Query 025989
Match_columns 245
No_of_seqs 174 out of 626
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 22:09:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025989.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025989hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w2n_P Proprotein convertase s 99.4 7E-14 2.4E-18 110.8 4.7 75 111-191 38-112 (114)
2 3cnq_P Subtilisin BPN'; unclea 99.0 1.1E-09 3.8E-14 80.2 7.3 67 111-192 9-75 (80)
3 2qtw_A Proprotein convertase s 99.0 5.5E-10 1.9E-14 90.1 6.1 75 111-191 48-122 (124)
4 2p4e_P Proprotein convertase s 98.3 5E-07 1.7E-11 90.7 4.8 102 111-218 76-200 (692)
5 1v5i_B POIA1, IA-1=serine prot 98.1 1.2E-05 4.1E-10 59.0 7.2 69 111-191 3-74 (76)
6 3t41_A Epidermin leader peptid 97.9 6E-05 2.1E-09 70.3 9.9 95 104-217 38-167 (471)
7 3afg_A Subtilisin-like serine 97.5 8.1E-05 2.8E-09 71.9 5.3 67 150-217 60-160 (539)
8 2z2z_A TK-subtilisin precursor 97.1 0.00037 1.3E-08 64.1 4.4 67 150-217 24-125 (395)
9 2z30_B TK-subtilisin; thermoco 94.7 0.025 8.6E-07 40.0 3.5 42 148-190 21-62 (65)
10 3vta_A Cucumisin; subtilisin-l 85.4 0.16 5.5E-06 49.6 -0.0 24 194-217 17-43 (621)
11 3i6s_A Subtilisin-like proteas 69.3 1.9 6.4E-05 42.7 2.0 23 195-217 20-45 (649)
12 2oxa_A Extracellular serine pr 40.8 5 0.00017 38.6 -0.4 55 164-218 4-92 (600)
13 1y7p_A Hypothetical protein AF 30.6 17 0.00058 32.0 1.3 32 169-203 61-92 (223)
14 1r6v_A Subtilisin-like serine 25.8 56 0.0019 32.6 4.2 39 151-190 54-98 (671)
15 4eqa_C PA1845 protein, putativ 22.4 20 0.00068 29.0 0.2 31 185-215 44-75 (153)
16 3vpj_E TSE1-specific immunity 21.5 21 0.00071 29.7 0.1 31 185-215 83-114 (192)
17 1xf1_A C5A peptidase, SCP; hyd 20.3 30 0.001 35.4 1.0 22 196-217 14-38 (926)
18 3ftj_A MACB, macrolide export 20.3 47 0.0016 26.5 2.0 24 165-188 33-56 (226)
No 1
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.43 E-value=7e-14 Score=110.82 Aligned_cols=75 Identities=17% Similarity=0.144 Sum_probs=62.1
Q ss_pred eeEEEEecCCCCCCCCchhhHHHHHHHHHHhhCChhhhhcceeEEecccceeeeeecCHHHHHhhcCCCCeEEEeCCCCC
Q 025989 111 EHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYV 190 (245)
Q Consensus 111 ktYIVyMd~p~~~~ps~~~~~~~h~s~LaSVLgS~eeAk~sIlYSYt~sfnGFAArLTeEEAe~Lk~lPGVVSVfPDs~l 190 (245)
+.|||+|+.... ...+..|++||.+++++ +.+...++|+|++.|+||+|+|+++|+++|+++|+|++|.||+.+
T Consensus 38 ~~YIV~lk~~~~-----~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v 111 (114)
T 2w2n_P 38 GTYVVVLKEETH-----LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 111 (114)
T ss_dssp EEEEEEECTTCC-----HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CcEEEEECCCCC-----HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceE
Confidence 789999975432 23456788898888764 234567999999999999999999999999999999999999865
Q ss_pred C
Q 025989 191 D 191 (245)
Q Consensus 191 k 191 (245)
+
T Consensus 112 ~ 112 (114)
T 2w2n_P 112 F 112 (114)
T ss_dssp E
T ss_pred e
Confidence 4
No 2
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.98 E-value=1.1e-09 Score=80.19 Aligned_cols=67 Identities=12% Similarity=0.087 Sum_probs=50.7
Q ss_pred eeEEEEecCCCCCCCCchhhHHHHHHHHHHhhCChhhhhcceeEEecccceeeeeecCHHHHHhhcCCCCeEEEeCCCCC
Q 025989 111 EHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYV 190 (245)
Q Consensus 111 ktYIVyMd~p~~~~ps~~~~~~~h~s~LaSVLgS~eeAk~sIlYSYt~sfnGFAArLTeEEAe~Lk~lPGVVSVfPDs~l 190 (245)
+.|||.+..... . +..+..+.... ..+++|+|++ |+||+|+|++++++.|+++|+|..|.||..+
T Consensus 9 ~~YIV~~k~~~~--~------~~~~~~~~~~~------g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v 73 (80)
T 3cnq_P 9 KKYIVGFKQGFK--S------CAKKEDVISEK------GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLY 73 (80)
T ss_dssp CEEEEEECTTCC--S------HHHHHHHHHTT------TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEE
T ss_pred CCEEEEECCCCC--h------HHHHHHHHHHc------CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEE
Confidence 689999975432 1 11122222222 3468999998 9999999999999999999999999999876
Q ss_pred CC
Q 025989 191 DP 192 (245)
Q Consensus 191 k~ 192 (245)
++
T Consensus 74 ~~ 75 (80)
T 3cnq_P 74 RA 75 (80)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 3
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.98 E-value=5.5e-10 Score=90.09 Aligned_cols=75 Identities=17% Similarity=0.144 Sum_probs=55.6
Q ss_pred eeEEEEecCCCCCCCCchhhHHHHHHHHHHhhCChhhhhcceeEEecccceeeeeecCHHHHHhhcCCCCeEEEeCCCCC
Q 025989 111 EHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYV 190 (245)
Q Consensus 111 ktYIVyMd~p~~~~ps~~~~~~~h~s~LaSVLgS~eeAk~sIlYSYt~sfnGFAArLTeEEAe~Lk~lPGVVSVfPDs~l 190 (245)
..|||.|..... ...+..|.+++.+++... .....+.|+|++.|+||+|+|++++++.|+++|+|.+|.||..+
T Consensus 48 ~~YIV~~K~~~~-----~~~~~~~~~~l~~~~~~r-~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v 121 (124)
T 2qtw_A 48 GTYVVVLKEETH-----LSQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 121 (124)
T ss_dssp EEEEEEECTTCC-----HHHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CCEEEEECCCCC-----HHHHHHHHHHHHHHHhhc-ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceE
Confidence 789999975432 123445555555532100 01246899999999999999999999999999999999999865
Q ss_pred C
Q 025989 191 D 191 (245)
Q Consensus 191 k 191 (245)
+
T Consensus 122 ~ 122 (124)
T 2qtw_A 122 F 122 (124)
T ss_dssp E
T ss_pred e
Confidence 4
No 4
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=98.27 E-value=5e-07 Score=90.70 Aligned_cols=102 Identities=20% Similarity=0.159 Sum_probs=52.7
Q ss_pred eeEEEEecCCCCCCCCchhhHHHHHHHHHHhhCChhhhhcceeEEecccceeeeeecCHHHHHhhcCCCCeEEEeCCCCC
Q 025989 111 EHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYV 190 (245)
Q Consensus 111 ktYIVyMd~p~~~~ps~~~~~~~h~s~LaSVLgS~eeAk~sIlYSYt~sfnGFAArLTeEEAe~Lk~lPGVVSVfPDs~l 190 (245)
..|||.|...... ...+.+.+++...+.. .....++.|+|++.|+||+++|+++++++|+++|+|.+|.||..+
T Consensus 76 g~YIV~lk~~~~~-----~~~~~~~~~l~a~~~~-~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v 149 (692)
T 2p4e_P 76 GTYVVVLKEETHL-----SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 149 (692)
T ss_dssp EEEEEEECTTCCH-----HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CcEEEEECCCCCH-----HHHHHHHHHHHHHHhh-cccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEecccc
Confidence 4899999754321 2233333444332210 001246899999999999999999999999999999999999844
Q ss_pred CC---------C----------cc-cCCCccee---eceeeeCCccccccC
Q 025989 191 DP---------E----------NK-DYGAELFV---NGEIVQRSPERQRRV 218 (245)
Q Consensus 191 k~---------~----------~k-dyG~d~~I---dggI~Pespsf~d~~ 218 (245)
.. + .. .-|.++.| |+||++.+|.|.+..
T Consensus 150 ~~~~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~ 200 (692)
T 2p4e_P 150 FAQSIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV 200 (692)
T ss_dssp EEC------------------------------------------------
T ss_pred ccCCCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCce
Confidence 22 1 11 23556765 999999999998763
No 5
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.05 E-value=1.2e-05 Score=58.96 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=52.8
Q ss_pred eeEEEEecCCCCCCCCchhhHHHHHHHHHHhhCChhhhhcceeEEe-cccceeeeeecCHHHHHhhcCC--CCeEEEeCC
Q 025989 111 EHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVS-CERYFGFGCELDEETSNKLEGL--PGVLFVLPD 187 (245)
Q Consensus 111 ktYIVyMd~p~~~~ps~~~~~~~h~s~LaSVLgS~eeAk~sIlYSY-t~sfnGFAArLTeEEAe~Lk~l--PGVVSVfPD 187 (245)
..|||.|.... + ...++.|..++...- ..+.|.| .+.|+||+|.|++++++.|+.. |.|..|=+|
T Consensus 3 ~sYIV~lk~~~---~--~~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 3 GKFIVIFKNDV---S--EDKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp EEEEEEECTTC---C--HHHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred ceEEEEECCCC---C--HHHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 67999996432 1 234566666665532 2478999 4899999999999999999999 889999998
Q ss_pred CCCC
Q 025989 188 SYVD 191 (245)
Q Consensus 188 s~lk 191 (245)
....
T Consensus 71 ~~v~ 74 (76)
T 1v5i_B 71 HVAH 74 (76)
T ss_dssp CEEE
T ss_pred cEEe
Confidence 8653
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=97.85 E-value=6e-05 Score=70.26 Aligned_cols=95 Identities=6% Similarity=0.061 Sum_probs=65.5
Q ss_pred CCCCCCceeEEEEecCCCCCCCCchhhHHHHHHHHHHhhCChhhhhcceeEEecccceeeeeecCHHHHHhhcC-CCCeE
Q 025989 104 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEG-LPGVL 182 (245)
Q Consensus 104 l~~gcd~ktYIVyMd~p~~~~ps~~~~~~~h~s~LaSVLgS~eeAk~sIlYSYt~sfnGFAArLTeEEAe~Lk~-lPGVV 182 (245)
.+.|-+.+.|||.+... ....+.+. ...-+++|.|. .++||+++|+++++++|++ +|+|.
T Consensus 38 ~~~~~~~~~yiv~~~~~-----------~~~~~~~~-------~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~ 98 (471)
T 3t41_A 38 YFQGSEELYYSVEYKNT-----------ATFNKLVK-------KKSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIK 98 (471)
T ss_dssp -----CCEEEEEEESCH-----------HHHHHHHH-------HHTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEE
T ss_pred eecCCCceEEEEEcCCH-----------HHHHHHHH-------hCCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCc
Confidence 45666778899964321 11112222 22345788885 4999999999999999999 99999
Q ss_pred EEeCCCCCCCC------------------------------ccc-CCCccee---eceeeeCCcccccc
Q 025989 183 FVLPDSYVDPE------------------------------NKD-YGAELFV---NGEIVQRSPERQRR 217 (245)
Q Consensus 183 SVfPDs~lk~~------------------------------~kd-yG~d~~I---dggI~Pespsf~d~ 217 (245)
+|.||..+.+. +.. -|.++.| |+||++.+|.|.+.
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~ 167 (471)
T 3t41_A 99 YINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNN 167 (471)
T ss_dssp EEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTT
T ss_pred EEEecceeccccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcC
Confidence 99999766541 112 2667777 99999999999975
No 7
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=97.50 E-value=8.1e-05 Score=71.91 Aligned_cols=67 Identities=19% Similarity=0.186 Sum_probs=55.7
Q ss_pred cceeEEecccceeeeeecCHHHHHhh-----------cCCCCeEEEeCCCCCCCC-------------------cc-cCC
Q 025989 150 KKIYNVSCERYFGFGCELDEETSNKL-----------EGLPGVLFVLPDSYVDPE-------------------NK-DYG 198 (245)
Q Consensus 150 ~sIlYSYt~sfnGFAArLTeEEAe~L-----------k~lPGVVSVfPDs~lk~~-------------------~k-dyG 198 (245)
.++.|.|+ .|+||+++|+++++++| +++|+|.+|.||..+++. +. ..|
T Consensus 60 ~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G 138 (539)
T 3afg_A 60 AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDG 138 (539)
T ss_dssp CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCCC
T ss_pred CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCCC
Confidence 45789996 69999999999999999 899999999999765431 12 356
Q ss_pred Cccee---eceeeeCCcccccc
Q 025989 199 AELFV---NGEIVQRSPERQRR 217 (245)
Q Consensus 199 ~d~~I---dggI~Pespsf~d~ 217 (245)
.++.| |+||...+|.|.++
T Consensus 139 ~gv~VaViDtGid~~Hpdl~~~ 160 (539)
T 3afg_A 139 SGITIGIIDTGIDASHPDLQGK 160 (539)
T ss_dssp TTCEEEEEESBCCTTSGGGTTT
T ss_pred CCcEEEEEecCCCCCChHHhCC
Confidence 67777 99999999999876
No 8
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=97.08 E-value=0.00037 Score=64.07 Aligned_cols=67 Identities=16% Similarity=0.072 Sum_probs=55.5
Q ss_pred cceeEEecccceeeeeecCHHHHHhhcCCCCeEEEeCCCCCCC------------------------C------cccCCC
Q 025989 150 KKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDP------------------------E------NKDYGA 199 (245)
Q Consensus 150 ~sIlYSYt~sfnGFAArLTeEEAe~Lk~lPGVVSVfPDs~lk~------------------------~------~kdyG~ 199 (245)
.++++.|.. ++||+++|+++++++|+++|+|..|.||..+++ + +..-|.
T Consensus 24 ~~v~~~~~~-~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~~G~ 102 (395)
T 2z2z_A 24 GHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSITDGS 102 (395)
T ss_dssp CEEEEECSS-SSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTCSSC
T ss_pred CEEEEEecc-CCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhcCCC
Confidence 457899975 999999999999999999999999999986532 1 122566
Q ss_pred c--cee---eceeeeCCcccccc
Q 025989 200 E--LFV---NGEIVQRSPERQRR 217 (245)
Q Consensus 200 d--~~I---dggI~Pespsf~d~ 217 (245)
+ +.| |+||.+.+|.|.+.
T Consensus 103 g~~v~VaViDtGid~~Hp~l~~~ 125 (395)
T 2z2z_A 103 VSVIQVAVLDTGVDYDHPDLAAN 125 (395)
T ss_dssp CTTCEEEEEESCBCTTCTTTGGG
T ss_pred CCcEEEEEEcCCCCCCChhHhhc
Confidence 6 666 99999999999876
No 9
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=94.72 E-value=0.025 Score=40.01 Aligned_cols=42 Identities=19% Similarity=0.071 Sum_probs=37.0
Q ss_pred hhcceeEEecccceeeeeecCHHHHHhhcCCCCeEEEeCCCCC
Q 025989 148 AKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYV 190 (245)
Q Consensus 148 Ak~sIlYSYt~sfnGFAArLTeEEAe~Lk~lPGVVSVfPDs~l 190 (245)
..-+++|.|. .++|++|.|+++.+++|++.|||..|-+|...
T Consensus 21 ~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v 62 (65)
T 2z30_B 21 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQA 62 (65)
T ss_dssp GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEE
T ss_pred CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEE
Confidence 3456889985 69999999999999999999999999999754
No 10
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=85.43 E-value=0.16 Score=49.58 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=22.0
Q ss_pred cccCCCccee---eceeeeCCcccccc
Q 025989 194 NKDYGAELFV---NGEIVQRSPERQRR 217 (245)
Q Consensus 194 ~kdyG~d~~I---dggI~Pespsf~d~ 217 (245)
+..+|++|+| |+||||++|+|.|+
T Consensus 17 ~~~~G~gViVgViDTGId~~Hp~f~d~ 43 (621)
T 3vta_A 17 RSQVESNIVVGVLDTGIWPESPSFDDE 43 (621)
T ss_dssp CHHHHTTCEEEEEESCBCTTSGGGCCT
T ss_pred cCCCCCCCEEEEEecCCCCCChhhcCC
Confidence 5678999999 99999999999987
No 11
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=69.26 E-value=1.9 Score=42.66 Aligned_cols=23 Identities=22% Similarity=0.299 Sum_probs=20.6
Q ss_pred ccCCCccee---eceeeeCCcccccc
Q 025989 195 KDYGAELFV---NGEIVQRSPERQRR 217 (245)
Q Consensus 195 kdyG~d~~I---dggI~Pespsf~d~ 217 (245)
...|.+++| |+||||++|+|.|+
T Consensus 20 ~~~G~gViVaViDTGId~~Hp~f~d~ 45 (649)
T 3i6s_A 20 SGLGQDVIVAVLDSGIWPESASFQDD 45 (649)
T ss_dssp HGGGTTCEEEEEESCBCTTSGGGCCT
T ss_pred cCCCCCCEEEEEccCCCCCChhhccC
Confidence 458889998 99999999999985
No 12
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=40.78 E-value=5 Score=38.64 Aligned_cols=55 Identities=18% Similarity=0.128 Sum_probs=39.4
Q ss_pred eeecCHHHHHhhcCCCCeEEEeC--CCC----CCCCc------------------------c-cCCCccee---eceeee
Q 025989 164 GCELDEETSNKLEGLPGVLFVLP--DSY----VDPEN------------------------K-DYGAELFV---NGEIVQ 209 (245)
Q Consensus 164 AArLTeEEAe~Lk~lPGVVSVfP--Ds~----lk~~~------------------------k-dyG~d~~I---dggI~P 209 (245)
+|.|+++|...+....+++.+++ |.+ ..+.+ . --|.+|.| |+||.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~Dp~~~~qW~l~~~~~~~~~~~~~~~~~din~~~aw~~g~~G~gV~VaViDtGid~ 83 (600)
T 2oxa_A 4 CAPLTGKESGMDIGRSSTERCLPGANPLQDQQWYLLNSGQDGFSARGGIAGNDLNLWWAHRTGVLGHGVNVAVVDDGLAI 83 (600)
T ss_dssp CCCCCSCCTTCCCSTTCTTCCCCCCCTTGGGCTTTSCSSCCTTSSSCCCTTCSCCCHHHHHTTCSCTTCEEEEESSCCCT
T ss_pred ccCCccccccccCcchhhhccCCCCCCChhhccCccCCCcccccccCCCCccCcChHHHHhcCCCCCCcEEEEecCCcCC
Confidence 57899999999998888888775 111 11111 1 34567777 999999
Q ss_pred CCccccccC
Q 025989 210 RSPERQRRV 218 (245)
Q Consensus 210 espsf~d~~ 218 (245)
.+|.|.+..
T Consensus 84 ~Hpdl~~~~ 92 (600)
T 2oxa_A 84 AHPDLADNV 92 (600)
T ss_dssp TCTTTGGGB
T ss_pred CCcchhhcc
Confidence 999998764
No 13
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=30.56 E-value=17 Score=32.00 Aligned_cols=32 Identities=6% Similarity=0.211 Sum_probs=27.3
Q ss_pred HHHHHhhcCCCCeEEEeCCCCCCCCcccCCCccee
Q 025989 169 EETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFV 203 (245)
Q Consensus 169 eEEAe~Lk~lPGVVSVfPDs~lk~~~kdyG~d~~I 203 (245)
++-.++|+++|||..|. ..+.+++-||.-+||
T Consensus 61 e~LL~kLrkI~gV~~V~---Rv~~~~~i~gkrvii 92 (223)
T 1y7p_A 61 EKILERVKTFDYIIEIE---EEESFERVFGKRVII 92 (223)
T ss_dssp HHHHHHHHTCTTEEEEE---EECCHHHHTCEEEEE
T ss_pred HHHHHHHhCCCCeeEEE---EEcchhhhcCcEEEE
Confidence 45567999999999998 346779999999999
No 14
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=25.82 E-value=56 Score=32.56 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=27.8
Q ss_pred ceeEEecccceeeeeecCH---HH-HHhhc--CCCCeEEEeCCCCC
Q 025989 151 KIYNVSCERYFGFGCELDE---ET-SNKLE--GLPGVLFVLPDSYV 190 (245)
Q Consensus 151 sIlYSYt~sfnGFAArLTe---EE-Ae~Lk--~lPGVVSVfPDs~l 190 (245)
++++.+. .++++++++++ +| +++|+ +.|+|..|-||..+
T Consensus 54 ~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~ 98 (671)
T 1r6v_A 54 KVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKR 98 (671)
T ss_dssp EEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCC
T ss_pred eEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEE
Confidence 3566664 58899999875 33 45665 48999999998543
No 15
>4eqa_C PA1845 protein, putative uncharacterized protein; type VI secretion, T6S, antitoxin-toxin complex, unknown FUN; 1.60A {Pseudomonas aeruginosa} PDB: 4fgi_B
Probab=22.37 E-value=20 Score=28.96 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=23.0
Q ss_pred eCCCCCCCCcccCCCccee-eceeeeCCcccc
Q 025989 185 LPDSYVDPENKDYGAELFV-NGEIVQRSPERQ 215 (245)
Q Consensus 185 fPDs~lk~~~kdyG~d~~I-dggI~Pespsf~ 215 (245)
||+...-+-+.|-|.|--| |||||-+-.-|-
T Consensus 44 fpeppvyladrdsgndcriedggiwsrggvfl 75 (153)
T 4eqa_C 44 FPEPPVYLADRDSGNDCRIEDGGIWSRGGVFL 75 (153)
T ss_dssp ECSCCEEEEETTTCCEEEECSCCCEEEEEEEE
T ss_pred CCCCCeEeeccCCCCcceeecCcEeecCcEEE
Confidence 4554444447888999888 999999877665
No 16
>3vpj_E TSE1-specific immunity protein; hydrolase-hydrolase inhibitor complex; 2.50A {Pseudomonas aeruginosa}
Probab=21.48 E-value=21 Score=29.72 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=22.6
Q ss_pred eCCCCCCCCcccCCCccee-eceeeeCCcccc
Q 025989 185 LPDSYVDPENKDYGAELFV-NGEIVQRSPERQ 215 (245)
Q Consensus 185 fPDs~lk~~~kdyG~d~~I-dggI~Pespsf~ 215 (245)
||+...-+-+.|-|.|--| |||||-+-.-|-
T Consensus 83 fpeppvyladrdsgndcriedggiwsrggvfl 114 (192)
T 3vpj_E 83 FPEPPVYLADRDSGNDCRIEDGGIWSRGGVFL 114 (192)
T ss_dssp ECSCCEEEEETTTSCEEEECSCCCEEEEEEEE
T ss_pred CCCCCeeeeccCCCCcceeccCceeecCcEEE
Confidence 4544333447888999888 999999877665
No 17
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=20.28 E-value=30 Score=35.37 Aligned_cols=22 Identities=14% Similarity=0.108 Sum_probs=19.2
Q ss_pred cCCCccee---eceeeeCCcccccc
Q 025989 196 DYGAELFV---NGEIVQRSPERQRR 217 (245)
Q Consensus 196 dyG~d~~I---dggI~Pespsf~d~ 217 (245)
..|.+++| |+||++++|.|...
T Consensus 14 ~~G~GV~VaVIDTGId~~Hp~f~~~ 38 (926)
T 1xf1_A 14 GKGAGTVVAVIDAGFDKNHEAWRLT 38 (926)
T ss_dssp CSCTTCEEEEEESCCTTCCCCCSCC
T ss_pred CCCCCcEEEEEecCCCCCCHhHcCC
Confidence 47888988 99999999999853
No 18
>3ftj_A MACB, macrolide export ATP-binding/permease protein MACB; macrolide-specific pump, ABC-type transporter; 2.00A {Actinobacillus actinomycetemcomitans}
Probab=20.27 E-value=47 Score=26.52 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=21.3
Q ss_pred eecCHHHHHhhcCCCCeEEEeCCC
Q 025989 165 CELDEETSNKLEGLPGVLFVLPDS 188 (245)
Q Consensus 165 ArLTeEEAe~Lk~lPGVVSVfPDs 188 (245)
..||++++++|+++|||..|-|-.
T Consensus 33 ~~lt~~d~~~l~~~p~V~~v~~~~ 56 (226)
T 3ftj_A 33 QNLKISDANTLSKQSYIQSVTPNT 56 (226)
T ss_dssp CCCBHHHHHHHHTSTTEEEEEEEE
T ss_pred CCCCHHHHHHHhcCCCceEEEEEE
Confidence 569999999999999999998853
Done!