Query 025996
Match_columns 245
No_of_seqs 333 out of 2302
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 03:10:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025996.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025996hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nqz_A COA pyrophosphatase (MU 100.0 1.4E-29 4.8E-34 210.6 13.3 161 50-220 32-194 (194)
2 3grn_A MUTT related protein; s 99.8 5.4E-19 1.8E-23 140.7 13.6 114 52-173 7-120 (153)
3 4dyw_A MUTT/nudix family prote 99.8 5.8E-19 2E-23 141.7 12.7 113 50-171 26-140 (157)
4 3gwy_A Putative CTP pyrophosph 99.8 1.2E-18 4E-23 136.7 13.6 100 65-173 16-117 (140)
5 2fkb_A Putative nudix hydrolas 99.8 1.1E-18 3.6E-23 142.6 13.0 115 50-172 34-149 (180)
6 1sjy_A MUTT/nudix family prote 99.8 2.3E-18 7.8E-23 137.3 13.1 115 52-172 12-130 (159)
7 3exq_A Nudix family hydrolase; 99.8 1.8E-18 6.1E-23 139.4 12.0 114 52-173 9-122 (161)
8 3i7u_A AP4A hydrolase; nudix p 99.8 7.4E-19 2.5E-23 138.1 9.4 103 55-172 6-112 (134)
9 3shd_A Phosphatase NUDJ; nudix 99.8 2.9E-18 9.9E-23 136.2 12.8 107 53-169 5-112 (153)
10 2w4e_A MUTT/nudix family prote 99.8 5.2E-19 1.8E-23 140.1 8.2 112 54-172 6-117 (145)
11 3gg6_A Nudix motif 18, nucleos 99.8 1.7E-18 5.7E-23 138.1 11.1 110 54-172 21-130 (156)
12 1ktg_A Diadenosine tetraphosph 99.8 3.1E-18 1.1E-22 133.4 12.1 111 54-172 4-118 (138)
13 1rya_A GDP-mannose mannosyl hy 99.8 3.6E-18 1.2E-22 136.3 12.4 112 53-173 18-139 (160)
14 3oga_A Nucleoside triphosphata 99.8 6.9E-18 2.3E-22 135.9 14.1 114 51-172 25-149 (165)
15 2rrk_A ORF135, CTP pyrophospho 99.8 1.7E-18 5.7E-23 135.1 9.8 110 53-172 8-117 (140)
16 3ees_A Probable pyrophosphohyd 99.8 3.7E-18 1.3E-22 134.9 11.3 109 55-173 23-131 (153)
17 1q27_A Putative nudix hydrolas 99.8 1.1E-17 3.7E-22 135.5 13.8 110 53-171 34-147 (171)
18 3hhj_A Mutator MUTT protein; n 99.8 9.2E-18 3.2E-22 134.2 12.9 110 54-173 30-141 (158)
19 3r03_A Nudix hydrolase; struct 99.8 1.2E-17 4.1E-22 130.9 13.3 110 54-173 9-120 (144)
20 2yvp_A NDX2, MUTT/nudix family 99.8 1E-18 3.6E-23 143.2 7.2 114 53-172 41-154 (182)
21 3eds_A MUTT/nudix family prote 99.7 3E-18 1E-22 136.8 9.3 109 53-174 21-137 (153)
22 1v8y_A ADP-ribose pyrophosphat 99.7 4.5E-18 1.5E-22 138.0 10.5 110 54-172 35-144 (170)
23 3u53_A BIS(5'-nucleosyl)-tetra 99.7 2.1E-17 7.2E-22 132.1 13.4 101 65-172 21-125 (155)
24 1vhz_A ADP compounds hydrolase 99.7 4.5E-18 1.5E-22 142.2 9.9 114 52-173 48-161 (198)
25 3h95_A Nucleoside diphosphate- 99.7 7.3E-18 2.5E-22 140.6 11.1 116 52-174 25-142 (199)
26 1hzt_A Isopentenyl diphosphate 99.7 2.8E-18 9.7E-23 141.8 8.5 115 50-172 29-150 (190)
27 3id9_A MUTT/nudix family prote 99.7 1.8E-17 6.2E-22 134.2 13.1 113 52-173 22-136 (171)
28 3q93_A 7,8-dihydro-8-oxoguanin 99.7 1.6E-17 5.5E-22 136.1 12.7 110 52-173 24-135 (176)
29 3f6a_A Hydrolase, nudix family 99.7 6.9E-18 2.4E-22 135.2 9.8 110 51-173 4-134 (159)
30 1vcd_A NDX1; nudix protein, di 99.7 9.4E-18 3.2E-22 128.7 9.9 104 55-172 4-107 (126)
31 3i9x_A MUTT/nudix family prote 99.7 4.2E-18 1.4E-22 140.5 8.5 104 67-172 45-155 (187)
32 2b0v_A Nudix hydrolase; struct 99.7 7.5E-18 2.5E-22 133.4 9.3 111 53-172 8-120 (153)
33 2pbt_A AP4A hydrolase; nudix p 99.7 8.7E-18 3E-22 130.0 9.1 104 54-172 5-112 (134)
34 3son_A Hypothetical nudix hydr 99.7 4.9E-17 1.7E-21 128.6 13.6 111 54-172 6-124 (149)
35 3dup_A MUTT/nudix family prote 99.7 1.8E-17 6.3E-22 147.1 11.8 159 8-172 66-242 (300)
36 3o6z_A GDP-mannose pyrophospha 99.7 1.2E-17 4.2E-22 138.6 9.9 115 53-172 45-166 (191)
37 1mut_A MUTT, nucleoside tripho 99.7 3.8E-18 1.3E-22 131.1 6.3 101 64-173 14-114 (129)
38 2dsc_A ADP-sugar pyrophosphata 99.7 1.6E-17 5.4E-22 140.1 10.2 118 53-172 62-183 (212)
39 2b06_A MUTT/nudix family prote 99.7 3.1E-17 1.1E-21 130.4 10.3 112 53-173 8-120 (155)
40 2fb1_A Conserved hypothetical 99.7 4.4E-17 1.5E-21 139.1 11.7 157 53-223 13-178 (226)
41 1g0s_A Hypothetical 23.7 kDa p 99.7 2.9E-17 1E-21 138.4 10.1 117 53-172 57-179 (209)
42 3q91_A Uridine diphosphate glu 99.7 1.6E-17 5.5E-22 141.3 8.3 118 52-172 35-188 (218)
43 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 1.6E-16 5.5E-21 124.2 13.3 106 53-170 9-119 (139)
44 1f3y_A Diadenosine 5',5'''-P1, 99.7 3.6E-17 1.2E-21 130.7 9.5 111 51-172 12-145 (165)
45 1mk1_A ADPR pyrophosphatase; n 99.7 1.3E-17 4.5E-22 140.1 6.7 114 54-172 44-158 (207)
46 2azw_A MUTT/nudix family prote 99.7 6.2E-17 2.1E-21 127.2 9.3 107 53-172 18-130 (148)
47 2o1c_A DATP pyrophosphohydrola 99.7 1.2E-16 4.2E-21 125.5 10.7 109 53-172 9-132 (150)
48 1x51_A A/G-specific adenine DN 99.7 1.5E-16 5.3E-21 126.8 11.2 96 69-171 35-132 (155)
49 3o8s_A Nudix hydrolase, ADP-ri 99.7 9.4E-17 3.2E-21 134.8 10.3 105 53-172 70-179 (206)
50 3gz5_A MUTT/nudix family prote 99.7 4.4E-17 1.5E-21 140.3 8.4 156 54-223 23-191 (240)
51 2kdv_A RNA pyrophosphohydrolas 99.7 9.8E-16 3.4E-20 124.0 14.6 111 52-172 7-135 (164)
52 2dho_A Isopentenyl-diphosphate 99.7 2.7E-16 9.3E-21 135.1 11.6 114 50-171 56-189 (235)
53 3cng_A Nudix hydrolase; struct 99.7 7.1E-16 2.4E-20 127.5 13.7 105 53-170 40-144 (189)
54 2pny_A Isopentenyl-diphosphate 99.7 3.6E-16 1.2E-20 135.3 12.4 114 50-171 67-200 (246)
55 2pqv_A MUTT/nudix family prote 99.7 1.7E-16 5.9E-21 126.1 9.6 106 54-172 20-129 (154)
56 2jvb_A Protein PSU1, mRNA-deca 99.7 1.2E-16 4E-21 125.8 7.9 97 69-173 18-115 (146)
57 3q1p_A Phosphohydrolase (MUTT/ 99.7 3.9E-16 1.3E-20 130.9 11.5 107 52-172 67-178 (205)
58 3fcm_A Hydrolase, nudix family 99.7 1.6E-15 5.6E-20 126.0 14.8 113 51-173 43-168 (197)
59 1vk6_A NADH pyrophosphatase; 1 99.7 5E-16 1.7E-20 136.1 11.8 94 69-171 152-245 (269)
60 3qsj_A Nudix hydrolase; struct 99.7 4.8E-16 1.7E-20 133.4 11.2 121 50-172 6-188 (232)
61 2fvv_A Diphosphoinositol polyp 99.7 1.3E-16 4.4E-21 133.1 7.0 95 69-171 55-149 (194)
62 1u20_A U8 snoRNA-binding prote 99.6 9.4E-17 3.2E-21 135.6 6.1 123 69-216 57-191 (212)
63 3f13_A Putative nudix hydrolas 99.6 2.2E-15 7.6E-20 122.2 13.5 83 69-167 28-110 (163)
64 2fml_A MUTT/nudix family prote 99.6 3E-15 1E-19 131.2 15.2 111 54-171 40-156 (273)
65 3fk9_A Mutator MUTT protein; s 99.6 1.9E-15 6.4E-20 125.1 12.3 95 69-173 16-115 (188)
66 2a6t_A SPAC19A8.12; alpha/beta 99.6 9.8E-16 3.4E-20 134.2 10.1 110 55-173 103-213 (271)
67 3fjy_A Probable MUTT1 protein; 99.6 2.5E-15 8.4E-20 136.4 10.3 104 65-174 35-160 (364)
68 1k2e_A Nudix homolog; nudix/MU 99.6 3.2E-15 1.1E-19 119.4 8.1 57 56-122 4-60 (156)
69 3e57_A Uncharacterized protein 99.6 6.4E-16 2.2E-20 130.7 3.9 108 56-172 70-188 (211)
70 2qjo_A Bifunctional NMN adenyl 99.6 2.3E-14 7.9E-19 127.9 13.3 112 53-172 203-322 (341)
71 2qjt_B Nicotinamide-nucleotide 99.6 4.7E-14 1.6E-18 126.7 14.5 113 53-172 208-329 (352)
72 3fsp_A A/G-specific adenine gl 99.5 1.8E-14 6.2E-19 131.3 8.8 95 64-171 250-344 (369)
73 2xsq_A U8 snoRNA-decapping enz 99.5 4.8E-14 1.6E-18 119.7 8.5 130 69-224 66-207 (217)
74 1q33_A Pyrophosphatase, ADP-ri 99.4 6.3E-12 2.1E-16 111.1 13.0 43 67-115 138-180 (292)
75 3kvh_A Protein syndesmos; NUDT 99.0 3.5E-10 1.2E-14 93.6 6.2 69 69-144 45-114 (214)
76 3bho_A Cleavage and polyadenyl 99.0 5.4E-09 1.9E-13 87.2 11.7 57 50-114 56-112 (208)
77 3rh7_A Hypothetical oxidoreduc 98.7 5.6E-08 1.9E-12 86.8 8.7 94 53-173 183-277 (321)
No 1
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.96 E-value=1.4e-29 Score=210.56 Aligned_cols=161 Identities=34% Similarity=0.493 Sum_probs=121.9
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF 129 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~ 129 (245)
+.+.++|++++ + .+|+.+|||++|+..++.++|.|+||||++|+|| ++++||+||++||||+++..+++++.+....
T Consensus 32 ~~~~~~~~v~i-~-~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~ 108 (194)
T 1nqz_A 32 HYRRAAVLVAL-T-READPRVLLTVRSSELPTHKGQIAFPGGSLDAGE-TPTQAALREAQEEVALDPAAVTLLGELDDVF 108 (194)
T ss_dssp -CEEEEEEEEE-E-SSSSCBBCEEEEC------CCCEECSEEECCTTC-CHHHHHHHHHHHHHCCCGGGCEEEEECCCEE
T ss_pred CCceEEEEEEE-e-cCCCeEEEEEEecCCCCCCCCeEECCcccCCCCC-CHHHHHHHHHHHHHCCCccceEEEEEccCcc
Confidence 45566666655 4 4565689999999876678999999999999999 9999999999999999999999999988766
Q ss_pred cCCceEEEEEEEEeCCCCCCC-CCCCcccceeEEEEccccc-cccCCCceeEEEEeCeEEEEEEEEeecCCCceEEechh
Q 025996 130 TKNGIIVVPVIGILPDRNSFI-PAPNTAEVDAIFDAPLEMF-LKDENRRAEEREWMGYKYLLHFFDYEAEGNKYVIWALT 207 (245)
Q Consensus 130 ~~~~~~v~~~v~~~~~~~~~~-~~~~~~Ev~~v~wvpl~el-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iWG~T 207 (245)
+..+..++.|++.+... .. ...+++|+.++.|++++++ .+...+....+ +.+..+.+++|.+ +++.|||+|
T Consensus 109 ~~~~~~~~~f~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~iWg~t 181 (194)
T 1nqz_A 109 TPVGFHVTPVLGRIAPE--ALDTLRVTPEVAQIITPTLAELRAVPLVRERRTL-PDGTEVPLYRYPW----RGLDIWGMT 181 (194)
T ss_dssp ETTTEEEEEEEEEECGG--GGGGCCCCTTEEEEECCBHHHHHHSCCEEEEEEC-TTSCEEEEEEEEE----TTEEEEHHH
T ss_pred CCCCeEEEEEEEEecCC--ccccCCCccceeEEEEEEHHHhccCCCcceeEEe-cCCcEEEEEEecc----CCcEEehhH
Confidence 66677888888887632 22 3467789999999999999 88766544332 2455677888888 478999999
Q ss_pred HHHHHHHHHHHhC
Q 025996 208 AGILINVASVVHQ 220 (245)
Q Consensus 208 a~il~~~~~~~~~ 220 (245)
|+||++++.++.|
T Consensus 182 a~il~~~~~~~~~ 194 (194)
T 1nqz_A 182 ARVLHDLLEQGPG 194 (194)
T ss_dssp HHHHHHHHC----
T ss_pred HHHHHHHHHHhcC
Confidence 9999999987754
No 2
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.80 E-value=5.4e-19 Score=140.72 Aligned_cols=114 Identities=22% Similarity=0.195 Sum_probs=89.0
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK 131 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~ 131 (245)
.+.+|.+++++ .++ +|||++|....+.++|.|+||||++|+|| ++.+||+||++||||+.+....+++.+...++.
T Consensus 7 ~~~~v~~vi~~-~~~--~vLL~~r~~~~~~~~g~w~~PgG~ve~gE-~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~ 82 (153)
T 3grn_A 7 YIISVYALIRN-EKG--EFLLLRRSENSRTNAGKWDLPGGKVNPDE-SLKEGVAREVWEETGITMVPGDIAGQVNFELTE 82 (153)
T ss_dssp EEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCEECSEEECCTTC-CHHHHHHHHHHHHHCCCCCCCSEEEEEEEECSS
T ss_pred eEEEEEEEEEc-CCC--cEEEEEEcCCCCCCCCeEECceeecCCCC-CHHHHHHhhhhhhhCcEeecceEEEEEEEecCC
Confidence 34566666665 355 79999999876688999999999999999 999999999999999999988888887655555
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
....+..|.+..... .+.+ .+|+.++.|++++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~---~~~~-~~e~~~~~W~~~~el~~~~ 120 (153)
T 3grn_A 83 KKVIAIVFDGGYVVA---DVKL-SYEHIEYSWVSLEKILGME 120 (153)
T ss_dssp CEEEEEEEEEEECCC---CCCC-CTTEEEEEEECHHHHTTCS
T ss_pred ceEEEEEEEEEecCC---cEec-CCCcceEEEEEHHHhhhcc
Confidence 555556666655432 2223 3799999999999998754
No 3
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.80 E-value=5.8e-19 Score=141.67 Aligned_cols=113 Identities=21% Similarity=0.274 Sum_probs=85.8
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF 129 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~ 129 (245)
...+.+|.+++++ ++ +|||++|... .++|.|+||||++|+|| ++.+||+||++|||||.+....+++.+...+
T Consensus 26 ~~~~~~v~~vi~~--~~--~vLL~~r~~~--~~~~~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 98 (157)
T 4dyw_A 26 EQPRVGCGAAIVR--DG--RILLIKRKRA--PEAGCWGLPGGKVDWLE-PVERAVCREIEEELGIALERATLLCVVDHID 98 (157)
T ss_dssp CCCEEEEEEEEEE--TT--EEEEEEECSS--SSTTCEECCEEECCTTC-CHHHHHHHHHHHHHSCEEESCEEEEEEEEEE
T ss_pred CCceeEEEEEEEE--CC--EEEEEEecCC--CCCCEEECCcccCCCCC-CHHHHHHHHHHHHHCcccccCcEEEEEEeec
Confidence 4456777776776 45 8999999965 47899999999999999 9999999999999999998888888876655
Q ss_pred cCCc--eEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccc
Q 025996 130 TKNG--IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 130 ~~~~--~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
.... .....|.+.+... . ....+++|+.++.|++++++.+
T Consensus 99 ~~~~~~~~~~~f~~~~~~~-~-~~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 99 AANGEHWVAPVYLAHAFSG-E-PRVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp TTTTEEEEEEEEEESEEES-C-CCCSCTTTEEEEEEEETTSCCS
T ss_pred cCCCcEEEEEEEEEEEcCC-C-cccCCCCcEeEEEEECHHHccc
Confidence 3223 3344455544322 1 1123568999999999999976
No 4
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.79 E-value=1.2e-18 Score=136.75 Aligned_cols=100 Identities=15% Similarity=0.051 Sum_probs=79.0
Q ss_pred CCcEEEEEEEeCCCCCC--CCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCceEEEEEEEE
Q 025996 65 DGDLRVFLTKRSSNLSS--HSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGIIVVPVIGI 142 (245)
Q Consensus 65 ~g~~~vLL~rR~~~~~~--~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~~v~~~v~~ 142 (245)
+| +|||+||.... . ++|.|+||||++|+|| ++.+||+||++||||+.+....+++.+...++.....++.|.+.
T Consensus 16 ~~--~vLL~~r~~~~-~~~~~g~w~lPgG~ve~gE-~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 91 (140)
T 3gwy_A 16 GE--KYLCVQRGQTK-FSYTSFRYEFPGGKVEEGE-SLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEITMHAFLCH 91 (140)
T ss_dssp TT--EEEEEEC----------CCEECSEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSCCEEEEEEEEE
T ss_pred CC--EEEEEEecCCC-CCCCCCeEECCCccCCCCC-CHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCceEEEEEEEEE
Confidence 45 89999998863 3 8899999999999999 99999999999999999988888888876666666777778877
Q ss_pred eCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 143 LPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 143 ~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
+... .++++|+.++.|++++++.+..
T Consensus 92 ~~~~-----~~~~~E~~~~~W~~~~el~~~~ 117 (140)
T 3gwy_A 92 PVGQ-----RYVLKEHIAAQWLSTREMAILD 117 (140)
T ss_dssp ECCS-----CCCCCSSCEEEEECHHHHTTSC
T ss_pred ecCC-----cccccccceeEeccHHHHhhCC
Confidence 7642 2345799999999999987743
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.79 E-value=1.1e-18 Score=142.62 Aligned_cols=115 Identities=15% Similarity=0.098 Sum_probs=88.3
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccC-CceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCc
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVAL-PGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPI 128 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~f-PGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~ 128 (245)
+..+.++.+++++ .+| +|||++|+.....++|.|+| |||++|+|| ++.+||+||++||||+....+..++.+...
T Consensus 34 ~~~~~~~~v~i~~-~~~--~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~l~~~~~~ 109 (180)
T 2fkb_A 34 CLRHRATYIVVHD-GMG--KILVQRRTETKDFLPGMLDATAGGVVQADE-QLLESARREAEEELGIAGVPFAEHGQFYFE 109 (180)
T ss_dssp TCCEEEEEEEEEC-SSS--CEEEEEECSSCSSSTTCEESSBCCBCBTTC-CHHHHHHHHHHHHHCCBSCCCEEEEEEEEE
T ss_pred CceeeEEEEEEEC-CCC--EEEEEECCCCCccCCCcEEeecCCCCCCCC-CHHHHHHHHHHHHHCCCccceEEEEEEEec
Confidence 4455677776665 355 79999998776567999999 999999999 999999999999999988888888876544
Q ss_pred ccCCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 129 FTKNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 129 ~~~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
.......++.|.+... ..+.++++|+.++.|++++++.+.
T Consensus 110 ~~~~~~~~~~f~~~~~----~~~~~~~~E~~~~~W~~~~el~~~ 149 (180)
T 2fkb_A 110 DKNCRVWGALFSCVSH----GPFALQEDEVSEVCWLTPEEITAR 149 (180)
T ss_dssp ETTEEEEEEEEEEECC----CCCCCCTTTEEEEEEECHHHHHTT
T ss_pred CCCceEEEEEEEEecC----CCcCCChhHhheEEEecHHHHHHH
Confidence 3333444555555522 223457789999999999998864
No 6
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.78 E-value=2.3e-18 Score=137.28 Aligned_cols=115 Identities=23% Similarity=0.215 Sum_probs=86.5
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCC--CCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSN--LSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF 129 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~--~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~ 129 (245)
.+.++.+++++ .++ +|||++|... ...++|.|+||||++|.|| ++.+||+||++||||+.+..+.+++.+...+
T Consensus 12 ~~~~~~~vi~~-~~~--~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~ 87 (159)
T 1sjy_A 12 ELRAAGVVLLN-ERG--DILLVQEKGIPGHPEKAGLWHIPSGAVEDGE-NPQDAAVREACEETGLRVRPVKFLGAYLGRF 87 (159)
T ss_dssp CEEEEEEEEBC-TTC--CEEEEEESCC----CCCCCEECSEEECCTTS-CHHHHHHHHHHHHHSCCEEEEEEEEEEEEEC
T ss_pred EEEeEEEEEEe-CCC--CEEEEEecccCcCCCCCCeEECCccccCCCC-CHHHHHHHHHHHHHCccceeeEEEEEEeccc
Confidence 34555555565 345 7999999862 3467899999999999999 9999999999999999998888888776544
Q ss_pred cC-CceEEEEEEEEeCCCCCCCCCC-CcccceeEEEEcccccccc
Q 025996 130 TK-NGIIVVPVIGILPDRNSFIPAP-NTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 130 ~~-~~~~v~~~v~~~~~~~~~~~~~-~~~Ev~~v~wvpl~el~~~ 172 (245)
+. ....++.|.+.+.... .+.+ +++|+.++.|+|++++.+.
T Consensus 88 ~~~~~~~~~~f~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~ 130 (159)
T 1sjy_A 88 PDGVLILRHVWLAEPEPGQ--TLAPAFTDEIAEASFVSREDFAQL 130 (159)
T ss_dssp TTSCEEEEEEEEEEECSSC--CCCCCCCSSEEEEEEECHHHHHHH
T ss_pred CCCceEEEEEEEEEccCCC--ccccCCCCceeEEEEecHHHHHHh
Confidence 33 3456666777665321 1344 6789999999999998764
No 7
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.77 E-value=1.8e-18 Score=139.37 Aligned_cols=114 Identities=16% Similarity=0.158 Sum_probs=83.8
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK 131 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~ 131 (245)
.+.+|.+++++..++ +|||++|.. ..|.|.|+||||++|+|| ++.+||+||++||||+.+...++++.+......
T Consensus 9 ~~~~v~~vi~~~~~~--~vLL~~r~~--~~~~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 83 (161)
T 3exq_A 9 VELVTMVMVTDPETQ--RVLVEDKVN--VPWKAGHSFPGGHVEVGE-PCATAAIREVFEETGLRLSGVTFCGTCEWFDDD 83 (161)
T ss_dssp EEEEEEEEEBCTTTC--CEEEECCCC--CTTTCSBBCCCCBCCTTS-CHHHHHHHHHHHHHCCEESCCEEEEEEEEECSS
T ss_pred ceEEEEEEEEeCCCC--EEEEEEccC--CCCCCCEEccceecCCCC-CHHHHHHHHHHHhhCcEecCCcEEEEEecccCC
Confidence 355565555553224 799999984 478889999999999999 999999999999999999988888887665533
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
.+..+..+++.+... .. .++..|+.++.|+|++++.+..
T Consensus 84 ~~~~~~~~~~~~~~~-~~--~~~~~e~~~~~W~~~~el~~~~ 122 (161)
T 3exq_A 84 RQHRKLGLLYRASNF-TG--TLKASAEGQLSWLPITALTREN 122 (161)
T ss_dssp CSSEEEEEEEEECCE-ES--CCCGGGTTTEEEECGGGCCTTT
T ss_pred CCeEEEEEEEEEecc-CC--ccCCCccceEEEeeHHHhhhCc
Confidence 333344444444321 11 2456788999999999997643
No 8
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.77 E-value=7.4e-19 Score=138.12 Aligned_cols=103 Identities=26% Similarity=0.287 Sum_probs=75.2
Q ss_pred EEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCc-
Q 025996 55 AVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNG- 133 (245)
Q Consensus 55 aV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~- 133 (245)
|+.+++++ +| +|||++|.. |.|+||||++|+|| |+.+||+||++||||+.+..+.+++.....+...+
T Consensus 6 aag~vv~~--~~--~vLL~~r~~------g~W~~PgG~ve~gE-t~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~ 74 (134)
T 3i7u_A 6 SAGGVLFK--DG--EVLLIKTPS------NVWSFPKGNIEPGE-KPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGE 74 (134)
T ss_dssp EEEEEEEE--TT--EEEEEECTT------SCEECCEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTE
T ss_pred EEEEEEEE--CC--EEEEEEeCC------CcEECCeeEecCCC-CHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCc
Confidence 33334454 45 899999753 68999999999999 99999999999999999888888887655443322
Q ss_pred ---eEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 134 ---IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 134 ---~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
..++.|.+.... ..+.++ +|+.++.|+|++++.+.
T Consensus 75 ~~~~~~~~f~~~~~~---~~~~~~-~E~~~~~W~~~~e~~~~ 112 (134)
T 3i7u_A 75 RIFKTVKYYLMKYKE---GEPRPS-WEVKDAKFFPIKEAKKL 112 (134)
T ss_dssp EEEEEEEEEEEEEEE---ECCCCC-TTSSEEEEEEHHHHHHH
T ss_pred eEEEEEEEEEEEEcC---CcCcCC-hhheEEEEEEHHHHhhh
Confidence 233445554432 223344 79999999999998764
No 9
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.77 E-value=2.9e-18 Score=136.15 Aligned_cols=107 Identities=16% Similarity=0.182 Sum_probs=82.5
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCccc-C
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFT-K 131 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~-~ 131 (245)
+.+|.+++.+ ++ +|||++|.. .++|.|+||||++|+|| |+.+||+||++||||+.+....+++....... .
T Consensus 5 ~~~v~~ii~~--~~--~vLl~~r~~---~~~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 76 (153)
T 3shd_A 5 HVTVACVVHA--EG--KFLVVEETI---NGKALWNQPAGHLEADE-TLVEAAARELWEETGISAQPQHFIRMHQWIAPDK 76 (153)
T ss_dssp EEEEEEEEEE--TT--EEEEEEEEE---TTEEEEECSEEECCTTC-CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTS
T ss_pred ceEEEEEEEe--CC--EEEEEEecC---CCCCCEECCeEEeCCCC-CHHHHHHHHHHHHHCcccccCcEEEEEEEecCCC
Confidence 4555554443 45 899999972 45789999999999999 99999999999999999998888887744332 3
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccc
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMF 169 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el 169 (245)
.....+.|++.+.... ...++.+|+.++.|++++++
T Consensus 77 ~~~~~~~f~~~~~~~~--~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 77 TPFLRFLFAIELEQIC--PTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp CCEEEEEEEEECSSCC--CCCCCSTTCCEEEEECHHHH
T ss_pred ceEEEEEEEEEccccC--cCCCCcccceeeEEecHHHh
Confidence 3445566777665432 23467789999999999999
No 10
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.77 E-value=5.2e-19 Score=140.13 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=74.7
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCc
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNG 133 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~ 133 (245)
.+|.+++++ .++ +|||++|... ...++.|+||||++|+|| ++++||+||++||||+.+..+..++.+........
T Consensus 6 ~~v~vi~~~-~~~--~vLLv~~~r~-~~~~~~w~~PgG~ve~gE-t~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 80 (145)
T 2w4e_A 6 RAVFILPVT-AQG--EAVLIRQFRY-PLRATITEIVAGGVEKGE-DLGAAAARELLEEVGGAASEWVPLPGFYPQPSISG 80 (145)
T ss_dssp EEEEEEEEE-TTS--EEEEEEEEET-TTTEEEEECEEEECCTTC-CHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCC
T ss_pred CEEEEEEEc-CCC--EEEEEEEEec-CCCCCEEEeCCccCCCCC-CHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccC
Confidence 456665665 455 6777665432 134578999999999999 99999999999999999887777776543333333
Q ss_pred eEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 134 IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 134 ~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
..++.|++..... . ...++++|+.++.|+|++++.+.
T Consensus 81 ~~~~~f~~~~~~~-~-~~~~~~~E~~~~~w~~~~el~~~ 117 (145)
T 2w4e_A 81 VVFYPLLALGVTL-G-AAQLEDTETIERVVLPLAEVYRM 117 (145)
T ss_dssp CEEEEEEEEEEEE-C---------CEEEEEEEHHHHHHH
T ss_pred ceEEEEEEEeccc-C-CCCCCCCCeEEEEEEeHHHHHHH
Confidence 4566666653211 1 23457789999999999998764
No 11
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.77 E-value=1.7e-18 Score=138.11 Aligned_cols=110 Identities=17% Similarity=0.147 Sum_probs=81.6
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCc
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNG 133 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~ 133 (245)
.+|.+++++ .++ +|||++|... .++|.|+||||++|.|| ++.+||+||++||||+.+....+++.+... ..
T Consensus 21 ~~v~~~i~~-~~~--~vLl~~r~~~--~~~~~w~~PgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~---~~ 91 (156)
T 3gg6_A 21 YVVLAVFLS-EQD--EVLLIQEAKR--ECRGSWYLPAGRMEPGE-TIVEALQREVKEEAGLHCEPETLLSVEERG---PS 91 (156)
T ss_dssp EEEEEECBC-TTS--EEEEEECCCT--TSTTCEECSEEECCTTC-CHHHHHHHHHHHHHCEEEEEEEEEEEEESS---TT
T ss_pred EEEEEEEEe-CCC--EEEEEEecCC--CCCCEEECCeeeccCCC-CHHHHHHHHHHHhhCceeEeeeEEEEEcCC---CC
Confidence 334444444 355 8999999864 57899999999999999 999999999999999999888888876542 33
Q ss_pred eEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 134 IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 134 ~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
...+.|++.+..........+.+|+.++.|++++++.+.
T Consensus 92 ~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 130 (156)
T 3gg6_A 92 WVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTP 130 (156)
T ss_dssp EEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSS
T ss_pred EEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCccc
Confidence 455566666543211111235579999999999998763
No 12
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.77 E-value=3.1e-18 Score=133.39 Aligned_cols=111 Identities=18% Similarity=0.118 Sum_probs=80.0
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEE----EeCCcc
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVT----ILDPIF 129 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg----~l~~~~ 129 (245)
.+|.+++++..+++.+|||++|+. .+|.|+||||++|+|| ++.+||+||++||||+.+..+.+++ ......
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 78 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGE-DEWQAAIRETKEEANITKEQLTIHEDCHETLFYEA 78 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTC-CHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCC-CHHHHHHHHHHHHHCCCccceEEeccccceEEEEe
Confidence 445555555334455899999973 3589999999999999 9999999999999999877666553 222222
Q ss_pred cCCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 130 TKNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 130 ~~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
......++.|++.+... ....+++|+.++.|++++++.+.
T Consensus 79 ~~~~~~~~~f~~~~~~~---~~~~~~~e~~~~~W~~~~el~~~ 118 (138)
T 1ktg_A 79 KGKPKSVKYWLAKLNNP---DDVQLSHEHQNWKWCELEDAIKI 118 (138)
T ss_dssp TTEEEEEEEEEEEECSC---CCCCCCTTEEEEEEECHHHHHHH
T ss_pred CCCceEEEEEEEEecCC---cccCCCchhcEeEeccHHHHHHh
Confidence 23345566677776542 12356789999999999998764
No 13
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.77 E-value=3.6e-18 Score=136.27 Aligned_cols=112 Identities=14% Similarity=0.154 Sum_probs=83.2
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCC--cceEEEEeCCccc
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPS--LVNVVTILDPIFT 130 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~--~~~~lg~l~~~~~ 130 (245)
..+|.+++++ .++ +|||++|+.. .++|.|+||||++|+|| ++.+||+||++||||+.+. .+.+++.+...++
T Consensus 18 ~~~v~~vi~~-~~~--~vLl~~r~~~--~~~g~w~~PgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 91 (160)
T 1rya_A 18 LVSLDFIVEN-SRG--EFLLGKRTNR--PAQGYWFVPGGRVQKDE-TLEAAFERLTMAELGLRLPITAGQFYGVWQHFYD 91 (160)
T ss_dssp EEEEEEEEEC-TTS--CEEEEEECSS--SSTTSEECCEEECCTTC-CHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEES
T ss_pred EEEEEEEEEc-CCC--EEEEEeccCC--CCCCEEECCccccCCCC-CHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEc
Confidence 4566666665 345 7999999874 57899999999999999 9999999999999999863 6677777654433
Q ss_pred CC--------ceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 131 KN--------GIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 131 ~~--------~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
.. ...++.|.+.+.. ..+..+++|+.++.|++++++.+..
T Consensus 92 ~~~~~~~~~~~~~~~~f~~~~~~---~~~~~~~~e~~~~~W~~~~el~~~~ 139 (160)
T 1rya_A 92 DNFSGTDFTTHYVVLGFRFRVSE---EELLLPDEQHDDYRWLTSDALLASD 139 (160)
T ss_dssp SBTTBSSSCEEEEEEEEEEECCG---GGCCCCSSSEEEEEEECHHHHHHCT
T ss_pred ccccCCCcCcEEEEEEEEEEcCc---cccccCCCccceEEEecHHHHhhcc
Confidence 21 3344555555442 2234567899999999999998744
No 14
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.77 E-value=6.9e-18 Score=135.90 Aligned_cols=114 Identities=18% Similarity=0.165 Sum_probs=74.0
Q ss_pred CCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEe-----
Q 025996 51 KKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTIL----- 125 (245)
Q Consensus 51 ~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l----- 125 (245)
.++.+++++++.. ++ +|||++|+...+.++|.|+||||++|+|| ++++||+||++||||+.+....+++..
T Consensus 25 ~~~~~~~~~ii~~-~~--~vLL~~r~~~~~~~~g~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 100 (165)
T 3oga_A 25 MRQRTIVCPLIQN-DG--CYLLCKMADNRGVFPGQWALSGGGVEPGE-RIEEALRREIREELGEQLILSDITPWTFRDDI 100 (165)
T ss_dssp CEEEEEEEEEEEE-TT--EEEEEEECC------CCEECCCEECCTTC-CHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEeC-CC--EEEEEEecCCCCCCCCeEECCccccCCCC-CHHHHHHHHHHHHhCCCccccceeeeeeecce
Confidence 4455555555553 55 89999999876788999999999999999 999999999999999998776655421
Q ss_pred -CCcccCCc---eE--EEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 126 -DPIFTKNG---II--VVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 126 -~~~~~~~~---~~--v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
...+.... .. +..|.+.... ..... .+|+.++.|++++++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 101 RIKTYADGRQEEIYMIYLIFDCVSAN---RDICI-NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEC--CCEEEEEEEEEEEEEEESC---CCCCC-CTTEEEEEEECGGGGGGS
T ss_pred eeEecCCCCceeEEEEEEEEEeeccC---CCccC-CchheeeEEccHHHHhhC
Confidence 11111111 11 2233333332 12223 379999999999999874
No 15
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.76 E-value=1.7e-18 Score=135.08 Aligned_cols=110 Identities=21% Similarity=0.261 Sum_probs=81.7
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKN 132 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~ 132 (245)
...+.++++. .+| +|||++|+.. +.++|.|+||||+++.|| ++.+||+||++||||+.+....+++.+...++..
T Consensus 8 ~~~~~~~ii~-~~~--~vLl~~r~~~-~~~~g~w~lPgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~ 82 (140)
T 2rrk_A 8 MIEVVAAIIE-RDG--KILLAQRPAQ-SDQAGLWEFAGGKVEPDE-SQRQALVRELREELGIEATVGEYVASHQREVSGR 82 (140)
T ss_dssp EEEEEEEEEE-ETT--EEEEEECCSS-CSCCCCEECCEEECCTTS-CHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTE
T ss_pred cceEEEEEEE-cCC--EEEEEEcCCC-CCCCCEEECCceecCCCC-CHHHHHHHHHHHHHCCeeecccEEEEEEEecCCc
Confidence 3333344444 356 8999999776 468999999999999999 9999999999999999988888888775544444
Q ss_pred ceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 133 GIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 133 ~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
...++.|.+..... .++.+|+.++.|++++++.+.
T Consensus 83 ~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 83 IIHLHAWHVPDFHG-----TLQAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp EEEEEEEEESEEEE-----CCCCSSCSCEEEECHHHHTTS
T ss_pred EEEEEEEEEEeeCC-----CcCCCccceeEEeCHHHHhhC
Confidence 44455555543321 234578899999999998764
No 16
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.76 E-value=3.7e-18 Score=134.88 Aligned_cols=109 Identities=19% Similarity=0.306 Sum_probs=84.2
Q ss_pred EEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCce
Q 025996 55 AVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGI 134 (245)
Q Consensus 55 aV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~ 134 (245)
.|+++++. .+| +|||++|... +.++|.|+||||++|+|| ++.+||+||+.||||+.+....+++.....++....
T Consensus 23 ~~~~~i~~-~~~--~vLl~~r~~~-~~~~g~w~~PgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~ 97 (153)
T 3ees_A 23 PVVAGFLR-KDG--KILVGQRPEN-NSLAGQWEFPGGKIENGE-TPEEALARELNEELGIEAEVGELKLACTHSYGDVGI 97 (153)
T ss_dssp EEEEEEEE-ETT--EEEEEECCTT-STTTTCEECSEEECCTTC-CHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEE
T ss_pred EEEEEEEE-ECC--EEEEEEeCCC-CCCCCeEECCceeeCCCC-CHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeE
Confidence 44444454 345 8999999886 478999999999999999 999999999999999998888888876655555455
Q ss_pred EEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 135 IVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 135 ~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
.++.|.+.+... .++++|+.++.|++++++.+..
T Consensus 98 ~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~ 131 (153)
T 3ees_A 98 LILFYEILYWKG-----EPRAKHHMMLEWIHPEELKHRN 131 (153)
T ss_dssp EEEEEEECEEES-----CCCCSSSSEEEEECGGGGGGSC
T ss_pred EEEEEEEEECCC-----CcCCCccceEEEecHHHhhhCC
Confidence 555555544321 2456889999999999998743
No 17
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.76 E-value=1.1e-17 Score=135.53 Aligned_cols=110 Identities=16% Similarity=0.121 Sum_probs=84.0
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCcc-CCceecCCCCCCHHHHHHHHHHHHHCCCCCc--ceEEEEeC-Cc
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVA-LPGGKREENDADDAGTALREAKEEIGLDPSL--VNVVTILD-PI 128 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~-fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~--~~~lg~l~-~~ 128 (245)
+.+|.+++++ .+| +|||++|+.....++|.|+ ||||++++|| ++.+||+||++||||+.+.. +..++.+. ..
T Consensus 34 ~~~v~v~i~~-~~~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~ 109 (171)
T 1q27_A 34 VRVVNAFLRN-SQG--QLWIPRRSPSKSLFPNALDVSVGGAVQSGE-TYEEAFRREAREELNVEIDALSWRPLASFSPFQ 109 (171)
T ss_dssp CEEEEEEEEE-TTT--EEEECCSCCSSSCCCCSCCCSEEEECSSSS-CHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSS
T ss_pred ceEEEEEEEC-CCC--eEEEEEecCCCCCCCCccccccCccccCCC-CHHHHHHHHHHHHHCCcccccceEEEEEEeccC
Confidence 5566666666 456 8999999877667899998 9999999999 99999999999999999877 45666665 33
Q ss_pred ccCCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccc
Q 025996 129 FTKNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 129 ~~~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
..... .++.|.+... ..+.++++|+.++.|++++++.+
T Consensus 110 ~~~~~-~~~~f~~~~~----~~~~~~~~E~~~~~W~~~~el~~ 147 (171)
T 1q27_A 110 TTLSS-FMCVYELRSD----ATPIFNPNDISGGEWLTPEHLLA 147 (171)
T ss_dssp SCCSS-EEEEEEEECC----CCCCSCTTTCSCCEEECHHHHHH
T ss_pred CCCcc-EEEEEEEEEC----CccccCchhhheEEEecHHHHHH
Confidence 32222 5556666552 12345678999999999999874
No 18
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.75 E-value=9.2e-18 Score=134.21 Aligned_cols=110 Identities=22% Similarity=0.264 Sum_probs=80.6
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceE--EEEeCCcccC
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNV--VTILDPIFTK 131 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~--lg~l~~~~~~ 131 (245)
.++.+++++ .++ +|||++|... +.++|.|+||||++|+|| ++.+||+||++||||+.+....+ ++.....++.
T Consensus 30 ~~~~~~i~~-~~~--~vLL~~r~~~-~~~~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 104 (158)
T 3hhj_A 30 IVVACALLD-QDN--RVLLTQRPEG-KSLAGLWEFPGGKVEQGE-TPEASLIRELEEELGVHVQADNLFPLTFASHGYET 104 (158)
T ss_dssp EEEEEEEBC-TTS--EEEEEECCCT-TSCCCCCBCCEEECCTTC-CHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS
T ss_pred EEEEEEEEe-CCC--EEEEEEeCCC-CCCCCEEECCceeecCCC-CHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCC
Confidence 334444444 455 8999999876 478999999999999999 99999999999999999887643 5554444444
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
....++.|.+.... ..++.+|+.++.|++++++.+..
T Consensus 105 ~~~~~~~~~~~~~~-----~~~~~~e~~~~~W~~~~el~~~~ 141 (158)
T 3hhj_A 105 FHLLMPLYFCSHYK-----GVAQGREGQNLKWIFINDLDKYP 141 (158)
T ss_dssp CEEEEEEEEESCCB-----SCCCCTTSCEEEEEEGGGGGGSC
T ss_pred cEEEEEEEEEEECC-----CccCCccccceEEEcHHHHhhCC
Confidence 44455555544332 13456899999999999997643
No 19
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.75 E-value=1.2e-17 Score=130.95 Aligned_cols=110 Identities=20% Similarity=0.244 Sum_probs=80.8
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcce--EEEEeCCcccC
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVN--VVTILDPIFTK 131 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~--~lg~l~~~~~~ 131 (245)
.++++++++ .+| +|||++|... +.++|.|+||||++|.|| ++.+||+||++||||+.+.... .++.....++.
T Consensus 9 ~~~~~vi~~-~~~--~vLl~~r~~~-~~~~g~w~lPgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~ 83 (144)
T 3r03_A 9 LVTAAALID-PDG--RVLLAQRPPG-KSLAGLWEFPGGKLEPGE-TPEAALVRELAEELGVDTRASCLAPLAFASHSYDT 83 (144)
T ss_dssp EEEEEEEBC-TTS--CEEEEECCTT-SSSTTCEECSEEECCTTC-CHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS
T ss_pred EEEEEEEEc-CCC--EEEEEEeCCC-CCCCCcEECCCcEecCCC-CHHHHHHHHHHHHhCceeeccceEEEEeeeccCCC
Confidence 334444444 345 7999999876 468999999999999999 9999999999999999988763 34444444444
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
....++.|.+..... .++++|+.++.|++++++.+..
T Consensus 84 ~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~ 120 (144)
T 3r03_A 84 FHLLMPLYACRSWRG-----RATAREGQTLAWVRAERLREYP 120 (144)
T ss_dssp SEEEEEEEEECCCBS-----CCCCCSSCEEEEECGGGGGGSC
T ss_pred eEEEEEEEEEEecCC-----ccCCCCcceEEEEeHHHhccCC
Confidence 445555555544321 2456889999999999997744
No 20
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.75 E-value=1e-18 Score=143.19 Aligned_cols=114 Identities=18% Similarity=0.276 Sum_probs=85.6
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKN 132 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~ 132 (245)
..+|.+++++ .++ +|||++|... ..++|.|+||||++|+|| ++++||+||++||||+.+..+.+++.+....+..
T Consensus 41 ~~~v~v~i~~-~~~--~vLL~~r~~~-~~~~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 115 (182)
T 2yvp_A 41 VAASFVLPVT-ERG--TALLVRQYRH-PTGKFLLEVPAGKVDEGE-TPEAAARRELREEVGAEAETLIPLPSFHPQPSFT 115 (182)
T ss_dssp CEEEEEEEBC-TTS--EEEEEEEEEG-GGTEEEEECCEEECCTTC-CHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTB
T ss_pred CCEEEEEEEc-CCC--EEEEEEeccC-CCCCcEEEeccccCCCCc-CHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCcc
Confidence 3466665665 355 7999998765 356789999999999999 9999999999999999998888887765444444
Q ss_pred ceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 133 GIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 133 ~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
...++.|++..... ......+++|+.++.|+|++++.+.
T Consensus 116 ~~~~~~f~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~ 154 (182)
T 2yvp_A 116 AVVFHPFLALKARV-VTPPTLEEGELLESLELPLTEVYAL 154 (182)
T ss_dssp CCEEEEEEECSCEE-CSCCCCCTTCCEEEEEEEHHHHHHH
T ss_pred ccEEEEEEEecccc-CCCCCCCCCceEEEEEEEHHHHHHH
Confidence 45666666653221 1123457789999999999999764
No 21
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.75 E-value=3e-18 Score=136.81 Aligned_cols=109 Identities=16% Similarity=0.115 Sum_probs=72.8
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCc----
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPI---- 128 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~---- 128 (245)
+.+|.+++++ .++ +|||++|. +|.|+||||++|+|| ++.+||+||++|||||.+....+++.+...
T Consensus 21 ~~~v~~ii~~-~~~--~vLL~~r~------~~~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 90 (153)
T 3eds_A 21 XPSVAAVIKN-EQG--EILFQYPG------GEYWSLPAGAIELGE-TPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRY 90 (153)
T ss_dssp EEEEEEEEBC-TTC--CEEEECC---------CBBCSEEECCTTS-CHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEE
T ss_pred eeeEEEEEEc-CCC--eEEEEEcC------CCcEECCccccCCCC-CHHHHHHHHHHHHHCccceeeeEEEEecccceee
Confidence 4555555554 345 79999887 589999999999999 999999999999999999888888876321
Q ss_pred -ccCC---ceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccCC
Q 025996 129 -FTKN---GIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDEN 174 (245)
Q Consensus 129 -~~~~---~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~~ 174 (245)
+... ...+..|.+.+... .+.++.+|+.++.|++++++.+...
T Consensus 91 ~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 91 TYSNGDEVEYIVVVFECEVTSG---ELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp ECTTSCEEEEEEEEEEEEEEEE---CCC-------CEEEECGGGCCCBSS
T ss_pred ecCCCCeEEEEEEEEEEEecCC---ccccCCCcEEEEEEECHHHCchhcc
Confidence 1221 12445566655432 2345678999999999999987543
No 22
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.75 E-value=4.5e-18 Score=138.05 Aligned_cols=110 Identities=17% Similarity=0.130 Sum_probs=78.0
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCc
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNG 133 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~ 133 (245)
.+|.+++++ +| +|||++|.... .++|.|+||||++|+|| ++++||+||++||||+ +..+..++.+........
T Consensus 35 ~~v~vii~~--~~--~vLL~~~~r~~-~~~~~w~lPgG~ve~gE-s~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~ 107 (170)
T 1v8y_A 35 PAVAVIALR--EG--RMLFVRQMRPA-VGLAPLEIPAGLIEPGE-DPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTD 107 (170)
T ss_dssp CEEEEEEEE--TT--EEEEEECCBTT-TTBCCBBCSEEECCTTC-CHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBC
T ss_pred CeEEEEEEE--CC--EEEEEEEEeCC-CCCCEEECCccccCCCC-CHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccc
Confidence 456565665 45 79999886652 57899999999999999 9999999999999999 888888887654444344
Q ss_pred eEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 134 IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 134 ~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
..++.|++..... ....++++|+.++.|+|++++.+.
T Consensus 108 ~~~~~f~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~ 144 (170)
T 1v8y_A 108 EKTHVFLAENLKE--VEAHPDEDEAIEVVWMRPEEALER 144 (170)
T ss_dssp CEEEEEEEEEEEE--CC--------CEEEEECHHHHHHH
T ss_pred cEEEEEEEEeccc--cCCCCCCCceEEEEEEEHHHHHHH
Confidence 5566666665321 123456789999999999998764
No 23
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.74 E-value=2.1e-17 Score=132.11 Aligned_cols=101 Identities=21% Similarity=0.205 Sum_probs=74.4
Q ss_pred CCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc----cCCceEEEEEE
Q 025996 65 DGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF----TKNGIIVVPVI 140 (245)
Q Consensus 65 ~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~----~~~~~~v~~~v 140 (245)
+++.++||++|+.. +|.|+||||++|+|| |+.+||+||++||||+.+....+++.+.... ......+..|+
T Consensus 21 n~~~e~LL~~r~~~----~~~W~lPgG~ve~gE-t~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWTPPKGHVEPGE-DDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWL 95 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEECSEEECCSSC-CHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEecCC----CCCEECCeeeccCCC-CHHHHHHHHHHHHHCCccccceeeeeEeeeeecCCCcceeEEEEEE
Confidence 56679999999864 478999999999999 9999999999999999998877776543321 11223344455
Q ss_pred EEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 141 GILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 141 ~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
+.+... ...+. ..+|+.++.|++++++.+.
T Consensus 96 ~~~~~~-~~~~~-~~~E~~~~~W~~~~ea~~~ 125 (155)
T 3u53_A 96 AEVKDY-DVEIR-LSHEHQAYRWLGLEEACQL 125 (155)
T ss_dssp EEESCT-TCCCC-CCTTEEEEEEECHHHHHHH
T ss_pred EEEecc-CCccC-CCcceeEEEEeEHHHHHHH
Confidence 555542 22233 3479999999999998653
No 24
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.74 E-value=4.5e-18 Score=142.24 Aligned_cols=114 Identities=18% Similarity=0.133 Sum_probs=86.8
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK 131 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~ 131 (245)
+..||+|++++ ++ +|||++|... ..++|.|+||||++|+|| ++++||+||++||||+.+..+++++.+......
T Consensus 48 ~~~av~vl~~~--~~--~vLLvrq~r~-~~~~~~welPgG~ve~gE-s~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~ 121 (198)
T 1vhz_A 48 NREAVMIVPIV--DD--HLILIREYAV-GTESYELGFSKGLIDPGE-SVYEAANRELKEEVGFGANDLTFLKKLSMAPSY 121 (198)
T ss_dssp CCCEEEEEEEE--TT--EEEEEEEEET-TTTEEEEECEEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTT
T ss_pred CCCEEEEEEEE--CC--EEEEEEcccC-CCCCcEEEeCcccCCCCc-CHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCc
Confidence 34566666565 23 7999987654 356789999999999999 999999999999999999888888887654444
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
....++.|++...... ....+++|+.++.|+|++++.+.-
T Consensus 122 ~~~~~~~f~a~~~~~~--~~~~~~~E~~~~~w~~~~el~~~~ 161 (198)
T 1vhz_A 122 FSSKMNIVVAQDLYPE--SLEGDEPEPLPQVRWPLAHMMDLL 161 (198)
T ss_dssp CCCEEEEEEEEEEEEC--CCCCCCSSCCCEEEEEGGGGGGGG
T ss_pred cCcEEEEEEEEeCCcc--cCCCCCCceEEEEEEEHHHHHHHH
Confidence 4556677777654321 224577899999999999998743
No 25
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.74 E-value=7.3e-18 Score=140.61 Aligned_cols=116 Identities=22% Similarity=0.234 Sum_probs=80.1
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK 131 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~ 131 (245)
.+.+|.+++++..++ +|||++|.. +++|.|+||||++|+|| ++.+||+||++||||+.+....+++........
T Consensus 25 ~~v~v~~~v~~~~~~--~vLL~~r~~---~~~g~w~lPGG~ve~gE-s~~~aA~REl~EEtGl~~~~~~l~~~~~~~~~~ 98 (199)
T 3h95_A 25 HQVGVAGAVFDESTR--KILVVQDRN---KLKNMWKFPGGLSEPEE-DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNP 98 (199)
T ss_dssp -CCEEEEEEEETTTT--EEEEEEESS---SSTTSBBCCEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEECC---
T ss_pred ccceEEEEEEeCCCC--EEEEEEEcC---CCCCCEECCccccCCCC-CHHHHHHHHHHHHhCCccccceEEEEEeeecCC
Confidence 345565656664344 899999865 35799999999999999 999999999999999998877766643222211
Q ss_pred --CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccCC
Q 025996 132 --NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDEN 174 (245)
Q Consensus 132 --~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~~ 174 (245)
.......|++.+... ...+.++++|+.++.|+|++++.+...
T Consensus 99 ~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~ 142 (199)
T 3h95_A 99 GAFGKSDMYIICRLKPY-SFTINFCQEECLRCEWMDLNDLAKTEN 142 (199)
T ss_dssp ------CEEEEEEEEES-CCCCCCCTTTEEEEEEEEHHHHHHCSS
T ss_pred CCceeEEEEEEEEEcCC-CcccCCCccceeeeEEEeHHHHhhhhh
Confidence 122223344444322 233456789999999999999987543
No 26
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.74 E-value=2.8e-18 Score=141.78 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=84.3
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccC-CceecCCCCCCHHHHHHHHHHHHHCCCCCcc-eEEEEeCC
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVAL-PGGKREENDADDAGTALREAKEEIGLDPSLV-NVVTILDP 127 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~f-PGG~ve~gE~s~~~aA~REl~EEtGl~~~~~-~~lg~l~~ 127 (245)
+..+.+|.+++++ .+| +|||++|+.....++|.|+| |||++|+|| ++++||+||++||||+.+..+ .+++.+..
T Consensus 29 ~~~~~~v~~~i~~-~~g--~vLl~~R~~~~~~~~g~w~~~PgG~ve~gE-t~~~aa~REl~EEtGl~~~~~~~~~~~~~~ 104 (190)
T 1hzt_A 29 TRLHLAFSSWLFN-AKG--QLLVTRRALSKKAWPGVWTNSVCGHPQLGE-SNEDAVIRRCRYELGVEITPPESIYPDFRY 104 (190)
T ss_dssp --CEECEEEEEEC-TTC--CEEEEEECTTCSSSTTCEEESEEECCCTTC-CHHHHHHHHHHHHHCCCBSCCEEEETTCEE
T ss_pred CceEEEEEEEEEc-CCC--EEEEEEeCCCCCCCCCcccCcccccCCCCC-CHHHHHHHHHHHHHCCCchhhheeeeeEEE
Confidence 3445566666665 455 79999998776678999999 999999999 999999999999999998887 66665432
Q ss_pred cc--c-C--CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 128 IF--T-K--NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 128 ~~--~-~--~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
.. . . ....++.|++.+.. .+.++++|+.++.|++++++.+.
T Consensus 105 ~~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~E~~~~~W~~~~el~~~ 150 (190)
T 1hzt_A 105 RATDPSGIVENEVCPVFAARTTS----ALQINDDEVMDYQWCDLADVLHG 150 (190)
T ss_dssp EEECTTSCEEEEECCEEEEEBCS----CCCCCTTTEEEEEEECHHHHHHH
T ss_pred EeeCCCCCcceEEEEEEEEecCC----CCcCCccceeeEEEecHHHHHHH
Confidence 21 1 1 12233455555432 23457789999999999998763
No 27
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.74 E-value=1.8e-17 Score=134.18 Aligned_cols=113 Identities=18% Similarity=0.249 Sum_probs=79.6
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK 131 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~ 131 (245)
.+.+|.+++++ +| +|||++|... +|.|+||||++|+|| ++.+||+||++||||+.+....+++.+......
T Consensus 22 ~~~~v~~ii~~--~~--~vLL~~r~~~----~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 92 (171)
T 3id9_A 22 MQVRVTGILIE--DE--KVLLVKQKVA----NRDWSLPGGRVENGE-TLEEAMIREMREETGLEVKIKKLLYVCDKPDAS 92 (171)
T ss_dssp CEEEEEEEEEE--TT--EEEEEECSST----TCCEECCEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEEETTSS
T ss_pred eEEEEEEEEEE--CC--EEEEEEEECC----CCeEECCCccCCCCC-CHHHHHHHHHHHHHCCccccceEEEEEcccCCC
Confidence 45556555555 45 8999999863 689999999999999 999999999999999998877777776554444
Q ss_pred CceEEEEEEEEeCCCCCC--CCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSF--IPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~--~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
.......|.+........ ...++++|+.++.|+|++++.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 136 (171)
T 3id9_A 93 PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYG 136 (171)
T ss_dssp SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGT
T ss_pred CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCC
Confidence 444444455544422110 112466899999999999998754
No 28
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.74 E-value=1.6e-17 Score=136.06 Aligned_cols=110 Identities=22% Similarity=0.101 Sum_probs=79.8
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK 131 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~ 131 (245)
+++++++ ++. .++ +|||++|... .++|.|+||||++|+|| ++.+||+||++||||+.+..+.+++.+...+..
T Consensus 24 ~~~~~~~-vi~-~~~--~vLL~~r~~~--~~~g~W~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~ 96 (176)
T 3q93_A 24 SRLYTLV-LVL-QPQ--RVLLGMKKRG--FGAGRWNGFGGKVQEGE-TIEDGARRELQEESGLTVDALHKVGQIVFEFVG 96 (176)
T ss_dssp EEEEEEE-EEE-CSS--EEEEEEECSS--TTTTSEECEEEECCTTS-CHHHHHHHHHHHHHSCEESCCEEEEEEEEEETT
T ss_pred CcEEEEE-EEE-eCC--EEEEEEEcCC--CCCCeEECceecCCCCC-CHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCC
Confidence 3444444 343 345 8999999654 57899999999999999 999999999999999999988988887654443
Q ss_pred Cce--EEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGI--IVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~--~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
... .++.|.+.... . .+.+.|..++.|++++++.+..
T Consensus 97 ~~~~~~~~~f~~~~~~---~--~~~~~e~~~~~W~~~~el~~~~ 135 (176)
T 3q93_A 97 EPELMDVHVFCTDSIQ---G--TPVESDEMRPCWFQLDQIPFKD 135 (176)
T ss_dssp CSCEEEEEEEEESCEE---S--CCCCCSSEEEEEEETTCCCGGG
T ss_pred CCcEEEEEEEEEECCC---C--CcCCCcceeeEEeeHHHccccc
Confidence 322 33444443221 1 2345677888999999998643
No 29
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.74 E-value=6.9e-18 Score=135.23 Aligned_cols=110 Identities=21% Similarity=0.191 Sum_probs=78.6
Q ss_pred CCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCc--
Q 025996 51 KKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPI-- 128 (245)
Q Consensus 51 ~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~-- 128 (245)
.++.+|.+++++ ++ +|||++|.. +|.|+||||++|+|| ++.+||+||++|||||.+..+.+++.+...
T Consensus 4 ~~~~~v~~vi~~--~~--~vLL~~r~~-----~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 73 (159)
T 3f6a_A 4 NRHFTVSVFIVC--KD--KVLLHLHKK-----AKKMLPLGGHIEVNE-LPEEACIREAKEEAGLNVTLYNPIDINLKKSC 73 (159)
T ss_dssp CSCEEEEEEEEE--TT--EEEEEECSS-----SCCEECEEEECCTTC-CHHHHHHHHHHHHHCCCCEECCCCCHHHHHHH
T ss_pred cceEEEEEEEEE--CC--EEEEEEcCC-----CCeEECCccCccCCC-CHHHHHHHHHHHHhCCCceecccccccccccc
Confidence 345666666665 45 899999875 489999999999999 999999999999999988766655422100
Q ss_pred ------------------c-cCCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 129 ------------------F-TKNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 129 ------------------~-~~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
+ .........|.+..... ...++++|+.++.|+|++++.+..
T Consensus 74 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 74 DLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSF---ETSPEIGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp HHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCS---CCCCCTTSCCCEEEECSSSSTTCS
T ss_pred cccccccccCccccccccCCCCceEEEEEEEEEeCCC---CcCCCCCcccceEEeeHHHHhhCc
Confidence 0 11112334555655432 234567899999999999998754
No 30
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.74 E-value=9.4e-18 Score=128.67 Aligned_cols=104 Identities=15% Similarity=0.036 Sum_probs=79.0
Q ss_pred EEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCce
Q 025996 55 AVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGI 134 (245)
Q Consensus 55 aV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~ 134 (245)
+|.+++++ .++ +|||+||+. |.|+||||++++|| ++.+||+||++||||+.+....+++.+....+....
T Consensus 4 ~~~~vi~~-~~~--~vLl~~r~~------g~w~~PgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~ 73 (126)
T 1vcd_A 4 GAGGVVFN-AKR--EVLLLRDRM------GFWVFPKGHPEPGE-SLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKGVE 73 (126)
T ss_dssp EEEEEEEC-TTS--CEEEEECTT------SCEECCEECCCTTC-CHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTSCE
T ss_pred EEEEEEEc-CCC--EEEEEEECC------CCccCCcCcCCCCC-CHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCceE
Confidence 45555565 355 799999874 78999999999999 999999999999999998888888877544444445
Q ss_pred EEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 135 IVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 135 ~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
.++.|.+..... . ..+.+|+.++.|+|++++.+.
T Consensus 74 ~~~~~~~~~~~~-~---~~~~~e~~~~~w~~~~el~~~ 107 (126)
T 1vcd_A 74 REVHWFLMRGEG-A---PRLEEGMTGAGWFSPEEARAL 107 (126)
T ss_dssp EEEEEEEEEEES-C---CCCCTTCCEEEEECHHHHHHH
T ss_pred EEEEEEEEEcCC-C---CCCCcceeeeEEcCHHHHHHh
Confidence 566666654432 1 234578999999999998763
No 31
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.74 E-value=4.2e-18 Score=140.51 Aligned_cols=104 Identities=25% Similarity=0.271 Sum_probs=77.4
Q ss_pred cEEEEEEEeCC-----CCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC-C-ceEEEEE
Q 025996 67 DLRVFLTKRSS-----NLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK-N-GIIVVPV 139 (245)
Q Consensus 67 ~~~vLL~rR~~-----~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~-~-~~~v~~~ 139 (245)
+.+|||++|+. ....++|.|+||||++|+|| ++++||+||++|||||.+..+.+++.+...... . ......|
T Consensus 45 ~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~ 123 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENE-SAEQAAERELEEETSLTDIPLIPFGVFDKPGRDPRGWIISRAF 123 (187)
T ss_dssp EEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTS-CHHHHHHHHHHHHHCCCSCCCEEEEEECCTTSSTTSSEEEEEE
T ss_pred CCEEEEEEEccccccccCCCCCCEEECCceeCCCCC-CHHHHHHHHHHHHHCCCCcceEEEEEEcCCccCCCCCEEEEEE
Confidence 45899999975 33478899999999999999 999999999999999999999999887654322 2 2333445
Q ss_pred EEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 140 IGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 140 v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
++.+... ......+.+|+.++.|++++++.+.
T Consensus 124 ~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~ 155 (187)
T 3i9x_A 124 YAIVPPE-ALEKRAAGDDAAEIGLFPMTEALEL 155 (187)
T ss_dssp EEECCHH-HHHHHHHSTTTTTEEEEEHHHHTTS
T ss_pred EEEEcCc-ccCCcCCCCceeEEEEEeHHHcccC
Confidence 5544321 1111234578999999999998753
No 32
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.73 E-value=7.5e-18 Score=133.44 Aligned_cols=111 Identities=12% Similarity=0.051 Sum_probs=80.4
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccC-
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTK- 131 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~- 131 (245)
+.+|.+++.. ++ +|||++|.... . +|.|+||||++|+|| ++.+||+||++||||+.+....+++.+......
T Consensus 8 ~~~v~~ii~~--~~--~vLl~~r~~~~-~-~~~w~lPgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 80 (153)
T 2b0v_A 8 NVTVAAVIEQ--DD--KYLLVEEIPRG-T-AIKLNQPAGHLEPGE-SIIQACSREVLEETGHSFLPEVLTGIYHWTCASN 80 (153)
T ss_dssp EEEEEEECEE--TT--EEEEEEECSSS-S-CCEEECSEEECCTTS-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTT
T ss_pred CEEEEEEEee--CC--EEEEEEEcCCC-C-CCeEECCCcCcCCCC-CHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCC
Confidence 4455554443 45 89999998753 3 889999999999999 999999999999999998888888776433322
Q ss_pred -CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 132 -NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 132 -~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
..+.++.|.+...... ....+.+|+.++.|++++++.+.
T Consensus 81 ~~~~~~~~f~~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 81 GTTYLRFTFSGQVVSFD--PDRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp TEEEEEEEEEEEEEEEC--TTSCCCTTEEEEEEEEHHHHHHT
T ss_pred CcEEEEEEEEEEeCCCC--CCCCCCCCeeeEEEecHHHHhhh
Confidence 1233445555544321 11345689999999999999873
No 33
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.73 E-value=8.7e-18 Score=130.00 Aligned_cols=104 Identities=25% Similarity=0.253 Sum_probs=77.5
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCC-
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKN- 132 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~- 132 (245)
.+|.+++++ ++ +|||++|.. |.|+||||++|+|| ++.+||+||++||||+.+....+++.+...++..
T Consensus 5 ~~~~~vi~~--~~--~vLl~~r~~------~~w~~PgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~ 73 (134)
T 2pbt_A 5 FSAGGVLFK--DG--EVLLIKTPS------NVWSFPKGNIEPGE-KPEETAVREVWEETGVKGEILDYIGEIHYWYTLKG 73 (134)
T ss_dssp EEEEEEEEE--TT--EEEEEECTT------SCEECCEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETT
T ss_pred eEEEEEEEE--CC--EEEEEEeCC------CcEECCccccCCCC-CHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCC
Confidence 344444554 45 899999865 89999999999999 9999999999999999998888888775554422
Q ss_pred ---ceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 133 ---GIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 133 ---~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
...++.|.+..... ...++ +|+.++.|++++++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~---~~~~~-~e~~~~~W~~~~el~~~ 112 (134)
T 2pbt_A 74 ERIFKTVKYYLMKYKEG---EPRPS-WEVKDAKFFPIKEAKKL 112 (134)
T ss_dssp EEEEEEEEEEEEEEEEE---CCCCC-TTSSEEEEEEHHHHHHH
T ss_pred cEEEEEEEEEEEEecCC---CcCCC-cceeEEEEEcHHHHHhh
Confidence 23445555555432 22333 39999999999998864
No 34
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.73 E-value=4.9e-17 Score=128.61 Aligned_cols=111 Identities=18% Similarity=0.127 Sum_probs=75.1
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcce-EE---EEeCCc-
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVN-VV---TILDPI- 128 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~-~l---g~l~~~- 128 (245)
.+|.++++...+++.+|||++|... |.|+||||++|+|| ++.+||+||++||||+.+.... .+ .....+
T Consensus 6 ~~v~vvi~~~~~~~~~vLl~~r~~~-----g~w~~PgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 79 (149)
T 3son_A 6 FQVLVIPFIKTEANYQFGVLHRTDA-----DVWQFVAGGGEDEE-AISETAKRESIEELNLDVDVKMYSLDSHASIPNFH 79 (149)
T ss_dssp CEEEEEEEEECSSSEEEEEEEESSS-----SCEECEEEECCTTC-CHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGG
T ss_pred eEEEEEEEEecCCCeEEEEEEEcCC-----CCEeCCccccCCCC-CHHHHHHHHHHHHhCCCcccceEEEEeeeccccee
Confidence 3444444432344458999999863 89999999999999 9999999999999999887541 11 112111
Q ss_pred c--c-CCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 129 F--T-KNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 129 ~--~-~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
+ . ......+.|.+.+... ...+.+ ++|+.++.|++++++.+.
T Consensus 80 ~~~~~~~~~~~~~f~~~~~~~-~~~~~~-~~E~~~~~W~~~~el~~~ 124 (149)
T 3son_A 80 FSFNKPYVVPEYCFAIDLTSC-SYQVTL-SLEHSELRWVSYESAIQL 124 (149)
T ss_dssp TCSSSCSEEEEEEEEEECTTT-GGGCCC-CTTEEEEEEECHHHHHHH
T ss_pred eccCCceEeEEEEEEEEcCCC-CCcccC-CCceeeEEEeCHHHHHHH
Confidence 1 1 1234455566665531 122334 489999999999998864
No 35
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.73 E-value=1.8e-17 Score=147.07 Aligned_cols=159 Identities=18% Similarity=0.230 Sum_probs=111.3
Q ss_pred CCchhHHHHHHHHhhcCCCCCCCccccccc--cc----cCcc----ccccCCCCCceEEEEEEEEcCCCcEEEEEEEeCC
Q 025996 8 DRSERLETLVQRLRLYNERHQNPVTEREAV--DS----QDSY----SVAVSSTKKRAAVLVCLFEGNDGDLRVFLTKRSS 77 (245)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~----~~~~~~~~r~aaV~v~l~~~~~g~~~vLL~rR~~ 77 (245)
.++..+..++++++.-.- -.-+++|.+ .. .... ++.+..+..+.+|.+.+++..+++.++|++||+.
T Consensus 66 ~rt~~~~~~~~~~~~~g~---~~gwr~E~~~V~~~~~~~~~~~~eR~~~~~~G~~~~~vh~~~~~~~~~~~~lll~rRs~ 142 (300)
T 3dup_A 66 SRTRAVADVVDRLADEGV---VPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSP 142 (300)
T ss_dssp HHHHHHHHHHHHHHHTTS---SCCCCSCEEEECSSTTSCCCEEEEGGGTGGGTCCEEEEEEEEEESCGGGCEEEEEEECT
T ss_pred HHHHHHHHHHHHHHHcCC---CCccccccEEeecCCCCeeeEEEEhhhccccceEEEEEEEEEEEecCCeeEEEEEeCCC
Confidence 345666777777776321 112334443 11 1112 4446678899999998888655567999999999
Q ss_pred CCCCCCCCc-cCCceecCCCCCCHHHHHHHHHHHHHCCCCCc---ceEEEEeCCccc-CCc---eEEEEEEEEeCCCCCC
Q 025996 78 NLSSHSGEV-ALPGGKREENDADDAGTALREAKEEIGLDPSL---VNVVTILDPIFT-KNG---IIVVPVIGILPDRNSF 149 (245)
Q Consensus 78 ~~~~~~G~w-~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~---~~~lg~l~~~~~-~~~---~~v~~~v~~~~~~~~~ 149 (245)
.|..|||+| .++||++++|| ++.+||+||++||+||+... +..++.+...+. ..+ ..++.|.+.+.. +.
T Consensus 143 ~K~~~PG~wd~svaG~i~~GE-s~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~--~~ 219 (300)
T 3dup_A 143 DKSVAPGKLDNMVAGGQPADL-SLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPE--DF 219 (300)
T ss_dssp TCSSSTTCEEESEEEECCTTS-CHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEEECCT--TC
T ss_pred cccCCCCccccccccCCCCCC-CHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEEEecC--CC
Confidence 999999999 69999999999 99999999999999998643 344555443321 122 233344444443 44
Q ss_pred CCCCCcccceeEEEEcccccccc
Q 025996 150 IPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 150 ~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
.+.++++||+++.|+|++++.+.
T Consensus 220 ~p~~~~~EV~~~~~v~~~El~~~ 242 (300)
T 3dup_A 220 RPHNTDGEMADFMLWPAAKVVEA 242 (300)
T ss_dssp CCCCTTSSEEEEEEEEHHHHHHH
T ss_pred cCCCCchHhheEEEECHHHHHHH
Confidence 55789999999999999999874
No 36
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.73 E-value=1.2e-17 Score=138.64 Aligned_cols=115 Identities=16% Similarity=0.103 Sum_probs=83.1
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCC----CC-CCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNL----SS-HSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDP 127 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~----~~-~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~ 127 (245)
..+|++++++..++ ++||+++.... +. +++.|+||||++| || ++++||+||++||||+.+..+..++.+..
T Consensus 45 ~~av~v~~~~~~~~--~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE-~~~~aa~REl~EEtG~~~~~~~~l~~~~~ 120 (191)
T 3o6z_A 45 GNGATILLYNTKKK--TVVLIRQFRVATWVNGNESGQLIESCAGLLD-ND-EPEVCIRKEAIEETGYEVGEVRKLFELYM 120 (191)
T ss_dssp CCEEEEEEEETTTT--EEEEEEEECHHHHTTTCTTCEEEECEEEECC-SS-CHHHHHHHHHHHHC-CCCSCEEEEEEEES
T ss_pred CCEEEEEEEECCCC--EEEEEEcCCccccccCCCCCeEEEecceEeC-CC-CHHHHHHHHHHHHhCCccCcEEEEEEEEe
Confidence 44555556653345 78888775421 11 6789999999999 99 99999999999999999999999988766
Q ss_pred cccCCceEEEEEEEEeCCCCCCC--CCCCcccceeEEEEcccccccc
Q 025996 128 IFTKNGIIVVPVIGILPDRNSFI--PAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 128 ~~~~~~~~v~~~v~~~~~~~~~~--~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
........++.|++......... ..+ ++|+.++.|+|++++.+.
T Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~el~~~ 166 (191)
T 3o6z_A 121 SPGGVTELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQALEM 166 (191)
T ss_dssp CTTTBCCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHH
T ss_pred CCCccCcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHHHHHH
Confidence 55555667888888765421111 122 689999999999998764
No 37
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.73 E-value=3.8e-18 Score=131.06 Aligned_cols=101 Identities=21% Similarity=0.295 Sum_probs=79.3
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCceEEEEEEEEe
Q 025996 64 NDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGIIVVPVIGIL 143 (245)
Q Consensus 64 ~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~~v~~~v~~~ 143 (245)
.++ +|||++|+.. +.++|.|+||||++++|| ++.+||+||++||||+.+.....++.+...++.....++.|.+..
T Consensus 14 ~~~--~vLl~~r~~~-~~~~g~w~~PgG~~e~gE-~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (129)
T 1mut_A 14 ENN--EIFITRRAAD-AHMANKLEFPGGKIEMGE-TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVER 89 (129)
T ss_dssp TTT--EEEEEECSSC-CSSSCCEECCCCCSSSCS-STTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCEEEEE
T ss_pred cCC--EEEEEEeCCC-CCCCCeEECCccCcCCCC-CHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEEEEEc
Confidence 355 8999999876 478999999999999999 999999999999999998877777766655554444555666665
Q ss_pred CCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 144 PDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 144 ~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
... .++.+|+.++.|++++++.+..
T Consensus 90 ~~~-----~~~~~e~~~~~W~~~~el~~~~ 114 (129)
T 1mut_A 90 WEG-----EPWGKEGQPGEWMSLVGLNADD 114 (129)
T ss_dssp CSS-----CCCCCSSCCCEEEESSSCCTTT
T ss_pred cCC-----ccCCcccceeEEeCHHHccccc
Confidence 432 2345788999999999987643
No 38
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.72 E-value=1.6e-17 Score=140.08 Aligned_cols=118 Identities=14% Similarity=0.168 Sum_probs=81.0
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKN 132 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~ 132 (245)
.+++++++..+.++..+|||+++.+. ...++.|+||||++|+|| ++++||+||++||||+.+..+.+++.+.......
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~-~~~~~~welPgG~ve~gE-s~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~ 139 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRP-PMGGYCIEFPAGLIDDGE-TPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 139 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEG-GGTEEEEECCEEECCTTC-CHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTB
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecC-CCCCcEEECCccccCCCC-CHHHHHHHHHHHHhCCCccceEEeccEEcCCCcc
Confidence 34444555543222347888775432 134678999999999999 9999999999999999987776665543322333
Q ss_pred ceEEEEEEEEeCCCCC----CCCCCCcccceeEEEEcccccccc
Q 025996 133 GIIVVPVIGILPDRNS----FIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 133 ~~~v~~~v~~~~~~~~----~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
...++.|++.+..... ....++++|+.++.|+|++++.+.
T Consensus 140 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 183 (212)
T 2dsc_A 140 NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQR 183 (212)
T ss_dssp CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHH
T ss_pred CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 4456677776543211 123467889999999999999764
No 39
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.71 E-value=3.1e-17 Score=130.41 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=77.4
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCccc-C
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFT-K 131 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~-~ 131 (245)
+.+|.+++.+...+++.||+++|... .++| |+||||++|+|| ++.+||+||++||||+.+....+++......+ .
T Consensus 8 ~~~~~~ii~~~~~~~~~vLl~~r~~~--~~~g-w~lPgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 83 (155)
T 2b06_A 8 ILTNICLIEDLETQRVVMQYRAPENN--RWSG-YAFPGGHVENDE-AFAESVIREIYEETGLTIQNPQLVGIKNWPLDTG 83 (155)
T ss_dssp EEEEEEEEEETTTTEEEEEEEC-------CCE-EECCCCBCCTTS-CHHHHHHHHHHHHHSEEEESCEEEEEEEEECTTS
T ss_pred EEEEEEEEEECCCCeEEEEEEECCCC--CCCC-EeccceecCCCC-CHHHHHHHHHHHHhCccccCCcEEEEEeeccCCC
Confidence 45555555653334456999999876 3788 999999999999 99999999999999999888888877654432 2
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
....++.|.+.... . .+++.|+.++.|++++++.+..
T Consensus 84 ~~~~~~~~~~~~~~---~--~~~~~e~~~~~W~~~~el~~~~ 120 (155)
T 2b06_A 84 GRYIVICYKATEFS---G--TLQSSEEGEVSWVQKDQIPNLN 120 (155)
T ss_dssp CEEEEEEEEECEEE---E--CCCCBTTBEEEEEEGGGGGGSC
T ss_pred ceEEEEEEEEEecC---C--CCCCCcceeeEEeeHHHhhhCC
Confidence 23344444443322 1 2345789999999999998743
No 40
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.71 E-value=4.4e-17 Score=139.09 Aligned_cols=157 Identities=15% Similarity=0.122 Sum_probs=103.8
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCccc-C
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFT-K 131 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~-~ 131 (245)
..+|.++++...+++.+|||++|... +++|.|+||||++|+|| |+++||+||++||||+.+..++.++.+..... .
T Consensus 13 ~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lPGG~ve~gE-s~~~Aa~REl~EEtGl~~~~~~~l~~~~~~~r~~ 89 (226)
T 2fb1_A 13 YLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLMGGFVQKDE-SVDDAAKRVLAELTGLENVYMEQVGAFGAIDRDP 89 (226)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECEEEECCTTS-CHHHHHHHHHHHHHCCCSCEEEEEEEECCTTSSS
T ss_pred eEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECCeeccCCCC-CHHHHHHHHHHHHHCCCCCceEEEEEeCCCCcCC
Confidence 45555555532244569999999874 67899999999999999 99999999999999999998888888864332 2
Q ss_pred Cc-eEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccCCCcee------EEEEeCeEE-EEEEEEeecCCCceEE
Q 025996 132 NG-IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDENRRAE------EREWMGYKY-LLHFFDYEAEGNKYVI 203 (245)
Q Consensus 132 ~~-~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~i 203 (245)
.+ .....|++.+... ....+.+|+.++.|+|++++.+....... ........+ .+.++.++
T Consensus 90 ~~~~v~~~y~a~~~~~---~~~~~~~e~~~~~W~~~~el~~l~~dh~~il~~a~~rlr~~~~y~~i~~~llp-------- 158 (226)
T 2fb1_A 90 GERVVSIAYYALININ---EYDRELVQKHNAYWVNINELPALIFDHPEMVDKAREMMKQKASVEPIGFNLLP-------- 158 (226)
T ss_dssp SSCEEEEEEEEECCTT---SSCHHHHHHTTEEEEETTSCCCBSTTHHHHHHHHHHHHHHHHHHSGGGGGGSC--------
T ss_pred CceEEEEEEEEEecCc---ccccCCccccceEEEEHHHhhhccCCHHHHHHHHHHHHHhhcccCchHHHhCC--------
Confidence 22 3333566665432 12234578999999999998764321100 000000000 01111111
Q ss_pred echhHHHHHHHHHHHhCCCC
Q 025996 204 WALTAGILINVASVVHQCPP 223 (245)
Q Consensus 204 WG~Ta~il~~~~~~~~~~~p 223 (245)
--+|...|.++.+.++|++.
T Consensus 159 ~~ftl~~l~~~ye~~~~~~~ 178 (226)
T 2fb1_A 159 KLFTLSQLQSLYEAIYGEPM 178 (226)
T ss_dssp SEEEHHHHHHHHHHHHTSCC
T ss_pred ccccHHHHHHHHHHHhCCCC
Confidence 14689999999999999876
No 41
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.71 E-value=2.9e-17 Score=138.41 Aligned_cols=117 Identities=17% Similarity=0.038 Sum_probs=81.0
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCC--C--CCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCc
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNL--S--SHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPI 128 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~--~--~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~ 128 (245)
..+|++++++..++ +|||+++.+.. . ..++.|+||||++|+|| ++++||+||++||||+.+..+..++.+...
T Consensus 57 ~~av~vl~~~~~~~--~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE-~~~~aA~REl~EEtGl~~~~~~~l~~~~~~ 133 (209)
T 1g0s_A 57 GHAAVLLPFDPVRD--EVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGE-SVEDVARREAIEEAGLIVKRTKPVLSFLAS 133 (209)
T ss_dssp CCEEEEEEEETTTT--EEEEEEEECGGGGGGSSCSEEEECEEEECCTTC-CHHHHHHHHHHHHHCCCCCCEEEEEEEESC
T ss_pred CCEEEEEEEECCCC--EEEEEEeecccCCCCCCCCeEEEeCcccCCCCc-CHHHHHHHHHHHHcCcccCcEEEeEEEecC
Confidence 34666666663345 78886643321 1 12578999999999999 999999999999999999989988887544
Q ss_pred ccCCceEEEEEEEEeCCCC-CC-CCCCCcccceeEEEEcccccccc
Q 025996 129 FTKNGIIVVPVIGILPDRN-SF-IPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 129 ~~~~~~~v~~~v~~~~~~~-~~-~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
.......++.|++.+.... .. ....+++|+.++.|+|++++.+.
T Consensus 134 ~g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~ 179 (209)
T 1g0s_A 134 PGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQW 179 (209)
T ss_dssp TTTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHH
T ss_pred CCccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHH
Confidence 4444456777888753211 11 12356788999999999998763
No 42
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=141.33 Aligned_cols=118 Identities=20% Similarity=0.079 Sum_probs=81.3
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCC------------------------------CCCCCCccCCceecCC-CCCCH
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNL------------------------------SSHSGEVALPGGKREE-NDADD 100 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~------------------------------~~~~G~w~fPGG~ve~-gE~s~ 100 (245)
++.+|+|++++..++ +|||+|+.+.. ...++.|+||||++|+ || ++
T Consensus 35 ~~~aV~vl~~~~~~~--~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gE-s~ 111 (218)
T 3q91_A 35 THDSVTVLLFNSSRR--SLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGL-SL 111 (218)
T ss_dssp CCCEEEEEEEEGGGT--EEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSC-CH
T ss_pred cCCeEEEEEEECCCC--EEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCC-CH
Confidence 356777777764344 78887653311 1126799999999999 99 99
Q ss_pred HHHHHHHHHHHHCCCC--CcceEEEEeCCcccCCceEEEEEEEEeCCCC---CCCCCCCcccceeEEEEcccccccc
Q 025996 101 AGTALREAKEEIGLDP--SLVNVVTILDPIFTKNGIIVVPVIGILPDRN---SFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 101 ~~aA~REl~EEtGl~~--~~~~~lg~l~~~~~~~~~~v~~~v~~~~~~~---~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
++||+||++||||+.+ ..+..++.+.......+..++.|++.+.... .....++++|+.++.|+|++++.+.
T Consensus 112 ~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~ 188 (218)
T 3q91_A 112 EEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVVHLPLEGAQAF 188 (218)
T ss_dssp HHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------CCEEEEEEEGGGHHHH
T ss_pred HHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCCcEEEEEEEEHHHHHHH
Confidence 9999999999999998 7888888765544455667888888875321 1123567889999999999998764
No 43
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.70 E-value=1.6e-16 Score=124.17 Aligned_cols=106 Identities=23% Similarity=0.231 Sum_probs=77.4
Q ss_pred ceEEEEEEEE-cCCCcEE--EEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc
Q 025996 53 RAAVLVCLFE-GNDGDLR--VFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF 129 (245)
Q Consensus 53 ~aaV~v~l~~-~~~g~~~--vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~ 129 (245)
..+|.+++++ +.+| + |||++|... ++.|+||||++|+|| ++.+||+||++||||+.+....+++.+....
T Consensus 9 ~~~v~~vi~~~~~~~--~~~vLl~~r~~~----~~~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 81 (139)
T 2yyh_A 9 LLATDVIIRLWDGEN--FKGIVLIERKYP----PVGLALPGGFVEVGE-RVEEAAAREMREETGLEVRLHKLMGVYSDPE 81 (139)
T ss_dssp EEEEEEEEEEEETTE--EEEEEEEEECSS----SCSEECCEEECCTTC-CHHHHHHHHHHHHHCCCCEEEEEEEEECCTT
T ss_pred eEEEEEEEEEEcCCC--cEEEEEEEecCC----CCcEECccccCCCCC-CHHHHHHHHHHHHHCCCcccceEEEEECCCC
Confidence 3444444443 1234 5 999999754 345999999999999 9999999999999999998888888776532
Q ss_pred cC--CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccc
Q 025996 130 TK--NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFL 170 (245)
Q Consensus 130 ~~--~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~ 170 (245)
.. ....++.|.+.... . +. .++|+.++.|++++++.
T Consensus 82 ~~~~~~~~~~~f~~~~~~--~--~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 82 RDPRAHVVSVVWIGDAQG--E--PK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp SCTTSCEEEEEEEEEEES--C--CC-CCTTEEEEEEECTTSCC
T ss_pred cCCCceEEEEEEEEecCC--c--cC-CCCCcceEEEEEHHHCC
Confidence 21 23455566666632 1 22 45799999999999988
No 44
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.70 E-value=3.6e-17 Score=130.71 Aligned_cols=111 Identities=21% Similarity=0.248 Sum_probs=76.0
Q ss_pred CCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCC---
Q 025996 51 KKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDP--- 127 (245)
Q Consensus 51 ~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~--- 127 (245)
..+.+|.+++++ .++ +|||++|.. ++|.|+||||++|+|| ++++||+||++|||||.+..+ +.....
T Consensus 12 ~~~~~v~~~i~~-~~~--~vLl~~r~~----~~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~--~~~~~~~~~ 81 (165)
T 1f3y_A 12 GYRRNVGICLMN-NDK--KIFAASRLD----IPDAWQMPQGGIDEGE-DPRNAAIRELREETGVTSAEV--IAEVPYWLT 81 (165)
T ss_dssp SCCCEEEEEEEC-TTS--CEEEEEETT----EEEEEECCEEECCTTC-CHHHHHHHHHHHHHCCCSEEE--EEECSSCCB
T ss_pred ceeeeEEEEEEC-CCC--cEEEEecCC----CCCcEECCeeccCCCC-CHHHHHHHHHHHhhCCChhhh--hccccccee
Confidence 334555555665 355 799999974 3589999999999999 999999999999999987533 222211
Q ss_pred -cccC--------------CceEEEEEEEEeCCCCCCCCCC-----CcccceeEEEEcccccccc
Q 025996 128 -IFTK--------------NGIIVVPVIGILPDRNSFIPAP-----NTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 128 -~~~~--------------~~~~v~~~v~~~~~~~~~~~~~-----~~~Ev~~v~wvpl~el~~~ 172 (245)
.+.. .+..++.|++.+... ...+.+ +++|+.++.|++++++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 145 (165)
T 1f3y_A 82 YDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQ-DQEINLLGDGSEKPEFGEWSWVTPEQLIDL 145 (165)
T ss_dssp CCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSC-GGGCCCCCCSSSCCSEEEEEEECHHHHHHH
T ss_pred eecCccccccccccccccccCceEEEEEEEecCC-cccccccCCCCCCChhheeEEecHHHHHHH
Confidence 1110 112455677766542 112222 3679999999999999874
No 45
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.70 E-value=1.3e-17 Score=140.07 Aligned_cols=114 Identities=18% Similarity=0.115 Sum_probs=76.9
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecC-CCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCC
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKRE-ENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKN 132 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve-~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~ 132 (245)
.+|.+++++ .++ +|||++|.... .++|.|+||||++| +|| ++++||+||++||||+.+..+.+++.+.......
T Consensus 44 ~av~v~i~~-~~~--~vLLvrr~r~~-~~~~~w~lPgG~ve~~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 118 (207)
T 1mk1_A 44 GAVAIVAMD-DNG--NIPMVYQYRHT-YGRRLWELPAGLLDVAGE-PPHLTAARELREEVGLQASTWQVLVDLDTAPGFS 118 (207)
T ss_dssp CEEEEEECC-TTS--EEEEEEEEETT-TTEEEEECCEEECCSTTC-CHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTB
T ss_pred CEEEEEEEc-CCC--EEEEEEeecCC-CCCcEEEeCCccccCCCC-CHHHHHHHHHHHHHCCcccccEEEEEEEcCCCcc
Confidence 456665665 455 89999887652 56789999999999 999 9999999999999999998888887763333222
Q ss_pred ceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 133 GIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 133 ~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
...++.|++............+++|+.++.|++++++.+.
T Consensus 119 ~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 158 (207)
T 1mk1_A 119 DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARR 158 (207)
T ss_dssp CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHH
T ss_pred ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 3345666665432211111246789999999999999764
No 46
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.69 E-value=6.2e-17 Score=127.24 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=74.4
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCc-cc-
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPI-FT- 130 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~-~~- 130 (245)
+.+|.+++++..++ +|||++|. +|.|+||||++|+|| ++.+||+||++||||+.+....+++.+..+ +.
T Consensus 18 ~~~~~~vi~~~~~~--~vLl~~r~------~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 88 (148)
T 2azw_A 18 RYAAYIIVSKPENN--TMVLVQAP------NGAYFLPGGEIEGTE-TKEEAIHREVLEELGISVEIGCYLGEADEYFYSN 88 (148)
T ss_dssp CCEEEEECEEGGGT--EEEEEECT------TSCEECSEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEET
T ss_pred eeEEEEEEECCCCC--eEEEEEcC------CCCEeCCCcccCCCC-CHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCC
Confidence 34455555653245 89999974 279999999999999 999999999999999998887777765322 11
Q ss_pred C----CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 131 K----NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 131 ~----~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
. ....++.|.+..... . ....+|+.++.|++++++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~---~-~~~~~e~~~~~W~~~~el~~~ 130 (148)
T 2azw_A 89 HRQTAYYNPGYFYVANTWRQ---L-SEPLERTNTLHWVAPEEAVRL 130 (148)
T ss_dssp TTTEEEEEEEEEEEEEEEEE---C-SSCC-CCSEEEEECHHHHHHH
T ss_pred CCCcceEEEEEEEEEEcCcC---C-cCCCCceeeEEEeeHHHHHhh
Confidence 1 112344455544321 1 123478899999999998764
No 47
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.69 E-value=1.2e-16 Score=125.48 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=77.2
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcc--eEEEEeCC---
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLV--NVVTILDP--- 127 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~--~~lg~l~~--- 127 (245)
..+|.+++++..+| +|||++|+.. +|.|+||||++|+|| ++.+||+||++||||+.+... .+++....
T Consensus 9 ~~~v~~~i~~~~~~--~vLl~~r~~~----~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 81 (150)
T 2o1c_A 9 PVSILVVIYAQDTK--RVLMLQRRDD----PDFWQSVTGSVEEGE-TAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEF 81 (150)
T ss_dssp SEEEEEEEEETTTC--EEEEEECSSS----TTCEESEEEECCTTC-CHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEE
T ss_pred ceEEEEEEEeCCCC--EEEEEEecCC----CCceECCccccCCCC-CHHHHHHHHHHHHhCCCccccceeEEeeeceeee
Confidence 35666666663235 8999998764 689999999999999 999999999999999987653 34443211
Q ss_pred --------ccc--CCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 128 --------IFT--KNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 128 --------~~~--~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
.+. .....++.|.+.+.... ....+|+.++.|++++++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~----~~~~~E~~~~~W~~~~el~~~ 132 (150)
T 2o1c_A 82 EIFSHLRHRYAPGVTRNTESWFCLALPHER----QIVFTEHLAYKWLDAPAAAAL 132 (150)
T ss_dssp ECCGGGGGGBCTTCCEEEEEEEEEEESSCC----CCCCSSSSCEEEEEHHHHHHH
T ss_pred eeecccccccCCCCcceEEEEEEEEcCCCC----CcChhHhhccEeecHHHHHhh
Confidence 011 12345566666665421 123489999999999998764
No 48
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.69 E-value=1.5e-16 Score=126.80 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=76.9
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHH-HHHHHHHHHHHC-CCCCcceEEEEeCCcccCCceEEEEEEEEeCCC
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDA-GTALREAKEEIG-LDPSLVNVVTILDPIFTKNGIIVVPVIGILPDR 146 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~-~aA~REl~EEtG-l~~~~~~~lg~l~~~~~~~~~~v~~~v~~~~~~ 146 (245)
+|||+||... +.++|.|+||||++|.|| ++. +||+||++|||| +.+.....++.+.+.++.....++.|.+.+...
T Consensus 35 ~vLl~~R~~~-~~~~g~w~~PgG~~e~gE-~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 112 (155)
T 1x51_A 35 QILLVQRPNS-GLLAGLWEFPSVTWEPSE-QLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQ 112 (155)
T ss_dssp EEEEEECCCC-STTCSCEECCEEECCSSH-HHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBCSSCEEEEEEEEEECSSC
T ss_pred EEEEEECCCC-CCCCceecCCccccCCCC-CHHHHHHHHHHHHHhCCcceeeeeecceEEEecCCccEEEEEEEEEEcCC
Confidence 8999999875 578999999999999999 886 999999999999 888777777777666665556666776665432
Q ss_pred CCCCCCCCcccceeEEEEccccccc
Q 025996 147 NSFIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 147 ~~~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
.+...|..++.|++++++.+
T Consensus 113 -----~~~~~e~~~~~W~~~~el~~ 132 (155)
T 1x51_A 113 -----TPVTTVPPGARWLTQEEFHT 132 (155)
T ss_dssp -----CCCCCCCTTEEEEEHHHHHH
T ss_pred -----CCCCCCCCccEEccHHHhhh
Confidence 12345778899999999875
No 49
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.69 E-value=9.4e-17 Score=134.82 Aligned_cols=105 Identities=25% Similarity=0.296 Sum_probs=77.7
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc---
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF--- 129 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~--- 129 (245)
+.+|.+++++ +| +|||++|. +|.|+||||++|+|| ++.+||+||++||||+.+....+++.+....
T Consensus 70 ~~~v~~vv~~--~~--~vLLvrr~------~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 138 (206)
T 3o8s_A 70 KLDTRAAIFQ--ED--KILLVQEN------DGLWSLPGGWCDVDQ-SVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNP 138 (206)
T ss_dssp EEEEEEEEEE--TT--EEEEEECT------TSCEECSEEECCTTS-CHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC
T ss_pred CccEEEEEEE--CC--EEEEEEec------CCeEECCeeccCCCC-CHHHHHHHHHHHHHCCcceeeeEEEEEeccccCC
Confidence 4556555665 35 89999988 489999999999999 9999999999999999998888888775321
Q ss_pred c--CCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 130 T--KNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 130 ~--~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
. ........|.+.+... .+.++ +|+.++.|++++++.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~---~~~~~-~E~~~~~w~~~~el~~l 179 (206)
T 3o8s_A 139 AKSAHRVTKVFILCRLLGG---EFQPN-SETVASGFFSLDDLPPL 179 (206)
T ss_dssp -----CEEEEEEEEEEEEE---CCCCC-SSCSEEEEECTTSCCCB
T ss_pred CCCCceEEEEEEEEEecCC---eecCC-CCceEEEEEeHHHhhhc
Confidence 1 1233444555554432 23344 89999999999998764
No 50
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.68 E-value=4.4e-17 Score=140.34 Aligned_cols=156 Identities=23% Similarity=0.229 Sum_probs=102.9
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCC--CCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCccc-
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREE--NDADDAGTALREAKEEIGLDPSLVNVVTILDPIFT- 130 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~--gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~- 130 (245)
.+|.++++...+++.+|||++|... +++|.|+||||++|+ || |+.+||+||++||||+.+..++.++.+.....
T Consensus 23 v~v~~vi~~~~~~~~~vLLv~R~~~--~~~g~W~lPGG~ve~~~gE-s~~~AA~REl~EEtGl~~~~~~~l~~~~~~~r~ 99 (240)
T 3gz5_A 23 LTVDAVLFTYHDQQLKVLLVQRSNH--PFLGLWGLPGGFIDETCDE-SLEQTVLRKLAEKTAVVPPYIEQLCTVGNNSRD 99 (240)
T ss_dssp EEEEEEEEEEETTEEEEEEEECCSS--SSTTCEECSEEECCTTTCS-BHHHHHHHHHHHHHSSCCSEEEEEEEEEESSSS
T ss_pred cEEEEEEEEEeCCCcEEEEEECcCC--CCCCCEECCccccCCCCCc-CHHHHHHHHHHHHHCCCCCceeeEEEeCCCccC
Confidence 4554444432345679999999864 678999999999999 99 99999999999999999998888888765432
Q ss_pred C-CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccCCCcee------EEE-EeC-eEE-EEEEEEeecCCCc
Q 025996 131 K-NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDENRRAE------ERE-WMG-YKY-LLHFFDYEAEGNK 200 (245)
Q Consensus 131 ~-~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~~~~~~------~~~-~~~-~~~-~~~~~~~~~~~~~ 200 (245)
. .......|++.+... ....+.+|+.++.|+|++++.+......+ ... ..+ ..+ .+.+..++.
T Consensus 100 ~~~~~~~~~y~a~~~~~---~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl~y~~i~~~llp~---- 172 (240)
T 3gz5_A 100 ARGWSVTVCYTALMSYQ---ACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKALYSLVPGFALSE---- 172 (240)
T ss_dssp TTSCEEEEEEEEECCHH---HHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHHHHCSGGGGGSCS----
T ss_pred CCceEEEEEEEEEeccc---ccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhcccCcHHHHhCCC----
Confidence 2 233444566655431 12224678999999999999643221100 000 000 000 011111111
Q ss_pred eEEechhHHHHHHHHHHHhCCCC
Q 025996 201 YVIWALTAGILINVASVVHQCPP 223 (245)
Q Consensus 201 ~~iWG~Ta~il~~~~~~~~~~~p 223 (245)
-+|...|..+.+.++|++.
T Consensus 173 ----~Ftl~~l~~~ye~i~g~~~ 191 (240)
T 3gz5_A 173 ----PFTLPELQHVHEVLLGKPI 191 (240)
T ss_dssp ----SBCHHHHHHHHHHHHTSCC
T ss_pred ----CccHHHHHHHHHHHcCCcC
Confidence 3799999999999999875
No 51
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.67 E-value=9.8e-16 Score=123.98 Aligned_cols=111 Identities=17% Similarity=0.127 Sum_probs=81.3
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc--
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF-- 129 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~-- 129 (245)
.+.+|.+++++ .++ +|||++|.. +|.|+||||++|+|| ++.+||+||++||||+.+..+.+++.....+
T Consensus 7 ~~~~v~~~i~~-~~~--~vLl~~r~~-----~~~w~~p~G~~e~gE-~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~ 77 (164)
T 2kdv_A 7 YRPNVGIVICN-RQG--QVMWARRFG-----QHSWQFPQGGINPGE-SAEQAMYRELFEEVGLSRKDVRILASTRNWLRY 77 (164)
T ss_dssp EEEEEEEEEEC-TTS--EEEEEEETT-----CCCEECCEEECCTTC-CHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEE
T ss_pred CCcEEEEEEEc-cCC--EEEEEEEcC-----CCeEECCeeecCCCC-CHHHHHHHHHHHHHCCCccceEEEEEecceeEE
Confidence 35566666675 355 899999874 489999999999999 9999999999999999998888888865321
Q ss_pred --c-----------CCceEEEEEEEEeCCCCCCCCCCC---cccceeEEEEcccccccc
Q 025996 130 --T-----------KNGIIVVPVIGILPDRNSFIPAPN---TAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 130 --~-----------~~~~~v~~~v~~~~~~~~~~~~~~---~~Ev~~v~wvpl~el~~~ 172 (245)
. ..+..++.|++.+.... ....++ .+|+.++.|++++++.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 78 KLPKRLVRWDTKPVCIGQKQKWFLLQLVSGD-AEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp ECCTTTCCTTSSSCCCEEEEEEEEEEESSCG-GGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred ecCcceeeeccCcccccceeEEEEEEecCCc-cccccCCCCCchhceEEEecHHHhhhh
Confidence 0 01234566777665421 122232 359999999999988753
No 52
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.67 E-value=2.7e-16 Score=135.10 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=85.7
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCC-ceecCCC------CCC---HHHHHHHHHHHHHCCCCC--
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALP-GGKREEN------DAD---DAGTALREAKEEIGLDPS-- 117 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fP-GG~ve~g------E~s---~~~aA~REl~EEtGl~~~-- 117 (245)
+..+.+|.+++++ .+| +|||+||+..+..+||.|++| ||++++| | + +.+||+||++|||||++.
T Consensus 56 g~~h~av~v~v~~-~~g--~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E-~~~~~~~Aa~REl~EElGi~~~~v 131 (235)
T 2dho_A 56 GLLHRAFSVFLFN-TEN--KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEES-DALGVRRAAQRRLKAELGIPLEEV 131 (235)
T ss_dssp TCCEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCG-GGHHHHHHHHHHHHHHHCCCGGGS
T ss_pred CceEEEEEEEEEc-CCC--EEEEEEecCcCCCCCCcEEeccCceecCCCcccccc-cchhHHHHHHHHHHHHHCCCcccc
Confidence 5677788887776 456 799999999887899999999 5999999 6 6 499999999999999865
Q ss_pred ---cceEEEEeCCccc-CCc----eEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccc
Q 025996 118 ---LVNVVTILDPIFT-KNG----IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 118 ---~~~~lg~l~~~~~-~~~----~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
.+.+++.+..... ..+ ..++.|++... ..+.++++|+.++.|++++++.+
T Consensus 132 ~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~----~~~~~~~~Ev~~~~wv~~~el~~ 189 (235)
T 2dho_A 132 PPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMN----VTLNPDPNEIKSYCYVSKEELKE 189 (235)
T ss_dssp CGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECC----CCCCCCTTTEEEEEEECHHHHHH
T ss_pred ChhhcEEEEEEEEeccCCCccceeEEEEEEEEEEC----CCCcCChHHEEEEEEEcHHHHHH
Confidence 3567776543221 111 23344555442 23457889999999999999876
No 53
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.67 E-value=7.1e-16 Score=127.51 Aligned_cols=105 Identities=18% Similarity=0.069 Sum_probs=78.6
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKN 132 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~ 132 (245)
+.+|.+++++ ++ +|||++|... ..+|.|+||||++|+|| ++++||+||++||||+.+....+++.... ...
T Consensus 40 ~~~v~~ii~~--~~--~vLL~~r~~~--~~~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~--~~~ 110 (189)
T 3cng_A 40 KVIVGCIPEW--EN--KVLLCKRAIA--PYRGKWTLPAGFMENNE-TLVQGAARETLEEANARVEIRELYAVYSL--PHI 110 (189)
T ss_dssp EEEEEEEEEE--TT--EEEEEEESSS--SSTTCEECSEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEEE--GGG
T ss_pred ceEEEEEEEe--CC--EEEEEEccCC--CCCCeEECceeeccCCC-CHHHHHHHHHHHHHCCccccceeEEEEec--CCC
Confidence 3455555554 45 8999999875 34789999999999999 99999999999999999876666655322 223
Q ss_pred ceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccc
Q 025996 133 GIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFL 170 (245)
Q Consensus 133 ~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~ 170 (245)
...++.|.+..... .+. ..+|+.++.|++++++.
T Consensus 111 ~~~~~~f~~~~~~~---~~~-~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 111 SQVYMLFRAKLLDL---DFF-PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp TEEEEEEEEEECCS---CCC-CCTTEEEEEEECTTTCC
T ss_pred cEEEEEEEEEeCCC---ccC-CCccceeEEEECHHHcC
Confidence 45566677766542 122 35789999999999987
No 54
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.67 E-value=3.6e-16 Score=135.28 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=85.6
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCc-eecCCC------CCCH---HHHHHHHHHHHHCCCCC--
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPG-GKREEN------DADD---AGTALREAKEEIGLDPS-- 117 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPG-G~ve~g------E~s~---~~aA~REl~EEtGl~~~-- 117 (245)
+..+.+|.+++++ .+| +|||+||+..+..+||.|++|+ |++++| | ++ .+||+||++|||||++.
T Consensus 67 g~~h~av~v~v~~-~~g--~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~E-t~~~~~eAA~REl~EElGi~~~~v 142 (246)
T 2pny_A 67 GLLHRAFSVVLFN-TKN--RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEK-DAIGVRRAAQRRLQAELGIPGEQI 142 (246)
T ss_dssp TCCEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCG-GGHHHHHHHHHHHHHHHCCCTTTC
T ss_pred CcEEEEEEEEEEe-CCC--EEEEEEecCCCCCCCCceEeccCceeccCCcccccc-cchhHHHHHHHHHHHHHCCCcccc
Confidence 5667788887776 456 7999999998878999999995 999999 7 76 99999999999999875
Q ss_pred ---cceEEEEeCCccc-CCc----eEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccc
Q 025996 118 ---LVNVVTILDPIFT-KNG----IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 118 ---~~~~lg~l~~~~~-~~~----~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
.+.+++.+..... ..+ ..++.|++... ..+.++++|+.++.|++++++.+
T Consensus 143 ~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~----~~~~~~~~Ev~~~~wv~~eel~~ 200 (246)
T 2pny_A 143 SPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKN----VTLNPDPSETKSILYLSQEELWE 200 (246)
T ss_dssp CGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECC----CCCCCCTTTEEEEEEECHHHHHH
T ss_pred CccccEEEEEEEEEecCCCceeeeEEEEEEEEEEC----CCCCCChHHeeEEEEEeHHHHHH
Confidence 3566776543221 111 23344555432 23457889999999999999876
No 55
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.67 E-value=1.7e-16 Score=126.10 Aligned_cols=106 Identities=16% Similarity=0.250 Sum_probs=75.0
Q ss_pred eEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCc
Q 025996 54 AAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNG 133 (245)
Q Consensus 54 aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~ 133 (245)
.+|.+++++ ++ +|||++| +|.|+||||++++|| ++.+||+||++||||+.+...++++.....+...+
T Consensus 20 ~~~~~ii~~--~~--~vLl~~r-------~~~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 87 (154)
T 2pqv_A 20 VRATALIVQ--NH--KLLVTKD-------KGKYYTIGGAIQVNE-STEDAVVREVKEELGVKAQAGQLAFVVENRFEVDG 87 (154)
T ss_dssp EEEEECCEE--TT--EEEEEEE-------TTEEECEEEECBTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETT
T ss_pred EEEEEEEEE--CC--EEEEEec-------CCeEECcccCcCCCC-CHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCC
Confidence 344444454 45 8999998 478999999999999 99999999999999999887777776654333222
Q ss_pred e----EEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 134 I----IVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 134 ~----~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
. ..+.|.+.+..... ....+.+|+.++.|+|++++.+.
T Consensus 88 ~~~~~~~~~f~~~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 88 VSYHNIEFHYLVDLLEDAP-LTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEEEEEEEEEEESSCCC-SEEEETTEEEEEEEEEGGGGGGS
T ss_pred CcceEEEEEEEEEecCCCC-cccCCCCceeeEEEeEHHHHhhc
Confidence 2 23345555543211 11123467899999999999874
No 56
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.2e-16 Score=125.84 Aligned_cols=97 Identities=22% Similarity=0.198 Sum_probs=65.1
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCceEEEEEEEEeCCCCC
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGIIVVPVIGILPDRNS 148 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~~v~~~v~~~~~~~~ 148 (245)
+|||++|.. +|.|+||||++|+|| ++.+||+||++||||+.+..+..+..+... ...+...+.|++..... .
T Consensus 18 ~vLl~~r~~-----~g~w~~PgG~ve~gE-s~~~aa~RE~~EEtGl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 89 (146)
T 2jvb_A 18 KILLVQGTE-----SDSWSFPRGKISKDE-NDIDCCIREVKEEIGFDLTDYIDDNQFIER-NIQGKNYKIFLISGVSE-V 89 (146)
T ss_dssp EEEEECCSS-----SSCCBCCEECCCSSS-CHHHHHHHHHHHHTSCCCSSSSCSSCEEEE-EETTEEEEEEEECCCCS-S
T ss_pred EEEEEEEcC-----CCcEECCcccCCCCC-CHHHHHHHHHHHHHCCCchHhccccccccc-ccCCceEEEEEEEeccc-c
Confidence 899999764 489999999999999 999999999999999988754222111110 11222333343332221 1
Q ss_pred CCCCC-CcccceeEEEEccccccccC
Q 025996 149 FIPAP-NTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 149 ~~~~~-~~~Ev~~v~wvpl~el~~~~ 173 (245)
....+ +.+|+.++.|+|++++.+..
T Consensus 90 ~~~~~~~~~E~~~~~W~~~~el~~~~ 115 (146)
T 2jvb_A 90 FNFKPQVRNEIDKIEWFDFKKISKTM 115 (146)
T ss_dssp SCCCCCCSSSCCCEEEEEHHHHHTGG
T ss_pred ccCCcCCcchhheeEEeEHHHHHhhh
Confidence 11222 36899999999999998743
No 57
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.66 E-value=3.9e-16 Score=130.94 Aligned_cols=107 Identities=16% Similarity=0.193 Sum_probs=77.2
Q ss_pred CceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcc--
Q 025996 52 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIF-- 129 (245)
Q Consensus 52 r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~-- 129 (245)
.+.+|.+++++ ++ +|||++|.. +|.|+||||++|+|| ++.+||+||++||||+.+....+++.+....
T Consensus 67 ~~~~v~~vv~~--~~--~vLLv~r~~-----~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~ 136 (205)
T 3q1p_A 67 PKVDIRAVVFQ--NE--KLLFVKEKS-----DGKWALPGGWADVGY-TPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQ 136 (205)
T ss_dssp CEEEEEEEEEE--TT--EEEEEEC--------CCEECSEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHS
T ss_pred CcceEEEEEEE--CC--EEEEEEEcC-----CCcEECCcCccCCCC-CHHHHHHHHHHHHHCCccccceEEEEEeccccC
Confidence 34555555554 45 899999873 589999999999999 9999999999999999988888888775421
Q ss_pred ---cCCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 130 ---TKNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 130 ---~~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
.........|.+.+... .+.++ +|+.++.|+|++++.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~---~~~~~-~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 137 PSPSATHVYKIFIGCEIIGG---EKKTS-IETEEVEFFGENELPNL 178 (205)
T ss_dssp CCCCSSCEEEEEEEEEEEEE---CCCCC-TTSCCEEEECTTSCCCB
T ss_pred CCCCCceEEEEEEEEEecCC---ccCCC-CcceEEEEEeHHHhhhc
Confidence 11233444555555432 23344 89999999999998754
No 58
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.66 E-value=1.6e-15 Score=126.01 Aligned_cols=113 Identities=13% Similarity=0.160 Sum_probs=69.6
Q ss_pred CCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCC-CCcc----eEEEEe
Q 025996 51 KKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLD-PSLV----NVVTIL 125 (245)
Q Consensus 51 ~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~-~~~~----~~lg~l 125 (245)
..+.++.+++++. ++ .+|||++|.. .|.|+||||++|+|| ++.+||+||++||||+. +..+ ..+...
T Consensus 43 ~~h~~~~~vv~~~-~~-~~vLL~~r~~-----~g~w~lPgG~ve~gE-s~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~ 114 (197)
T 3fcm_A 43 IAHLTSSAFAVNK-ER-NKFLMIHHNI-----YNSWAWTGGHSDNEK-DQLKVAIKELKEETGVKNPTPLLDKAFALDVL 114 (197)
T ss_dssp SEEEEEEEEEECT-TS-CEEEEEEETT-----TTEEECEEEECTTCC-BHHHHHHHHHHHHHCCSSCEESCSSCSEEEEE
T ss_pred CccEEEEEEEEEC-CC-CEEEEEEecC-----CCCEECCccccCCCC-CHHHHHHHHHHHHHCCCcccccCCCceEEEEe
Confidence 4455666666653 32 3899999873 479999999999999 99999999999999998 3211 111111
Q ss_pred CCc-cc------CCceEE-EEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 126 DPI-FT------KNGIIV-VPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 126 ~~~-~~------~~~~~v-~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
... .. .....+ ..|++.+.. .....++++|+.++.|+|++++.+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~ 168 (197)
T 3fcm_A 115 TVNGHIKRGKYVSSHLHLNLTYLIECSE--DETLMLKEDENSGVMWIPFNEISKYC 168 (197)
T ss_dssp EECCEEETTEEECCEEEEEEEEEEECCT--TSCCCCCC----CEEEEEGGGHHHHC
T ss_pred eecCccccCcccCCceeEEEEEEEEeCC--CcccCCCcccccceEEccHHHHHhhc
Confidence 100 00 001111 334444443 22345678999999999999998653
No 59
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.66 E-value=5e-16 Score=136.06 Aligned_cols=94 Identities=14% Similarity=0.070 Sum_probs=75.9
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCceEEEEEEEEeCCCCC
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGIIVVPVIGILPDRNS 148 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~~v~~~v~~~~~~~~ 148 (245)
+|||+||+.. . +|.|+||||++|+|| |+++||+||++||||+.+..+++++.....+. ...+..|++.+...
T Consensus 152 ~vLL~rr~~~--~-~g~w~lPgG~vE~GE-t~eeAa~REv~EEtGl~v~~~~~~~~~~~~~~--~~~~~~f~a~~~~~-- 223 (269)
T 1vk6_A 152 SILLAQHTRH--R-NGVHTVLAGFVEVGE-TLEQAVAREVMEESGIKVKNLRYVTSQPWPFP--QSLMTAFMAEYDSG-- 223 (269)
T ss_dssp EEEEEEETTT--C-SSCCBCEEEECCTTC-CHHHHHHHHHHHHHCCEEEEEEEEEEEEEETT--EEEEEEEEEEEEEC--
T ss_pred EEEEEEecCC--C-CCcEECCcCcCCCCC-CHHHHHHHHHHHHhCceeeeEEEEEEEecCCC--CEEEEEEEEEECCC--
Confidence 8999999865 2 689999999999999 99999999999999999998888887754332 33555666665432
Q ss_pred CCCCCCcccceeEEEEccccccc
Q 025996 149 FIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 149 ~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
.+.++++|+.++.|++++++..
T Consensus 224 -~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 224 -DIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp -CCCCCTTTEEEEEEEETTSCCS
T ss_pred -CcCCCCcceEEEEEEEHHHhhh
Confidence 2346778999999999999865
No 60
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=4.8e-16 Score=133.36 Aligned_cols=121 Identities=27% Similarity=0.338 Sum_probs=86.5
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCC-------------------HHHHHHHHHHH
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDAD-------------------DAGTALREAKE 110 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s-------------------~~~aA~REl~E 110 (245)
..|.+|++|++.+..+|+++|||+||+.....++|.|.||||++|++|.+ +..||+||++|
T Consensus 6 ~~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~E 85 (232)
T 3qsj_A 6 DIRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAE 85 (232)
T ss_dssp CEEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHH
Confidence 56788888877764333389999999998777899999999999999833 58999999999
Q ss_pred HHCCCCCcce---------------------------------------EEEEeCCc----ccCCceEEEEEEEEeCCCC
Q 025996 111 EIGLDPSLVN---------------------------------------VVTILDPI----FTKNGIIVVPVIGILPDRN 147 (245)
Q Consensus 111 EtGl~~~~~~---------------------------------------~lg~l~~~----~~~~~~~v~~~v~~~~~~~ 147 (245)
||||.+..-. .|..+... .....+....|++.+..
T Consensus 86 E~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lpq-- 163 (232)
T 3qsj_A 86 EIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQH-- 163 (232)
T ss_dssp HHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECSS--
T ss_pred HhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECCC--
Confidence 9999653210 01111111 11234666777777652
Q ss_pred CCCCCCCcccceeEEEEcccccccc
Q 025996 148 SFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 148 ~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
......+.+|+.++.|++++++++.
T Consensus 164 ~~~v~~d~~E~~~~~W~~p~eal~~ 188 (232)
T 3qsj_A 164 LGEPRLHGAELDAALWTPARDMLTR 188 (232)
T ss_dssp CCCCCCCSSSEEEEEEEEHHHHHHH
T ss_pred CCCCCCCCCceEEEEEEcHHHHHHH
Confidence 1112468899999999999999764
No 61
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.65 E-value=1.3e-16 Score=133.08 Aligned_cols=95 Identities=20% Similarity=0.141 Sum_probs=69.3
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCceEEEEEEEEeCCCCC
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGIIVVPVIGILPDRNS 148 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~~v~~~v~~~~~~~~ 148 (245)
+|||++|... +|.|+||||++|+|| ++++||+||++||||+.+...++++.+.... ....++.|++.+.....
T Consensus 55 ~vLLv~r~~~----~g~W~lPgG~ve~gE-t~~eaa~REl~EEtGl~~~~~~~l~~~~~~~--~~~~~~~f~~~~~~~~~ 127 (194)
T 2fvv_A 55 EVLLVSSSRH----PDRWIVPGGGMEPEE-EPSVAAVREVCEEAGVKGTLGRLVGIFENQE--RKHRTYVYVLIVTEVLE 127 (194)
T ss_dssp EEEEEECSSC----TTSEECSEEECCTTC-CHHHHHHHHHHHHHCEEEEEEEEEEEEEETT--TTEEEEEEEEEEEEECS
T ss_pred EEEEEEEeCC----CCcEECCCCcCCCCc-CHHHHHHHHHHHHhCCccccceEEEEEEcCC--CceEEEEEEEEEccccC
Confidence 8999998753 589999999999999 9999999999999999988888888776322 23345556655432111
Q ss_pred CCCCCCcccceeEEEEccccccc
Q 025996 149 FIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 149 ~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
....+..+..++.|++++++.+
T Consensus 128 -~~~~~~e~~~~~~W~~~~el~~ 149 (194)
T 2fvv_A 128 -DWEDSVNIGRKREWFKIEDAIK 149 (194)
T ss_dssp -SCHHHHHHCCCEEEEEHHHHHH
T ss_pred -CCCCcccccceEEEEEHHHHHH
Confidence 1111122457899999999865
No 62
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.65 E-value=9.4e-17 Score=135.64 Aligned_cols=123 Identities=19% Similarity=0.174 Sum_probs=88.4
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcce-----EEEEeCCcccCCceEEEEEEEEe
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVN-----VVTILDPIFTKNGIIVVPVIGIL 143 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~-----~lg~l~~~~~~~~~~v~~~v~~~ 143 (245)
+|||++| ++|.|+||||++|+||.++++||+||++||||+.+..++ .++.....++ ....++.|++.+
T Consensus 57 ~vLl~~r------~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~~~~~~f~~~~ 129 (212)
T 1u20_A 57 VLLMMMR------FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QKCVTHFYIKEL 129 (212)
T ss_dssp EEEEEEE------TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SCEEEEEEEEEC
T ss_pred EEEEEEe------CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-CcEEEEEEEEEe
Confidence 8999998 368999999999999867999999999999999877543 5666544444 566777777765
Q ss_pred CCCC-------CCCCCCCcccceeEEEEccccccccCCCceeEEEEeCeEEEEEEEEeecCCCceEEechhHHHHHHHHH
Q 025996 144 PDRN-------SFIPAPNTAEVDAIFDAPLEMFLKDENRRAEEREWMGYKYLLHFFDYEAEGNKYVIWALTAGILINVAS 216 (245)
Q Consensus 144 ~~~~-------~~~~~~~~~Ev~~v~wvpl~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iWG~Ta~il~~~~~ 216 (245)
.... ......+++|+.++.|+|++++.+.... .|.| + ....||+++++|+..+..
T Consensus 130 ~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~~~~-------------~p~f-~----~~~~i~~a~~~l~~~l~~ 191 (212)
T 1u20_A 130 KLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGG-------------LPAF-L----CNNFIGNSKSQLLYALRS 191 (212)
T ss_dssp CHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTSSTB-------------HHHH-T----TSCBCTTHHHHHHHHHHH
T ss_pred cCCCcccccccccccccCCcceEEEEEEEHHHhhhhhcC-------------Cchh-h----hhhhhHHHHHHHHHHHHh
Confidence 4210 0011234578999999999999654110 1111 1 246899999999988765
No 63
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.64 E-value=2.2e-15 Score=122.17 Aligned_cols=83 Identities=24% Similarity=0.283 Sum_probs=62.3
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCceEEEEEEEEeCCCCC
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGIIVVPVIGILPDRNS 148 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~~v~~~v~~~~~~~~ 148 (245)
++||++|. +|.|+||||++|+|| ++.+||+||++||||+.+..+.+++.+.... ...+.|++.+..
T Consensus 28 ~vLL~~r~------~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~----~~~~~f~~~~~~--- 93 (163)
T 3f13_A 28 GVLVTASR------GGRYNLPGGKANRGE-LRSQALIREIREETGLRINSMLYLFDHITPF----NAHKVYLCIAQG--- 93 (163)
T ss_dssp EEEEEECC---------BBCSEEECCTTC-CHHHHHHHHHHHHHCCCCCEEEEEEEEECSS----EEEEEEEEEC-C---
T ss_pred EEEEEEEC------CCeEECCceeCCCCC-CHHHHHHHHHHHHHCcccceeEEEEEEecCC----eEEEEEEEEECC---
Confidence 78999875 378999999999999 9999999999999999998888887754322 444556665432
Q ss_pred CCCCCCcccceeEEEEccc
Q 025996 149 FIPAPNTAEVDAIFDAPLE 167 (245)
Q Consensus 149 ~~~~~~~~Ev~~v~wvpl~ 167 (245)
.+.++ +|+.++.|++.+
T Consensus 94 -~~~~~-~E~~~~~W~~~~ 110 (163)
T 3f13_A 94 -QPKPQ-NEIERIALVSSP 110 (163)
T ss_dssp -CCCCC-TTCCEEEEESST
T ss_pred -cCccC-CCceEEEEECcc
Confidence 23344 499999999943
No 64
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.64 E-value=3e-15 Score=131.18 Aligned_cols=111 Identities=22% Similarity=0.261 Sum_probs=79.3
Q ss_pred eEEEEEEEEcCCC--cEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCC--cceEEEEeCCcc
Q 025996 54 AAVLVCLFEGNDG--DLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPS--LVNVVTILDPIF 129 (245)
Q Consensus 54 aaV~v~l~~~~~g--~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~--~~~~lg~l~~~~ 129 (245)
.+|.++++...++ +.+|||++|... +++|.|+||||++|+|| ++++||+||++||||+.+. .+..++.+....
T Consensus 40 v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lPGG~ve~gE-s~~~AA~REl~EEtGl~v~~~~l~~l~~~~~~~ 116 (273)
T 2fml_A 40 LTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALPGGFVNRNE-STEDSVLRETKEETGVVISQENIEQLHSFSRPD 116 (273)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECCEEECCTTS-CHHHHHHHHHHHHHCCCCCGGGEEEEEEECCTT
T ss_pred eEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECCccCCCCCc-CHHHHHHHHHHHHHCCCCCcCcEEEEEEEcCCC
Confidence 4444444432233 679999999876 67899999999999999 9999999999999997654 456677664332
Q ss_pred c-C-CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccc
Q 025996 130 T-K-NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 130 ~-~-~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
. . .....+.|++.+.... ....+|+.++.|++++++.+
T Consensus 117 r~~~~~~~~~~y~a~~~~~~----~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 117 RDPRGWVVTVSYLAFIGEEP----LIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp SSTTSSEEEEEEEEECCCCC----CCCCTTEEEEEEEEEEEETT
T ss_pred CCCCceEEEEEEEEEeCCCC----CCCCcceeeEEEEEhhHhhh
Confidence 2 1 2244556667665421 24558999999999998654
No 65
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.63 E-value=1.9e-15 Score=125.14 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=70.0
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCce-----EEEEEEEEe
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGI-----IVVPVIGIL 143 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~-----~v~~~v~~~ 143 (245)
+|||++|.. +|.|+||||++|+|| ++.+||+||++||||+.+...++++.+......... .++.|.+..
T Consensus 16 ~vLL~~r~~-----~g~W~lPGG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~a~~ 89 (188)
T 3fk9_A 16 QVLLLQKPR-----RGWWVAPGGKMEAGE-SILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATE 89 (188)
T ss_dssp EEEEEECTT-----TCCEECCEEECCTTC-CHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEEEEEEEEEESC
T ss_pred EEEEEEeCC-----CCeEECCeecccCCC-CHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEEEEEEEEEEEC
Confidence 899999853 589999999999999 999999999999999999888888877655433221 333333332
Q ss_pred CCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 144 PDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 144 ~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
.. ..+. ...|..++.|++++++.+..
T Consensus 90 ~~---~~~~-~~~e~~~~~W~~~~el~~~~ 115 (188)
T 3fk9_A 90 HE---GEML-KQSPEGKLEWKKKDEVLELP 115 (188)
T ss_dssp EE---SCCC-SEETTEEEEEEEGGGGGGSC
T ss_pred CC---CCCc-CCCCCEeEEEEEHHHhhhCC
Confidence 21 1122 23566799999999997643
No 66
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.62 E-value=9.8e-16 Score=134.25 Aligned_cols=110 Identities=20% Similarity=0.060 Sum_probs=70.6
Q ss_pred EEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCce
Q 025996 55 AVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGI 134 (245)
Q Consensus 55 aV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~ 134 (245)
+|.+++++..+| +|||++|... +|.|+||||++|+|| ++++||+||++||||+++..+..+..+.. ....+.
T Consensus 103 ~v~avv~~~~~~--~vLLv~r~~~----~g~W~lPgG~ve~gE-s~~eAA~REl~EEtGl~~~~l~~~~~~~~-~~~~~~ 174 (271)
T 2a6t_A 103 VRGAIMLDMSMQ--QCVLVKGWKA----SSGWGFPKGKIDKDE-SDVDCAIREVYEETGFDCSSRINPNEFID-MTIRGQ 174 (271)
T ss_dssp EEEEEEBCSSSS--EEEEEEESST----TCCCBCSEEECCTTC-CHHHHHHHHHHHHHCCCCTTTCCTTCEEE-EEETTE
T ss_pred eEEEEEEECCCC--EEEEEEEeCC----CCeEECCcccCCCCc-CHHHHHHHHHHHHhCCCceeeeeeeeecc-CCcCCc
Confidence 444445553235 8999998653 589999999999999 99999999999999998876432211100 011223
Q ss_pred EEEEEEEEeCCCCCCCCC-CCcccceeEEEEccccccccC
Q 025996 135 IVVPVIGILPDRNSFIPA-PNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 135 ~v~~~v~~~~~~~~~~~~-~~~~Ev~~v~wvpl~el~~~~ 173 (245)
.++.|++..... ..... .+.+|+.++.|++++++.+..
T Consensus 175 ~~~~f~~~~~~~-~~~~~~~~~~E~~~~~W~~~~el~~~~ 213 (271)
T 2a6t_A 175 NVRLYIIPGISL-DTRFESRTRKEISKIEWHNLMDLPTFK 213 (271)
T ss_dssp EEEEEEECCCCT-TCCCC------EEEEEEEEGGGSTTCC
T ss_pred eEEEEEEEEecC-cccCCCCCccceeEEEEEEHHHHHHHH
Confidence 455555544321 11112 256899999999999998753
No 67
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.60 E-value=2.5e-15 Score=136.43 Aligned_cols=104 Identities=16% Similarity=0.154 Sum_probs=75.9
Q ss_pred CCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCC------------
Q 025996 65 DGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKN------------ 132 (245)
Q Consensus 65 ~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~------------ 132 (245)
+++.+|||++|... |.|+||||++|+|| ++++||+||++|||||.+....+++.....+...
T Consensus 35 ~~~~~vLLv~r~~~-----g~W~lPgG~ve~gE-s~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~ 108 (364)
T 3fjy_A 35 LDSIEVCIVHRPKY-----DDWSWPKGKLEQNE-THRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTA 108 (364)
T ss_dssp HTTEEEEEEEETTT-----TEEECCEEECCTTC-CHHHHHHHHHHHHHSCCEEEEEEEEEEC------------------
T ss_pred CCceEEEEEEcCCC-----CCEECCcCCCCCCC-CHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCccccccccccc
Confidence 34679999999543 89999999999999 9999999999999999988888888766554321
Q ss_pred -ceEEEEEEEEeCCCC---------CCCCCCCcccceeEEEEccccccccCC
Q 025996 133 -GIIVVPVIGILPDRN---------SFIPAPNTAEVDAIFDAPLEMFLKDEN 174 (245)
Q Consensus 133 -~~~v~~~v~~~~~~~---------~~~~~~~~~Ev~~v~wvpl~el~~~~~ 174 (245)
...++.|++...... .....++++|+.++.|+|++++.+...
T Consensus 109 ~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 109 DTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp ---CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred CceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc
Confidence 245566666655321 011235678999999999999877543
No 68
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.58 E-value=3.2e-15 Score=119.43 Aligned_cols=57 Identities=30% Similarity=0.433 Sum_probs=46.3
Q ss_pred EEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEE
Q 025996 56 VLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVV 122 (245)
Q Consensus 56 V~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~l 122 (245)
|.+++++ ++ +|||++|.. +|.|+||||++|+|| ++.+||+||++||||+.+.....+
T Consensus 4 ~~~vi~~--~~--~vLL~~r~~-----~g~W~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~ 60 (156)
T 1k2e_A 4 TSGVLVE--NG--KVLLVKHKR-----LGVYIYPGGHVEHNE-TPIEAVKREFEEETGIVVEPIGFT 60 (156)
T ss_dssp EEEECEE--TT--EEEEEECTT-----TCSEECSEEECCTTC-CHHHHHHHHHHHHHSEEEEECCCC
T ss_pred EEEEEEE--CC--EEEEEEEcC-----CCcEECCeeecCCCC-CHHHHHHHHHHHHHCCcceeccce
Confidence 3344454 45 899999874 489999999999999 999999999999999987655543
No 69
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.58 E-value=6.4e-16 Score=130.72 Aligned_cols=108 Identities=19% Similarity=0.135 Sum_probs=71.4
Q ss_pred EEEEEEEcCCCcEEEEEEEeCCCCC--CCCCCccC-CceecCCCCCC------HHHHHHHHHHHHHCCCCCcceEEEEeC
Q 025996 56 VLVCLFEGNDGDLRVFLTKRSSNLS--SHSGEVAL-PGGKREENDAD------DAGTALREAKEEIGLDPSLVNVVTILD 126 (245)
Q Consensus 56 V~v~l~~~~~g~~~vLL~rR~~~~~--~~~G~w~f-PGG~ve~gE~s------~~~aA~REl~EEtGl~~~~~~~lg~l~ 126 (245)
+.++++.. +| ++|+++|..... ..+|.|+| |||++|+|| + +++||+||++|||||++....+++.+.
T Consensus 70 i~~~II~~-~g--rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GE-s~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~ 145 (211)
T 3e57_A 70 IPYVVIMD-GD--RVLITKRTTKQSEKRLHNLYSLGIGGHVREGD-GATPREAFLKGLEREVNEEVDVSLRELEFLGLIN 145 (211)
T ss_dssp EEEEEEEE-TT--EEEEEEC------------CBSSEECCCBGGG-CSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEE
T ss_pred EEEEEEEE-CC--EEEEEEECCCCCcccccCCcccccceEEeCCC-CCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEe
Confidence 33344442 56 899999987642 26689999 999999999 7 499999999999999888888888876
Q ss_pred CcccC-Cc-eEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 127 PIFTK-NG-IIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 127 ~~~~~-~~-~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
..... .. .....|.+.... ..+...|+.++.|+++++|.+.
T Consensus 146 ~~~~~~~~~~l~~~f~~~~~~-----g~~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 146 SSTTEVSRVHLGALFLGRGKF-----FSVKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp CCSSHHHHTEEEEEEEEEEEE-----EEESCTTTCEEEEEEHHHHHHH
T ss_pred ccCCCCCeEEEEEEEEEEeCC-----ceeCCCCeEEEEEEEHHHHHHh
Confidence 53211 11 222345555431 2345678899999999999774
No 70
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.57 E-value=2.3e-14 Score=127.92 Aligned_cols=112 Identities=21% Similarity=0.259 Sum_probs=73.0
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEE------EEeC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVV------TILD 126 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~l------g~l~ 126 (245)
+.+|.++++. ++ +|||++|... ..+|.|+||||++|+|| ++++||+||++||||+.+....++ ..+.
T Consensus 203 ~~~v~~vi~~--~~--~vLL~~r~~~--~~~g~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 275 (341)
T 2qjo_A 203 FITTDAVVVQ--AG--HVLMVRRQAK--PGLGLIALPGGFIKQNE-TLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFD 275 (341)
T ss_dssp EEEEEEEEEE--TT--EEEEEECCSS--SSTTCEECSEEECCTTS-CHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEEC
T ss_pred ceEEEEEEEe--CC--EEEEEEecCC--CCCCeEECCCCcCCCCC-CHHHHHHHHHhhhhCCccccccccccccceEEEe
Confidence 3455555554 45 8999999864 45899999999999999 999999999999999998755432 2222
Q ss_pred Ccc-c-CCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcccccccc
Q 025996 127 PIF-T-KNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKD 172 (245)
Q Consensus 127 ~~~-~-~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~ 172 (245)
... . ......+.|++.+.... .....+++|+.++.|+|++++.+.
T Consensus 276 ~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 276 APGRSLRGRTITHAYFIQLPGGE-LPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp CTTSCTTSCEEEEEEEEECCSSS-CCCCC------CEEEEEHHHHHHT
T ss_pred CCCCCCCCcEEEEEEEEEecCCC-cCccCCCCceeeEEEeeHHHHhhh
Confidence 111 1 11234456666654321 111245689999999999998863
No 71
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.56 E-value=4.7e-14 Score=126.67 Aligned_cols=113 Identities=15% Similarity=0.122 Sum_probs=76.8
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceE------EEEeC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNV------VTILD 126 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~------lg~l~ 126 (245)
..+|.++++. ++ +|||++|... ..+|.|+||||++|+|| ++++||+||++||||+.+....+ ...+.
T Consensus 208 ~~~v~~vv~~--~~--~vLL~~r~~~--~~~g~w~lPgG~ve~gE-t~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~ 280 (352)
T 2qjt_B 208 FVTVDALVIV--ND--HILMVQRKAH--PGKDLWALPGGFLECDE-TIAQAIIRELFEETNINLTHEQLAIAKRCEKVFD 280 (352)
T ss_dssp EEEEEEEEEE--TT--EEEEEEESSS--SSTTCEECSEEECCTTS-CHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEEC
T ss_pred ceEEEEEEEE--CC--EEEEEEEcCC--CCCCeEECCCCcCCCCC-CHHHHHHHHHHHhhCCCcccchhcceeeeeEEec
Confidence 3455555553 45 8999999875 45799999999999999 99999999999999999875332 12222
Q ss_pred Cccc--CCceEEEEEEEEeCCCCCCCCCCCcccceeEEEEcc-cccccc
Q 025996 127 PIFT--KNGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPL-EMFLKD 172 (245)
Q Consensus 127 ~~~~--~~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl-~el~~~ 172 (245)
.... ......+.|++.+..........+++|+.++.|+++ +++.+.
T Consensus 281 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 281 YPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp CTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred CCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh
Confidence 1111 112345566666653221111234689999999999 998763
No 72
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.52 E-value=1.8e-14 Score=131.31 Aligned_cols=95 Identities=18% Similarity=0.208 Sum_probs=77.7
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCcceEEEEeCCcccCCceEEEEEEEEe
Q 025996 64 NDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNGIIVVPVIGIL 143 (245)
Q Consensus 64 ~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~~~~lg~l~~~~~~~~~~v~~~v~~~ 143 (245)
.+| +|||+||... +.++|.|+||||++|.| ++++|+.||++||||+.+...+.++.+.+.++.....++.|.+.+
T Consensus 250 ~~g--~vLL~rR~~~-g~~~GlWefPGG~ve~g--t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~~~~~~~~~ 324 (369)
T 3fsp_A 250 DEG--RVLIRKRDST-GLLANLWEFPSCETDGA--DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGRL 324 (369)
T ss_dssp SSS--EEEEEECCSS-STTTTCEECCEEECSSS--CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEEEEEEEEEE
T ss_pred CCC--EEEEEECCCC-CCcCCcccCCCcccCCC--CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEEEEEEEEEE
Confidence 456 8999999875 58999999999999999 689999999999999998777777777666666666677777766
Q ss_pred CCCCCCCCCCCcccceeEEEEccccccc
Q 025996 144 PDRNSFIPAPNTAEVDAIFDAPLEMFLK 171 (245)
Q Consensus 144 ~~~~~~~~~~~~~Ev~~v~wvpl~el~~ 171 (245)
... ..|..++.|++++++.+
T Consensus 325 ~~~--------~~e~~~~~Wv~~~el~~ 344 (369)
T 3fsp_A 325 VHG--------GPVEEPYRLAPEDELKA 344 (369)
T ss_dssp CCS--------SCCCTTEEEEEGGGGGG
T ss_pred cCC--------CCCccccEEeeHHHhhh
Confidence 431 36788999999999876
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.49 E-value=4.8e-14 Score=119.66 Aligned_cols=130 Identities=16% Similarity=0.127 Sum_probs=83.5
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCCCCc--c---eEEEEeCCcccCCceEEEEEEEEe
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSL--V---NVVTILDPIFTKNGIIVVPVIGIL 143 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~~~~--~---~~lg~l~~~~~~~~~~v~~~v~~~ 143 (245)
.+|++.|. +|.|+||||++|+||.++++||+||++||||+.+.. + ..+...... ......+.|.+.+
T Consensus 66 ~~ll~~r~------~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~--~~~~~~~~f~~~l 137 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGS--GPRVVAHFYAKRL 137 (217)
T ss_dssp EEEEEEET------TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECS--SSSEEEEEEEEEC
T ss_pred cEEEEEcc------CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCC--CCeEEEEEEEEEe
Confidence 46666664 478999999999998679999999999999998763 2 223332111 1234455566665
Q ss_pred CCCCC-------CCCCCCcccceeEEEEccccccccCCCceeEEEEeCeEEEEEEEEeecCCCceEEechhHHHHHHHHH
Q 025996 144 PDRNS-------FIPAPNTAEVDAIFDAPLEMFLKDENRRAEEREWMGYKYLLHFFDYEAEGNKYVIWALTAGILINVAS 216 (245)
Q Consensus 144 ~~~~~-------~~~~~~~~Ev~~v~wvpl~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iWG~Ta~il~~~~~ 216 (245)
..... .....+.+|+.+++|+|++++.+..+. +|.| -....|||+++.|+..+..
T Consensus 138 ~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~~~-------------~P~~-----L~~~~l~~~~~~i~~~l~~ 199 (217)
T 2xsq_A 138 TLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGG-------------LPTF-----LENSFIGSAREQLLEALQD 199 (217)
T ss_dssp CHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTB-------------HHHH-----TTSCBCTTHHHHHHHHHHH
T ss_pred ccccceecccccccccccCCceeeEEEEEHHHhhhcccc-------------CcHH-----HHHHHHHHHHHHHHHHHHh
Confidence 42110 001234579999999999999753221 1111 1245899999999999987
Q ss_pred HHhCCCCC
Q 025996 217 VVHQCPPA 224 (245)
Q Consensus 217 ~~~~~~p~ 224 (245)
.-+-.+.+
T Consensus 200 ~~~~~~~~ 207 (217)
T 2xsq_A 200 LGLLQSGS 207 (217)
T ss_dssp TTTTC---
T ss_pred cCCCCHHH
Confidence 65544443
No 74
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.36 E-value=6.3e-12 Score=111.11 Aligned_cols=43 Identities=33% Similarity=0.344 Sum_probs=39.9
Q ss_pred cEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCCC
Q 025996 67 DLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLD 115 (245)
Q Consensus 67 ~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl~ 115 (245)
.++|||++|... |.|+||||++|+|| ++.+||+||++||||+.
T Consensus 138 ~l~vLl~~r~~~-----g~W~lPGG~Ve~GE-s~~eAA~REl~EETGl~ 180 (292)
T 1q33_A 138 ILQFVAIKRKDC-----GEWAIPGGMVDPGE-KISATLKREFGEEALNS 180 (292)
T ss_dssp CEEEEEEECTTT-----CSEECCCEECCTTC-CHHHHHHHHHHHHHSCG
T ss_pred ceEEEEEEecCC-----CcEeCCCcccCCCC-CHHHHHHHHHHHHhCCc
Confidence 578999999763 89999999999999 99999999999999997
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.01 E-value=3.5e-10 Score=93.58 Aligned_cols=69 Identities=13% Similarity=0.054 Sum_probs=51.5
Q ss_pred EEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCC-CCCcceEEEEeCCcccCCceEEEEEEEEeC
Q 025996 69 RVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGL-DPSLVNVVTILDPIFTKNGIIVVPVIGILP 144 (245)
Q Consensus 69 ~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl-~~~~~~~lg~l~~~~~~~~~~v~~~v~~~~ 144 (245)
.||++.|-+ |.|+||||+||+||.|+++|+.||+.||+|+ .+...+++......+. .....+.|.+.+.
T Consensus 45 ~iLmQ~R~~------G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~yp-~~V~LHfY~crl~ 114 (214)
T 3kvh_A 45 SVLMQMRFD------GLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTEGP-HRVVAHLYARQLT 114 (214)
T ss_dssp EEEEEEETT------SCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC-----CEEEEEEEEECC
T ss_pred eEEEeeeeC------CEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEeccCC-CEEEEEEEEEEee
Confidence 478888664 7899999999999989999999999999997 5777777776654443 3566677777655
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.96 E-value=5.4e-09 Score=87.17 Aligned_cols=57 Identities=21% Similarity=0.248 Sum_probs=47.9
Q ss_pred CCCceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHHCC
Q 025996 50 TKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGL 114 (245)
Q Consensus 50 ~~r~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEtGl 114 (245)
+.|+.+++|+++. +++.++|||.++.. +.|.||||++|+|| +.++|+.||+.||+|+
T Consensus 56 g~R~sV~avil~~-~~~~phVLLlq~~~------~~f~LPGGkle~gE-~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 56 GMRRTVEGVLIVH-EHRLPHVLLLQLGT------TFFKLPGGELNPGE-DEVEGLKRLMTEILGR 112 (208)
T ss_dssp CSEEEEEEEEEEE-ETTEEEEEEEEEET------TEEECSEEECCTTC-CHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEEc-CCCCcEEEEEEcCC------CcEECCCcccCCCC-CHHHHHHHHHHHHhCC
Confidence 5677777777776 35557899999753 47999999999999 9999999999999995
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.66 E-value=5.6e-08 Score=86.84 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=63.5
Q ss_pred ceEEEEEEEEcCCCcEEEEEEEeCCCCCCCCCCccCCceecCCCCCCHHHHHHHHHHHHH-CCCCCcceEEEEeCCcccC
Q 025996 53 RAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEI-GLDPSLVNVVTILDPIFTK 131 (245)
Q Consensus 53 ~aaV~v~l~~~~~g~~~vLL~rR~~~~~~~~G~w~fPGG~ve~gE~s~~~aA~REl~EEt-Gl~~~~~~~lg~l~~~~~~ 131 (245)
+..|.+++.. +| +|||+ .+ .| |++|||.++.++ .++|+||++||+ |+.+....+++.++....
T Consensus 183 ~~~vgaii~~--~g--~vLL~--~~-----~G-W~LPG~~~~~~~---~~~a~RE~~EEttGl~v~~~~L~~v~~~~~~- 246 (321)
T 3rh7_A 183 EIRLGAVLEQ--QG--AVFLA--GN-----ET-LSLPNCTVEGGD---PARTLAAYLEQLTGLNVTIGFLYSVYEDKSD- 246 (321)
T ss_dssp CEEEEEEEES--SS--CEEEB--CS-----SE-EBCCEEEESSSC---HHHHHHHHHHHHHSSCEEEEEEEEEEECTTT-
T ss_pred cceEEEEEEE--CC--EEEEe--eC-----CC-ccCCcccCCCCh---hHHHHHHHHHHhcCCEEeeceEEEEEEcCCC-
Confidence 4555555543 45 68888 22 37 999998776555 469999999997 999988777777754332
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCcccceeEEEEccccccccC
Q 025996 132 NGIIVVPVIGILPDRNSFIPAPNTAEVDAIFDAPLEMFLKDE 173 (245)
Q Consensus 132 ~~~~v~~~v~~~~~~~~~~~~~~~~Ev~~v~wvpl~el~~~~ 173 (245)
......|.|.+... +..++.|+++++|....
T Consensus 247 -~~~~i~f~~~~~~g----------~~~e~~~f~~~elp~~~ 277 (321)
T 3rh7_A 247 -GRQNIVYHALASDG----------APRQGRFLRPAELAAAK 277 (321)
T ss_dssp -CCEEEEEEEEECSS----------CCSSSEEECHHHHTTCE
T ss_pred -ceEEEEEEEEeCCC----------CeeeeEEECHHHCCCcc
Confidence 22233555655431 12778899999987653
Done!