .+|+++++..
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 9999999999999984 4578888654
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.64 E-value=6.9e-15 Score=127.48 Aligned_cols=124 Identities=13% Similarity=0.155 Sum_probs=85.2
Q ss_pred eEEEE-CCEEEE--EEecC---CCCceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC--CCCC
Q 025988 7 KYIKV-QGLNLH--VAETG---TGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP--EKAS 76 (245)
Q Consensus 7 ~~~~~-~g~~~~--~~~~g---~~~~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~--~~~~ 76 (245)
+.+++ ||..+. +...+ +..|+||++||++++... ++.++..|.++||+|+++|+||||.+...... ....
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~ 113 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGE 113 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCc
Confidence 34555 665543 33222 123599999999887554 56688899999999999999999987532111 1112
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcc--eeEEEEeCCCCC
Q 025988 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPER--VSGVITLGVPFI 130 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lv~~~~~~~ 130 (245)
.+++...+..+.++++.++++++||||||.++..+++.+++. +.++|++++|+.
T Consensus 114 ~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 114 TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 333333333344456778999999999999888888776543 899999998864
No 50
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.64 E-value=3.5e-15 Score=132.59 Aligned_cols=103 Identities=18% Similarity=0.235 Sum_probs=82.4
Q ss_pred CceEEEEcCCCCCc--cchHH-HHHHHHH--CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CC
Q 025988 25 PNVVVFLHGFPEIW--YSWRH-QMVAVAA--AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL------GI 93 (245)
Q Consensus 25 ~~~vl~lHG~~~~~--~~~~~-~~~~l~~--~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l------~~ 93 (245)
.|++|++|||.++. ..|.. ++..|.. ..|+||++|++|+|.|..+.. ....+.+++++.++++.| ++
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 34999999998754 45765 5555542 259999999999998876543 234467778888888765 47
Q ss_pred CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 94 NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++++||||||||.+|..++.++|++|.++++++++.
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 899999999999999999999999999999999864
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.63 E-value=8.8e-15 Score=130.69 Aligned_cols=102 Identities=22% Similarity=0.236 Sum_probs=80.9
Q ss_pred ceEEEEcCCCCCc-cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEEE
Q 025988 26 NVVVFLHGFPEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL---GINKVFLVAK 101 (245)
Q Consensus 26 ~~vl~lHG~~~~~-~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l---~~~~~~lvGh 101 (245)
|+||++||+.+.. ..|..+++.|.+.||+|+++|+||+|.|..... ..+...+.+++.+++... +.+++.++||
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~--~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL--TQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc--cccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 3666666665543 568888899999999999999999999965321 234455556677777655 5689999999
Q ss_pred ccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 102 DFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 102 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
||||.+++++|..+|++|+++|+++++.
T Consensus 273 S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 273 RFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred ChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 9999999999999999999999998875
No 52
>PRK10566 esterase; Provisional
Probab=99.62 E-value=7.5e-15 Score=122.11 Aligned_cols=113 Identities=22% Similarity=0.223 Sum_probs=79.3
Q ss_pred EEEEEecCC---CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCC-----CHHHHHHHHHH
Q 025988 15 NLHVAETGT---GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKA-----SFKDITNDLLA 86 (245)
Q Consensus 15 ~~~~~~~g~---~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~-----~~~~~~~~i~~ 86 (245)
.++|...+. ..|+||++||++++...|..++..|.++||+|+++|+||||.+......... ......+|+.+
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 356666442 2359999999999999999999999999999999999999986432111000 01122344444
Q ss_pred HHHHh------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 87 TLDHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 87 ~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
+++.+ +.++++++|||+||.+++.++..+|+....++++++
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~ 140 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGS 140 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCc
Confidence 44432 457899999999999999999998875444555443
No 53
>PLN02872 triacylglycerol lipase
Probab=99.62 E-value=1.2e-15 Score=135.16 Aligned_cols=125 Identities=19% Similarity=0.193 Sum_probs=94.6
Q ss_pred CceeEEEE-CCEEEEEEecC--------CCCceEEEEcCCCCCccchH------HHHHHHHHCCcEEEEeCCCCCCCCCC
Q 025988 4 IEHKYIKV-QGLNLHVAETG--------TGPNVVVFLHGFPEIWYSWR------HQMVAVAAAGFRAIAPDYRGYGLSDP 68 (245)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~g--------~~~~~vl~lHG~~~~~~~~~------~~~~~l~~~g~~via~d~~G~G~s~~ 68 (245)
.+.+.+++ ||..+...... .+.|+|||+||+..+...|. .+...|+++||+|+++|+||++.|..
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 45667777 88887765421 11348999999998888883 35557888899999999999876532
Q ss_pred -------CCCCCCCCHHHHH-HHHHHHHHHh---CCCcEEEEEEccCHHHHHHHHHhCCc---ceeEEEEeCCCC
Q 025988 69 -------PAEPEKASFKDIT-NDLLATLDHL---GINKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGVPF 129 (245)
Q Consensus 69 -------~~~~~~~~~~~~~-~~i~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~~ 129 (245)
+.....+++++++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+ +|+.++++++..
T Consensus 124 h~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 124 HVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred CCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 1222357899999 7999999986 347999999999999998544 6786 688888887764
No 54
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.62 E-value=1.1e-14 Score=121.25 Aligned_cols=117 Identities=26% Similarity=0.354 Sum_probs=96.6
Q ss_pred CCEEEEEEecCC-----CCceEEEEcCCCCCc-cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 025988 12 QGLNLHVAETGT-----GPNVVVFLHGFPEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLL 85 (245)
Q Consensus 12 ~g~~~~~~~~g~-----~~~~vl~lHG~~~~~-~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~ 85 (245)
+|..+.+..+-+ ....|+++||+++.. ..+...+..|+..||.|++.|++|||.|+.... .-.+++.+++|+.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~~v~D~~ 114 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDLVVDDVI 114 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHHHHHHHH
Confidence 777777665431 123799999998765 667888999999999999999999999997643 3458899999999
Q ss_pred HHHHHh------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 86 ATLDHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 86 ~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++.+.. ...+..+.||||||.|++.++.++|+..+|+|++++-.
T Consensus 115 ~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 115 SFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMC 164 (313)
T ss_pred HHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeeccc
Confidence 999864 23468999999999999999999999999999987654
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.62 E-value=1.3e-14 Score=118.09 Aligned_cols=117 Identities=41% Similarity=0.652 Sum_probs=95.7
Q ss_pred EECCEEEEEEecCCCCceEEEEcCCCCCccchHHHHHHHHHC--CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025988 10 KVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAA--GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT 87 (245)
Q Consensus 10 ~~~g~~~~~~~~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~--g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~ 87 (245)
...+..+.|...+.+.++++++||++++...|......+... .|+|+++|+||||.|. .. .+....+++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~ 81 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAYADDLAAL 81 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHHHHHHHHH
Confidence 335667777777653338999999999999998844444332 1899999999999997 11 34555669999999
Q ss_pred HHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 88 LDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 88 l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
++.++..+++++||||||.+++.++..+|++++++|+++++..
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999999999999999999999999999999999999997653
No 56
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.61 E-value=3.1e-15 Score=132.34 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=94.7
Q ss_pred CCEEEEEEecCC----CCceEEEEcCCCCCccc-------------hHHHHH---HHHHCCcEEEEeCCCCCCCCCCC--
Q 025988 12 QGLNLHVAETGT----GPNVVVFLHGFPEIWYS-------------WRHQMV---AVAAAGFRAIAPDYRGYGLSDPP-- 69 (245)
Q Consensus 12 ~g~~~~~~~~g~----~~~~vl~lHG~~~~~~~-------------~~~~~~---~l~~~g~~via~d~~G~G~s~~~-- 69 (245)
+..+++|...|. +...||++|++.++.+. |..++- .|-...|.||++|..|-|.|+.|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 456789999883 23499999999886432 666542 34445699999999998753322
Q ss_pred ---------C--------CCCCCCHHHHHHHHHHHHHHhCCCcEE-EEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 70 ---------A--------EPEKASFKDITNDLLATLDHLGINKVF-LVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 70 ---------~--------~~~~~~~~~~~~~i~~~l~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+ +...++++++++++..++++++++++. +|||||||++++.+|.++|++|+++|++++...
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 1 133589999999999999999999986 999999999999999999999999999987643
No 57
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.61 E-value=2.9e-15 Score=126.90 Aligned_cols=114 Identities=17% Similarity=0.220 Sum_probs=83.8
Q ss_pred EEEEEEecCCCCceEEEEcCCCCCc-cchHHHH-HHHH-HCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025988 14 LNLHVAETGTGPNVVVFLHGFPEIW-YSWRHQM-VAVA-AAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH 90 (245)
Q Consensus 14 ~~~~~~~~g~~~~~vl~lHG~~~~~-~~~~~~~-~~l~-~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 90 (245)
..+.+....+..|++|++|||.++. ..|...+ ..+. ..+|+|+++|+++++.+..+. ...+.+.+++++..+++.
T Consensus 25 ~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~~ 102 (275)
T cd00707 25 SSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLDF 102 (275)
T ss_pred hhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHHH
Confidence 3344444444445999999999987 6776544 4444 357999999999984432221 134556666677766665
Q ss_pred h------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 91 L------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 91 l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+ +.+++++|||||||.+|..++..+|++|.++++++++.
T Consensus 103 L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 103 LVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 4 45789999999999999999999999999999999774
No 58
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.59 E-value=5.9e-14 Score=116.07 Aligned_cols=104 Identities=27% Similarity=0.467 Sum_probs=95.8
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-cEEEEEEccCH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN-KVFLVAKDFGA 105 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~-~~~lvGhS~Gg 105 (245)
+||=+||-|+|..+++.+.+.|.+.|.|+|.+++||+|.++.+.+ ..|+-++.+.-+.++++.++++ +++++|||.|+
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 799999999999999999999999999999999999999998865 4788999999999999999986 57889999999
Q ss_pred HHHHHHHHhCCcceeEEEEeCCCCCCCC
Q 025988 106 RPAYLFALLHPERVSGVITLGVPFIPPG 133 (245)
Q Consensus 106 ~~a~~~a~~~p~~v~~lv~~~~~~~~~~ 133 (245)
-.|+.++..+| +.++++++++...+.
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPH 141 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccc
Confidence 99999999996 679999999877654
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.58 E-value=1.3e-14 Score=127.11 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=82.4
Q ss_pred ceEEEEcCCCCCccch-----HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH-----HHHHHHHHhCCCc
Q 025988 26 NVVVFLHGFPEIWYSW-----RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITN-----DLLATLDHLGINK 95 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~-----~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~-----~i~~~l~~l~~~~ 95 (245)
++||++||+..+...+ +.+++.|.++||+|+++|++|+|.|+.. .++++++. .+..+++..+.++
T Consensus 63 ~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-----~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 63 TPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-----LTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-----CCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3899999987655554 6899999999999999999999987543 35555543 3444555568899
Q ss_pred EEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 96 VFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 96 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
++++||||||.+++.+++.+|++|+++|+++++...
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 999999999999999999999999999999988753
No 60
>PRK13604 luxD acyl transferase; Provisional
Probab=99.57 E-value=4.6e-14 Score=119.87 Aligned_cols=119 Identities=27% Similarity=0.263 Sum_probs=86.5
Q ss_pred eEEEE-CCEEEEEEecCC------CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCC-CCCCCCCCCCCCCHH
Q 025988 7 KYIKV-QGLNLHVAETGT------GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGY-GLSDPPAEPEKASFK 78 (245)
Q Consensus 7 ~~~~~-~g~~~~~~~~g~------~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~-G~s~~~~~~~~~~~~ 78 (245)
+.+.+ +|.++.-...-+ ..++||++||++.+...+..++..|.++||.|+.+|.||+ |.|+..-. ..+..
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~--~~t~s 89 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID--EFTMS 89 (307)
T ss_pred heEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc--cCccc
Confidence 34555 788776432221 2248999999999887788999999999999999999987 89865422 22333
Q ss_pred HHHHHHHHHHHHh---CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 79 DITNDLLATLDHL---GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 79 ~~~~~i~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
....|+.++++.+ +.+++.|+||||||.+++..|... .++++|+.+|..
T Consensus 90 ~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~ 141 (307)
T PRK13604 90 IGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVV 141 (307)
T ss_pred ccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcc
Confidence 3456775555544 667899999999999997666533 388888877654
No 61
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.56 E-value=1.2e-14 Score=118.15 Aligned_cols=76 Identities=34% Similarity=0.526 Sum_probs=70.7
Q ss_pred cEEEEeCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 53 FRAIAPDYRGYGLSDP--PAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 53 ~~via~d~~G~G~s~~--~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
|+|+++|+||+|.|+. ......++.+++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999999994 144567899999999999999999999999999999999999999999999999999886
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.54 E-value=6.7e-14 Score=127.65 Aligned_cols=106 Identities=10% Similarity=0.046 Sum_probs=89.7
Q ss_pred ceEEEEcCCCCCccchH-----HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEE
Q 025988 26 NVVVFLHGFPEIWYSWR-----HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVA 100 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~-----~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvG 100 (245)
+|||++||+....+.|+ .++..|.++||+|+++|++|+|.+.+......|..+.+.+.+..+++.++.++++++|
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG 268 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVG 268 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 49999999998888885 7999999999999999999999987765445676677888888888889999999999
Q ss_pred EccCHHHHH----HHHHhC-CcceeEEEEeCCCCCC
Q 025988 101 KDFGARPAY----LFALLH-PERVSGVITLGVPFIP 131 (245)
Q Consensus 101 hS~Gg~~a~----~~a~~~-p~~v~~lv~~~~~~~~ 131 (245)
|||||.++. .+++.+ |++|+++++++++...
T Consensus 269 ~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 269 YCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred ECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 999999852 345565 7899999999987653
No 63
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.54 E-value=9.2e-15 Score=114.80 Aligned_cols=125 Identities=21% Similarity=0.294 Sum_probs=102.4
Q ss_pred ceeEEEECCEEEEEEecCCCCceEEEEcCCCCC-ccchHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCC-CCHHHHH
Q 025988 5 EHKYIKVQGLNLHVAETGTGPNVVVFLHGFPEI-WYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEK-ASFKDIT 81 (245)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~~~~~vl~lHG~~~~-~~~~~~~~~~l~~~-g~~via~d~~G~G~s~~~~~~~~-~~~~~~~ 81 (245)
++..+.+||.+++|...|+|+..||++.|..+| +..|.+++..|.+. -++|+++|.||||.|..|..... .-...-+
T Consensus 22 te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da 101 (277)
T KOG2984|consen 22 TESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDA 101 (277)
T ss_pred hhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhH
Confidence 455678899999999999998789999998655 55698888776544 38999999999999987754211 1233346
Q ss_pred HHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 82 NDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 82 ~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++..++++.|+.+++.++|+|=||..|+..|+++++.|.++|+.++.-
T Consensus 102 ~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a 149 (277)
T KOG2984|consen 102 EYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA 149 (277)
T ss_pred HHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc
Confidence 667788899999999999999999999999999999999999987653
No 64
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.53 E-value=8.7e-14 Score=130.84 Aligned_cols=109 Identities=23% Similarity=0.172 Sum_probs=87.0
Q ss_pred eEEEECCEEEEEEecCCC----------CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCC-------
Q 025988 7 KYIKVQGLNLHVAETGTG----------PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPP------- 69 (245)
Q Consensus 7 ~~~~~~g~~~~~~~~g~~----------~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~------- 69 (245)
.....++.++.|...|.| .|+|||+||+.++...|..+++.|.++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 334446766766665433 238999999999999999999999988999999999999999443
Q ss_pred ---CCCC-----------CCCHHHHHHHHHHHHHHhC----------------CCcEEEEEEccCHHHHHHHHHhC
Q 025988 70 ---AEPE-----------KASFKDITNDLLATLDHLG----------------INKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 70 ---~~~~-----------~~~~~~~~~~i~~~l~~l~----------------~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
.+.. ..++++.+.|+..+...++ ..+++++||||||+++..++...
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1111 1378999999999998886 34899999999999999998763
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.52 E-value=1.4e-13 Score=104.70 Aligned_cols=93 Identities=27% Similarity=0.389 Sum_probs=75.8
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~ 106 (245)
+||++||++++...|..+++.|++.||.|+.+|+|++|.+... ...+++.+++. .+..+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 6999999999999999999999999999999999999988321 12222222222 1123778999999999999
Q ss_pred HHHHHHHhCCcceeEEEEeCC
Q 025988 107 PAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 107 ~a~~~a~~~p~~v~~lv~~~~ 127 (245)
+++.++.+. .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999998 67999999998
No 66
>PLN00021 chlorophyllase
Probab=99.51 E-value=2.1e-13 Score=117.33 Aligned_cols=102 Identities=24% Similarity=0.298 Sum_probs=75.1
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCCcEEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-------LGINKVFL 98 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~-------l~~~~~~l 98 (245)
|+|||+||++.+...|..+++.|++.||.|+++|++|++.+..... ..+..++.+.+.+.++. .+.+++++
T Consensus 53 PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~--i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 53 PVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDE--IKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhh--HHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 4999999999999999999999999999999999999754321110 01112222223322222 24578999
Q ss_pred EEEccCHHHHHHHHHhCCc-----ceeEEEEeCCCC
Q 025988 99 VAKDFGARPAYLFALLHPE-----RVSGVITLGVPF 129 (245)
Q Consensus 99 vGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~~ 129 (245)
+|||+||.+++.+|..+++ +++++|++++..
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 9999999999999999874 689999988753
No 67
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.51 E-value=1.1e-13 Score=116.73 Aligned_cols=102 Identities=21% Similarity=0.334 Sum_probs=90.6
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCcEEEE
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG----INKVFLV 99 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~-g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~----~~~~~lv 99 (245)
.|+++++||+.++...|+.+...|++. +-.|+++|+|-||.|.+.. .++.+.+++|+..|++..+ ..++.++
T Consensus 52 ~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~ 128 (315)
T KOG2382|consen 52 APPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVLL 128 (315)
T ss_pred CCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCceec
Confidence 359999999999999999999999765 6789999999999998764 4678999999999999884 6789999
Q ss_pred EEccCH-HHHHHHHHhCCcceeEEEEeCCCC
Q 025988 100 AKDFGA-RPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 100 GhS~Gg-~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
|||||| .+++..+...|+.+..+|+++.++
T Consensus 129 GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP 159 (315)
T KOG2382|consen 129 GHSMGGVKVAMAETLKKPDLIERLIVEDISP 159 (315)
T ss_pred ccCcchHHHHHHHHHhcCcccceeEEEecCC
Confidence 999999 888888899999999999988664
No 68
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.51 E-value=4.2e-14 Score=120.15 Aligned_cols=126 Identities=24% Similarity=0.374 Sum_probs=106.9
Q ss_pred CCceeEEEECCEEEEEEecC-------CCCceEEEEcCCCCCccchHHHHHHHHHC---------CcEEEEeCCCCCCCC
Q 025988 3 KIEHKYIKVQGLNLHVAETG-------TGPNVVVFLHGFPEIWYSWRHQMVAVAAA---------GFRAIAPDYRGYGLS 66 (245)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~g-------~~~~~vl~lHG~~~~~~~~~~~~~~l~~~---------g~~via~d~~G~G~s 66 (245)
.+.+...++.|.+||+.... +...|+|++||||+|-..+-.+++.|.+. -|.||+|.+||||.|
T Consensus 123 ~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS 202 (469)
T KOG2565|consen 123 QFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS 202 (469)
T ss_pred hhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccC
Confidence 34555567799999997654 22248999999999999999999998754 378999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 67 DPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 67 ~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.+.. ...+..+.|.-+..++-+||..+..+-|-+||+.|+..+|..+|++|.|+-+-.+..
T Consensus 203 d~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 203 DAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred cCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 99864 467888999999999999999999999999999999999999999999987655443
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.47 E-value=7.7e-13 Score=112.14 Aligned_cols=106 Identities=21% Similarity=0.297 Sum_probs=78.6
Q ss_pred CceEEEEcCCCCCccchHHH--HHHH-HHCCcEEEEeCC--CCCCCCCCCC------------------CCCCCCHHH-H
Q 025988 25 PNVVVFLHGFPEIWYSWRHQ--MVAV-AAAGFRAIAPDY--RGYGLSDPPA------------------EPEKASFKD-I 80 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~--~~~l-~~~g~~via~d~--~G~G~s~~~~------------------~~~~~~~~~-~ 80 (245)
.|+|+|+||++++...|... +..+ .+.|+.|++||. +|+|.+.... ....++... +
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 35999999999999988543 3344 446899999998 5555332110 001233333 4
Q ss_pred HHHHHHHHHH---hCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 81 TNDLLATLDH---LGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 81 ~~~i~~~l~~---l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
++++..++++ ++.++++++||||||.+++.++.++|+++++++++++...
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 6788888877 3567899999999999999999999999999999887654
No 70
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.46 E-value=3.9e-13 Score=132.15 Aligned_cols=101 Identities=20% Similarity=0.271 Sum_probs=81.5
Q ss_pred ceEEEEcCCCCCccchHHH-----HHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCcEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQ-----MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH---LGINKVF 97 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~-----~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~---l~~~~~~ 97 (245)
+||||+||++.+.+.|+.+ ++.|.++||+|+++| +|.++.+.....+++.+++..+.+.++. +..++++
T Consensus 68 ~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~ 144 (994)
T PRK07868 68 PPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVH 144 (994)
T ss_pred CcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceE
Confidence 4999999999999999875 888988999999999 5777665332235777777666666654 3457899
Q ss_pred EEEEccCHHHHHHHHHhC-CcceeEEEEeCCCC
Q 025988 98 LVAKDFGARPAYLFALLH-PERVSGVITLGVPF 129 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~~~-p~~v~~lv~~~~~~ 129 (245)
++||||||.+++.+++.+ |++|+++|+++++.
T Consensus 145 lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 145 LVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred EEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 999999999999998755 56899999998885
No 71
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.44 E-value=1.1e-12 Score=106.83 Aligned_cols=105 Identities=17% Similarity=0.198 Sum_probs=73.0
Q ss_pred CceEEEEcCCCCCccchH---HHHHHHHHCCcEEEEeCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhCC
Q 025988 25 PNVVVFLHGFPEIWYSWR---HQMVAVAAAGFRAIAPDYRGYGLSDPPAE--------PEKASFKDITNDLLATLDHLGI 93 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~---~~~~~l~~~g~~via~d~~G~G~s~~~~~--------~~~~~~~~~~~~i~~~l~~l~~ 93 (245)
.|+||++||++++...+. .+...+.+.||.|++||.+|++.+...-+ .......++.+-+..+.+..++
T Consensus 13 ~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 92 (212)
T TIGR01840 13 RALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSI 92 (212)
T ss_pred CCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCc
Confidence 459999999998877665 24445556799999999999875432100 0011122222222333333333
Q ss_pred --CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 94 --NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 94 --~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++++|+|||+||.+++.++..+|+++.+++.++++.
T Consensus 93 d~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 93 DPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred ChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 589999999999999999999999999999888764
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.41 E-value=4.3e-12 Score=108.04 Aligned_cols=107 Identities=21% Similarity=0.262 Sum_probs=77.0
Q ss_pred CCceEEEEcCCCCCccchHHH---HHHHHHCCcEEEEeCCCCCCC-----CCC-------------CC------CCCCCC
Q 025988 24 GPNVVVFLHGFPEIWYSWRHQ---MVAVAAAGFRAIAPDYRGYGL-----SDP-------------PA------EPEKAS 76 (245)
Q Consensus 24 ~~~~vl~lHG~~~~~~~~~~~---~~~l~~~g~~via~d~~G~G~-----s~~-------------~~------~~~~~~ 76 (245)
+-|+|+|+||++++...|... ...+...|+.|+.||..++|. +.. .. ....+-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 346999999999988877543 355666799999999887661 110 00 000112
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.+++...+....+.++.++++++||||||..++.++.++|+++++++.+++...
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 333444444545556888999999999999999999999999999999987754
No 73
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.41 E-value=1.1e-12 Score=121.34 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=87.1
Q ss_pred CCEEEEEE---ecCC-CCceEEEEcCCCCCcc---chH-HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025988 12 QGLNLHVA---ETGT-GPNVVVFLHGFPEIWY---SWR-HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (245)
Q Consensus 12 ~g~~~~~~---~~g~-~~~~vl~lHG~~~~~~---~~~-~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~ 83 (245)
||.++++. ..+. ..|+||++||++.+.. .+. .....|.++||.|+++|+||+|.|+.... .++ ...++|
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~D 81 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAAD 81 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccchH
Confidence 77777743 2232 2358999999997643 222 24467888899999999999999986532 223 456788
Q ss_pred HHHHHHHhC-----CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 84 LLATLDHLG-----INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 84 i~~~l~~l~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.++++.+. ..++.++|||+||.+++.+|..+|++++++|..++..
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 888887762 2589999999999999999999999999999877653
No 74
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.36 E-value=4.4e-12 Score=86.97 Aligned_cols=76 Identities=30% Similarity=0.371 Sum_probs=63.7
Q ss_pred CEEEEEEecCC--C-CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025988 13 GLNLHVAETGT--G-PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD 89 (245)
Q Consensus 13 g~~~~~~~~g~--~-~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~ 89 (245)
|.+++++.+.+ . +.+|+++||++++...+..+++.|+++||.|+++|+||||.|+.... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 56777776652 1 33899999999999999999999999999999999999999986543 34689999999998864
No 75
>PRK11460 putative hydrolase; Provisional
Probab=99.33 E-value=2e-11 Score=100.98 Aligned_cols=105 Identities=18% Similarity=0.138 Sum_probs=70.2
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC---------CCCC---CHHHHHHHHHHHH----
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE---------PEKA---SFKDITNDLLATL---- 88 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~---------~~~~---~~~~~~~~i~~~l---- 88 (245)
.++||++||++++...|..+.+.|.+.++.+..++++|...+..... .... ++....+.+.+++
T Consensus 16 ~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 95 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQ 95 (232)
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 34899999999999999999999987655445555555432211100 0011 1222223333333
Q ss_pred HHhCC--CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 89 DHLGI--NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 89 ~~l~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.+++ ++++++|||+||.+++.++..+|+.+.++|.+++.+
T Consensus 96 ~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 96 QQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 33343 579999999999999999999999888888887654
No 76
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.27 E-value=6.2e-11 Score=97.50 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=74.7
Q ss_pred CCCceEEEEcCCCCCccchHHHHHHHHH--------CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 025988 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAA--------AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL--- 91 (245)
Q Consensus 23 ~~~~~vl~lHG~~~~~~~~~~~~~~l~~--------~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l--- 91 (245)
+|. +|||+||..++...|+.+...+.+ ..+++++.|+......-.... -....+.+.+.+..+++.+
T Consensus 3 ~g~-pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~-l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 3 SGI-PVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT-LQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCC-EEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc-HHHHHHHHHHHHHHHHHhhhhc
Confidence 345 999999999999999888766622 258899999876432211110 0112233444555555555
Q ss_pred --CCCcEEEEEEccCHHHHHHHHHhCC---cceeEEEEeCCCCCCC
Q 025988 92 --GINKVFLVAKDFGARPAYLFALLHP---ERVSGVITLGVPFIPP 132 (245)
Q Consensus 92 --~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lv~~~~~~~~~ 132 (245)
+.+++++|||||||.+|..++...+ +.|+.+|.+++|...+
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 5678999999999999988776543 4799999999987643
No 77
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.26 E-value=3e-11 Score=103.59 Aligned_cols=119 Identities=22% Similarity=0.292 Sum_probs=92.1
Q ss_pred CCEEEEEEecCC----CCceEEEEcCCCCCccc-----------hHHHH---HHHHHCCcEEEEeCCCCCC-CCCCCCC-
Q 025988 12 QGLNLHVAETGT----GPNVVVFLHGFPEIWYS-----------WRHQM---VAVAAAGFRAIAPDYRGYG-LSDPPAE- 71 (245)
Q Consensus 12 ~g~~~~~~~~g~----~~~~vl~lHG~~~~~~~-----------~~~~~---~~l~~~g~~via~d~~G~G-~s~~~~~- 71 (245)
++..|.|..+|. ....||++||+.++.+. |..++ ..+....|-||+.|..|.+ .|+.|..
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 456788998882 12389999999885443 44443 1233346999999999976 5555421
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHhCCCcEE-EEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 72 ----------PEKASFKDITNDLLATLDHLGINKVF-LVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 72 ----------~~~~~~~~~~~~i~~~l~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
...+++++++..-..++++||++++. +||-||||+.++.++..+||+|.++|.++++..
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r 183 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR 183 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccccc
Confidence 13478889999889999999999985 899999999999999999999999999987643
No 78
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.25 E-value=8.3e-11 Score=96.51 Aligned_cols=99 Identities=18% Similarity=0.182 Sum_probs=83.6
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-cEEEEEEccCH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN-KVFLVAKDFGA 105 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~-~~~lvGhS~Gg 105 (245)
+|+|+|+.+++...|.++++.+....+.|++++.+|.+.... ...+++++++...+.+.....+ ++.|+|||+||
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 899999999999999999999975348999999999983322 2468999999999888877655 99999999999
Q ss_pred HHHHHHHHhC---CcceeEEEEeCCCC
Q 025988 106 RPAYLFALLH---PERVSGVITLGVPF 129 (245)
Q Consensus 106 ~~a~~~a~~~---p~~v~~lv~~~~~~ 129 (245)
.+|+.+|.+- -..+..+++++++.
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCC
Confidence 9999999773 34599999999754
No 79
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.20 E-value=1e-10 Score=104.69 Aligned_cols=123 Identities=16% Similarity=0.267 Sum_probs=87.3
Q ss_pred eeEEEE-CCEEEEEEe--cCCCCceEEEE-cCC---CCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHH
Q 025988 6 HKYIKV-QGLNLHVAE--TGTGPNVVVFL-HGF---PEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFK 78 (245)
Q Consensus 6 ~~~~~~-~g~~~~~~~--~g~~~~~vl~l-HG~---~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~ 78 (245)
.++... +|+.+.+.. .|. . .+-.+ ... ..+...|..+++.|.+.||.+ ..|++|+|.+.+.........+
T Consensus 70 ~~~~~~~~gv~i~vp~~~~g~-~-~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~ 146 (440)
T PLN02733 70 GKTVSLDPKTEIVVPDDRYGL-Y-AIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMD 146 (440)
T ss_pred CceecCCCCceEEcCCCCCCc-e-eeEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHH
Confidence 344555 578777664 232 1 22222 111 345678999999999998765 8999999998765321122345
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcc----eeEEEEeCCCCCC
Q 025988 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPER----VSGVITLGVPFIP 131 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v~~lv~~~~~~~~ 131 (245)
.+.+.+.++.+..+.++++||||||||.++..++..+|+. |+++|.+++|+..
T Consensus 147 ~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 147 GLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 5555666666667889999999999999999999988864 7889999998765
No 80
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.19 E-value=9.5e-10 Score=91.36 Aligned_cols=129 Identities=23% Similarity=0.270 Sum_probs=102.4
Q ss_pred ceeEEEECCEEEEEEecC--C-CCceEEEEcCCCCCccc-hHHH-----HHHHHHCCcEEEEeCCCCCCCC--CCCCCCC
Q 025988 5 EHKYIKVQGLNLHVAETG--T-GPNVVVFLHGFPEIWYS-WRHQ-----MVAVAAAGFRAIAPDYRGYGLS--DPPAEPE 73 (245)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g--~-~~~~vl~lHG~~~~~~~-~~~~-----~~~l~~~g~~via~d~~G~G~s--~~~~~~~ 73 (245)
+++.|.+.-..+|+...| + ++|++|-.|..+-+... +..+ +..+.++ |.|+-+|.||+-.. .-|.+..
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred eeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCC
Confidence 455666644557776666 2 24589999999977666 5543 4566666 99999999998554 3445544
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCCCc
Q 025988 74 KASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGT 134 (245)
Q Consensus 74 ~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~~~ 134 (245)
-.+++++++++..++++++.+.++-+|--.|+.|..++|..||+||.+||++++-...++-
T Consensus 102 yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gw 162 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGW 162 (326)
T ss_pred CCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchH
Confidence 5699999999999999999999999999999999999999999999999999987655443
No 81
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.16 E-value=5.8e-10 Score=93.35 Aligned_cols=127 Identities=24% Similarity=0.277 Sum_probs=88.0
Q ss_pred eEEEECCEEEEEEecCC---CCceEEEEcCCCCCccc-hHHH-----HHHHHHCCcEEEEeCCCCCCCCCC--CCCCCCC
Q 025988 7 KYIKVQGLNLHVAETGT---GPNVVVFLHGFPEIWYS-WRHQ-----MVAVAAAGFRAIAPDYRGYGLSDP--PAEPEKA 75 (245)
Q Consensus 7 ~~~~~~g~~~~~~~~g~---~~~~vl~lHG~~~~~~~-~~~~-----~~~l~~~g~~via~d~~G~G~s~~--~~~~~~~ 75 (245)
+.+++.-..+++...|. ++|++|-.|-.+-+..+ |..+ +..+.+ .+.|+-+|.||+..... |.+..-.
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCccccccccccc
Confidence 56777767788877772 25699999999988776 6655 355655 59999999999876443 3443345
Q ss_pred CHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCCCc
Q 025988 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGT 134 (245)
Q Consensus 76 ~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~~~ 134 (245)
+++++++++.+++++++++.++-+|--.||.|..++|..+|++|.++|++++....++-
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw 139 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW 139 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH
Confidence 99999999999999999999999999999999999999999999999999988766554
No 82
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.12 E-value=5.9e-10 Score=92.44 Aligned_cols=102 Identities=31% Similarity=0.383 Sum_probs=73.1
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHh------CCCcEEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL-DHL------GINKVFL 98 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l-~~l------~~~~~~l 98 (245)
|+|||+||+.-....+..++++++..||-||++|+...+......+ .....++++.+.+=+ ..+ +..++.|
T Consensus 18 PVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~--~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 18 PVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDE--VASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchh--HHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 5999999999777778889999999999999999776443211110 111222222222211 111 4568999
Q ss_pred EEEccCHHHHHHHHHhC-----CcceeEEEEeCCCC
Q 025988 99 VAKDFGARPAYLFALLH-----PERVSGVITLGVPF 129 (245)
Q Consensus 99 vGhS~Gg~~a~~~a~~~-----p~~v~~lv~~~~~~ 129 (245)
.|||.||-+|..++..+ +.+++++|+++|.-
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999887 56899999999875
No 83
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.06 E-value=1.1e-09 Score=110.58 Aligned_cols=102 Identities=16% Similarity=0.085 Sum_probs=87.5
Q ss_pred cCCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEE
Q 025988 21 TGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLV 99 (245)
Q Consensus 21 ~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~-~~~~lv 99 (245)
.++++ +++++||++++...|..+++.|.. +++|+++|++|++.+.. ..++++++++++.+.++.+.. .+++++
T Consensus 1065 ~~~~~-~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1065 EGDGP-TLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred cCCCC-CeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 34555 899999999999999999999975 59999999999986522 357999999999999988754 489999
Q ss_pred EEccCHHHHHHHHHh---CCcceeEEEEeCCC
Q 025988 100 AKDFGARPAYLFALL---HPERVSGVITLGVP 128 (245)
Q Consensus 100 GhS~Gg~~a~~~a~~---~p~~v~~lv~~~~~ 128 (245)
||||||.+|+++|.+ .++++..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999986 57889999998763
No 84
>PRK10162 acetyl esterase; Provisional
Probab=99.06 E-value=2.4e-09 Score=92.72 Aligned_cols=101 Identities=21% Similarity=0.206 Sum_probs=72.2
Q ss_pred CceEEEEcCCC---CCccchHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHH---HHHHHHHHHhCC--Cc
Q 025988 25 PNVVVFLHGFP---EIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDIT---NDLLATLDHLGI--NK 95 (245)
Q Consensus 25 ~~~vl~lHG~~---~~~~~~~~~~~~l~~-~g~~via~d~~G~G~s~~~~~~~~~~~~~~~---~~i~~~l~~l~~--~~ 95 (245)
.|+||++||.+ ++...|..+...|++ .|+.|+++|+|.......| ..+++.. +.+.+..+.+++ ++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p-----~~~~D~~~a~~~l~~~~~~~~~d~~~ 155 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP-----QAIEEIVAVCCYFHQHAEDYGINMSR 155 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC-----CcHHHHHHHHHHHHHhHHHhCCChhH
Confidence 35899999976 666778888888876 4899999999965433222 2333332 333333445665 58
Q ss_pred EEEEEEccCHHHHHHHHHhC------CcceeEEEEeCCCCC
Q 025988 96 VFLVAKDFGARPAYLFALLH------PERVSGVITLGVPFI 130 (245)
Q Consensus 96 ~~lvGhS~Gg~~a~~~a~~~------p~~v~~lv~~~~~~~ 130 (245)
++++|+|+||.+++.++... +.+++++|++.+...
T Consensus 156 i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 156 IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999999988753 357899999877543
No 85
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.03 E-value=3.3e-09 Score=84.56 Aligned_cols=107 Identities=21% Similarity=0.278 Sum_probs=85.3
Q ss_pred ecCCCCceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-c-
Q 025988 20 ETGTGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN-K- 95 (245)
Q Consensus 20 ~~g~~~~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~-~- 95 (245)
+.|+.. .+|++|||-++... ...++..|.+.|+.++-+|++|.|.|...-.+..|+. .|+|+..+++.+... +
T Consensus 29 ~tgs~e-~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~--eadDL~sV~q~~s~~nr~ 105 (269)
T KOG4667|consen 29 ETGSTE-IVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNT--EADDLHSVIQYFSNSNRV 105 (269)
T ss_pred ccCCce-EEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccc--hHHHHHHHHHHhccCceE
Confidence 455666 99999999876554 4566788999999999999999999987654444544 469999999998433 2
Q ss_pred -EEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 96 -VFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 96 -~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
-+++|||-||.+++.++.++++ ++-+|.+++-+.
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd 140 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD 140 (269)
T ss_pred EEEEEeecCccHHHHHHHHhhcC-chheEEcccccc
Confidence 3789999999999999999988 777777776654
No 86
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.02 E-value=7.1e-10 Score=97.36 Aligned_cols=103 Identities=20% Similarity=0.201 Sum_probs=69.3
Q ss_pred ceEEEEcCCCCCccchHHH-HHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQ-MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL---GINKVFLVAK 101 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~-~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l---~~~~~~lvGh 101 (245)
|+||++-|.-+....+..+ .+.|..+|+.++++|+||.|.|.+.+-..+ .+.+-+.|.+.+... +.++|.++|.
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D--~~~l~~aVLd~L~~~p~VD~~RV~~~G~ 268 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQD--SSRLHQAVLDYLASRPWVDHTRVGAWGF 268 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S---CCHHHHHHHHHHHHSTTEEEEEEEEEEE
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcC--HHHHHHHHHHHHhcCCccChhheEEEEe
Confidence 4666666666666564444 466888999999999999999865432222 234566666666655 4568999999
Q ss_pred ccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 102 DFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 102 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
|+||.+|.++|..+++|++++|.++++..
T Consensus 269 SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 269 SFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp THHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred ccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 99999999999999999999999998753
No 87
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.02 E-value=5.1e-09 Score=85.85 Aligned_cols=96 Identities=18% Similarity=0.286 Sum_probs=69.3
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hC-CCcEEEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH----LG-INKVFLV 99 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~-~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~----l~-~~~~~lv 99 (245)
+++|++||.......-..+...|.. .+++|+++|.+|+|.|...+.. . .+-+|+.++-+. .| .+++++.
T Consensus 61 ~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE--~---n~y~Di~avye~Lr~~~g~~~~Iil~ 135 (258)
T KOG1552|consen 61 PTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE--R---NLYADIKAVYEWLRNRYGSPERIILY 135 (258)
T ss_pred eEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc--c---cchhhHHHHHHHHHhhcCCCceEEEE
Confidence 4999999995544433333333433 3799999999999999875432 2 333444444433 33 5789999
Q ss_pred EEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 100 AKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 100 GhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
|+|+|+..+..+|++.| ++++|+.++-
T Consensus 136 G~SiGt~~tv~Lasr~~--~~alVL~SPf 162 (258)
T KOG1552|consen 136 GQSIGTVPTVDLASRYP--LAAVVLHSPF 162 (258)
T ss_pred EecCCchhhhhHhhcCC--cceEEEeccc
Confidence 99999999999999999 8999998753
No 88
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.02 E-value=4.5e-09 Score=88.68 Aligned_cols=105 Identities=21% Similarity=0.197 Sum_probs=89.8
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHC---CcEEEEeCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhC------
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAA---GFRAIAPDYRGYGLSDPP----AEPEKASFKDITNDLLATLDHLG------ 92 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~---g~~via~d~~G~G~s~~~----~~~~~~~~~~~~~~i~~~l~~l~------ 92 (245)
..+||+.|.|+....+..++..|.+. .+.|++..+.||-.++.. .+...|+++++++...++++++-
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~ 82 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKP 82 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCC
Confidence 37999999999999999999888744 799999999999887765 13457899999998888887762
Q ss_pred CCcEEEEEEccCHHHHHHHHHhCC---cceeEEEEeCCCCC
Q 025988 93 INKVFLVAKDFGARPAYLFALLHP---ERVSGVITLGVPFI 130 (245)
Q Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lv~~~~~~~ 130 (245)
..+++++|||+|+.+++++..+.+ .+|.+++++-|...
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 357999999999999999999999 78999999987653
No 89
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=9.3e-09 Score=85.20 Aligned_cols=104 Identities=26% Similarity=0.284 Sum_probs=80.3
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC--C---C-----CCCHHHHHHHHHHHHHHhC---
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE--P---E-----KASFKDITNDLLATLDHLG--- 92 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~--~---~-----~~~~~~~~~~i~~~l~~l~--- 92 (245)
|.||++|++.+-....+.+.+.|+..||.|++||+-+......... . . ..+..+...|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 6999999999999999999999999999999999987332222111 0 0 1223567778888887772
Q ss_pred ---CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 93 ---INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 93 ---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.+++.++|+||||.+++.++...| .+++.|..-+...
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~ 147 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI 147 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC
Confidence 467999999999999999999888 5888887655443
No 90
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.00 E-value=1.2e-09 Score=89.31 Aligned_cols=110 Identities=25% Similarity=0.306 Sum_probs=65.4
Q ss_pred CCCCceEEEEcCCCCCccchHHHHH-HHHHCCcEEEEeCCCC------CCC---CCC-----CCCC--CCCCHHHHHHHH
Q 025988 22 GTGPNVVVFLHGFPEIWYSWRHQMV-AVAAAGFRAIAPDYRG------YGL---SDP-----PAEP--EKASFKDITNDL 84 (245)
Q Consensus 22 g~~~~~vl~lHG~~~~~~~~~~~~~-~l~~~g~~via~d~~G------~G~---s~~-----~~~~--~~~~~~~~~~~i 84 (245)
++..++||||||++++...|..+.. .+.....+++.|+-|- .|. +-- .... ....+++.++.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 3445699999999999977766554 2223457888887652 222 110 0100 011233444455
Q ss_pred HHHHHHh-----CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 85 LATLDHL-----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 85 ~~~l~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
.++++.. ..+++++.|+|+||++++.++..+|+.+.++|.+++....
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 5666543 4468999999999999999999999999999999976543
No 91
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.99 E-value=2.3e-09 Score=94.59 Aligned_cols=129 Identities=24% Similarity=0.361 Sum_probs=97.8
Q ss_pred CceeEEEE-CCEEEEEE--ecC-CCCceEEEEcCCCCCccchHH------HHHHHHHCCcEEEEeCCCCCCCCCCC----
Q 025988 4 IEHKYIKV-QGLNLHVA--ETG-TGPNVVVFLHGFPEIWYSWRH------QMVAVAAAGFRAIAPDYRGYGLSDPP---- 69 (245)
Q Consensus 4 ~~~~~~~~-~g~~~~~~--~~g-~~~~~vl~lHG~~~~~~~~~~------~~~~l~~~g~~via~d~~G~G~s~~~---- 69 (245)
.+.+.|++ ||.-+... ..+ ...|+|++.||+..++..|-. +.-.|+++||.|..-+.||--.|.+.
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~ 127 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLS 127 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccC
Confidence 34566666 88654432 222 334599999999999999954 45568899999999999997777542
Q ss_pred ----CCCCCCCHHHHHH-HHHHHHHHh----CCCcEEEEEEccCHHHHHHHHHhCCc---ceeEEEEeCCCCCCC
Q 025988 70 ----AEPEKASFKDITN-DLLATLDHL----GINKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGVPFIPP 132 (245)
Q Consensus 70 ----~~~~~~~~~~~~~-~i~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~~~~~ 132 (245)
.+...+++.+++. |+.+.++.. +.++++.||||.|+.+...+.+..|+ +|+.+++++|+....
T Consensus 128 ~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 128 PSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred CcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 1234568888776 777777664 77899999999999999999998876 799999999886443
No 92
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.98 E-value=2e-09 Score=85.87 Aligned_cols=113 Identities=19% Similarity=0.253 Sum_probs=83.5
Q ss_pred CCEEEEEEec--CCCCceEEEEcCCCCCccchHHHHHHH-HHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 025988 12 QGLNLHVAET--GTGPNVVVFLHGFPEIWYSWRHQMVAV-AAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL 88 (245)
Q Consensus 12 ~g~~~~~~~~--g~~~~~vl~lHG~~~~~~~~~~~~~~l-~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l 88 (245)
|.++++.... .+..|++|++||..++....-+.+..+ ...+.+|+.++.||||.|+..+... .+.-|-.+++
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~-----GL~lDs~avl 137 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE-----GLKLDSEAVL 137 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccc-----ceeccHHHHH
Confidence 6777764322 233459999999999877766666654 3458999999999999998754322 2233444455
Q ss_pred HHh------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 89 DHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 89 ~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.+ +-.++++.|.|.||.+|..+|++..+++.++|+-++-.
T Consensus 138 dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~ 184 (300)
T KOG4391|consen 138 DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFL 184 (300)
T ss_pred HHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhc
Confidence 544 44689999999999999999999999999999876543
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.96 E-value=6.8e-09 Score=94.59 Aligned_cols=101 Identities=10% Similarity=0.107 Sum_probs=83.5
Q ss_pred ceEEEEcCCCCCccch-----HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcE
Q 025988 26 NVVVFLHGFPEIWYSW-----RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKV 96 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~-----~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l----~~~~~ 96 (245)
.|||+++.+---.+.+ +.+++.|.++||+|+.+|.+.-+.++ ...+++++++.+.+.++.. |.+++
T Consensus 216 ~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~v 290 (560)
T TIGR01839 216 RPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRDL 290 (560)
T ss_pred CcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 4899999998766666 57899999999999999999866553 2467888887777766655 78899
Q ss_pred EEEEEccCHHHHHH----HHHhCCc-ceeEEEEeCCCCCC
Q 025988 97 FLVAKDFGARPAYL----FALLHPE-RVSGVITLGVPFIP 131 (245)
Q Consensus 97 ~lvGhS~Gg~~a~~----~a~~~p~-~v~~lv~~~~~~~~ 131 (245)
.++|||+||.++.. +++.+++ +|+.++++.++...
T Consensus 291 nl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 291 NLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred eEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 99999999999986 7888886 89999999887654
No 94
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.95 E-value=8.6e-10 Score=89.92 Aligned_cols=88 Identities=24% Similarity=0.234 Sum_probs=56.6
Q ss_pred eEEEEcCCCC-CccchHHHHHHHHHCCcE---EEEeCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCcEEEEE
Q 025988 27 VVVFLHGFPE-IWYSWRHQMVAVAAAGFR---AIAPDYRGYGLSDPPAEP--EKASFKDITNDLLATLDHLGINKVFLVA 100 (245)
Q Consensus 27 ~vl~lHG~~~-~~~~~~~~~~~l~~~g~~---via~d~~G~G~s~~~~~~--~~~~~~~~~~~i~~~l~~l~~~~~~lvG 100 (245)
||||+||..+ ....|..+++.|.++||. |+++++-....+...... ...+.+++++.|..+++.-|. +|-|||
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 8999999998 677899999999999999 799998544432211100 011234566666677777799 999999
Q ss_pred EccCHHHHHHHHHhC
Q 025988 101 KDFGARPAYLFALLH 115 (245)
Q Consensus 101 hS~Gg~~a~~~a~~~ 115 (245)
|||||.++..+....
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999998776643
No 95
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.94 E-value=2.9e-09 Score=87.28 Aligned_cols=101 Identities=25% Similarity=0.363 Sum_probs=72.5
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHh-------CCCcEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEK-ASFKDITNDLLATLDHL-------GINKVF 97 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~-~~~~~~~~~i~~~l~~l-------~~~~~~ 97 (245)
|.|+|+||+.-....+..++.+++..||-|+||++-.--. +..... ......++.+..-+..+ +++++.
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kla 123 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLA 123 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEE
Confidence 4899999999888889999999999999999999985321 211100 11222223333333332 567899
Q ss_pred EEEEccCHHHHHHHHHhCC-c-ceeEEEEeCCCC
Q 025988 98 LVAKDFGARPAYLFALLHP-E-RVSGVITLGVPF 129 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~~~p-~-~v~~lv~~~~~~ 129 (245)
++|||+||-.|..+|..+. + .+++||.+++.-
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 9999999999999998773 2 588999888764
No 96
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.93 E-value=5.7e-08 Score=85.05 Aligned_cols=123 Identities=20% Similarity=0.241 Sum_probs=83.6
Q ss_pred eeEEEE-CCEEEEE--EecC--------CCCceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC
Q 025988 6 HKYIKV-QGLNLHV--AETG--------TGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP 72 (245)
Q Consensus 6 ~~~~~~-~g~~~~~--~~~g--------~~~~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~ 72 (245)
..++++ ||..+.+ .+.. ...|+||++||+.+++.. -+.++..+.++||+|++++.||+|.+.-...
T Consensus 95 Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp- 173 (409)
T KOG1838|consen 95 REIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP- 173 (409)
T ss_pred eEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC-
Confidence 445666 6655543 3222 123599999999765544 5677788888999999999999999865432
Q ss_pred CCCCHHHHHHHHHHHHHHh----CCCcEEEEEEccCHHHHHHHHHhCCc--ceeEEEEeCCCCC
Q 025988 73 EKASFKDITNDLLATLDHL----GINKVFLVAKDFGARPAYLFALLHPE--RVSGVITLGVPFI 130 (245)
Q Consensus 73 ~~~~~~~~~~~i~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~~ 130 (245)
.-|+. ...+|+.++++++ -..+...||.||||++.+.+..+-.+ .+.+.+.++.|+.
T Consensus 174 r~f~a-g~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 174 RLFTA-GWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred ceeec-CCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 11221 1345555555554 55689999999999999998877544 3566666666664
No 97
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.91 E-value=1.8e-08 Score=85.47 Aligned_cols=102 Identities=20% Similarity=0.239 Sum_probs=71.6
Q ss_pred ceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEE
Q 025988 26 NVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVFLV 99 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l----~~~~~~lv 99 (245)
|.||++||+-++..+ -+.++..+.++||.|++++.||++.+...... -|+.- ..+|+..+++.+ ...++..|
T Consensus 76 P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~-~yh~G-~t~D~~~~l~~l~~~~~~r~~~av 153 (345)
T COG0429 76 PLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPR-LYHSG-ETEDIRFFLDWLKARFPPRPLYAV 153 (345)
T ss_pred ceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcc-eeccc-chhHHHHHHHHHHHhCCCCceEEE
Confidence 599999999766554 57778899999999999999999998653221 12111 225565555544 56789999
Q ss_pred EEccCHHHHHHHHHhCCc--ceeEEEEeCCCC
Q 025988 100 AKDFGARPAYLFALLHPE--RVSGVITLGVPF 129 (245)
Q Consensus 100 GhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~ 129 (245)
|.|+||.+...+..+..+ .+.+.+.++.|+
T Consensus 154 G~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 154 GFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred EecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 999999555555544332 467777777664
No 98
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.91 E-value=2.1e-09 Score=87.82 Aligned_cols=101 Identities=24% Similarity=0.248 Sum_probs=70.3
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCC-CCCCCCCCC--------CCHHHHHHHHHHHHHHh---C-
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGL-SDPPAEPEK--------ASFKDITNDLLATLDHL---G- 92 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~-s~~~~~~~~--------~~~~~~~~~i~~~l~~l---~- 92 (245)
|.||++|++.+-....+.+++.|++.||.|++||+-+-.. ......... ...+...+++.+.++.+ .
T Consensus 15 ~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~ 94 (218)
T PF01738_consen 15 PAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPE 94 (218)
T ss_dssp EEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTT
T ss_pred CEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccc
Confidence 5899999998887777888999999999999999865444 111100000 01345566776666665 2
Q ss_pred --CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 93 --INKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 93 --~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
.+++.++|+||||.+++.++... +.+++.|..-+
T Consensus 95 ~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 95 VDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp CEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred cCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 35899999999999999998887 56899998776
No 99
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.88 E-value=2.6e-08 Score=79.51 Aligned_cols=88 Identities=19% Similarity=0.266 Sum_probs=68.2
Q ss_pred EEEEcCCCCCccchHH--HHHHHHHCC--cEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q 025988 28 VVFLHGFPEIWYSWRH--QMVAVAAAG--FRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (245)
Q Consensus 28 vl~lHG~~~~~~~~~~--~~~~l~~~g--~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~ 103 (245)
||++|||.+|..+... +.+.+.+.+ ..+.+||++ ...+...+.+.++++....+.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 7999999999888654 344555543 567777776 24566678888999998877899999999
Q ss_pred CHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 104 GARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 104 Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
||..|..+|.+++ +.+ |+++|+..+
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 9999999999886 334 888888654
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.88 E-value=4.9e-08 Score=74.52 Aligned_cols=115 Identities=20% Similarity=0.285 Sum_probs=88.0
Q ss_pred ecCCCCceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 025988 20 ETGTGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGL----SDPPAEPEKASFKDITNDLLATLDHLGI 93 (245)
Q Consensus 20 ~~g~~~~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~----s~~~~~~~~~~~~~~~~~i~~~l~~l~~ 93 (245)
..|+.+.+||+-||.+.+.++ ...++..|+..|+.|.-++++-.-. ..+|+........++...+.++.+.+.-
T Consensus 9 pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~ 88 (213)
T COG3571 9 PAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE 88 (213)
T ss_pred CCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC
Confidence 344445589999999876655 6677888999999999999864322 2234333344556678888888888887
Q ss_pred CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCCCc
Q 025988 94 NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGT 134 (245)
Q Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~~~ 134 (245)
.+.++-||||||.++..++..--..|+++++++=|+.+|+.
T Consensus 89 gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK 129 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK 129 (213)
T ss_pred CceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCC
Confidence 89999999999999998887755559999999998888764
No 101
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.87 E-value=3.1e-08 Score=82.60 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=85.8
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCcEEEEEEccC
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG-INKVFLVAKDFG 104 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~-~~~~~lvGhS~G 104 (245)
|+|.++|+..+....|..+...+... ..|+..+.||++.-..+ ..+++++++...+.|.... ..+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQP----FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccccc----cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 48999999999999999999999876 99999999999874332 3589999999888887774 458999999999
Q ss_pred HHHHHHHHHh---CCcceeEEEEeCCCCC
Q 025988 105 ARPAYLFALL---HPERVSGVITLGVPFI 130 (245)
Q Consensus 105 g~~a~~~a~~---~p~~v~~lv~~~~~~~ 130 (245)
|.+|+.+|.+ .-+.|..+++++++..
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999877 3457999999998866
No 102
>COG0400 Predicted esterase [General function prediction only]
Probab=98.85 E-value=8.5e-09 Score=83.38 Aligned_cols=106 Identities=15% Similarity=0.134 Sum_probs=72.5
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCC--CCCCCC--CCCCCCCC-------HHHHHHHHHHHHHHhCC-
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRG--YGLSDP--PAEPEKAS-------FKDITNDLLATLDHLGI- 93 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G--~G~s~~--~~~~~~~~-------~~~~~~~i~~~l~~l~~- 93 (245)
|+||++||++++..++-+....+.. .++++.+.-+- .|.-.- ..+...++ .+.+++.+.+..++.++
T Consensus 19 ~~iilLHG~Ggde~~~~~~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi~ 97 (207)
T COG0400 19 PLLILLHGLGGDELDLVPLPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGID 97 (207)
T ss_pred cEEEEEecCCCChhhhhhhhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCCC
Confidence 4899999999998888775555544 47777765321 111000 01111222 33344445555556666
Q ss_pred -CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCC
Q 025988 94 -NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP 132 (245)
Q Consensus 94 -~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~ 132 (245)
++++++|+|.||++++.+...+|+.++++|++++.+..+
T Consensus 98 ~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~ 137 (207)
T COG0400 98 SSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLE 137 (207)
T ss_pred hhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCC
Confidence 789999999999999999999999999999998876554
No 103
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.84 E-value=3.6e-08 Score=82.29 Aligned_cols=105 Identities=20% Similarity=0.335 Sum_probs=69.0
Q ss_pred eEEEEcCCCCCccchHHHHHHHH-HCCc--EEEE--eCCCCC----CC----CCCC------CCCCCCCHHHHHHHHHHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVA-AAGF--RAIA--PDYRGY----GL----SDPP------AEPEKASFKDITNDLLAT 87 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~-~~g~--~via--~d~~G~----G~----s~~~------~~~~~~~~~~~~~~i~~~ 87 (245)
|.||+||++++...+..++..+. +.|. .++. ++--|. |. ...| .+....+....++.+..+
T Consensus 13 PTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~~v 92 (255)
T PF06028_consen 13 PTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLKKV 92 (255)
T ss_dssp EEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHHHH
T ss_pred cEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHHHH
Confidence 89999999999999999999997 5542 2333 333221 22 1122 111113567777777777
Q ss_pred HHHh----CCCcEEEEEEccCHHHHHHHHHhCCc-----ceeEEEEeCCCCCC
Q 025988 88 LDHL----GINKVFLVAKDFGARPAYLFALLHPE-----RVSGVITLGVPFIP 131 (245)
Q Consensus 88 l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~~~~ 131 (245)
+..| +++++.+|||||||.++..++..+-. .+..+|.|++|+..
T Consensus 93 l~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 93 LKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 7665 88999999999999999999888532 58999999999864
No 104
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.83 E-value=2.3e-08 Score=78.74 Aligned_cols=89 Identities=19% Similarity=0.340 Sum_probs=62.9
Q ss_pred EEEEcCCCCCc-cchHHHHH-HHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCH
Q 025988 28 VVFLHGFPEIW-YSWRHQMV-AVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (245)
Q Consensus 28 vl~lHG~~~~~-~~~~~~~~-~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg 105 (245)
|+++||+.++. ..|.+..+ .+... ++|-.+++ + ..+.+++.+.+.+.+..+. +++++||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHH
Confidence 68999998764 45877655 45444 78888777 1 2357788888887777654 569999999999
Q ss_pred HHHHHHH-HhCCcceeEEEEeCCCCC
Q 025988 106 RPAYLFA-LLHPERVSGVITLGVPFI 130 (245)
Q Consensus 106 ~~a~~~a-~~~p~~v~~lv~~~~~~~ 130 (245)
..+++++ .....+|.++++++++..
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999999 777889999999998754
No 105
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.81 E-value=4.9e-08 Score=91.77 Aligned_cols=114 Identities=21% Similarity=0.341 Sum_probs=79.2
Q ss_pred CCEEEEEEec---CCC----CceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCC-----CCCC-CCCCCC
Q 025988 12 QGLNLHVAET---GTG----PNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLS-----DPPA-EPEKAS 76 (245)
Q Consensus 12 ~g~~~~~~~~---g~~----~~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s-----~~~~-~~~~~~ 76 (245)
||.+++.... +.+ .|+||++||.|..... +...++.|+.+||.|+.++.||.+.- .... +.....
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~ 453 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD 453 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc
Confidence 6877775432 212 2699999999866555 55667889999999999999975442 1111 222345
Q ss_pred HHHHHHHHHHHHHHhC---CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 77 FKDITNDLLATLDHLG---INKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
.+++.+.+. ++...+ .+++.+.|||.||.+++..+...| ++++.+...+
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~ 505 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAG 505 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccC
Confidence 666666555 555543 348999999999999999988888 5666665544
No 106
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.81 E-value=5e-08 Score=79.70 Aligned_cols=106 Identities=16% Similarity=0.130 Sum_probs=69.3
Q ss_pred CceEEEEcCCCCCccchHHH--HHHHH-HCCcEEEEeCCCCCCCC-------CCCCCCCCCCHHHHHHHHHHHHHHhC--
Q 025988 25 PNVVVFLHGFPEIWYSWRHQ--MVAVA-AAGFRAIAPDYRGYGLS-------DPPAEPEKASFKDITNDLLATLDHLG-- 92 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~--~~~l~-~~g~~via~d~~G~G~s-------~~~~~~~~~~~~~~~~~i~~~l~~l~-- 92 (245)
.|.||+|||.+++...+... ...++ +.||-|+.|+....... .............++.-+..+.++.+
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 35999999999998776542 23344 45899999986421110 00000001122223333444445554
Q ss_pred CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 93 INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.++|++.|+|.||.++..++..+||+|.++.+.++...
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 45899999999999999999999999999988876643
No 107
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.81 E-value=5.9e-09 Score=84.76 Aligned_cols=90 Identities=19% Similarity=0.300 Sum_probs=62.5
Q ss_pred hHHHHHHHHHCCcEEEEeCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHh------CCCcEEEEEEccCHHHHHHHH
Q 025988 41 WRHQMVAVAAAGFRAIAPDYRGYGLSDPP--AEPEKASFKDITNDLLATLDHL------GINKVFLVAKDFGARPAYLFA 112 (245)
Q Consensus 41 ~~~~~~~l~~~g~~via~d~~G~G~s~~~--~~~~~~~~~~~~~~i~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a 112 (245)
|......|+++||.|+.+|.||.+..... .......-....+|+.+.++.+ +.+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44566788899999999999998753221 0000111223456666666554 446899999999999999999
Q ss_pred HhCCcceeEEEEeCCCCC
Q 025988 113 LLHPERVSGVITLGVPFI 130 (245)
Q Consensus 113 ~~~p~~v~~lv~~~~~~~ 130 (245)
..+|++++++|..++...
T Consensus 83 ~~~~~~f~a~v~~~g~~d 100 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSD 100 (213)
T ss_dssp HHTCCGSSEEEEESE-SS
T ss_pred cccceeeeeeeccceecc
Confidence 999999999999887654
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.78 E-value=6.2e-08 Score=81.95 Aligned_cols=101 Identities=16% Similarity=0.155 Sum_probs=69.4
Q ss_pred ceEEEEcCCCCCccc-hHHH---------HHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C
Q 025988 26 NVVVFLHGFPEIWYS-WRHQ---------MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL---G 92 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~-~~~~---------~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l---~ 92 (245)
|+||..|+++..... .... ...+.++||.||..|.||.|.|+...... ..+-++|..++++-+ .
T Consensus 21 P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Qp 97 (272)
T PF02129_consen 21 PVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQP 97 (272)
T ss_dssp EEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHCT
T ss_pred cEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhCC
Confidence 589999999865422 2211 11288899999999999999998754321 344466666666554 2
Q ss_pred C--CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 93 I--NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 93 ~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
. .+|.++|.|++|.+++.+|+..|..+++++...+..
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 2 489999999999999999998888999999876654
No 109
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.73 E-value=8.6e-09 Score=89.38 Aligned_cols=105 Identities=17% Similarity=0.241 Sum_probs=63.8
Q ss_pred CCceEEEEcCCCCCc--cchHH-HHHHHHH---CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------
Q 025988 24 GPNVVVFLHGFPEIW--YSWRH-QMVAVAA---AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL------ 91 (245)
Q Consensus 24 ~~~~vl~lHG~~~~~--~~~~~-~~~~l~~---~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l------ 91 (245)
..|++|++|||.++. ..|-. +...+.+ ..++||++|+...-...-. ......+.+++.+..++..|
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~--~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP--QAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH--HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc--chhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 346999999999887 34544 4454443 3799999998633221000 00112333444444444433
Q ss_pred CCCcEEEEEEccCHHHHHHHHHhCCc--ceeEEEEeCCCCC
Q 025988 92 GINKVFLVAKDFGARPAYLFALLHPE--RVSGVITLGVPFI 130 (245)
Q Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~~ 130 (245)
..+++++||||+||.+|..++..... +|.+|+.++|+.+
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 46789999999999999999988777 8999999998743
No 110
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.71 E-value=6.4e-08 Score=78.94 Aligned_cols=100 Identities=15% Similarity=0.059 Sum_probs=80.7
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCcEEEEEEccC
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD-HLGINKVFLVAKDFG 104 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~-~l~~~~~~lvGhS~G 104 (245)
..++++|=.++++..++.+...|.. -..++++++||.|..-.. ....+++.+++.+...+. -+.-+++.+.|||||
T Consensus 8 ~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~e--p~~~di~~Lad~la~el~~~~~d~P~alfGHSmG 84 (244)
T COG3208 8 LRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGE--PLLTDIESLADELANELLPPLLDAPFALFGHSMG 84 (244)
T ss_pred ceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCC--cccccHHHHHHHHHHHhccccCCCCeeecccchh
Confidence 3799999999999999999888875 499999999999986432 235789999999988888 455578999999999
Q ss_pred HHHHHHHHHhCCc---ceeEEEEeCCC
Q 025988 105 ARPAYLFALLHPE---RVSGVITLGVP 128 (245)
Q Consensus 105 g~~a~~~a~~~p~---~v~~lv~~~~~ 128 (245)
|++|.++|.+... .+.++.+.++.
T Consensus 85 a~lAfEvArrl~~~g~~p~~lfisg~~ 111 (244)
T COG3208 85 AMLAFEVARRLERAGLPPRALFISGCR 111 (244)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEecCC
Confidence 9999999977421 36667666544
No 111
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.65 E-value=1.3e-07 Score=82.51 Aligned_cols=100 Identities=20% Similarity=0.226 Sum_probs=83.5
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcE---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFR---AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~---via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~ 103 (245)
+++++||+..+...|..+...+...|+. ++++++++- .... ......+++..-|.+++...+.+++.++||||
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~---~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~ 136 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTY---SLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSM 136 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCc---cccccHHHHHHHHHHHHhhcCCCceEEEeecc
Confidence 8999999988888999888778777777 888888866 2111 12356777888888888889999999999999
Q ss_pred CHHHHHHHHHhCC--cceeEEEEeCCCCC
Q 025988 104 GARPAYLFALLHP--ERVSGVITLGVPFI 130 (245)
Q Consensus 104 Gg~~a~~~a~~~p--~~v~~lv~~~~~~~ 130 (245)
||.++..++...+ .+|+.++.+++|-.
T Consensus 137 GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 137 GGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 9999999998888 89999999998743
No 112
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.65 E-value=5.7e-07 Score=77.82 Aligned_cols=115 Identities=24% Similarity=0.258 Sum_probs=71.5
Q ss_pred CCEEEEE---Eec-CCCC-ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCC-CC---------------
Q 025988 12 QGLNLHV---AET-GTGP-NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDP-PA--------------- 70 (245)
Q Consensus 12 ~g~~~~~---~~~-g~~~-~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~-~~--------------- 70 (245)
+|.+|+- ... ++++ |.||.+||.++....|...+. ++..||.|+++|.||+|.... ..
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~ 143 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGI 143 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTT
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCc
Confidence 5666653 223 2232 589999999999888876654 667899999999999993221 10
Q ss_pred -C-CCCCCHHHHHHHHHHHHHHh------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 71 -E-PEKASFKDITNDLLATLDHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 71 -~-~~~~~~~~~~~~i~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
+ ...+-...+..|....++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...+.
T Consensus 144 ~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~ 208 (320)
T PF05448_consen 144 DDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPF 208 (320)
T ss_dssp TS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESES
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCC
Confidence 0 11222444556666555544 3468999999999999999999876 59988877654
No 113
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.64 E-value=1.9e-07 Score=81.08 Aligned_cols=101 Identities=21% Similarity=0.310 Sum_probs=60.3
Q ss_pred ceEEEEcCCCCCccc--------------h----HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCC---CCCHHHHHH--
Q 025988 26 NVVVFLHGFPEIWYS--------------W----RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPE---KASFKDITN-- 82 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~--------------~----~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~---~~~~~~~~~-- 82 (245)
|.||++||-++..+. + ..+...|+++||-|+++|.+|+|+........ .++...++.
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~ 195 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNL 195 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHH
T ss_pred CEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHH
Confidence 589999997644321 1 23567899999999999999999986543211 223233322
Q ss_pred -------------HHHHHHHHh------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 83 -------------DLLATLDHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 83 -------------~i~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
|....+|.| +.++|.++|+||||..+|.+|+..+ +|++.|..+.
T Consensus 196 l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~ 258 (390)
T PF12715_consen 196 LMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGY 258 (390)
T ss_dssp HHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-
T ss_pred HHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhh
Confidence 222334444 3468999999999999999999864 6888876543
No 114
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.63 E-value=3.7e-07 Score=76.35 Aligned_cols=122 Identities=24% Similarity=0.272 Sum_probs=81.5
Q ss_pred EEEECCEEEEEE---ecC--CCCceEEEEcCCCCCccchHHHH--HHHH-HCCcEEEEeCCC-------CCCCCCCCCC-
Q 025988 8 YIKVQGLNLHVA---ETG--TGPNVVVFLHGFPEIWYSWRHQM--VAVA-AAGFRAIAPDYR-------GYGLSDPPAE- 71 (245)
Q Consensus 8 ~~~~~g~~~~~~---~~g--~~~~~vl~lHG~~~~~~~~~~~~--~~l~-~~g~~via~d~~-------G~G~s~~~~~- 71 (245)
.+..+|..-+|+ ..+ +++|.||.|||-.++....+... +.|+ +.||-|+.||-- +.+.+..|.+
T Consensus 39 s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 39 SFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred ccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 455566554443 233 44569999999998877655443 3443 348999999632 2222322221
Q ss_pred -CCCCCHHHHHHHHHHHHHHhCCC--cEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 72 -PEKASFKDITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 72 -~~~~~~~~~~~~i~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
........+.+-+..++.+.+++ +|++.|.|-||.++.+++..+|+.+.++..+.+..
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11223444555566666677776 89999999999999999999999999998887654
No 115
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.62 E-value=8.4e-08 Score=77.63 Aligned_cols=97 Identities=25% Similarity=0.323 Sum_probs=60.5
Q ss_pred EEEEcCCC---CCccchHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCCCcEEE
Q 025988 28 VVFLHGFP---EIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-----LGINKVFL 98 (245)
Q Consensus 28 vl~lHG~~---~~~~~~~~~~~~l~~-~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~-----l~~~~~~l 98 (245)
||++||.+ ++......+...+++ .|+.|+.+|.|=. |+......+++..+.+..+++. .+.+++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-----p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-----PEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-----TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-----ccccccccccccccceeeeccccccccccccceEE
Confidence 79999976 333333445555554 7999999999932 2211122233333344444444 34578999
Q ss_pred EEEccCHHHHHHHHHhCCc----ceeEEEEeCCCC
Q 025988 99 VAKDFGARPAYLFALLHPE----RVSGVITLGVPF 129 (245)
Q Consensus 99 vGhS~Gg~~a~~~a~~~p~----~v~~lv~~~~~~ 129 (245)
+|+|.||.+++.++....+ .+++++++++..
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999998876433 489999999864
No 116
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.62 E-value=5e-08 Score=86.25 Aligned_cols=106 Identities=21% Similarity=0.229 Sum_probs=60.6
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCC-C-C--C------C-------C-----CCCC------C
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLS-D-P--P------A-------E-----PEKA------S 76 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s-~-~--~------~-------~-----~~~~------~ 76 (245)
-|+|||-||++++...+..+...|+.+||-|+++|.|..-.. . . . . + .... .
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 369999999999999999999999999999999999953211 0 0 0 0 0 0000 0
Q ss_pred -----HHHHHHHHHHHHHHh--------------------------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEe
Q 025988 77 -----FKDITNDLLATLDHL--------------------------GINKVFLVAKDFGARPAYLFALLHPERVSGVITL 125 (245)
Q Consensus 77 -----~~~~~~~i~~~l~~l--------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~ 125 (245)
++.-+.++..+++.+ +.++++++|||+||..+...+... .+++..|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 011122333333222 245799999999999999877776 679999999
Q ss_pred CCCCCC
Q 025988 126 GVPFIP 131 (245)
Q Consensus 126 ~~~~~~ 131 (245)
++...|
T Consensus 259 D~W~~P 264 (379)
T PF03403_consen 259 DPWMFP 264 (379)
T ss_dssp S---TT
T ss_pred CCcccC
Confidence 987654
No 117
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.55 E-value=6.4e-07 Score=73.35 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=50.9
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHC--CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHhCC--CcEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAA--GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDL----LATLDHLGI--NKVF 97 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~--g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i----~~~l~~l~~--~~~~ 97 (245)
..|||+||+.++...|+.+...+... .+.-..+...++..... ....+++.+++.+ .+.++.... .+++
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~---~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF---KTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc---ccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 48999999999999998887777651 12211222222221111 1123455555444 444433333 4899
Q ss_pred EEEEccCHHHHHHHHH
Q 025988 98 LVAKDFGARPAYLFAL 113 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~ 113 (245)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999865444
No 118
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.55 E-value=1.5e-06 Score=68.41 Aligned_cols=103 Identities=21% Similarity=0.287 Sum_probs=68.7
Q ss_pred CceEEEEcCCCC---Cc--cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--cEE
Q 025988 25 PNVVVFLHGFPE---IW--YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN--KVF 97 (245)
Q Consensus 25 ~~~vl~lHG~~~---~~--~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~--~~~ 97 (245)
.|..|++|--|. +. ..-..+...|.+.||.++-+|+||-|.|...-+...-..++ +....+.+.....+ ...
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~D-a~aaldW~~~~hp~s~~~~ 106 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELED-AAAALDWLQARHPDSASCW 106 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHH-HHHHHHHHHhhCCCchhhh
Confidence 448899997653 22 22445667888999999999999999998764422212222 22333344443322 236
Q ss_pred EEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 98 LVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.|+|+|+.|++.+|.+.|+ ....+.+.++.
T Consensus 107 l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~ 137 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE-ILVFISILPPI 137 (210)
T ss_pred hcccchHHHHHHHHHHhccc-ccceeeccCCC
Confidence 89999999999999999987 55555555543
No 119
>PRK10115 protease 2; Provisional
Probab=98.55 E-value=1.1e-06 Score=83.58 Aligned_cols=117 Identities=17% Similarity=0.112 Sum_probs=82.7
Q ss_pred CCEEEEE-E---ec---CCCCceEEEEcCCCCCcc--chHHHHHHHHHCCcEEEEeCCCCCCCCCCC---C---CCCCCC
Q 025988 12 QGLNLHV-A---ET---GTGPNVVVFLHGFPEIWY--SWRHQMVAVAAAGFRAIAPDYRGYGLSDPP---A---EPEKAS 76 (245)
Q Consensus 12 ~g~~~~~-~---~~---g~~~~~vl~lHG~~~~~~--~~~~~~~~l~~~g~~via~d~~G~G~s~~~---~---~~~~~~ 76 (245)
||.+|.+ . .. ....|+||++||.++... .|......|.++||.|+.++.||-|.-... . .....+
T Consensus 425 DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~ 504 (686)
T PRK10115 425 DGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNT 504 (686)
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCc
Confidence 8888774 1 11 122359999999887664 366667788889999999999986554321 0 111234
Q ss_pred HHHHHHHHHHHHHHh--CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 77 FKDITNDLLATLDHL--GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
+++++..+..+++.= ..+++.+.|.|.||.++..++..+|++++++|+..+.
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 555555555554431 3568999999999999999999999999999987654
No 120
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.53 E-value=2.2e-06 Score=69.96 Aligned_cols=118 Identities=27% Similarity=0.290 Sum_probs=75.0
Q ss_pred eEEEE-CCEEEEEEecCC------CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCC-CCCCCCCCCCCCCHH
Q 025988 7 KYIKV-QGLNLHVAETGT------GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGY-GLSDPPAEPEKASFK 78 (245)
Q Consensus 7 ~~~~~-~g~~~~~~~~g~------~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~-G~s~~~~~~~~~~~~ 78 (245)
+.+.+ +|..|++.+.-+ ..++||+..||+.....+..++.+|+.+||+|+-+|-.-| |.|+... .++++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchH
Confidence 45666 788888865431 2249999999999999999999999999999999997765 7787654 368898
Q ss_pred HHHHHHHHHHHHh---CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 79 DITNDLLATLDHL---GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 79 ~~~~~i~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
...+++..+++.+ |..++.+|.-|..|.+|+..|++- .+.-+|..-+.
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGV 133 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGV 133 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeee
Confidence 8888888777665 888999999999999999999853 37777765543
No 121
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.52 E-value=9.1e-07 Score=70.66 Aligned_cols=95 Identities=16% Similarity=0.061 Sum_probs=71.8
Q ss_pred EEcCCC--CCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCcEEEEEEccCHH
Q 025988 30 FLHGFP--EIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-LGINKVFLVAKDFGAR 106 (245)
Q Consensus 30 ~lHG~~--~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~-l~~~~~~lvGhS~Gg~ 106 (245)
++|+.+ ++...|..+...+.. .+.|+++|++|++.+... ..+.+.+++.+...+.. ....+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPL----PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCC----CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 455543 667779999988875 599999999999876543 24677777766655543 4567899999999999
Q ss_pred HHHHHHHh---CCcceeEEEEeCCCC
Q 025988 107 PAYLFALL---HPERVSGVITLGVPF 129 (245)
Q Consensus 107 ~a~~~a~~---~p~~v~~lv~~~~~~ 129 (245)
++..++.. .++.+.++++++...
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 99998876 456789998887643
No 122
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.50 E-value=1.1e-06 Score=69.48 Aligned_cols=96 Identities=24% Similarity=0.265 Sum_probs=76.7
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEEEc
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVFLVAKD 102 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l----~~~~~~lvGhS 102 (245)
.+||+.|=++-...=+.++..|+++|+.|+.+|-+-|=.+. .+.++.+.|+..+++.+ +.++++|||+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE-------RTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh-------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 57888887665555566788999999999999988766653 35667788888887665 78899999999
Q ss_pred cCHHHHHHHHHhCCc----ceeEEEEeCCCC
Q 025988 103 FGARPAYLFALLHPE----RVSGVITLGVPF 129 (245)
Q Consensus 103 ~Gg~~a~~~a~~~p~----~v~~lv~~~~~~ 129 (245)
+|+-+.-....+.|. +|+.++++++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 999888877777774 799999998763
No 123
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.48 E-value=1.4e-06 Score=77.16 Aligned_cols=102 Identities=16% Similarity=0.215 Sum_probs=82.2
Q ss_pred ceEEEEcCCCCCccc-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccC
Q 025988 26 NVVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~-~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~G 104 (245)
|+||++--+.+.... -+.+++.|.+ |+.|+..|..--+.... .....+++++++-+.++++++|.+ ++++|.|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~--~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL--SAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch--hcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 489999988765544 4678888988 99999999986554322 223679999999999999999987 999999999
Q ss_pred HHHHHHHHHhC-----CcceeEEEEeCCCCCC
Q 025988 105 ARPAYLFALLH-----PERVSGVITLGVPFIP 131 (245)
Q Consensus 105 g~~a~~~a~~~-----p~~v~~lv~~~~~~~~ 131 (245)
|..++.+++.. |++++.++++++|...
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 99977666554 6789999999998764
No 124
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.45 E-value=2.8e-06 Score=77.11 Aligned_cols=104 Identities=16% Similarity=0.152 Sum_probs=73.8
Q ss_pred CceEEEEcCCCCCccchHHHH------------------HHHHHCCcEEEEeCCC-CCCCCCCCCCCCCCCHHHHHHHHH
Q 025988 25 PNVVVFLHGFPEIWYSWRHQM------------------VAVAAAGFRAIAPDYR-GYGLSDPPAEPEKASFKDITNDLL 85 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~------------------~~l~~~g~~via~d~~-G~G~s~~~~~~~~~~~~~~~~~i~ 85 (245)
.|+||+++|.|+++..+-.+. ..+.+ -.+++.+|.| |+|.|.........+.++.++|+.
T Consensus 77 ~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~ 155 (462)
T PTZ00472 77 APVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMY 155 (462)
T ss_pred CCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHH
Confidence 359999999999876652221 01222 3789999975 888886543323456688899999
Q ss_pred HHHHHh-------CCCcEEEEEEccCHHHHHHHHHhC----------CcceeEEEEeCCCC
Q 025988 86 ATLDHL-------GINKVFLVAKDFGARPAYLFALLH----------PERVSGVITLGVPF 129 (245)
Q Consensus 86 ~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~----------p~~v~~lv~~~~~~ 129 (245)
++++.+ +..+++|+|||+||.++..+|.+- +-.++++++.++-.
T Consensus 156 ~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 156 NFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 998753 457899999999999998887662 12478888776543
No 125
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.44 E-value=1.2e-06 Score=72.46 Aligned_cols=103 Identities=20% Similarity=0.217 Sum_probs=65.2
Q ss_pred ceEEEEcCCCCCccchHHH-HHHHHHCCc--EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEE
Q 025988 26 NVVVFLHGFPEIWYSWRHQ-MVAVAAAGF--RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVFL 98 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~-~~~l~~~g~--~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l----~~~~~~l 98 (245)
..+||+|||..+.+.-... .+.....++ .++.+.+|+.|.-..-. ....+...-...+..+++.| +.++|++
T Consensus 19 ~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~-~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~i 97 (233)
T PF05990_consen 19 EVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYF-YDRESARFSGPALARFLRDLARAPGIKRIHI 97 (233)
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhh-hhhhhHHHHHHHHHHHHHHHHhccCCceEEE
Confidence 3999999999876653222 222222233 79999999887632110 01122333344555555544 6789999
Q ss_pred EEEccCHHHHHHHHHh----CC-----cceeEEEEeCCCC
Q 025988 99 VAKDFGARPAYLFALL----HP-----ERVSGVITLGVPF 129 (245)
Q Consensus 99 vGhS~Gg~~a~~~a~~----~p-----~~v~~lv~~~~~~ 129 (245)
++||||+.+.+..... .+ .++..+|+++|-+
T Consensus 98 laHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 98 LAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999876544 22 2678888887654
No 126
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.42 E-value=9.7e-07 Score=71.40 Aligned_cols=111 Identities=25% Similarity=0.345 Sum_probs=76.4
Q ss_pred CCEEEEEEecC---CCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCC-CCCCCCHHHHHH-HHHH
Q 025988 12 QGLNLHVAETG---TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPA-EPEKASFKDITN-DLLA 86 (245)
Q Consensus 12 ~g~~~~~~~~g---~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~-~~~~~~~~~~~~-~i~~ 86 (245)
||..+...... +.+..|+.--+++--...+++++..+++.||.|+..|+||.|.|+... ....+...+++. |+.+
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~a 93 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPA 93 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHH
Confidence 66665543332 222145555556666677899999999999999999999999997653 223567777776 7777
Q ss_pred HHHHh----CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEE
Q 025988 87 TLDHL----GINKVFLVAKDFGARPAYLFALLHPERVSGVIT 124 (245)
Q Consensus 87 ~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 124 (245)
.++.+ ...+..+||||+||.+.-. +..+| +..+...
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL-~~~~~-k~~a~~v 133 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGL-LGQHP-KYAAFAV 133 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeecc-cccCc-ccceeeE
Confidence 76655 4467899999999998754 44555 3444433
No 127
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.37 E-value=2e-06 Score=73.29 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=72.3
Q ss_pred CCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhC--CCcEEEE
Q 025988 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT-LDHLG--INKVFLV 99 (245)
Q Consensus 23 ~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~-l~~l~--~~~~~lv 99 (245)
+|+..||++-|..+-.+.- ++..-.+.||.|+.+++||++.|...+- ..+....++.+.++ +..|+ .+.+++.
T Consensus 241 ngq~LvIC~EGNAGFYEvG--~m~tP~~lgYsvLGwNhPGFagSTG~P~--p~n~~nA~DaVvQfAI~~Lgf~~edIily 316 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEVG--VMNTPAQLGYSVLGWNHPGFAGSTGLPY--PVNTLNAADAVVQFAIQVLGFRQEDIILY 316 (517)
T ss_pred CCceEEEEecCCccceEee--eecChHHhCceeeccCCCCccccCCCCC--cccchHHHHHHHHHHHHHcCCCccceEEE
Confidence 5566899999987765542 2333345699999999999999987543 23333445555544 35565 4579999
Q ss_pred EEccCHHHHHHHHHhCCcceeEEEEeC
Q 025988 100 AKDFGARPAYLFALLHPERVSGVITLG 126 (245)
Q Consensus 100 GhS~Gg~~a~~~a~~~p~~v~~lv~~~ 126 (245)
|+|.||.-+..+|..+|+ |+++|+=.
T Consensus 317 gWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 317 GWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred EeecCCchHHHHhhcCCC-ceEEEeec
Confidence 999999999999999998 89888643
No 128
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.36 E-value=1.1e-05 Score=68.99 Aligned_cols=114 Identities=16% Similarity=0.167 Sum_probs=77.7
Q ss_pred EEEECCEEEEEEec-----CCCCceEEEEcCCCCCccch-------HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCC
Q 025988 8 YIKVQGLNLHVAET-----GTGPNVVVFLHGFPEIWYSW-------RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKA 75 (245)
Q Consensus 8 ~~~~~g~~~~~~~~-----g~~~~~vl~lHG~~~~~~~~-------~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~ 75 (245)
.++.|++.+....- .+++ .||++-|.++..+.- ..+.....+.+-+|+.+++||.|.|..+.
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~R-WiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----- 189 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQR-WILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----- 189 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCc-EEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----
Confidence 34557776554322 2444 899999998876661 12222333457999999999999997653
Q ss_pred CHHHHHHHHHHHHHHh-------CCCcEEEEEEccCHHHHHHHHHhCC----cceeEEEEeCC
Q 025988 76 SFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALLHP----ERVSGVITLGV 127 (245)
Q Consensus 76 ~~~~~~~~i~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lv~~~~ 127 (245)
+.+++++|-.+.++.| +.+++++-|||+||.++...+.++. +-++=+++-+-
T Consensus 190 s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDR 252 (365)
T PF05677_consen 190 SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDR 252 (365)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecC
Confidence 4688888877777665 2368999999999999887665543 23454555543
No 129
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.34 E-value=1.9e-06 Score=74.47 Aligned_cols=92 Identities=25% Similarity=0.270 Sum_probs=66.0
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCC---C---CHHHHHHHHHHHHHH---------
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEK---A---SFKDITNDLLATLDH--------- 90 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~---~---~~~~~~~~i~~~l~~--------- 90 (245)
|.|++-||.+++-..+..+.+.+++.||-|.++|.+|--....+..... + .+.+-..|+..+|+.
T Consensus 72 PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~ 151 (365)
T COG4188 72 PLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPA 151 (365)
T ss_pred CeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcc
Confidence 5899999999999999999999999999999999999433322211101 1 122333444444433
Q ss_pred ----hCCCcEEEEEEccCHHHHHHHHHhCCc
Q 025988 91 ----LGINKVFLVAKDFGARPAYLFALLHPE 117 (245)
Q Consensus 91 ----l~~~~~~lvGhS~Gg~~a~~~a~~~p~ 117 (245)
++..+|.++|||+||..++.++..+.+
T Consensus 152 l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 152 LAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccccCccceEEEecccccHHHHHhcccccc
Confidence 345689999999999999998766543
No 130
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.31 E-value=6.5e-06 Score=67.46 Aligned_cols=104 Identities=20% Similarity=0.197 Sum_probs=72.7
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCC-----cEEEEeCCCCC----CCCCCCC---------CCCCCCHHHHHHHHHHHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAG-----FRAIAPDYRGY----GLSDPPA---------EPEKASFKDITNDLLATL 88 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g-----~~via~d~~G~----G~s~~~~---------~~~~~~~~~~~~~i~~~l 88 (245)
|.||+||+++++.+...++..|...+ --++.+|--|- |.-++.. +....+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 79999999999999999999998752 12455665551 1111110 111234444455554444
Q ss_pred ----HHhCCCcEEEEEEccCHHHHHHHHHhCCc-----ceeEEEEeCCCCC
Q 025988 89 ----DHLGINKVFLVAKDFGARPAYLFALLHPE-----RVSGVITLGVPFI 130 (245)
Q Consensus 89 ----~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~~~ 130 (245)
++.+++++.+|||||||....+++..+-. .+..+|.+++++-
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 45589999999999999999998887532 4899999999886
No 131
>PRK04940 hypothetical protein; Provisional
Probab=98.30 E-value=5.3e-06 Score=65.33 Aligned_cols=86 Identities=17% Similarity=0.270 Sum_probs=52.7
Q ss_pred EEEEcCCCCCccc--hHHHH-HHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C-CCcEEEEE
Q 025988 28 VVFLHGFPEIWYS--WRHQM-VAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL---G-INKVFLVA 100 (245)
Q Consensus 28 vl~lHG~~~~~~~--~~~~~-~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l---~-~~~~~lvG 100 (245)
||++|||.+|..+ ..... ..+ ....+++ +++ ....++-++.+.++++.+ + .+++.|||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~------------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liG 66 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS------------TLHPKHDMQHLLKEVDKMLQLSDDERPLICG 66 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC------------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEE
Confidence 7899999999888 43221 111 1123333 221 012233333444444432 1 25799999
Q ss_pred EccCHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 101 KDFGARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 101 hS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
+|+||..|..++.++. + ..|+++|...|
T Consensus 67 SSLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 67 VGLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred eChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 9999999999999985 3 45778888755
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.29 E-value=7.9e-06 Score=70.39 Aligned_cols=101 Identities=21% Similarity=0.183 Sum_probs=67.5
Q ss_pred CceEEEEcCCC---CCccch-HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC--CCc
Q 025988 25 PNVVVFLHGFP---EIWYSW-RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH---LG--INK 95 (245)
Q Consensus 25 ~~~vl~lHG~~---~~~~~~-~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~---l~--~~~ 95 (245)
.|+||++||.+ ++.... ..+...+...|+.|+++|+|---+- .....+++..+.+..+.++ ++ .++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-----~~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-----PFPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----CCCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 35999999975 333333 4455566677999999999943322 2233455544444444433 33 568
Q ss_pred EEEEEEccCHHHHHHHHHhCCc----ceeEEEEeCCCCC
Q 025988 96 VFLVAKDFGARPAYLFALLHPE----RVSGVITLGVPFI 130 (245)
Q Consensus 96 ~~lvGhS~Gg~~a~~~a~~~p~----~v~~lv~~~~~~~ 130 (245)
+.++|+|.||.+++.++....+ ...+.+++.+...
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 9999999999999998877543 4677788876643
No 133
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.27 E-value=7.4e-07 Score=73.65 Aligned_cols=99 Identities=22% Similarity=0.333 Sum_probs=71.2
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCC----CC-C--------------CCCCCHHHHHHHHHH
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDP----PA-E--------------PEKASFKDITNDLLA 86 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~----~~-~--------------~~~~~~~~~~~~i~~ 86 (245)
|.||-.||++++...|..+...- ..||.|+..|.||.|.|.. ++ + ...|-....-.|+..
T Consensus 84 P~vV~fhGY~g~~g~~~~~l~wa-~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ 162 (321)
T COG3458 84 PAVVQFHGYGGRGGEWHDMLHWA-VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVR 162 (321)
T ss_pred ceEEEEeeccCCCCCcccccccc-ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHH
Confidence 48999999999998898876544 4699999999999998833 11 1 111222233344444
Q ss_pred HHHHh------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeC
Q 025988 87 TLDHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (245)
Q Consensus 87 ~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 126 (245)
+++.+ +.+++.+.|.|.||.+++..++..| ++++++..=
T Consensus 163 ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~ 207 (321)
T COG3458 163 AVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADY 207 (321)
T ss_pred HHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccc
Confidence 44333 5679999999999999998888776 588887653
No 134
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.24 E-value=1.2e-05 Score=71.44 Aligned_cols=109 Identities=22% Similarity=0.378 Sum_probs=70.0
Q ss_pred CCEEEEEEecCCCCceEEEEc-CCCCCccchHHHHHHHHHCCcEE----E-E-eCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 025988 12 QGLNLHVAETGTGPNVVVFLH-GFPEIWYSWRHQMVAVAAAGFRA----I-A-PDYRGYGLSDPPAEPEKASFKDITNDL 84 (245)
Q Consensus 12 ~g~~~~~~~~g~~~~~vl~lH-G~~~~~~~~~~~~~~l~~~g~~v----i-a-~d~~G~G~s~~~~~~~~~~~~~~~~~i 84 (245)
+|+.+.+...|+-. .|-.+- .+......|..+++.|.+.||.. . + +|.|- .+. ..++....+
T Consensus 38 ~gv~i~~~~~g~~~-~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~-----~~~-----~~~~~~~~l 106 (389)
T PF02450_consen 38 PGVEIRVPGFGGTS-GIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRL-----SPA-----ERDEYFTKL 106 (389)
T ss_pred CCceeecCCCCcee-eeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhh-----chh-----hHHHHHHHH
Confidence 55656554444222 333332 22222237999999999877763 2 3 57771 111 233445555
Q ss_pred HHHHHHh---CCCcEEEEEEccCHHHHHHHHHhCCc------ceeEEEEeCCCCCC
Q 025988 85 LATLDHL---GINKVFLVAKDFGARPAYLFALLHPE------RVSGVITLGVPFIP 131 (245)
Q Consensus 85 ~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~lv~~~~~~~~ 131 (245)
..+++.. ..++++||||||||.++..+....+. .|+++|.+++|+..
T Consensus 107 k~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 107 KQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 5555443 36899999999999999998888743 59999999999764
No 135
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.23 E-value=2.5e-06 Score=74.71 Aligned_cols=106 Identities=11% Similarity=0.136 Sum_probs=81.6
Q ss_pred CceEEEEcCCCCCccch-----HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 025988 25 PNVVVFLHGFPEIWYSW-----RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~-----~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lv 99 (245)
+.|+|++|-+--..+.| +.++..|.++|..|+.++.++=..+....+.++|-.+.+.+.+..+.+..+.+++.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 34899999997766665 3578888899999999999875555443332333334444556666677799999999
Q ss_pred EEccCHHHHHHHHHhCCcc-eeEEEEeCCCCC
Q 025988 100 AKDFGARPAYLFALLHPER-VSGVITLGVPFI 130 (245)
Q Consensus 100 GhS~Gg~~a~~~a~~~p~~-v~~lv~~~~~~~ 130 (245)
|||.||+++..+++.++.+ |+.++++.++..
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 9999999999999998887 999999887754
No 136
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.22 E-value=1.2e-05 Score=71.93 Aligned_cols=102 Identities=16% Similarity=0.192 Sum_probs=65.8
Q ss_pred CceEEEEcCCCC--CccchHHHHHHHHHCC----cEEEEeCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHh-----
Q 025988 25 PNVVVFLHGFPE--IWYSWRHQMVAVAAAG----FRAIAPDYRGYGLSDPPAEP--EKASFKDITNDLLATLDHL----- 91 (245)
Q Consensus 25 ~~~vl~lHG~~~--~~~~~~~~~~~l~~~g----~~via~d~~G~G~s~~~~~~--~~~~~~~~~~~i~~~l~~l----- 91 (245)
.|+|+++||-.- ... ....++.|...| ..|+.+|..+.. ....+. ...-.+.+++++.-.+++.
T Consensus 209 ~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 209 RPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQELPCNADFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCcc--cccccCCchHHHHHHHHHHHHHHHHHhCCCCC
Confidence 358999999542 211 223455555555 346778763211 111111 0111334566776767654
Q ss_pred CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 92 GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+.++.+|+|+||||..|+.++.++|+++.+++.+++.+
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 34578999999999999999999999999999999875
No 137
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.20 E-value=2e-06 Score=71.45 Aligned_cols=52 Identities=19% Similarity=0.318 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHh-CCC--cEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 79 DITNDLLATLDHL-GIN--KVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 79 ~~~~~i~~~l~~l-~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
-+.++|...++.- ... +..|+|+||||..|+.++.+||+.+.+++++++.+.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 3555677776553 322 279999999999999999999999999999997643
No 138
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.18 E-value=1.5e-05 Score=66.91 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=61.6
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCC-------------CCCCCCCCCCCCHHHHHHHHH-HHHHHh
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYG-------------LSDPPAEPEKASFKDITNDLL-ATLDHL 91 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G-------------~s~~~~~~~~~~~~~~~~~i~-~~l~~l 91 (245)
|.|||+||.++....-+.+ +.. |.-.++.+.+-++ .++... .. -.....+-+. .+.++.
T Consensus 192 PLvlfLHgagq~g~dn~~~---l~s-g~gaiawa~pedqcfVlAPQy~~if~d~e~~t--~~-~l~~~idli~~vlas~y 264 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKV---LSS-GIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT--LL-YLIEKIDLILEVLASTY 264 (387)
T ss_pred cEEEEEecCCCCCchhhhh---hhc-CccceeeecccCceEEEccccccccccccccc--ch-hHHHHHHHHHHHHhhcc
Confidence 6999999999876664432 221 3334444444333 122100 01 1222233333 223444
Q ss_pred CC--CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 92 GI--NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 92 ~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
++ +++.++|.|+||.-+|.++.++|+.+++.+.+++...
T Consensus 265 nID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 265 NIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred CcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 55 4799999999999999999999999999999988754
No 139
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.18 E-value=2.9e-05 Score=60.39 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=65.7
Q ss_pred eEEEEcCCCCCccc-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCH
Q 025988 27 VVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (245)
Q Consensus 27 ~vl~lHG~~~~~~~-~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg 105 (245)
.+|++||+.+|... |+..-+ ++--.+-.+++. +......+++++.+...+... -++++||+||+|+
T Consensus 4 ~~lIVpG~~~Sg~~HWq~~we---~~l~~a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc 70 (181)
T COG3545 4 DVLIVPGYGGSGPNHWQSRWE---SALPNARRVEQD---------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGC 70 (181)
T ss_pred eEEEecCCCCCChhHHHHHHH---hhCccchhcccC---------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccH
Confidence 69999999877654 665432 221112222222 223457888888888888877 3569999999999
Q ss_pred HHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 106 RPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 106 ~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.++..++......|.|+++++++..
T Consensus 71 ~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 71 ATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred HHHHHHHHhhhhccceEEEecCCCc
Confidence 9999999887778999999998854
No 140
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.12 E-value=5e-05 Score=65.93 Aligned_cols=103 Identities=22% Similarity=0.228 Sum_probs=73.1
Q ss_pred CceEEEEcCCCC-----CccchHHHHHHH-HHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------hC
Q 025988 25 PNVVVFLHGFPE-----IWYSWRHQMVAV-AAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH------LG 92 (245)
Q Consensus 25 ~~~vl~lHG~~~-----~~~~~~~~~~~l-~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~------l~ 92 (245)
.|.||++||.+- ....++.+...+ .+.+..|+++|+|= .|+.......++-.+.+..++++ .+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-----APEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-----APEHPFPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-----CCCCCCCccchHHHHHHHHHHHhHHHHhCCC
Confidence 358999999862 244566776666 45588999999993 33333333455555555555554 26
Q ss_pred CCcEEEEEEccCHHHHHHHHHhC------CcceeEEEEeCCCCCCC
Q 025988 93 INKVFLVAKDFGARPAYLFALLH------PERVSGVITLGVPFIPP 132 (245)
Q Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lv~~~~~~~~~ 132 (245)
.++++|+|-|.||.+|..+|.+. +.++++.|++-|.+...
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 67899999999999999888663 35799999998876543
No 141
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.11 E-value=0.0003 Score=60.72 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=70.6
Q ss_pred eEEEEcCCCCCcc---chHHHHHHHHHCCcEEEEeCCCCCCCC--C--------------CCCCCCC-------------
Q 025988 27 VVVFLHGFPEIWY---SWRHQMVAVAAAGFRAIAPDYRGYGLS--D--------------PPAEPEK------------- 74 (245)
Q Consensus 27 ~vl~lHG~~~~~~---~~~~~~~~l~~~g~~via~d~~G~G~s--~--------------~~~~~~~------------- 74 (245)
.||+|||++.+.. ...++-..|.+.|+.++++.+|.--.. . .......
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 8999999998764 345566778889999999988861100 0 0000000
Q ss_pred --CCHHHHHHHHHHHH---HHhCCCcEEEEEEccCHHHHHHHHHhCCc-ceeEEEEeCCCCCCC
Q 025988 75 --ASFKDITNDLLATL---DHLGINKVFLVAKDFGARPAYLFALLHPE-RVSGVITLGVPFIPP 132 (245)
Q Consensus 75 --~~~~~~~~~i~~~l---~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lv~~~~~~~~~ 132 (245)
...+.+...|.+.+ ...+.++++||||+.|+..+.++.+..+. .++++|+|++.....
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQP 232 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcc
Confidence 00122333333333 33466779999999999999999988765 589999999765443
No 142
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.09 E-value=0.00012 Score=60.00 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=90.1
Q ss_pred ceeEEEECCEEEEEEecC-------CCCceEEEEcCCCCCccchHHHHHHHHHC---CcEEEEeCCCCCCCCC---C--C
Q 025988 5 EHKYIKVQGLNLHVAETG-------TGPNVVVFLHGFPEIWYSWRHQMVAVAAA---GFRAIAPDYRGYGLSD---P--P 69 (245)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g-------~~~~~vl~lHG~~~~~~~~~~~~~~l~~~---g~~via~d~~G~G~s~---~--~ 69 (245)
+.++++.+|..++....+ ...+.++++.|.|+....+.+++..|..+ ..+|+.+...||-.-. + +
T Consensus 2 ~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 2 TEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 445666666665543322 33448999999999999999888877643 2558888888876533 1 1
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEEEccCHHHHHHHHHhCCc--ceeEEEEeCCCC
Q 025988 70 --AEPEKASFKDITNDLLATLDHL--GINKVFLVAKDFGARPAYLFALLHPE--RVSGVITLGVPF 129 (245)
Q Consensus 70 --~~~~~~~~~~~~~~i~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~ 129 (245)
...+.++++++++.-.++++.. ...+++++|||.|+.+.+++.-...+ .|.+.+++-|..
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 1224688999999999999887 34689999999999999998874322 688888876554
No 143
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.08 E-value=2.2e-05 Score=75.47 Aligned_cols=82 Identities=17% Similarity=0.075 Sum_probs=63.7
Q ss_pred HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CCcEEEEEEcc
Q 025988 44 QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG--------------------INKVFLVAKDF 103 (245)
Q Consensus 44 ~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~--------------------~~~~~lvGhS~ 103 (245)
..+.|..+||.|+..|.||.|.|+.-.. .++ .+-.+|..++++-+. ..+|.++|.|+
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 4567888999999999999999987532 122 233556555555553 46899999999
Q ss_pred CHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 104 GARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 104 Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
||.+++.+|...|+.++++|..++.
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCC
Confidence 9999999999999899999987543
No 144
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.06 E-value=0.00012 Score=62.26 Aligned_cols=108 Identities=17% Similarity=0.292 Sum_probs=66.0
Q ss_pred EEEEEEecCC-CCceEEEEcCCCCCcc---chHHHHHHHHHCCcEEEEeCCC----CCCCCCCCCCCCCCCHHHHHHHHH
Q 025988 14 LNLHVAETGT-GPNVVVFLHGFPEIWY---SWRHQMVAVAAAGFRAIAPDYR----GYGLSDPPAEPEKASFKDITNDLL 85 (245)
Q Consensus 14 ~~~~~~~~g~-~~~~vl~lHG~~~~~~---~~~~~~~~l~~~g~~via~d~~----G~G~s~~~~~~~~~~~~~~~~~i~ 85 (245)
..+.|...+. .+..|||+-|.++.-. ....+++.|...+|.|+-+-++ |+|.+ ++++=++||.
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI~ 91 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEIA 91 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHH
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHHH
Confidence 3444444442 2338999999986444 3667788887779999999876 44433 4555567777
Q ss_pred HHHHHh--------CCCcEEEEEEccCHHHHHHHHHhCC-----cceeEEEEeCCCCC
Q 025988 86 ATLDHL--------GINKVFLVAKDFGARPAYLFALLHP-----ERVSGVITLGVPFI 130 (245)
Q Consensus 86 ~~l~~l--------~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lv~~~~~~~ 130 (245)
++++.| +.++|+|+|||-|+.-+++++.... ..|++.|+-+|...
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 666644 3578999999999999999987752 57999999887643
No 145
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.01 E-value=2e-05 Score=66.49 Aligned_cols=108 Identities=19% Similarity=0.246 Sum_probs=71.7
Q ss_pred CCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCC------CCCCC---------------CC-C--CHHH
Q 025988 24 GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSD------PPAEP---------------EK-A--SFKD 79 (245)
Q Consensus 24 ~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~------~~~~~---------------~~-~--~~~~ 79 (245)
+-|.|||-||.+++...+....-.|+.+||-|.|+..|.+.... ++.+. +. . .-++
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 33699999999999999999999999999999999999654431 11000 00 0 0011
Q ss_pred HH---H---HHHHHHHHh------------------------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 80 IT---N---DLLATLDHL------------------------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 80 ~~---~---~i~~~l~~l------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
+. + -...+++.+ .-.++.++|||+||..+....+.+.+ ++..|++++-.
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeeeee
Confidence 11 1 111222221 22468999999999999887777665 78888888765
Q ss_pred CCC
Q 025988 130 IPP 132 (245)
Q Consensus 130 ~~~ 132 (245)
.|-
T Consensus 276 ~Pl 278 (399)
T KOG3847|consen 276 FPL 278 (399)
T ss_pred ccc
Confidence 543
No 146
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.98 E-value=7e-05 Score=70.12 Aligned_cols=100 Identities=21% Similarity=0.221 Sum_probs=63.1
Q ss_pred eEEEEcCCCCCccchHHHHHHHHH----------------CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAA----------------AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH 90 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~----------------~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 90 (245)
||||+.|..||...-|.++..... ..|+.++.|+-+ .-......++.++++-+.+.++.
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dAIk~ 165 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDAIKY 165 (973)
T ss_pred eEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHHHHH
Confidence 899999999998888877654431 135666666643 00111234556666655554433
Q ss_pred h-----C--------CCcEEEEEEccCHHHHHHHHHh---CCcceeEEEEeCCCCCC
Q 025988 91 L-----G--------INKVFLVAKDFGARPAYLFALL---HPERVSGVITLGVPFIP 131 (245)
Q Consensus 91 l-----~--------~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lv~~~~~~~~ 131 (245)
+ + .+.|++|||||||.+|..++.. .++.|.-++..+.|...
T Consensus 166 ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 166 ILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 2 2 3459999999999999765543 24456667777766543
No 147
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.98 E-value=3.4e-05 Score=61.56 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=63.8
Q ss_pred ceEEEEcCCC---CCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHh-CCCcEE
Q 025988 26 NVVVFLHGFP---EIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL----DHL-GINKVF 97 (245)
Q Consensus 26 ~~vl~lHG~~---~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l----~~l-~~~~~~ 97 (245)
+..||+||.- ++...--..+..+.+.||+|...+ |+.+.. ..++++.+.++...+ +.. ..+.+.
T Consensus 68 klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q-----~htL~qt~~~~~~gv~filk~~~n~k~l~ 139 (270)
T KOG4627|consen 68 KLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQ-----VHTLEQTMTQFTHGVNFILKYTENTKVLT 139 (270)
T ss_pred cEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCcc-----cccHHHHHHHHHHHHHHHHHhcccceeEE
Confidence 4999999963 221111223444556799999874 455432 235555555554444 444 455678
Q ss_pred EEEEccCHHHHHHHHHh-CCcceeEEEEeCCCCC
Q 025988 98 LVAKDFGARPAYLFALL-HPERVSGVITLGVPFI 130 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~~-~p~~v~~lv~~~~~~~ 130 (245)
+.|||.|+.+|....++ +..||.+++++++.|.
T Consensus 140 ~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 140 FGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred EcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 88999999999987766 4458999999887764
No 148
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.97 E-value=3.6e-05 Score=61.47 Aligned_cols=101 Identities=17% Similarity=0.312 Sum_probs=74.1
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCC-----C---------C--CCCCCCHHHHHHHHHHHHHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDP-----P---------A--EPEKASFKDITNDLLATLDH 90 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~-----~---------~--~~~~~~~~~~~~~i~~~l~~ 90 (245)
+||++||.+++...|..++..|.-.....|+|..|-.-.+.. + . .....++...++.+..++++
T Consensus 5 tIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~~ 84 (206)
T KOG2112|consen 5 TIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLIDN 84 (206)
T ss_pred EEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHHH
Confidence 899999999999999888888776678888886552211110 0 0 01234566667777788866
Q ss_pred h---C--CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 91 L---G--INKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 91 l---~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
. | ..++.+-|.||||.+++..+..+|..+.+++...+
T Consensus 85 e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 85 EPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 4 4 35789999999999999999999888888876654
No 149
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.97 E-value=2.7e-05 Score=71.28 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=64.5
Q ss_pred CceEEEEcCCC---CCccchHHHHHHHHHC-C-cEEEEeCCC----CCCCCCCCCCCCCCCHHHHHHHHHH---HHHHhC
Q 025988 25 PNVVVFLHGFP---EIWYSWRHQMVAVAAA-G-FRAIAPDYR----GYGLSDPPAEPEKASFKDITNDLLA---TLDHLG 92 (245)
Q Consensus 25 ~~~vl~lHG~~---~~~~~~~~~~~~l~~~-g-~~via~d~~----G~G~s~~~~~~~~~~~~~~~~~i~~---~l~~l~ 92 (245)
.|+||++||.+ ++...+ ....|... + +.|++++.| |+..+..........+.++...+.- -++.+|
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 35999999954 222222 12334333 3 899999998 4443332222223445554444333 334444
Q ss_pred --CCcEEEEEEccCHHHHHHHHHh--CCcceeEEEEeCCCCC
Q 025988 93 --INKVFLVAKDFGARPAYLFALL--HPERVSGVITLGVPFI 130 (245)
Q Consensus 93 --~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~~~ 130 (245)
.++|+|+|+|.||..+..++.. .+..++++|++++...
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4589999999999999887765 2457899998887654
No 150
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.92 E-value=2.2e-05 Score=63.29 Aligned_cols=121 Identities=21% Similarity=0.255 Sum_probs=74.5
Q ss_pred EEEECCEEEEEEecCCCCceEEEEcCC-CCCccchHHHHHHHHHCCcEEEEeCCC-CCCCCCC-CC-----CCCCCCHHH
Q 025988 8 YIKVQGLNLHVAETGTGPNVVVFLHGF-PEIWYSWRHQMVAVAAAGFRAIAPDYR-GYGLSDP-PA-----EPEKASFKD 79 (245)
Q Consensus 8 ~~~~~g~~~~~~~~g~~~~~vl~lHG~-~~~~~~~~~~~~~l~~~g~~via~d~~-G~G~s~~-~~-----~~~~~~~~~ 79 (245)
..++.|++-++...-+.+..||++--+ +-+-..-+..+..++.+||.|+.||+. |=-.|.. +. -....+...
T Consensus 22 ~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~ 101 (242)
T KOG3043|consen 22 EEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPK 101 (242)
T ss_pred eEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCccc
Confidence 345566655444333333356666554 444445788889999999999999975 4111211 00 001122233
Q ss_pred HHHHHHHHHHHh---C-CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 80 ITNDLLATLDHL---G-INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 80 ~~~~i~~~l~~l---~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
.-+++..+++.+ + .+++.++|++|||.++..+.+..| .+.+.|+.-+.+
T Consensus 102 ~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~ 154 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF 154 (242)
T ss_pred chhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc
Confidence 334444444443 5 678999999999999999988888 578888766554
No 151
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.90 E-value=6.2e-05 Score=68.91 Aligned_cols=121 Identities=19% Similarity=0.208 Sum_probs=81.3
Q ss_pred EEEE-CCEEEEE---EecCCCC-ceEEEEcCCCCCcc---ch--HHHHH---HHHHCCcEEEEeCCCCCCCCCCCCCCCC
Q 025988 8 YIKV-QGLNLHV---AETGTGP-NVVVFLHGFPEIWY---SW--RHQMV---AVAAAGFRAIAPDYRGYGLSDPPAEPEK 74 (245)
Q Consensus 8 ~~~~-~g~~~~~---~~~g~~~-~~vl~lHG~~~~~~---~~--~~~~~---~l~~~g~~via~d~~G~G~s~~~~~~~~ 74 (245)
.|.. ||++++. ..++.++ |+++..+-+|-... .+ ....+ .++.+||.||..|.||.|.|+..-+. .
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~ 101 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-E 101 (563)
T ss_pred eEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-e
Confidence 4555 9999874 4443332 47777773332222 11 22233 47778999999999999999876432 2
Q ss_pred CC-HHHHHHHHHHHHHHh--CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 75 AS-FKDITNDLLATLDHL--GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 75 ~~-~~~~~~~i~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++ -.+=.-|+.+.+... ...+|..+|-|++|...+.+|+.+|..+++++...+..
T Consensus 102 ~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 102 SSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 22 111133566666655 34689999999999999999999988899998776554
No 152
>PLN02606 palmitoyl-protein thioesterase
Probab=97.90 E-value=7.5e-05 Score=63.37 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=63.4
Q ss_pred CceEEEEcCCC--CCccchHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCcEEE
Q 025988 25 PNVVVFLHGFP--EIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH---LGINKVFL 98 (245)
Q Consensus 25 ~~~vl~lHG~~--~~~~~~~~~~~~l~~-~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~---l~~~~~~l 98 (245)
+.|||+.||++ .+...+..+.+.+.+ .|+.+..+- .|-+.. .. .--.+.++++.+.+-+.. +. +-+.+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s-~~~~~~~Qv~~vce~l~~~~~L~-~G~na 99 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DS-LFMPLRQQASIACEKIKQMKELS-EGYNI 99 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cc-cccCHHHHHHHHHHHHhcchhhc-CceEE
Confidence 34899999999 445567777777752 366555554 222210 11 112333344443333322 22 35899
Q ss_pred EEEccCHHHHHHHHHhCCc--ceeEEEEeCCCC
Q 025988 99 VAKDFGARPAYLFALLHPE--RVSGVITLGVPF 129 (245)
Q Consensus 99 vGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~ 129 (245)
||+|.||.++-.++.+.|+ .|+.+|.+++|-
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999999877 499999998764
No 153
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.84 E-value=5.7e-05 Score=61.56 Aligned_cols=104 Identities=17% Similarity=0.118 Sum_probs=55.5
Q ss_pred ceEEEEcCCCCCccchHHHHHHH----HHCCcEEEEeCCCC-----CCCCC------------CC--------C-CCCCC
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAV----AAAGFRAIAPDYRG-----YGLSD------------PP--------A-EPEKA 75 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l----~~~g~~via~d~~G-----~G~s~------------~~--------~-~~~~~ 75 (245)
+-||+|||+++|+..++.+...| .+.++..+-+|-|= -|-.. .+ . .....
T Consensus 5 ~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 84 (212)
T PF03959_consen 5 PRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEYE 84 (212)
T ss_dssp -EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG-
T ss_pred ceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccccc
Confidence 37999999999999988776544 33268888887541 11110 01 0 00123
Q ss_pred CHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhC--------CcceeEEEEeCCCCC
Q 025988 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLH--------PERVSGVITLGVPFI 130 (245)
Q Consensus 76 ~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~--------p~~v~~lv~~~~~~~ 130 (245)
.+++-.+.+.+++++.|. -..|+|+|.||.+|..+++.. ...++-+|++++...
T Consensus 85 ~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp --HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred CHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 456666777777777663 457999999999999888642 124788888887643
No 154
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=7.2e-05 Score=68.63 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=76.4
Q ss_pred CCCCceEEEEcCCCCCcc-----chHHH--HHHHHHCCcEEEEeCCCCCCCCCCC------CCCCCCCHHHHHHHHHHHH
Q 025988 22 GTGPNVVVFLHGFPEIWY-----SWRHQ--MVAVAAAGFRAIAPDYRGYGLSDPP------AEPEKASFKDITNDLLATL 88 (245)
Q Consensus 22 g~~~~~vl~lHG~~~~~~-----~~~~~--~~~l~~~g~~via~d~~G~G~s~~~------~~~~~~~~~~~~~~i~~~l 88 (245)
|++-|+|+++=|.|+-.. .|... ...|+..||-|+.+|-||.-..... .......+++.++-+.-+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~La 718 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLA 718 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHH
Confidence 334469999999986332 23222 3467788999999999996654332 1223456778888888888
Q ss_pred HHh---CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEE
Q 025988 89 DHL---GINKVFLVAKDFGARPAYLFALLHPERVSGVIT 124 (245)
Q Consensus 89 ~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 124 (245)
++. +.++|.+-|+|.||.+++...+++|+.++..|.
T Consensus 719 eq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA 757 (867)
T KOG2281|consen 719 EQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA 757 (867)
T ss_pred HhcCcccchheeEeccccccHHHHHHhhcCcceeeEEec
Confidence 876 467999999999999999999999997776664
No 155
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=0.0004 Score=66.82 Aligned_cols=123 Identities=17% Similarity=0.167 Sum_probs=86.3
Q ss_pred ceeEEEECCEEEEEEecC-------CCCceEEEEcCCCCCcc-------chHHHHHHHHHCCcEEEEeCCCCCCCCCCC-
Q 025988 5 EHKYIKVQGLNLHVAETG-------TGPNVVVFLHGFPEIWY-------SWRHQMVAVAAAGFRAIAPDYRGYGLSDPP- 69 (245)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g-------~~~~~vl~lHG~~~~~~-------~~~~~~~~l~~~g~~via~d~~G~G~s~~~- 69 (245)
+...+..+|...++...- +..|.|+.+||.|++.. .|..+ .....|+.|+.+|.||-|.....
T Consensus 499 ~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 499 EFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred eeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhH
Confidence 344566688888776432 33468999999997332 25444 45667999999999998775432
Q ss_pred -----CCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEEEccCHHHHHHHHHhCCccee-EEEEeCCCC
Q 025988 70 -----AEPEKASFKDITNDLLATLDHL--GINKVFLVAKDFGARPAYLFALLHPERVS-GVITLGVPF 129 (245)
Q Consensus 70 -----~~~~~~~~~~~~~~i~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~-~lv~~~~~~ 129 (245)
........+++...+..+++.. +.+++.+.|+|.||.++..++...|+.+- ..+.++|..
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 2223455666666666666654 55689999999999999999999985544 448777663
No 156
>COG0627 Predicted esterase [General function prediction only]
Probab=97.79 E-value=0.00012 Score=63.03 Aligned_cols=107 Identities=19% Similarity=0.201 Sum_probs=69.9
Q ss_pred ceEEEEcCCCCCccch---HHHHHHHHHCCcEEEEeCCC--------------CCCCCCCCCCC-----C-CCCHHH-HH
Q 025988 26 NVVVFLHGFPEIWYSW---RHQMVAVAAAGFRAIAPDYR--------------GYGLSDPPAEP-----E-KASFKD-IT 81 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~---~~~~~~l~~~g~~via~d~~--------------G~G~s~~~~~~-----~-~~~~~~-~~ 81 (245)
|+++++||...+...| ..+-......|..++++|-. |-+.|--.... . .|.++. +.
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl~ 134 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFLT 134 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHHH
Confidence 5899999988765443 22223444567888887533 32222111100 1 256666 45
Q ss_pred HHHHHHHHHhCC-----CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCCC
Q 025988 82 NDLLATLDHLGI-----NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP 132 (245)
Q Consensus 82 ~~i~~~l~~l~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~ 132 (245)
+++...+++... ++-.++||||||.-|+.+|+++|++++.+..+++...+.
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 567755554322 268899999999999999999999999999988766543
No 157
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.66 E-value=0.00059 Score=61.63 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=67.2
Q ss_pred eEEEEcCCCCCccc-h--HHHHHHHHH-CCcEEEEeCCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHhC-----
Q 025988 27 VVVFLHGFPEIWYS-W--RHQMVAVAA-AGFRAIAPDYRGYGLSDPPA-----EPEKASFKDITNDLLATLDHLG----- 92 (245)
Q Consensus 27 ~vl~lHG~~~~~~~-~--~~~~~~l~~-~g~~via~d~~G~G~s~~~~-----~~~~~~~~~~~~~i~~~l~~l~----- 92 (245)
||+|.-|.-+.... | ..++..|++ .|--||++.+|-||.|..-. .....+.++...|+..|++.+.
T Consensus 30 pifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~ 109 (434)
T PF05577_consen 30 PIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNT 109 (434)
T ss_dssp EEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcC
Confidence 45555454444332 1 123344443 37889999999999996431 2234589999999999997762
Q ss_pred --CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 93 --INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 93 --~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
-.+++++|-|.||++|.-+-.++|+.|.+.+.-++|...
T Consensus 110 ~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 110 APNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp GCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred CCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 237999999999999999999999999999998888653
No 158
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.64 E-value=6.7e-05 Score=63.09 Aligned_cols=104 Identities=16% Similarity=0.118 Sum_probs=52.2
Q ss_pred CceEEEEcCCCCCc---cchHHHHHHHHH--CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C-CcEE
Q 025988 25 PNVVVFLHGFPEIW---YSWRHQMVAVAA--AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG-I-NKVF 97 (245)
Q Consensus 25 ~~~vl~lHG~~~~~---~~~~~~~~~l~~--~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~-~-~~~~ 97 (245)
+.|||+.||++++. ..+..+...+.+ .|.-|.++++-.-..++.... .--++.+.++.+.+.+.... . +-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s-~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENS-FFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHH-HHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhh-HHHHHHHHHHHHHHHHhhChhhhccee
Confidence 34899999999754 345555444332 367777777631111110000 00123334444444443321 1 4699
Q ss_pred EEEEccCHHHHHHHHHhCCc-ceeEEEEeCCCC
Q 025988 98 LVAKDFGARPAYLFALLHPE-RVSGVITLGVPF 129 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~~~p~-~v~~lv~~~~~~ 129 (245)
+||+|.||.++-.++.+.|+ .|..+|.+++|-
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 99999999999999999765 699999998764
No 159
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.64 E-value=0.00057 Score=58.21 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=62.7
Q ss_pred eEEEEcCCCCCccc--hHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCcEEEEE
Q 025988 27 VVVFLHGFPEIWYS--WRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH---LGINKVFLVA 100 (245)
Q Consensus 27 ~vl~lHG~~~~~~~--~~~~~~~l~~-~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~---l~~~~~~lvG 100 (245)
|+|+.||++++... ...+.+.+.+ .|..|.++.. |.+.. +..--.+.+.++.+.+-+.. +. +-+++||
T Consensus 27 P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~--~s~~~~~~~Qve~vce~l~~~~~l~-~G~naIG 100 (314)
T PLN02633 27 PFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVG--DSWLMPLTQQAEIACEKVKQMKELS-QGYNIVG 100 (314)
T ss_pred CeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcc--ccceeCHHHHHHHHHHHHhhchhhh-CcEEEEE
Confidence 89999999976554 4444444433 2566666544 33311 11122344444444444433 22 3599999
Q ss_pred EccCHHHHHHHHHhCCc--ceeEEEEeCCCC
Q 025988 101 KDFGARPAYLFALLHPE--RVSGVITLGVPF 129 (245)
Q Consensus 101 hS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~ 129 (245)
||.||.++-.++.+.|+ .|+.+|.+++|-
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999887 599999998764
No 160
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.63 E-value=0.00012 Score=53.34 Aligned_cols=44 Identities=18% Similarity=0.471 Sum_probs=29.2
Q ss_pred CCCceeEEEECCEEEEEEecC---CCCceEEEEcCCCCCccchHHHH
Q 025988 2 DKIEHKYIKVQGLNLHVAETG---TGPNVVVFLHGFPEIWYSWRHQM 45 (245)
Q Consensus 2 ~~~~~~~~~~~g~~~~~~~~g---~~~~~vl~lHG~~~~~~~~~~~~ 45 (245)
|.+.+-.++++|++||+.... ++..||||+||||+|-..|.+++
T Consensus 66 N~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 66 NSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred HcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 566777888899999987543 33349999999999988887764
No 161
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.62 E-value=0.00069 Score=56.22 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=65.2
Q ss_pred ceEEEEcCCCCCccc--hHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEE
Q 025988 26 NVVVFLHGFPEIWYS--WRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG--INKVFLVA 100 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~--~~~~~~~l~~~-g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~--~~~~~lvG 100 (245)
.|+|++||++++..+ ...+.+.+.+. |..|++.|.- -| .+ +..-..+.++++-+.+.+.... .+-+++||
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g--~~--~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DG--IK--DSSLMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CC--cc--hhhhccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 489999999988777 66666666543 7888888863 22 11 1111233444444333333221 24589999
Q ss_pred EccCHHHHHHHHHhCCc-ceeEEEEeCCCC
Q 025988 101 KDFGARPAYLFALLHPE-RVSGVITLGVPF 129 (245)
Q Consensus 101 hS~Gg~~a~~~a~~~p~-~v~~lv~~~~~~ 129 (245)
.|.||.++-.++..-|+ .|..+|.+++|-
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999988877554 588899888764
No 162
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.55 E-value=0.0012 Score=58.88 Aligned_cols=121 Identities=15% Similarity=0.139 Sum_probs=78.8
Q ss_pred EEEEC---CEEEEEEe--cC---CCCceEEEEcCCCCCccchHHHHH-------------------HHHHCCcEEEEeCC
Q 025988 8 YIKVQ---GLNLHVAE--TG---TGPNVVVFLHGFPEIWYSWRHQMV-------------------AVAAAGFRAIAPDY 60 (245)
Q Consensus 8 ~~~~~---g~~~~~~~--~g---~~~~~vl~lHG~~~~~~~~~~~~~-------------------~l~~~g~~via~d~ 60 (245)
++.++ +..++|.- .. +..|+||.+.|.|+++..|-.+.+ .+.+ -.+++-+|.
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~ 93 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQ 93 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--
T ss_pred EEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEee
Confidence 55665 56666642 22 334699999999999888754321 1222 378899996
Q ss_pred C-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCCcEEEEEEccCHHHHHHHHHh----C------CcceeE
Q 025988 61 R-GYGLSDPPAEP-EKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALL----H------PERVSG 121 (245)
Q Consensus 61 ~-G~G~s~~~~~~-~~~~~~~~~~~i~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~~ 121 (245)
| |.|.|...... ...+.++.++++..+|..+ .-.+++|.|.|+||..+-.+|.+ . +-.+++
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 5 89998765432 2457888999999888765 44589999999999987766654 3 346899
Q ss_pred EEEeCCCC
Q 025988 122 VITLGVPF 129 (245)
Q Consensus 122 lv~~~~~~ 129 (245)
+++.++-.
T Consensus 174 i~IGng~~ 181 (415)
T PF00450_consen 174 IAIGNGWI 181 (415)
T ss_dssp EEEESE-S
T ss_pred ceecCccc
Confidence 99887654
No 163
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.52 E-value=0.00034 Score=59.86 Aligned_cols=86 Identities=28% Similarity=0.354 Sum_probs=49.9
Q ss_pred HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEEEccCHHHHHHHHHh----CC
Q 025988 44 QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI---NKVFLVAKDFGARPAYLFALL----HP 116 (245)
Q Consensus 44 ~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~---~~~~lvGhS~Gg~~a~~~a~~----~p 116 (245)
++..+.++||.|+++|..|.|..-.......+..-+.++...++....++ .++.++|||.||..++..+.. .|
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 45566678999999999999982111110111111112222222222232 479999999999998765533 46
Q ss_pred cc---eeEEEEeCCCC
Q 025988 117 ER---VSGVITLGVPF 129 (245)
Q Consensus 117 ~~---v~~lv~~~~~~ 129 (245)
|. +.+.+..+++.
T Consensus 98 eL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPPA 113 (290)
T ss_pred ccccceeEEeccCCcc
Confidence 63 67777665543
No 164
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.47 E-value=0.00028 Score=64.89 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=63.0
Q ss_pred CceEEEEcCCC---CCc-cchHHHHHHHHHCCcEEEEeCCC----CCCCCCCCCCC-CCCCHHHHHHHHHHHHHH---hC
Q 025988 25 PNVVVFLHGFP---EIW-YSWRHQMVAVAAAGFRAIAPDYR----GYGLSDPPAEP-EKASFKDITNDLLATLDH---LG 92 (245)
Q Consensus 25 ~~~vl~lHG~~---~~~-~~~~~~~~~l~~~g~~via~d~~----G~G~s~~~~~~-~~~~~~~~~~~i~~~l~~---l~ 92 (245)
-|++|++||.+ ++. .....-...+...+.-||+++.| |+-.+...... ..+.+.++...+.-+-+. +|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 36999999964 333 12222234455668999999988 44333222222 356677766655555444 44
Q ss_pred --CCcEEEEEEccCHHHHHHHHHhC--CcceeEEEEeCCCCC
Q 025988 93 --INKVFLVAKDFGARPAYLFALLH--PERVSGVITLGVPFI 130 (245)
Q Consensus 93 --~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lv~~~~~~~ 130 (245)
.++|+|.|||.||..+..+...- ...++++|+.++...
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred cCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 45799999999999988776652 248999999998543
No 165
>COG3150 Predicted esterase [General function prediction only]
Probab=97.45 E-value=0.0015 Score=50.54 Aligned_cols=90 Identities=20% Similarity=0.300 Sum_probs=63.7
Q ss_pred EEEEcCCCCCccchHHHH--HHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCH
Q 025988 28 VVFLHGFPEIWYSWRHQM--VAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (245)
Q Consensus 28 vl~lHG~~~~~~~~~~~~--~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg 105 (245)
||.+|||-+|..+...+. +.+.+. .+-+ +.+... ......+.++.+..++..++-++..|||-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i-------~y~~p~---l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDI-------EYSTPH---LPHDPQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccce-------eeecCC---CCCCHHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 799999999888876653 223222 2222 222211 124678889999999999998889999999999
Q ss_pred HHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 106 RPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 106 ~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
..|..++..+- ++++ +++|...|
T Consensus 71 Y~At~l~~~~G--irav-~~NPav~P 93 (191)
T COG3150 71 YYATWLGFLCG--IRAV-VFNPAVRP 93 (191)
T ss_pred HHHHHHHHHhC--Chhh-hcCCCcCc
Confidence 99999998875 4444 45666543
No 166
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.44 E-value=0.0017 Score=56.18 Aligned_cols=103 Identities=21% Similarity=0.233 Sum_probs=71.1
Q ss_pred CceEEEEcCCCCCccchHH-H-HHHHHHCCcEEEEeCCCCCCCCCCCCCCCC---CCHHHH-------HH---HHHHHHH
Q 025988 25 PNVVVFLHGFPEIWYSWRH-Q-MVAVAAAGFRAIAPDYRGYGLSDPPAEPEK---ASFKDI-------TN---DLLATLD 89 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~-~-~~~l~~~g~~via~d~~G~G~s~~~~~~~~---~~~~~~-------~~---~i~~~l~ 89 (245)
.|.+|.|.|.++.....+. + +..|.+.|+..+.+..|-||... |.+... .+..++ +. .+...++
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~Rk-P~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRK-PKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccC-hhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 4588899999986544333 2 56677779999999999998764 322111 112111 11 2233444
Q ss_pred HhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 90 HLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 90 ~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
+.|..++.+.|.||||.+|...|+.+|..+..+-++++.
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 458899999999999999999999999987776666654
No 167
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.43 E-value=0.00044 Score=63.60 Aligned_cols=91 Identities=15% Similarity=0.263 Sum_probs=57.9
Q ss_pred cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEEEccCHHHHHHHHHh
Q 025988 39 YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 39 ~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
..|..+++.|.+.||. --|+.|-..--+-........+++-..+..+++.. +.++++||||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4689999999999987 34555432211110000112234444455555433 46899999999999999998764
Q ss_pred CC---------------cceeEEEEeCCCCCC
Q 025988 115 HP---------------ERVSGVITLGVPFIP 131 (245)
Q Consensus 115 ~p---------------~~v~~lv~~~~~~~~ 131 (245)
-. ..|++.|.+++|+..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCC
Confidence 21 247899999988754
No 168
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.35 E-value=0.00019 Score=63.85 Aligned_cols=90 Identities=16% Similarity=0.331 Sum_probs=61.4
Q ss_pred cchHHHHHHHHHCCcE------EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHH
Q 025988 39 YSWRHQMVAVAAAGFR------AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFA 112 (245)
Q Consensus 39 ~~~~~~~~~l~~~g~~------via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 112 (245)
..|..+++.|..-||. -..+|.|= |-...+..+..+..+.+-|+...+.-|.++++||+||||+.+...+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4799999999988877 34567772 21222211223444444455444555779999999999999999999
Q ss_pred HhCCc--------ceeEEEEeCCCCCC
Q 025988 113 LLHPE--------RVSGVITLGVPFIP 131 (245)
Q Consensus 113 ~~~p~--------~v~~lv~~~~~~~~ 131 (245)
..+++ -|+++|.+++++..
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchhcC
Confidence 88876 36777777776543
No 169
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.35 E-value=0.0039 Score=50.25 Aligned_cols=106 Identities=15% Similarity=0.186 Sum_probs=66.3
Q ss_pred ceEEEEcCCCC-CccchHH---------------HHHHHHHCCcEEEEeCCC---CCCCC-CCCCCCCCCCHHHHHHH-H
Q 025988 26 NVVVFLHGFPE-IWYSWRH---------------QMVAVAAAGFRAIAPDYR---GYGLS-DPPAEPEKASFKDITND-L 84 (245)
Q Consensus 26 ~~vl~lHG~~~-~~~~~~~---------------~~~~l~~~g~~via~d~~---G~G~s-~~~~~~~~~~~~~~~~~-i 84 (245)
+.+|++||-+- .+..|.. .+....+.||.|+..+.- -+-.+ +.|.... .+..+.+.- -
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyi-rt~veh~~yvw 180 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYI-RTPVEHAKYVW 180 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhc-cchHHHHHHHH
Confidence 38999999862 2233432 234444569999988643 12222 2222111 123333332 2
Q ss_pred HHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCc--ceeEEEEeCCCCCCC
Q 025988 85 LATLDHLGINKVFLVAKDFGARPAYLFALLHPE--RVSGVITLGVPFIPP 132 (245)
Q Consensus 85 ~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~~~~ 132 (245)
..++.-...+.+.+|.||.||...+.+..+.|+ +|.++.+.+.++..|
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p 230 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSP 230 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCc
Confidence 344445577899999999999999999999885 788888887775443
No 170
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.35 E-value=0.0014 Score=56.82 Aligned_cols=102 Identities=18% Similarity=0.199 Sum_probs=62.6
Q ss_pred eEEEEcCCCCCccc-hHHHHHHHHHCCc--EEEEeCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEE
Q 025988 27 VVVFLHGFPEIWYS-WRHQMVAVAAAGF--RAIAPDYRGYGLSDP---PAEPEKASFKDITNDLLATLDHLGINKVFLVA 100 (245)
Q Consensus 27 ~vl~lHG~~~~~~~-~~~~~~~l~~~g~--~via~d~~G~G~s~~---~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvG 100 (245)
.+||+||+.-+-.. -...++...+.|+ ..+.+.+|.-|.--. ..+...|+..++..-+..+.+....++++|++
T Consensus 118 vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilA 197 (377)
T COG4782 118 VLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLA 197 (377)
T ss_pred EEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEE
Confidence 89999999755433 3334455555554 456677775554211 11222455555555555555555788999999
Q ss_pred EccCHHHHHHHHHh----C----CcceeEEEEeCCC
Q 025988 101 KDFGARPAYLFALL----H----PERVSGVITLGVP 128 (245)
Q Consensus 101 hS~Gg~~a~~~a~~----~----p~~v~~lv~~~~~ 128 (245)
||||.-+++..... . +.+++-+|+-.+-
T Consensus 198 HSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 198 HSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred ecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 99999998875433 2 3356777776544
No 171
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.34 E-value=0.00057 Score=52.54 Aligned_cols=52 Identities=25% Similarity=0.268 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHh----CCCcEEEEEEccCHHHHHHHHHhCCc----ceeEEEEeCCCCC
Q 025988 79 DITNDLLATLDHL----GINKVFLVAKDFGARPAYLFALLHPE----RVSGVITLGVPFI 130 (245)
Q Consensus 79 ~~~~~i~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lv~~~~~~~ 130 (245)
.+.+.+...++.. ...+++++|||+||.+|..++...+. .+..++.+++|..
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 3444555555443 56799999999999999998888654 5677888877643
No 172
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.19 E-value=0.0013 Score=59.24 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=66.9
Q ss_pred CCCceEEEEcCCC---CCccchHHHHHHHHHCC-cEEEEeCCC-C-CCCCCCC------CCCCCCCHHHHHH---HHHHH
Q 025988 23 TGPNVVVFLHGFP---EIWYSWRHQMVAVAAAG-FRAIAPDYR-G-YGLSDPP------AEPEKASFKDITN---DLLAT 87 (245)
Q Consensus 23 ~~~~~vl~lHG~~---~~~~~~~~~~~~l~~~g-~~via~d~~-G-~G~s~~~------~~~~~~~~~~~~~---~i~~~ 87 (245)
++.|++|+|||.+ ++...-..--..|++.| +-||++++| | +|.=+.+ .......+.+++- .+.+-
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 4446999999963 33333222345788887 889999987 1 2221111 0011234444443 44555
Q ss_pred HHHhCC--CcEEEEEEccCHHHHHHHHHhCCc---ceeEEEEeCCCCC
Q 025988 88 LDHLGI--NKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGVPFI 130 (245)
Q Consensus 88 l~~l~~--~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~~~ 130 (245)
++++|. ++|.|.|+|.||+.+..+.+. |. .+.++|+.+++..
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 666764 579999999999998876654 54 6788888887764
No 173
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.09 E-value=0.001 Score=50.02 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh
Q 025988 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
.+.+.+.++++..+..++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 455566666666666789999999999999988876
No 174
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.01 E-value=0.0077 Score=52.92 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=65.8
Q ss_pred CceEEEEcCCCCCccchHHHH-------HHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEE
Q 025988 25 PNVVVFLHGFPEIWYSWRHQM-------VAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVF 97 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~-------~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~ 97 (245)
.|.||++||.+-.-.....++ ..| + ...++++|..-...-... ......+.+.++-...+++..|.++++
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~~-~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEHG-HKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccCC-CcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 359999999864333322222 223 2 357888887633200011 112345667777777777777999999
Q ss_pred EEEEccCHHHHHHHHHhC--C---cceeEEEEeCCCCC
Q 025988 98 LVAKDFGARPAYLFALLH--P---ERVSGVITLGVPFI 130 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~~~--p---~~v~~lv~~~~~~~ 130 (245)
|+|-|.||.+++.+...- + ...+++|+++|-..
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVN 236 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcC
Confidence 999999999999876552 1 13678899987544
No 175
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.93 E-value=0.0042 Score=54.50 Aligned_cols=84 Identities=23% Similarity=0.218 Sum_probs=63.4
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEEEc
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVFLVAKD 102 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l----~~~~~~lvGhS 102 (245)
.-||+.|=++-...=+.+...|.++|+.||-+|-.-|=+|.+ +.++.++|+..+++.+ +.+++.|+|+|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 456666655544444567889999999999999766666543 5677888888888765 67899999999
Q ss_pred cCHHHHHHHHHhCCc
Q 025988 103 FGARPAYLFALLHPE 117 (245)
Q Consensus 103 ~Gg~~a~~~a~~~p~ 117 (245)
+|+=+.-....+.|.
T Consensus 335 fGADvlP~~~n~L~~ 349 (456)
T COG3946 335 FGADVLPFAYNRLPP 349 (456)
T ss_pred ccchhhHHHHHhCCH
Confidence 999887766666554
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.82 E-value=0.0054 Score=53.99 Aligned_cols=103 Identities=20% Similarity=0.184 Sum_probs=74.5
Q ss_pred eEEEEcCCCCCccchHH---HHHHHH-HCCcEEEEeCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhCC-
Q 025988 27 VVVFLHGFPEIWYSWRH---QMVAVA-AAGFRAIAPDYRGYGLSDPPAE--------PEKASFKDITNDLLATLDHLGI- 93 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~---~~~~l~-~~g~~via~d~~G~G~s~~~~~--------~~~~~~~~~~~~i~~~l~~l~~- 93 (245)
||+|.-|.-++.+.+.. ++-.++ +.+--+|-+..|-||+|-.-.. ..-.+.++-..|..+++.+|+.
T Consensus 82 PIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~ 161 (492)
T KOG2183|consen 82 PIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRD 161 (492)
T ss_pred ceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhc
Confidence 79999998777655432 122222 3356788899999999854211 1123566777788888877733
Q ss_pred -----CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 94 -----NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 94 -----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
.+|+.+|-|.||+++.-+=.++|..+.|.+.-+.|.
T Consensus 162 ~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 162 LSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred cccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 479999999999999999999999998888777664
No 177
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.82 E-value=0.0082 Score=54.43 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=60.4
Q ss_pred HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCcEEEEEEccCHHHHHHHHHhCCcc
Q 025988 44 QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL-----GINKVFLVAKDFGARPAYLFALLHPER 118 (245)
Q Consensus 44 ~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 118 (245)
+...| +.|+.|+-+... ..| ....++++.+.....++++. +..+.++||.|.||-.++.+|+.+|+.
T Consensus 93 vG~AL-~~GHPvYFV~F~-----p~P--~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 93 VGVAL-RAGHPVYFVGFF-----PEP--EPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHH-HcCCCeEEEEec-----CCC--CCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 34455 468999877655 122 23568888888777777665 334899999999999999999999999
Q ss_pred eeEEEEeCCCCC
Q 025988 119 VSGVITLGVPFI 130 (245)
Q Consensus 119 v~~lv~~~~~~~ 130 (245)
+.-+|+.+.|..
T Consensus 165 ~gplvlaGaPls 176 (581)
T PF11339_consen 165 VGPLVLAGAPLS 176 (581)
T ss_pred cCceeecCCCcc
Confidence 999998887753
No 178
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.71 E-value=0.00085 Score=53.91 Aligned_cols=101 Identities=21% Similarity=0.311 Sum_probs=63.5
Q ss_pred ceEEEEcCCCCCccchHH---HHHHHHHCCcEEEEeCCCCCCCCCCCC------------------CC--CCCCHHH-HH
Q 025988 26 NVVVFLHGFPEIWYSWRH---QMVAVAAAGFRAIAPDYRGYGLSDPPA------------------EP--EKASFKD-IT 81 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~---~~~~l~~~g~~via~d~~G~G~s~~~~------------------~~--~~~~~~~-~~ 81 (245)
|+|.+|.|+.-+.+++-. .-+..++.|+.|++||---.|..-... ++ ..|.+-+ +.
T Consensus 45 P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~ 124 (283)
T KOG3101|consen 45 PVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVV 124 (283)
T ss_pred ceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHH
Confidence 589999999877666432 112345679999999954333221110 00 0122222 33
Q ss_pred HHHHHHHHH----hCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeC
Q 025988 82 NDLLATLDH----LGINKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (245)
Q Consensus 82 ~~i~~~l~~----l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 126 (245)
+.+.++++. ++..++.|.||||||.=|+..+.+.|.+.+.+-...
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFA 173 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFA 173 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccc
Confidence 455555542 244579999999999999999999998877766544
No 179
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.62 E-value=0.0068 Score=49.81 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=37.1
Q ss_pred HHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhC----CcceeEEEEeCCCCCC
Q 025988 82 NDLLATLDHLGINKVFLVAKDFGARPAYLFALLH----PERVSGVITLGVPFIP 131 (245)
Q Consensus 82 ~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lv~~~~~~~~ 131 (245)
+-+..+++..+. ++.+.|||.||.+|...++.. .++|.+++..++|...
T Consensus 73 ~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 73 AYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 344445555443 599999999999999988874 3589999999888654
No 180
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.58 E-value=0.025 Score=50.09 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=32.4
Q ss_pred cEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 95 KVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 95 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
+++++|+|.||.+|...|.-.|..+++++=.++...+
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 8899999999999999999999999999977665443
No 181
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.55 E-value=0.0067 Score=51.39 Aligned_cols=114 Identities=18% Similarity=0.161 Sum_probs=67.7
Q ss_pred EEEEEEecC----CCCceEEEEcCC--CCCccchHHHHHHHHHC---CcEEEEeCCCCCCCCCCC-CC--CCCCCHHHHH
Q 025988 14 LNLHVAETG----TGPNVVVFLHGF--PEIWYSWRHQMVAVAAA---GFRAIAPDYRGYGLSDPP-AE--PEKASFKDIT 81 (245)
Q Consensus 14 ~~~~~~~~g----~~~~~vl~lHG~--~~~~~~~~~~~~~l~~~---g~~via~d~~G~G~s~~~-~~--~~~~~~~~~~ 81 (245)
..+.|...| .+-|++++.||- -.+...|+.+-..+.+. .-.+|.+|.-- ..+. .. ......+.++
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L~ 159 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYID---VKKRREELHCNEAYWRFLA 159 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCC---HHHHHHHhcccHHHHHHHH
Confidence 344555555 223589999984 45555565444444332 23455555431 1110 00 0112344455
Q ss_pred HHHHHHHHHh-----CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 82 NDLLATLDHL-----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 82 ~~i~~~l~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+++.-++++- ..+.-+|+|.|+||.+++..+..||+++..++.-++.+.
T Consensus 160 ~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 160 QELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 5555555543 224568999999999999999999999999998887654
No 182
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.54 E-value=0.0065 Score=49.51 Aligned_cols=49 Identities=20% Similarity=0.284 Sum_probs=36.9
Q ss_pred HHHHHHHHHHh---CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 81 TNDLLATLDHL---GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 81 ~~~i~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
-++..++|... +.++|.|+|.|.||-+|+.+|+.+| .|+++|.++++..
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 44455555544 3368999999999999999999999 6999999987643
No 183
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.53 E-value=0.0096 Score=47.05 Aligned_cols=55 Identities=24% Similarity=0.213 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHhC-----CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 77 FKDITNDLLATLDHLG-----INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
-+.-+.++..|++.|. -.++.++|||+|+.++-..+...+..+..+|+++.|...
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 4556778888887773 236899999999999988777767789999999887543
No 184
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.42 E-value=0.0063 Score=49.96 Aligned_cols=24 Identities=25% Similarity=0.239 Sum_probs=20.4
Q ss_pred CCCcEEEEEEccCHHHHHHHHHhC
Q 025988 92 GINKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 456899999999999999887763
No 185
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.42 E-value=0.055 Score=44.06 Aligned_cols=97 Identities=19% Similarity=0.228 Sum_probs=68.8
Q ss_pred eEEEEcCCCCCccc---hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CcEEEE
Q 025988 27 VVVFLHGFPEIWYS---WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI----NKVFLV 99 (245)
Q Consensus 27 ~vl~lHG~~~~~~~---~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~----~~~~lv 99 (245)
-|||+-|.++.-.. -..+...|.+.+|.++-+.++.+ +......++++-++|+..++++++. .+++++
T Consensus 38 ~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss-----y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 38 KVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS-----YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc-----ccccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 79999998865433 35567788888999999988732 1122234566668899999998743 379999
Q ss_pred EEccCHHHHHHHHHh--CCcceeEEEEeCCC
Q 025988 100 AKDFGARPAYLFALL--HPERVSGVITLGVP 128 (245)
Q Consensus 100 GhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~ 128 (245)
|||-|+.-.+.+... .|..+.+.|+..+.
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 999999988877633 34556666666554
No 186
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.41 E-value=0.036 Score=44.99 Aligned_cols=102 Identities=21% Similarity=0.130 Sum_probs=60.1
Q ss_pred ceEEEEcCCCCCccchHHHH----HHHHHCCcEEEEeCCCC------C---CCC---CCCC---------------CC-C
Q 025988 26 NVVVFLHGFPEIWYSWRHQM----VAVAAAGFRAIAPDYRG------Y---GLS---DPPA---------------EP-E 73 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~----~~l~~~g~~via~d~~G------~---G~s---~~~~---------------~~-~ 73 (245)
+-|||||||-+|...++.-. ..+.+. +..+-+|-|= . ..+ +.+. .. .
T Consensus 6 ~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~~ 84 (230)
T KOG2551|consen 6 LRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFTE 84 (230)
T ss_pred ceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccccc
Confidence 37999999999988876532 233333 6666666551 0 110 0111 00 1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh---------CCcceeEEEEeCCCCC
Q 025988 74 KASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL---------HPERVSGVITLGVPFI 130 (245)
Q Consensus 74 ~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~---------~p~~v~~lv~~~~~~~ 130 (245)
....+.-.+-+.+.+.+.|. =-.|+|+|.|+.++..++.. +| .++-+|++++-..
T Consensus 85 ~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~ 148 (230)
T KOG2551|consen 85 YFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKF 148 (230)
T ss_pred ccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCC
Confidence 12344445556666666552 23689999999999988872 12 2577777776543
No 187
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.31 E-value=0.11 Score=43.06 Aligned_cols=90 Identities=22% Similarity=0.331 Sum_probs=55.1
Q ss_pred eEEEEcCC--CCCc-cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHh----CC--
Q 025988 27 VVVFLHGF--PEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND----LLATLDHL----GI-- 93 (245)
Q Consensus 27 ~vl~lHG~--~~~~-~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~----i~~~l~~l----~~-- 93 (245)
.|-|+-|. +... -.++.+.+.|+++||.|+|.-..- ..+-...|+. ....++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~ 87 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQKRGGLDP 87 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45555553 2222 248889999999999999986641 1111122222 22222222 22
Q ss_pred --CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 94 --NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 94 --~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
-+++-||||+|+.+-+.+....+..-++-|+|+-
T Consensus 88 ~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 88 AYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred ccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2567799999999998888877655577777753
No 188
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.19 E-value=0.01 Score=49.54 Aligned_cols=50 Identities=10% Similarity=0.135 Sum_probs=39.8
Q ss_pred HHHHHHHHHH---hCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 81 TNDLLATLDH---LGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 81 ~~~i~~~l~~---l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.+.+.-++++ .+-++..++|||+||.+++.....+|+.+...+++++...
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 3344445554 2456789999999999999999999999999999988753
No 189
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.91 E-value=0.021 Score=45.21 Aligned_cols=52 Identities=15% Similarity=0.048 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh--C----CcceeEEEEeCCCCCC
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL--H----PERVSGVITLGVPFIP 131 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~--~----p~~v~~lv~~~~~~~~ 131 (245)
+.+.|.+....-...+++|+|+|.|+.++..++.. . .++|.++|+++-|...
T Consensus 67 ~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 67 LVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 33344444444456799999999999999998877 2 3589999999887654
No 190
>PLN02162 triacylglycerol lipase
Probab=95.91 E-value=0.019 Score=51.70 Aligned_cols=53 Identities=26% Similarity=0.395 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh---C-----CcceeEEEEeCCCC
Q 025988 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL---H-----PERVSGVITLGVPF 129 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~---~-----p~~v~~lv~~~~~~ 129 (245)
..++.+.+.++++.....++++.|||+||.+|..+|.. + .+++.+++..+.|-
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 33455566666666666789999999999999887642 2 12345666666553
No 191
>PLN02209 serine carboxypeptidase
Probab=95.82 E-value=0.14 Score=46.31 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=65.5
Q ss_pred CceEEEEcCCCCCccchHHHHH-----------------------HHHHCCcEEEEeC-CCCCCCCCCCCCCCCCCHHHH
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMV-----------------------AVAAAGFRAIAPD-YRGYGLSDPPAEPEKASFKDI 80 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~-----------------------~l~~~g~~via~d-~~G~G~s~~~~~~~~~~~~~~ 80 (245)
.|+||.+-|.|+++..+-.+.+ ...+ -.+++-+| ..|.|.|.........+-++.
T Consensus 68 ~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (437)
T PLN02209 68 DPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK-TANIIFLDQPVGSGFSYSKTPIERTSDTSE 146 (437)
T ss_pred CCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh-cCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 3599999999998876533221 1112 36788889 458888854322112233344
Q ss_pred HHHHHHHHHHh-------CCCcEEEEEEccCHHHHHHHHHhC----------CcceeEEEEeCCC
Q 025988 81 TNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALLH----------PERVSGVITLGVP 128 (245)
Q Consensus 81 ~~~i~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~----------p~~v~~lv~~~~~ 128 (245)
++|+..++..+ .-.+++|.|.|.||..+-.+|..- +-.++++++.++-
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcc
Confidence 57777766553 335799999999998777766431 1257788877754
No 192
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.77 E-value=0.073 Score=48.14 Aligned_cols=121 Identities=13% Similarity=0.091 Sum_probs=71.2
Q ss_pred eEEEEC---CEEEEEE--ecC---CCCceEEEEcCCCCCccchHHHH---H-------------H-------HHHCCcEE
Q 025988 7 KYIKVQ---GLNLHVA--ETG---TGPNVVVFLHGFPEIWYSWRHQM---V-------------A-------VAAAGFRA 55 (245)
Q Consensus 7 ~~~~~~---g~~~~~~--~~g---~~~~~vl~lHG~~~~~~~~~~~~---~-------------~-------l~~~g~~v 55 (245)
-+++++ +..++|. +.. +..|+||.+-|.|+++..+-.+. + . +.+ -.++
T Consensus 40 Gy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anl 118 (433)
T PLN03016 40 GYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK-MANI 118 (433)
T ss_pred EEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh-cCcE
Confidence 355663 3455553 222 22359999999999877432211 1 1 112 2678
Q ss_pred EEeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEEEccCHHHHHHHHHh----C------Cc
Q 025988 56 IAPD-YRGYGLSDPPAEPEKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALL----H------PE 117 (245)
Q Consensus 56 ia~d-~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~ 117 (245)
+-+| .-|.|.|.........+-.+.++++..++..+ ...+++|.|.|.||..+-.+|.. . +-
T Consensus 119 lfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~i 198 (433)
T PLN03016 119 IFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPI 198 (433)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcc
Confidence 9999 55888886433211111122335666555442 34679999999999977776654 1 12
Q ss_pred ceeEEEEeCCC
Q 025988 118 RVSGVITLGVP 128 (245)
Q Consensus 118 ~v~~lv~~~~~ 128 (245)
.++|+++-++.
T Consensus 199 nLkGi~iGNg~ 209 (433)
T PLN03016 199 NLQGYMLGNPV 209 (433)
T ss_pred cceeeEecCCC
Confidence 57788877654
No 193
>PLN00413 triacylglycerol lipase
Probab=95.77 E-value=0.025 Score=51.09 Aligned_cols=51 Identities=33% Similarity=0.488 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh---C-----CcceeEEEEeCCCC
Q 025988 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL---H-----PERVSGVITLGVPF 129 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~---~-----p~~v~~lv~~~~~~ 129 (245)
++.+.+.++++.....++++.|||+||.+|..+|.. + ..++.++...+.|-
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 456677777777777789999999999999987743 1 22455666666653
No 194
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.74 E-value=0.16 Score=46.04 Aligned_cols=107 Identities=17% Similarity=0.202 Sum_probs=78.1
Q ss_pred CCceEEEEcCCCCCccchH-----HHHHHHHHCCcEEEEeCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCC
Q 025988 24 GPNVVVFLHGFPEIWYSWR-----HQMVAVAAAGFRAIAPDYRGYGLSDPPAEP-----EKASFKDITNDLLATLDHLGI 93 (245)
Q Consensus 24 ~~~~vl~lHG~~~~~~~~~-----~~~~~l~~~g~~via~d~~G~G~s~~~~~~-----~~~~~~~~~~~i~~~l~~l~~ 93 (245)
+.|..|+|-|=+.....|- .......+.|-.|+-.++|=||.|....+. ..-+.++...|+.+++++++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 3337788877655444441 223333455889999999999988543222 224677888899999988722
Q ss_pred -------CcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 94 -------NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 94 -------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.+.+..|-|.-|.++.-+=..+|+.+.+.|.-++|..
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 2789999999999998888899999999998887754
No 195
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.68 E-value=0.058 Score=48.88 Aligned_cols=103 Identities=19% Similarity=0.180 Sum_probs=70.7
Q ss_pred CceEEEEcCCCCCccchHHHHHH-------------------HHHCCcEEEEeC-CCCCCCCCCCCCCCCCCHHHHHHHH
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVA-------------------VAAAGFRAIAPD-YRGYGLSDPPAEPEKASFKDITNDL 84 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~-------------------l~~~g~~via~d-~~G~G~s~~~~~~~~~~~~~~~~~i 84 (245)
.|.++.+.|.|+++..|-.+.+. +.+ .-.+|-+| .-|.|.|....+....+.....+|+
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcccccccccccchhccchhH
Confidence 45899999999999888765321 111 13578888 5588888764444455677777777
Q ss_pred HHHHHHh---------CCCcEEEEEEccCHHHHHHHHHhCCc---ceeEEEEeCCC
Q 025988 85 LATLDHL---------GINKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGVP 128 (245)
Q Consensus 85 ~~~l~~l---------~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~ 128 (245)
..+++.+ ..++.+|+|-|.||.-+-.+|..--+ ..+++|.+++.
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 7776544 23589999999999999888866433 35555555443
No 196
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.66 E-value=0.026 Score=36.66 Aligned_cols=38 Identities=21% Similarity=0.369 Sum_probs=21.0
Q ss_pred CceeEEEE-CCEEEEEEec--CC-------CCceEEEEcCCCCCccch
Q 025988 4 IEHKYIKV-QGLNLHVAET--GT-------GPNVVVFLHGFPEIWYSW 41 (245)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~--g~-------~~~~vl~lHG~~~~~~~~ 41 (245)
.+.+.|++ ||.-+....- ++ ++|+|+|.||+.+++..|
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 35566777 8877665432 12 245999999999999988
No 197
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.52 E-value=0.018 Score=50.68 Aligned_cols=86 Identities=16% Similarity=0.167 Sum_probs=53.6
Q ss_pred ceEEEEcCCCC-CccchHHHHHHHHHCCcEEEEeCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q 025988 26 NVVVFLHGFPE-IWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPP-AEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (245)
Q Consensus 26 ~~vl~lHG~~~-~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~-~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~ 103 (245)
..||+.||+-+ +...|...+.....+ +.=..+..+|+-..... .+.-..--+.+++++.+.+....++++.+||||.
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSL 159 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSL 159 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeec
Confidence 48999999987 677788877777654 32223334443222111 1111112233566667777667789999999999
Q ss_pred CHHHHHHHH
Q 025988 104 GARPAYLFA 112 (245)
Q Consensus 104 Gg~~a~~~a 112 (245)
||.++..+.
T Consensus 160 GGLvar~AI 168 (405)
T KOG4372|consen 160 GGLVARYAI 168 (405)
T ss_pred CCeeeeEEE
Confidence 999886433
No 198
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.50 E-value=0.059 Score=50.09 Aligned_cols=105 Identities=20% Similarity=0.199 Sum_probs=61.6
Q ss_pred CceEEEEcCCC---CCccchHHH--HHHHHHCCcEEEEeCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhC
Q 025988 25 PNVVVFLHGFP---EIWYSWRHQ--MVAVAAAGFRAIAPDYR----GYGLSDPPAEPEKASFKDITNDLLATLD---HLG 92 (245)
Q Consensus 25 ~~~vl~lHG~~---~~~~~~~~~--~~~l~~~g~~via~d~~----G~G~s~~~~~~~~~~~~~~~~~i~~~l~---~l~ 92 (245)
-|++|++||.+ ++...+... ...+.....-|+++..| |+..+........+.+.++...+.-+-+ .+|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 45999999985 333223111 12233334667777776 4333322222345666666655544444 443
Q ss_pred --CCcEEEEEEccCHHHHHHHHHh--CCcceeEEEEeCCCC
Q 025988 93 --INKVFLVAKDFGARPAYLFALL--HPERVSGVITLGVPF 129 (245)
Q Consensus 93 --~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~~ 129 (245)
.++|+++|||.||..+..+... ...++.++|.+++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 5689999999999999766543 124577777776553
No 199
>PLN02454 triacylglycerol lipase
Probab=95.40 E-value=0.038 Score=49.20 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhCCC--cEEEEEEccCHHHHHHHHHh
Q 025988 80 ITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 114 (245)
+...|..+++..... ++++.|||+||.+|...|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 333444455544433 49999999999999988754
No 200
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.38 E-value=0.058 Score=47.11 Aligned_cols=40 Identities=35% Similarity=0.483 Sum_probs=32.4
Q ss_pred CCCcEEEEEEccCHHHHHHHHHhCCc-----ceeEEEEeCCCCCC
Q 025988 92 GINKVFLVAKDFGARPAYLFALLHPE-----RVSGVITLGVPFIP 131 (245)
Q Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~~~~ 131 (245)
|.+++.|||||+|+.+.+.....-.+ .|+.+++++.|...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 77789999999999999876655443 48999999987654
No 201
>PLN02571 triacylglycerol lipase
Probab=95.30 E-value=0.026 Score=50.28 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhCCC--cEEEEEEccCHHHHHHHHHh
Q 025988 78 KDITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 114 (245)
+++.++|..+++....+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666777777766443 68999999999999988765
No 202
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=94.87 E-value=0.023 Score=52.32 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=75.2
Q ss_pred eeEEEE-CCEEEEEEecC-----CCCceEEEEcCCCCC----ccchHHHHHHHHHCCcEEEEeCCCCCCCCCCC--CCCC
Q 025988 6 HKYIKV-QGLNLHVAETG-----TGPNVVVFLHGFPEI----WYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPP--AEPE 73 (245)
Q Consensus 6 ~~~~~~-~g~~~~~~~~g-----~~~~~vl~lHG~~~~----~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~--~~~~ 73 (245)
+...+. ||++|.|...+ +..|++ |||+++- -..+...+..+.++|...+..++||=|+=... ...-
T Consensus 396 Q~~atSkDGT~IPYFiv~K~~~~d~~pTl--l~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~ 473 (648)
T COG1505 396 QFFATSKDGTRIPYFIVRKGAKKDENPTL--LYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGM 473 (648)
T ss_pred EEEEEcCCCccccEEEEecCCcCCCCceE--EEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHh
Confidence 344444 99999986543 112354 4554431 12244555666678889999999997764321 0001
Q ss_pred CCCHHHHHHHHHHHHHHh---CC---CcEEEEEEccCHHHHHHHHHhCCcceeEEEEe
Q 025988 74 KASFKDITNDLLATLDHL---GI---NKVFLVAKDFGARPAYLFALLHPERVSGVITL 125 (245)
Q Consensus 74 ~~~~~~~~~~i~~~l~~l---~~---~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~ 125 (245)
.-+.....+|..++.+.| |+ +++.+-|-|-||.+.-....++||.+.++|+-
T Consensus 474 k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~e 531 (648)
T COG1505 474 KENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCE 531 (648)
T ss_pred hhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeec
Confidence 123344556666666665 44 57899999999999988888999988887753
No 203
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.81 E-value=0.064 Score=43.39 Aligned_cols=70 Identities=16% Similarity=0.110 Sum_probs=43.1
Q ss_pred HHHHHHCCcEEEEeCCCCCCCCCCC---CCC----CCCCHHHHHHHHHHHHHHhC-CCcEEEEEEccCHHHHHHHHHhC
Q 025988 45 MVAVAAAGFRAIAPDYRGYGLSDPP---AEP----EKASFKDITNDLLATLDHLG-INKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 45 ~~~l~~~g~~via~d~~G~G~s~~~---~~~----~~~~~~~~~~~i~~~l~~l~-~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
+..|... .+|+||-.|-....... .+. ......+..+....+|++.+ .++++|+|||.|+.+..++..+.
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3445544 78999988743222111 110 11223344444555666664 46899999999999999998775
No 204
>PLN02408 phospholipase A1
Probab=94.80 E-value=0.046 Score=47.99 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEEccCHHHHHHHHHh
Q 025988 79 DITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 114 (245)
++.+.|..+++..+.+ ++++.|||+||.+|...|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455666777766543 59999999999999987765
No 205
>PLN02310 triacylglycerol lipase
Probab=94.74 E-value=0.079 Score=47.17 Aligned_cols=51 Identities=18% Similarity=0.306 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhC----CCcEEEEEEccCHHHHHHHHHh----CCcceeEEEEeCCC
Q 025988 78 KDITNDLLATLDHLG----INKVFLVAKDFGARPAYLFALL----HPERVSGVITLGVP 128 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~----~~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lv~~~~~ 128 (245)
+++.+.|..+++.+. .-+++++|||+||.+|...|.. .+...-.++..+.|
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsP 247 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAP 247 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCC
Confidence 445566677776653 2379999999999999887744 33332335555555
No 206
>PLN02934 triacylglycerol lipase
Probab=94.69 E-value=0.1 Score=47.62 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHH
Q 025988 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLFAL 113 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~ 113 (245)
.++.+.+.++++.....++++.|||+||.+|..++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345666777777777779999999999999998874
No 207
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.62 E-value=0.1 Score=46.35 Aligned_cols=112 Identities=13% Similarity=0.165 Sum_probs=81.8
Q ss_pred EEEEecCCCCceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhC--
Q 025988 16 LHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPA-EPEKASFKDITNDLLATLDHLG-- 92 (245)
Q Consensus 16 ~~~~~~g~~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~-~~~~~~~~~~~~~i~~~l~~l~-- 92 (245)
+.....+...|+|+..-|+.-+..-.+.-...|.+ -+-+.+..|=+|.|...+ +-..-++++-|.|...+.+.+.
T Consensus 54 vtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 54 VTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred EEEEEcCCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh
Confidence 33444443445888889987654434332333433 478899999999996533 3234589999999998888773
Q ss_pred -CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 93 -INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 93 -~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
..+.+--|-|-||+.++..=..+|+.|++.|..-.|.
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 3688999999999999988888999999999766654
No 208
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.48 E-value=0.073 Score=49.25 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=62.2
Q ss_pred CceEEEEcCCC----CCcc--chHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------H
Q 025988 25 PNVVVFLHGFP----EIWY--SWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD--------H 90 (245)
Q Consensus 25 ~~~vl~lHG~~----~~~~--~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~--------~ 90 (245)
.|.++++||.+ .+.. .|..+.....+. ..|.++|++-- -...++..-++.+..+.. +
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~--------igG~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNP--------IGGANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCC--------CCCcchHHHHHHHHHHhhhhhhhhhcc
Confidence 34899999998 1222 244444433332 55667777621 012455555666555554 3
Q ss_pred hCCCcEEEEEEccCHHHHHHHHHhCC-cceeEEEEeCCCCCC
Q 025988 91 LGINKVFLVAKDFGARPAYLFALLHP-ERVSGVITLGVPFIP 131 (245)
Q Consensus 91 l~~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lv~~~~~~~~ 131 (245)
+...+++|+|.|||+.++-......- ..|+++|+|+-++..
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~ 288 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT 288 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccC
Confidence 45678999999999888877665543 359999999877653
No 209
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.17 E-value=0.21 Score=40.68 Aligned_cols=78 Identities=21% Similarity=0.361 Sum_probs=50.8
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEE-EeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccC
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAI-APDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~vi-a~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~G 104 (245)
..|||+.||+.+...+.++. + ..++.|+ +.|.|..-. +. | --+.+++.||++|||
T Consensus 12 ~LilfF~GWg~d~~~f~hL~--~-~~~~D~l~~yDYr~l~~----------d~-----~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 12 ELILFFAGWGMDPSPFSHLI--L-PENYDVLICYDYRDLDF----------DF-----D------LSGYREIYLVAWSMG 67 (213)
T ss_pred eEEEEEecCCCChHHhhhcc--C-CCCccEEEEecCccccc----------cc-----c------cccCceEEEEEEeHH
Confidence 49999999999977766652 1 2346654 668772211 00 1 124689999999999
Q ss_pred HHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 105 ARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 105 g~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
--+|-++....| ++..|.+++..
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCC
Confidence 999988765443 45555555543
No 210
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.15 E-value=0.51 Score=42.86 Aligned_cols=121 Identities=15% Similarity=0.105 Sum_probs=74.6
Q ss_pred eEEEEC---CEEEEEEe--cC---CCCceEEEEcCCCCCccchHHHHHHHH------------------HCCcEEEEeCC
Q 025988 7 KYIKVQ---GLNLHVAE--TG---TGPNVVVFLHGFPEIWYSWRHQMVAVA------------------AAGFRAIAPDY 60 (245)
Q Consensus 7 ~~~~~~---g~~~~~~~--~g---~~~~~vl~lHG~~~~~~~~~~~~~~l~------------------~~g~~via~d~ 60 (245)
-+++++ +..++|.- .. +..|.||.|-|.|+++..- -+...+. .+--+++-+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 467775 67777743 22 2235999999999987654 2222211 01245777777
Q ss_pred C-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCCcEEEEEEccCHHHHHHHHHh----C------CcceeE
Q 025988 61 R-GYGLSDPPAEP-EKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALL----H------PERVSG 121 (245)
Q Consensus 61 ~-G~G~s~~~~~~-~~~~~~~~~~~i~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~~ 121 (245)
| |-|.|-..... ...+-+..|+|+..+|... .-+++.|.|-|.+|...-.+|.. . +-.++|
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 6 66766533211 1235566777877777543 45689999999999777666644 2 125778
Q ss_pred EEEeCCC
Q 025988 122 VITLGVP 128 (245)
Q Consensus 122 lv~~~~~ 128 (245)
+++-++.
T Consensus 206 ~~IGNg~ 212 (454)
T KOG1282|consen 206 YAIGNGL 212 (454)
T ss_pred EEecCcc
Confidence 7765544
No 211
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.10 E-value=0.33 Score=42.04 Aligned_cols=76 Identities=14% Similarity=0.072 Sum_probs=49.3
Q ss_pred cEEEEeCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEEEccCHHHHHHHHHhC---------
Q 025988 53 FRAIAPDYR-GYGLSDPPAEPEKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALLH--------- 115 (245)
Q Consensus 53 ~~via~d~~-G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~--------- 115 (245)
.+++-+|.| |-|.|-........+-+..++|+..+|..+ .-.+++|.|-|.||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899988 888885432211122223446776666553 446799999999999877776541
Q ss_pred -CcceeEEEEeCCC
Q 025988 116 -PERVSGVITLGVP 128 (245)
Q Consensus 116 -p~~v~~lv~~~~~ 128 (245)
+-.++|+++-++-
T Consensus 82 ~~inLkGi~IGNg~ 95 (319)
T PLN02213 82 PPINLQGYMLGNPV 95 (319)
T ss_pred CceeeeEEEeCCCC
Confidence 1257787776643
No 212
>PLN02324 triacylglycerol lipase
Probab=93.95 E-value=0.083 Score=47.11 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEEccCHHHHHHHHHh
Q 025988 79 DITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 114 (245)
++.+.|..+++....+ ++++.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3455566677666432 69999999999999987754
No 213
>PLN02802 triacylglycerol lipase
Probab=93.88 E-value=0.089 Score=47.94 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCC--CcEEEEEEccCHHHHHHHHHh
Q 025988 79 DITNDLLATLDHLGI--NKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~--~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
++.++|..+++.... .++++.|||+||.+|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 455566667766643 268999999999999987765
No 214
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=93.83 E-value=0.049 Score=50.61 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=61.3
Q ss_pred eEEEEcCCCCC--ccchHHHHHHHHHCCcEEEEeCCCCCCCCCCC--CCC----CCCCHHHHHHHHHHHHHH--hCCCcE
Q 025988 27 VVVFLHGFPEI--WYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPP--AEP----EKASFKDITNDLLATLDH--LGINKV 96 (245)
Q Consensus 27 ~vl~lHG~~~~--~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~--~~~----~~~~~~~~~~~i~~~l~~--l~~~~~ 96 (245)
.+|..+|.-+- -..|+.---.|.+.|+.....|.||=|.-... ++. ...+++++.....-+++. ...++.
T Consensus 472 ~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL 551 (712)
T KOG2237|consen 472 LLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKL 551 (712)
T ss_pred eEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccce
Confidence 66666664322 12354433345567877777899996654321 111 123444444444444432 144689
Q ss_pred EEEEEccCHHHHHHHHHhCCcceeEEEE
Q 025988 97 FLVAKDFGARPAYLFALLHPERVSGVIT 124 (245)
Q Consensus 97 ~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 124 (245)
.+.|.|.||.++......+|+.+.++|+
T Consensus 552 ~i~G~SaGGlLvga~iN~rPdLF~avia 579 (712)
T KOG2237|consen 552 AIEGGSAGGLLVGACINQRPDLFGAVIA 579 (712)
T ss_pred eEecccCccchhHHHhccCchHhhhhhh
Confidence 9999999999999999999999888775
No 215
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.61 E-value=0.18 Score=46.15 Aligned_cols=37 Identities=11% Similarity=0.174 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhC----CCcEEEEEEccCHHHHHHHHHh
Q 025988 78 KDITNDLLATLDHLG----INKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~----~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
+++.++|..+++.+. ..++++.|||+||.+|...|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345567777776653 2369999999999999987754
No 216
>PLN02753 triacylglycerol lipase
Probab=93.51 E-value=0.11 Score=47.64 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhCC-----CcEEEEEEccCHHHHHHHHHh
Q 025988 78 KDITNDLLATLDHLGI-----NKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~~-----~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
+++.+.|..+++..+. -++++.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3345556666665532 489999999999999988753
No 217
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.09 E-value=0.24 Score=46.42 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=66.4
Q ss_pred eEEEEcCCCCCcc--chHHHHHHHHHCCcEEEEeCCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHh--CCCcE
Q 025988 27 VVVFLHGFPEIWY--SWRHQMVAVAAAGFRAIAPDYRGYGLSDPP------AEPEKASFKDITNDLLATLDHL--GINKV 96 (245)
Q Consensus 27 ~vl~lHG~~~~~~--~~~~~~~~l~~~g~~via~d~~G~G~s~~~------~~~~~~~~~~~~~~i~~~l~~l--~~~~~ 96 (245)
++|..=|.-+... .+....-.|.++|+-....-.||=|.-... ......++.++.+....++++= ..+++
T Consensus 450 ~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i 529 (682)
T COG1770 450 LLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRI 529 (682)
T ss_pred EEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccce
Confidence 6666666533222 233333456678887777788886654322 0112345666555555555432 34579
Q ss_pred EEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 97 FLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 97 ~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
+++|-|.||++....+...|+.++++|+- .|+.
T Consensus 530 ~a~GGSAGGmLmGav~N~~P~lf~~iiA~-VPFV 562 (682)
T COG1770 530 VAIGGSAGGMLMGAVANMAPDLFAGIIAQ-VPFV 562 (682)
T ss_pred EEeccCchhHHHHHHHhhChhhhhheeec-CCcc
Confidence 99999999999999999999999998864 4443
No 218
>PLN02719 triacylglycerol lipase
Probab=92.99 E-value=0.14 Score=46.71 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCC-----CcEEEEEEccCHHHHHHHHHh
Q 025988 79 DITNDLLATLDHLGI-----NKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~-----~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
++.+.|..+++.... .++++.|||+||.+|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555666665532 379999999999999987754
No 219
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.70 E-value=0.22 Score=39.01 Aligned_cols=113 Identities=16% Similarity=0.136 Sum_probs=63.5
Q ss_pred EEEEEEecC-CCCceEEEEcCCCCCccchHHH--HHHHH---HCC-cEEEEeCCCCCCCCCCCCCCCCCCHHHHHH---H
Q 025988 14 LNLHVAETG-TGPNVVVFLHGFPEIWYSWRHQ--MVAVA---AAG-FRAIAPDYRGYGLSDPPAEPEKASFKDITN---D 83 (245)
Q Consensus 14 ~~~~~~~~g-~~~~~vl~lHG~~~~~~~~~~~--~~~l~---~~g-~~via~d~~G~G~s~~~~~~~~~~~~~~~~---~ 83 (245)
..+.+...| .|. +||++.--.+.-..+..+ +..|+ +.| ...++++-. ...+--. ...+..+-++ .
T Consensus 15 RdMel~ryGHaG~-pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gl--dsESf~a--~h~~~adr~~rH~A 89 (227)
T COG4947 15 RDMELNRYGHAGI-PVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGL--DSESFLA--THKNAADRAERHRA 89 (227)
T ss_pred chhhhhhccCCCC-cEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEeccc--chHhHhh--hcCCHHHHHHHHHH
Confidence 445566667 455 666666655554444432 33332 233 344454422 1111000 0111112121 2
Q ss_pred HH-HHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCCCC
Q 025988 84 LL-ATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 84 i~-~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 131 (245)
.. -++++.-..+.++-|-||||..|..+..++|+.+.++|.+++.+..
T Consensus 90 yerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 90 YERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 22 2333333345778899999999999999999999999999988754
No 220
>PLN02761 lipase class 3 family protein
Probab=92.70 E-value=0.17 Score=46.35 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhC------CCcEEEEEEccCHHHHHHHHHh
Q 025988 78 KDITNDLLATLDHLG------INKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~------~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
+++.+.|..+++..+ .-++++.|||+||.+|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 345556666666652 1369999999999999987743
No 221
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.97 E-value=0.77 Score=42.66 Aligned_cols=51 Identities=24% Similarity=0.390 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHh-----C-CCcEEEEEEccCHHHHHHHHHh-----CCc------ceeEEEEeCCCC
Q 025988 79 DITNDLLATLDHL-----G-INKVFLVAKDFGARPAYLFALL-----HPE------RVSGVITLGVPF 129 (245)
Q Consensus 79 ~~~~~i~~~l~~l-----~-~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lv~~~~~~ 129 (245)
.++....++++.+ | -++++.|||||||.++=.+... .|+ ...|+|+++.|-
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3444444444443 4 3478889999999988766544 233 467889988874
No 222
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=91.28 E-value=0.3 Score=42.70 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh
Q 025988 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
..+.+++..+++...--++.+.|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677788888888887789999999999999887755
No 223
>PLN02847 triacylglycerol lipase
Probab=91.19 E-value=0.37 Score=44.88 Aligned_cols=23 Identities=22% Similarity=0.293 Sum_probs=19.0
Q ss_pred CCCcEEEEEEccCHHHHHHHHHh
Q 025988 92 GINKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
.--+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33479999999999999887765
No 224
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=90.87 E-value=4.4 Score=28.79 Aligned_cols=84 Identities=17% Similarity=0.074 Sum_probs=54.8
Q ss_pred chHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCH--HHHHHHHHhCCc
Q 025988 40 SWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA--RPAYLFALLHPE 117 (245)
Q Consensus 40 ~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg--~~a~~~a~~~p~ 117 (245)
.+..+.+.+..+||..=.+.++.+|.+....-.... .+.=...+..+++.+...++++||-|=-. -+-..+|..+|+
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~-~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGA-EEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCc-hhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 344555566667788888888888665332110111 12334567888888888999999965322 333457888999
Q ss_pred ceeEEEE
Q 025988 118 RVSGVIT 124 (245)
Q Consensus 118 ~v~~lv~ 124 (245)
+|.++.+
T Consensus 91 ~i~ai~I 97 (100)
T PF09949_consen 91 RILAIYI 97 (100)
T ss_pred CEEEEEE
Confidence 9999865
No 225
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.60 E-value=1 Score=38.84 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=63.4
Q ss_pred CCCceEEEEcCCCCCccc----hHHHHH-----------HHHHCCcEEEEeCCC-CCCCCCCCC-CCCCCCHHHHHHHHH
Q 025988 23 TGPNVVVFLHGFPEIWYS----WRHQMV-----------AVAAAGFRAIAPDYR-GYGLSDPPA-EPEKASFKDITNDLL 85 (245)
Q Consensus 23 ~~~~~vl~lHG~~~~~~~----~~~~~~-----------~l~~~g~~via~d~~-G~G~s~~~~-~~~~~~~~~~~~~i~ 85 (245)
..+|..+.+.|.|+.+.. ++.+-+ .| + ...++-+|-| |-|.|--.- .....+.++++.|+.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl-k-~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL-K-DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh-h-hccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 345589999999865543 333321 12 2 2567777766 778775432 222346888999999
Q ss_pred HHHHHh-------CCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 86 ATLDHL-------GINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 86 ~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
++++.+ .-.+++|+..|.||-+|..++...-
T Consensus 107 ~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~ 144 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELD 144 (414)
T ss_pred HHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHH
Confidence 999876 4457999999999999998887643
No 226
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.48 E-value=2.3 Score=34.94 Aligned_cols=80 Identities=19% Similarity=0.176 Sum_probs=45.0
Q ss_pred CcEEEEeCCCC-CCC-CCCCCCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEEEccCHHHHHHHHHhC-----Cc-ceeE
Q 025988 52 GFRAIAPDYRG-YGL-SDPPAEPEKASFKDITNDLLATLDHL--GINKVFLVAKDFGARPAYLFALLH-----PE-RVSG 121 (245)
Q Consensus 52 g~~via~d~~G-~G~-s~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~-----p~-~v~~ 121 (245)
|+.+..++.|. ++- +.........+..+=++.+.+.++.. .-++++++|+|+|+.++...+.+. +. ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 56777777775 111 11111112334555455555555442 346899999999999998766553 11 2345
Q ss_pred EEEeCCCCCC
Q 025988 122 VITLGVPFIP 131 (245)
Q Consensus 122 lv~~~~~~~~ 131 (245)
+|+++-|-.+
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 6777665433
No 227
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=90.46 E-value=2.9 Score=34.36 Aligned_cols=99 Identities=17% Similarity=0.128 Sum_probs=61.4
Q ss_pred eEEEEcCCCCCccc-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---cEEEEEEc
Q 025988 27 VVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN---KVFLVAKD 102 (245)
Q Consensus 27 ~vl~lHG~~~~~~~-~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~---~~~lvGhS 102 (245)
|+|++=||.++... ..+..+...+.|++++.+-.+-...... ...+...++.+.+.+...... ++++-.+|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FS 75 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWP-----SKRLAPAADKLLELLSDSQSASPPPILFHSFS 75 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeee-----ccchHHHHHHHHHHhhhhccCCCCCEEEEEEE
Confidence 46777888765433 3444455555799999887663222111 134555666666666655433 79999999
Q ss_pred cCHHHHHHHHHh----C------CcceeEEEEeCCCCC
Q 025988 103 FGARPAYLFALL----H------PERVSGVITLGVPFI 130 (245)
Q Consensus 103 ~Gg~~a~~~a~~----~------p~~v~~lv~~~~~~~ 130 (245)
.||...+..... . -.+++++|+=++|..
T Consensus 76 nGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 76 NGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred CchHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 988887764431 1 124888888777644
No 228
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=90.29 E-value=1.4 Score=44.51 Aligned_cols=93 Identities=15% Similarity=0.152 Sum_probs=65.8
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCcEEEEEEcc
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG-INKVFLVAKDF 103 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~-~~~~~lvGhS~ 103 (245)
.|++.|+|-.-+.......++..|. .|.||...... ....+++..++-...-++.+. ..+..++|+|+
T Consensus 2123 ~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~-vP~dSies~A~~yirqirkvQP~GPYrl~GYSy 2191 (2376)
T KOG1202|consen 2123 EPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEA-VPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSY 2191 (2376)
T ss_pred CCceEEEeccccchHHHHHHHhhcC----------Ccchhhhcccc-CCcchHHHHHHHHHHHHHhcCCCCCeeeeccch
Confidence 3499999998887777766655542 34445432221 224688988888777777775 45899999999
Q ss_pred CHHHHHHHHHhCC--cceeEEEEeCCC
Q 025988 104 GARPAYLFALLHP--ERVSGVITLGVP 128 (245)
Q Consensus 104 Gg~~a~~~a~~~p--~~v~~lv~~~~~ 128 (245)
|+.++..+|.... +....+|++++.
T Consensus 2192 G~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2192 GACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred hHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 9999999987643 345668888875
No 229
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.99 E-value=3 Score=38.29 Aligned_cols=41 Identities=29% Similarity=0.342 Sum_probs=32.5
Q ss_pred hCCCcEEEEEEccCHHHHHHHHHh-----CCcceeEEEEeCCCCCC
Q 025988 91 LGINKVFLVAKDFGARPAYLFALL-----HPERVSGVITLGVPFIP 131 (245)
Q Consensus 91 l~~~~~~lvGhS~Gg~~a~~~a~~-----~p~~v~~lv~~~~~~~~ 131 (245)
+|.+++.+||+|.|+.+....... .-+.|..++++++|...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 488999999999999998854432 23479999999988754
No 230
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=84.14 E-value=2.4 Score=38.96 Aligned_cols=83 Identities=18% Similarity=0.201 Sum_probs=55.1
Q ss_pred HHHHHHHCCcEEEEeCCCCCCCCCC--CCCCCCCC-----------HHHHHHHHHHHHHHh---CCCcEEEEEEccCHHH
Q 025988 44 QMVAVAAAGFRAIAPDYRGYGLSDP--PAEPEKAS-----------FKDITNDLLATLDHL---GINKVFLVAKDFGARP 107 (245)
Q Consensus 44 ~~~~l~~~g~~via~d~~G~G~s~~--~~~~~~~~-----------~~~~~~~i~~~l~~l---~~~~~~lvGhS~Gg~~ 107 (245)
+...+. .||.+++-|- ||..+.. ... ...+ +..++.--.++++.+ ..++-+..|.|-||.-
T Consensus 52 ~~~~~~-~G~A~~~TD~-Gh~~~~~~~~~~-~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRq 128 (474)
T PF07519_consen 52 MATALA-RGYATASTDS-GHQGSAGSDDAS-FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQ 128 (474)
T ss_pred cchhhh-cCeEEEEecC-CCCCCccccccc-ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcch
Confidence 344554 6999999985 4444322 111 1122 223333333445444 4567899999999999
Q ss_pred HHHHHHhCCcceeEEEEeCCCC
Q 025988 108 AYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 108 a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
++..|.++|+.++++|.-+|++
T Consensus 129 gl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 129 GLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHhChhhcCeEEeCCchH
Confidence 9999999999999999887764
No 231
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=83.50 E-value=14 Score=31.83 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=71.2
Q ss_pred ceEEEEcCCCCCccc-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccC
Q 025988 26 NVVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~-~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~G 104 (245)
|.||++--+.++... .+..++.|... ..|+.-|+-.-- --|-.....+++++++-+.+.+..+|.+ +++++-+.=
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr--~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDAR--MVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccc--eeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 356677666655443 56677777654 778888876321 2233345688999999999999999976 777777776
Q ss_pred HHHHHH-----HHHhCCcceeEEEEeCCCCCC
Q 025988 105 ARPAYL-----FALLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 105 g~~a~~-----~a~~~p~~v~~lv~~~~~~~~ 131 (245)
+.-.+. -+...|...+.++++++|+..
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 654333 333467788999999998754
No 232
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=80.50 E-value=12 Score=30.08 Aligned_cols=68 Identities=24% Similarity=0.220 Sum_probs=47.8
Q ss_pred HHHCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcc----CHHHHHHHHHhCC-cceeE
Q 025988 48 VAAAGF-RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF----GARPAYLFALLHP-ERVSG 121 (245)
Q Consensus 48 l~~~g~-~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~ 121 (245)
+...|. +|+..|.++ ...|+.+.+++.+.+++++.+ -.++++|+|. |.-++-++|++.- ..+..
T Consensus 72 l~~~G~d~V~~~~~~~---------~~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsd 141 (202)
T cd01714 72 ALAMGADRAILVSDRA---------FAGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITY 141 (202)
T ss_pred HHHcCCCEEEEEeccc---------ccCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccce
Confidence 333454 566665542 235788899999999998888 5789999988 8889988887742 24555
Q ss_pred EEEe
Q 025988 122 VITL 125 (245)
Q Consensus 122 lv~~ 125 (245)
++-+
T Consensus 142 v~~l 145 (202)
T cd01714 142 VSKI 145 (202)
T ss_pred EEEE
Confidence 5544
No 233
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=77.52 E-value=8.1 Score=36.25 Aligned_cols=97 Identities=21% Similarity=0.241 Sum_probs=55.7
Q ss_pred eEEEEcCCC---CCccchHHHHHHHH-HCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhC--CCcEE
Q 025988 27 VVVFLHGFP---EIWYSWRHQMVAVA-AAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL---DHLG--INKVF 97 (245)
Q Consensus 27 ~vl~lHG~~---~~~~~~~~~~~~l~-~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l---~~l~--~~~~~ 97 (245)
.|+-+||.+ +++.+-......++ ..|..|+.+|+- -.|..+.....++.--...-++ +.+| .++|+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYS-----LAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYS-----LAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeec-----cCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 688899986 23222222222222 337899999964 4454444444554333333333 3344 37999
Q ss_pred EEEEccCHHHHHHHHHh----CCcceeEEEEeCCC
Q 025988 98 LVAKDFGARPAYLFALL----HPERVSGVITLGVP 128 (245)
Q Consensus 98 lvGhS~Gg~~a~~~a~~----~p~~v~~lv~~~~~ 128 (245)
++|-|.||.+.+..+.+ .-...+|+++.=+|
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 99999999876554443 33345677765444
No 234
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.51 E-value=3.9 Score=34.50 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=59.4
Q ss_pred EEEEcCCCCCccchH-HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHHH------HhC
Q 025988 28 VVFLHGFPEIWYSWR-HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDL--------LATLD------HLG 92 (245)
Q Consensus 28 vl~lHG~~~~~~~~~-~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i--------~~~l~------~l~ 92 (245)
-|++-|-++..+.=+ .+...+.+.+...+.+.-|=||+...+.. ....++. +.|+ .++.. ..|
T Consensus 116 OG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q-~~~~Le~-vtDlf~mG~A~I~E~~~lf~Ws~~~g 193 (371)
T KOG1551|consen 116 CLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQ-IIHMLEY-VTDLFKMGRATIQEFVKLFTWSSADG 193 (371)
T ss_pred eEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHH-HHHHHHH-HHHHHHhhHHHHHHHHHhcccccccC
Confidence 344444444433322 23445666788889999999998754421 1112221 2222 22222 237
Q ss_pred CCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 93 INKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
..+..++|-||||.+|......++.-|+-+=+++.
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred cccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 78999999999999999999988876665555543
No 235
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=74.56 E-value=36 Score=31.34 Aligned_cols=94 Identities=19% Similarity=0.227 Sum_probs=61.2
Q ss_pred EEEEecCC-CCceEEEEcCCCCCccchHH--HHHHHHHCCcEEE-EeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 025988 16 LHVAETGT-GPNVVVFLHGFPEIWYSWRH--QMVAVAAAGFRAI-APDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL 91 (245)
Q Consensus 16 ~~~~~~g~-~~~~vl~lHG~~~~~~~~~~--~~~~l~~~g~~vi-a~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l 91 (245)
++|...|. +||..|.+.|+-. ++-+.- ++..| |...+ .-|.|=-|.+--.- ...| -..+.+-|.+-|+.|
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlG-s~ey-E~~I~~~I~~~L~~L 352 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLG-SDEY-EQGIINVIQEKLDYL 352 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeC-cHHH-HHHHHHHHHHHHHHh
Confidence 34455553 4568999999965 454443 44444 44444 44888666653221 1122 334566677888888
Q ss_pred CCC--cEEEEEEccCHHHHHHHHHhC
Q 025988 92 GIN--KVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 92 ~~~--~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
|.+ .+++-|-|||..-|+.+++..
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccC
Confidence 765 699999999999999999875
No 236
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=72.83 E-value=6 Score=33.75 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=20.9
Q ss_pred CCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 92 GINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
.-.++.+.|||+||.+|..+...+.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 4457999999999999998887763
No 237
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=72.83 E-value=6 Score=33.75 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=20.9
Q ss_pred CCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 92 GINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
.-.++.+.|||+||.+|..+...+.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 4457999999999999998887763
No 238
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=72.60 E-value=14 Score=27.61 Aligned_cols=15 Identities=13% Similarity=0.388 Sum_probs=11.1
Q ss_pred HHHHHHHCCcEEEEe
Q 025988 44 QMVAVAAAGFRAIAP 58 (245)
Q Consensus 44 ~~~~l~~~g~~via~ 58 (245)
.+..|.+.|++|+.+
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 356677889998765
No 239
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=69.42 E-value=52 Score=27.84 Aligned_cols=88 Identities=19% Similarity=0.131 Sum_probs=48.4
Q ss_pred eEEEEcCCCCCccc------hHHHHHHH-HHCCcEEEEeCCCCCCCC--------CCC-----CCCCCCCHHHHHHHHHH
Q 025988 27 VVVFLHGFPEIWYS------WRHQMVAV-AAAGFRAIAPDYRGYGLS--------DPP-----AEPEKASFKDITNDLLA 86 (245)
Q Consensus 27 ~vl~lHG~~~~~~~------~~~~~~~l-~~~g~~via~d~~G~G~s--------~~~-----~~~~~~~~~~~~~~i~~ 86 (245)
.|||+-|...+... -..+...+ ...+-..+++=.+|-|.. ... .......++.-+.+...
T Consensus 3 iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay~ 82 (277)
T PF09994_consen 3 IVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAYR 82 (277)
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHHH
Confidence 67888887644332 23344444 222224444555666661 111 11112344444443333
Q ss_pred -HHHHh-CCCcEEEEEEccCHHHHHHHHHh
Q 025988 87 -TLDHL-GINKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 87 -~l~~l-~~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
+++.+ ..+++.++|+|-|+.+|-.++..
T Consensus 83 ~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 83 FLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 33554 35689999999999999988865
No 240
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=67.97 E-value=70 Score=28.77 Aligned_cols=98 Identities=11% Similarity=0.069 Sum_probs=62.2
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC---------------------CCCCHHHHHHHHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP---------------------EKASFKDITNDLL 85 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~---------------------~~~~~~~~~~~i~ 85 (245)
+|+++--+-.-......+.+.+.+.|..|+.+|.--.+....+.+. ....++.|++-..
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 4444433333344567777888889999999997655544332110 0112344555555
Q ss_pred HHHHHh----CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEE
Q 025988 86 ATLDHL----GINKVFLVAKDFGARPAYLFALLHPERVSGVIT 124 (245)
Q Consensus 86 ~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 124 (245)
.++..+ .++-++-+|-|.|..++.......|--+-++++
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 566555 356788899999999999888887765666554
No 241
>PRK12467 peptide synthase; Provisional
Probab=66.34 E-value=51 Score=38.64 Aligned_cols=97 Identities=11% Similarity=-0.018 Sum_probs=67.8
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCcEEEEEEcc
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG-INKVFLVAKDF 103 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~-~~~~~lvGhS~ 103 (245)
.+.|++.|...++...+..+...+.. +..++.+..++.-.... ...+++.++....+.+.... ..+..+.|+|+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~ 3766 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSL 3766 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeec
Confidence 33699999998887777777777754 57888888776533222 13467777877777776653 35789999999
Q ss_pred CHHHHHHHHHh---CCcceeEEEEeC
Q 025988 104 GARPAYLFALL---HPERVSGVITLG 126 (245)
Q Consensus 104 Gg~~a~~~a~~---~p~~v~~lv~~~ 126 (245)
||.++..++.. .-+.+.-+.++.
T Consensus 3767 g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3767 GGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred chHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99999987764 334555555553
No 242
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=65.88 E-value=6.8 Score=33.18 Aligned_cols=29 Identities=21% Similarity=0.222 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHH
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFA 112 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 112 (245)
+.+++..+|+++-.++|||+|-..|..++
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHh
Confidence 34556778999999999999999887655
No 243
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=65.63 E-value=10 Score=30.07 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=27.3
Q ss_pred eEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeC
Q 025988 27 VVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPD 59 (245)
Q Consensus 27 ~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d 59 (245)
.+|++-|..++..+ -..+...|.+.|++++..|
T Consensus 24 ~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 24 AVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred eEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 89999999988776 3445567888899999998
No 244
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=65.59 E-value=4.1 Score=35.13 Aligned_cols=29 Identities=24% Similarity=0.314 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHH
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFA 112 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 112 (245)
+.++++..|+++-.++|||+|=..|+..+
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 44666777999999999999988887543
No 245
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=64.10 E-value=18 Score=29.73 Aligned_cols=90 Identities=24% Similarity=0.215 Sum_probs=53.1
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCC--------CCCCCC--------HHHHHHHHHHHH
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPA--------EPEKAS--------FKDITNDLLATL 88 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~--------~~~~~~--------~~~~~~~i~~~l 88 (245)
-|.+++.||+.++...-......+...++.++..+...+|.+.... ...... ...+..+.....
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLG 128 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHHh
Confidence 3479999999988887655677787788888888752222221110 000011 000111111111
Q ss_pred HHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 89 DHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 89 ~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
. ..++....|.++|+..+..++...+
T Consensus 129 ~--~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 129 A--SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred h--hcCcceEEEEEeeccchHHHhhcch
Confidence 1 2267888999999999888888776
No 246
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=63.10 E-value=53 Score=23.52 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=50.0
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~-g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg 105 (245)
.||.-|| .-+......+..+... --.+.++++. ...+.+++.+.+.+.++.++...=++|=-|++|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 5788899 5555667777777654 2467777765 135788899999999988874444444446666
Q ss_pred HHHHHHHHh
Q 025988 106 RPAYLFALL 114 (245)
Q Consensus 106 ~~a~~~a~~ 114 (245)
......+..
T Consensus 69 gsp~n~a~~ 77 (116)
T PF03610_consen 69 GSPFNEAAR 77 (116)
T ss_dssp SHHHHHHHH
T ss_pred CccchHHHH
Confidence 655554443
No 247
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=62.16 E-value=8.3 Score=32.72 Aligned_cols=29 Identities=17% Similarity=0.016 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHH
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFA 112 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 112 (245)
+.+++...|+++..++|||+|=..|..++
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 44556777999999999999998887655
No 248
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=60.35 E-value=6.4 Score=31.11 Aligned_cols=33 Identities=9% Similarity=0.198 Sum_probs=25.0
Q ss_pred eEEEEcC---CCCCccchHHHHHHHHHCCcEEEEeC
Q 025988 27 VVVFLHG---FPEIWYSWRHQMVAVAAAGFRAIAPD 59 (245)
Q Consensus 27 ~vl~lHG---~~~~~~~~~~~~~~l~~~g~~via~d 59 (245)
.||++|- ...+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 5999993 34455567778888989999998764
No 249
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=58.20 E-value=10 Score=31.88 Aligned_cols=28 Identities=21% Similarity=0.333 Sum_probs=22.0
Q ss_pred HHHHHHhC-CCcEEEEEEccCHHHHHHHH
Q 025988 85 LATLDHLG-INKVFLVAKDFGARPAYLFA 112 (245)
Q Consensus 85 ~~~l~~l~-~~~~~lvGhS~Gg~~a~~~a 112 (245)
...+...+ +++..++|||+|=..|..++
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHh
Confidence 34455667 99999999999998887655
No 250
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=56.70 E-value=12 Score=32.03 Aligned_cols=34 Identities=26% Similarity=0.270 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 83 DLLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 83 ~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
-+.+.|++.+++.-.+.|-|+|+.++..+|....
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 3667777889999999999999999999988643
No 251
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=53.48 E-value=17 Score=28.08 Aligned_cols=33 Identities=21% Similarity=0.085 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
+...+++.++..-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 445555668887899999999999999888654
No 252
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=53.28 E-value=17 Score=31.30 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhC
Q 025988 83 DLLATLDHLGINKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 83 ~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
-+...+++.|+..-.++|-|+|+.++..+++..
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 466677777888779999999999999988764
No 253
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.26 E-value=27 Score=27.30 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=51.5
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcE-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccC
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFR-AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~-via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~G 104 (245)
..||.+-||+.......+++ +.+ ++. ++++|...... +.++. ..+.+.+|.+|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpe-N~dl~lcYDY~dl~l--------dfDfs-------------Ay~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPE-NHDLLLCYDYQDLNL--------DFDFS-------------AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCC-CCcEEEEeehhhcCc--------ccchh-------------hhhhhhhhhhhHH
Confidence 38999999998877776653 333 455 45778773221 11111 1256779999999
Q ss_pred HHHHHHHHHhCCcceeEEEEeCCCCC
Q 025988 105 ARPAYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 105 g~~a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
--+|-++....+ ++..+.+++...
T Consensus 68 VwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCCCC
Confidence 999998876654 566666665543
No 254
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=52.76 E-value=21 Score=26.54 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=20.3
Q ss_pred CCCceEEEEcCCCCCccchHH--HHHHHHHCC
Q 025988 23 TGPNVVVFLHGFPEIWYSWRH--QMVAVAAAG 52 (245)
Q Consensus 23 ~~~~~vl~lHG~~~~~~~~~~--~~~~l~~~g 52 (245)
+.+|.|+-+||++++..++-. +++.|-..|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 344589999999999988633 344444443
No 255
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=52.20 E-value=1.2e+02 Score=27.23 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=44.0
Q ss_pred eEEEEcCCCCCc---cchHHHHHHHHHCCcEEEEeCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCcEEE
Q 025988 27 VVVFLHGFPEIW---YSWRHQMVAVAAAGFRAIAPDYRGY--GLSDPPAEPEKASFKDITNDLLATLDH---LGINKVFL 98 (245)
Q Consensus 27 ~vl~lHG~~~~~---~~~~~~~~~l~~~g~~via~d~~G~--G~s~~~~~~~~~~~~~~~~~i~~~l~~---l~~~~~~l 98 (245)
++|++.-+.... ......+..|.+.|+.|+-|..--+ |...... ..+.+++...+...+.. +..+++.+
T Consensus 114 plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g~---~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 114 PIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKGR---LAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCCC---CCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 677777654332 2346667888888888776663322 4433221 34677888887777644 55566766
Q ss_pred EEE
Q 025988 99 VAK 101 (245)
Q Consensus 99 vGh 101 (245)
.|-
T Consensus 191 t~g 193 (390)
T TIGR00521 191 TAG 193 (390)
T ss_pred ecC
Confidence 665
No 256
>PRK10279 hypothetical protein; Provisional
Probab=52.15 E-value=17 Score=31.33 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 83 DLLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 83 ~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
-+...+++.++..-.++|-|+|+.++..+|....
T Consensus 22 GVL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 22 GVINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 3556667778888899999999999999987653
No 257
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=51.45 E-value=15 Score=29.96 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=26.6
Q ss_pred eEEEEcCC-CCCccchHHHHHHHHHCCcEEEEeC
Q 025988 27 VVVFLHGF-PEIWYSWRHQMVAVAAAGFRAIAPD 59 (245)
Q Consensus 27 ~vl~lHG~-~~~~~~~~~~~~~l~~~g~~via~d 59 (245)
.||++|.. ..+......+++.|.++||+++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 69999974 5566678888999999999998874
No 258
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=49.35 E-value=17 Score=30.63 Aligned_cols=33 Identities=9% Similarity=0.156 Sum_probs=27.6
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeC
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPD 59 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d 59 (245)
.||++|-...+......+++.|.++||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 688999777677778888999999999998874
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=48.81 E-value=22 Score=27.89 Aligned_cols=33 Identities=33% Similarity=0.290 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
+...+++.++..-.++|-|.||.++..++...+
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 444455567777789999999999999887543
No 260
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=48.36 E-value=23 Score=29.97 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=26.4
Q ss_pred HHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh
Q 025988 83 DLLATLDHLGINKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 83 ~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
-+...+++.++.--.++|-|+|+.++..+|..
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 35566677788877899999999999998876
No 261
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.21 E-value=25 Score=28.68 Aligned_cols=33 Identities=27% Similarity=0.262 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
+...+++.+++.-.++|-|.|+.++..++...+
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 344445557777789999999999999887543
No 262
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=47.98 E-value=21 Score=21.76 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEE-EccCH
Q 025988 74 KASFKDITNDLLATLDHLGINKVFLVA-KDFGA 105 (245)
Q Consensus 74 ~~~~~~~~~~i~~~l~~l~~~~~~lvG-hS~Gg 105 (245)
..+.+.+..|+...+.++.+..+.++| |+-|.
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipGsHns~t 37 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPGSHNSGT 37 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecccccccc
Confidence 356778999999999999999999988 65443
No 263
>PRK02399 hypothetical protein; Provisional
Probab=46.76 E-value=2.2e+02 Score=25.68 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=59.1
Q ss_pred EEEcCCCCCc-cchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC---------------------CCCCCHHHHHHHHHH
Q 025988 29 VFLHGFPEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE---------------------PEKASFKDITNDLLA 86 (245)
Q Consensus 29 l~lHG~~~~~-~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~---------------------~~~~~~~~~~~~i~~ 86 (245)
|++=|..++. .....+...+.+.|..|+.+|.-..|....+.+ .....++.|++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 3444554443 345556667777799999999844432211100 001113445555566
Q ss_pred HHHHh----CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEE
Q 025988 87 TLDHL----GINKVFLVAKDFGARPAYLFALLHPERVSGVIT 124 (245)
Q Consensus 87 ~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 124 (245)
++..| .++-++-+|-|.|..++.......|--+-++++
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 66543 466788899999999999888878866666554
No 264
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=46.48 E-value=1.1e+02 Score=22.11 Aligned_cols=69 Identities=19% Similarity=0.271 Sum_probs=45.5
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEEEcc-C
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLVAKDF-G 104 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~-~~~~lvGhS~-G 104 (245)
.||.-|| .-+......+..+....-.+.++++.- ..+.+++.+.+.++++.++. +.++++ -|+ |
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~-----------~~~~~~~~~~i~~~i~~~~~~~~viil-~Dl~G 68 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP-----------GESPDDLLEKIKAALAELDSGEGVLIL-TDLFG 68 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC-----------CCCHHHHHHHHHHHHHHhCCCCcEEEE-EeCCC
Confidence 5788899 445556666666654334677777761 34678888889999988864 344444 466 6
Q ss_pred HHHHH
Q 025988 105 ARPAY 109 (245)
Q Consensus 105 g~~a~ 109 (245)
|....
T Consensus 69 GSp~n 73 (122)
T cd00006 69 GSPNN 73 (122)
T ss_pred CCHHH
Confidence 65543
No 265
>COG3933 Transcriptional antiterminator [Transcription]
Probab=44.96 E-value=1.5e+02 Score=27.17 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=54.7
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~ 106 (245)
.||.-||.... .+...++..|... --+.++|+| -..+..++.+.+.+-+++.+..+=.++=-|||+.
T Consensus 111 vIiiAHG~sTA-SSmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL 177 (470)
T COG3933 111 VIIIAHGYSTA-SSMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSL 177 (470)
T ss_pred EEEEecCcchH-HHHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecchH
Confidence 79999998643 3456677777765 578999998 2467888999999999998877744555599998
Q ss_pred HHHH
Q 025988 107 PAYL 110 (245)
Q Consensus 107 ~a~~ 110 (245)
....
T Consensus 178 ~~f~ 181 (470)
T COG3933 178 TSFG 181 (470)
T ss_pred HHHH
Confidence 8765
No 266
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=44.76 E-value=44 Score=29.70 Aligned_cols=44 Identities=16% Similarity=0.215 Sum_probs=34.6
Q ss_pred HHHHHHHh---CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCC
Q 025988 84 LLATLDHL---GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 84 i~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
+.++++.. .++++++.|.|-=|-.+|..|+ ..+||++++-+...
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid 205 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVID 205 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEc
Confidence 34444444 6889999999999999999888 56789999866544
No 267
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=44.56 E-value=21 Score=33.37 Aligned_cols=31 Identities=16% Similarity=0.158 Sum_probs=24.4
Q ss_pred HHHH-HHhCCCcEEEEEEccCHHHHHHHHHhC
Q 025988 85 LATL-DHLGINKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 85 ~~~l-~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
.+++ +..|+++-.++|||+|=..|+..|--.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4455 578999999999999988888766543
No 268
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=43.52 E-value=1e+02 Score=27.81 Aligned_cols=101 Identities=19% Similarity=0.150 Sum_probs=61.6
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPP----AEPEKASFKDITNDLLATLDHLGINKVFLVAKD 102 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~----~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS 102 (245)
+|+++-=-.+..+.-....+.+.+.+.-|+-.|+.++=.--.. -..-.+.++.+++++......-....-+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 4555543333333334556778888899999998876432111 111234566666655544443334456788888
Q ss_pred cCHHHHHHHHHhCCc-ceeEEEEeCC
Q 025988 103 FGARPAYLFALLHPE-RVSGVITLGV 127 (245)
Q Consensus 103 ~Gg~~a~~~a~~~p~-~v~~lv~~~~ 127 (245)
-||.+++..++..|+ .+.+.|.+.+
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCCC
Confidence 999999999999887 4566665543
No 269
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=42.24 E-value=37 Score=32.02 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=59.7
Q ss_pred eEEEEcCCCCCccchHHHHH--------HHHHCCcEEEEeC----CCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhCC
Q 025988 27 VVVFLHGFPEIWYSWRHQMV--------AVAAAGFRAIAPD----YRGYGLSDPPAE-PEKASFKDITNDLLATLDHLGI 93 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~--------~l~~~g~~via~d----~~G~G~s~~~~~-~~~~~~~~~~~~i~~~l~~l~~ 93 (245)
++-+-=|++-.......+.+ ++.+.|=.|+.-. .+=||..+.+.. ......+.+...+.+++.. .
T Consensus 260 pLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e--~ 337 (655)
T COG3887 260 PLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE--S 337 (655)
T ss_pred ceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh--c
Confidence 67777787766666555432 1223355555542 334666555532 1122333444444444444 7
Q ss_pred CcEEEEEE------ccCHHHHHHHHHhCCcceeEEEEeCCCCCCC
Q 025988 94 NKVFLVAK------DFGARPAYLFALLHPERVSGVITLGVPFIPP 132 (245)
Q Consensus 94 ~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~ 132 (245)
++|+++|| +.|+.+++..-+..-++ .+.+.+++--..|
T Consensus 338 d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~~~p 381 (655)
T COG3887 338 DNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPEDMSP 381 (655)
T ss_pred CcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccccCh
Confidence 89999999 67999998766655554 6677777654433
No 270
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.17 E-value=31 Score=27.85 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=26.2
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
+...+.+.++.--.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 444555667766689999999999999998775
No 271
>COG0218 Predicted GTPase [General function prediction only]
Probab=40.78 E-value=38 Score=27.30 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=19.3
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025988 55 AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD 89 (245)
Q Consensus 55 via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~ 89 (245)
...+|+||||....|.. -.+.+.+-+.+.++
T Consensus 72 ~~lVDlPGYGyAkv~k~----~~e~w~~~i~~YL~ 102 (200)
T COG0218 72 LRLVDLPGYGYAKVPKE----VKEKWKKLIEEYLE 102 (200)
T ss_pred EEEEeCCCcccccCCHH----HHHHHHHHHHHHHh
Confidence 66889999999876642 23334444444443
No 272
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=39.98 E-value=36 Score=26.38 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCc
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPE 117 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~ 117 (245)
+...+++.++..=.++|-|.|+.++..++...+.
T Consensus 18 vl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 18 VLRALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 3344455577666899999999999988877543
No 273
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.67 E-value=2e+02 Score=25.47 Aligned_cols=104 Identities=13% Similarity=0.055 Sum_probs=65.4
Q ss_pred ceEEEEcCCCCCccchHHH-HHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEEEc
Q 025988 26 NVVVFLHGFPEIWYSWRHQ-MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG--INKVFLVAKD 102 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~-~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~--~~~~~lvGhS 102 (245)
.+||++=||.++.+.|... .....+.||.|+-+-.|-+-..-... ....+......-+.+++...+ ..++++--+|
T Consensus 39 k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s-~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 39 KPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSAS-RRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred ccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccc-cccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 3788888999888875443 34445668999888877543332211 112344455567777777665 5577888999
Q ss_pred cCHHHHHHHH---Hh-C-C---cceeEEEEeCCCCC
Q 025988 103 FGARPAYLFA---LL-H-P---ERVSGVITLGVPFI 130 (245)
Q Consensus 103 ~Gg~~a~~~a---~~-~-p---~~v~~lv~~~~~~~ 130 (245)
+||...+.-. .. + | +.+.+++..+.|..
T Consensus 118 ~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred CCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 9998876533 11 2 2 35666777666543
No 274
>PHA02114 hypothetical protein
Probab=38.62 E-value=51 Score=23.32 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=28.6
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeC
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPD 59 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d 59 (245)
+||+=-.+..|..-|-.++..|.+.||.|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 677777788888889999999999999999864
No 275
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.99 E-value=39 Score=28.05 Aligned_cols=24 Identities=13% Similarity=0.319 Sum_probs=16.7
Q ss_pred HHHHHh-CCCcEEEEEEccCHHHHH
Q 025988 86 ATLDHL-GINKVFLVAKDFGARPAY 109 (245)
Q Consensus 86 ~~l~~l-~~~~~~lvGhS~Gg~~a~ 109 (245)
.+++.+ .++.|++.|||+|..=..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEVDYP 250 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchhhHH
Confidence 334444 568899999999976433
No 276
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.97 E-value=55 Score=27.94 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhC---CCcEEEEEEccCHHHHHHHH---HhCCcceeEEEEeCCCCCC
Q 025988 80 ITNDLLATLDHLG---INKVFLVAKDFGARPAYLFA---LLHPERVSGVITLGVPFIP 131 (245)
Q Consensus 80 ~~~~i~~~l~~l~---~~~~~lvGhS~Gg~~a~~~a---~~~p~~v~~lv~~~~~~~~ 131 (245)
+.+.|.+-++.+. -.|+++.|-|+|+.-+...- ...-+++++.+..++|...
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 3344444445552 34799999999988766432 2233579999999988653
No 277
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=37.02 E-value=70 Score=27.02 Aligned_cols=72 Identities=11% Similarity=0.183 Sum_probs=36.3
Q ss_pred eEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCcEEEE
Q 025988 27 VVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD-HLGINKVFLV 99 (245)
Q Consensus 27 ~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~-~l~~~~~~lv 99 (245)
|+|++-|+|+++.+ .+.+...|.+.++.|+.++--..+.....- ......+..-..+...++ .++-+.++|+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~~~~~~y-~~~~~Ek~~R~~l~s~v~r~ls~~~iVI~ 76 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLGIDRNDY-ADSKKEKEARGSLKSAVERALSKDTIVIL 76 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH-TTSSS---GGGHHHHHHHHHHHHHHHHTT-SEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccccchhhh-hchhhhHHHHHHHHHHHHHhhccCeEEEE
Confidence 68999999999887 445667777788999888754444221111 112234444445555554 3455555544
No 278
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=36.39 E-value=1.9e+02 Score=23.57 Aligned_cols=32 Identities=22% Similarity=0.070 Sum_probs=22.1
Q ss_pred EEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCC
Q 025988 28 VVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYR 61 (245)
Q Consensus 28 vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~ 61 (245)
+..+-|.+ .-.-+.+...|++.|++|++.|+.
T Consensus 16 ~~~vtGg~--sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 16 VAAVTGGS--SGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred eeEEecCC--chHHHHHHHHHHhcCcEEEEeecc
Confidence 44444433 224566788899999999999864
No 279
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=35.96 E-value=2.2e+02 Score=25.54 Aligned_cols=84 Identities=21% Similarity=0.213 Sum_probs=55.1
Q ss_pred eEEEEcCCCC-------CccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 025988 27 VVVFLHGFPE-------IWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (245)
Q Consensus 27 ~vl~lHG~~~-------~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lv 99 (245)
.||+|||... +.+.|..+++.+.+++ .+-.+|.--.|.-+. +++-+.-+..+++. .+-.+|
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~G--------leeDa~~lR~~a~~---~~~~lv 240 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFADG--------LEEDAYALRLFAEV---GPELLV 240 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhccc--------hHHHHHHHHHHHHh---CCcEEE
Confidence 6999999754 3456999999888875 555677765554332 33333334444433 222788
Q ss_pred EEccCHHHHHHHHHhCCcceeEEEEeCC
Q 025988 100 AKDFGARPAYLFALLHPERVSGVITLGV 127 (245)
Q Consensus 100 GhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 127 (245)
..|..-...+ |.|||-++.+++.
T Consensus 241 a~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 241 ASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred Eehhhhhhhh-----hhhccceeEEEeC
Confidence 8888766654 5789999988853
No 280
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=35.58 E-value=3.1e+02 Score=24.17 Aligned_cols=90 Identities=11% Similarity=0.008 Sum_probs=53.0
Q ss_pred CceEEEEcCC----C-CCccchHHHHHHHHH-CCcEEEEeCCCCCCCCCCCC----------C----CCCCCHHHHHHHH
Q 025988 25 PNVVVFLHGF----P-EIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPA----------E----PEKASFKDITNDL 84 (245)
Q Consensus 25 ~~~vl~lHG~----~-~~~~~~~~~~~~l~~-~g~~via~d~~G~G~s~~~~----------~----~~~~~~~~~~~~i 84 (245)
+..|+++-|. + +...+--.+...|.. .+-+++++=-+|-|.-.-.. . ....++.+-+...
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 3388888885 2 222444455566655 47888888888877652211 0 0112222222222
Q ss_pred H-HHHHHh-CCCcEEEEEEccCHHHHHHHHHh
Q 025988 85 L-ATLDHL-GINKVFLVAKDFGARPAYLFALL 114 (245)
Q Consensus 85 ~-~~l~~l-~~~~~~lvGhS~Gg~~a~~~a~~ 114 (245)
. -++.++ -.++|++.|+|-|+.+|-.+|..
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2 223333 34789999999999999887764
No 281
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=35.50 E-value=3.6e+02 Score=24.92 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=56.6
Q ss_pred eEEEEcCCCCC---ccchHHHHHHHHHCCcEEEEeCCC--C-CCCCCCCCCCCCCCHHHHHHHHHHHHHH-----h----
Q 025988 27 VVVFLHGFPEI---WYSWRHQMVAVAAAGFRAIAPDYR--G-YGLSDPPAEPEKASFKDITNDLLATLDH-----L---- 91 (245)
Q Consensus 27 ~vl~lHG~~~~---~~~~~~~~~~l~~~g~~via~d~~--G-~G~s~~~~~~~~~~~~~~~~~i~~~l~~-----l---- 91 (245)
+||++..+... ....+..+..|.+.|+.|+-|+.- . .|...... -...++++..+..++.. |
T Consensus 182 PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~g~lA~~g~~G~Gr---m~e~~~I~~~v~~~~~~~~~~~l~gkk 258 (475)
T PRK13982 182 PILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAGEMAERGEAGVGR---MAEPLEIAAAAEALLRPPQPKPLAGRR 258 (475)
T ss_pred CEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCCcCCCC---CCCHHHHHHHHHHHHhhccccccCCCE
Confidence 78888877544 223456678888899999977641 1 34433322 23567777777776632 3
Q ss_pred ----------CCCcEEEEEEccCHHHHHHHHHhCCcceeEEEEeCCCC
Q 025988 92 ----------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (245)
Q Consensus 92 ----------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 129 (245)
.+++|=.++.---|.+...+|...-.+=..++++++|.
T Consensus 259 vLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 259 VLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred EEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc
Confidence 34556556644344455444433322334556666553
No 282
>PF03283 PAE: Pectinacetylesterase
Probab=35.04 E-value=1.3e+02 Score=26.73 Aligned_cols=46 Identities=26% Similarity=0.180 Sum_probs=27.8
Q ss_pred HHHHHHH-h-CCCcEEEEEEccCHHHHHHHH----HhCCcceeEEEEeCCCC
Q 025988 84 LLATLDH-L-GINKVFLVAKDFGARPAYLFA----LLHPERVSGVITLGVPF 129 (245)
Q Consensus 84 i~~~l~~-l-~~~~~~lvGhS~Gg~~a~~~a----~~~p~~v~~lv~~~~~~ 129 (245)
+..++.. + +.++++|.|.|.||.-++.-+ ...|..++-..+.+..+
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 3334444 3 357899999999999988643 44564333334444433
No 283
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=34.95 E-value=1.6e+02 Score=25.49 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh-CCc---ceeEEEEeCCCCCC
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPE---RVSGVITLGVPFIP 131 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~-~p~---~v~~lv~~~~~~~~ 131 (245)
-++.+.+.+++.. ++.++. .|-..-+.+|.+ +|+ +++.+++|++.+..
T Consensus 101 A~~~i~~~~~~~~--eitiva--~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~~ 152 (320)
T cd02653 101 AAQAWVDLARAHP--DLIGLA--TGPLTNLALALREEPELPRLLRRLVIMGGAFNS 152 (320)
T ss_pred HHHHHHHHHHhCC--CeEEEE--CCchHHHHHHHHHChHHHHhcCEEEEECCCcCC
Confidence 3455566666544 788885 676665555543 565 79999999988643
No 284
>PF15566 Imm18: Immunity protein 18
Probab=34.54 E-value=49 Score=20.46 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHH
Q 025988 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPA 108 (245)
Q Consensus 76 ~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a 108 (245)
.++.+++++..+......+.++++--||||.-.
T Consensus 3 gL~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~EL 35 (52)
T PF15566_consen 3 GLELLQDQLENLQEKEPFDHEHLMTPDWGGEEL 35 (52)
T ss_pred hHHHHHHHHHHHHhccCCCCceecccccccccc
Confidence 356677888888877777889999999999643
No 285
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=34.37 E-value=2.1e+02 Score=22.74 Aligned_cols=73 Identities=18% Similarity=0.194 Sum_probs=46.8
Q ss_pred HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhC-C-ccee
Q 025988 43 HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLH-P-ERVS 120 (245)
Q Consensus 43 ~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~-p-~~v~ 120 (245)
..++.+.++++.+|.+|-+|... .-.+..+.+..+++......+++|=-+..+.-.+..+..+ . -.+.
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~ 143 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGID 143 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTC
T ss_pred HHHHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCc
Confidence 34455666789999999997543 2345677888888888777777765555555555433332 2 2478
Q ss_pred EEEEe
Q 025988 121 GVITL 125 (245)
Q Consensus 121 ~lv~~ 125 (245)
++|+.
T Consensus 144 ~lIlT 148 (196)
T PF00448_consen 144 GLILT 148 (196)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88874
No 286
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=34.21 E-value=63 Score=22.81 Aligned_cols=37 Identities=30% Similarity=0.293 Sum_probs=27.3
Q ss_pred EEEEcCCCCCccchHHHHHHHHHC-CcEEEEeCC--CCCCCC
Q 025988 28 VVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDY--RGYGLS 66 (245)
Q Consensus 28 vl~lHG~~~~~~~~~~~~~~l~~~-g~~via~d~--~G~G~s 66 (245)
+|++.|.+++..+- ++..|++. |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEecccc
Confidence 68899999998773 55667665 899998887 544444
No 287
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=33.45 E-value=48 Score=27.99 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=29.1
Q ss_pred ceEEEEcCCCCCcc--chHHHHHHHHHCCcEEEEeCCC
Q 025988 26 NVVVFLHGFPEIWY--SWRHQMVAVAAAGFRAIAPDYR 61 (245)
Q Consensus 26 ~~vl~lHG~~~~~~--~~~~~~~~l~~~g~~via~d~~ 61 (245)
|+||++.|+-+++. ..+.++..+...|++|.++.-|
T Consensus 56 ~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 56 SLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred cEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 49999999976655 4677888888889999998655
No 288
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=33.40 E-value=61 Score=24.96 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=23.8
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
+...+++.++..-.++|-|.|+.++..++...
T Consensus 18 vl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 33444555666668999999999999888654
No 289
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=33.24 E-value=3.6e+02 Score=24.22 Aligned_cols=71 Identities=18% Similarity=0.231 Sum_probs=42.4
Q ss_pred eEEEEcCCCCCc---cchHHHHHHHHHCCcEEEEeCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCCcEEE
Q 025988 27 VVVFLHGFPEIW---YSWRHQMVAVAAAGFRAIAPDYRGY---GLSDPPAEPEKASFKDITNDLLATLDH--LGINKVFL 98 (245)
Q Consensus 27 ~vl~lHG~~~~~---~~~~~~~~~l~~~g~~via~d~~G~---G~s~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~l 98 (245)
|||++..+.... ......+..|.+.|+.|+-|. +|+ |...... -.+.+++...+...+.. +..+++.+
T Consensus 118 pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr---~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 118 PVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGR---MAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCC---CCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 677777654322 124556778888899988664 332 3332221 34677777777776643 44456777
Q ss_pred EEE
Q 025988 99 VAK 101 (245)
Q Consensus 99 vGh 101 (245)
.|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 665
No 290
>PLN02717 uridine nucleosidase
Probab=33.02 E-value=2.1e+02 Score=24.65 Aligned_cols=49 Identities=22% Similarity=0.394 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh-CCc---ceeEEEEeCCCCCC
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPE---RVSGVITLGVPFIP 131 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~-~p~---~v~~lv~~~~~~~~ 131 (245)
-++.+.+.+.+.. +++.++. .|-..-+.+|.+ +|+ +|+.+++|++.+..
T Consensus 104 A~~~i~~~~~~~~-~~itiva--~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~~ 156 (316)
T PLN02717 104 AAEFLVEKVSEYP-GEVTVVA--LGPLTNLALAIKLDPSFAKKVGQIVVLGGAFFV 156 (316)
T ss_pred HHHHHHHHHHhCC-CCEEEEE--CCcHHHHHHHHHHChHHHhhcCEEEEeCCCcCC
Confidence 3455555555443 5788885 676665555543 676 79999999988643
No 291
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=32.99 E-value=2.5e+02 Score=23.14 Aligned_cols=58 Identities=21% Similarity=0.337 Sum_probs=34.9
Q ss_pred eEEEEcCCCCCccchHHHHH-HHHHCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 025988 27 VVVFLHGFPEIWYSWRHQMV-AVAAAGF-RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~-~l~~~g~-~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lv 99 (245)
+|++.||...++...-..++ .+.+.|| .|+....-||- ..+++.+.++.-+++.+.++
T Consensus 140 ~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP---------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 140 LVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP---------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC---------------cHHHHHHHHHHcCCceEEEe
Confidence 78888888765554333333 4555677 56555544332 14566667777788776665
No 292
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=32.96 E-value=59 Score=27.07 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=25.1
Q ss_pred HHHHHHHhCCC-cEEEEEEccCHHHHHHHHHhCCc
Q 025988 84 LLATLDHLGIN-KVFLVAKDFGARPAYLFALLHPE 117 (245)
Q Consensus 84 i~~~l~~l~~~-~~~lvGhS~Gg~~a~~~a~~~p~ 117 (245)
+...+.+.++. -=.++|-|.|+.++..+++..+.
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 34444555665 44899999999999999887654
No 293
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=32.52 E-value=93 Score=27.32 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=28.1
Q ss_pred EEEEcCC-CCCccchHHHHHHHHHCCcEEEEeCCCCCCCC
Q 025988 28 VVFLHGF-PEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLS 66 (245)
Q Consensus 28 vl~lHG~-~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s 66 (245)
|||+|.. |+ .|+.+++.|.+.|+.|..+-..+.+..
T Consensus 2 il~~~~~~p~---~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFPG---QFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCch---hHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 6888864 44 388999999999999988877666543
No 294
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=32.33 E-value=87 Score=24.72 Aligned_cols=59 Identities=20% Similarity=0.240 Sum_probs=35.4
Q ss_pred ceEEEEcCCCCCccc---hHHHHHHHHHCCcEEEEeCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025988 26 NVVVFLHGFPEIWYS---WRHQMVAVAAAGFRAIAPDYRG--YGLSDPPAEPEKASFKDITNDLLATLDH 90 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~---~~~~~~~l~~~g~~via~d~~G--~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 90 (245)
+|++++||-.+..-. -..+...|.+.|..+...-+++ ||.... ....+..+.+.+++++
T Consensus 145 ~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~------~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 145 PPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP------ENRRDWYERILDFFDK 208 (213)
T ss_dssp SEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH------HHHHHHHHHHHHHHHH
T ss_pred CCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc------hhHHHHHHHHHHHHHH
Confidence 499999998765433 3446677878776665555554 533321 1233556666677654
No 295
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=32.29 E-value=2.3e+02 Score=21.65 Aligned_cols=85 Identities=18% Similarity=0.098 Sum_probs=51.6
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEE-EccC
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGF-RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVA-KDFG 104 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~-~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvG-hS~G 104 (245)
..+++-|-... .....+...|. +|+.++.+. ...|+.+.+++-+.++++..+. .++|+| .+.|
T Consensus 31 v~~v~~G~~~~-----~~~~~~~~~Gad~v~~~~~~~---------~~~~~~~~~a~al~~~i~~~~p-~~Vl~~~t~~g 95 (168)
T cd01715 31 VTALVIGSGAE-----AVAAALKAYGADKVLVAEDPA---------LAHYLAEPYAPALVALAKKEKP-SHILAGATSFG 95 (168)
T ss_pred EEEEEECCChH-----HHHHHHHhcCCCEEEEecChh---------hcccChHHHHHHHHHHHHhcCC-CEEEECCCccc
Confidence 55555554322 12344444555 566665442 1246778889999999988774 566666 4567
Q ss_pred HHHHHHHHHhCC-cceeEEEEeC
Q 025988 105 ARPAYLFALLHP-ERVSGVITLG 126 (245)
Q Consensus 105 g~~a~~~a~~~p-~~v~~lv~~~ 126 (245)
.-++-++|.+.. ..+..++-+.
T Consensus 96 ~~la~rlAa~L~~~~vtdv~~l~ 118 (168)
T cd01715 96 KDLAPRVAAKLDVGLISDVTALE 118 (168)
T ss_pred cchHHHHHHHhCCCceeeEEEEc
Confidence 778888887743 2455555553
No 296
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=32.14 E-value=2.7e+02 Score=22.47 Aligned_cols=75 Identities=13% Similarity=0.009 Sum_probs=43.9
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~ 103 (245)
.||++.............+..+.+.|..|+.+|..-.+....+ .-..+-...+..+.+.+-..|.+++.+++...
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~~--~V~~d~~~~~~~~~~~l~~~g~~~i~~i~~~~ 132 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKVP--HVSTDDALAMRLAVRHLVALGHRRIGFASGPG 132 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCCC--EEEECcHHHHHHHHHHHHHCCCceEEEEeCCc
Confidence 5666665444433444556677778899999986433311111 11223444556666666566889998887543
No 297
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=32.00 E-value=71 Score=21.55 Aligned_cols=40 Identities=15% Similarity=0.124 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHH----hCCCcEEEEEEccCHHHHHHHHHhC
Q 025988 76 SFKDITNDLLATLDH----LGINKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 76 ~~~~~~~~i~~~l~~----l~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
..+..+++..+.++. -+.+++.++|-|-|=.+|.++++..
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 344444444444444 3567899999999999998887764
No 298
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=31.87 E-value=2.9e+02 Score=25.26 Aligned_cols=70 Identities=17% Similarity=0.196 Sum_probs=51.4
Q ss_pred HHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCc--ceeEEE
Q 025988 46 VAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPE--RVSGVI 123 (245)
Q Consensus 46 ~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv 123 (245)
+.+...+|.|+.+|-.|.= .--+++.+.+.++-+.+..+.+.+|--+|=|.-|...|..+.+ -+.++|
T Consensus 176 ~~ak~~~~DvvIvDTAGRl----------~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRL----------HIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHHHcCCCEEEEeCCCcc----------cccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 3344445667776665421 1235678888888899999999999999999999998887765 477888
Q ss_pred Ee
Q 025988 124 TL 125 (245)
Q Consensus 124 ~~ 125 (245)
+.
T Consensus 246 lT 247 (451)
T COG0541 246 LT 247 (451)
T ss_pred EE
Confidence 74
No 299
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=31.83 E-value=80 Score=24.33 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=26.1
Q ss_pred ceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeC
Q 025988 26 NVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPD 59 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d 59 (245)
+.||++-|.+++..+ -+.+...|.+.|+.|+.+|
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 379999999998876 3455667778899999997
No 300
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=31.79 E-value=2e+02 Score=22.46 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=36.3
Q ss_pred HHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccC
Q 025988 48 VAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (245)
Q Consensus 48 l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~G 104 (245)
|.+.|++.+.+|.-..=.... ...-.+++.+.+.++.+..+.+++.+|..|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~----~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY----EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC----cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 778899999999874321111 11223456666677777777779999999986
No 301
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=31.75 E-value=55 Score=27.03 Aligned_cols=69 Identities=16% Similarity=0.190 Sum_probs=44.8
Q ss_pred CceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHhC-CCcEEEEE
Q 025988 25 PNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITN-DLLATLDHLG-INKVFLVA 100 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~-~i~~~l~~l~-~~~~~lvG 100 (245)
.|+||++.|+-+++.. -+.+...+..+|++|.++.-|- -++... -+-.+-..+. ..++.|.=
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt--------------~eE~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS--------------DRERTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC--------------HHHHcChHHHHHHHhCCCCCeEEEEe
Confidence 3599999999766554 6777788888899999977661 122222 2444555663 35677776
Q ss_pred EccCHHH
Q 025988 101 KDFGARP 107 (245)
Q Consensus 101 hS~Gg~~ 107 (245)
-||=+-+
T Consensus 96 rSwY~~~ 102 (230)
T TIGR03707 96 RSWYNRA 102 (230)
T ss_pred CchhhhH
Confidence 6665443
No 302
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=31.70 E-value=35 Score=30.86 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcce
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERV 119 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 119 (245)
+...+.+.++.+=+++|-|.|+.+|..++...++.+
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 344444447766789999999999999998766553
No 303
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=31.42 E-value=61 Score=26.60 Aligned_cols=34 Identities=21% Similarity=0.063 Sum_probs=25.2
Q ss_pred HHHHHHHhCCC--cEEEEEEccCHHHHHHHHHhCCc
Q 025988 84 LLATLDHLGIN--KVFLVAKDFGARPAYLFALLHPE 117 (245)
Q Consensus 84 i~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~~p~ 117 (245)
+.+.+.+.++. ...++|-|.|+.++..++...+.
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 44455555665 34799999999999999887543
No 304
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=30.93 E-value=1.8e+02 Score=24.61 Aligned_cols=85 Identities=20% Similarity=0.245 Sum_probs=55.5
Q ss_pred CCceEEEEcCCCCCccchHHHHHHHHHCCcE-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 025988 24 GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFR-AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKD 102 (245)
Q Consensus 24 ~~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~-via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS 102 (245)
+-|.+||.=-.+--......+++.+.+.|.. ++.||+| + +..+++....++.+++.+.++.-+
T Consensus 94 ~~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP-------~---------ee~~~~~~~~~~~gi~~I~lvaPt 157 (265)
T COG0159 94 KVPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP-------P---------EESDELLKAAEKHGIDPIFLVAPT 157 (265)
T ss_pred CCCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC-------h---------HHHHHHHHHHHHcCCcEEEEeCCC
Confidence 3335555555555555566777788888755 8899998 1 235678888889999999999877
Q ss_pred cCHHHHHHHHHhCCcceeEEEEe
Q 025988 103 FGARPAYLFALLHPERVSGVITL 125 (245)
Q Consensus 103 ~Gg~~a~~~a~~~p~~v~~lv~~ 125 (245)
..---.-.++..... +--+|.+
T Consensus 158 t~~~rl~~i~~~a~G-FiY~vs~ 179 (265)
T COG0159 158 TPDERLKKIAEAASG-FIYYVSR 179 (265)
T ss_pred CCHHHHHHHHHhCCC-cEEEEec
Confidence 665555555544433 3333433
No 305
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=30.80 E-value=72 Score=24.02 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHH
Q 025988 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLF 111 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~ 111 (245)
......+.-.+..++.+.++++||+==|++...+
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHH
Confidence 4455666777788999999999999666665433
No 306
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=30.58 E-value=66 Score=26.21 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=22.8
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCC
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYR 61 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~ 61 (245)
.=+|+.|.|.+.. +..|+++||+|+.+|+-
T Consensus 39 ~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 39 GRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp EEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 5678888887743 44678889999999975
No 307
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=29.94 E-value=2.5e+02 Score=21.27 Aligned_cols=72 Identities=19% Similarity=0.142 Sum_probs=45.5
Q ss_pred HHHHHHCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEE-ccCHHHHHHHHHhCC-cceeE
Q 025988 45 MVAVAAAGF-RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK-DFGARPAYLFALLHP-ERVSG 121 (245)
Q Consensus 45 ~~~l~~~g~-~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGh-S~Gg~~a~~~a~~~p-~~v~~ 121 (245)
...+...|. +|+..+.+. ...++.+.+++-+.+++++.+.+ ++++|+ +.|.-++-++|.+.. ..+..
T Consensus 51 ~~~l~~~G~d~v~~~~~~~---------~~~~~~~~~a~~l~~~~~~~~~~-lVl~~~t~~g~~la~~lA~~L~~~~v~~ 120 (164)
T PF01012_consen 51 RKALAKYGADKVYHIDDPA---------LAEYDPEAYADALAELIKEEGPD-LVLFGSTSFGRDLAPRLAARLGAPLVTD 120 (164)
T ss_dssp HHHHHSTTESEEEEEE-GG---------GTTC-HHHHHHHHHHHHHHHT-S-EEEEESSHHHHHHHHHHHHHHT-EEEEE
T ss_pred hhhhhhcCCcEEEEecCcc---------ccccCHHHHHHHHHHHHHhcCCC-EEEEcCcCCCCcHHHHHHHHhCCCccce
Confidence 344554676 688887662 22467888999999999998765 666775 466677777776632 23455
Q ss_pred EEEeC
Q 025988 122 VITLG 126 (245)
Q Consensus 122 lv~~~ 126 (245)
++-+.
T Consensus 121 v~~l~ 125 (164)
T PF01012_consen 121 VTDLE 125 (164)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54443
No 308
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=29.05 E-value=1.6e+02 Score=22.65 Aligned_cols=46 Identities=26% Similarity=0.254 Sum_probs=27.2
Q ss_pred CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc-EEEEEEccCHHHHH
Q 025988 52 GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINK-VFLVAKDFGARPAY 109 (245)
Q Consensus 52 g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~-~~lvGhS~Gg~~a~ 109 (245)
|-.|++.|.+|- ..+.+++|+.+..+-+ .| +. .++||-|-|=--+.
T Consensus 67 ~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~~-~G-~~i~f~IGG~~Gl~~~~ 113 (155)
T COG1576 67 GSYVVLLDIRGK----------ALSSEEFADFLERLRD-DG-RDISFLIGGADGLSEAV 113 (155)
T ss_pred CCeEEEEecCCC----------cCChHHHHHHHHHHHh-cC-CeEEEEEeCcccCCHHH
Confidence 678899998862 2445566665554433 34 44 45677776644443
No 309
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=28.78 E-value=57 Score=29.26 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEE
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGV 122 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 122 (245)
+...+.+.|+.+=++.|-|.|+.+|..+|..-++.+..+
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 444455557777789999999999999998655444433
No 310
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=28.65 E-value=31 Score=26.62 Aligned_cols=47 Identities=17% Similarity=0.149 Sum_probs=27.6
Q ss_pred CCCCCCCCCC-CCCCCCCHHHHHHHH----HHHHHHh----CCCcEEEEEEccCHH
Q 025988 60 YRGYGLSDPP-AEPEKASFKDITNDL----LATLDHL----GINKVFLVAKDFGAR 106 (245)
Q Consensus 60 ~~G~G~s~~~-~~~~~~~~~~~~~~i----~~~l~~l----~~~~~~lvGhS~Gg~ 106 (245)
+-|||..... .....++.++++.-+ ..+.+.+ ..+++.|+|-|++..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 4588877221 123467888999888 4555444 346789999888877
No 311
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=28.40 E-value=2.4e+02 Score=24.36 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=43.6
Q ss_pred ceEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCC--------CCCCCCCC-----CCCCCCCHHHHHHHHHHHHHHhC
Q 025988 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYR--------GYGLSDPP-----AEPEKASFKDITNDLLATLDHLG 92 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~--------G~G~s~~~-----~~~~~~~~~~~~~~i~~~l~~l~ 92 (245)
|-|+|.-|.+ ..++.|+..||.||..|.- --|..-.- +..-.-+.+.+.+.+.+.++..|
T Consensus 253 Pmi~fakG~g-------~~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSG-------GALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcc-------hHHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 4688887764 2457788889999999963 11111000 11112356777788888888888
Q ss_pred CCcEEE-EEEc
Q 025988 93 INKVFL-VAKD 102 (245)
Q Consensus 93 ~~~~~l-vGhS 102 (245)
-++.++ .||-
T Consensus 326 ~~ryI~NLGHG 336 (359)
T KOG2872|consen 326 KSRYIANLGHG 336 (359)
T ss_pred ccceEEecCCC
Confidence 666554 6664
No 312
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine a
Probab=27.93 E-value=2.6e+02 Score=23.87 Aligned_cols=47 Identities=23% Similarity=0.366 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh-CCc---ceeEEEEeCCCC
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPE---RVSGVITLGVPF 129 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~-~p~---~v~~lv~~~~~~ 129 (245)
-++.+.+.+.+.. +++.++. .|-..-+.+|.+ +|+ +++.+++|++.+
T Consensus 101 a~~~i~~~~~~~~-~evtiva--~GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 151 (302)
T cd02651 101 AVDAIIDTLRASP-EPITLVA--TGPLTNIALLLRKYPELAERIKEIVLMGGAL 151 (302)
T ss_pred HHHHHHHHHHhCC-CCEEEEE--cCchHHHHHHHHHChhhHhhcCEEEEecCCc
Confidence 4455556665544 4788874 777776666654 676 899999999876
No 313
>cd02650 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=27.88 E-value=3e+02 Score=23.50 Aligned_cols=48 Identities=25% Similarity=0.374 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHh-CCc---ceeEEEEeCCCCCC
Q 025988 81 TNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPE---RVSGVITLGVPFIP 131 (245)
Q Consensus 81 ~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~-~p~---~v~~lv~~~~~~~~ 131 (245)
++.+.+.+++.. +++.++. .|...-+..+.+ +|+ +|+.+++|++.+..
T Consensus 103 ~~~l~~~~~~~~-~~vtiva--iGPLTNlA~al~~~P~i~~~ik~iviMGG~~~~ 154 (304)
T cd02650 103 ADFLIELANEYP-GELTLVA--VGPLTNLALALARDPDFAKLVKQVVVMGGAFTV 154 (304)
T ss_pred HHHHHHHHHhCC-CCeEEEE--CCcHHHHHHHHHHCcHHHhhcCEEEEeCccccC
Confidence 444555554433 5788885 677766655544 565 78999999988644
No 314
>PF14392 zf-CCHC_4: Zinc knuckle
Probab=27.77 E-value=24 Score=21.29 Aligned_cols=9 Identities=56% Similarity=1.800 Sum_probs=6.8
Q ss_pred cccccccCC
Q 025988 237 SISKFCFHC 245 (245)
Q Consensus 237 ~~~~~~~~~ 245 (245)
.++.+|++|
T Consensus 29 ~lp~~C~~C 37 (49)
T PF14392_consen 29 RLPRFCFHC 37 (49)
T ss_pred CcChhhcCC
Confidence 477788887
No 315
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=27.73 E-value=3.1e+02 Score=21.72 Aligned_cols=46 Identities=22% Similarity=0.402 Sum_probs=31.1
Q ss_pred HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCCc
Q 025988 42 RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLL-ATLDHLGINK 95 (245)
Q Consensus 42 ~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~-~~l~~l~~~~ 95 (245)
+..+..|.+.|+.|+-|.. | .=.+| .+++++++.+. .+++.+|++.
T Consensus 132 ~~Nl~~L~~~G~~vi~P~~-g--~~a~p-----~~~~~~~~~~v~~~~~~l~~~~ 178 (185)
T PRK06029 132 LRNMTKLAEMGAIIMPPVP-A--FYHRP-----QTLEDMVDQTVGRVLDLFGIEH 178 (185)
T ss_pred HHHHHHHHHCcCEEECCCc-c--cccCC-----CCHHHHHHHHHHHHHHhcCCCC
Confidence 3556778888988887765 3 22233 46888888654 6778888763
No 316
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=27.56 E-value=85 Score=25.95 Aligned_cols=33 Identities=12% Similarity=-0.014 Sum_probs=23.7
Q ss_pred HHHHHHHhCCC--c--EEEEEEccCHHHHHHHHHhCC
Q 025988 84 LLATLDHLGIN--K--VFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 84 i~~~l~~l~~~--~--~~lvGhS~Gg~~a~~~a~~~p 116 (245)
+...+.+.++. + -.++|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 34444445554 2 389999999999999988764
No 317
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=26.90 E-value=2.4e+02 Score=22.18 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=34.2
Q ss_pred eEEEEcCCCC---CccchHHHHHHHHHCCcEEEEeCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHH
Q 025988 27 VVVFLHGFPE---IWYSWRHQMVAVAAAGFRAIAPDYRGY---GLSDPPAEPEKASFKDITNDLLATL 88 (245)
Q Consensus 27 ~vl~lHG~~~---~~~~~~~~~~~l~~~g~~via~d~~G~---G~s~~~~~~~~~~~~~~~~~i~~~l 88 (245)
+||++.-+.. .....+..+..|.+.|+.|+-|. +|+ |...... ..+++++.+.+..++
T Consensus 115 pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g~---~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 115 PKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYGA---LADIETILETIENTL 178 (182)
T ss_pred CEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCCC---CCCHHHHHHHHHHHh
Confidence 6777775432 22234566788888898888777 444 4433221 235666666665554
No 318
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=26.72 E-value=1.3e+02 Score=29.14 Aligned_cols=76 Identities=16% Similarity=0.176 Sum_probs=48.5
Q ss_pred ceEEEEcCCCCC----------ccchHHHHHHHHHCCcEEEEeCCC-C--CCCCCCCCCC----CCCCHHHHHHHHHHHH
Q 025988 26 NVVVFLHGFPEI----------WYSWRHQMVAVAAAGFRAIAPDYR-G--YGLSDPPAEP----EKASFKDITNDLLATL 88 (245)
Q Consensus 26 ~~vl~lHG~~~~----------~~~~~~~~~~l~~~g~~via~d~~-G--~G~s~~~~~~----~~~~~~~~~~~i~~~l 88 (245)
.+||+.|..... ...+..++..|.++||++|.++-- . .|....|... .+.+..+....+..+|
T Consensus 49 ~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlPIL 128 (672)
T PRK14581 49 FVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYPLL 128 (672)
T ss_pred eEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHHHH
Confidence 389999998543 235888999999999999999721 1 1222222110 1223334567788899
Q ss_pred HHhCCCcE-EEEEE
Q 025988 89 DHLGINKV-FLVAK 101 (245)
Q Consensus 89 ~~l~~~~~-~lvGh 101 (245)
++.+..-+ .+||.
T Consensus 129 Kkyg~pATfFvVg~ 142 (672)
T PRK14581 129 KAYKWSAVLAPVGT 142 (672)
T ss_pred HHcCCCEEEEEech
Confidence 99998754 44553
No 319
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=26.53 E-value=82 Score=25.89 Aligned_cols=29 Identities=14% Similarity=0.145 Sum_probs=21.0
Q ss_pred EEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCC
Q 025988 28 VVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYR 61 (245)
Q Consensus 28 vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~ 61 (245)
=||+.|.|.+ .-+..|+++||+|+++|+-
T Consensus 46 rvLvPgCGkg-----~D~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCS-----IDMLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCCh-----HHHHHHHhCCCcEEEEecC
Confidence 5566666655 2245688899999999986
No 320
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=25.94 E-value=30 Score=28.48 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=25.8
Q ss_pred ceEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCC
Q 025988 26 NVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYR 61 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~ 61 (245)
|+||++.|+-+++.. -..+...|-..|++|.++.-|
T Consensus 31 ~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 31 PVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred cEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 489999999887665 455556666679999998876
No 321
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=25.90 E-value=49 Score=29.80 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCcceeEE
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGV 122 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 122 (245)
+...+.+.++.+=+++|-|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 344444447777789999999999999998766555444
No 322
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=25.79 E-value=2.6e+02 Score=26.67 Aligned_cols=41 Identities=12% Similarity=0.087 Sum_probs=27.7
Q ss_pred ceEEEEcCCCCCccc---hHHHHHHHHHCCcEEEEeCCCCCCCC
Q 025988 26 NVVVFLHGFPEIWYS---WRHQMVAVAAAGFRAIAPDYRGYGLS 66 (245)
Q Consensus 26 ~~vl~lHG~~~~~~~---~~~~~~~l~~~g~~via~d~~G~G~s 66 (245)
.|+|++||-.+.--. -..+...|..+|..|-..=+|+-|.+
T Consensus 552 ~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 552 TPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred CCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 389999998754332 34466778778888776666654444
No 323
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=25.58 E-value=3.8e+02 Score=21.96 Aligned_cols=71 Identities=14% Similarity=0.136 Sum_probs=43.0
Q ss_pred eEEEEcCCCCCc---------cchHHHHHHHHHCCcEEE-EeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcE
Q 025988 27 VVVFLHGFPEIW---------YSWRHQMVAVAAAGFRAI-APDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKV 96 (245)
Q Consensus 27 ~vl~lHG~~~~~---------~~~~~~~~~l~~~g~~vi-a~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~ 96 (245)
.|++.++.+... ......+..+.++|.+|+ ++.--..+..-. ........+.+++.+.++++..+.+-+
T Consensus 30 ~v~lf~~~~~~~~~~~~~~~~~~~~~~i~~l~~kG~KVl~sigg~~~~~~~~-~~~~~~~~~~fa~~l~~~v~~yglDGi 108 (255)
T cd06542 30 MVSLFAANINLDAATAVQFLLTNKETYIRPLQAKGTKVLLSILGNHLGAGFA-NNLSDAAAKAYAKAIVDTVDKYGLDGV 108 (255)
T ss_pred EEEEcccccCcccccchhhhhHHHHHHHHHHhhCCCEEEEEECCCCCCCCcc-ccCCHHHHHHHHHHHHHHHHHhCCCce
Confidence 455556654432 445566777888899986 565433222210 111123478889999999998887765
Q ss_pred EE
Q 025988 97 FL 98 (245)
Q Consensus 97 ~l 98 (245)
-+
T Consensus 109 Di 110 (255)
T cd06542 109 DF 110 (255)
T ss_pred EE
Confidence 54
No 324
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=25.20 E-value=47 Score=28.75 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=15.7
Q ss_pred CCCceEEEEcCCCCCccch
Q 025988 23 TGPNVVVFLHGFPEIWYSW 41 (245)
Q Consensus 23 ~~~~~vl~lHG~~~~~~~~ 41 (245)
+.+|.+|=+|||+++..++
T Consensus 107 p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCCCeEEEecCCCCCchhH
Confidence 4445999999999998886
No 325
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=25.14 E-value=4.3e+02 Score=22.52 Aligned_cols=58 Identities=21% Similarity=0.298 Sum_probs=29.9
Q ss_pred HHHHHHHHHCCcE--EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHH
Q 025988 42 RHQMVAVAAAGFR--AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPA 108 (245)
Q Consensus 42 ~~~~~~l~~~g~~--via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a 108 (245)
...+..+.+.|.. =|.+|. |+|.+.... .+++ +.+.+..+ .. ....+++|+|-=+.+.
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k~~~----~n~~-ll~~l~~l-~~--lg~Pilvg~SRKsfig 225 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGKNLS----HNYQ-LLARLAEF-HH--FNLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCCCHH----HHHH-HHHHHHHH-Hh--CCCCEEEEecccHHHH
Confidence 3445556667875 566675 566543211 1111 22233332 22 3456789999666554
No 326
>cd02649 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).
Probab=25.07 E-value=3.2e+02 Score=23.47 Aligned_cols=49 Identities=16% Similarity=0.290 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHH-hCCc---ceeEEEEeCCCCCC
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFAL-LHPE---RVSGVITLGVPFIP 131 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~-~~p~---~v~~lv~~~~~~~~ 131 (245)
-++.+.+.+.... +++.++. .|-..-+.+|. .+|+ +++.+++|++.+..
T Consensus 104 a~~~i~~~~~~~~-~~vtiva--~GPLTNlA~al~~~p~~~~~i~~iviMGG~~~~ 156 (306)
T cd02649 104 AVDAIIRLVREYP-GEITLVA--LGPLTNLALAYRLDPSLPQKIKRLYIMGGNREG 156 (306)
T ss_pred HHHHHHHHHHhCC-CCeEEEe--cccHHHHHHHHHHChHHHHhcCeEEEeCCCccC
Confidence 3455555555543 5788885 66666555443 3664 79999999988644
No 327
>PRK06849 hypothetical protein; Provisional
Probab=25.00 E-value=2.5e+02 Score=24.70 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=44.1
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCC---CC-----CCCCCCHHHHHHHHHHHHHHhCCCcEEE
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDP---PA-----EPEKASFKDITNDLLATLDHLGINKVFL 98 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~---~~-----~~~~~~~~~~~~~i~~~l~~l~~~~~~l 98 (245)
.||++ |.. ...-..++..|.+.|++|++.|......+.. .. .....+.+.+.+.+.++++..+++ +++
T Consensus 6 ~VLI~-G~~--~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id-~vI 81 (389)
T PRK06849 6 TVLIT-GAR--APAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENID-LLI 81 (389)
T ss_pred EEEEe-CCC--cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCC-EEE
Confidence 55555 322 2234567888999999999998875433211 00 001345677888999999888864 444
Q ss_pred EEEc
Q 025988 99 VAKD 102 (245)
Q Consensus 99 vGhS 102 (245)
-+.+
T Consensus 82 P~~e 85 (389)
T PRK06849 82 PTCE 85 (389)
T ss_pred ECCh
Confidence 4443
No 328
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.74 E-value=3.1e+02 Score=25.61 Aligned_cols=87 Identities=11% Similarity=0.143 Sum_probs=57.1
Q ss_pred EEEcCCCCCccch-HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHH
Q 025988 29 VFLHGFPEIWYSW-RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARP 107 (245)
Q Consensus 29 l~lHG~~~~~~~~-~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~ 107 (245)
||=-|++.+...- ..-++...++||.||.+|-.|.-.. -+.+...+..+++.-..+.++.||.-+=|.=
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~----------~~~lm~~l~k~~~~~~pd~i~~vgealvg~d 511 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN----------NAPLMTSLAKLIKVNKPDLILFVGEALVGND 511 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC----------ChhHHHHHHHHHhcCCCceEEEehhhhhCcH
Confidence 3444666554332 3334556677999999998874332 2335677778888878899999998877766
Q ss_pred HHHHHHh---------CCcceeEEEEe
Q 025988 108 AYLFALL---------HPERVSGVITL 125 (245)
Q Consensus 108 a~~~a~~---------~p~~v~~lv~~ 125 (245)
+..-+.. .|..++++++.
T Consensus 512 sv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 512 SVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHHhcCCCccccceEEEE
Confidence 6543322 24568888774
No 329
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=24.35 E-value=69 Score=27.89 Aligned_cols=32 Identities=13% Similarity=0.103 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCcEEEEEEccCHHHHHHHHHhC
Q 025988 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 84 i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (245)
+...+.+.++.+-++.|-|.|+.+|..++..-
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 34444455777778999999999999887643
No 330
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=24.22 E-value=4e+02 Score=21.86 Aligned_cols=35 Identities=11% Similarity=0.011 Sum_probs=24.8
Q ss_pred eEEEEcCCCCCccc---hHHHHHHHHHCCcEEEEeCCC
Q 025988 27 VVVFLHGFPEIWYS---WRHQMVAVAAAGFRAIAPDYR 61 (245)
Q Consensus 27 ~vl~lHG~~~~~~~---~~~~~~~l~~~g~~via~d~~ 61 (245)
.|.|+.=.+.+... -......|.+.|..+..+++-
T Consensus 34 ~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 34 TIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred eEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 89999877655444 234556788888888887764
No 331
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=24.12 E-value=1.3e+02 Score=25.96 Aligned_cols=19 Identities=11% Similarity=0.074 Sum_probs=16.6
Q ss_pred EEEEEccCHHHHHHHHHhC
Q 025988 97 FLVAKDFGARPAYLFALLH 115 (245)
Q Consensus 97 ~lvGhS~Gg~~a~~~a~~~ 115 (245)
.++|-|+||.+|..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6899999999999988754
No 332
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=23.92 E-value=4.7e+02 Score=23.83 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=45.0
Q ss_pred HHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHHhCCc--ceeEEEE
Q 025988 47 AVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPE--RVSGVIT 124 (245)
Q Consensus 47 ~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~ 124 (245)
.+.+.+|.++.+|-+|.-. .-+.+.+.+..+.+....+.+++|--++-|.-+...+..+-+ .+.++|+
T Consensus 177 ~~~~~~~DvViIDTaGr~~----------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHK----------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred HHHhCCCCEEEEECCCCCc----------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 3444579999999997422 223456667777777777778888777766666655554432 4778876
Q ss_pred e
Q 025988 125 L 125 (245)
Q Consensus 125 ~ 125 (245)
.
T Consensus 247 T 247 (429)
T TIGR01425 247 T 247 (429)
T ss_pred E
Confidence 4
No 333
>cd02907 Macro_Af1521_BAL_like Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. The macro domains in this family show similarity to Af1521, a protein from Archaeoglobus fulgidus containing a stand-alone macro domain. Af1521 binds ADP-ribose and exhibits phosphatase activity toward Appr-1"-p. Also included in this family are the N-terminal (or first) macro domains
Probab=23.88 E-value=3.4e+02 Score=20.91 Aligned_cols=66 Identities=21% Similarity=0.260 Sum_probs=45.4
Q ss_pred HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEEEccCHHHHHHHH
Q 025988 44 QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL--GINKVFLVAKDFGARPAYLFA 112 (245)
Q Consensus 44 ~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a 112 (245)
.+....+.+++-+++-..|.|.-.-|.+ ...+.+.+.+.++++.- .+++|+++.++---.-+++-|
T Consensus 104 ~L~~a~~~~~~SIA~P~lgtG~~g~p~~---~~a~~~~~~i~~fl~~~~~~l~~I~~v~~~~~~~~~~~~a 171 (175)
T cd02907 104 SLRKAEELGLRSIAIPAISSGIFGFPLE---RCVETIVEAVKEFLETKGSALKEIYLVDYDEQTVEAFEKA 171 (175)
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCHH---HHHHHHHHHHHHHHHhcCCCccEEEEEECCHHHHHHHHHH
Confidence 3444456689999999999887655542 34556666777777753 467899999887666665543
No 334
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=23.65 E-value=4.9e+02 Score=22.65 Aligned_cols=86 Identities=21% Similarity=0.184 Sum_probs=55.1
Q ss_pred CCCceEEEEcCCCCCccc--hHHHHHHHHHCCcE--EEEeCCC--CCCCCC------------CC--------CCCCCCC
Q 025988 23 TGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFR--AIAPDYR--GYGLSD------------PP--------AEPEKAS 76 (245)
Q Consensus 23 ~~~~~vl~lHG~~~~~~~--~~~~~~~l~~~g~~--via~d~~--G~G~s~------------~~--------~~~~~~~ 76 (245)
.|.+.+|=+-|.|+...+ -..+...|.+.|++ |+++|.- =.|.|- .| .....-.
T Consensus 48 tG~a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lGG 127 (323)
T COG1703 48 TGNAHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLGG 127 (323)
T ss_pred CCCCcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccchh
Confidence 344478999999987665 56677788888876 6888853 233331 11 1111224
Q ss_pred HHHHHHHHHHHHHHhCCCcEEE--EEEccCHHHH
Q 025988 77 FKDITNDLLATLDHLGINKVFL--VAKDFGARPA 108 (245)
Q Consensus 77 ~~~~~~~i~~~l~~l~~~~~~l--vGhS~Gg~~a 108 (245)
+..-..++..+++..|.+.+++ ||--.+=.-.
T Consensus 128 lS~at~~~i~~ldAaG~DvIIVETVGvGQsev~I 161 (323)
T COG1703 128 LSRATREAIKLLDAAGYDVIIVETVGVGQSEVDI 161 (323)
T ss_pred hhHHHHHHHHHHHhcCCCEEEEEecCCCcchhHH
Confidence 5566778999999999998877 5544443333
No 335
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=23.52 E-value=1.9e+02 Score=23.75 Aligned_cols=48 Identities=23% Similarity=0.410 Sum_probs=28.2
Q ss_pred hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 025988 41 WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (245)
Q Consensus 41 ~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lv 99 (245)
.++.+..|.++|++|.-..+.- + .+...+.+.+..+++..+++.+.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~------~-----~~~~s~~~~L~~~~~~~~~~~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDD------P-----ENTQSFEDALARALKQHGIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT-------T-----T--SSHHHHHHHHHHHH----EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCC------c-----cccccHHHHHHHHHHHcCCCEEEEE
Confidence 4667788989999999998772 1 1122356778888888898888775
No 336
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=23.51 E-value=1.5e+02 Score=22.22 Aligned_cols=42 Identities=17% Similarity=0.104 Sum_probs=28.3
Q ss_pred eEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCCCCCCCCCC
Q 025988 27 VVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDP 68 (245)
Q Consensus 27 ~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~~G~G~s~~ 68 (245)
++|.+-|...+.-+ -+.++..|.++||+|.++=.-+||+..-
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 47788888777766 4678888998999999776666665543
No 337
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=22.77 E-value=1.1e+02 Score=25.44 Aligned_cols=20 Identities=20% Similarity=0.090 Sum_probs=17.5
Q ss_pred EEEEEccCHHHHHHHHHhCC
Q 025988 97 FLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 97 ~lvGhS~Gg~~a~~~a~~~p 116 (245)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999988754
No 338
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=22.44 E-value=83 Score=27.08 Aligned_cols=30 Identities=17% Similarity=0.041 Sum_probs=22.5
Q ss_pred HHHHhCCCcEEEEEEccCHHHHHHHHHhCC
Q 025988 87 TLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 87 ~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
.+.+.++..-++.|-|.|+.+|..++....
T Consensus 90 aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 90 ALWEQDLLPRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred HHHHcCCCCCEEEEEcHHHHHHHHHHcCCc
Confidence 333446666689999999999998886543
No 339
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=22.39 E-value=4e+02 Score=26.57 Aligned_cols=90 Identities=22% Similarity=0.179 Sum_probs=53.2
Q ss_pred CCccchHHHHHHHHHCCcEEEEeC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCcEEEEEEccCHHH
Q 025988 36 EIWYSWRHQMVAVAAAGFRAIAPD-----YRGYGLSDPPAEPEKASFKDITNDLLATLDHLG---INKVFLVAKDFGARP 107 (245)
Q Consensus 36 ~~~~~~~~~~~~l~~~g~~via~d-----~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~---~~~~~lvGhS~Gg~~ 107 (245)
+|..+-|.+.+...++.=-||-+| .|-.|.|... .--++..+..+.+-+|.+. .+.++++|-.-===
T Consensus 748 qSE~NVR~VFerAR~A~PCVIFFDELDSlAP~RG~sGDS----GGVMDRVVSQLLAELDgls~~~s~~VFViGATNRPD- 822 (953)
T KOG0736|consen 748 QSEENVREVFERARSAAPCVIFFDELDSLAPNRGRSGDS----GGVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPD- 822 (953)
T ss_pred chHHHHHHHHHHhhccCCeEEEeccccccCccCCCCCCc----cccHHHHHHHHHHHhhcccCCCCCceEEEecCCCcc-
Confidence 333444455444444445567777 3444444321 2357777888888887774 45788888432111
Q ss_pred HHHHHHhCCcceeEEEEeCCCCC
Q 025988 108 AYLFALLHPERVSGVITLGVPFI 130 (245)
Q Consensus 108 a~~~a~~~p~~v~~lv~~~~~~~ 130 (245)
.+.=|...|.|+++++.+++.-.
T Consensus 823 LLDpALLRPGRFDKLvyvG~~~d 845 (953)
T KOG0736|consen 823 LLDPALLRPGRFDKLVYVGPNED 845 (953)
T ss_pred ccChhhcCCCccceeEEecCCcc
Confidence 12335567889999999987643
No 340
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=21.96 E-value=5.3e+02 Score=22.38 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=40.7
Q ss_pred HHHHHCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcc-CHHHHHHHHHhC
Q 025988 46 VAVAAAGF-RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF-GARPAYLFALLH 115 (245)
Q Consensus 46 ~~l~~~g~-~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~-Gg~~a~~~a~~~ 115 (245)
+.+...|. +|+..|.+. ..|+.+.+++.+.++++..+...+++++++. |--++-++|++.
T Consensus 42 ~~~~~~Gad~V~~~~~~~----------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 42 AQAIQLGANHVWKLSGKP----------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHhcCCCEEEEecCcc----------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 34444554 677766641 1267788999999999887655688888765 555667777664
No 341
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=21.86 E-value=1.1e+02 Score=23.49 Aligned_cols=31 Identities=29% Similarity=0.244 Sum_probs=24.1
Q ss_pred CceEEEEcCCCCCccchHHHHHHHHHCCcEEEE
Q 025988 25 PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIA 57 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~~~~~~~l~~~g~~via 57 (245)
.+++|+.+|.+.. .+..+++.|.+.|.+++.
T Consensus 41 ~~pLVCt~G~p~~--A~~~LL~~L~~~g~~l~y 71 (152)
T PF09664_consen 41 CPPLVCTSGQPSA--AARRLLDRLAAAGARLYY 71 (152)
T ss_pred CCeEEEcCCcHHH--HHHHHHHHHHhCCCEEEE
Confidence 3499999999866 556788999888876653
No 342
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.73 E-value=1.2e+02 Score=25.22 Aligned_cols=22 Identities=18% Similarity=0.129 Sum_probs=18.6
Q ss_pred cEEEEEEccCHHHHHHHHHhCC
Q 025988 95 KVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 95 ~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
.-.++|-|.|+.++..+++..+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987665
No 343
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=21.70 E-value=1.1e+02 Score=22.34 Aligned_cols=14 Identities=14% Similarity=0.287 Sum_probs=10.6
Q ss_pred HHHHHHCCcEEEEe
Q 025988 45 MVAVAAAGFRAIAP 58 (245)
Q Consensus 45 ~~~l~~~g~~via~ 58 (245)
...|.+.|++|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 35677889999865
No 344
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.27 E-value=1.5e+02 Score=25.66 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCC----CcEEEEEEc--cCHHHHHHHHHh
Q 025988 81 TNDLLATLDHLGI----NKVFLVAKD--FGARPAYLFALL 114 (245)
Q Consensus 81 ~~~i~~~l~~l~~----~~~~lvGhS--~Gg~~a~~~a~~ 114 (245)
+..+.+++++.++ +++.+||.| ||..++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5567788888754 579999986 999999888765
No 345
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.26 E-value=1.1e+02 Score=25.24 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=27.4
Q ss_pred eEEEEcCCCCCccc--hHHHHHHHHHCCcEEEEeCC
Q 025988 27 VVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDY 60 (245)
Q Consensus 27 ~vl~lHG~~~~~~~--~~~~~~~l~~~g~~via~d~ 60 (245)
++|++-|.|+++.. -+.++..|.+.+.+|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 58899999998876 45678888888888887654
No 346
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=21.23 E-value=2.6e+02 Score=24.53 Aligned_cols=97 Identities=16% Similarity=0.153 Sum_probs=55.6
Q ss_pred eEEEEcCCCCCccchHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCHH
Q 025988 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (245)
Q Consensus 27 ~vl~lHG~~~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~ 106 (245)
+|.++.--| +..|..+-+.+..+++.-.-.=++-||..-.. ....+...-...+..++..+.-.+++|||-| |=.
T Consensus 215 pvfYvSnSP--w~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~--i~~sga~rK~~~l~nil~~~p~~kfvLVGDs-GE~ 289 (373)
T COG4850 215 PVFYVSNSP--WQLFPTLQEFITNRNFPYGPLLLRRWGGVLDN--IIESGAARKGQSLRNILRRYPDRKFVLVGDS-GEH 289 (373)
T ss_pred CeEEecCCh--hHhHHHHHHHHhcCCCCCCchhHhhcCCcccc--cccchhhhcccHHHHHHHhCCCceEEEecCC-CCc
Confidence 455554333 33455555555555555555555555532111 1111222223456668888888999999966 432
Q ss_pred ---HHHHHHHhCCcceeEEEEeCCC
Q 025988 107 ---PAYLFALLHPERVSGVITLGVP 128 (245)
Q Consensus 107 ---~a~~~a~~~p~~v~~lv~~~~~ 128 (245)
|=..++..+|+||.++.+=+..
T Consensus 290 DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 290 DPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred CHHHHHHHHHhCccceeeEeeeecc
Confidence 3335678899999999987665
No 347
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]
Probab=21.07 E-value=4.5e+02 Score=22.80 Aligned_cols=53 Identities=32% Similarity=0.495 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccCHHHHHHHHH-hCCc---ceeEEEEeCCCCCCCC
Q 025988 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLFAL-LHPE---RVSGVITLGVPFIPPG 133 (245)
Q Consensus 78 ~~~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~-~~p~---~v~~lv~~~~~~~~~~ 133 (245)
....+.+.+.+.+.. +.+.++. .|-..-+.+|. ..|+ +++.+|+|++.+..++
T Consensus 102 ~~A~~~ii~~l~~~~-g~vtlva--~GPLTNiAlAl~~~P~i~~~ik~iviMGGa~~~~G 158 (311)
T COG1957 102 KHAVDAIIDTLMANP-GEVTLVA--TGPLTNIALALRKDPEIAKRIKEIVIMGGAFFVPG 158 (311)
T ss_pred CcHHHHHHHHHHhCC-CcEEEEe--cCChHHHHHHHHhCcchhhhhcEEEEecCccCCCC
Confidence 344556666665544 7888886 55555444443 3565 8999999999887655
No 348
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.99 E-value=1.4e+02 Score=22.38 Aligned_cols=27 Identities=15% Similarity=0.284 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccCH
Q 025988 79 DITNDLLATLDHLGINKVFLVAKDFGA 105 (245)
Q Consensus 79 ~~~~~i~~~l~~l~~~~~~lvGhS~Gg 105 (245)
+....+.-.+..++.+.++++||+-=|
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg 67 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCG 67 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCc
Confidence 345667777788999999999997433
No 349
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.91 E-value=1.3e+02 Score=25.17 Aligned_cols=22 Identities=14% Similarity=-0.121 Sum_probs=18.4
Q ss_pred cEEEEEEccCHHHHHHHHHhCC
Q 025988 95 KVFLVAKDFGARPAYLFALLHP 116 (245)
Q Consensus 95 ~~~lvGhS~Gg~~a~~~a~~~p 116 (245)
.-.++|-|.|+.++..+++..+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568999999999999888764
No 350
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=20.82 E-value=2.4e+02 Score=26.34 Aligned_cols=77 Identities=18% Similarity=0.212 Sum_probs=53.9
Q ss_pred eEEEEcCCC-CCccchHHHHHHHHHCCcEEEEeCCCCCCCCCC--------CC---------------CCCCCCHHHHHH
Q 025988 27 VVVFLHGFP-EIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDP--------PA---------------EPEKASFKDITN 82 (245)
Q Consensus 27 ~vl~lHG~~-~~~~~~~~~~~~l~~~g~~via~d~~G~G~s~~--------~~---------------~~~~~~~~~~~~ 82 (245)
-++.+-|++ +..+.-+++.+.|++.+-+.+-+++++-|.-.. |. .....+-.++-+
T Consensus 98 Kkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIEe 177 (831)
T PRK15180 98 KKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQ 177 (831)
T ss_pred eeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHHH
Confidence 477888876 444556778888888887777788888776543 11 001124445566
Q ss_pred HHHHHHHHhCCCcEEEEEEcc
Q 025988 83 DLLATLDHLGINKVFLVAKDF 103 (245)
Q Consensus 83 ~i~~~l~~l~~~~~~lvGhS~ 103 (245)
|+.++..-||.++|.+|-|.-
T Consensus 178 DmmeIVqLLGk~rVvfVTHVN 198 (831)
T PRK15180 178 DMMEIVQLLGRDRVMFMTHVD 198 (831)
T ss_pred HHHHHHHHhCCCcEEEEEeec
Confidence 888888888999999999963
No 351
>PRK06696 uridine kinase; Validated
Probab=20.71 E-value=4.5e+02 Score=21.06 Aligned_cols=79 Identities=11% Similarity=0.101 Sum_probs=43.8
Q ss_pred CceEEEEcCCCCCccch--HHHHHHHHHCCcEEEEeCCCCCCCCC---------CCCC--CCCCCHHHHHHHHHHHHHHh
Q 025988 25 PNVVVFLHGFPEIWYSW--RHQMVAVAAAGFRAIAPDYRGYGLSD---------PPAE--PEKASFKDITNDLLATLDHL 91 (245)
Q Consensus 25 ~~~vl~lHG~~~~~~~~--~~~~~~l~~~g~~via~d~~G~G~s~---------~~~~--~~~~~~~~~~~~i~~~l~~l 91 (245)
.|.||.+-|.+++..+- +.++..|...|..|+.+.+-+|-.+. .+.+ ...++.+.+.+.+.+.++.-
T Consensus 21 ~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~~Ddf~~~~~~r~~~~~~~~~g~~~~~~d~~~L~~~l~~~l~~~ 100 (223)
T PRK06696 21 RPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRASIDDFHNPRVIRYRRGRESAEGYYEDAYDYTALRRLLLDPLGPN 100 (223)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeccccccCCHHHHHHcCCCChhhcCccccCHHHHHHHHHhhccCC
Confidence 34999999999888763 44566676667788774433332221 1111 12456666666666554322
Q ss_pred CCCcEEEEEEcc
Q 025988 92 GINKVFLVAKDF 103 (245)
Q Consensus 92 ~~~~~~lvGhS~ 103 (245)
+...+-..-|++
T Consensus 101 ~~~~~~~~~~d~ 112 (223)
T PRK06696 101 GDRQYRTASHDL 112 (223)
T ss_pred CceeEeeeeecc
Confidence 222344445554
No 352
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.38 E-value=1.4e+02 Score=21.63 Aligned_cols=29 Identities=10% Similarity=0.202 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCHHHH
Q 025988 80 ITNDLLATLDHLGINKVFLVAKDFGARPA 108 (245)
Q Consensus 80 ~~~~i~~~l~~l~~~~~~lvGhS~Gg~~a 108 (245)
....+.-.+..++.+.++++||+=-|++.
T Consensus 45 ~~~sl~~av~~l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 45 VLASLEYAVEVLGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred HHHHHHHHHHhhCCCEEEEEccCCCcHHH
Confidence 45667777788999999999996444433
Done!