Query 025992
Match_columns 245
No_of_seqs 117 out of 443
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 03:04:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025992.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025992hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 4.2E-97 1E-101 649.1 24.7 239 3-244 1-241 (248)
2 3iqu_A 14-3-3 protein sigma; s 100.0 1.9E-96 6E-101 641.4 22.5 234 1-237 3-236 (236)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 5.7E-96 2E-100 644.4 24.9 234 3-239 28-261 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 5.9E-94 2E-98 626.6 24.6 233 3-238 2-234 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 7.6E-94 2.6E-98 633.3 24.1 238 4-243 6-244 (260)
6 2npm_A 14-3-3 domain containin 100.0 1.4E-92 4.8E-97 624.7 24.8 232 5-239 27-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 1.1E-89 3.8E-94 605.9 15.5 227 5-242 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 3.1E-81 1.1E-85 541.5 20.4 217 5-234 2-226 (227)
9 3edt_B KLC 2, kinesin light ch 95.6 0.68 2.3E-05 37.2 16.7 59 150-209 143-201 (283)
10 3n71_A Histone lysine methyltr 94.8 0.4 1.4E-05 45.2 13.0 100 96-209 326-425 (490)
11 3vtx_A MAMA; tetratricopeptide 94.7 1.1 3.7E-05 34.3 17.2 163 7-205 6-169 (184)
12 3u3w_A Transcriptional activat 94.6 1.7 5.9E-05 36.4 17.5 58 150-209 171-228 (293)
13 3qww_A SET and MYND domain-con 93.6 0.87 3E-05 42.1 12.6 114 96-227 315-428 (433)
14 3nf1_A KLC 1, kinesin light ch 93.6 2.5 8.4E-05 34.5 21.4 187 7-209 28-227 (311)
15 3qwp_A SET and MYND domain-con 93.4 0.4 1.4E-05 44.2 9.9 58 151-209 346-403 (429)
16 3u4t_A TPR repeat-containing p 92.8 3.2 0.00011 33.4 14.2 53 152-205 197-249 (272)
17 3edt_B KLC 2, kinesin light ch 92.4 2.1 7.2E-05 34.1 12.0 57 151-208 102-158 (283)
18 2qfc_A PLCR protein; TPR, HTH, 92.4 4.2 0.00015 33.9 16.6 73 123-207 154-226 (293)
19 3qww_A SET and MYND domain-con 92.4 0.76 2.6E-05 42.5 10.2 59 151-210 315-373 (433)
20 3n71_A Histone lysine methyltr 91.7 0.95 3.3E-05 42.5 10.2 59 151-210 326-384 (490)
21 4g1t_A Interferon-induced prot 91.4 7.1 0.00024 34.3 16.2 49 151-204 351-399 (472)
22 3fp2_A TPR repeat-containing p 91.3 6.7 0.00023 34.9 15.1 49 150-207 444-492 (537)
23 3ulq_A Response regulator aspa 90.7 2.2 7.5E-05 37.0 11.0 74 122-208 101-174 (383)
24 3hym_B Cell division cycle pro 90.4 6.4 0.00022 32.2 15.4 46 150-204 252-297 (330)
25 3q15_A PSP28, response regulat 89.9 1.5 5.1E-05 38.2 9.2 74 122-208 99-172 (378)
26 3qwp_A SET and MYND domain-con 89.2 1.2 4.1E-05 41.0 8.3 58 151-209 304-361 (429)
27 3nf1_A KLC 1, kinesin light ch 88.4 8.8 0.0003 31.0 15.8 184 8-206 71-307 (311)
28 4gcn_A Protein STI-1; structur 88.4 1.4 4.7E-05 32.5 6.8 48 151-207 25-72 (127)
29 1fch_A Peroxisomal targeting s 88.3 10 0.00035 31.7 15.9 59 7-70 99-157 (368)
30 4i17_A Hypothetical protein; T 88.3 8 0.00027 30.4 13.0 60 7-70 8-67 (228)
31 3q15_A PSP28, response regulat 87.6 13 0.00044 32.0 16.9 54 150-207 238-291 (378)
32 2pl2_A Hypothetical conserved 87.5 9.5 0.00033 30.3 13.4 59 7-70 6-64 (217)
33 2y4t_A DNAJ homolog subfamily 87.1 14 0.00048 31.9 14.9 47 150-205 311-357 (450)
34 4abn_A Tetratricopeptide repea 86.9 18 0.0006 32.9 17.7 173 7-205 103-286 (474)
35 4a1s_A PINS, partner of inscut 86.3 15 0.00051 31.4 21.4 191 7-209 49-255 (411)
36 3sf4_A G-protein-signaling mod 85.0 16 0.00056 30.7 19.0 56 150-208 203-258 (406)
37 3sf4_A G-protein-signaling mod 84.9 16 0.00056 30.7 20.1 191 7-209 10-219 (406)
38 2gw1_A Mitochondrial precursor 84.7 20 0.00068 31.4 15.5 55 150-205 205-265 (514)
39 2y4t_A DNAJ homolog subfamily 84.6 19 0.00064 31.1 16.9 168 10-205 147-323 (450)
40 3ulq_A Response regulator aspa 84.3 19 0.00065 30.8 18.4 175 11-208 108-295 (383)
41 3rkv_A Putative peptidylprolyl 83.8 1.7 5.9E-05 32.8 5.3 54 151-205 28-91 (162)
42 3ro2_A PINS homolog, G-protein 83.3 16 0.00056 29.3 17.7 56 150-208 199-254 (338)
43 2ho1_A Type 4 fimbrial biogene 82.7 16 0.00054 28.8 14.3 59 7-70 38-96 (252)
44 3ieg_A DNAJ homolog subfamily 81.9 20 0.00068 29.4 18.8 47 150-205 288-334 (359)
45 4gco_A Protein STI-1; structur 81.7 4.5 0.00015 29.7 6.8 46 151-205 30-75 (126)
46 3ro2_A PINS homolog, G-protein 81.4 19 0.00066 28.9 20.6 190 7-209 6-215 (338)
47 2xpi_A Anaphase-promoting comp 81.3 30 0.001 31.1 19.5 47 150-205 532-578 (597)
48 3u3w_A Transcriptional activat 81.2 6.5 0.00022 32.7 8.5 53 151-207 132-185 (293)
49 2q7f_A YRRB protein; TPR, prot 81.0 17 0.0006 28.1 16.0 59 7-70 58-116 (243)
50 4eqf_A PEX5-related protein; a 80.6 24 0.00083 29.6 17.2 59 7-70 66-124 (365)
51 3ro3_A PINS homolog, G-protein 79.9 9.4 0.00032 27.1 8.0 56 151-209 66-121 (164)
52 3ieg_A DNAJ homolog subfamily 78.8 25 0.00087 28.7 18.1 168 10-206 124-301 (359)
53 2vq2_A PILW, putative fimbrial 78.7 19 0.00066 27.3 16.0 166 7-206 9-176 (225)
54 2gw1_A Mitochondrial precursor 78.6 33 0.0011 29.9 15.8 172 7-205 305-477 (514)
55 4a1s_A PINS, partner of inscut 78.3 30 0.001 29.4 17.9 182 8-208 88-294 (411)
56 4eqf_A PEX5-related protein; a 78.2 29 0.001 29.1 15.5 60 6-70 99-158 (365)
57 1xnf_A Lipoprotein NLPI; TPR, 78.2 23 0.0008 27.9 12.7 29 176-205 215-243 (275)
58 2xpi_A Anaphase-promoting comp 77.6 40 0.0014 30.3 19.7 55 150-206 491-545 (597)
59 4g1t_A Interferon-induced prot 77.2 5.4 0.00018 35.1 7.0 54 151-205 68-122 (472)
60 4gcn_A Protein STI-1; structur 77.1 7.5 0.00026 28.3 6.8 52 151-204 59-110 (127)
61 3hym_B Cell division cycle pro 76.4 29 0.00099 28.1 17.3 56 150-206 209-265 (330)
62 2q7f_A YRRB protein; TPR, prot 76.4 24 0.00083 27.2 11.6 60 7-71 24-83 (243)
63 1elr_A TPR2A-domain of HOP; HO 76.2 7.9 0.00027 26.6 6.5 53 151-205 55-107 (131)
64 2l6j_A TPR repeat-containing p 75.6 9.4 0.00032 25.8 6.6 45 151-204 21-65 (111)
65 3u4t_A TPR repeat-containing p 74.9 21 0.00073 28.3 9.5 60 7-71 4-63 (272)
66 2pl2_A Hypothetical conserved 74.5 30 0.001 27.3 18.6 47 6-56 39-85 (217)
67 3gw4_A Uncharacterized protein 74.3 10 0.00036 28.6 7.2 55 151-207 83-137 (203)
68 1na3_A Designed protein CTPR2; 74.3 13 0.00043 24.2 6.8 46 151-205 26-71 (91)
69 1hz4_A MALT regulatory protein 73.8 11 0.00038 32.0 7.9 55 151-206 110-164 (373)
70 3k9i_A BH0479 protein; putativ 73.6 11 0.00039 26.5 6.8 47 151-206 44-90 (117)
71 2qfc_A PLCR protein; TPR, HTH, 73.4 13 0.00044 30.8 8.1 189 8-221 77-277 (293)
72 2xev_A YBGF; tetratricopeptide 73.3 16 0.00055 25.4 7.6 71 151-233 56-126 (129)
73 1fch_A Peroxisomal targeting s 73.2 39 0.0013 28.0 18.7 58 7-69 65-122 (368)
74 2dba_A Smooth muscle cell asso 72.6 9.8 0.00033 27.0 6.3 49 151-205 45-93 (148)
75 3cv0_A Peroxisome targeting si 72.5 36 0.0012 27.4 16.2 27 8-34 23-49 (327)
76 3lf9_A 4E10_D0_1IS1A_001_C (T1 72.3 22 0.00074 27.3 8.1 49 20-69 11-60 (121)
77 4b4t_Q 26S proteasome regulato 72.2 46 0.0016 28.5 17.5 58 150-209 191-248 (434)
78 3sz7_A HSC70 cochaperone (SGT) 72.1 17 0.00056 27.1 7.8 46 151-205 62-107 (164)
79 2kck_A TPR repeat; tetratricop 72.0 14 0.00049 24.5 6.8 46 151-205 23-68 (112)
80 3qky_A Outer membrane assembly 71.1 38 0.0013 27.1 18.9 65 5-73 14-80 (261)
81 3uq3_A Heat shock protein STI1 70.8 34 0.0012 26.4 15.4 26 9-34 41-66 (258)
82 3uq3_A Heat shock protein STI1 70.1 36 0.0012 26.3 15.4 49 150-207 189-237 (258)
83 2kc7_A BFR218_protein; tetratr 70.0 18 0.00061 24.2 6.9 47 151-205 17-63 (99)
84 2xev_A YBGF; tetratricopeptide 69.8 20 0.00069 24.9 7.4 49 151-205 19-67 (129)
85 4gyw_A UDP-N-acetylglucosamine 68.8 89 0.003 30.4 16.2 167 7-211 10-179 (723)
86 1lyp_A CAP18; lipopolysacchari 68.6 11 0.00039 21.4 4.4 26 85-110 4-29 (32)
87 2ifu_A Gamma-SNAP; membrane fu 67.4 53 0.0018 27.3 12.4 52 150-204 171-222 (307)
88 4gco_A Protein STI-1; structur 67.2 18 0.00061 26.3 6.8 47 150-205 63-109 (126)
89 3upv_A Heat shock protein STI1 67.0 19 0.00065 25.3 6.8 46 151-205 21-66 (126)
90 2hr2_A Hypothetical protein; a 66.7 22 0.00076 28.2 7.6 55 150-206 27-86 (159)
91 3ro3_A PINS homolog, G-protein 65.9 32 0.0011 24.1 16.6 55 150-207 105-159 (164)
92 3k9i_A BH0479 protein; putativ 65.8 8.4 0.00029 27.2 4.6 50 151-206 7-56 (117)
93 2xcb_A PCRH, regulatory protei 65.3 28 0.00096 25.2 7.7 48 151-207 69-116 (142)
94 2lni_A Stress-induced-phosphop 64.8 23 0.00079 24.3 6.8 46 151-205 67-112 (133)
95 3q49_B STIP1 homology and U bo 64.0 23 0.00079 24.8 6.8 17 190-206 90-106 (137)
96 1elr_A TPR2A-domain of HOP; HO 63.4 26 0.00088 23.8 6.8 50 150-208 20-69 (131)
97 3upv_A Heat shock protein STI1 63.0 25 0.00086 24.6 6.8 48 151-207 55-102 (126)
98 3vtx_A MAMA; tetratricopeptide 62.5 23 0.00077 26.5 6.8 46 151-205 22-67 (184)
99 2vgx_A Chaperone SYCD; alterna 60.7 24 0.00082 26.3 6.6 47 151-206 72-118 (148)
100 1elw_A TPR1-domain of HOP; HOP 59.9 27 0.00093 23.2 6.3 46 151-205 55-100 (118)
101 3fp2_A TPR repeat-containing p 59.8 90 0.0031 27.3 17.9 53 153-205 214-271 (537)
102 1qqe_A Vesicular transport pro 59.6 27 0.00092 29.0 7.3 54 151-207 54-107 (292)
103 1elw_A TPR1-domain of HOP; HOP 59.1 36 0.0012 22.5 6.8 47 151-206 21-67 (118)
104 2vyi_A SGTA protein; chaperone 59.0 34 0.0012 23.1 6.8 47 151-206 63-109 (131)
105 2ifu_A Gamma-SNAP; membrane fu 59.0 77 0.0026 26.3 14.8 54 150-207 131-185 (307)
106 1ihg_A Cyclophilin 40; ppiase 58.9 11 0.00038 33.3 5.0 54 151-205 240-301 (370)
107 2vyi_A SGTA protein; chaperone 58.8 35 0.0012 23.0 6.8 47 151-206 29-75 (131)
108 1a17_A Serine/threonine protei 57.5 33 0.0011 24.6 6.8 46 151-205 64-109 (166)
109 3gyz_A Chaperone protein IPGC; 57.4 20 0.0007 27.3 5.7 47 150-205 86-132 (151)
110 2fbn_A 70 kDa peptidylprolyl i 56.7 37 0.0013 26.0 7.2 49 151-205 55-116 (198)
111 3caz_A BAR protein; thermo-aci 56.6 85 0.0029 26.1 10.7 111 12-166 100-210 (294)
112 2dba_A Smooth muscle cell asso 56.3 38 0.0013 23.7 6.8 46 151-205 82-127 (148)
113 4ga2_A E3 SUMO-protein ligase 56.3 34 0.0012 25.3 6.8 46 151-205 48-93 (150)
114 3as5_A MAMA; tetratricopeptide 55.3 55 0.0019 23.5 16.2 58 8-70 10-67 (186)
115 1xnf_A Lipoprotein NLPI; TPR, 55.1 54 0.0018 25.7 8.2 47 150-205 93-139 (275)
116 1na0_A Designed protein CTPR3; 54.3 45 0.0015 22.2 6.8 46 151-205 26-71 (125)
117 1a17_A Serine/threonine protei 53.9 42 0.0014 24.0 6.8 48 150-206 29-76 (166)
118 2e2e_A Formate-dependent nitri 52.9 41 0.0014 25.0 6.8 46 151-205 98-143 (177)
119 3ma5_A Tetratricopeptide repea 52.9 51 0.0017 22.4 9.6 72 151-237 24-95 (100)
120 3bee_A Putative YFRE protein; 52.7 22 0.00074 25.0 4.8 28 7-34 44-71 (93)
121 1qqe_A Vesicular transport pro 52.1 98 0.0033 25.4 13.8 52 150-205 134-186 (292)
122 1kt0_A FKBP51, 51 kDa FK506-bi 52.0 25 0.00087 31.7 6.3 53 151-205 285-345 (457)
123 2fbn_A 70 kDa peptidylprolyl i 51.9 42 0.0014 25.6 6.8 46 151-205 105-150 (198)
124 1na0_A Designed protein CTPR3; 51.6 50 0.0017 21.9 6.8 46 151-205 60-105 (125)
125 1p5q_A FKBP52, FK506-binding p 51.5 14 0.00049 31.8 4.4 54 151-205 164-224 (336)
126 1hh8_A P67PHOX, NCF-2, neutrop 51.2 43 0.0015 25.4 6.8 46 151-205 54-99 (213)
127 3urz_A Uncharacterized protein 50.8 43 0.0015 26.1 6.8 29 6-34 4-32 (208)
128 2lni_A Stress-induced-phosphop 50.0 24 0.00083 24.2 4.7 46 151-205 33-78 (133)
129 2kat_A Uncharacterized protein 49.9 59 0.002 22.2 9.0 50 150-208 35-84 (115)
130 3cv0_A Peroxisome targeting si 48.7 1E+02 0.0035 24.6 17.7 29 6-34 55-83 (327)
131 3gyz_A Chaperone protein IPGC; 47.5 55 0.0019 24.7 6.8 46 151-205 53-98 (151)
132 3as5_A MAMA; tetratricopeptide 47.4 60 0.002 23.3 6.8 47 151-206 93-139 (186)
133 1wao_1 Serine/threonine protei 47.1 40 0.0014 30.7 6.8 15 190-204 87-101 (477)
134 2v5f_A Prolyl 4-hydroxylase su 46.8 70 0.0024 22.2 7.3 53 151-205 22-74 (104)
135 3gw4_A Uncharacterized protein 45.2 91 0.0031 23.1 15.9 57 150-209 123-179 (203)
136 1hxi_A PEX5, peroxisome target 44.7 29 0.00098 24.8 4.5 47 150-205 67-113 (121)
137 4gfq_A Ribosome-recycling fact 44.5 48 0.0017 27.7 6.3 69 40-113 127-199 (209)
138 2c2l_A CHIP, carboxy terminus 44.1 38 0.0013 28.1 5.8 49 156-208 53-103 (281)
139 2ooe_A Cleavage stimulation fa 43.5 29 0.001 31.4 5.3 53 150-211 62-114 (530)
140 1ya0_A SMG-7 transcript varian 43.4 78 0.0027 29.6 8.3 65 130-209 158-235 (497)
141 2vgx_A Chaperone SYCD; alterna 43.3 73 0.0025 23.4 6.8 46 151-205 38-83 (148)
142 1hh8_A P67PHOX, NCF-2, neutrop 43.2 45 0.0015 25.3 5.7 55 150-205 87-149 (213)
143 1zu2_A Mitochondrial import re 42.4 38 0.0013 26.8 5.2 94 130-237 42-142 (158)
144 1w3b_A UDP-N-acetylglucosamine 42.2 1.5E+02 0.0052 24.8 14.6 28 7-34 68-95 (388)
145 1hxi_A PEX5, peroxisome target 42.0 87 0.003 22.1 6.8 47 150-205 33-79 (121)
146 2kat_A Uncharacterized protein 41.4 82 0.0028 21.4 12.0 60 6-70 19-78 (115)
147 2ho1_A Type 4 fimbrial biogene 40.8 1.2E+02 0.0042 23.3 16.4 62 6-72 71-132 (252)
148 2yhc_A BAMD, UPF0169 lipoprote 40.8 94 0.0032 24.3 7.4 49 151-205 21-69 (225)
149 2ond_A Cleavage stimulation fa 40.7 61 0.0021 26.9 6.5 46 151-205 186-231 (308)
150 2fo7_A Synthetic consensus TPR 40.6 79 0.0027 21.0 6.3 46 151-205 52-97 (136)
151 3sz7_A HSC70 cochaperone (SGT) 40.4 1E+02 0.0036 22.4 10.6 26 9-34 14-39 (164)
152 4ga2_A E3 SUMO-protein ligase 40.1 61 0.0021 23.9 5.9 26 9-34 34-59 (150)
153 1ge9_A Ribosome recycling fact 40.0 87 0.003 25.5 7.1 71 39-113 104-174 (184)
154 3qky_A Outer membrane assembly 39.0 1.4E+02 0.0048 23.5 12.2 64 10-74 152-224 (261)
155 2e2e_A Formate-dependent nitri 38.7 80 0.0027 23.2 6.4 48 150-205 60-109 (177)
156 1dd5_A Ribosome recycling fact 38.4 77 0.0026 25.8 6.5 69 39-112 102-174 (185)
157 3q49_B STIP1 homology and U bo 38.3 96 0.0033 21.4 9.4 10 153-162 62-71 (137)
158 2wh5_A Acyl-COA-binding domain 38.2 57 0.002 24.1 5.2 48 20-69 10-73 (106)
159 1wqg_A Ribosome recycling fact 38.0 1.4E+02 0.0049 24.2 8.1 31 39-69 102-132 (185)
160 4i17_A Hypothetical protein; T 37.4 73 0.0025 24.6 6.2 47 150-205 58-104 (228)
161 1ise_A Ribosome recycling fact 36.6 81 0.0028 25.7 6.3 69 39-112 102-174 (185)
162 2ond_A Cleavage stimulation fa 36.2 1.8E+02 0.0061 23.8 17.2 51 150-205 219-269 (308)
163 1is1_A Ribosome recycling fact 35.9 86 0.0029 25.5 6.4 69 39-112 102-174 (185)
164 3rkv_A Putative peptidylprolyl 34.0 1.3E+02 0.0046 21.7 11.8 70 151-237 80-149 (162)
165 1p5q_A FKBP52, FK506-binding p 33.9 94 0.0032 26.4 6.8 46 151-205 213-258 (336)
166 1eh1_A Ribosome recycling fact 33.0 81 0.0028 25.7 5.8 74 39-113 103-176 (185)
167 4gyw_A UDP-N-acetylglucosamine 32.6 83 0.0028 30.7 6.8 47 150-205 93-139 (723)
168 3u64_A Protein TP_0956; tetrat 32.3 43 0.0015 29.5 4.2 48 150-205 220-268 (301)
169 2r5s_A Uncharacterized protein 32.2 1.5E+02 0.005 22.0 7.0 29 6-34 108-136 (176)
170 3ma5_A Tetratricopeptide repea 31.9 1.2E+02 0.004 20.4 10.4 59 6-69 7-65 (100)
171 2g0u_A Type III secretion syst 31.7 24 0.00082 25.8 2.1 59 122-187 6-68 (92)
172 2fo7_A Synthetic consensus TPR 31.6 1.1E+02 0.0039 20.2 6.3 26 9-34 4-29 (136)
173 3ub0_A Non-structural protein 30.7 32 0.0011 28.3 2.9 38 150-207 19-56 (199)
174 2yhc_A BAMD, UPF0169 lipoprote 28.2 2.1E+02 0.0071 22.1 19.3 65 7-73 5-69 (225)
175 2wb7_A PT26-6P; extra chromoso 27.7 2E+02 0.0069 27.2 8.1 52 138-191 436-488 (526)
176 2h6f_A Protein farnesyltransfe 27.3 3.1E+02 0.011 23.9 14.0 58 7-69 98-156 (382)
177 2if4_A ATFKBP42; FKBP-like, al 26.5 87 0.003 26.7 5.2 49 151-205 196-258 (338)
178 2kck_A TPR repeat; tetratricop 26.4 1.3E+02 0.0045 19.3 7.7 26 9-34 9-34 (112)
179 2xcb_A PCRH, regulatory protei 26.2 1.8E+02 0.006 20.6 11.1 27 8-34 20-46 (142)
180 4h7y_A Dual specificity protei 25.3 69 0.0024 25.6 3.9 75 116-204 9-87 (161)
181 2l6j_A TPR repeat-containing p 25.3 1.5E+02 0.005 19.4 5.7 29 6-34 4-32 (111)
182 2c2l_A CHIP, carboxy terminus 25.2 93 0.0032 25.6 5.1 28 7-34 5-32 (281)
183 2vq2_A PILW, putative fimbrial 25.2 2.1E+02 0.0071 21.1 15.9 164 7-204 43-209 (225)
184 1xi4_A Clathrin heavy chain; a 24.9 6.9E+02 0.024 27.1 13.9 24 181-204 1284-1307(1630)
185 3qou_A Protein YBBN; thioredox 24.3 2.8E+02 0.0096 22.5 8.0 29 6-34 219-247 (287)
186 3mkr_A Coatomer subunit epsilo 23.5 1.9E+02 0.0067 23.8 6.8 46 151-205 183-228 (291)
187 4fhn_B Nucleoporin NUP120; pro 22.9 1.5E+02 0.0051 30.3 6.9 60 10-71 903-964 (1139)
188 2vsy_A XCC0866; transferase, g 22.2 1.8E+02 0.0062 26.3 6.8 46 151-205 74-119 (568)
189 2vsy_A XCC0866; transferase, g 22.0 4.3E+02 0.015 23.7 15.4 28 7-34 24-51 (568)
190 2kc7_A BFR218_protein; tetratr 21.3 1.7E+02 0.0059 18.8 5.9 26 9-34 3-28 (99)
191 1w3b_A UDP-N-acetylglucosamine 21.1 3.5E+02 0.012 22.3 16.1 24 11-34 38-61 (388)
192 1ihg_A Cyclophilin 40; ppiase 20.9 1.5E+02 0.0052 25.8 5.8 46 151-205 290-335 (370)
193 1kt0_A FKBP51, 51 kDa FK506-bi 20.9 3.5E+02 0.012 23.9 8.4 45 151-204 334-378 (457)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=4.2e-97 Score=649.12 Aligned_cols=239 Identities=59% Similarity=0.929 Sum_probs=223.8
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchh
Q 025992 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (245)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~ 82 (245)
|.+|++++|+|||++||||||||+.+||++++ ++ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~--~~-~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~ 77 (248)
T 3uzd_A 1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTE--LN-EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK 77 (248)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence 34799999999999999999999999999998 76 9999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--chHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025992 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (245)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (245)
+++.+++||++|++||..+|++|+++||++|||.++++ +++|||+|||||||||+|||..|++|+++++.|+++|++|
T Consensus 78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A 157 (248)
T 3uzd_A 78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA 157 (248)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhccC
Q 025992 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 240 (245)
Q Consensus 161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~e~ 240 (245)
+++|+.+||||||+|||||||||||||||+|+|++||.+||+|||+|++++|+++|++|+|+|+||||||||||+|+++.
T Consensus 158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~ 237 (248)
T 3uzd_A 158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQ 237 (248)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CccC
Q 025992 241 QIDE 244 (245)
Q Consensus 241 ~~~~ 244 (245)
++++
T Consensus 238 ~~~~ 241 (248)
T 3uzd_A 238 QDDD 241 (248)
T ss_dssp ----
T ss_pred cccc
Confidence 7654
No 2
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.9e-96 Score=641.40 Aligned_cols=234 Identities=61% Similarity=0.935 Sum_probs=228.2
Q ss_pred CCCCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccc
Q 025992 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN 80 (245)
Q Consensus 1 ~~~~~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~ 80 (245)
|.+.+|++++|+|||||||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|++++|+++.+|+
T Consensus 3 ~~~~~re~~v~~AklaeqaeRyddM~~~mk~v~~--~~-~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~ 79 (236)
T 3iqu_A 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVE--KG-EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGS 79 (236)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred cccccHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCC
Confidence 3334799999999999999999999999999999 76 99999999999999999999999999999999999988888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025992 81 EEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (245)
Q Consensus 81 ~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (245)
+.+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A 159 (236)
T 3iqu_A 80 EEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEA 159 (236)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhh
Q 025992 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 237 (245)
Q Consensus 161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~ 237 (245)
+++|+.+||||||+|||||||||||||||+|+|++||++||+|||+|++++|+++||+|+|+|+||||||||||+|+
T Consensus 160 ~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 160 MDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=5.7e-96 Score=644.44 Aligned_cols=234 Identities=70% Similarity=1.077 Sum_probs=227.1
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchh
Q 025992 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (245)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~ 82 (245)
|.+|++++|+|||+|||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|++++||++.+|++.
T Consensus 28 m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~--~~-~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 28 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 34799999999999999999999999999998 76 9999999999999999999999999999999999999889989
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025992 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (245)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (245)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhcc
Q 025992 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 239 (245)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~e 239 (245)
+|+.+||||||+|||||||||||||||+|+|++||.|||+|||+||+++|+|+||+|+|+|+||||||||||+|+++
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=5.9e-94 Score=626.56 Aligned_cols=233 Identities=70% Similarity=1.075 Sum_probs=226.4
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchh
Q 025992 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (245)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~ 82 (245)
|.+|++++|+|||++|||||+||+++||++++ .+ ++||.||||||||||||+||++|+|||+|++++|+++++|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~--~~-~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhc--cc-CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 34799999999999999999999999999998 76 9999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025992 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (245)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (245)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhc
Q 025992 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 238 (245)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~ 238 (245)
+|+.+||||||+||||+||||||||||+|+|++||.+||+|||+|++++|+++||+|+|+|+|||||||||++|++
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 9998999999999999999999999999999999999999999999999999999999999999999999999985
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=7.6e-94 Score=633.26 Aligned_cols=238 Identities=77% Similarity=1.151 Sum_probs=222.4
Q ss_pred CcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCC-CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchh
Q 025992 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTP-ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (245)
Q Consensus 4 ~~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~-~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~ 82 (245)
++|++++|+|||++|||||+||+.+||++++ ++ +++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~--~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~ 83 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSN--SLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 83 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHc--cCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH
Confidence 4699999999999999999999999999998 52 17999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025992 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (245)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (245)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|+.+++.|+++|++|++
T Consensus 84 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 163 (260)
T 1o9d_A 84 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 163 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhccCCc
Q 025992 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQI 242 (245)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~e~~~ 242 (245)
+|+.+||||||+||||+||||||||||+|+|++||.|||+|||+|++++|+|+|++|+|+|+|||||||||++|+++.++
T Consensus 164 iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~ 243 (260)
T 1o9d_A 164 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243 (260)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC----
T ss_pred HHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999987655
Q ss_pred c
Q 025992 243 D 243 (245)
Q Consensus 243 ~ 243 (245)
+
T Consensus 244 ~ 244 (260)
T 1o9d_A 244 D 244 (260)
T ss_dssp -
T ss_pred c
Confidence 4
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=1.4e-92 Score=624.70 Aligned_cols=232 Identities=64% Similarity=1.009 Sum_probs=224.7
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCC--CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchh
Q 025992 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTP--ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (245)
Q Consensus 5 ~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~--~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~ 82 (245)
+|++++|+|||++|||||+||+++||++++ .+ +++||.||||||||||||+||++|+|||+|++++|+++++|++.
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~--~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVE--ARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--SCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 599999999999999999999999999998 52 17999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025992 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (245)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (245)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhcc
Q 025992 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 239 (245)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~e 239 (245)
+| .+||||||+|||||||||||||||+|+|++||+|||+|||+|++++|+|+||+|+|+++|||||||||++|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=1.1e-89 Score=605.94 Aligned_cols=227 Identities=23% Similarity=0.421 Sum_probs=196.5
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhh-hcccc-hh
Q 025992 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EGRKN-EE 82 (245)
Q Consensus 5 ~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~-~~~~~-~~ 82 (245)
+|++++|+|||++||||||||+++| ++ ++ ++||.||||||||||||+||++|+|||+|++++||+ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e--~~-~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TE--SS-DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hh--cC-CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 5999999999999999999999999 66 65 999999999999999999999999999999999999 78887 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025992 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (245)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (245)
+++.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|+++++.|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhcC--CCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH---HHHhhcccCCCchHHHHHHHHHHHhhHhhhh
Q 025992 163 IALTDL--APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE---AIAELDTLGEESYKDSTLIMQLLRDNLTLWT 237 (245)
Q Consensus 163 ~a~~~L--~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~---a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~ 237 (245)
+|+++| |||||+|||||||||||||||+|+|++||.+||+|||+ ||+++|+++|++ |+||||||||||+|+
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWt 256 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWE 256 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhh
Confidence 999899 99999999999999999999999999999999999999 999999999987 999999999999999
Q ss_pred ccCCc
Q 025992 238 SDMQI 242 (245)
Q Consensus 238 ~e~~~ 242 (245)
++.++
T Consensus 257 sd~~~ 261 (268)
T 3efz_A 257 QGCSG 261 (268)
T ss_dssp TTCCT
T ss_pred ccccc
Confidence 98764
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=3.1e-81 Score=541.47 Aligned_cols=217 Identities=21% Similarity=0.274 Sum_probs=197.5
Q ss_pred cHHhHH---HHHHHHHHhcCHHHHHHHHHHHhhc-c-CCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhccc
Q 025992 5 TREQYV---YLAKLAEQAERYEEMVKFMDSLVTS-S-TPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRK 79 (245)
Q Consensus 5 ~re~~~---~~Aklaeq~ery~Dm~~~mk~i~~~-~-~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~ 79 (245)
+|++++ |+|||++||||||||+++||++++. . .+ ++||.||||||||||||+||++|+|||+|++++|++ +|
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~-~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~ 78 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFEN-SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LN 78 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CS
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cC
Confidence 588999 9999999999999999999999971 0 13 899999999999999999999999999999999998 67
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHH
Q 025992 80 NEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKA 159 (245)
Q Consensus 80 ~~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 159 (245)
++.+++.+++||++|++||..+|++|+++||++|+|++ |++|||+|||||||||+|||..|+ ++.|+++|++
T Consensus 79 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~ 150 (227)
T 2o8p_A 79 NDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQD 150 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHH
Confidence 78899999999999999999999999999999999997 999999999999999999999998 8999999999
Q ss_pred HHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH---HHhhcccCCCchHHHHHHHHHHHhhHh
Q 025992 160 AQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA---IAELDTLGEESYKDSTLIMQLLRDNLT 234 (245)
Q Consensus 160 A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a---~~~ld~l~ee~~~ds~~ilqlLrdNl~ 234 (245)
|+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-+++ +.+.++|+|+|+|||||.
T Consensus 151 A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m--~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 151 AFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENM--DRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHC----
T ss_pred HHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccc--hhHHHHHHHHHHHHHhcc
Confidence 999999899999999999999999999999999999999999999976 3332222 358889999999999984
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.62 E-value=0.68 Score=37.17 Aligned_cols=59 Identities=25% Similarity=0.284 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
.+.|...|++|+.+++...++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 357899999999999888888899888888888877776 69999999999999876543
No 10
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.75 E-value=0.4 Score=45.17 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 025992 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (245)
Q Consensus 96 ~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~r 175 (245)
+|-..+|...+.+-...|=|...+ .+=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~---~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLY---VLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHH---HHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 455677788888777666544311 11111222333322211 25689999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 176 LGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 176 LgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
+....|.++.|+. .|+.++|..+.++|++--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999998887 69999999999998875544
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.68 E-value=1.1 Score=34.32 Aligned_cols=163 Identities=13% Similarity=0.145 Sum_probs=84.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~ 86 (245)
.-+..++.+..+-|+|++++.+.+++++ .+ |. +.+=...+..+|-. .+....+...+............ .....
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~~~-~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLK--AD-PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTSAE-AYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCCHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchhHH-HHHHH
Confidence 4556789999999999999999999998 43 44 44555556666544 34444555555433222211100 00000
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 025992 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (245)
Q Consensus 87 i~~yr~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (245)
...+.. .=-++-...+..++. +-|.. ..+ +...|..|.-+ |+ -+.|.+.|++|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~-----~~~~~----~~~--~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIA-----LNTVY----ADA--YYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-----HCTTC----HHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHH-----hCccc----hHH--HHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 000000 000112222222222 12321 112 22334443221 11 35688999998864
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 166 ~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 ---~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 34544 34455555555 48999999988777764
No 12
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.63 E-value=1.7 Score=36.44 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
-+.|...|++|++.++ .++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 171 ~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 3669999999999886 4666777777788999988887 79999999999999886643
No 13
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=93.63 E-value=0.87 Score=42.13 Aligned_cols=114 Identities=15% Similarity=0.077 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 025992 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (245)
Q Consensus 96 ~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~r 175 (245)
+|...+|...+.+-.+.|=|...+ .+=-+.--|.-|+.. |. -+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g~-----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----QD-----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----cC-----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 456677788888777766554311 111111122222211 10 25689999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHH
Q 025992 176 LGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQ 227 (245)
Q Consensus 176 LgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilq 227 (245)
.....|.++-|+. .|+.++|..+-++|++=-... +..+ .+++..+.+
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~---lG~~-Hp~~~~l~~ 428 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA---HGKD-HPYISEIKQ 428 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTT-CHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH---cCCC-ChHHHHHHH
Confidence 9999999888776 799999999999888765553 3443 344444433
No 14
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=93.62 E-value=2.5 Score=34.47 Aligned_cols=187 Identities=18% Similarity=0.170 Sum_probs=101.2
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcc--C---CCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhh-hhc--c
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSS--T---PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQK-EEG--R 78 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~--~---~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k-~~~--~ 78 (245)
+-+..++.+....|+|++++.+++++++.. . . .+....-...+..+|-. .+....|...+...... ... .
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHD-HPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSS-SHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 456678888989999999999999988621 0 1 22222333344444322 23334444444321111 000 0
Q ss_pred cchh----hHHHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHH
Q 025992 79 KNEE----HVSLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENT 153 (245)
Q Consensus 79 ~~~~----~~~~i~~yr-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a 153 (245)
.... ...+..-|. ..=-++-...+...+.+.....-+. ....+..+-..|..|... ++ .+.|
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A 172 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEV 172 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHH
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHH
Confidence 0000 001111110 0001223334444444443322111 112222333344444222 11 3678
Q ss_pred HHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 154 MLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 154 ~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
...|++|+.++....++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 173 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 173 EYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999888888889888888888877776 79999999999999876543
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.40 E-value=0.4 Score=44.18 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999998877 79999999999988875544
No 16
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.75 E-value=3.2 Score=33.35 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.|...|++|+++....-.+.++.......+.+.+| ...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYY-TINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 37889999999885433322222223444445444 458999999998777764
No 17
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.43 E-value=2.1 Score=34.15 Aligned_cols=57 Identities=18% Similarity=0.088 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
+.|...|++|+.+.+...+|.+|.......|.+..++. +|+.++|+...+++++...
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 56899999999999888888899988888888887776 7999999999999988743
No 18
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=92.41 E-value=4.2 Score=33.93 Aligned_cols=73 Identities=10% Similarity=0.066 Sum_probs=49.1
Q ss_pred HhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHH
Q 025992 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ 202 (245)
Q Consensus 123 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~ 202 (245)
.+..+...|..|...-+ -+.|...|++|+++++. .+........+..|.+..|+. +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~k 221 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34344456666644322 35689999999999863 332222233566777777665 7999999999999
Q ss_pred HHHHH
Q 025992 203 AFEEA 207 (245)
Q Consensus 203 afd~a 207 (245)
|++-+
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 19
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.38 E-value=0.76 Score=42.52 Aligned_cols=59 Identities=7% Similarity=-0.013 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAE 210 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ 210 (245)
+.|...|++|+++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--...
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999988888877776 799999999999998765543
No 20
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.70 E-value=0.95 Score=42.53 Aligned_cols=59 Identities=15% Similarity=0.042 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAE 210 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ 210 (245)
+.|...|++|+++.+..|.|.||..+...-|.+..|.. +|+.++|..+.++|++--...
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 35777899999999999999999999999999888876 799999999999998765543
No 21
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=91.35 E-value=7.1 Score=34.30 Aligned_cols=49 Identities=14% Similarity=0.106 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (245)
+.|.++|++|+++ .|.++..-.+.+++..|++..+|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5689999999853 344455556678888888878999999988766654
No 22
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=91.32 E-value=6.7 Score=34.88 Aligned_cols=49 Identities=8% Similarity=0.100 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
.+.|...|++|+++ .|.+| ....+.+..|+ .+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46688888888764 45554 34455555555 4799999999888877654
No 23
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=90.72 E-value=2.2 Score=36.98 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=47.9
Q ss_pred hHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHH
Q 025992 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (245)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak 201 (245)
...+|+-.+|.+|...-. -+.|...|++|+.+++. . |.+|..-....+.+..|+. +|+.++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-KDRIEKAEFFFKMSESYYY-MKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-CCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 344566667777643322 35689999999988753 3 2333333344455555554 899999999998
Q ss_pred HHHHHHH
Q 025992 202 QAFEEAI 208 (245)
Q Consensus 202 ~afd~a~ 208 (245)
+|++-.-
T Consensus 168 ~al~~~~ 174 (383)
T 3ulq_A 168 QAYEIYK 174 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887543
No 24
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.44 E-value=6.4 Score=32.21 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (245)
.+.|...|++|+++. |.+| ....+.+..++ .+|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 356888999998753 3443 23344555544 4799999998777654
No 25
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=89.90 E-value=1.5 Score=38.17 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=50.1
Q ss_pred hHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHH
Q 025992 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (245)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak 201 (245)
...+|+-.+|.++...-. -+.|...|++|+.++.. + +.+|..-....|.+.+|+. +|+.++|+...+
T Consensus 99 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~ 165 (378)
T 3q15_A 99 LKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-V-SDDIEKAEFHFKVAEAYYH-MKQTHVSMYHIL 165 (378)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-C-CChHHHHHHHHHHHHHHHH-cCCcHHHHHHHH
Confidence 445566677777644322 35689999999998853 3 2334444555566666665 799999999999
Q ss_pred HHHHHHH
Q 025992 202 QAFEEAI 208 (245)
Q Consensus 202 ~afd~a~ 208 (245)
+|++-.-
T Consensus 166 ~al~~~~ 172 (378)
T 3q15_A 166 QALDIYQ 172 (378)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887554
No 26
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.20 E-value=1.2 Score=40.99 Aligned_cols=58 Identities=14% Similarity=-0.012 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
+.|...|++++++.+..|+|.||..+...-|.+.-|.. +|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45677778887777778999999999999998877765 79999999999998875544
No 27
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=88.41 E-value=8.8 Score=31.02 Aligned_cols=184 Identities=14% Similarity=0.123 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcc--C--CCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhh-hc--ccc
Q 025992 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSS--T--PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EG--RKN 80 (245)
Q Consensus 8 ~~~~~Aklaeq~ery~Dm~~~mk~i~~~~--~--~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~-~~--~~~ 80 (245)
-+..++.+....|+|++++.++++.+... . +..+....-...++.+|-. .+....|...+....+.. .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34578888888999999999999988631 0 1112223333344444422 344445555554322211 00 000
Q ss_pred hhhH----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHH
Q 025992 81 EEHV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (245)
Q Consensus 81 ~~~~----~~i~~yr-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (245)
.... .+..-|. ..=-++-.......+.+.....-+. ....+..+...|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 0000 0001010 0001233444455555544332221 11222223334444432211 356788
Q ss_pred HHHHHHHHHhh-----------------------------------------cCCCCCcchHHHhhhHHHHHHHHhCCHH
Q 025992 156 SYKAAQDIALT-----------------------------------------DLAPTHPIRLGLALNFSVFYYEILNSSE 194 (245)
Q Consensus 156 aY~~A~~~a~~-----------------------------------------~L~pt~p~rLgL~LN~SVF~yei~~~~~ 194 (245)
.|++|++++.. .....+|.......+.+..|.. +|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 88888876532 1122456666666666666655 79999
Q ss_pred HHHHHHHHHHHH
Q 025992 195 KACTMAKQAFEE 206 (245)
Q Consensus 195 ~A~~iak~afd~ 206 (245)
+|+...++|++-
T Consensus 296 ~A~~~~~~al~l 307 (311)
T 3nf1_A 296 AAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887754
No 28
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=88.40 E-value=1.4 Score=32.50 Aligned_cols=48 Identities=19% Similarity=0.328 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-.
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 6699999999875 45554 345677777776 799999999998887643
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=88.29 E-value=10 Score=31.70 Aligned_cols=59 Identities=17% Similarity=0.217 Sum_probs=33.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
.-+..++.+....|+|++++.+++++++ .. |. +.+=...+..+|-. .+....|...+..
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLE--LK-PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 3455677777777888888887777776 32 33 34444455555443 3444444444443
No 30
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=88.28 E-value=8 Score=30.41 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=41.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
+.+..++.+.-+.|+|++++.++.++++ .. |.-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~-~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLK--LT-NNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HT-TTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHh--cc-CCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 6778889999999999999999999998 43 42444444445555543 4555566666543
No 31
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.63 E-value=13 Score=32.02 Aligned_cols=54 Identities=7% Similarity=0.142 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
-+.|...|++|+++++..- +|.......|.+..++ .+|+.++|+...++|+.-+
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLC-KAGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHH
Confidence 4678999999999987543 3444444555565555 4899999999888776643
No 32
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=87.45 E-value=9.5 Score=30.33 Aligned_cols=59 Identities=12% Similarity=0.130 Sum_probs=36.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
+-+..++.+..+.|+|++++..+.+++. .+ |. +.+=...+..+|-. .+....+...+..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 64 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK--EN-PQ-DPEALYWLARTQLK-LGLVNPALENGKT 64 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--TS-SS-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4566777788888888888888888876 42 33 44445555555533 3444555555543
No 33
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=87.10 E-value=14 Score=31.92 Aligned_cols=47 Identities=13% Similarity=0.078 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++|+.+ .|.+| ....+.+..+. .+|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 35578888888764 34444 33444555444 57999999998888764
No 34
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=86.91 E-value=18 Score=32.86 Aligned_cols=173 Identities=17% Similarity=0.154 Sum_probs=87.8
Q ss_pred HhHHHHHHHHHHhcCH-HHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHH
Q 025992 7 EQYVYLAKLAEQAERY-EEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (245)
Q Consensus 7 e~~~~~Aklaeq~ery-~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~ 85 (245)
+-+..++++....|+| ++++.++++.++ .+ |. ..+=...+..+|-.. +....|...+....+.... . .....
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~--~~-p~-~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~-~-~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVK--LE-PE-LVEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN-K-VSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC-H-HHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHh--hC-CC-CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC-H-HHHHH
Confidence 4455667777777777 777777777776 32 33 344555555555432 4444444444332221111 0 11111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHH
Q 025992 86 LVKDYRS----------KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (245)
Q Consensus 86 ~i~~yr~----------ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (245)
+..-|.. .=-++-...++..+.+ -|.. ..++ -..|..|.... |..+. ...-.+.|..
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~~--~~lg~~~~~~~-~~~~~-~~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRSW--YILGNAYLSLY-FNTGQ-NPKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHHH--HHHHHHHHHHH-HHTTC-CHHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHHH--HHHHHHHHHHH-Hhhcc-ccchHHHHHH
Confidence 1111111 1112334444455443 2321 2222 23444443320 11122 1123577899
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 156 aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99999876 33222555667777777776 7999999988777664
No 35
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=86.31 E-value=15 Score=31.40 Aligned_cols=191 Identities=16% Similarity=0.076 Sum_probs=96.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcH---HHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchh-
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTV---EERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE- 82 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~---eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~- 82 (245)
..+..++....+.|+|++++.+++++++ .. +.-.. .=...+..+|-. .+....+...+....+.-...++..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQ--AG-TEDLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHH--hc-ccChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCchH
Confidence 4556788888899999999999999997 43 43211 123344444432 3444555554433221110001100
Q ss_pred hH----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhc------c-cchhHHHHH
Q 025992 83 HV----SLVKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEF------K-VGDERKAAA 150 (245)
Q Consensus 83 ~~----~~i~~y-r~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~------~-~~~~~~~~~ 150 (245)
.. .+..-| ...=-++-...+..++.+.... .+....+..+...|..|...-.. . ...+-....
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHH
Confidence 00 000000 0001123344445555544332 11122233333445555443330 0 011223346
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
+.|...|++|++++... +.+|.......+.+..++ .+|+.++|+...++|+.-.-.
T Consensus 200 ~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Confidence 78899999999888643 233444444455555544 489999999998888775543
No 36
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=85.01 E-value=16 Score=30.70 Aligned_cols=56 Identities=16% Similarity=0.026 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
.+.|...|++|++++... +.++.......|.+..+ ..+|+.++|+...++|++-+-
T Consensus 203 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAY-IFLGEFETASEYYKKTLLLAR 258 (406)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHHH
Confidence 356888889998888642 22222222334444444 457999999888888776543
No 37
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=84.92 E-value=16 Score=30.67 Aligned_cols=191 Identities=14% Similarity=0.038 Sum_probs=96.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCc---HHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhh
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELT---VEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~---~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~ 83 (245)
..+..++...-..|+|++++.++.++++ .. +.-. ..=...++.+|-. .+....+...+.....-....++...
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 85 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLG 85 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-cccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHH
Confidence 4556788888899999999999999997 43 4321 1223344444432 33444444444321111100111100
Q ss_pred -H----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhh-------cc---cchhHH
Q 025992 84 -V----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE-------FK---VGDERK 147 (245)
Q Consensus 84 -~----~~i~~yr-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~---~~~~~~ 147 (245)
. ....-|. ..=-++-...+...+.+.... .+....+..+...|..|...-. .. ..++..
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~ 160 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVR 160 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHH
Confidence 0 0001110 001123344445555544332 1112222233334444433332 00 012334
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 148 AAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 148 ~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
...+.|...|++|+.++.. . +.+|.......|.+..++ .+|+.++|+...++|+.-+-.
T Consensus 161 ~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 161 DALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHh
Confidence 4577899999999998864 2 333444445555555555 479999999999888776443
No 38
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=84.67 E-value=20 Score=31.38 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----cchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDL--APTH----PIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--~pt~----p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4667888888887443333 4444 5555566666666665 7999999998888765
No 39
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=84.62 E-value=19 Score=31.10 Aligned_cols=168 Identities=13% Similarity=0.099 Sum_probs=84.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHHHHH
Q 025992 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (245)
Q Consensus 10 ~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~i~~ 89 (245)
..+|.+..+.|+|++++..+.++++ .. | -+..-...+..+|-. .+....+...+........... .....+..-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~--~~-~-~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILE--VC-V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDNT-EAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH--HC-T-TCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSCH-HHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH--hC-C-CChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHH
Confidence 3457778889999999999999987 42 3 345555666666543 3555566666654333221110 011111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhh--------ccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025992 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKM--------KGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (245)
Q Consensus 90 yr~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (245)
|.. .=-++-......++.+ -|.. ......+..+ .|+.|. ..| -.+.|...|+++
T Consensus 221 ~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~g-----~~~~A~~~~~~~ 283 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESV 283 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHHH-----HHT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCh--HHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHH
Confidence 111 0011222233333321 2321 1111111000 022211 011 145688888888
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+. +.|.+|....-++..-.-.|.-+|+.++|+...++++.
T Consensus 284 l~-----~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MK-----TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HH-----HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hh-----cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 76 34667765444444444445568999999999888764
No 40
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=84.25 E-value=19 Score=30.84 Aligned_cols=175 Identities=11% Similarity=0.041 Sum_probs=88.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCc-----HHHHHHHHHHHhhhhhhhhHHHHHHHH-Hhhhhhcccc-hhh
Q 025992 11 YLAKLAEQAERYEEMVKFMDSLVTSSTPATELT-----VEERNLLSVAYKNVIGSLRAAWRIISS-IEQKEEGRKN-EEH 83 (245)
Q Consensus 11 ~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~-----~eERnLls~ayKn~i~~~R~s~R~l~~-ie~k~~~~~~-~~~ 83 (245)
+++.+....|+|++++.+.++.+... .... .+=...++.+|-. .+..-.|...+.. ++-... .++ ...
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~-~~~~~~~ 182 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKL---IFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKE-HEAYNIR 182 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTG---GGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHT-CSTTHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH---hhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHh-CccchHH
Confidence 37888888999999999999998631 1221 2223344444433 3333344433322 111111 111 000
Q ss_pred HH-----HHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHH
Q 025992 84 VS-----LVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 157 (245)
Q Consensus 84 ~~-----~i~~yr-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 157 (245)
.. +-.-|. ..=-++-...+...+.+.... .+.......+.-.|..|..+-. -+.|...|
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~ 247 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYF 247 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHH
Confidence 00 000000 000122333444455444322 1122222233335555533221 36699999
Q ss_pred HHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 158 KAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 158 ~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
++|+++++..-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 248 ~~al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 248 KRAIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 999999875333 13334445555655554 7999999999998887653
No 41
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=83.83 E-value=1.7 Score=32.77 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhhcC---CCC-------CcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDL---APT-------HPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L---~pt-------~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 568999999999864321 233 67777888888888776 7999999998888754
No 42
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=83.25 E-value=16 Score=29.35 Aligned_cols=56 Identities=16% Similarity=-0.040 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
.+.|...|++|++++... .+|...+.++..-...|...|+.++|+...+++++-+-
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356888899998888642 23344444444444455567999999998888876543
No 43
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=82.72 E-value=16 Score=28.77 Aligned_cols=59 Identities=12% Similarity=0.061 Sum_probs=38.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
+-+..+|.+..+.|+|++++.+++++++ .. +. +.+-...+..+|-. .+..-.|...+..
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 96 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALE--ID-PS-SADAHAALAVVFQT-EMEPKLADEEYRK 96 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHh--cC-CC-hHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 3456778888889999999999999887 42 33 34444555555543 3445555555543
No 44
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=81.92 E-value=20 Score=29.37 Aligned_cols=47 Identities=13% Similarity=0.071 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++|+++ .|.+| ....+.+..++ .+|+.++|+...++|++
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 35688888888765 34443 35555666555 48999999988777664
No 45
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=81.70 E-value=4.5 Score=29.69 Aligned_cols=46 Identities=17% Similarity=0.138 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|.++|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5688899999864 34444 455666666665 7999999988777764
No 46
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=81.39 E-value=19 Score=28.90 Aligned_cols=190 Identities=12% Similarity=0.006 Sum_probs=98.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHH----HHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchh
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~e----ERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~ 82 (245)
..+...+....+.|+|++++.++++.++ .. +. +++ =...+..+|-. .+....+...+.....-....++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--hC-cc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 5677888999999999999999999997 43 33 222 22233433332 2334444444432211110011110
Q ss_pred h-H----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcc----------cchhH
Q 025992 83 H-V----SLVKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFK----------VGDER 146 (245)
Q Consensus 83 ~-~----~~i~~y-r~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~ 146 (245)
. . ....-| ...=-++-...+...+.+.... .+....+..+...|..|...-... ...+-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 0 0 000111 0001123344445555544432 222333444455666665554411 01222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
....+.|...|++|+.++... +.+|.......+.+..+ ...|+.++|+...+++++-+-.
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTH-YLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHh
Confidence 344678889999999888642 22343334444445444 4589999999999998876543
No 47
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=81.34 E-value=30 Score=31.12 Aligned_cols=47 Identities=6% Similarity=0.065 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++++++ .|.+| ....+.+.. |...|+.++|....+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 45688888888765 25554 333334443 4458999999988877765
No 48
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=81.20 E-value=6.5 Score=32.74 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHH-hhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGL-ALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL-~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
+.|...|++|+.+. .+..++..... ..|.+++|+. +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~---~~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQ---LTGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTC---CCCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---cccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 56889999999854 22333333333 4455555554 899999999999988644
No 49
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=80.97 E-value=17 Score=28.09 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=34.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
+-+..+|.+..+.|+|++++.++++++. .. +. +..-...+..+|-. .+....+...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALE--LD-SS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--cC-Cc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 4456677788888888888888888876 32 32 33334444444432 3444455555543
No 50
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=80.64 E-value=24 Score=29.56 Aligned_cols=59 Identities=10% Similarity=0.043 Sum_probs=41.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
+.++.++....+.|+|++++.++++++. .. |. +.+=...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAIL--QD-PG-DAEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHH--hC-cC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 4578889999999999999999999997 43 43 45555666666653 3555566666544
No 51
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=79.87 E-value=9.4 Score=27.11 Aligned_cols=56 Identities=18% Similarity=0.086 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
+.|...|++|+.++... +.+|.......|.+..++. .|+.++|+...++|++-+-.
T Consensus 66 ~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 56889999999988643 2223334445555655554 89999999999998876543
No 52
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=78.84 E-value=25 Score=28.70 Aligned_cols=168 Identities=13% Similarity=0.118 Sum_probs=86.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHHHHH
Q 025992 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (245)
Q Consensus 10 ~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~i~~ 89 (245)
..+|.+....|+|++++..++++++ .. | -+.+-...++.+|-. .+....+...+........... ........-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~--~~-~-~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~~-~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILE--VC-V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDNT-EAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH--HC-T-TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCCH-HHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH--hC-C-CchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHH
Confidence 3447888999999999999999997 42 3 345555566665544 3556666666654333221111 111111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhc--------cccccchhhcccchhHHHHHHHHHHHHHHH
Q 025992 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMK--------GDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (245)
Q Consensus 90 yr~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (245)
|.. .=-++-...+..++.+ -|.. +....+|.++. |..+ +..+ -.+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~~-----~~~~--~~~~~~~~~~~~~~~~~~~a~~~-----~~~~-----~~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEEL-----IRDG-----RYTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHH-----HHTT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----Cccc--hHHHHHHHHHHHHHHHHHHHHHH-----HHcC-----CHHHHHHHHHHH
Confidence 111 0011222233333321 2321 22222222211 2221 1111 135678888888
Q ss_pred HHHHhhcCCCCCcchHH-HhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 161 QDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 161 ~~~a~~~L~pt~p~rLg-L~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
++. .|.+|.... +..+.+..++. +|+.++|+...++++..
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 764 355664433 44555655554 89999999998888763
No 53
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=78.72 E-value=19 Score=27.27 Aligned_cols=166 Identities=10% Similarity=-0.040 Sum_probs=84.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~ 86 (245)
+-+..++.+..+.|+|++++..++++++ .. |. +.+-...+..+|-. .+....+...+....+...... ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~-~~~~~l 82 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALK--SD-PK-NELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDSA-EINNNY 82 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCH-HHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH--hC-cc-chHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCCh-HHHHHH
Confidence 4456778889999999999999999987 42 33 34445555555542 3455556655544332211110 111111
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHH
Q 025992 87 VKDYRSK--VESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (245)
Q Consensus 87 i~~yr~k--i~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (245)
..-|... =-++-...+..++. .|. .+. ....+...|..|... |+ .+.|...|+++++.
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~------~~~--~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~- 142 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALA------DPT--YPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA- 142 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHT------STT--CSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHhcCcHHHHHHHHHHHHc------CcC--Ccc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111110 01122222222222 121 111 122223345444322 11 35678888888764
Q ss_pred hhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 165 LTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 165 ~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
.|.+| ....+.+..++ ..|+.++|+...++++..
T Consensus 143 ----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 ----QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp ----STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred ----CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 33443 23344454444 479999999988887663
No 54
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=78.61 E-value=33 Score=29.90 Aligned_cols=172 Identities=10% Similarity=-0.007 Sum_probs=80.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~ 86 (245)
+-+..++.+....|+|++++..++++++ .. |. +.+-...+..+|-. .+....+...+........... ......
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~-~~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKE--LD-PE-NIFPYIQLACLAYR-ENKFDDCETLFSEAKRKFPEAP-EVPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHH--TC-SS-CSHHHHHHHHHTTT-TTCHHHHHHHHHHHHHHSTTCS-HHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-hh-hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHcccCH-HHHHHH
Confidence 3455677888888888888888888887 43 44 23333334444322 3444555555544332211111 011111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 025992 87 VKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (245)
Q Consensus 87 i~~yr-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (245)
..-|. ..=-++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+.+
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 11110 011122233333443322 222111111112222333332100 012 145688888888864
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 166 ~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.|.+| ....+.+..+. ..|+.++|+...+++++
T Consensus 445 ---~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~ 477 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESAD 477 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 34444 33344555444 57999999988887765
No 55
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=78.34 E-value=30 Score=29.36 Aligned_cols=182 Identities=14% Similarity=0.025 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcc--CCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccch----
Q 025992 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSS--TPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE---- 81 (245)
Q Consensus 8 ~~~~~Aklaeq~ery~Dm~~~mk~i~~~~--~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~---- 81 (245)
-+..++.+....|+|++++.++++.++.. .+.......=...+..+|- ..+....|...+.....-....++.
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 166 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEG 166 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 35578888888999999999999887631 1101111222333343332 2334444444443221111000110
Q ss_pred -hhHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhccc
Q 025992 82 -EHVSLVKDYRSK-V-----------------ESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKV 142 (245)
Q Consensus 82 -~~~~~i~~yr~k-i-----------------~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~ 142 (245)
....+..-|... = -++-...+...+.+.... .+.......+...|..|...-.
T Consensus 167 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~--- 238 (411)
T 4a1s_A 167 RALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD--- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC---
Confidence 001111111110 0 233444555555554432 1112233333444555433221
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 143 GDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 143 ~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
.+.|...|++|+.+.... .++...+.+++.-...|-.+|+.++|+...++|++.+-
T Consensus 239 -------~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 -------FQAAIEHHQERLRIAREF---GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 345788888888887541 12333333443333444457888888888888776554
No 56
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=78.21 E-value=29 Score=29.06 Aligned_cols=60 Identities=13% Similarity=0.227 Sum_probs=40.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
-+-+..++.+..+.|+|++++.+++++++ .. |. +.+-...+..+|.. .+....|...+..
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLE--LQ-PN-NLKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 34567888999999999999999999997 43 43 34445555555543 3445555555543
No 57
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=78.18 E-value=23 Score=27.93 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=19.8
Q ss_pred HHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 176 LGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 176 LgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
....++.+..++. +|+.++|+...++++.
T Consensus 215 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 215 SETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 3445555655554 7999999987777653
No 58
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=77.64 E-value=40 Score=30.32 Aligned_cols=55 Identities=9% Similarity=0.004 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
.+.|.+.|++++++... . +.+|-....+++.-...|...|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999987643 2 3456543333443334444589999999998888763
No 59
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=77.20 E-value=5.4 Score=35.09 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhh-cCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALT-DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~-~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|.++|++|+++.+. .....||-.+...-|.+.-|+. +|+.++|...-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 6699999999999864 3445677777777788877776 7999999877666543
No 60
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=77.08 E-value=7.5 Score=28.31 Aligned_cols=52 Identities=6% Similarity=-0.017 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (245)
+.|.+.|++|+++.. ..++.++.+-....|.+..+ .-+|+.++|++.-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 568999999999875 34445444333444555554 45899999998655554
No 61
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=76.41 E-value=29 Score=28.09 Aligned_cols=56 Identities=13% Similarity=-0.093 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-cchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~-p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
.+.|...|++|+.+....-.+.+ |-......+.+..++ .+|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 35689999999998854333222 333344555666555 479999999988887653
No 62
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=76.35 E-value=24 Score=27.20 Aligned_cols=60 Identities=7% Similarity=-0.053 Sum_probs=25.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (245)
..+..+|...-+.|+|++++.+++++++ .. | -+.+-...+..+|- ..+....+...+...
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~~-~-~~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIE--EN-K-EDAIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp ------------------CCTTHHHHHT--TC-T-TCHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHH--hC-c-ccHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 3456778888889999999999999987 42 3 34555555555553 345556666666543
No 63
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=76.21 E-value=7.9 Score=26.64 Aligned_cols=53 Identities=6% Similarity=-0.007 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 568889999998874 3345555445566677776665 7999999887776665
No 64
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=75.60 E-value=9.4 Score=25.82 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (245)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5688899999865 44454 345566766665 799999988777665
No 65
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=74.89 E-value=21 Score=28.28 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=39.2
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (245)
+.++.+|...-+.|+|++++.+.+++++ .. |. +.+-...+..+|-. .+....|...+...
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~~-p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 63 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEA--KK-YN-SPYIYNRRAVCYYE-LAKYDLAQKDIETY 63 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHH--TT-CC-CSTTHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH--hC-CC-cHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 4678899999999999999999999997 43 33 23334445554432 34455555555443
No 66
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=74.50 E-value=30 Score=27.29 Aligned_cols=47 Identities=19% Similarity=0.155 Sum_probs=34.2
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhh
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKN 56 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn 56 (245)
-+-+..++.+..+.|+|++++..++++++ .+ |. +.+=...+..+|..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~--~~-P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA--RT-PR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-cHHHHHHHHHHHHH
Confidence 34566789999999999999999999998 53 44 34445555555543
No 67
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=74.35 E-value=10 Score=28.64 Aligned_cols=55 Identities=7% Similarity=0.007 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
+.|...|++|+.+++ ..+ .+|...+.+++.-...|-.+|++++|....++|+.-+
T Consensus 83 ~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 568999999999986 333 2454445444444444445899999999999988754
No 68
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=74.29 E-value=13 Score=24.16 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688899998864 34443 344566666554 7999999988777765
No 69
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=73.76 E-value=11 Score=32.05 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....++++-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 56888999999988765555566666666667777666 69999999888887754
No 70
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=73.60 E-value=11 Score=26.47 Aligned_cols=47 Identities=15% Similarity=0.261 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|...|++|+++ .|.+ ..+..|++..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5688899988864 3454 3456677776665 79999999988888764
No 71
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.45 E-value=13 Score=30.85 Aligned_cols=189 Identities=15% Similarity=0.085 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHH-----hhhhhhhhHHHHHHHH-Hhhhhhcccch
Q 025992 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAY-----KNVIGSLRAAWRIISS-IEQKEEGRKNE 81 (245)
Q Consensus 8 ~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ay-----Kn~i~~~R~s~R~l~~-ie~k~~~~~~~ 81 (245)
.+...+...-..|+|+++++.+++.++ .. +. ..+....+..-+ -...+..-.|...+.. ++.........
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 152 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELK--KE-EY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY 152 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH--TC-CC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhc--cc-cC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchH
Confidence 445666677778999999999999887 32 33 333222111111 1111233344444432 21111111000
Q ss_pred hhH----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHH
Q 025992 82 EHV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLS 156 (245)
Q Consensus 82 ~~~----~~i~~yr-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 156 (245)
... ....-|. ..=-++-....+..+.+.+. .|.. ....+..+-..|..|..+-+ -+.|...
T Consensus 153 ~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~~--~~~~~~~~~nlg~~y~~~~~----------y~~Al~~ 218 (293)
T 2qfc_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHDN--EEFDVKVRYNHAKALYLDSR----------YEESLYQ 218 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCCC--HHHHHHHHHHHHHHHHHTTC----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCcc--ccchHHHHHhHHHHHHHHhh----------HHHHHHH
Confidence 000 1111111 11112344555566655543 2221 11111122234444432211 3679999
Q ss_pred HHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHH-HHHHHHHHHHHHhhcccCCCchHH
Q 025992 157 YKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKAC-TMAKQAFEEAIAELDTLGEESYKD 221 (245)
Q Consensus 157 Y~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~-~iak~afd~a~~~ld~l~ee~~~d 221 (245)
|++|++++.. ..++..++.+++.--..|.-+|+.++|+ ...++ |+.-.+.++...+++
T Consensus 219 ~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~----Al~~~~~~~~~~~~~ 277 (293)
T 2qfc_A 219 VNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK----ASFFFDILEMHAYKE 277 (293)
T ss_dssp HHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH----HHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH----HHHHHHHhCcHhhHH
Confidence 9999999853 2344455655555455556689999994 43444 444444455555533
No 72
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=73.35 E-value=16 Score=25.40 Aligned_cols=71 Identities=15% Similarity=0.134 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR 230 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLr 230 (245)
+.|...|++++. +.|.+|......++.+..++. +|+.++|+...++++... -+......+...+..++
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~------p~~~~~~~a~~~l~~l~ 123 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQY------PGSDAARVAQERLQSIR 123 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS------TTSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHH
Confidence 568888888875 356777655666666766664 799999998776665431 11222344555555555
Q ss_pred hhH
Q 025992 231 DNL 233 (245)
Q Consensus 231 dNl 233 (245)
.++
T Consensus 124 ~~~ 126 (129)
T 2xev_A 124 LGQ 126 (129)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 73
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=73.17 E-value=39 Score=28.02 Aligned_cols=58 Identities=12% Similarity=0.001 Sum_probs=39.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 69 (245)
+.+..++.+..+.|+|++++.++.++++ .. |. +.+=...+..+|.. .+....|...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQ--QD-PK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHH--SC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 4577899999999999999999999998 43 43 44555556665543 244445555444
No 74
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.61 E-value=9.8 Score=27.04 Aligned_cols=49 Identities=27% Similarity=0.214 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 446666666653 445555555566666666554 6777777777766654
No 75
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=72.53 E-value=36 Score=27.42 Aligned_cols=27 Identities=4% Similarity=-0.085 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 8 ~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
.++.+|...-+.|+|++++.++++++.
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~ 49 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQ 49 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344555555555555555555555554
No 76
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=72.29 E-value=22 Score=27.26 Aligned_cols=49 Identities=24% Similarity=0.162 Sum_probs=38.1
Q ss_pred cCHHHHHHHHHHHhh-ccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025992 20 ERYEEMVKFMDSLVT-SSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (245)
Q Consensus 20 ery~Dm~~~mk~i~~-~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 69 (245)
+|.|..++++|.-+. +-+| ++||.|-|.=|.--.|...-.-|-|.|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTG-GGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCS-SBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 577788888876542 2245 999999999999988988888888887774
No 77
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=72.20 E-value=46 Score=28.50 Aligned_cols=58 Identities=14% Similarity=-0.043 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
-++|...|++|..++.. .+ ..|.-.|...+...-+|...++.++|+..-.++|+..-.
T Consensus 191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 35689999999998853 33 223445666677777777889999999988888876543
No 78
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=72.13 E-value=17 Score=27.10 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+ .....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKY---SKAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4456666666543 2333 2334444544443 5777777665555544
No 79
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=72.00 E-value=14 Score=24.48 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+++ .|.+ .....+.+..++. +|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 5688889888864 2333 3445667776665 7999999987777664
No 80
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=71.09 E-value=38 Score=27.06 Aligned_cols=65 Identities=12% Similarity=0.095 Sum_probs=46.6
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCC--CcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh
Q 025992 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATE--LTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (245)
Q Consensus 5 ~re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~--L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~ 73 (245)
.-+.+..+|...-+.|+|++++..+.+++. .. |. +..+=...+..+|-. .+....|...+..+..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~--~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFT--YG-RTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGG--GC-SCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-CCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 456788899999999999999999999997 32 33 335556666666643 4666777777765443
No 81
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=70.76 E-value=34 Score=26.43 Aligned_cols=26 Identities=15% Similarity=0.161 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 9 ~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
+..++.+..+.|+|++++.++.++++
T Consensus 41 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 41 LNNRAAAEYEKGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 34556666666666666666666664
No 82
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=70.10 E-value=36 Score=26.34 Aligned_cols=49 Identities=8% Similarity=-0.006 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
.+.|...|++|+++ .|.+| ....+.+..++ .+|+.++|+...++++.-.
T Consensus 189 ~~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 189 FPEAIADCNKAIEK-----DPNFV---RAYIRKATAQI-AVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CHHHH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHHhC
Confidence 35688888888764 34443 33445555555 4799999999888887755
No 83
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=70.04 E-value=18 Score=24.16 Aligned_cols=47 Identities=19% Similarity=0.148 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5578888888763 4555421 45666766665 7999999887777664
No 84
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=69.81 E-value=20 Score=24.87 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...+++++
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457777777764 357788655666666666665 7999999998887765
No 85
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=68.84 E-value=89 Score=30.42 Aligned_cols=167 Identities=14% Similarity=0.162 Sum_probs=83.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH-HhhhhhcccchhhHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS-IEQKEEGRKNEEHVS 85 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~-ie~k~~~~~~~~~~~ 85 (245)
+-+..++.+..+.|+|++++.+.++.++ .+ |+. .+=.+-|..+|... +..-.|...+.. ++-+.... .....
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~--l~-P~~-~~a~~nLg~~l~~~-g~~~eA~~~~~~Al~l~P~~~--~a~~n 82 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALE--VF-PEF-AAAHSNLASVLQQQ-GKLQEALMHYKEAIRISPTFA--DAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-SCC-HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCH--HHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCCH--HHHHH
Confidence 4567789999999999999999999998 53 554 34455556655542 334444444332 21111100 01111
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHH
Q 025992 86 LVKDYR--SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI 163 (245)
Q Consensus 86 ~i~~yr--~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 163 (245)
+-.-|. .+. ++-...++..+.+ -|.. ..+++ ..|..|+-+ | -.+.|..+|++|+++
T Consensus 83 Lg~~l~~~g~~-~~A~~~~~kAl~l-----~P~~----~~a~~--~Lg~~~~~~-----g-----~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 83 MGNTLKEMQDV-QGALQCYTRAIQI-----NPAF----ADAHS--NLASIHKDS-----G-----NIPEAIASYRTALKL 140 (723)
T ss_dssp HHHHHHHTTCH-HHHHHHHHHHHHH-----CTTC----HHHHH--HHHHHHHHT-----T-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHHHHHHh-----CCCC----HHHHH--HHHHHHHHc-----C-----CHHHHHHHHHHHHHh
Confidence 111110 011 1122222333322 2321 12221 223333211 1 145688888888864
Q ss_pred HhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhh
Q 025992 164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAEL 211 (245)
Q Consensus 164 a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~l 211 (245)
.|.+| ....|.+.. |..+|+.++|++..+++++-.-..+
T Consensus 141 -----~P~~~---~a~~~L~~~-l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 -----KPDFP---DAYCNLAHC-LQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp -----CSCCH---HHHHHHHHH-HHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred -----CCCCh---HHHhhhhhH-HHhcccHHHHHHHHHHHHHhChhHH
Confidence 34444 233444443 3457888888888887776555443
No 86
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=68.57 E-value=11 Score=21.39 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025992 85 SLVKDYRSKVESELSDVCGSILKLLD 110 (245)
Q Consensus 85 ~~i~~yr~ki~~EL~~~c~eii~lid 110 (245)
+.++.||.+|.+.|..+.+.|-.++.
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45788999999999999999887764
No 87
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=67.38 E-value=53 Score=27.31 Aligned_cols=52 Identities=8% Similarity=-0.051 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (245)
-+.|...|++|+.+.... +. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 356899999999988642 22 22 333233334444556799999988766654
No 88
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=67.18 E-value=18 Score=26.25 Aligned_cols=47 Identities=6% Similarity=-0.007 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35688899999864 44544 345556665554 8999999876666554
No 89
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=67.02 E-value=19 Score=25.26 Aligned_cols=46 Identities=22% Similarity=0.132 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4466666666653 23333 334444444443 5777777666666554
No 90
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=66.73 E-value=22 Score=28.20 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHH-----HhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-----LALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLg-----L~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
-+.|..+|.+|+++.-. .|+..++.+. .-.|-+.-+.. +|+.++|+.-+.+|+.-
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 36699999999998743 3332333333 66676666555 79999999988777653
No 91
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=65.87 E-value=32 Score=24.13 Aligned_cols=55 Identities=15% Similarity=0.025 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
-+.|...|++|++++... + .+|.......+.+..++ -.|+.++|+...++|++-+
T Consensus 105 ~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAYT-ALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Confidence 356889999999988642 2 22333334445555444 5799999999888877654
No 92
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=65.80 E-value=8.4 Score=27.20 Aligned_cols=50 Identities=12% Similarity=0.050 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 347788888875 334467777777888887776 79999999988887653
No 93
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=65.33 E-value=28 Score=25.24 Aligned_cols=48 Identities=17% Similarity=0.096 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++.-.
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999864 466663 34566666554 799999998877776544
No 94
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=64.77 E-value=23 Score=24.34 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5678888888864 33443 34555666555 47999999988777765
No 95
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=64.01 E-value=23 Score=24.84 Aligned_cols=17 Identities=18% Similarity=0.282 Sum_probs=8.7
Q ss_pred hCCHHHHHHHHHHHHHH
Q 025992 190 LNSSEKACTMAKQAFEE 206 (245)
Q Consensus 190 ~~~~~~A~~iak~afd~ 206 (245)
+|+.++|+...++++..
T Consensus 90 ~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 90 MESYDEAIANLQRAYSL 106 (137)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHH
Confidence 45555555555554443
No 96
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=63.37 E-value=26 Score=23.82 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
.+.|...|++|+.. .|.+| ....+.+..++. +|+.++|+...+++++..-
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 35688888888765 23443 344566666655 7999999999888887653
No 97
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=62.99 E-value=25 Score=24.58 Aligned_cols=48 Identities=8% Similarity=0.015 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688899999865 34443 344555655554 799999999888887655
No 98
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=62.47 E-value=23 Score=26.53 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|.++|++|+++ .|.|| ....+.+..|+ -+|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~-~~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYM-DIGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 5688999999864 45554 33344444444 47888888887777644
No 99
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=60.73 E-value=24 Score=26.25 Aligned_cols=47 Identities=13% Similarity=0.019 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5689999999864 456653 34666666665 79999998766665543
No 100
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=59.88 E-value=27 Score=23.17 Aligned_cols=46 Identities=13% Similarity=0.017 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5578888888764 34443 34556665555 47999999887666543
No 101
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=59.80 E-value=90 Score=27.33 Aligned_cols=53 Identities=11% Similarity=0.092 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhh--cCCCCCcc---hHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 153 TMLSYKAAQDIALT--DLAPTHPI---RLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 153 a~~aY~~A~~~a~~--~L~pt~p~---rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 214 a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 214 ANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 34455555544432 45566653 2455565555566678999999998888765
No 102
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=59.59 E-value=27 Score=29.00 Aligned_cols=54 Identities=13% Similarity=-0.036 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
+.|..+|++|+++... +. +|...+.+++-.-..|..+|++++|+...++|+.-.
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~ 107 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIF 107 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5689999999998753 32 455555566555556667899999999888887643
No 103
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=59.11 E-value=36 Score=22.53 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|...|++|+.. .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888764 34443 344555555554 79999999988887763
No 104
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=59.04 E-value=34 Score=23.06 Aligned_cols=47 Identities=19% Similarity=0.113 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|...|++|+.. .|.+| ....+.+..++ .+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888864 34443 33455555555 479999999887776653
No 105
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=59.03 E-value=77 Score=26.30 Aligned_cols=54 Identities=9% Similarity=-0.024 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchH-HHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rL-gL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
.+.|...|++|+++... . .+|... ....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 35689999999998864 1 123333 345566766665 799999999888887654
No 106
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=58.87 E-value=11 Score=33.31 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhhc--------CCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTD--------LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~--------L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888899998865431 011567777888888888775 7999999998888765
No 107
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=58.84 E-value=35 Score=23.03 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+....+++..
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYSK-LGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHHH-hhchHHHHHHHHHHHhc
Confidence 5578888888764 23332 344555555554 79999999998888763
No 108
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=57.49 E-value=33 Score=24.60 Aligned_cols=46 Identities=7% Similarity=-0.135 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5678888888865 34443 344555655554 7999999988877765
No 109
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=57.42 E-value=20 Score=27.30 Aligned_cols=47 Identities=11% Similarity=0.015 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35689999999864 466663 45566766664 8999999886666554
No 110
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=56.70 E-value=37 Score=25.98 Aligned_cols=49 Identities=22% Similarity=0.329 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-------------chHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHP-------------IRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p-------------~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+....+|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45778888887643 3333 123456667776665 7999999988888765
No 111
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=56.63 E-value=85 Score=26.08 Aligned_cols=111 Identities=19% Similarity=0.288 Sum_probs=63.3
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHHHHHHH
Q 025992 12 LAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYR 91 (245)
Q Consensus 12 ~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~i~~yr 91 (245)
.|+|.+...+|--||+-+|.-.. +..|..|.=.-||=-+.. ++.+. ..+.++..=+..-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~~---KdSeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKKN---KDQERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHHT---CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhcc---chHHHHHHhHHHh
Confidence 57788888888778777754331 134555666666655443 23221 2223332222233
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 025992 92 SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (245)
Q Consensus 92 ~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (245)
.+-+.--..+|-|+|+-.+ ++-|.|+|.++|..+. +=...--|-+|++.|..
T Consensus 159 ssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 3344455667777776555 4567888888886653 22234467888887754
No 112
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.31 E-value=38 Score=23.74 Aligned_cols=46 Identities=9% Similarity=-0.050 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5678888888765 34443 344556665554 7999999887776654
No 113
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=56.27 E-value=34 Score=25.30 Aligned_cols=46 Identities=11% Similarity=0.151 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|.+.|++|+++ .|.|| ....+.+..|+ .+|+.++|+..-++|++
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5688888888864 45554 23344454444 47999999887777654
No 114
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=55.26 E-value=55 Score=23.50 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 8 ~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
-+..++.+..+.|+|++++..+++++. .. +. +..-...++.+|- ..+....+...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYD--AD-AF-DVDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCC--TT-SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH--hC-cc-ChHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 345678888889999999999998886 32 33 3333444444443 23444555555543
No 115
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=55.06 E-value=54 Score=25.70 Aligned_cols=47 Identities=13% Similarity=0.105 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 35577788877764 34443 233444444444 7999998888887765
No 116
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=54.25 E-value=45 Score=22.18 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4456666666543 22222 223344444433 5777777766666554
No 117
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=53.88 E-value=42 Score=24.03 Aligned_cols=48 Identities=25% Similarity=0.177 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
.+.|...|++|+.+. |.+ ..+..+.+..++. +|+.++|+...++++..
T Consensus 29 ~~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 29 YENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 356888888888642 333 3445556665554 79999999988887653
No 118
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=52.94 E-value=41 Score=24.95 Aligned_cols=46 Identities=7% Similarity=0.011 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 5578888888864 34443 445566666665 7999999887776654
No 119
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=52.86 E-value=51 Score=22.38 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR 230 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLr 230 (245)
+.|...|++|+++ .|.+|. ...+.+..|+ .+|+.++|+...++|+.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 5688899998864 344443 4455566555 4899999999888888765332 12233455556666
Q ss_pred hhHhhhh
Q 025992 231 DNLTLWT 237 (245)
Q Consensus 231 dNl~~W~ 237 (245)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5555554
No 120
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.69 E-value=22 Score=25.02 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=22.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
.-+++++.++.+.|+|++++.+..++++
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3567788888888888888888888886
No 121
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=52.07 E-value=98 Score=25.40 Aligned_cols=52 Identities=8% Similarity=-0.051 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchH-HHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rL-gL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|..+|++|+++.... .+|... ....|.+.++.. +|+.++|+...+++.+
T Consensus 134 ~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD---QSVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 366899999999987532 122222 344566776665 7999999987776654
No 122
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=52.03 E-value=25 Score=31.71 Aligned_cols=53 Identities=17% Similarity=0.234 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhhcCCC--------CCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAP--------THPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~p--------t~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+.... +. .+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEME-YGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTTC-CSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 56888999998765321 10 234667788888888776 7999999998888754
No 123
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=51.89 E-value=42 Score=25.64 Aligned_cols=46 Identities=11% Similarity=-0.020 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+ ....++.+..|+. +|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNN---VKALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688888888875 3344 3445566666554 7999999887777654
No 124
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=51.57 E-value=50 Score=21.93 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|....+++++
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4577888888764 34443 334556666654 7999999888777664
No 125
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=51.48 E-value=14 Score=31.76 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhcC-------CCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDL-------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L-------~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|..+|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 457777777776542110 00124445666677766665 6777777777766644
No 126
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=51.18 E-value=43 Score=25.43 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688899999875 24443 445666666665 7999999998888876
No 127
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=50.76 E-value=43 Score=26.13 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=25.8
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
-+.++..+...-+.|+|++++.++.+++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA 32 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46778889888999999999999999987
No 128
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=50.00 E-value=24 Score=24.19 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+. +.|.+ .....+.+..++. .|+.++|+...++++.
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQ 78 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457788888874 34444 3445555655544 7999999998888776
No 129
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=49.91 E-value=59 Score=22.21 Aligned_cols=50 Identities=14% Similarity=0.010 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
.+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++++...-
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 35688899998864 34443 334556665554 7999999998888776543
No 130
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=48.73 E-value=1e+02 Score=24.62 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=24.8
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
-.-+..++.+..+.|+|++++.+++++++
T Consensus 55 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 83 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHARM 83 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 34556788899999999999999999987
No 131
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=47.54 E-value=55 Score=24.74 Aligned_cols=46 Identities=11% Similarity=0.071 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+ .|.||. ...|.++.++. +|+.++|+...++|+.
T Consensus 53 ~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 53 EEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 5688888888754 566654 34555665554 7999999987766643
No 132
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=47.40 E-value=60 Score=23.32 Aligned_cols=47 Identities=13% Similarity=0.057 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (245)
+.|.+.|+++... .|.+| ....+.+..++ ..|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 4577788887764 33333 33455555554 479999999988887654
No 133
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=47.06 E-value=40 Score=30.72 Aligned_cols=15 Identities=13% Similarity=-0.028 Sum_probs=7.2
Q ss_pred hCCHHHHHHHHHHHH
Q 025992 190 LNSSEKACTMAKQAF 204 (245)
Q Consensus 190 ~~~~~~A~~iak~af 204 (245)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555554444443
No 134
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=46.82 E-value=70 Score=22.20 Aligned_cols=53 Identities=17% Similarity=0.040 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
..|..-|+.|+......-. ..+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 4577888888877642211 12334444455555555 58999999998888764
No 135
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=45.17 E-value=91 Score=23.06 Aligned_cols=57 Identities=9% Similarity=-0.124 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (245)
.+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...++|++-+-.
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 45689999999998853 2 345555555555555555689999999988887776544
No 136
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=44.67 E-value=29 Score=24.81 Aligned_cols=47 Identities=9% Similarity=0.075 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|..+|++|+++ .|.+| ....+.++.+.. +|+.++|+...++++.
T Consensus 67 ~~~A~~~~~~al~l-----~P~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 67 DGLAIIALNHARML-----DPKDI---AVHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688999999864 45554 344566665554 6899998887776653
No 137
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=44.53 E-value=48 Score=27.67 Aligned_cols=69 Identities=17% Similarity=0.118 Sum_probs=43.3
Q ss_pred CCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh----hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 025992 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (245)
Q Consensus 40 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~----k~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~L 113 (245)
|+||.|-|.=|....|...-.-|-|.|.+..-.. +.+..+. .-++-.++.++++..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~~-----isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGE-----ITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-----SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888888888752111 1110110 1133344556666666666666666543
No 138
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=44.15 E-value=38 Score=28.08 Aligned_cols=49 Identities=12% Similarity=0.015 Sum_probs=28.1
Q ss_pred HHHHHHHHHhh--cCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025992 156 SYKAAQDIALT--DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (245)
Q Consensus 156 aY~~A~~~a~~--~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (245)
-|++|....+. .+.|.++ ....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 53 ~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSV---KAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 34555555543 3444443 34445555544 47888888887777776543
No 139
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=43.54 E-value=29 Score=31.36 Aligned_cols=53 Identities=9% Similarity=0.028 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhh
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAEL 211 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~l 211 (245)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 45688888888742 23 2457888888999999999999999999999998754
No 140
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=43.40 E-value=78 Score=29.61 Aligned_cols=65 Identities=23% Similarity=0.341 Sum_probs=38.9
Q ss_pred ccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chHHHhhhH------HHHHHHH----hCCHHHH
Q 025992 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNF------SVFYYEI----LNSSEKA 196 (245)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---~rLgL~LN~------SVF~yei----~~~~~~A 196 (245)
-||..||.... ..|...|.+|..+. |.+- ..||+.-.+ +||||-- ..-...|
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~-----P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a 222 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLV-----PSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAA 222 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHC-----TTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhC-----CCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhH
Confidence 79999999764 57899999998754 2221 466655544 5676641 1123334
Q ss_pred HHHHHHHHHHHHH
Q 025992 197 CTMAKQAFEEAIA 209 (245)
Q Consensus 197 ~~iak~afd~a~~ 209 (245)
..=....|+.+.+
T Consensus 223 ~~nL~~~f~~~~~ 235 (497)
T 1ya0_A 223 STNLQKALSKALE 235 (497)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 4444445555443
No 141
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=43.28 E-value=73 Score=23.43 Aligned_cols=46 Identities=11% Similarity=-0.022 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+. +.|.+|.- ..+.++.++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 457778887765 35666533 3455665554 7999999998887754
No 142
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=43.19 E-value=45 Score=25.34 Aligned_cols=55 Identities=13% Similarity=-0.017 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDL--------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--------~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+.
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3568889999886542100 00334445566777777665 7999999887666543
No 143
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=42.44 E-value=38 Score=26.78 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=53.9
Q ss_pred ccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chHHHhhhHHHHH----HHHhCCHHHHHHHHHH
Q 025992 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNFSVFY----YEILNSSEKACTMAKQ 202 (245)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---~rLgL~LN~SVF~----yei~~~~~~A~~iak~ 202 (245)
.|.-+.=+..+..+.+.....+.|..+|++|+++ .|.++ ..||.++.---++ -+-.|+.++|++
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 4445555566667777777889999999999864 45554 3455554322111 111245666666
Q ss_pred HHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhh
Q 025992 203 AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 237 (245)
Q Consensus 203 afd~a~~~ld~l~ee~~~ds~~ilqlLrdNl~~W~ 237 (245)
+|+.|+.. +.+ +.+...-+++..++-.+|.
T Consensus 113 ~~~kAl~l----~P~-~~~y~~al~~~~ka~el~~ 142 (158)
T 1zu2_A 113 FFQQAVDE----QPD-NTHYLKSLEMTAKAPQLHA 142 (158)
T ss_dssp HHHHHHHH----CTT-CHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHh----CCC-CHHHHHHHHHHHhCHhccC
Confidence 56666552 222 2344555666666666664
No 144
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=42.16 E-value=1.5e+02 Score=24.75 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=20.2
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
+-+..++.+..+.|+|++++..+++++.
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3456677777777777777777777776
No 145
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=42.01 E-value=87 Score=22.10 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++|+.+ .|.+| ....+.++.+.. +|+.++|+...++|+.
T Consensus 33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688888888763 34444 334455555554 7999999987666654
No 146
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=41.38 E-value=82 Score=21.42 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=42.2
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (245)
-.-+..++.+..+.|+|++++.++++++. .. |. ..+=...+..+|.. .+....|...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD--FD-PT-YSVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH--HC-CC-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34566788999999999999999999997 43 44 34455666666654 3555566655543
No 147
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=40.83 E-value=1.2e+02 Score=23.31 Aligned_cols=62 Identities=6% Similarity=-0.057 Sum_probs=41.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHh
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIE 72 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie 72 (245)
..-+..+|.+..+.|+|++++.+++++++ .. +. +..-...+..+|-. .+....+.+.+....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALA--SD-SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HC-cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 34556788999999999999999999987 43 43 34444555555533 455556666665443
No 148
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=40.76 E-value=94 Score=24.27 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++++. ..|.+|..-...++.+..|+. .|+.++|+...+++++
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 557778877765 356677655555555555554 7999999987777654
No 149
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=40.72 E-value=61 Score=26.86 Aligned_cols=46 Identities=7% Similarity=0.083 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|++.. |.+ ..+.++++.|+.. +|+.++|+.+-.+|+.
T Consensus 186 ~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 186 SVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 56788888888653 333 4566888877654 6888888776666554
No 150
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=40.56 E-value=79 Score=21.02 Aligned_cols=46 Identities=20% Similarity=0.328 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|+++... .|.+| ....+.+..++ ..|+.++|+....+++.
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 4567777777654 23333 22334444443 46888888887777665
No 151
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=40.43 E-value=1e+02 Score=22.40 Aligned_cols=26 Identities=8% Similarity=0.144 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 9 ~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
+..++.+..+.|+|++++.++.+.++
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34445555555555555555555554
No 152
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=40.12 E-value=61 Score=23.86 Aligned_cols=26 Identities=27% Similarity=0.441 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 9 ~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
...+|++..+.|+|++++++++++++
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46789999999999999999999998
No 153
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=39.99 E-value=87 Score=25.50 Aligned_cols=71 Identities=14% Similarity=0.164 Sum_probs=45.0
Q ss_pred CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 025992 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (245)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~L 113 (245)
.|+||.|-|.=|....|...-.-|-+.|.+..-..+.-.+. . +.-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~-~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEEL-E---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-T---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999998888888888752111110000 0 01234445566666666666666666543
No 154
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=39.04 E-value=1.4e+02 Score=23.51 Aligned_cols=64 Identities=20% Similarity=0.133 Sum_probs=45.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhh---------hhhhhHHHHHHHHHhhh
Q 025992 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV---------IGSLRAAWRIISSIEQK 74 (245)
Q Consensus 10 ~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~---------i~~~R~s~R~l~~ie~k 74 (245)
..+|.+..+.|+|++++..++++++.. .......+-...+..+|.+. .+....|...+..+...
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAY-PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC-CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH
Confidence 678999999999999999999999732 11334567777888888755 25556666666554433
No 155
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=38.74 E-value=80 Score=23.23 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCH--HHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSS--EKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~--~~A~~iak~afd 205 (245)
.+.|..+|++|+.+. |.+| ....+++..+|...|+. ++|+...++++.
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 356889999998764 3443 34556666656567887 999888777765
No 156
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=38.40 E-value=77 Score=25.83 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=42.9
Q ss_pred CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh----hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 025992 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (245)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~----k~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~ 112 (245)
.|+||.|-|.=|....|...-.-|-+.|.+..--. +.+..+ ..-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1dd5_A 102 FPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999998888888888742111 111000 0113344455566666666666666554
No 157
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=38.28 E-value=96 Score=21.36 Aligned_cols=10 Identities=10% Similarity=0.262 Sum_probs=5.0
Q ss_pred HHHHHHHHHH
Q 025992 153 TMLSYKAAQD 162 (245)
Q Consensus 153 a~~aY~~A~~ 162 (245)
|...|++|+.
T Consensus 62 A~~~~~~al~ 71 (137)
T 3q49_B 62 ALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4455555544
No 158
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=38.19 E-value=57 Score=24.15 Aligned_cols=48 Identities=17% Similarity=0.230 Sum_probs=35.0
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhh----------------hhhHHHHHHH
Q 025992 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG----------------SLRAAWRIIS 69 (245)
Q Consensus 20 ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~----------------~~R~s~R~l~ 69 (245)
++|+.++++++.+-. .+...++.+++-.|-.-||.... .+..||..+.
T Consensus 10 ~~F~~A~~~vk~l~~--~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~ 73 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPK--NGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLG 73 (106)
T ss_dssp HHHHHHHHHHHHSCS--SCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhc
Confidence 678888999888653 22236899999988888888753 2567787764
No 159
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=38.05 E-value=1.4e+02 Score=24.20 Aligned_cols=31 Identities=26% Similarity=0.163 Sum_probs=27.1
Q ss_pred CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025992 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (245)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 69 (245)
.|+||.|-|.=|....|...-.-|-+.|.+.
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniR 132 (185)
T 1wqg_A 102 VPQLTEERRRELVKQAKHKGEEAKVSVRNIR 132 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3889999999999999998888888888874
No 160
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=37.37 E-value=73 Score=24.55 Aligned_cols=47 Identities=6% Similarity=0.039 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
-+.|...|++|++ +.|. ......+.+..|+. +|+.++|+...++++.
T Consensus 58 ~~~A~~~~~~al~-----~~p~---~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 58 YKEAADYFDIAIK-----KNYN---LANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHHH-----TTCS---HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCcc---hHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 3568888888874 3344 44455666666655 7999999998887765
No 161
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=36.62 E-value=81 Score=25.71 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=42.2
Q ss_pred CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh----hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 025992 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (245)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~----k~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~ 112 (245)
.|+||.|-|.=|....|...-.-|-+.|.+..--. +.+..+ ..-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 102 LPPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999998888888888742111 111001 0113334455556666666655555543
No 162
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=36.23 E-value=1.8e+02 Score=23.85 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|...|++|+... .++|.++ ..+-.++..|+.. .|+.+.|..+.+++.+
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 467899999997531 3565433 3456777778766 6999999877666554
No 163
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=35.86 E-value=86 Score=25.53 Aligned_cols=69 Identities=22% Similarity=0.158 Sum_probs=42.6
Q ss_pred CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHh----hhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 025992 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIE----QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (245)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie----~k~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~ 112 (245)
.|+||.|-|.=|....|...-.-|-+.|.+..-- .+.+..+ ..-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 102 LPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3889999999999999999888888888874211 1111011 0113334455566666666666655544
No 164
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=34.05 E-value=1.3e+02 Score=21.74 Aligned_cols=70 Identities=6% Similarity=-0.109 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR 230 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ds~~ilqlLr 230 (245)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 5578888888765 45554 344555555554 79999998876665543 2222223445555555
Q ss_pred hhHhhhh
Q 025992 231 DNLTLWT 237 (245)
Q Consensus 231 dNl~~W~ 237 (245)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5554443
No 165
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=33.95 E-value=94 Score=26.43 Aligned_cols=46 Identities=11% Similarity=-0.003 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|..+|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4578888888764 34443 334455555554 6888888877766654
No 166
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=33.01 E-value=81 Score=25.69 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=44.0
Q ss_pred CCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 025992 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (245)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eii~lid~~L 113 (245)
.|+||.|-|.=|....|...-.-|-+.|.+..--.+.- +........-++-.++.++++..+.+..+.-||..+
T Consensus 103 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 103 IPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999998888888888742111000 000000001134444566666666666666666543
No 167
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=32.62 E-value=83 Score=30.65 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
.+.|.++|++|+++ .|.+ .....|.+..|++ +|+.++|+...++|+.
T Consensus 93 ~~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 93 VQGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35689999999875 3444 3455666766665 7999999998888765
No 168
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=32.30 E-value=43 Score=29.54 Aligned_cols=48 Identities=8% Similarity=0.049 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcch-HHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~r-LgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
-++|.+.|++|+++. |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 220 ~ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 220 MEKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 356999999999875 543 666778888888778999999887777765
No 169
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=32.21 E-value=1.5e+02 Score=21.99 Aligned_cols=29 Identities=24% Similarity=0.166 Sum_probs=23.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
-+-+..++.+..+.|+|++++..+.+++.
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 136 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILK 136 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 34566788888888899998888888887
No 170
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=31.94 E-value=1.2e+02 Score=20.42 Aligned_cols=59 Identities=15% Similarity=0.126 Sum_probs=40.2
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 69 (245)
-.-+..++.+..+.|+|++++.+++++++ .+ |.. ..=...+..+|.. .+..-.|...+.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE--TD-PDY-VGTYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HS-TTC-THHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCc-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34567889999999999999999999998 43 553 3345556666643 344444444443
No 171
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=31.69 E-value=24 Score=25.75 Aligned_cols=59 Identities=12% Similarity=0.228 Sum_probs=36.8
Q ss_pred hHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH----HhhhHHHHHH
Q 025992 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG----LALNFSVFYY 187 (245)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLg----L~LN~SVF~y 187 (245)
+.+|+ .|+.--||-.+...-+ .-+..+.+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 6 ~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 6 TPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 44565 4455556665554321 12455666777777544 36899999998 6667887753
No 172
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=31.59 E-value=1.1e+02 Score=20.17 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 9 ~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
+..++.+....|+|++++..+++++.
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~ 29 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALE 29 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 45678888889999999999999887
No 173
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=30.73 E-value=32 Score=28.30 Aligned_cols=38 Identities=32% Similarity=0.518 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025992 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (245)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (245)
-+.|.++|++|..- .-+ |. .++...+|+.|||.+||.=
T Consensus 19 YE~A~~~Ye~a~~n---g~~---pQ--------------~~Kql~KA~NIAKse~drd 56 (199)
T 3ub0_A 19 YEKARADLEEAKKN---DVS---PQ--------------LLKQLTKACNIAKSEFERE 56 (199)
T ss_dssp HHHHHHHHHHHHHT---TCC---HH--------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CCC---HH--------------HHHHHHHHHHHHHHHHhHH
Confidence 46788899888532 222 21 3577889999999999843
No 174
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=28.19 E-value=2.1e+02 Score=22.14 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=42.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~ 73 (245)
+.+..+|...-+.|+|++++..+++++... ...+...+-...+..+|-. .+....|...+..+.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 456678888999999999999999999722 1123444555556655533 4556666666655443
No 175
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=27.70 E-value=2e+02 Score=27.19 Aligned_cols=52 Identities=19% Similarity=-0.012 Sum_probs=33.5
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC-cchHHHhhhHHHHHHHHhC
Q 025992 138 AEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILN 191 (245)
Q Consensus 138 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~-p~rLgL~LN~SVF~yei~~ 191 (245)
+|....+.-.+++++|.++|++|++..+. +..|+ |--.-..|+- +-.||.-|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aG 488 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAG 488 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhcc
Confidence 55566667778999999999999999964 55444 4333333333 23366543
No 176
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=27.28 E-value=3.1e+02 Score=23.91 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=37.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhh-hhHHHHHHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS-LRAAWRIIS 69 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~-~R~s~R~l~ 69 (245)
+-+.+++.+....|+|++++....+++. .+ |. +.+=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~--l~-P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIE--LN-AA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHH--hC-cc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 4566788888889999999999999998 43 44 333444455555433 32 445555444
No 177
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=26.46 E-value=87 Score=26.74 Aligned_cols=49 Identities=16% Similarity=0.176 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------chHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHP--------------IRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p--------------~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45788888888653 2333 122467788887765 7999999999888765
No 178
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=26.42 E-value=1.3e+02 Score=19.29 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=15.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 9 ~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
+..++.+..+.|+|++++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34455555556666666666666655
No 179
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=26.23 E-value=1.8e+02 Score=20.65 Aligned_cols=27 Identities=22% Similarity=0.251 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 8 ~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
.+..+|....+.|+|++++.++++++.
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~ 46 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCM 46 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 344455555556666666666666554
No 180
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=25.29 E-value=69 Score=25.64 Aligned_cols=75 Identities=16% Similarity=0.086 Sum_probs=48.0
Q ss_pred CCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC----cchHHHhhhHHHHHHHHhC
Q 025992 116 SATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTH----PIRLGLALNFSVFYYEILN 191 (245)
Q Consensus 116 ~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~----p~rLgL~LN~SVF~yei~~ 191 (245)
++.++++-.-|.++--.. -.+..+ ...++-.+.|++|.. .+||+. .-+.-|=++|+.| .++ +
T Consensus 9 ~p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~ 74 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-Q 74 (161)
T ss_dssp -CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-H
T ss_pred CCCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-c
Confidence 345577777777752211 001112 466778899998874 477753 3455688999999 454 8
Q ss_pred CHHHHHHHHHHHH
Q 025992 192 SSEKACTMAKQAF 204 (245)
Q Consensus 192 ~~~~A~~iak~af 204 (245)
|+++|.++=+.|.
T Consensus 75 D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 75 EPDDARDYFQMAR 87 (161)
T ss_dssp CGGGCHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9998888777763
No 181
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=25.27 E-value=1.5e+02 Score=19.37 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=25.3
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
-+.+..++.+....|+|++++....+.+.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 35667788888899999999999999997
No 182
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=25.22 E-value=93 Score=25.58 Aligned_cols=28 Identities=11% Similarity=0.082 Sum_probs=20.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
+.+..+|.+..+.|+|++++.++.+.+.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAIT 32 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556677777777888888877777775
No 183
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=25.20 E-value=2.1e+02 Score=21.12 Aligned_cols=164 Identities=8% Similarity=-0.050 Sum_probs=84.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhcccch-hhHH
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE-EHVS 85 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie~k~~~~~~~-~~~~ 85 (245)
+-+..++.+..+.|+|++++.++.++++ .. +. +..-...+..+|-...+....+...+....+........ ....
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALS--IK-PD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHH--hC-CC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 4556788899999999999999999987 43 33 344455566665443255666666665544311111100 1111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHH
Q 025992 86 LVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (245)
Q Consensus 86 ~i~~yr~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (245)
...-|.. .=-++-...+..++.+ -|.. ..+ +...|..|.- .|+ .+.|...|++++...
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~----~~~--~~~la~~~~~-----~~~-----~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAA-----QPQF----PPA--FKELARTKML-----AGQ-----LGDADYYFKKYQSRV 177 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----STTC----HHH--HHHHHHHHHH-----HTC-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC----chH--HHHHHHHHHH-----cCC-----HHHHHHHHHHHHHhC
Confidence 1111111 0012223333333332 1221 111 1223333211 111 356788888887653
Q ss_pred hhcCCC-CCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 165 LTDLAP-THPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 165 ~~~L~p-t~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (245)
| .+|.. ++....+|...|+.+.|....+.+.
T Consensus 178 -----~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~ 209 (225)
T 2vq2_A 178 -----EVLQADD----LLLGWKIAKALGNAQAAYEYEAQLQ 209 (225)
T ss_dssp -----CSCCHHH----HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----CCCCHHH----HHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3 44443 3444556667899999887766654
No 184
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=24.89 E-value=6.9e+02 Score=27.10 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=20.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 181 NFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 181 N~SVF~yei~~~~~~A~~iak~af 204 (245)
.-.|-+|+-.|..++|+.+..+|+
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 355678899999999999999983
No 185
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=24.30 E-value=2.8e+02 Score=22.54 Aligned_cols=29 Identities=21% Similarity=0.129 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 6 re~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
-+-...+|.+..+.|||++++..+.+++.
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLR 247 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 44567788888889999999999988887
No 186
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.49 E-value=1.9e+02 Score=23.77 Aligned_cols=46 Identities=11% Similarity=0.054 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|+++++. .|.+| .+..|.++.+. -+|+.++|...-++|+.
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~---~~~~~la~~~~-~~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTL---LLLNGQAACHM-AQGRWEAAEGVLQEALD 228 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 4455666665542 33333 34444555544 47999999988777765
No 187
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=22.91 E-value=1.5e+02 Score=30.32 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=42.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHhhhhhh--hhHHHHHHHHH
Q 025992 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS--LRAAWRIISSI 71 (245)
Q Consensus 10 ~~~Aklaeq~ery~Dm~~~mk~i~~~~~~~~~L~~eERnLls~ayKn~i~~--~R~s~R~l~~i 71 (245)
...++|.++.+.|+-++++-+..++.. + ++-..-...|.+.-||..+.- .-.|+-.|.+.
T Consensus 903 ~hv~~LFe~~~~~~~vi~fa~lAi~~~-~-~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 903 LHLSKKLFEESAYIDALEFSLLADASK-E-TDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHC-C-SCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhc-c-CCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 456789999999999999999888732 1 333333455788888887643 44677777654
No 188
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=22.23 E-value=1.8e+02 Score=26.30 Aligned_cols=46 Identities=26% Similarity=0.378 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|.+.|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 74 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 74 AEAAVLLQQASDA-----APEHP---GIALWLGHALED-AGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5577777777654 23332 333445544443 6777777776666554
No 189
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=21.97 E-value=4.3e+02 Score=23.67 Aligned_cols=28 Identities=7% Similarity=-0.082 Sum_probs=23.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 7 e~~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
+-+..+|.+..+.|+|++++.++++.++
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 51 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLA 51 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566788888889999999999999987
No 190
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=21.32 E-value=1.7e+02 Score=18.83 Aligned_cols=26 Identities=8% Similarity=0.071 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 9 ~~~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
.+.+|...-+.|+|++++..++++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~ 28 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQ 28 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35678888899999999999999997
No 191
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=21.14 E-value=3.5e+02 Score=22.34 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=11.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhh
Q 025992 11 YLAKLAEQAERYEEMVKFMDSLVT 34 (245)
Q Consensus 11 ~~Aklaeq~ery~Dm~~~mk~i~~ 34 (245)
.++.+.-+.|+++++..+.+..+.
T Consensus 38 ~l~~~~~~~~~~~~a~~~~~~a~~ 61 (388)
T 1w3b_A 38 LLSSIHFQCRRLDRSAHFSTLAIK 61 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHh
Confidence 344444444555555555444443
No 192
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=20.93 E-value=1.5e+02 Score=25.76 Aligned_cols=46 Identities=17% Similarity=0.110 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (245)
+.|...|++|++ +.|.+| ....+.+..|+ .+|+.++|+...++|+.
T Consensus 290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~-~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQ-GLKEYDQALADLKKAQE 335 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHH-HccCHHHHHHHHHHHHH
Confidence 457888888875 445554 33445555555 47999999887776654
No 193
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=20.86 E-value=3.5e+02 Score=23.95 Aligned_cols=45 Identities=9% Similarity=-0.051 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025992 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (245)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (245)
+.|..+|++|+++ .|.++ ...+|.+..|+. +|+.++|+...++|+
T Consensus 334 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~a~~~-~g~~~~A~~~~~~al 378 (457)
T 1kt0_A 334 TKAVECCDKALGL-----DSANE---KGLYRRGEAQLL-MNEFESAKGDFEKVL 378 (457)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 4588888888864 33443 334555555554 799999887666654
Done!