BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025993
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SL43|MSRA5_ARATH Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana
GN=MSRA5 PE=2 SV=1
Length = 254
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/238 (71%), Positives = 202/238 (84%), Gaps = 3/238 (1%)
Query: 7 YLFFSVLHLLLLTDTALCIRFPDRVSTSINDELGRPLKAAVFALGSFWRSEAVFGCLNGV 66
+ FF + LL D + IR +++S ++ D RPLK+AVFALGSFWRSEA FGC+NGV
Sbjct: 19 FFFFLCVSLL---DKTVSIRISNQISDTVVDSPDRPLKSAVFALGSFWRSEAAFGCINGV 75
Query: 67 VRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPD 126
VRT+ GYAGG+KTNPE+RNLGDHAESVQVEYDPR+I +RQLL+VFW+SHD RQVFGQGPD
Sbjct: 76 VRTSAGYAGGTKTNPEYRNLGDHAESVQVEYDPRIIGYRQLLDVFWSSHDSRQVFGQGPD 135
Query: 127 VGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKR 186
VGNQYRS IFTN TEE RLA+ SKEREQ+ ++SSIVTTQIQQL FY AEP+HQKFELK+
Sbjct: 136 VGNQYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQLGTFYRAEPDHQKFELKQ 195
Query: 187 NPFLIHLMGNLPQEELEKSNLAAKLNSYAAELCPPRIQKQIDAKIKDIIRKGWPILRD 244
+PFLI L+GN+ +EELE+S LA KLN YAAELCPPRIQK ID+++ +IIRKGWP+LRD
Sbjct: 196 HPFLIQLIGNMVEEELERSALATKLNGYAAELCPPRIQKHIDSRVNEIIRKGWPVLRD 253
>sp|Q5VPG8|MSRA5_ORYSJ Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp.
japonica GN=MSRA5 PE=2 SV=1
Length = 254
Score = 318 bits (815), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 145/197 (73%), Positives = 170/197 (86%)
Query: 48 FALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQL 107
FALGSFWRSEA FGCL GV+RT+VGYAGGSK PE+RNLGDHAE V+VEYDPR+I +++L
Sbjct: 57 FALGSFWRSEAAFGCLPGVIRTSVGYAGGSKARPEYRNLGDHAECVKVEYDPRLIQYKKL 116
Query: 108 LEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQ 167
LEVFW SHD R+VFGQGPDVGNQYRSIIFTNG+ E+RLA SKE+EQ K + S++TTQIQ
Sbjct: 117 LEVFWASHDPREVFGQGPDVGNQYRSIIFTNGSVEARLAGLSKEKEQAKDRRSVITTQIQ 176
Query: 168 QLVAFYPAEPEHQKFELKRNPFLIHLMGNLPQEELEKSNLAAKLNSYAAELCPPRIQKQI 227
+ AFYPAEPEHQKFELKR PFL+ L+GNLP+EEL S LAAKLN+YAAELC P Q +I
Sbjct: 177 PIGAFYPAEPEHQKFELKRKPFLLQLIGNLPEEELLTSTLAAKLNAYAAELCSPNTQNRI 236
Query: 228 DAKIKDIIRKGWPILRD 244
++KI +I +KGWPILRD
Sbjct: 237 NSKIDEIAKKGWPILRD 253
>sp|P08761|MSRA_DROME Peptide methionine sulfoxide reductase OS=Drosophila melanogaster
GN=Eip71CD PE=2 SV=2
Length = 246
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 107/172 (62%), Gaps = 5/172 (2%)
Query: 45 AAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINF 104
A F +G FW +E+++G GV+RTTVGYAGGS P +R +GDH E ++++YDP VI+F
Sbjct: 41 TATFGMGCFWGAESLYGATRGVLRTTVGYAGGSSDLPTYRKMGDHTEVLEIDYDPTVISF 100
Query: 105 RQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTT 164
++LL++FW +H+ +G + QY S+I + E+ ++A SK EQ + I+TT
Sbjct: 101 KELLDLFWNNHE----YGLTTPIKRQYASLILYHDEEQKQVAHASKLEEQERRAPEIITT 156
Query: 165 QIQQLVAFYPAEPEHQKFELKRNPFLIHLMGNLPQEELEKSNLAAKLNSYAA 216
+I FYPAE HQK+ L+ + L + NL + L+ S +A KLN Y A
Sbjct: 157 EIASKENFYPAEAYHQKYRLQGHKDLASSL-NLSPKLLQTSYVATKLNGYLA 207
>sp|Q6LYY1|MSRA_METMP Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain S2 / LL) GN=msrA PE=3 SV=1
Length = 157
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 41 RPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEF----RNLGDHAESVQVE 96
+ +K VF +G FW +E VF +NGVV T VG+ GG+ NP + R H E V+++
Sbjct: 2 KNIKTTVFGMGCFWGAEEVFRKINGVVSTEVGFMGGTIKNPTYGQVCRGKSGHIEVVKID 61
Query: 97 YDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMK 156
YDP +I++ +LL++FW +H+ QG DVG QY S IF E+ +A S E+ Q
Sbjct: 62 YDPEIISYDELLDLFWNNHNPTTPNKQGWDVGEQYSSYIFYFDDEQKLIAEKSLEKMQEN 121
Query: 157 SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHL 193
+ IVT I++ +FYPAE HQK+ +K+N +++
Sbjct: 122 TDLKIVTI-IEKAGSFYPAEEYHQKYFMKKNNSILNF 157
>sp|A9MEZ2|MSRA_SALAR Peptide methionine sulfoxide reductase MsrA OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=msrA PE=3
SV=1
Length = 212
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V+V YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRVVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+S A S+ER Q
Sbjct: 103 PAVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQSTAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 189
+ +TT+I FY AE EHQ++ L +NP+
Sbjct: 163 DAGDERPITTEIAHATPFYYAEDEHQQY-LHKNPY 196
>sp|B4TT49|MSRA_SALSV Peptide methionine sulfoxide reductase MsrA OS=Salmonella
schwarzengrund (strain CVM19633) GN=msrA PE=3 SV=1
Length = 212
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL++FW +HD Q QG D G QYRS I+ E+S A S+ER Q
Sbjct: 103 PAVIRYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQSAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGNHRPITTEITHATPFYYAEDEHQQY-LHKNP 195
>sp|A7MM56|MSRA_CROS8 Peptide methionine sulfoxide reductase MsrA OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=msrA PE=3 SV=1
Length = 212
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V+V YD
Sbjct: 43 MEVALFAMGCFWGVERLFWALPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG DVG QYRS I+ E+ A S ER + +
Sbjct: 103 PNVISYEQLLQVFWENHDPAQGMRQGNDVGTQYRSAIYPLTPEQEAAAQASLERFRAAME 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDYRHITTEIAPAKPFYYAEDEHQQY-LHKNP 195
>sp|B2TZL3|MSRA_SHIB3 Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=msrA PE=3
SV=1
Length = 212
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E++F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVESLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q8ZK71|MSRA_SALTY Peptide methionine sulfoxide reductase MsrA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=msrA PE=3 SV=1
Length = 212
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMT 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B4T3H1|MSRA_SALNS Peptide methionine sulfoxide reductase MsrA OS=Salmonella newport
(strain SL254) GN=msrA PE=3 SV=1
Length = 212
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMT 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5F3D4|MSRA_SALA4 Peptide methionine sulfoxide reductase MsrA OS=Salmonella agona
(strain SL483) GN=msrA PE=3 SV=1
Length = 212
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQAAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B7LMP0|MSRA_ESCF3 Peptide methionine sulfoxide reductase MsrA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGETGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQ---- 154
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S+ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDSAARASRERFQAAMI 162
Query: 155 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 188
+ VTT+I FY AE +HQ++ L +NP
Sbjct: 163 AANDDRPVTTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B5Z3H5|MSRA_ECO5E Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q8XCG3|MSRA_ECO57 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O157:H7 GN=msrA PE=3 SV=3
Length = 212
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q551H3|MSRA_DICDI Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum
GN=msrA PE=3 SV=1
Length = 147
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDH----AESVQVEYD 98
+ A FA G FW E +F + GV +T VGY G+ NP +R + AE+V++EYD
Sbjct: 1 MTKATFAAGCFWSVELLFQRVAGVTKTRVGYTNGTVENPTYRQVCSGKTGCAEAVELEYD 60
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P + + QLL +FW+ HD + QG DVG QYRS I+ + E+ A SKE+EQ+K K
Sbjct: 61 PEKVTYNQLLGLFWSKHDPTTLNRQGNDVGTQYRSGIYYHNEEQKNEAIASKEKEQLKYK 120
Query: 159 SSIVTTQIQQLVAFYPAEPEHQKF 182
I +T+I FYPAE EHQ++
Sbjct: 121 DPI-STEILPAGVFYPAETEHQQY 143
>sp|B7UQN3|MSRA_ECO27 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B1LRA3|MSRA_ECOSM Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNPF 189
++ +TT+I FY AE +HQ++ L +NP+
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNPY 196
>sp|A9N540|MSRA_SALPB Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL++FW +HD Q QG D G QYRS I+ E++ A S ER Q
Sbjct: 103 PAVISYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASCERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|Q57GH3|MSRA_SALCH Peptide methionine sulfoxide reductase MsrA OS=Salmonella
choleraesuis (strain SC-B67) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|Q8Z150|MSRA_SALTI Peptide methionine sulfoxide reductase MsrA OS=Salmonella typhi
GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5BKM8|MSRA_SALPK Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain AKU_12601) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|C0Q6H8|MSRA_SALPC Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
C (strain RKS4594) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|Q5PJ81|MSRA_SALPA Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B4TFF2|MSRA_SALHS Peptide methionine sulfoxide reductase MsrA OS=Salmonella
heidelberg (strain SL476) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5R9G7|MSRA_SALG2 Peptide methionine sulfoxide reductase MsrA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=msrA PE=3
SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5R0T7|MSRA_SALEP Peptide methionine sulfoxide reductase MsrA OS=Salmonella
enteritidis PT4 (strain P125109) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5FSB9|MSRA_SALDC Peptide methionine sulfoxide reductase MsrA OS=Salmonella dublin
(strain CT_02021853) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 159 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B6I2D2|MSRA_ECOSE Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SE11) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDQGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7NGF6|MSRA_ECOLU Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7MTA1|MSRA_ECO81 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O81
(strain ED1a) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7NUD2|MSRA_ECO7I Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q3YUC8|MSRA_SHISS Peptide methionine sulfoxide reductase MsrA OS=Shigella sonnei
(strain Ss046) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|P0A745|MSRA_SHIFL Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
GN=msrA PE=3 SV=2
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q0SXG5|MSRA_SHIF8 Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
serotype 5b (strain 8401) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|P0A744|MSRA_ECOLI Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12) GN=msrA PE=1 SV=2
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B1ISY2|MSRA_ECOLC Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|A8A7X5|MSRA_ECOHS Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O9:H4 (strain HS) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B1XDW8|MSRA_ECODH Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / DH10B) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|C4ZR95|MSRA_ECOBW Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7M9I1|MSRA_ECO8A Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O8
(strain IAI1) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7LCT1|MSRA_ECO55 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain 55989 / EAEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7MLN1|MSRA_ECO45 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|A7ZV98|MSRA_ECO24 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q31TF9|MSRA_SHIBS Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 4 (strain Sb227) GN=msrA PE=3 SV=1
Length = 212
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK 158
P VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 159 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 188
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|O26635|MSRA_METTH Peptide methionine sulfoxide reductase MsrA OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=msrA PE=3 SV=1
Length = 169
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 44 KAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEYDP 99
+ A F G FW E F ++GVV T VGY GG NP + + L HAE V+V +DP
Sbjct: 8 EKATFGAGCFWGVEDAFRKVDGVVSTRVGYMGGHLENPTYEDVCTGLTGHAEVVEVTFDP 67
Query: 100 RVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKER--EQMKS 157
V+ + LL+VFW+ HD + QGPDVG QYRS+IF + E+ R A S+ R E +
Sbjct: 68 DVVGYSDLLDVFWSIHDPTTLNRQGPDVGEQYRSVIFYHSDEQRRAAIESRRRLEESGRF 127
Query: 158 KSSIVTTQIQQLVAFYPAEPEHQKFELKRNP----FLIHLM 194
+ IVT I+ FY AE HQ++ L++NP +L+ L+
Sbjct: 128 RDRIVTA-IEPAGTFYEAEEYHQQY-LEKNPRRRCYLMRLL 166
>sp|Q8YXZ4|MSRA1_NOSS1 Peptide methionine sulfoxide reductase MsrA 1 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=msrA1 PE=3 SV=1
Length = 163
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEY 97
P++ A F G FW EA F + GVV T+VGY GG NP + + + HAE VQ+EY
Sbjct: 11 PMEKATFGAGCFWGVEAAFRKVKGVVSTSVGYMGGHFPNPCYLDVLSRITGHAEVVQIEY 70
Query: 98 DPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKS 157
DP+++++ LL VFW HD + QGPD G QYRS+IF + +++ A SK + Q+
Sbjct: 71 DPQLVSYEDLLAVFWDIHDPTTLNRQGPDKGEQYRSVIFFHNEQQAEAAQQSKAKVQVSG 130
Query: 158 KSSI-VTTQIQQLVAFYPAEPEHQKF 182
+ + + T+I+ +Y A EHQ++
Sbjct: 131 RFELDIVTEIKHKSEYYLATEEHQQY 156
>sp|A8G8X6|MSRA_SERP5 Peptide methionine sulfoxide reductase MsrA OS=Serratia
proteamaculans (strain 568) GN=msrA PE=3 SV=1
Length = 213
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 11/155 (7%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
L+ A+FA+G FW E +F GV T GY+GG NP +R + H E V+V +D
Sbjct: 44 LEVAIFAMGCFWGVERLFWQQQGVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFD 103
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKER-----E 153
P++I+++QLL+VFW +HD Q QG DVG QYRS I+T E+ A S +R E
Sbjct: 104 PKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQAME 163
Query: 154 QMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 188
Q K +I TT++ + FY AE +HQ++ L +NP
Sbjct: 164 QAGDKRAI-TTEVAPALPFYYAEDDHQQY-LYKNP 196
>sp|Q8TQV6|MSRA_METAC Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=msrA PE=3 SV=1
Length = 188
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 6/168 (3%)
Query: 32 STSINDELGRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----G 87
ST I + G L+ A FA G FW E F + GVV T VGY+GG P + +
Sbjct: 17 STDIFENPGEGLEKATFAAGCFWGIEEAFRQVKGVVATAVGYSGGHFEKPTYEQVCTLDT 76
Query: 88 DHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAA 147
HAE+V+V +DP+V++++ LL+VFW HD QGPDVG QYRS+IF + E+ A
Sbjct: 77 GHAEAVRVIFDPKVVSYKNLLDVFWKIHDPTTKNRQGPDVGKQYRSVIFYHNEEQKAAAL 136
Query: 148 HSKER-EQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHLM 194
SKE E+ + + T+I + FY AE HQ++ ++ FL +++
Sbjct: 137 ASKEELEKAGVFKNPIVTEIVPVSEFYMAEDYHQQY-FEKKGFLQNIL 183
>sp|Q6D151|MSRA_ERWCT Peptide methionine sulfoxide reductase MsrA OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=msrA PE=3 SV=1
Length = 212
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
+ A+FA+G FW +E +F G+ T GY GG NP +R + DHAE+V+V +D
Sbjct: 43 MSVAIFAMGCFWGAERLFWQQPGIYSTAAGYIGGYTPNPTYREVCSGQTDHAEAVRVVFD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQM--- 155
P I++ QLL++FW +HD Q QG D+G+QYRS I+T E+ + A S +R Q
Sbjct: 103 PATISYSQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYTLTPEQEQAAQASLQRFQQAMR 162
Query: 156 -KSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 188
S ++T+I+ FY AE +HQ++ L +NP
Sbjct: 163 ENSDGRAISTEIEPAGPFYYAEEDHQQY-LHKNP 195
>sp|C6DDM6|MSRA_PECCP Peptide methionine sulfoxide reductase MsrA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=msrA PE=3
SV=1
Length = 212
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 9/154 (5%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
+ A+FA+G FW E +F G+ T GY GG NP +R + DHAE+V+V +D
Sbjct: 43 MSVAIFAMGCFWGVERLFWQQPGIYSTAAGYIGGYTPNPTYREVCSGQTDHAEAVRVVFD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQ--MK 156
P VI++ QLL++FW +HD Q QG D+G+QYRS I+T E+ + A S +R Q M+
Sbjct: 103 PAVISYDQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYTLTPEQEQAAQESLQRFQQAMR 162
Query: 157 SKSSI--VTTQIQQLVAFYPAEPEHQKFELKRNP 188
K + ++T+I FY AE +HQ++ L +NP
Sbjct: 163 EKGDVRAISTEIVPAGPFYYAEDDHQQY-LYKNP 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,633,154
Number of Sequences: 539616
Number of extensions: 3438431
Number of successful extensions: 8142
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 7250
Number of HSP's gapped (non-prelim): 363
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)