Query 025993
Match_columns 245
No_of_seqs 189 out of 1209
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 03:06:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gwb_A Peptide methionine sulf 100.0 5.6E-70 1.9E-74 462.9 13.7 151 43-194 2-154 (168)
2 3bqh_A PILB, peptide methionin 100.0 9.4E-68 3.2E-72 457.7 13.8 151 43-195 2-156 (193)
3 1ff3_A Peptide methionine sulf 100.0 1.7E-67 5.7E-72 461.3 13.3 155 40-195 39-201 (211)
4 1fvg_A Peptide methionine sulf 100.0 1.1E-67 3.7E-72 459.0 11.7 152 40-192 40-198 (199)
5 3pim_A Peptide methionine sulf 100.0 2.4E-67 8E-72 453.1 9.5 152 39-192 15-178 (187)
6 1nwa_A Peptide methionine sulf 100.0 7.8E-67 2.7E-71 454.4 12.2 148 43-191 25-173 (203)
7 2j89_A Methionine sulfoxide re 100.0 5.1E-66 1.8E-70 461.6 12.0 151 37-189 88-242 (261)
8 3e0m_A Peptide methionine sulf 100.0 3E-64 1E-68 461.8 11.7 152 42-195 1-154 (313)
9 3dxs_X Copper-transporting ATP 95.4 0.012 4.2E-07 40.3 3.6 47 50-111 14-60 (74)
10 1p6t_A Potential copper-transp 94.8 0.024 8.3E-07 43.7 3.9 47 50-111 86-132 (151)
11 1cpz_A Protein (COPZ); copper 94.6 0.044 1.5E-06 35.7 4.3 47 49-110 11-57 (68)
12 1osd_A MERP, hypothetical prot 94.5 0.043 1.5E-06 36.3 4.1 47 50-111 15-61 (72)
13 2l3m_A Copper-ION-binding prot 94.1 0.036 1.2E-06 36.7 3.1 46 50-110 17-62 (71)
14 2g9o_A Copper-transporting ATP 94.0 0.031 1.1E-06 40.3 2.8 47 50-111 15-61 (90)
15 1opz_A Potential copper-transp 93.9 0.073 2.5E-06 35.3 4.4 48 49-111 17-64 (76)
16 2ldi_A Zinc-transporting ATPas 93.8 0.081 2.8E-06 34.3 4.4 46 50-110 15-60 (71)
17 1yjr_A Copper-transporting ATP 93.5 0.07 2.4E-06 35.5 3.7 46 50-110 16-61 (75)
18 1q8l_A Copper-transporting ATP 93.4 0.11 3.7E-06 36.3 4.8 47 50-111 21-67 (84)
19 1kvi_A Copper-transporting ATP 93.4 0.066 2.2E-06 36.4 3.5 47 50-111 20-66 (79)
20 2qif_A Copper chaperone COPZ; 93.4 0.062 2.1E-06 34.5 3.2 46 50-110 14-59 (69)
21 1y3j_A Copper-transporting ATP 93.2 0.066 2.3E-06 36.3 3.2 47 50-111 15-61 (77)
22 2ofg_X Zinc-transporting ATPas 93.2 0.092 3.1E-06 39.5 4.3 47 50-111 20-66 (111)
23 3cjk_B Copper-transporting ATP 93.2 0.084 2.9E-06 35.4 3.7 47 50-111 14-60 (75)
24 2ew9_A Copper-transporting ATP 93.2 0.037 1.3E-06 42.3 2.1 47 50-111 92-138 (149)
25 1aw0_A Menkes copper-transport 92.8 0.051 1.8E-06 35.9 2.1 47 50-111 15-61 (72)
26 2xmw_A PACS-N, cation-transpor 92.5 0.083 2.9E-06 34.6 2.9 45 50-110 15-59 (71)
27 4a4j_A Pacszia, cation-transpo 92.0 0.12 4.2E-06 34.4 3.3 46 50-111 14-59 (69)
28 2kt2_A Mercuric reductase; nme 91.9 0.13 4.6E-06 33.7 3.3 46 50-111 12-57 (69)
29 1yg0_A COP associated protein; 91.4 0.21 7.3E-06 32.1 3.9 45 50-110 13-57 (66)
30 1jww_A Potential copper-transp 90.6 0.19 6.6E-06 33.8 3.2 47 50-111 15-61 (80)
31 2rop_A Copper-transporting ATP 89.9 0.26 8.8E-06 40.4 3.9 47 50-111 134-180 (202)
32 2kkh_A Putative heavy metal tr 89.1 0.45 1.5E-05 34.0 4.2 47 50-111 28-74 (95)
33 1mwy_A ZNTA; open-faced beta-s 87.4 0.64 2.2E-05 30.9 4.0 44 50-110 15-58 (73)
34 1fvq_A Copper-transporting ATP 87.3 0.38 1.3E-05 31.5 2.7 45 50-110 14-58 (72)
35 2rop_A Copper-transporting ATP 86.8 0.64 2.2E-05 37.9 4.3 46 50-110 32-77 (202)
36 2ew9_A Copper-transporting ATP 83.8 0.74 2.5E-05 34.8 3.1 46 50-110 16-61 (149)
37 3j09_A COPA, copper-exporting 82.2 0.74 2.5E-05 45.9 3.2 49 50-113 14-62 (723)
38 3fry_A Probable copper-exporti 80.2 1.5 5.1E-05 29.7 3.3 43 49-111 16-58 (73)
39 2kwa_A Kinase A inhibitor; bac 76.7 0.99 3.4E-05 33.9 1.6 31 63-110 45-85 (101)
40 1cc8_A Protein (metallochapero 71.5 2.8 9.7E-05 28.0 2.8 45 49-111 15-60 (73)
41 3iwl_A Copper transport protei 70.8 2 7E-05 28.7 1.9 44 50-112 13-56 (68)
42 2phc_B Uncharacterized protein 69.3 4.9 0.00017 34.8 4.5 31 63-110 39-69 (225)
43 1ans_A Neurotoxin III; NMR {An 69.0 1.2 4.3E-05 26.3 0.4 7 50-56 9-15 (27)
44 1p6t_A Potential copper-transp 68.6 5 0.00017 30.3 4.0 46 50-110 18-63 (151)
45 2aj0_A Probable cadmium-transp 62.9 3.6 0.00012 26.9 1.9 35 50-99 15-49 (71)
46 2crl_A Copper chaperone for su 59.2 5.5 0.00019 29.0 2.5 45 49-111 29-73 (98)
47 2kyz_A Heavy metal binding pro 56.1 2.3 8E-05 27.6 -0.0 41 50-110 13-53 (67)
48 2k2p_A Uncharacterized protein 54.7 3.6 0.00012 29.2 0.8 43 50-110 34-76 (85)
49 3oep_A Putative uncharacterize 46.7 43 0.0015 32.3 7.1 62 63-147 33-94 (494)
50 3va7_A KLLA0E08119P; carboxyla 45.1 36 0.0012 36.2 6.9 59 63-141 877-938 (1236)
51 2roe_A Heavy metal binding pro 42.8 4 0.00014 26.3 -0.6 44 50-111 12-55 (66)
52 2xmm_A SSR2857 protein, ATX1; 40.8 3.6 0.00012 25.8 -1.0 27 50-76 13-39 (64)
53 1b4u_A LIGA, LIGB, protocatech 34.0 19 0.00066 29.2 2.1 44 201-245 27-70 (139)
54 1qup_A Superoxide dismutase 1 31.9 42 0.0014 28.4 4.0 46 49-112 16-61 (222)
55 3mml_B Allophanate hydrolase s 29.3 38 0.0013 29.3 3.3 67 62-147 53-121 (228)
56 2f40_A Hypothetical protein PF 23.2 44 0.0015 25.3 2.2 23 87-109 42-64 (96)
57 2bps_A YUKD protein; ubiquitin 22.9 41 0.0014 24.6 2.0 41 99-139 24-64 (81)
58 1xd7_A YWNA; structural genomi 21.3 24 0.00083 27.5 0.5 39 56-111 40-80 (145)
No 1
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-70 Score=462.94 Aligned_cols=151 Identities=36% Similarity=0.630 Sum_probs=142.3
Q ss_pred ccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHHhcCCCCcCCC
Q 025993 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFG 122 (245)
Q Consensus 43 ~~~a~fagGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff~~hdPt~~~r 122 (245)
.++|+||||||||+|++|++++||++|+|||+||+++||||+++|+|+|+|+|+|||++|||++||++||++||||+.||
T Consensus 2 te~A~fagGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~~hDPT~~nr 81 (168)
T 4gwb_A 2 TKRAVLAGGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQIHDPTTKDR 81 (168)
T ss_dssp CEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHHHSCTTSTTE
T ss_pred ceEEEEEccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHhhcCCcCcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhh-cCCCceEEEEeeCCCcccCchhhhhhhhhcCCcce-ecc
Q 025993 123 QGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMK-SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLI-HLM 194 (245)
Q Consensus 123 Qg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~-~~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k~P~~~-~~l 194 (245)
||+|+|+||||+|||+|++|+++|+++++++++. .+.++|+|+|+|+.+||+||+|||+| ++|||..+ |++
T Consensus 82 Qg~D~G~QYRS~If~~~~~Q~~~a~~~~~~l~~~~~~~~~IvTei~p~~~Fy~AE~yHQ~Y-l~knP~~y~Ch~ 154 (168)
T 4gwb_A 82 QGNDIGTSYRSAIYYVDDEQKRIAQETIADVEASGLWPGKVVTEVEPVRDFWEAEPEHQNY-LERYPNGYTCHF 154 (168)
T ss_dssp ETTEESGGGCEEEEESSHHHHHHHHHHHHHHHHHTCSSSCCCCEEEECCCEEECCGGGTTH-HHHSTTSCCCCC
T ss_pred CCCCCCcCceEEEecCCHHHHHHHHHHHHHHHHcccCCCCEEEEEEecCCeeECHHHHHHH-HHhCCCCCccCc
Confidence 9999999999999999999999999988876654 45679999999999999999999999 57999855 554
No 2
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=100.00 E-value=9.4e-68 Score=457.67 Aligned_cols=151 Identities=32% Similarity=0.525 Sum_probs=142.4
Q ss_pred ccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCcccc----CCceeEEEEEEcCCCCCHHHHHHHHHhcCCCC
Q 025993 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCR 118 (245)
Q Consensus 43 ~~~a~fagGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v----~gHaEaV~V~yDp~~isy~~LL~~Ff~~hdPt 118 (245)
+++|+||||||||+|+.|++++||++|+|||+||+++||||++| +||+|+|+|+|||++|||++||++||++||||
T Consensus 2 ~~~a~fagGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT 81 (193)
T 3bqh_A 2 TRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDPT 81 (193)
T ss_dssp EEEEEEEESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHHSCCB
T ss_pred ccEEEEecCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCCC
Confidence 68999999999999999999999999999999999999999999 49999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhhhhhhhhcCCcceeccC
Q 025993 119 QVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHLMG 195 (245)
Q Consensus 119 ~~~rQg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~~~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k~P~~~~~l~ 195 (245)
+.||||+|+|+||||+|||+|++|+++|+++++.++.. +.++|+|+|+|+.+||+||+|||+|| +|||..||++.
T Consensus 82 ~~nrQG~D~G~QYRS~If~~~~~Q~~~A~~~~~~~~~~-~~~~IvTeI~p~~~Fy~AE~yHQ~Yl-~knp~~Yc~~~ 156 (193)
T 3bqh_A 82 SLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQK-YQLPLVVENEPLKNFYDAEEYHQDYL-IKNPNGYCHID 156 (193)
T ss_dssp GGGSSSCCTTCTTCEEEEESSHHHHHHHHHHHHHHHTT-CSSCBCCEEEECCCEEECCGGGTTHH-HHCTTCCC---
T ss_pred CCCCCCCCcCccceeeeecCCHHHHHHHHHHHHHHHHH-hCCCeEEEEecCCCeeEcHHHHHHHH-HhCCCCceeee
Confidence 99999999999999999999999999999999888775 56799999999999999999999995 78999898875
No 3
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=100.00 E-value=1.7e-67 Score=461.30 Aligned_cols=155 Identities=42% Similarity=0.712 Sum_probs=144.7
Q ss_pred CCCccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccC----CceeEEEEEEcCCCCCHHHHHHHHHhcC
Q 025993 40 GRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTSH 115 (245)
Q Consensus 40 ~~~~~~a~fagGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~----gHaEaV~V~yDp~~isy~~LL~~Ff~~h 115 (245)
+.++++|+||||||||+|+.|++++||++|+|||+||+++||||++|| ||+|+|+|+|||++|||++||++||++|
T Consensus 39 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~h 118 (211)
T 1ff3_A 39 PDGMEIAIFAMGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENH 118 (211)
T ss_dssp CTTCEEEEEECSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHSS
T ss_pred CCCceEEEEecCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHhc
Confidence 457899999999999999999999999999999999999999999984 9999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhh----cCCCceEEEEeeCCCcccCchhhhhhhhhcCCcce
Q 025993 116 DCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMK----SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLI 191 (245)
Q Consensus 116 dPt~~~rQg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~----~~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k~P~~~ 191 (245)
|||+.||||+|+|+||||+|||+|++|+++|++++++.++. .+.++|+|+|+|+.+||+||+|||+| ++|||..|
T Consensus 119 DPT~~nrQG~D~GtQYRSaIf~~~~eQ~~~A~~~~~~~q~~l~~~g~~~~IvTeI~p~~~Fy~AE~YHQ~Y-l~knP~~Y 197 (211)
T 1ff3_A 119 DPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQY-LHKNPYGY 197 (211)
T ss_dssp CTTSSSEETTEESGGGCCEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEECCCCCEEECCGGGTTH-HHHSCCCC
T ss_pred CCcccCCCCCCcCccceeeeecCCHHHHHHHHHHHHHHHHHHhhcccCCceEEEEeeCCCceeChHHHHHH-HHHCCCCC
Confidence 99999999999999999999999999999999988766553 24568999999999999999999999 57899877
Q ss_pred eccC
Q 025993 192 HLMG 195 (245)
Q Consensus 192 ~~l~ 195 (245)
|.+.
T Consensus 198 c~~~ 201 (211)
T 1ff3_A 198 CGIG 201 (211)
T ss_dssp CCCC
T ss_pred cCcC
Confidence 7765
No 4
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=100.00 E-value=1.1e-67 Score=459.01 Aligned_cols=152 Identities=39% Similarity=0.627 Sum_probs=141.0
Q ss_pred CCCccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccC----CceeEEEEEEcCCCCCHHHHHHHHHhcC
Q 025993 40 GRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTSH 115 (245)
Q Consensus 40 ~~~~~~a~fagGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~----gHaEaV~V~yDp~~isy~~LL~~Ff~~h 115 (245)
+.++++|+||||||||+|+.|++++||++|+|||+||+++||||++|| ||+|+|+|+|||++|||++||++||++|
T Consensus 40 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~~h 119 (199)
T 1fvg_A 40 PEGTQMAVFGMGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWENH 119 (199)
T ss_dssp CTTCEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHTS
T ss_pred CCCceEEEEecCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhc
Confidence 457899999999999999999999999999999999999999999994 9999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhhc---CCCceEEEEeeCCCcccCchhhhhhhhhcCCccee
Q 025993 116 DCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKS---KSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIH 192 (245)
Q Consensus 116 dPt~~~rQg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~~---~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k~P~~~~ 192 (245)
|||+.||||+|+|+||||+|||+|++|+++|++++++.+++. ..++|+|+|+|+.+||+||+|||+|| +|||..||
T Consensus 120 DPT~~nrQG~D~G~QYRS~If~~~~~Q~~~A~~~~~~~q~~~~~~g~~~IvTeI~p~~~Fy~AE~yHQ~Yl-~knP~~Yc 198 (199)
T 1fvg_A 120 DPTQGMRQGNDHGSQYRSAIYPTSAEHVGAALKSKEDYQKVLSEHGFGLITTDIREGQTFYYAEDYHQQYL-SKDPDGYC 198 (199)
T ss_dssp CTTCSSEETTEESGGGCEEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCEECSSCCCEECCGGGTTHH-HHSTTCCC
T ss_pred CCcccCCCCCCCChhheeccccCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeeCCCeeECHHHHHHHH-HhCCCCCC
Confidence 999999999999999999999999999999999887666531 12589999999999999999999995 78997554
No 5
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=100.00 E-value=2.4e-67 Score=453.10 Aligned_cols=152 Identities=36% Similarity=0.553 Sum_probs=133.7
Q ss_pred CCCCccEEEEcCCcccchhhhhccC--CCeEEeeeeecCC--CCCC----CCccccC----CceeEEEEEEcCCCCCHHH
Q 025993 39 LGRPLKAAVFALGSFWRSEAVFGCL--NGVVRTTVGYAGG--SKTN----PEFRNLG----DHAESVQVEYDPRVINFRQ 106 (245)
Q Consensus 39 ~~~~~~~a~fagGCFWg~Ea~F~~l--~GV~~t~vGYaGG--~~~~----PtY~~v~----gHaEaV~V~yDp~~isy~~ 106 (245)
.+.++++|+||||||||+|++|+++ +||++|+|||+|| +++| |||++|| ||+|+|+|+|||++|||++
T Consensus 15 ~p~~~~~a~fagGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~ 94 (187)
T 3pim_A 15 DPAKDKLITLACGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRE 94 (187)
T ss_dssp CTTTCEEEEEESSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHH
T ss_pred CCCCCcEEEEecCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHH
Confidence 4467899999999999999999999 9999999999999 9999 9999995 8999999999999999999
Q ss_pred HHHHHHhcCCCCcCCCCCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhhhhhhhhc
Q 025993 107 LLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKR 186 (245)
Q Consensus 107 LL~~Ff~~hdPt~~~rQg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~~~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k 186 (245)
||++||++||||+.||||+|+|+||||+|||+|++|+++|++++++++.+ +.++|+|+|+|+.+||+||||||+| ++|
T Consensus 95 LL~~Ff~~hDPT~~nrQG~D~G~QYRS~Ify~~~~Q~~~A~~~~~~l~~~-~~~~IvTeI~p~~~Fy~AE~yHQ~Y-l~k 172 (187)
T 3pim_A 95 LTDFFFRIHDPTTSNSQGPDKGTQYRSGLFAHSDADLKELAKIKEEWQPK-WGNKIATVIEPIKNFYDAEEYHQLY-LDK 172 (187)
T ss_dssp HHHHHTTSSCCBTTCC-----CGGGCCEEEESSHHHHHHHHHHHHHHGGG-GTTCBCCEEEEEEEEEEHHHHHHHH-CTT
T ss_pred HHHHHHHhcCCCcCCCCCCCcCcccceeeEeCCHHHHHHHHHHHHHHHHH-hCCCcEEEEeeCCCeeecHHHHHHH-HHH
Confidence 99999999999999999999999999999999999999999999888865 4679999999999999999999999 478
Q ss_pred CCccee
Q 025993 187 NPFLIH 192 (245)
Q Consensus 187 ~P~~~~ 192 (245)
||..||
T Consensus 173 nP~~Yc 178 (187)
T 3pim_A 173 NPQGYA 178 (187)
T ss_dssp CTTCTT
T ss_pred CCCCCC
Confidence 997554
No 6
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=100.00 E-value=7.8e-67 Score=454.36 Aligned_cols=148 Identities=36% Similarity=0.584 Sum_probs=140.1
Q ss_pred ccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHHhcCCCCcCCC
Q 025993 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFG 122 (245)
Q Consensus 43 ~~~a~fagGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff~~hdPt~~~r 122 (245)
+++|+||||||||+|++|++++||++|+|||+||.++||||++.+.|+|+|+|+|||++|||++||++||++||||+.||
T Consensus 25 ~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~~hDPT~~nr 104 (203)
T 1nwa_A 25 NQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKDR 104 (203)
T ss_dssp CEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHHHSCTTSTTE
T ss_pred cceEEEecCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHHhcCCcccCC
Confidence 68899999999999999999999999999999999999999994459999999999999999999999999999999999
Q ss_pred CCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhh-cCCCceEEEEeeCCCcccCchhhhhhhhhcCCcce
Q 025993 123 QGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMK-SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLI 191 (245)
Q Consensus 123 Qg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~-~~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k~P~~~ 191 (245)
||+|+|+||||+|||+|++|+++|++++++++++ .+.++|+|+|+|+.+||+||+|||+|| +|||..|
T Consensus 105 QG~D~GtQYRSaIfy~~~eQ~~~A~~~~~~lq~~g~~~~~IvTeI~p~~~Fy~AE~YHQ~Yl-~knP~~Y 173 (203)
T 1nwa_A 105 QGNDRGTSYRSAIFYFDEQQKRIALDTIADVEASGLWPGKVVTEVSPAGDFWEAEPEHQDYL-QRYPNGY 173 (203)
T ss_dssp ETTEESGGGCEEEEESSHHHHHHHHHHHHHHHHHCCSSSCCCCEEEECCCEEECCGGGTTHH-HHSTTSC
T ss_pred CCCCCCccccccccCCCHHHHHHHHHHHHHHHHhcCcCCCeEEEEecCCCEEEChHHHHHHH-HhCCCCC
Confidence 9999999999999999999999999999887775 356799999999999999999999995 7899866
No 7
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=100.00 E-value=5.1e-66 Score=461.64 Aligned_cols=151 Identities=36% Similarity=0.577 Sum_probs=143.0
Q ss_pred cCCCCCccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccC----CceeEEEEEEcCCCCCHHHHHHHHH
Q 025993 37 DELGRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFW 112 (245)
Q Consensus 37 ~~~~~~~~~a~fagGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~----gHaEaV~V~yDp~~isy~~LL~~Ff 112 (245)
+.|..++++|+||||||||+|+.|++++||++|+|||+||.++||||++|| ||+|+|+|+|||++|||++||++||
T Consensus 88 ~~p~~~~e~a~fAgGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 88 DLPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp CCCSTTCEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CCCCCCCeEEEEecCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 334468999999999999999999999999999999999999999999995 9999999999999999999999999
Q ss_pred hcCCCCcCCCCCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhhhhhhhhcCCc
Q 025993 113 TSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPF 189 (245)
Q Consensus 113 ~~hdPt~~~rQg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~~~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k~P~ 189 (245)
++||||+.||||+|+|+||||+|||+|++|+++|++++++.+++ +.++|+|||+|+.+||+||||||+|| +|||.
T Consensus 168 ~~hDPT~~nrQG~D~GtQYRSaIfy~~eeQ~~~Ae~s~~~~q~~-~~~~IvTEI~p~~~Fy~AEdYHQ~Yl-~Kn~~ 242 (261)
T 2j89_A 168 ARHDPTTLNRQGNDVGTQYRSGIYYYTPEQEKAAKESLERQQKL-LNRKIVTEILPAKKFYRAEEYHQQYL-AKGGR 242 (261)
T ss_dssp HHSCTTSTTEETTEESGGGCEEEEESSHHHHHHHHHHHHHHHTT-CSSCCCCEEEECCCEEECCGGGTTTT-TTTTT
T ss_pred HhcCCcccCCCCCCCCccccccccCCCHHHHHHHHHHHHHHHHh-cCCCcEEEEecCCCeeECHHHHHHHH-HHCCC
Confidence 99999999999999999999999999999999999999888875 45799999999999999999999995 68997
No 8
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=100.00 E-value=3e-64 Score=461.81 Aligned_cols=152 Identities=28% Similarity=0.461 Sum_probs=145.0
Q ss_pred CccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCcccc--CCceeEEEEEEcCCCCCHHHHHHHHHhcCCCCc
Q 025993 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQ 119 (245)
Q Consensus 42 ~~~~a~fagGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v--~gHaEaV~V~yDp~~isy~~LL~~Ff~~hdPt~ 119 (245)
+|++|+||||||||+|++|++++||++|+|||+||+++||||++| +||+|+|+|+|||++|||++||++||++||||+
T Consensus 1 ~~~~a~fagGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT~ 80 (313)
T 3e0m_A 1 HMAEIYLAGGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRVIDPLS 80 (313)
T ss_dssp -CEEEEEECSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHHHSCTTC
T ss_pred CccEEEEecCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHhhcCCCc
Confidence 378999999999999999999999999999999999999999999 599999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhhhhhhhhcCCcceeccC
Q 025993 120 VFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHLMG 195 (245)
Q Consensus 120 ~~rQg~d~G~QYRSaIf~~~e~q~~~A~~~~~~~~~~~~~~~i~TeI~p~~~Fy~AEeyHQ~Y~l~k~P~~~~~l~ 195 (245)
.||||+|+|+||||+|||+|++|+++|++++++++.. +.+||+|+|+|+.+||+||+|||+|| +|||..||++.
T Consensus 81 ~nrQG~D~G~QYRS~Ify~~~~Q~~~a~~~~~~~~~~-~~~~IvTeI~p~~~Fy~AE~yHQ~Yl-~knP~~Yc~~~ 154 (313)
T 3e0m_A 81 INQQGNDRGRQYRTGIYYQDEADLPAIYTVVQEQERM-LGRKIAVEVEQLRHYILAEDYHQDYL-RKNPSGYCHID 154 (313)
T ss_dssp SSEETTEESGGGCCEEEESCGGGHHHHHHHHHHHHHH-HSSCCCCEEEECCCEEECCGGGTTHH-HHSTTCCCCSC
T ss_pred CCCcCCCCccccceeEecCCHHHHHHHHHHHHHHHHh-cCCCeEEEEeeccceeEcHHHHHHHH-HHCCCcceeee
Confidence 9999999999999999999999999999998888765 45799999999999999999999995 78999999887
No 9
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=95.43 E-value=0.012 Score=40.27 Aligned_cols=47 Identities=21% Similarity=0.315 Sum_probs=40.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
++|-|.+|..+.+++||.++.+-+.. ..+.|+||+..++.++|.+..
T Consensus 14 ~~C~~~ie~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 60 (74)
T 3dxs_X 14 AACSNSVEAALMNVNGVFKASVALLQ---------------NRADVVFDPNLVKEEDIKEEI 60 (74)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEGGG---------------TEEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEEEecC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 46889999999999999999998774 457799999999999998774
No 10
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=94.78 E-value=0.024 Score=43.67 Aligned_cols=47 Identities=30% Similarity=0.422 Sum_probs=41.3
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-|.+|..+.+++||.++.+-++. +.+.|+|||..++.++|++..
T Consensus 86 ~~C~~~ie~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 132 (151)
T 1p6t_A 86 AACANRIEKRLNKIEGVANAPVNFAL---------------ETVTVEYNPKEASVSDLKEAV 132 (151)
T ss_dssp SSHHHHHHHHHTTSSSEEECCEETTT---------------TEEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEccC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999999998774 457799999999999998865
No 11
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=94.57 E-value=0.044 Score=35.70 Aligned_cols=47 Identities=17% Similarity=0.247 Sum_probs=39.9
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 49 agGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
-.+|-+.+|..+.+++||.++.+-+..| .+.|.|||..++.++|.+.
T Consensus 11 C~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 57 (68)
T 1cpz_A 11 CNHCVARIEEAVGRISGVKKVKVQLKKE---------------KAVVKFDEANVQATEICQA 57 (68)
T ss_dssp SSSHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 3589999999999999999999887754 4678999999998888775
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=94.46 E-value=0.043 Score=36.30 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=40.0
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1osd_A 15 SACPITVKKAISKVEGVSKVDVTFETR---------------QAVVTFDDAKTSVQKLTKAT 61 (72)
T ss_dssp TTHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEETTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 589999999999999999999887643 56789999999988888753
No 13
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=94.07 E-value=0.036 Score=36.66 Aligned_cols=46 Identities=28% Similarity=0.370 Sum_probs=38.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-+.+|..+..++||.++.+-+..| .+.|.|||..++.++|.+.
T Consensus 17 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 62 (71)
T 2l3m_A 17 GHCVNAIESSVKELNGVEQVKVQLAEG---------------TVEVTIDSSVVTLKDIVAV 62 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 368888999999999999999887754 4678999999998888775
No 14
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=94.02 E-value=0.031 Score=40.32 Aligned_cols=47 Identities=17% Similarity=0.170 Sum_probs=40.2
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
++|-|.+|..+..++||.++.+-+.. ..+.|.|||..++.++|.+..
T Consensus 15 ~~C~~~Ie~~L~~~~GV~~v~v~l~~---------------~~~~V~~~~~~~~~~~i~~~i 61 (90)
T 2g9o_A 15 KSCVSNIESTLSALQYVSSIVVSLEN---------------RSAIVVYNASSVTPESLRKAI 61 (90)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEETTT---------------TEEEEEECCSSCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 37899999999999999999998774 457789999999988888763
No 15
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=93.94 E-value=0.073 Score=35.27 Aligned_cols=48 Identities=27% Similarity=0.291 Sum_probs=39.7
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 49 agGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
..+|-+.+|..+..++||.++.+.+.. ..+.|.|||..++.++|.+..
T Consensus 17 C~~C~~~i~~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 64 (76)
T 1opz_A 17 CAACAARIEKGLKRMPGVTDANVNLAT---------------ETVNVIYDPAETGTAAIQEKI 64 (76)
T ss_dssp STTHHHHHHHHHHTSTTEEEEEEEGGG---------------TEEEEEECTTTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCeEEEEEEecC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 357889999999999999999988764 346689999999988887653
No 16
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=93.84 E-value=0.081 Score=34.34 Aligned_cols=46 Identities=26% Similarity=0.343 Sum_probs=38.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-+.+|..+..++||.+..+-+..+ .+.|.||+..++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 60 (71)
T 2ldi_A 15 AACASSIERALERLKGVAEASVTVATG---------------RLTVTYDPKQVSEITIQER 60 (71)
T ss_dssp SGGGHHHHTGGGGCSSEEEEEEETTTT---------------EEEEEECTTTCCTHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 578999999999999999998877654 4668899988888887764
No 17
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=93.48 E-value=0.07 Score=35.50 Aligned_cols=46 Identities=20% Similarity=0.418 Sum_probs=38.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 16 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 61 (75)
T 1yjr_A 16 ASCVHKIESSLTKHRGILYCSVALATN---------------KAHIKYDPEIIGPRDIIHT 61 (75)
T ss_dssp TTHHHHHHHHHTTSTTEEEEEEETTTT---------------EEEEEECTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 578999999999999999999877643 5678999998888877765
No 18
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=93.44 E-value=0.11 Score=36.34 Aligned_cols=47 Identities=21% Similarity=0.356 Sum_probs=39.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-+.+|..+..++||.++.+-+.. ..+.|.|||..++.++|.+..
T Consensus 21 ~~C~~~ie~~l~~~~GV~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 67 (84)
T 1q8l_A 21 HSCTSTIEGKIGKLQGVQRIKVSLDN---------------QEATIVYQPHLISVEEMKKQI 67 (84)
T ss_dssp CSSCHHHHHHHHTCTTEEEEEECSTT---------------TEEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999999987664 457789999999988888764
No 19
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=93.42 E-value=0.066 Score=36.45 Aligned_cols=47 Identities=26% Similarity=0.462 Sum_probs=39.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-|.+|..+..++||.++.+-+.. ..+.|.|||..++-++|.+..
T Consensus 20 ~~C~~~i~~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 66 (79)
T 1kvi_A 20 NSCVWTIEQQIGKVNGVHHIKVSLEE---------------KNATIIYDPKLQTPKTLQEAI 66 (79)
T ss_dssp TTTHHHHHHHHHHSSSCCCEEEEGGG---------------TEEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999998887764 457789999999988887754
No 20
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=93.41 E-value=0.062 Score=34.49 Aligned_cols=46 Identities=22% Similarity=0.381 Sum_probs=38.2
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-+.+|..+..++||.++.+.+..+ .+.|.|||..++-++|.+.
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 59 (69)
T 2qif_A 14 QHCVKAVETSVGELDGVSAVHVNLEAG---------------KVDVSFDADKVSVKDIADA 59 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 468899999999999999998877643 4668999999998887764
No 21
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=93.22 E-value=0.066 Score=36.34 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=39.2
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (77)
T 1y3j_A 15 ASCVANIERNLRREEGIYSILVALMAG---------------KAEVRYNPAVIQPPMIAEFI 61 (77)
T ss_dssp CSHHHHHHHHHTTSSSEEECCCBTTTT---------------BEEEEECTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999988876643 46689999999988887753
No 22
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=93.20 E-value=0.092 Score=39.47 Aligned_cols=47 Identities=23% Similarity=0.321 Sum_probs=40.6
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-|.+|..+..++||.++.+-+.. ..+.|.|||..++.++|.+..
T Consensus 20 ~~Ca~~Ie~~L~~~~GV~~v~v~~~~---------------~~~~V~~~~~~~~~~~i~~~i 66 (111)
T 2ofg_X 20 TSCKLKIEGSLERLKGVAEASVTVAT---------------GRLTVTYDPKQVSEITIQERI 66 (111)
T ss_dssp GGTHHHHHHHHTTSSSEEEEEEETTT---------------TEEEEEECTTTCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEECCC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999998775 357789999999998888764
No 23
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=93.20 E-value=0.084 Score=35.41 Aligned_cols=47 Identities=26% Similarity=0.446 Sum_probs=39.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 60 (75)
T 3cjk_B 14 NSCVWTIEQQIGKVNGVHHIKVSLEEK---------------NATIIYDPKLQTPKTLQEAI 60 (75)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 468999999999999999999887753 56789999999988888764
No 24
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=93.15 E-value=0.037 Score=42.30 Aligned_cols=47 Identities=21% Similarity=0.412 Sum_probs=40.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
++|-|.+|..+.+++||.++.+-+.. +.+.|.|||..++.++|++..
T Consensus 92 ~~C~~~ie~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 138 (149)
T 2ew9_A 92 ASCVHNIESKLTRTNGITYASVALAT---------------SKALVKFDPEIIGPRDIIKII 138 (149)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEETTT---------------TEEEEECCTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcCC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 37889999999999999999998774 457789999999999988764
No 25
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=92.80 E-value=0.051 Score=35.89 Aligned_cols=47 Identities=26% Similarity=0.240 Sum_probs=39.2
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1aw0_A 15 NSCVQSIEGVISKKPGVKSIRVSLANS---------------NGTVEYDPLLTSPETLRGAI 61 (72)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCCcCCHHHHHHHH
Confidence 468999999999999999998887643 56789999989988887753
No 26
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=92.53 E-value=0.083 Score=34.61 Aligned_cols=45 Identities=18% Similarity=0.143 Sum_probs=35.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.||+. ++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~-~~~~~i~~~ 59 (71)
T 2xmw_A 15 AACASSIERAIAKVPGVQSCQVNFALE---------------QAVVSYHGE-TTPQILTDA 59 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEC----CHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCC-CCHHHHHHH
Confidence 468999999999999999999887753 466899987 888888775
No 27
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=92.04 E-value=0.12 Score=34.45 Aligned_cols=46 Identities=17% Similarity=0.116 Sum_probs=39.0
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-|-+|..+.+++||.++.+-+..+ .+.|.| +..++.++|.+..
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~-~~~~~~~~i~~~i 59 (69)
T 4a4j_A 14 TSCASSIERAIAKVPGVQSCQVNFALE---------------QAVVSY-HGETTPQILTDAV 59 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEE-CTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEE-CCCCCHHHHHHHH
Confidence 478899999999999999999987743 567899 7889999998765
No 28
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=91.85 E-value=0.13 Score=33.67 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=37.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
++|-+.+|..+..++||.++.+-+..+ .+.|.||+. ++.++|.+..
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~-~~~~~i~~~i 57 (69)
T 2kt2_A 12 DSCAAHVKEALEKVPGVQSALVSYPKG---------------TAQLAIVPG-TSPDALTAAV 57 (69)
T ss_dssp THHHHHHHHHHHHSTTEEEEEEETTTT---------------EEEEEECTT-SCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccCC---------------EEEEEECCC-CCHHHHHHHH
Confidence 478999999999999999999887754 466889987 6888877763
No 29
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=91.43 E-value=0.21 Score=32.07 Aligned_cols=45 Identities=24% Similarity=0.215 Sum_probs=36.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-|.+|..+..++||.+..+-+..+ .+.|.|||.. +.++|.+.
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~-~~~~i~~~ 57 (66)
T 1yg0_A 13 NHCVDKIEKFVGEIEGVSFIDVSVEKK---------------SVVVEFDAPA-TQDLIKEA 57 (66)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEETTTT---------------EEEEEECTTC-CHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEcCCC---------------EEEEEECCCC-CHHHHHHH
Confidence 579999999999999999998877644 4668999875 77777665
No 30
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=90.64 E-value=0.19 Score=33.80 Aligned_cols=47 Identities=30% Similarity=0.422 Sum_probs=38.2
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-+.+|..+..++||.++.+-+.. ..+.|.|||..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 61 (80)
T 1jww_A 15 AACANRIEKRLNKIEGVANAPVNFAL---------------ETVTVEYNPKEASVSDLKEAV 61 (80)
T ss_dssp HHHHHHHHHHHHTSTTEEECCCCSSS---------------SEEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 46888899999999999988876654 456789999989988887753
No 31
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=89.94 E-value=0.26 Score=40.38 Aligned_cols=47 Identities=26% Similarity=0.359 Sum_probs=40.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
++|-|.+|..+.+++||.++.+-+.. +.+.|.|||..++.++|++..
T Consensus 134 ~~C~~~ie~~l~~~~GV~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 180 (202)
T 2rop_A 134 ASCVHSIEGMISQLEGVQQISVSLAE---------------GTATVLYNPAVISPEELRAAI 180 (202)
T ss_dssp THHHHHHHHHGGGSSSEEEEEEETTT---------------TEEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEccC---------------CEEEEEECCCCCCHHHHHHHH
Confidence 47889999999999999999998774 457789999999999888764
No 32
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=89.06 E-value=0.45 Score=34.01 Aligned_cols=47 Identities=21% Similarity=0.159 Sum_probs=39.0
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.||+..++-++|.+..
T Consensus 28 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 74 (95)
T 2kkh_A 28 TSEVPIIENILKSLDGVKEYSVIVPSR---------------TVIVVHDSLLISPFQIAKAL 74 (95)
T ss_dssp TTTHHHHHHHHHHSSSEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 478899999999999999999877643 46689999988888887753
No 33
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=87.45 E-value=0.64 Score=30.88 Aligned_cols=44 Identities=20% Similarity=0.139 Sum_probs=34.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
++|-|.+|..+..++||.++.+-+..+ .+.|.||+. ..++|.+.
T Consensus 15 ~~C~~~ie~~l~~~~gV~~~~v~~~~~---------------~~~v~~~~~--~~~~i~~~ 58 (73)
T 1mwy_A 15 AACARKVENAVRQLAGVNQVQVLFATE---------------KLVVDADND--IRAQVESA 58 (73)
T ss_dssp TTHHHHHHHHHHTSSSEEEEEEETTTT---------------EEEEEESSC--CHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCC--CHHHHHHH
Confidence 579999999999999999999887754 466889985 35556554
No 34
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=87.33 E-value=0.38 Score=31.49 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=36.6
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|| ..++.++|.+.
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~-~~~~~~~i~~~ 58 (72)
T 1fvq_A 14 SACTNTINTQLRALKGVTKCDISLVTN---------------ECQVTYD-NEVTADSIKEI 58 (72)
T ss_dssp HHHHHHHHHHHHTSSSEEEECCBTTTT---------------EEEEEEC-TTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEEC-CCCCHHHHHHH
Confidence 468899999999999999988876643 4668899 77888887775
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=86.79 E-value=0.64 Score=37.94 Aligned_cols=46 Identities=26% Similarity=0.313 Sum_probs=39.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
++|-|.+|..+..++||.++.+-+.. ..+.|.||+..++.++|.+.
T Consensus 32 ~~C~~~ie~~l~~~~GV~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~ 77 (202)
T 2rop_A 32 KSCVLNIEENIGQLLGVQSIQVSLEN---------------KTAQVKYDPSCTSPVALQRA 77 (202)
T ss_dssp STHHHHHHHHTTSBTTEEEEEEETTT---------------TEEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecC---------------CEEEEEECCCCCCHHHHHHH
Confidence 57889999999999999999988774 35678999999998887775
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=83.84 E-value=0.74 Score=34.82 Aligned_cols=46 Identities=20% Similarity=0.274 Sum_probs=38.0
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
+||-|.+|..+..++||.+..+-+.. ..+.|.|||..++.++|.+.
T Consensus 16 ~~C~~~ie~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~ 61 (149)
T 2ew9_A 16 ASCVSNIERNLQKEAGVLSVLVALMA---------------GKAEIKYDPEVIQPLEIAQF 61 (149)
T ss_dssp SSHHHHHHHHHHTTSSCCCEEEETTT---------------TEEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecC---------------CEEEEEEcCCCCCHHHHHHH
Confidence 58889999999999999988887664 34668899998888877665
No 37
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=82.23 E-value=0.74 Score=45.87 Aligned_cols=49 Identities=24% Similarity=0.344 Sum_probs=42.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHHh
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff~ 113 (245)
++|-|.+|+.+.+++||.++++-++. +.+.|+|||..++.++|.+..=.
T Consensus 14 a~Ca~~Ie~~L~~~~GV~~v~Vnl~~---------------~~~~V~~d~~~~~~~~i~~ai~~ 62 (723)
T 3j09_A 14 AMCVKSIETAVGSLEGVEEVRVNLAT---------------ETAFIRFDEKRIDFETIKRVIED 62 (723)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTT---------------TEEEEEECTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCceEEEEEcCC---------------CEEEEEeCCCcCCHHHHHHHHHh
Confidence 57899999999999999999998874 46779999999999999987644
No 38
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=80.18 E-value=1.5 Score=29.74 Aligned_cols=43 Identities=9% Similarity=0.084 Sum_probs=34.7
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 49 agGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
-++|-+-+|..+.+ +||.++.+-+. ...+.|+|| +.++|.+..
T Consensus 16 C~~C~~~ie~~l~~-~gv~~~~v~~~---------------~~~~~v~~~----~~~~i~~~i 58 (73)
T 3fry_A 16 CHHCVARVKKALEE-AGAKVEKVDLN---------------EAVVAGNKE----DVDKYIKAV 58 (73)
T ss_dssp CGGGHHHHHHHHHH-TTCEEEEECSS---------------EEEEEEEGG----GHHHHHHHH
T ss_pred CHHHHHHHHHHhcc-CCcEEEEEEcc---------------CCEEEEEEC----CHHHHHHHH
Confidence 35788999999999 99999998765 466789998 677777654
No 39
>2kwa_A Kinase A inhibitor; bacterial signal transduction, KIPI, histidine kinase inhibi bacillus subtilis, transferase inhibitor; NMR {Bacillus subtilis}
Probab=76.67 E-value=0.99 Score=33.92 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=26.3
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCC----------CHHHHHHH
Q 025993 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVI----------NFRQLLEV 110 (245)
Q Consensus 63 l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~i----------sy~~LL~~ 110 (245)
++||++++.||. +|.|.|||..+ +++.|...
T Consensus 45 ~~Gv~EiVPa~~-----------------SllV~ydp~~i~~~~~~~~~~~~~~l~~~ 85 (101)
T 2kwa_A 45 FPGFIECIPAFT-----------------SLTVFYDMYEVYKHLPQGISSPFESVKRD 85 (101)
T ss_dssp CTTEEEEEECSS-----------------EEEEEECHHHHHTTCCTTCCSHHHHHHHH
T ss_pred CCCeEEeccCce-----------------EEEEEEcchHhcccccccccCCHHHHHHH
Confidence 699999999987 68899999988 77776654
No 40
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=71.50 E-value=2.8 Score=28.05 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=34.6
Q ss_pred cCCcccchhhhhccCC-CeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 49 ALGSFWRSEAVFGCLN-GVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 49 agGCFWg~Ea~F~~l~-GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
-++|-+.+|..+.+++ ||.++.+-+..+ .+.|.++ ++.++|.+..
T Consensus 15 C~~C~~~ie~~l~~~~~GV~~~~v~~~~~---------------~~~v~~~---~~~~~i~~~i 60 (73)
T 1cc8_A 15 CSGCSGAVNKVLTKLEPDVSKIDISLEKQ---------------LVDVYTT---LPYDFILEKI 60 (73)
T ss_dssp SHHHHHHHHHHHHTTTTSEEEEEEETTTT---------------EEEEEES---SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCceEEEEECCCC---------------EEEEEEe---CCHHHHHHHH
Confidence 4689999999999999 999999988754 3445563 5777777653
No 41
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=70.81 E-value=2 Score=28.68 Aligned_cols=44 Identities=20% Similarity=0.228 Sum_probs=34.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff 112 (245)
++|-+.+|..+.+++|| ++.+-+..+ .+.|+++ ++.++|++..=
T Consensus 13 ~~C~~~i~~~l~~~~gV-~v~v~~~~~---------------~~~v~~~---~~~~~i~~~i~ 56 (68)
T 3iwl_A 13 GGCAEAVSRVLNKLGGV-KYDIDLPNK---------------KVCIESE---HSMDTLLATLK 56 (68)
T ss_dssp HHHHHHHHHHHHHHCSE-EEEEETTTT---------------EEEEEES---SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCe-EEEEEcCCC---------------EEEEEec---CCHHHHHHHHH
Confidence 36788899999999999 999988754 4556663 57788887653
No 42
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=69.29 E-value=4.9 Score=34.83 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=27.4
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 63 l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
++||+++..||. +|.|.|||.++++.+|++.
T Consensus 39 ~~gv~e~vP~~~-----------------sl~V~~dp~~~~~~~l~~~ 69 (225)
T 2phc_B 39 PEWLVELVPAYS-----------------SLLVIYDPLKASYEEVESY 69 (225)
T ss_dssp CTTEEEEEEETT-----------------EEEEEECTTTSCHHHHHHH
T ss_pred CCCeEEeeccce-----------------EEEEEEcCCcCCHHHHHHH
Confidence 799999999987 6889999999999887764
No 43
>1ans_A Neurotoxin III; NMR {Anemonia sulcata} SCOP: g.11.1.1
Probab=69.04 E-value=1.2 Score=26.33 Aligned_cols=7 Identities=29% Similarity=0.567 Sum_probs=6.1
Q ss_pred CCcccch
Q 025993 50 LGSFWRS 56 (245)
Q Consensus 50 gGCFWg~ 56 (245)
+|||||-
T Consensus 9 ~gCpWGQ 15 (27)
T 1ans_A 9 GGCPWGQ 15 (27)
T ss_dssp TTCSSSC
T ss_pred cCCcccc
Confidence 8999984
No 44
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=68.65 E-value=5 Score=30.29 Aligned_cols=46 Identities=26% Similarity=0.261 Sum_probs=37.0
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.||-+.+|..+..++||.+..+.+..+ .+.|.|||..++..++.+.
T Consensus 18 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 63 (151)
T 1p6t_A 18 AACAARIEKGLKRMPGVTDANVNLATE---------------TVNVIYDPAETGTAAIQEK 63 (151)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEEGGGT---------------EEEEEECTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC---------------EEEEEEcCCcCCHHHHHHH
Confidence 478888999999999999988877643 4557899988888777654
No 45
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=62.91 E-value=3.6 Score=26.94 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=28.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcC
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDP 99 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp 99 (245)
.+|-+.+|..+..++||.++.+-+.. ..+.|.+|+
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~ 49 (71)
T 2aj0_A 15 TNCAAKFERNVKEIEGVTEAIVNFGA---------------SKITVTGEA 49 (71)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEECCSS---------------EEEEEEESC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECCC---------------CEEEEEecC
Confidence 36889999999999999999887664 456677887
No 46
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.23 E-value=5.5 Score=29.02 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=35.0
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 49 agGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
-.+|-|.+|..+..++||.++.+-+..+ .+.|.|+ ++-++|++..
T Consensus 29 C~~C~~~Ie~aL~~l~GV~~v~vdl~~~---------------~~~V~~~---~~~~~i~~~i 73 (98)
T 2crl_A 29 CQSCVDAVRKSLQGVAGVQDVEVHLEDQ---------------MVLVHTT---LPSQEVQALL 73 (98)
T ss_dssp SHHHHHHHHHTTTTCTTCCEEEEETTTT---------------EEEEEES---SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCceEEEEECCCC---------------EEEEEEe---CCHHHHHHHH
Confidence 4578899999999999999999987754 4556674 5677777765
No 47
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=56.12 E-value=2.3 Score=27.63 Aligned_cols=41 Identities=22% Similarity=0.130 Sum_probs=32.0
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
++|-+.+|..+.++ ||.+..+-+..+ .+.|.||+. ++|.+.
T Consensus 13 ~~C~~~i~~~l~~~-gv~~~~v~~~~~---------------~~~v~~~~~----~~i~~~ 53 (67)
T 2kyz_A 13 NHCKMRISKALEEL-GVKNYEVSVEEK---------------KVVVETENL----DSVLKK 53 (67)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEETTTT---------------EEEEECSCH----HHHHHH
T ss_pred HHHHHHHHHHHHHc-CCeEEEEECCCC---------------EEEEEECCH----HHHHHH
Confidence 47889999999999 999998877644 456788875 555554
No 48
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=54.71 E-value=3.6 Score=29.18 Aligned_cols=43 Identities=9% Similarity=-0.158 Sum_probs=32.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~ 110 (245)
.+|-|.+|..+..++||.++.+-+..+ .+.|.|+ ++.++|.+.
T Consensus 34 ~~C~~~Ie~aL~~~~GV~~v~v~l~~~---------------~~~V~~~---~~~~~i~~~ 76 (85)
T 2k2p_A 34 GHCAGVIKGAIEKTVPGAAVHADPASR---------------TVVVGGV---SDAAHIAEI 76 (85)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEETTTT---------------EEEEESC---CCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEECCCC---------------EEEEEec---CCHHHHHHH
Confidence 478899999999999999999887754 3445664 566776664
No 49
>3oep_A Putative uncharacterized protein TTHA0988; KIPI, KIPA, cyclophilin, allophanate hydrolase, structural G unknown function, NPPSFA; 1.75A {Thermus thermophilus} PDB: 3opf_A 3ore_A
Probab=46.70 E-value=43 Score=32.27 Aligned_cols=62 Identities=19% Similarity=0.308 Sum_probs=41.1
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHHhcCCCCcCCCCCCCCCCCceeeeccCCHHH
Q 025993 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEE 142 (245)
Q Consensus 63 l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff~~hdPt~~~rQg~d~G~QYRSaIf~~~e~q 142 (245)
++||+++..+|. +|.|.|||..+++++|++..-..... . ...++..+==|.|..++=
T Consensus 33 ~~gv~e~vP~~~-----------------sllV~ydp~~~~~~~l~~~l~~~~~~--~----~~~~r~v~IPV~Y~g~DL 89 (494)
T 3oep_A 33 PPGLLDAVPAYG-----------------VLYLEYDPRRLSRGRLLRLLKGLPQE--R----AEEGRVVEIPVRYDGEDL 89 (494)
T ss_dssp CTTEEEEEEETT-----------------EEEEEECTTTSCHHHHHHHHHHCC-------------CEEEEEEECCCTTH
T ss_pred CCCcEEeecccc-----------------EEEEEecCCCCCHHHHHHHHHHhhhc--c----cCCCcEEEEEeecChHHH
Confidence 699999998876 57899999999999999876443321 1 122345555667777644
Q ss_pred HHHHH
Q 025993 143 SRLAA 147 (245)
Q Consensus 143 ~~~A~ 147 (245)
..+|+
T Consensus 90 ~~vA~ 94 (494)
T 3oep_A 90 PEVAS 94 (494)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44554
No 50
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=45.11 E-value=36 Score=36.22 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=39.0
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHHh---cCCCCcCCCCCCCCCCCceeeeccCC
Q 025993 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT---SHDCRQVFGQGPDVGNQYRSIIFTNG 139 (245)
Q Consensus 63 l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff~---~hdPt~~~rQg~d~G~QYRSaIf~~~ 139 (245)
++||+++..||. ++.|.|||.++++.+|++..-. ...++... ...++..+==+.|.+
T Consensus 877 ~~gv~e~vP~~~-----------------sl~v~~dp~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~r~v~iPv~y~~ 936 (1236)
T 3va7_A 877 TVGIVEMSQGVR-----------------SVLIEFDGSKINQKALLKCLIAYESEIQFDKNW---NVKSKIFKLPMAFED 936 (1236)
T ss_dssp CTTEEEEEECSS-----------------EEEEEECTTTSCHHHHHHHHHHHHTTCCCCTTC---EEEEEEEEEEEEETC
T ss_pred CCCeEEeeccce-----------------EEEEEECCCCCCHHHHHHHHHHHHhhccccccc---CCCCcEEEEeeEeCC
Confidence 799999998886 5889999999999998876533 32221110 011344555567777
Q ss_pred HH
Q 025993 140 TE 141 (245)
Q Consensus 140 e~ 141 (245)
+.
T Consensus 937 ~~ 938 (1236)
T 3va7_A 937 SK 938 (1236)
T ss_dssp HH
T ss_pred cc
Confidence 63
No 51
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=42.82 E-value=4 Score=26.30 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=32.5
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
++|-+.+|..+..++||.++.+-+..+. +.| + ..++-++|.+..
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~~---------------~~v--~-~~~~~~~i~~~i 55 (66)
T 2roe_A 12 NHCVMAVTKALKKVPGVEKVEVSLEKGE---------------ALV--E-GTADPKALVQAV 55 (66)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEECSSSCB---------------EEE--C-SCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEeCCCE---------------EEE--C-CCCCHHHHHHHH
Confidence 4688999999999999999888776542 223 3 456777777653
No 52
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=40.82 E-value=3.6 Score=25.77 Aligned_cols=27 Identities=4% Similarity=-0.142 Sum_probs=23.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCC
Q 025993 50 LGSFWRSEAVFGCLNGVVRTTVGYAGG 76 (245)
Q Consensus 50 gGCFWg~Ea~F~~l~GV~~t~vGYaGG 76 (245)
.+|-+.+|..+..++||.++.+-+..+
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~ 39 (64)
T 2xmm_A 13 EACAEAVTKAVQNEDAQATVQVDLTSK 39 (64)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECTTTC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 468899999999999999988877654
No 53
>1b4u_A LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: a.88.1.1 PDB: 1bou_A
Probab=33.96 E-value=19 Score=29.19 Aligned_cols=44 Identities=14% Similarity=0.289 Sum_probs=35.1
Q ss_pred HHHhhhHHHHhhhhhhhcCChhHHHHHHHHHHHHHhcCCCCCCCC
Q 025993 201 ELEKSNLAAKLNSYAAELCPPRIQKQIDAKIKDIIRKGWPILRDE 245 (245)
Q Consensus 201 ~~~~S~~Aarlngy~~~~~~pk~~k~l~~~~~~~~~~~~~~~~~~ 245 (245)
+..+|.-+=+||.+|...+.|.+.+.|.+-=..++ +.|+|+++|
T Consensus 27 d~~~s~kgY~LNkf~~sL~~~~~RerF~aDpeA~l-~~~gLTeEE 70 (139)
T 1b4u_A 27 TAQRARKGYNLNQFAMSLMKAENRERFKADESAYL-DEWNLTPAA 70 (139)
T ss_dssp CHHHHHHTHHHHHHHHHTTSHHHHHHHHHCHHHHH-HTTTCCHHH
T ss_pred CHHHHHHhHHHHHHHHHHCCHHHHHHHHhCHHHHH-HHcCCCHHH
Confidence 45667777789999999999988888877666666 889998754
No 54
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=31.87 E-value=42 Score=28.44 Aligned_cols=46 Identities=9% Similarity=0.086 Sum_probs=35.7
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHH
Q 025993 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (245)
Q Consensus 49 agGCFWg~Ea~F~~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff 112 (245)
-.+|-+.+|..+.+++||.++.+-+..+ .+.|.++ ++.++|++..=
T Consensus 16 C~~Ca~~IekaL~~l~GV~~v~Vnl~~~---------------~v~V~~~---~~~~~I~~aI~ 61 (222)
T 1qup_A 16 CENCVNDIKACLKNVPGINSLNFDIEQQ---------------IMSVESS---VAPSTIINTLR 61 (222)
T ss_dssp STTHHHHHHHHHTTCTTEEEEEEETTTT---------------EEEEEES---SCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCeeEEEEEcCCC---------------EEEEecc---CCHHHHHHHHH
Confidence 5789999999999999999999987754 3445553 57777777653
No 55
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=29.30 E-value=38 Score=29.30 Aligned_cols=67 Identities=16% Similarity=0.070 Sum_probs=40.1
Q ss_pred cCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHHHhcCCCCcCC--CCCCCCCCCceeeeccCC
Q 025993 62 CLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVF--GQGPDVGNQYRSIIFTNG 139 (245)
Q Consensus 62 ~l~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~Ff~~hdPt~~~--rQg~d~G~QYRSaIf~~~ 139 (245)
.++||+++..||. +|.|.|||..++. ++++.. ...+-.... ..-...++..+==+.|.+
T Consensus 53 ~~~gv~e~vP~~~-----------------SllV~ydp~~~~~-~~~~~l-~~l~~~~~~~~~~~~~~~r~v~IPV~Y~g 113 (228)
T 3mml_B 53 ELLGVVDIVPAAR-----------------TVLVKLAGPRYQA-PTRQRL-GKLRVRPEAITHQPPGDRVDVTIDVVYDG 113 (228)
T ss_dssp TCTTEEEEEECSS-----------------EEEEEESSGGGHH-HHHHHH-TTCCCSCSSCCCSCGGGCCSEEEEEECCC
T ss_pred CCCCcEEeecccc-----------------EEEEEEcCccCCH-HHHHHH-HHHHhcccccccccCCCCcEEEEeccCCC
Confidence 3699999998876 5889999999987 455543 322211100 011123455666667777
Q ss_pred HHHHHHHH
Q 025993 140 TEESRLAA 147 (245)
Q Consensus 140 e~q~~~A~ 147 (245)
++=..+|+
T Consensus 114 pDL~~vA~ 121 (228)
T 3mml_B 114 ADLHEVAS 121 (228)
T ss_dssp TTHHHHHH
T ss_pred CCHHHHHH
Confidence 65555554
No 56
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=23.17 E-value=44 Score=25.32 Aligned_cols=23 Identities=26% Similarity=0.296 Sum_probs=19.9
Q ss_pred CCceeEEEEEEcCCCCCHHHHHH
Q 025993 87 GDHAESVQVEYDPRVINFRQLLE 109 (245)
Q Consensus 87 ~gHaEaV~V~yDp~~isy~~LL~ 109 (245)
.|.+-.-.|.||+++++-++||+
T Consensus 42 NgYAk~g~ViFDe~kl~~e~lLe 64 (96)
T 2f40_A 42 NPYAKVAEVVIDDSKVNIEELKE 64 (96)
T ss_dssp CTTTTCCEEECCBCSCSHHHHHH
T ss_pred ccccccceEEECcccCCHHHHHH
Confidence 36666667999999999999999
No 57
>2bps_A YUKD protein; ubiquitin-like protein, ubiquitin; 2.7A {Bacillus subtilis}
Probab=22.91 E-value=41 Score=24.56 Aligned_cols=41 Identities=7% Similarity=0.236 Sum_probs=28.1
Q ss_pred CCCCCHHHHHHHHHhcCCCCcCCCCCCCCCCCceeeeccCC
Q 025993 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNG 139 (245)
Q Consensus 99 p~~isy~~LL~~Ff~~hdPt~~~rQg~d~G~QYRSaIf~~~ 139 (245)
|..+|..+|++..|+..+....++-|+.+.-.-...++..+
T Consensus 24 P~~~tvK~Li~~l~ea~~l~~~~~~~~~irv~NK~~~L~~~ 64 (81)
T 2bps_A 24 SDYHPVKKVIDIAWQAQSVSMPPREGHWIRVVNKDKVFSGE 64 (81)
T ss_dssp ETTSBTTHHHHHHHHHSCCCSCCCTTCEEEEGGGTEEEETT
T ss_pred CCchhHHHHHHHHHHHhCCCcCCCCCCEEEEecCCEEEcCC
Confidence 88899999999999998876544444444444445555433
No 58
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=21.27 E-value=24 Score=27.49 Aligned_cols=39 Identities=15% Similarity=0.358 Sum_probs=31.3
Q ss_pred hhhhhccC--CCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCCHHHHHHHH
Q 025993 56 SEAVFGCL--NGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (245)
Q Consensus 56 ~Ea~F~~l--~GV~~t~vGYaGG~~~~PtY~~v~gHaEaV~V~yDp~~isy~~LL~~F 111 (245)
++.++..| .|++.+.-| .||- +..=||+.||+.++++..
T Consensus 40 l~kIl~~L~~aGlv~s~rG-~GGy----------------~Lar~p~~Itl~dVi~av 80 (145)
T 1xd7_A 40 VRRMISLLKKADILTSRAG-VPGA----------------SLKKDPADISLLEVYRAV 80 (145)
T ss_dssp HHHHHHHHHHTTSEECCSS-SSSC----------------EESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHCCceEeecC-CCCc----------------eecCCHHHCCHHHHHHHH
Confidence 57778776 799999999 7773 356689999999999875
Done!