BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025997
(245 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 115/216 (53%), Gaps = 23/216 (10%)
Query: 42 EMKTVTVQPIAVPVISVDELKEKTDNF-------GTNSLIGEGSYGRVYFGVLRSGRAAA 94
E K++ V S ELK T+NF G N + GEG +G VY G + + A
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKM-GEGGFGVVYKGYV-NNTTVA 58
Query: 95 IKKLD-----SSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLH 149
+KKL ++++ Q+F ++ ++++ ++EN+VEL+G+ DG L Y + GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 150 DILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDD 209
D L LSW R KIA GAA G+ +LHE IHR+IKS+N+LL +
Sbjct: 119 DRL------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 169
Query: 210 DIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
AKISDF L+ + A + +R++GT Y APE
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 23/216 (10%)
Query: 42 EMKTVTVQPIAVPVISVDELKEKTDNF-------GTNSLIGEGSYGRVYFGVLRSGRAAA 94
E K++ V S ELK T+NF G N + GEG +G VY G + + A
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKM-GEGGFGVVYKGYV-NNTTVA 58
Query: 95 IKKLD-----SSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLH 149
+KKL ++++ Q+F ++ ++++ ++EN+VEL+G+ DG L Y + GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 150 DILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDD 209
D L LSW R KIA GAA G+ +LHE IHR+IKS+N+LL +
Sbjct: 119 DRL------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 169
Query: 210 DIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
AKISDF L+ + A + R++GT Y APE
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 106/192 (55%), Gaps = 8/192 (4%)
Query: 56 ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQP--DQEFLAQVS 113
S+ EL+ +DNF +++G G +G+VY G L G A+K+L + + +F +V
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 114 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 173
M+S + N++ L G+ + R+L Y + + GS+ L L W +R
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP-----LDWPKRQ 142
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
+IA+G+ARGL YLH+ +P+IIHR++K++N+LL ++ A + DF L+ + D
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHVXX 201
Query: 234 RVLGTFGYHAPE 245
V GT G+ APE
Sbjct: 202 AVRGTIGHIAPE 213
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 23/198 (11%)
Query: 60 ELKEKTDNF-------GTNSLIGEGSYGRVYFGVLRSGRAAAIKKLD-----SSKQPDQE 107
ELK T+NF G N + GEG +G VY G + + A+KKL ++++ Q+
Sbjct: 13 ELKNVTNNFDERPISVGGNKM-GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQ 70
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
F ++ ++++ ++EN+VEL+G+ DG L Y + GSL D L L
Sbjct: 71 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPL 124
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
SW R KIA GAA G+ +LHE IHR+IKS+N+LL + AKISDF L+ + A
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 228 ARLHSTRVLGTFGYHAPE 245
+ R++GT Y APE
Sbjct: 182 QXVMXXRIVGTTAYMAPE 199
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 12/201 (5%)
Query: 46 VTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLD-SSKQP 104
V + VP++ +L+E T+NF LIG G +G+VY GVLR G A+K+ S Q
Sbjct: 22 VPFESYRVPLV---DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG 78
Query: 105 DQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXX 164
+EF ++ +S ++ ++V L+G+ + +L Y++ G+L L+
Sbjct: 79 IEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS--- 135
Query: 165 XXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
+SW QR++I +GAARGL YLH +A IIHR++KS N+LL ++ + KI+DF +S +
Sbjct: 136 --MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGT 190
Query: 225 DAAARLHSTRVLGTFGYHAPE 245
+ V GT GY PE
Sbjct: 191 ELGQTHLXXVVKGTLGYIDPE 211
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 12/201 (5%)
Query: 46 VTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLD-SSKQP 104
V + VP++ +L+E T+NF LIG G +G+VY GVLR G A+K+ S Q
Sbjct: 22 VPFESYRVPLV---DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG 78
Query: 105 DQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXX 164
+EF ++ +S ++ ++V L+G+ + +L Y++ G+L L+
Sbjct: 79 IEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY-----GSDLPT 133
Query: 165 XXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
+SW QR++I +GAARGL YLH +A IIHR++KS N+LL ++ + KI+DF +S +
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGT 190
Query: 225 DAAARLHSTRVLGTFGYHAPE 245
+ V GT GY PE
Sbjct: 191 ELDQTHLXXVVKGTLGYIDPE 211
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 21/197 (10%)
Query: 60 ELKEKTDNFGTNSL------IGEGSYGRVYFGVLRSGRAAAIKKLD-----SSKQPDQEF 108
ELK T+NF + GEG +G VY G + + A+KKL ++++ Q+F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 68
Query: 109 LAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
++ + ++ ++EN+VEL+G+ DG L Y + GSL D L LS
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL------SCLDGTPPLS 122
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
W R KIA GAA G+ +LHE IHR+IKS+N+LL + AKISDF L+ + A
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 229 RLHSTRVLGTFGYHAPE 245
+ +R++GT Y APE
Sbjct: 180 XVXXSRIVGTTAYXAPE 196
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 8/192 (4%)
Query: 56 ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKL--DSSKQPDQEFLAQVS 113
S+ EL+ +DNF +++G G +G+VY G L G A+K+L + ++ + +F +V
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 114 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 173
M+S + N++ L G+ + R+L Y + + GS+ L L W +R
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP-----LDWPKRQ 134
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
+IA+G+ARGL YLH+ +P+IIHR++K++N+LL ++ A + DF L+ + D
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHVXX 193
Query: 234 RVLGTFGYHAPE 245
V G G+ APE
Sbjct: 194 AVRGXIGHIAPE 205
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKL---DSSKQPDQEFLAQVSMVSRLKNENVVELVGYY 130
IG GS+G V+ G A+K L D + EFL +V+++ RL++ N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
P + E+ S+GSL+ +LH L +R+ +A A+G+ YLH +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH------KSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
P I+HRN+KS N+L+ K+ DF LS A+ L S GT + APE
Sbjct: 158 PP-IVHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSKSAAGTPEWMAPE 209
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKL---DSSKQPDQEFLAQVSMVSRLKNENVVELVGYY 130
IG GS+G V+ G A+K L D + EFL +V+++ RL++ N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
P + E+ S+GSL+ +LH L +R+ +A A+G+ YLH +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH------KSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
P I+HR++KS N+L+ K+ DF LS A+ L S GT + APE
Sbjct: 158 PP-IVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMAPE 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 55 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS 113
++SV + K+K F IG+G+ G VY + + +G+ AI++++ +QP +E +
Sbjct: 13 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 114 MVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+V R KN N+V + Y+ G + E+ + GSL D++ + Q
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQI 119
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLH 231
+ + LE+LH ++IHRNIKS N+LL D K++DF Q P+ + R
Sbjct: 120 AAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-- 174
Query: 232 STRVLGTFGYHAPE 245
+ ++GT + APE
Sbjct: 175 -STMVGTPYWMAPE 187
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKN 120
K+ + F +GEGSYG VY + + +G+ AIK++ QE + ++S++ + +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-QEIIKEISIMQQCDS 83
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+VV+ G Y + E+ GS+ DI+ L+ + I
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--------LTEDEIATILQSTL 135
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
+GLEYLH R IHR+IK+ N+LL + AK++DF ++ Q D A+ V+GT
Sbjct: 136 KGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RNXVIGTPF 190
Query: 241 YHAPE 245
+ APE
Sbjct: 191 WMAPE 195
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 55 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS 113
++SV + K+K F IG+G+ G VY + + +G+ AI++++ +QP +E +
Sbjct: 12 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 114 MVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+V R KN N+V + Y+ G + E+ + GSL D++ + Q
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQI 118
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLH 231
+ + LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R
Sbjct: 119 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-- 173
Query: 232 STRVLGTFGYHAPE 245
+ ++GT + APE
Sbjct: 174 -SEMVGTPYWMAPE 186
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 55 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS 113
++SV + K+K F IG+G+ G VY + + +G+ AI++++ +QP +E +
Sbjct: 12 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 114 MVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+V R KN N+V + Y+ G + E+ + GSL D++ + Q
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQI 118
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLH 231
+ + LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R
Sbjct: 119 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-- 173
Query: 232 STRVLGTFGYHAPE 245
+ ++GT + APE
Sbjct: 174 -STMVGTPYWMAPE 186
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 55 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS 113
++SV + K+K F IG+G+ G VY + + +G+ AI++++ +QP +E +
Sbjct: 12 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 114 MVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+V R KN N+V + Y+ G + E+ + GSL D++ + Q
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQI 118
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLH 231
+ + LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R
Sbjct: 119 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-- 173
Query: 232 STRVLGTFGYHAPE 245
+ ++GT + APE
Sbjct: 174 -SXMVGTPYWMAPE 186
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 55 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS 113
++SV + K+K F IG+G+ G VY + + +G+ AI++++ +QP +E +
Sbjct: 13 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 114 MVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+V R KN N+V + Y+ G + E+ + GSL D++ + Q
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQI 119
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLH 231
+ + LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R
Sbjct: 120 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-- 174
Query: 232 STRVLGTFGYHAPE 245
+ ++GT + APE
Sbjct: 175 -SXMVGTPYWMAPE 187
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFL-AQVSMVSRLKNENV 123
DNF IGEGS G V +RS G+ A+KK+D KQ +E L +V ++ ++ENV
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
VE+ Y+ G + E G+L DI+ ++ Q + + + L
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLAVLQAL 138
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHA 243
LH + +IHR+IKS ++LL D K+SDF Q R ++GT + A
Sbjct: 139 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA 193
Query: 244 PE 245
PE
Sbjct: 194 PE 195
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFL-AQVSMVSRLKNENV 123
DNF IGEGS G V +RS G+ A+KK+D KQ +E L +V ++ ++ENV
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
VE+ Y+ G + E G+L DI+ ++ Q + + + L
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLAVLQAL 129
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHA 243
LH + +IHR+IKS ++LL D K+SDF Q R ++GT + A
Sbjct: 130 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA 184
Query: 244 PE 245
PE
Sbjct: 185 PE 186
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFL-AQVSMVSRLKNENV 123
DNF IGEGS G V +RS G+ A+KK+D KQ +E L +V ++ ++ENV
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
VE+ Y+ G + E G+L DI+ ++ Q + + + L
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLAVLQAL 140
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHA 243
LH + +IHR+IKS ++LL D K+SDF Q R ++GT + A
Sbjct: 141 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA 195
Query: 244 PE 245
PE
Sbjct: 196 PE 197
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFL-AQVSMVSRLKNENV 123
DNF IGEGS G V +RS G+ A+KK+D KQ +E L +V ++ ++ENV
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
VE+ Y+ G + E G+L DI+ ++ Q + + + L
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLAVLQAL 133
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHA 243
LH + +IHR+IKS ++LL D K+SDF Q R ++GT + A
Sbjct: 134 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA 188
Query: 244 PE 245
PE
Sbjct: 189 PE 190
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFL-AQVSMVSRLKNENV 123
DNF IGEGS G V +RS G+ A+KK+D KQ +E L +V ++ ++ENV
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
VE+ Y+ G + E G+L DI+ ++ Q + + + L
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLAVLQAL 183
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHA 243
LH + +IHR+IKS ++LL D K+SDF Q R ++GT + A
Sbjct: 184 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA 238
Query: 244 PE 245
PE
Sbjct: 239 PE 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFL-AQVSMVSRLKNENV 123
DNF IGEGS G V +RS G+ A+KK+D KQ +E L +V ++ ++ENV
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
VE+ Y+ G + E G+L DI+ ++ Q + + + L
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLAVLQAL 260
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHA 243
LH + +IHR+IKS ++LL D K+SDF Q R ++GT + A
Sbjct: 261 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA 315
Query: 244 PE 245
PE
Sbjct: 316 PE 317
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 12 IRKASKNGPFVPNNPAGNP----GGFYVKEAPAKEMKTVTVQPIAVPV---ISVDELKEK 64
IRK G ++ + N +Y K A + TV P + P ++ D +
Sbjct: 123 IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIP 182
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
++ +G+G +G V+ G AIK L + FL + ++ +L++E +V
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L + P+ ++ E+ SKGSL D L L Q V +A A G+
Sbjct: 243 QLYAVVSEEPIYIVT-EYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMA 294
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
Y+ +HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 295 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 12 IRKASKNGPFVPNNPAGNP----GGFYVKEAPAKEMKTVTVQPIAVPV---ISVDELKEK 64
IRK G ++ + N +Y K A + TV P + P ++ D +
Sbjct: 123 IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIP 182
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
++ +G+G +G V+ G AIK L + FL + ++ +L++E +V
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L + P+ ++ E+ SKGSL D L L Q V +A A G+
Sbjct: 243 QLYAVVSEEPIYIVT-EYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMA 294
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
Y+ +HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 295 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 12 IRKASKNGPFVPNNPAGNP----GGFYVKEAPAKEMKTVTVQPIAVPV---ISVDELKEK 64
IRK G ++ + N +Y K A + TV P + P ++ D +
Sbjct: 123 IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIP 182
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
++ +G+G +G V+ G AIK L + FL + ++ +L++E +V
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L + P+ ++ E+ SKGSL D L L Q V +A A G+
Sbjct: 243 QLYAVVSEEPIYIVG-EYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMA 294
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
Y+ +HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 295 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P + + SL+ LH + + IA ARG++YLH K+
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETK--------FEMKKLIDIARQTARGMDYLHAKS-- 140
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D+ KI DF L+ + + ++ G+ + APE
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P + + SL+ LH + + IA ARG++YLH K+
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHASETK--------FEMKKLIDIARQTARGMDYLHAKS-- 140
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D+ KI DF L+ + + ++ G+ + APE
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 33 FYVKEAPAKEMKTVTVQPIAVPV---ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS 89
+Y K A + TV P + P ++ D + ++ +G+G +G V+ G
Sbjct: 231 YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG 290
Query: 90 GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLH 149
AIK L + FL + ++ +L++E +V+L + P+ ++ E+ SKGSL
Sbjct: 291 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLL 349
Query: 150 DILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDD 209
D L L Q V +A A G+ Y+ +HR+++++N+L+ ++
Sbjct: 350 DFLK-------GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGEN 399
Query: 210 DIAKISDFDLSNQAPD 225
+ K++DF L+ D
Sbjct: 400 LVCKVADFGLARLIED 415
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P + + SL+ LH + + IA ARG++YLH K+
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHASETK--------FEMKKLIDIARQTARGMDYLHAKS-- 128
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D+ KI DF L+ + ++ G+ + APE
Sbjct: 129 -IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 20/193 (10%)
Query: 55 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFL-AQV 112
V+S + +E NF IGEGS G V + +G+ A+KK+D KQ +E L +V
Sbjct: 37 VVSPGDPREYLANFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEV 93
Query: 113 SMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
++ ++NVV++ Y+ G + E G+L DI+ ++ Q
Sbjct: 94 VIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQI 143
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
+ + R L YLH + +IHR+IKS ++LL D K+SDF Q +
Sbjct: 144 ATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--R 198
Query: 233 TRVLGTFGYHAPE 245
++GT + APE
Sbjct: 199 KXLVGTPYWMAPE 211
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 76 PIXIVT-EYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVERM---N 124
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIED 156
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVC-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 79 PIYIVT-EYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVERM---N 127
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIED 159
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 75 PIYIVT-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 123
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIED 155
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVT-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 77 PIYIVT-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 125
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIED 157
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVD- 132
IG+G +G V G R + A K + Q FLA+ S++++L++ N+V+L+G V+
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAV--KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 133 -GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAE 191
G L ++ E+ +KGSL D L L +K ++ +EYL
Sbjct: 259 KGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDCLLKFSLDVCEAMEYLEGN-- 308
Query: 192 PRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA 223
+HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 309 -NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 30/186 (16%)
Query: 74 IGEGSYGRVYFG-VLRSGRAAAIKKL---DSSKQPD-----QEFLAQVSMVSRLKNENVV 124
IG+G +G V+ G +++ AIK L DS + + QEF +V ++S L + N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L G + P V+ E G L+ L + W+ ++++ + A G+E
Sbjct: 87 KLYGLMHNPPRMVM--EFVPCGDLYHRL--------LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDD-----IAKISDFDLSNQAPDAAARLHSTRVLGTF 239
Y+ + P I+HR+++S N+ L D AK++DF LS Q+ + + L LG F
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL-----LGNF 190
Query: 240 GYHAPE 245
+ APE
Sbjct: 191 QWMAPE 196
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVD- 132
IG+G +G V G R + A K + Q FLA+ S++++L++ N+V+L+G V+
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAV--KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 133 -GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAE 191
G L ++ E+ +KGSL D L L +K ++ +EYL
Sbjct: 78 KGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDCLLKFSLDVCEAMEYLEGN-- 127
Query: 192 PRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA 223
+HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 128 -NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 158
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 30/186 (16%)
Query: 74 IGEGSYGRVYFG-VLRSGRAAAIKKL---DSSKQPD-----QEFLAQVSMVSRLKNENVV 124
IG+G +G V+ G +++ AIK L DS + + QEF +V ++S L + N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L G + P V+ E G L+ L + W+ ++++ + A G+E
Sbjct: 87 KLYGLMHNPPRMVM--EFVPCGDLYHRL--------LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDD-----IAKISDFDLSNQAPDAAARLHSTRVLGTF 239
Y+ + P I+HR+++S N+ L D AK++DF LS Q+ + + L LG F
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL-----LGNF 190
Query: 240 GYHAPE 245
+ APE
Sbjct: 191 QWMAPE 196
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVI-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVI-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVD- 132
IG+G +G V G R + A K + Q FLA+ S++++L++ N+V+L+G V+
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAV--KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 133 -GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAE 191
G L ++ E+ +KGSL D L L +K ++ +EYL
Sbjct: 72 KGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDCLLKFSLDVCEAMEYLEGN-- 121
Query: 192 PRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA 223
+HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 122 -NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 16/174 (9%)
Query: 73 LIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
++G G++G V R+ + AIK+++S + + F+ ++ +SR+ + N+V+L G ++
Sbjct: 16 VVGRGAFGVVCKAKWRA-KDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P+ L E+A GSL+++LH +SW + ++G+ YLH
Sbjct: 74 -PV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC------LQCSQGVAYLHSMQPK 125
Query: 193 RIIHRNIKSSNVLLF-DDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+IHR++K N+LL + KI DF + + H T G+ + APE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPE 174
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVD- 132
IG+G +G V G R + A K + Q FLA+ S++++L++ N+V+L+G V+
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAV--KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 133 -GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAE 191
G L ++ E+ +KGSL D L L +K ++ +EYL
Sbjct: 87 KGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDCLLKFSLDVCEAMEYLEGN-- 136
Query: 192 PRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA 223
+HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 137 -NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 32 GFYVKEAPAKEMKTVTVQPIAVPV---ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLR 88
+Y K A + V P + P ++ D + ++ +G+G +G V+ G
Sbjct: 148 AYYSKHADGLCHRLTNVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 207
Query: 89 SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSL 148
AIK L + FL + ++ +L++E +V+L + P+ ++ E+ SKGSL
Sbjct: 208 GTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSL 266
Query: 149 HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD 208
D L L Q V +A A G+ Y+ +HR+++++N+L+ +
Sbjct: 267 LDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 316
Query: 209 DDIAKISDFDLSNQAPD 225
+ + K++DF L D
Sbjct: 317 NLVCKVADFGLGRLIED 333
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 16/174 (9%)
Query: 73 LIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
++G G++G V R+ + AIK+++S + + F+ ++ +SR+ + N+V+L G ++
Sbjct: 15 VVGRGAFGVVCKAKWRA-KDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P+ L E+A GSL+++LH +SW + ++G+ YLH
Sbjct: 73 -PV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC------LQCSQGVAYLHSMQPK 124
Query: 193 RIIHRNIKSSNVLLF-DDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+IHR++K N+LL + KI DF + + H T G+ + APE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPE 173
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ ++++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVT-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKGSL D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVT-EYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ ++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIED 166
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKG L D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVT-EYMSKGCLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKL-DSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A I K+ D + + Q F +V+++ + ++ N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH Q + IA A+G++YLH K
Sbjct: 104 DNLAIVT-QWCEGSSLYKHLHVQETK--------FQMFQLIDIARQTAQGMDYLHAK--- 151
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L + KI DF L+ + + G+ + APE
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ SKG L D L L Q V +A A G+ Y+
Sbjct: 86 PIYIVM-EYMSKGCLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 54 PVISVDE-----LKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQE 107
P S+DE L++ F L+G G+YG+VY G +++G+ AAIK +D + ++E
Sbjct: 7 PARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE 66
Query: 108 FLAQVSMVSRLKN-ENVVELVGYYV-------DGPLRVLAYEHASKGSLHDILHXXXXXX 159
+++M+ + + N+ G ++ D L L E GS+ D++
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL-WLVMEFCGAGSVTDLIKNTKGNT 125
Query: 160 XXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
W I RGL +LH+ ++IHR+IK NVLL ++ K+ DF +
Sbjct: 126 LKE-----EWI--AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 220 SNQAPDAAARLHSTRVLGTFGYHAPE 245
S Q R ++ +GT + APE
Sbjct: 176 SAQLDRTVGRRNT--FIGTPYWMAPE 199
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH + + IA A+G++YLH K+
Sbjct: 76 PQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + + ++ G+ + APE
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V+ G AIK L + FL + ++ +LK++ +V+L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ +KGSL D L L V +A A G+ Y+
Sbjct: 77 PIYIVT-EYMNKGSLLDFLK-------DGEGRALKLPNLVDMAAQVAAGMAYIERM---N 125
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
IHR+++S+N+L+ + I KI+DF L+ D
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIED 157
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ +KGSL D L L Q V ++ A G+ Y+
Sbjct: 83 PIYIVT-EYMNKGSLLDFLK-------GETGKYLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIED 163
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P + + SL+ LH + + IA A+G++YLH K+
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 152
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + + ++ G+ + APE
Sbjct: 153 -IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH + + IA A+G++YLH K+
Sbjct: 96 PQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 144
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + + ++ G+ + APE
Sbjct: 145 -IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G+G +G V+ G AIK L + FL + ++ +L++E +V+L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ +KGSL D L L Q V ++ A G+ Y+
Sbjct: 83 PIYIVT-EYMNKGSLLDFLK-------GETGKYLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR+++++N+L+ ++ + K++DF L+ D
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIED 163
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 30/186 (16%)
Query: 74 IGEGSYGRVYFG-VLRSGRAAAIKKL---DSSKQPD-----QEFLAQVSMVSRLKNENVV 124
IG+G +G V+ G +++ AIK L DS + + QEF +V ++S L + N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L G + P V+ E G L+ L + W+ ++++ + A G+E
Sbjct: 87 KLYGLMHNPPRMVM--EFVPCGDLYHRL--------LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDD-----IAKISDFDLSNQAPDAAARLHSTRVLGTF 239
Y+ + P I+HR+++S N+ L D AK++DF S Q+ + + L LG F
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL-----LGNF 190
Query: 240 GYHAPE 245
+ APE
Sbjct: 191 QWMAPE 196
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 50 PIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSG---RAAAIKKLD--SSKQP 104
P PV+ +++K +IGEG++G+V ++ AAIK++ +SK
Sbjct: 13 PTIYPVLDWNDIK-------FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 65
Query: 105 DQEFLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXX--- 160
++F ++ ++ +L + N++ L+G LA E+A G+L D L
Sbjct: 66 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 125
Query: 161 ----XXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISD 216
LS Q + A ARG++YL +K + IHRN+ + N+L+ ++ +AKI+D
Sbjct: 126 FAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIAD 182
Query: 217 FDLS 220
F LS
Sbjct: 183 FGLS 186
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P + + SL+ LH + + IA A+G++YLH K+
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + ++ G+ + APE
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH + + IA A+G++YLH K+
Sbjct: 76 PQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + ++ G+ + APE
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH + + IA A+G++YLH K+
Sbjct: 81 PQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + ++ G+ + APE
Sbjct: 130 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH + + IA A+G++YLH K+
Sbjct: 81 PQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + ++ G+ + APE
Sbjct: 130 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH + + IA A+G++YLH K+
Sbjct: 78 PQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 126
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + ++ G+ + APE
Sbjct: 127 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
L ++ + SL+ LH + + IA A+G++YLH K+
Sbjct: 103 PQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 151
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + ++ G+ + APE
Sbjct: 152 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVD 132
IG GS+G VY G A + + + + Q Q F +V ++ + ++ N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P + + SL+ LH + + IA A+G++YLH K+
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS-- 152
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
IIHR++KS+N+ L +D KI DF L+ + ++ G+ + APE
Sbjct: 153 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 31/181 (17%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLD-SSKQPD---QEFLAQVSMVSRLKNENVVELVG 128
IG GS+G VYF +R+ AIKK+ S KQ + Q+ + +V + +L++ N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV---GAARGLEY 185
Y+ L E+ GS D+L Q V+IA GA +GL Y
Sbjct: 122 CYLREHTAWLVMEYCL-GSASDLLEVHKKPL-----------QEVEIAAVTHGALQGLAY 169
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF-DLSNQAPDAAARLHSTRVLGTFGYHAP 244
LH +IHR++K+ N+LL + + K+ DF S AP + +GT + AP
Sbjct: 170 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAP 219
Query: 245 E 245
E
Sbjct: 220 E 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFL-AQVSMVSRLKNENVVELVGYYV 131
IGEGS G V + SGR A+K +D KQ +E L +V ++ ++ NVVE+ Y+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 132 DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAE 191
G + E G+L DI+ L+ Q + + L YLH +
Sbjct: 113 VGEELWVLMEFLQGGALTDIV----------SQVRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 192 PRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGYHAPE 245
+IHR+IKS ++LL D K+SDF Q + D R ++GT + APE
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPE 211
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 32/188 (17%)
Query: 73 LIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVS-------MVSRLKNENVVE 125
+IG G +G+VY G A+K + PD++ + + + LK+ N++
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKA--ARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P L E A G L+ +L V AV ARG+ Y
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL----------VNWAVQIARGMNY 120
Query: 186 LHEKAEPRIIHRNIKSSNVLLFD--------DDIAKISDFDLSNQAPDAAARLHSTRVLG 237
LH++A IIHR++KSSN+L+ + I KI+DF L+ + R G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE----WHRTTKMSAAG 176
Query: 238 TFGYHAPE 245
+ + APE
Sbjct: 177 AYAWMAPE 184
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 31/181 (17%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLD-SSKQPD---QEFLAQVSMVSRLKNENVVELVG 128
IG GS+G VYF +R+ AIKK+ S KQ + Q+ + +V + +L++ N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV---GAARGLEY 185
Y+ L E+ GS D+L Q V+IA GA +GL Y
Sbjct: 83 CYLREHTAWLVMEYCL-GSASDLLEVHKKPL-----------QEVEIAAVTHGALQGLAY 130
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF-DLSNQAPDAAARLHSTRVLGTFGYHAP 244
LH +IHR++K+ N+LL + + K+ DF S AP + +GT + AP
Sbjct: 131 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAP 180
Query: 245 E 245
E
Sbjct: 181 E 181
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 50 PIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSG---RAAAIKKLD--SSKQP 104
P PV+ +++K +IGEG++G+V ++ AAIK++ +SK
Sbjct: 16 PTIYPVLDWNDIK-------FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 68
Query: 105 DQEFLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXX--- 160
++F ++ ++ +L + N++ L+G LA E+A G+L D L
Sbjct: 69 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 128
Query: 161 ----XXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISD 216
LS Q + A ARG++YL +K + IHR++ + N+L+ ++ +AKI+D
Sbjct: 129 FAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 185
Query: 217 FDLS 220
F LS
Sbjct: 186 FGLS 189
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V+ G A+K L FLA+ +++ +L+++ +V L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ GSL D L L+ + + +A A G+ ++ E+
Sbjct: 77 PIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 125
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
IHRN++++N+L+ D KI+DF L+ D
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIED 157
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 50 PIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSG---RAAAIKKLD--SSKQP 104
P PV+ +++K +IGEG++G+V ++ AAIK++ +SK
Sbjct: 6 PTIYPVLDWNDIK-------FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 58
Query: 105 DQEFLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXX--- 160
++F ++ ++ +L + N++ L+G LA E+A G+L D L
Sbjct: 59 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 118
Query: 161 ----XXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISD 216
LS Q + A ARG++YL +K + IHR++ + N+L+ ++ +AKI+D
Sbjct: 119 FAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 175
Query: 217 FDLS 220
F LS
Sbjct: 176 FGLS 179
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMV 115
S+D+ + + + +G G YG VY GV + A+K L +EFL + +++
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 82
Query: 116 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
+K+ N+V+L+G P + E+ G+L D L + +
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-------LYM 135
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A + +EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 136 ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLS 177
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + + L +E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 116
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 242 HAPE 245
APE
Sbjct: 174 VAPE 177
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 56 ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSM 114
+S+D+ + + + +G G YG VY GV + A+K L +EFL + ++
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 115 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 174
+ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-------ECNRQEVSAVVLLY 113
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 114 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 137 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 196 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+YG V V R + A A+K +D + D + ++ + L +ENVV+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+G ++ L E+ S G L D + AQR + A G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA--GVVYLHGIG 124
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
I HR+IK N+LL + D KISDF L+ ++ GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 116
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 242 HAPE 245
APE
Sbjct: 174 VAPE 177
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+YG V V R + A A+K +D + D + ++ + L +ENVV+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+G ++ L E+ S G L D + AQR + A G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA--GVVYLHGIG 125
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
I HR+IK N+LL + D KISDF L+ ++ GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 114
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 115 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 242 HAPE 245
APE
Sbjct: 172 VAPE 175
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMV 115
S+D+ + + + +G G YG VY GV + A+K L +EFL + +++
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 116 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
+K+ N+V+L+G P + E + G+L D L +S + +
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-------ECNRQEVSAVVLLYM 114
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A + +EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 115 ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 116
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 242 HAPE 245
APE
Sbjct: 174 VAPE 177
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+YG V V R + A A+K +D + D + ++ + L +ENVV+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+G ++ L E+ S G L D + AQR + A G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA--GVVYLHGIG 125
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
I HR+IK N+LL + D KISDF L+ ++ GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+YG V V R + A A+K +D + D + ++ + L +ENVV+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+G ++ L E+ S G L D + AQR + A G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA--GVVYLHGIG 125
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
I HR+IK N+LL + D KISDF L+ ++ GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+YG V V R + A A+K +D + D + ++ + L +ENVV+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+G ++ L E+ S G L D + AQR + A G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA--GVVYLHGIG 125
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
I HR+IK N+LL + D KISDF L+ ++ GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 88 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 147 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 89 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 148 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD +G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 218 ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 276
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L +S + +A +
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-------ECNRQEVSAVVLLYMATQISS 329
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHRN+ + N L+ ++ + K++DF LS
Sbjct: 330 AMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXX-------XXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 81 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 140 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 85 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 144 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY R + A+K L ++ + + +V + S L++
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD----------EQRTATYITEL 121
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL + KI+DF S AP + T + GT
Sbjct: 122 ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTL 174
Query: 240 GYHAPE 245
Y PE
Sbjct: 175 DYLPPE 180
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 74 IGEGSYGRVYF----GVLR------SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+GEG++G+V G+ + + A + K D++++ + ++++ M+ + K++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 123 VVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXX-------XXXXXXXXXXLSWAQRVK 174
++ L+G DGPL V+ E+ASKG+L + L LS V
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 116
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 242 HAPE 245
APE
Sbjct: 174 VAPE 177
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+YG V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD +G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 257 ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 315
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 368
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHRN+ + N L+ ++ + K++DF LS
Sbjct: 369 AMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 404
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD +G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 215 ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 273
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 326
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHRN+ + N L+ ++ + K++DF LS
Sbjct: 327 AMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 362
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 74
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 75 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 126
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 127 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 170
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 73
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 74 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 125
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 126 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 169
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 56 ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSM 114
+S+D+ + + + +G G +G VY GV + A+K L +EFL + ++
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 115 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 174
+ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-------ECNRQEVSAVVLLY 113
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 114 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 117
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 118 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 67
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 68 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 119
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 120 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 163
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 75
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 76 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 127
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 128 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 171
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 117
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 118 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 123
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 124 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 66
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 67 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 118
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 119 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 162
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 117
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 118 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 61 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 112
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 113 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 156
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 70
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 71 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 122
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 123 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 166
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
DE + + +G G +G V+ G A+K L FLA+ +++ +L
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+++ +V L P+ ++ E+ GSL D L L+ + + +A
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQ 123
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D
Sbjct: 124 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A +G ++ L QR +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD----------EQRTATYITEL 122
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 175
Query: 240 GYHAPE 245
Y PE
Sbjct: 176 DYLPPE 181
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 11 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 69
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L +S + +A +
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-------ECNRQEVSAVVLLYMATQISS 122
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 16 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 74
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L +S + +A +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-------ECNRQEVSAVVLLYMATQISS 127
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 11 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 69
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L +S + +A +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-------ECNRQEVSAVVLLYMATQISS 122
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 16 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 74
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 127
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 11 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 69
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L +S + +A +
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-------ECNRQEVSAVVLLYMATQISS 122
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 54 PVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQV 112
P + D+ + + + +G G YG VY GV + A+K L +EFL +
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 64
Query: 113 SMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+++ +K+ N+V+L+G P + E + G+L D L
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL------- 117
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ +A + +EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 118 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 162
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 54 PVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQV 112
P + D+ + + + +G G YG VY GV + A+K L +EFL +
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 61
Query: 113 SMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+++ +K+ N+V+L+G P + E + G+L D L
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL------- 114
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ +A + +EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 11 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 69
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L +S + +A +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-------ECNRQEVSAVVLLYMATQISS 122
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 11 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 69
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 122
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 16 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 74
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 127
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 27/142 (19%)
Query: 118 LKNENVVELVG-----YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+K+EN+++ +G VD L ++ H KGSL D L +SW +
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFH-EKGSLSDFL----------KANVVSWNEL 123
Query: 173 VKIAVGAARGLEYLHEKA-------EPRIIHRNIKSSNVLLFDDDIAKISDFDLS--NQA 223
IA ARGL YLHE +P I HR+IKS NVLL ++ A I+DF L+ +A
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183
Query: 224 PDAAARLHSTRVLGTFGYHAPE 245
+A H +GT Y APE
Sbjct: 184 GKSAGDTHGQ--VGTRRYMAPE 203
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 16 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 74
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 127
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 16 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 74
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 127
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 227 AARLHSTRVLGTFGYHAPE 245
+T + APE
Sbjct: 211 DXXKKTTNGRLPVKWMAPE 229
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 227 AARLHSTRVLGTFGYHAPE 245
+T + APE
Sbjct: 211 DXXKKTTNGRLPVKWMAPE 229
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 11 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 69
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 122
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 12 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 70
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 123
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 124 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 13 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 71
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 124
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 50 PIAVPVISV-DELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQE 107
P+AV V + + + + + F IG+GS+G V+ G+ R+ + AIK +D + D+
Sbjct: 6 PVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI 65
Query: 108 FLAQ--VSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
Q ++++S+ + V + G Y+ G + E+ GS D+L
Sbjct: 66 EDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF----- 120
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
Q + +GL+YLH + + IHR+IK++NVLL + K++DF ++ Q D
Sbjct: 121 -----QIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD 172
Query: 226 AAARLHSTRVLGTFGYHAPE 245
+ ++ +GT + APE
Sbjct: 173 TQIKRNT--FVGTPFWMAPE 190
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G G V+ G A+K L FLA+ +++ +L+++ +V L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E+ GSL D L L+ + + +A A G+ ++ E+
Sbjct: 81 PIYIIT-EYMENGSLVDFLK-------TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 129
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
IHR+++++N+L+ D KI+DF L+ DA
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDA 162
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 24 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 82
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 135
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 136 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 171
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 13 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 71
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 124
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 143
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 144 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 196
Query: 240 GYHAPE 245
Y PE
Sbjct: 197 DYLPPE 202
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE 121
E+TD + L G G YG VY GV + A+K L +EFL + +++ +K+
Sbjct: 13 ERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 71
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+G P + E + G+L D L + +A +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------LYMATQISS 124
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+EYL +K IHR++ + N L+ ++ + K++DF LS
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 227 AARLHSTRVLGTFGYHAPE 245
++T + APE
Sbjct: 211 DYYKNTTNGRLPVKWMAPE 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 118 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 134
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 135 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 187
Query: 240 GYHAPE 245
Y PE
Sbjct: 188 DYLPPE 193
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG +G+V + A+K L D++++ + ++++ M+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 141 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 120
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 121 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 173
Query: 240 GYHAPE 245
Y PE
Sbjct: 174 DYLPPE 179
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 118 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG +G+V + A+K L D++++ + ++++ M+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 200 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 122
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 175
Query: 240 GYHAPE 245
Y PE
Sbjct: 176 DYLPPE 181
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG +G+V + A+K L D++++ + ++++ M+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 146 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY R + A+K L ++ + + +V + S L++
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD----------EQRTATYITEL 121
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL + KI+DF S AP + + GT
Sbjct: 122 ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRDTLCGTL 174
Query: 240 GYHAPE 245
Y PE
Sbjct: 175 DYLPPE 180
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG +G+V + A+K L D++++ + ++++ M+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 143 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 118 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 116
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 117 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 169
Query: 240 GYHAPE 245
Y PE
Sbjct: 170 DYLPPE 175
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 122
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 175
Query: 240 GYHAPE 245
Y PE
Sbjct: 176 DYLPPE 181
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 74 IGEGSYGRVYF----GVL--RSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVVE 125
IGEG++GRV+ G+L A+K L D + F + ++++ N N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX---------------LSWA 170
L+G G L +E+ + G L++ L LS A
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ IA A G+ YL E+ + +HR++ + N L+ ++ + KI+DF LS
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLS 221
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 121
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 122 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 174
Query: 240 GYHAPE 245
Y PE
Sbjct: 175 DYLPPE 180
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 118
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 119 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTL 171
Query: 240 GYHAPE 245
Y PE
Sbjct: 172 DYLPPE 177
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 118 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 118 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 120
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 121 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 173
Query: 240 GYHAPE 245
Y PE
Sbjct: 174 DYLPPE 179
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNE 121
+++ +GEG+ G V V R + A A+K +D + D + ++ + L +E
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
NVV+ G+ +G ++ L E+ S G L D + AQR + A
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQLMA-- 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+ YLH I HR+IK N+LL + D KISDF L+ ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 242 HAPE 245
APE
Sbjct: 173 VAPE 176
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 122
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTL 175
Query: 240 GYHAPE 245
Y PE
Sbjct: 176 DYLPPE 181
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQ--VSMVSRLKNENVVELVGYY 130
IG+GS+G V+ G+ R+ + AIK +D + D+ Q ++++S+ + V + G Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ + E+ GS D+L L Q I +GL+YLH +
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGP----------LDETQIATILREILKGLDYLHSEK 144
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+ IHR+IK++NVLL + K++DF ++ Q D + ++ +GT + APE
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPE 194
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 118
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 119 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTL 171
Query: 240 GYHAPE 245
Y PE
Sbjct: 172 DYLPPE 177
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ E+ASKG+L + L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ +I+DF L+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 46/206 (22%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQ--VSMVSRLKNENV 123
DN LIG G YG VY G L R A+K + + Q F+ + + V ++++N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR--QNFINEKNIYRVPLMEHDNI 69
Query: 124 VELV----GYYVDGPLR-VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+ DG + +L E+ GSL L W ++A
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----------DWVSSCRLAHS 119
Query: 179 AARGLEYLHEKA------EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
RGL YLH + +P I HR++ S NVL+ +D ISDF LS RL
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS-------MRLTG 172
Query: 233 TRV-------------LGTFGYHAPE 245
R+ +GT Y APE
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPE 198
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 29 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 141
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 142 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 226 AAARLHSTR 234
++TR
Sbjct: 198 DPEAAYTTR 206
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 73 LIGEGSYGRVYFGVLR----SGRAAAIKKLDS--SKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G G V +G LR AIK L + +++ ++FL++ S++ + + N++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G G L ++ E+ GSL L + Q V + G G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLR--------THDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAA 227
+ +HR++ + NVL+ + + K+SDF LS PDAA
Sbjct: 168 SDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQ--VSMVSRLKNENVVELVGYY 130
IG+GS+G V+ G+ R+ + AIK +D + D+ Q ++++S+ + V + G Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ + E+ GS D+L L Q I +GL+YLH +
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP----------LDETQIATILREILKGLDYLHSEK 124
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+ IHR+IK++NVLL + K++DF ++ Q D + ++ +GT + APE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPE 174
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A +G ++ L QR +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD----------EQRTATYITEL 122
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLXGTL 175
Query: 240 GYHAPE 245
Y PE
Sbjct: 176 DYLPPE 181
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + T + GT
Sbjct: 115 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 167
Query: 240 GYHAPE 245
Y PE
Sbjct: 168 DYLPPE 173
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 73 LIGEGSYGRVYFGVLR----SGRAAAIKKLDS--SKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G G V +G LR AIK L + +++ ++FL++ S++ + + N++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G G L ++ E+ GSL L + Q V + G G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLR--------THDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAA 227
+ +HR++ + NVL+ + + K+SDF LS PDAA
Sbjct: 168 SDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQ--VSMVSRLKNENVVELVGYY 130
IG+GS+G V+ G+ R+ + AIK +D + D+ Q ++++S+ + V + G Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ + E+ GS D+L L Q I +GL+YLH +
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP----------LDETQIATILREILKGLDYLHSEK 124
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+ IHR+IK++NVLL + K++DF ++ Q D ++ +GT + APE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPE 174
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQ--VSMVSRLKNENVVELVGYY 130
IG+GS+G V+ G+ R+ + AIK +D + D+ Q ++++S+ + V + G Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ + E+ GS D+L L Q I +GL+YLH +
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEPGP----------LDETQIATILREILKGLDYLHSEK 139
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+ IHR+IK++NVLL + K++DF ++ Q D ++ +GT + APE
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPE 189
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 54 PVISVDELKEKTDNFGTNSLI------GEGSYGRVYFGVLRSGR-----AAAIKKLDSSK 102
P +ELK+K ++L+ G G++G V GV R + A + K + K
Sbjct: 318 PFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK 377
Query: 103 QPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXX 162
+E + + ++ +L N +V L+G L +L E A G LH L
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFL--------VG 428
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ + ++ + G++YL EK +HRN+ + NVLL + AKISDF LS +
Sbjct: 429 KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLS-K 484
Query: 223 APDAAARLHSTRVLGTF--GYHAPE 245
A A ++ R G + ++APE
Sbjct: 485 ALGADDSYYTARSAGKWPLKWYAPE 509
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGRA-AAIKKL-DSSKQPDQEFLAQVSMVSRLKNENV 123
D G ++G+G+YG VY G S + AIK++ + + Q ++++ LK++N+
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
V+ +G + + + E GSL +L + +++ GL
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------LEGL 135
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFD-DDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 242
+YLH+ +I+HR+IK NVL+ + KISDF S + A + GT Y
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYM 190
Query: 243 APE 245
APE
Sbjct: 191 APE 193
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 119
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI++F S AP + T + GT
Sbjct: 120 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTL 172
Query: 240 GYHAPE 245
Y PE
Sbjct: 173 DYLPPE 178
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGRA-AAIKKL-DSSKQPDQEFLAQVSMVSRLKNENV 123
D G ++G+G+YG VY G S + AIK++ + + Q ++++ LK++N+
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 124 VELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
V+ +G + + + E GSL +L + +++ GL
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------LEGL 121
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFD-DDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 242
+YLH+ +I+HR+IK NVL+ + KISDF S + A + GT Y
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYM 176
Query: 243 APE 245
APE
Sbjct: 177 APE 179
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 120
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI++F S AP + T + GT
Sbjct: 121 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTL 173
Query: 240 GYHAPE 245
Y PE
Sbjct: 174 DYLPPE 179
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 119
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 120 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTL 172
Query: 240 GYHAPE 245
Y PE
Sbjct: 173 DYLPPE 178
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYV-D 132
+G G +G V+ G + A+K L Q FL + +++ L+++ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P+ ++ E+ +KGSL D L + + + A G+ Y+ K
Sbjct: 81 EPIYIIT-EYMAKGSLLDFLKSDEGGKVLL-------PKLIDFSAQIAEGMAYIERK--- 129
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
IHR+++++NVL+ + + KI+DF L+ D
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIED 162
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF L+ D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 128
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 143
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 144 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTL 196
Query: 240 GYHAPE 245
Y PE
Sbjct: 197 DYLPPE 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
IG G +G V+ G + AIK + +++F+ + ++ +L + +V+L G ++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
L +E G L D L + + + G+ YL E
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMCLDVCEGMAYLEEAC--- 121
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+IHR++ + N L+ ++ + K+SDF ++ D
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 106 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 156
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
IG G +G V+ G + AIK + +++F+ + ++ +L + +V+L G ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
L +E G L D L + + + G+ YL E
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMCLDVCEGMAYLEEAC--- 123
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+IHR++ + N L+ ++ + K+SDF ++ D
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 128
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ +ASKG+L + L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 118
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 119 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDTLCGTL 171
Query: 240 GYHAPE 245
Y PE
Sbjct: 172 DYLPPE 177
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTATYITEL 120
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 121 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTL 173
Query: 240 GYHAPE 245
Y PE
Sbjct: 174 DYLPPE 179
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 120
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 121 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTL 173
Query: 240 GYHAPE 245
Y PE
Sbjct: 174 DYLPPE 179
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 118 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 133
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
IG G +G V+ G + AIK + +++F+ + ++ +L + +V+L G ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
L +E G L D L + + + G+ YL E +
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMCLDVCEGMAYLEEAS--- 123
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+IHR++ + N L+ ++ + K+SDF ++ D
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
IG G +G V+ G + AIK + +++F+ + ++ +L + +V+L G ++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
L +E G L D L + + + G+ YL E
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMCLDVCEGMAYLEEAC--- 126
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+IHR++ + N L+ ++ + K+SDF ++ D
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL------RSGRAAAIKKL-DSSKQPDQEFLAQVSMVS 116
K N +GEG++G+V+ + A+K L D+S ++F + +++
Sbjct: 11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLT 70
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXX----XXLSWAQR 172
L++E++V+ G V+G ++ +E+ G L+ L L+ +Q
Sbjct: 71 NLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ IA A G+ YL A +HR++ + N L+ ++ + KI DF +S
Sbjct: 131 LHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 54 PVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPD 105
P +V E ++ D N + ++G G +G V G L+ + AIK K+ +++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
++FL + S++ + + N++ L G ++ E+ GSL L
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------- 143
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ Q V + G A G++YL + +HR++ + N+L+ + + K+SDF L D
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
Query: 226 AAARLHSTR 234
++TR
Sbjct: 200 DPEAAYTTR 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 118 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 131
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 168
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 125
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 130
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 167
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 128
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 57 SVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPDQEF 108
+V E ++ D N + ++G G +G V G L+ + AIK K+ +++ ++F
Sbjct: 22 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 109 LAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
L + S++ + + N++ L G ++ E+ GSL L +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FT 133
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 229 RLHSTR 234
++TR
Sbjct: 191 AAYTTR 196
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 508
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ +D K+ DF LS D+
Sbjct: 509 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
IG G +G V+ G + AIK + + +F+ + ++ +L + +V+L G ++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
L +E G L D L + + + G+ YL E
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMCLDVCEGMAYLEEAC--- 143
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+IHR++ + N L+ ++ + K+SDF ++ D
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 175
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVL--------RSGRAAAIKKL--DSSKQPDQEFLAQVSMV 115
D +GEG++G+V + A+K L D++++ + ++++ M+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 116 SRL-KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXX 166
+ K++N++ L+G DGPL V+ +ASKG+L + L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+++ V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 21/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQE-----FLAQVSMVSRLKN 120
D+F +G+G +G VY + + K+ Q ++E ++ + S L++
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
N++ + Y+ D L E A +G L+ L + A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELA 124
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
L Y HE+ ++IHR+IK N+L+ KI+DF S AP R + GT
Sbjct: 125 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----MCGTLD 177
Query: 241 YHAPE 245
Y PE
Sbjct: 178 YLPPE 182
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYV-D 132
+G G +G V+ G + A+K L Q FL + +++ L+++ +V L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P+ ++ E +KGSL D L + + + A G+ Y+ K
Sbjct: 80 EPIYIIT-EFMAKGSLLDFLKSDEGGKVLL-------PKLIDFSAQIAEGMAYIERK--- 128
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
IHR+++++NVL+ + + KI+DF L+ D
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIED 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 21/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
D+F +G+G +G VY + + A+K L S+ + + ++ + S L++
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
N++ + Y+ D L E A +G L+ L + A
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELA 125
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
L Y HE+ ++IHR+IK N+L+ KI+DF S AP R + GT
Sbjct: 126 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----MCGTLD 178
Query: 241 YHAPE 245
Y PE
Sbjct: 179 YLPPE 183
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 57 SVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPDQEF 108
+V E ++ D N + ++G G +G V G L+ + AIK K+ +++ ++F
Sbjct: 5 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 109 LAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
L + S++ + + N++ L G ++ E+ GSL L +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FT 116
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 229 RLHSTR 234
++TR
Sbjct: 174 AAYTTR 179
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY + + A+K L ++ + + +V + S L++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 120
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K R+IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 121 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTL 173
Query: 240 GYHAPE 245
Y PE
Sbjct: 174 DYLPPE 179
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQP--DQEFLAQVSM 114
V ELK+ D+F S +G G+ G V R SG A K + +P + + ++ +
Sbjct: 10 VGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQV 67
Query: 115 VSRLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 173
+ + +V G +Y DG + + EH GSL +L A+R+
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKE---------------AKRI 111
Query: 174 ------KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K+++ RGL YL EK + I+HR++K SN+L+ K+ DF +S Q D+
Sbjct: 112 PEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 169
Query: 228 ARLHSTRVLGTFGYHAPE 245
A +GT Y APE
Sbjct: 170 A----NSFVGTRSYMAPE 183
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V +G R AIK + + EF+ + ++ L +E +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
+ E+ + G L + L Q +++ +EYL K +
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDVCEAMEYLESK---Q 140
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ + N L+ D + K+SDF LS D
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V +G R AIK + + EF+ + ++ L +E +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
+ E+ + G L + L Q +++ +EYL K +
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDVCEAMEYLESK---Q 140
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ + N L+ D + K+SDF LS D
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 74 IGEGSYGRVYFGVLR--SGRAAAIK----KLDSSKQPD--QEFLAQVSMVSRLKNENVVE 125
+G+GS+G V G SG+ ++ K D QP+ +F+ +V+ + L + N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P++++ E A GSL D L + AV A G+ Y
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAVQVAEGMGY 126
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRVLGTFGYHA 243
L K R IHR++ + N+LL D+ KI DF L P D + R + F + A
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCA 182
Query: 244 PE 245
PE
Sbjct: 183 PE 184
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V +G R AIK + + EF+ + ++ L +E +V+L G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
+ E+ + G L + L Q +++ +EYL K +
Sbjct: 83 RPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDVCEAMEYLESK---Q 131
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ + N L+ D + K+SDF LS D
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 163
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 128
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ D K+ DF LS D+
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 165
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 74 IGEGSYGRVYFGVLR--SGRAAAIK----KLDSSKQPD--QEFLAQVSMVSRLKNENVVE 125
+G+GS+G V G SG+ ++ K D QP+ +F+ +V+ + L + N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P++++ E A GSL D L + AV A G+ Y
Sbjct: 86 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAVQVAEGMGY 136
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRVLGTFGYHA 243
L K R IHR++ + N+LL D+ KI DF L P D + R + F + A
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCA 192
Query: 244 PE 245
PE
Sbjct: 193 PE 194
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V +G R AIK + + EF+ + ++ L +E +V+L G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
+ E+ + G L + L Q +++ +EYL K +
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDVCEAMEYLESK---Q 124
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ + N L+ D + K+SDF LS D
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 156
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V +G R AIK + + EF+ + ++ L +E +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
+ E+ + G L + L Q +++ +EYL K +
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDVCEAMEYLESK---Q 125
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ + N L+ D + K+SDF LS D
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V +G R AIK + + EF+ + ++ L +E +V+L G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
+ E+ + G L + L Q +++ +EYL K +
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDVCEAMEYLESK---Q 120
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ + N L+ D + K+SDF LS D
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V +G R AIK + + EF+ + ++ L +E +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
+ E+ + G L + L Q +++ +EYL K +
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDVCEAMEYLESK---Q 125
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+HR++ + N L+ D + K+SDF LS D
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 74 IGEGSYGRVYFGVLR--SGRAAAIK----KLDSSKQPD--QEFLAQVSMVSRLKNENVVE 125
+G+GS+G V G SG+ ++ K D QP+ +F+ +V+ + L + N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P++++ E A GSL D L + AV A G+ Y
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAVQVAEGMGY 130
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRVLGTFGYHA 243
L K R IHR++ + N+LL D+ KI DF L P D + R + F + A
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 186
Query: 244 PE 245
PE
Sbjct: 187 PE 188
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 21/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
D+F +G+G +G VY + + A+K L S+ + + ++ + S L++
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
N++ + Y+ D L E A +G L+ L + A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELA 124
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
L Y HE+ ++IHR+IK N+L+ KI+DF S AP R + GT
Sbjct: 125 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----MCGTLD 177
Query: 241 YHAPE 245
Y PE
Sbjct: 178 YLPPE 182
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 73 LIGEGSYGRVYFGVLRS-GR---AAAIKKLDS--SKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L++ G+ AIK L +++ +EFL++ S++ + ++ N++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + ++ E G+L L + Q V + G A G+ YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--------FTVIQLVGMLRGIASGMRYL 134
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG---TFGYHA 243
AE +HR++ + N+L+ + + K+SDF LS + ++ T LG + A
Sbjct: 135 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 244 PE 245
PE
Sbjct: 192 PE 193
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 73 LIGEGSYGRVYFGVLRSGRA-----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+IG G +G VY G+L++ AIK L + Q +FL + ++ + + N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G ++ E+ G+L L S Q V + G A G++Y
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGE--------FSVLQLVGMLRGIAAGMKY 162
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
L A +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKKLDSSKQP----DQEFLAQVSMVSRLKN 120
++F +G+G +G VY ++ + A+K L ++ + + +V + S L++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA- 179
N++ L GY+ D L E+A G+++ L QR +
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
A L Y H K ++IHR+IK N+LL KI+DF S AP + + GT
Sbjct: 118 ANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTL 170
Query: 240 GYHAPE 245
Y PE
Sbjct: 171 DYLPPE 176
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 74 IGEGSYGRVYFGVLR--SGRAAAIK----KLDSSKQPD--QEFLAQVSMVSRLKNENVVE 125
+G+GS+G V G SG+ ++ K D QP+ +F+ +V+ + L + N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P++++ E A GSL D L + AV A G+ Y
Sbjct: 86 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAVQVAEGMGY 136
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRVLGTFGYHA 243
L K R IHR++ + N+LL D+ KI DF L P D + R + F + A
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 192
Query: 244 PE 245
PE
Sbjct: 193 PE 194
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 74 IGEGSYGRVYFGVLR--SGRAAAIK----KLDSSKQPD--QEFLAQVSMVSRLKNENVVE 125
+G+GS+G V G SG+ ++ K D QP+ +F+ +V+ + L + N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P++++ E A GSL D L + AV A G+ Y
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAVQVAEGMGY 126
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRVLGTFGYHA 243
L K R IHR++ + N+LL D+ KI DF L P D + R + F + A
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 182
Query: 244 PE 245
PE
Sbjct: 183 PE 184
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 57 SVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLR----SGRAAAIK--KLDSSKQPDQEF 108
+V E ++ D N + ++G G +G V G L+ + AIK K+ +++ ++F
Sbjct: 5 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 109 LAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
L + S++ + + N++ L G ++ E GSL L +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FT 116
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
Q V + G A G++YL + +HR++ + N+L+ + + K+SDF LS D
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 229 RLHSTR 234
++TR
Sbjct: 174 AAYTTR 179
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 74 IGEGSYGRVYFGVLRS----GRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELV 127
IGEG +G V+ G+ S A AIK +S ++FL + + + + ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
G + P+ ++ E + G L L L A + A + L YL
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 508
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
K R +HR+I + NVL+ D K+ DF LS D+
Sbjct: 509 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 545
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
IG G +G V+ G + AIK + +++F+ + ++ +L + +V+L G ++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
L E G L D L + + + G+ YL E
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAAETL--------LGMCLDVCEGMAYLEEAC--- 124
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+IHR++ + N L+ ++ + K+SDF ++ D
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 74 IGEGSYGRVYFGVLR--SGRAAAIK----KLDSSKQPD--QEFLAQVSMVSRLKNENVVE 125
+G+GS+G V G SG+ ++ K D QP+ +F+ +V+ + L + N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P++++ E A GSL D L + AV A G+ Y
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAVQVAEGMGY 130
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRVLGTFGYHA 243
L K R IHR++ + N+LL D+ KI DF L P D + R + F + A
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 186
Query: 244 PE 245
PE
Sbjct: 187 PE 188
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 74 IGEGSYGRVYFGVLR--SGRAAAIK----KLDSSKQPD--QEFLAQVSMVSRLKNENVVE 125
+G+GS+G V G SG+ ++ K D QP+ +F+ +V+ + L + N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L G + P++++ E A GSL D L + AV A G+ Y
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAVQVAEGMGY 126
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRVLGTFGYHA 243
L K R IHR++ + N+LL D+ KI DF L P D + R + F + A
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 182
Query: 244 PE 245
PE
Sbjct: 183 PE 184
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 74 IGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGYY 130
IG G++G V+ G LR+ A+K + PD +FL + ++ + + N+V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ E G L L +++ AA G+EYL K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR--------LRVKTLLQMVGDAAAGMEYLESKC 233
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
IHR++ + N L+ + ++ KISDF +S + D
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 74 IGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGYY 130
IG G++G V+ G LR+ A+K + PD +FL + ++ + + N+V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ E G L L +++ AA G+EYL K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR--------LRVKTLLQMVGDAAAGMEYLESKC 233
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 227
IHR++ + N L+ + ++ KISDF +S + D
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 73 LIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQE-FLAQVSMVSRLKNENVVELVG-Y 129
++G+G +G+ R +G +K+L + Q FL +V ++ L++ NV++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 130 YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEK 189
Y D L + E+ G+L I+ W+QRV A A G+ YLH
Sbjct: 77 YKDKRLNFIT-EYIKGGTLRGII--------KSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 190 AEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
IIHR++ S N L+ ++ ++DF L+ D + R L
Sbjct: 128 ---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 64 KTDNFGTNSL-IGEGSYGRVYFGVLRSGR-----AAAIKKLDSSKQPDQEFLAQVSMVSR 117
K DN + +G G++G V GV R + A + K + K +E + + ++ +
Sbjct: 7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 66
Query: 118 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
L N +V L+G L +L E A G LH L + + ++
Sbjct: 67 LDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFL--------VGKREEIPVSNVAELLH 117
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 237
+ G++YL EK +HR++ + NVLL + AKISDF LS +A A ++ R G
Sbjct: 118 QVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTARSAG 173
Query: 238 TF--GYHAPE 245
+ ++APE
Sbjct: 174 KWPLKWYAPE 183
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 73 LIGEGSYGRVYFGVLR-SGRA---AAIKKLDS--SKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L+ G+ AIK L S +++ ++FL++ S++ + + NV+ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G ++ E GSL L + Q V + G A G++YL
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--------FTVIQLVGMLRGIAAGMKYL 151
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG---TFGYHA 243
A+ +HR++ + N+L+ + + K+SDF LS D + T LG + A
Sbjct: 152 ---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 244 PE 245
PE
Sbjct: 209 PE 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 73 LIGEGSYGRVYFGVLRS-GR---AAAIKKLDS--SKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L++ G+ AIK L +++ +EFL++ S++ + ++ N++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + ++ E G+L L + Q V + G A G+ YL
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--------FTVIQLVGMLRGIASGMRYL 132
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG---TFGYHA 243
AE +HR++ + N+L+ + + K+SDF LS + ++ T LG + A
Sbjct: 133 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 244 PE 245
PE
Sbjct: 190 PE 191
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVS 113
V ELK+ D+F S +G G+ G V F V SG A K + +P + + ++
Sbjct: 62 VGELKD--DDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 118
Query: 114 MVSRLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
++ + +V G +Y DG + + EH GSL +L
Sbjct: 119 VLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG-------- 169
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
K+++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 170 -KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---- 222
Query: 233 TRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 223 NSFVGTRSYMSPE 235
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 73 LIGEGSYGRVYFGVLR-SGR---AAAIK--KLDSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L+ G+ A AIK K+ +++ ++FL + S++ + + NVV L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G G ++ E G+L L + Q V + G A G+ YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ--------FTVIQLVGMLRGIAAGMRYL 161
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
A+ +HR++ + N+L+ + + K+SDF LS D +++T
Sbjct: 162 ---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVS 113
V ELK+ D+F S +G G+ G V F V SG A K + +P + + ++
Sbjct: 27 VGELKD--DDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 83
Query: 114 MVSRLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
++ + +V G +Y DG + + EH GSL +L
Sbjct: 84 VLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG-------- 134
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
K+++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 135 -KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---- 187
Query: 233 TRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 188 NSFVGTRSYMSPE 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
++ K D+F S +G G+ G V F V SG A K + +P + + ++ ++
Sbjct: 1 MELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 117 RLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
+ +V G +Y DG + + EH GSL +L K+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KV 109
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 110 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSF 163
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 164 VGTRSYMSPE 173
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
++ K D+F S +G G+ G V F V SG A K + +P + + ++ ++
Sbjct: 1 MELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 117 RLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
+ +V G +Y DG + + EH GSL +L K+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KV 109
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 110 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSF 163
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 164 VGTRSYMSPE 173
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
++ K D+F S +G G+ G V F V SG A K + +P + + ++ ++
Sbjct: 1 MELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 117 RLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
+ +V G +Y DG + + EH GSL +L K+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KV 109
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 110 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSF 163
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 164 VGTRSYMSPE 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
++ K D+F S +G G+ G V F V SG A K + +P + + ++ ++
Sbjct: 1 MELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 117 RLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
+ +V G +Y DG + + EH GSL +L K+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KV 109
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 110 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSF 163
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 164 VGTRSYMSPE 173
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 18/175 (10%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQ--VSMVSRLKNENVVELVGYY 130
IG+GS+G VY G+ + AIK +D + D+ Q ++++S+ + + G Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ + E+ GS D+L L I +GL+YLH +
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL----------KPGPLEETYIATILREILKGLDYLHSE- 135
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
R IHR+IK++NVLL + K++DF ++ Q D ++ +GT + APE
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPE 186
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
++ K D+F S +G G+ G V F V SG A K + +P + + ++ ++
Sbjct: 1 MELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 117 RLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
+ +V G +Y DG + + EH GSL +L K+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KV 109
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 110 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSF 163
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 164 VGTRSYMSPE 173
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQVS 113
V ELK+ D+F S +G G+ G V F V SG A K + +P + + ++
Sbjct: 19 VGELKD--DDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 75
Query: 114 MVSRLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
++ + +V G +Y DG + + EH GSL +L
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG-------- 126
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
K+++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D+ A
Sbjct: 127 -KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---- 179
Query: 233 TRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 180 NSFVGTRSYMSPE 192
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 56 ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSSKQP--DQEFLAQ 111
+++ ELK+ D+F S +G G+ G V F V SG A K + +P + + +
Sbjct: 1 MALGELKD--DDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE 57
Query: 112 VSMVSRLKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+ ++ + +V G +Y DG + + EH GSL +L
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG------ 110
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
K+++ +GL YL EK +I+HR++K SN+L+ K+ DF +S Q D A
Sbjct: 111 ---KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA-- 163
Query: 231 HSTRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 164 --NEFVGTRSYMSPE 176
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+L ++N+V +G + R + E + G L L L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 152
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 153 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+L ++N+V +G + R + E + G L L L
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 138
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 139 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 18/188 (9%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFG-VLRSGRAAAIKKLDSSKQPD----QEFLAQVSMVSR 117
EK ++F +L+G+GS+ VY + +G AIK +D Q +V + +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 118 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
LK+ +++EL Y+ D L E G ++ L S +
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--------KNRVKPFSENEARHFMH 119
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 237
G+ YLH I+HR++ SN+LL + KI+DF L+ Q + H T + G
Sbjct: 120 QIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-HYT-LCG 174
Query: 238 TFGYHAPE 245
T Y +PE
Sbjct: 175 TPNYISPE 182
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 73 LIGEGSYGRVYFGVLR-SGRA---AAIKKLDS--SKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L+ G+ AIK L S +++ ++FL++ S++ + + NV+ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G ++ E GSL L + Q V + G A G++YL
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--------FTVIQLVGMLRGIAAGMKYL 125
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG---TFGYHA 243
A+ +HR + + N+L+ + + K+SDF LS D + T LG + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 244 PE 245
PE
Sbjct: 183 PE 184
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 73 LIGEGSYGRVYFGVLRSGRAAAIK------KLDSSKQPD-QEFLAQVSMVSRLKNENVVE 125
++GEG +G V G L+ ++K KLD+S Q + +EFL++ + + + NV+
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 126 LVGYYVD-------GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
L+G ++ P+ +L + G LH L + +K V
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPF--MKYGDLHTYL---LYSRLETGPKHIPLQTLLKFMVD 155
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
A G+EYL + +HR++ + N +L DD ++DF LS +
Sbjct: 156 IALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
+G G +G V+ A+K + + FLA+ +++ L+++ +V+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 82
Query: 134 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
P+ ++ E +KGSL D L + + + A G+ ++ ++
Sbjct: 83 PIYIIT-EFMAKGSLLDFLKSDEGSKQPL-------PKLIDFSAQIAEGMAFIEQR---N 131
Query: 194 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
IHR+++++N+L+ + KI+DF L+ D
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIED 163
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 19/145 (13%)
Query: 104 PDQEFLAQVSMVSRLKNENVVELVGYYVDGPLR---VLAYEHASKGSLHDILHXXXXXXX 160
P ++ +++++ +L + NVV+LV +D P + +E ++G + ++
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGPVMEV--------- 128
Query: 161 XXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
LS Q +G+EYLH + +IIHR+IK SN+L+ +D KI+DF +S
Sbjct: 129 -PTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 221 NQAPDAAARLHSTRVLGTFGYHAPE 245
N+ + A L +T +GT + APE
Sbjct: 185 NEFKGSDALLSNT--VGTPAFMAPE 207
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELV------ 127
IG+G +G V+ G R G A+K S ++ A++ L++EN++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 128 -GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + L +EH GSL D L+ +K+A+ A GL +L
Sbjct: 73 NGTWTQLWLVSDYHEH---GSLFDYLNRYTVTVEGM----------IKLALSTASGLAHL 119
Query: 187 H-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGT 238
H + +P I HR++KS N+L+ + I+D L+ + A D + RV GT
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GT 178
Query: 239 FGYHAPE 245
Y APE
Sbjct: 179 KRYMAPE 185
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 31 GGFYVKEAPAKEMKTVT-------------VQPIAVPVISV--------DELKEKTDNFG 69
GGFY+ +P T+ Q ++VP +S D + ++
Sbjct: 134 GGFYI--SPRSTFSTLQELVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLK 191
Query: 70 TNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGY 129
+G G +G V+ A+K + + FLA+ +++ L+++ +V+L
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 130 YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEK 189
P+ ++ E +KGSL D L + + + A G+ ++ ++
Sbjct: 252 VTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL-------PKLIDFSAQIAEGMAFIEQR 303
Query: 190 AEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
IHR+++++N+L+ + KI+DF L+ D
Sbjct: 304 ---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELV------ 127
IG+G +G V+ G R G A+K S ++ A++ L++EN++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 128 -GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + L +EH GSL D L+ +K+A+ A GL +L
Sbjct: 76 NGTWTQLWLVSDYHEH---GSLFDYLNRYTVTVEGM----------IKLALSTASGLAHL 122
Query: 187 H-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGT 238
H + +P I HR++KS N+L+ + I+D L+ + A D + RV GT
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GT 181
Query: 239 FGYHAPE 245
Y APE
Sbjct: 182 KRYMAPE 188
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELV------ 127
IG+G +G V+ G R G A+K S ++ A++ L++EN++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 95
Query: 128 -GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + L +EH GSL D L+ +K+A+ A GL +L
Sbjct: 96 NGTWTQLWLVSDYHEH---GSLFDYLNRYTVTVEGM----------IKLALSTASGLAHL 142
Query: 187 H-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGT 238
H + +P I HR++KS N+L+ + I+D L+ + A D + RV GT
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 KRYMAPE 208
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELV------ 127
IG+G +G V+ G R G A+K S ++ A++ L++EN++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 128 -GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + L +EH GSL D L+ +K+A+ A GL +L
Sbjct: 71 NGTWTQLWLVSDYHEH---GSLFDYLNRYTVTVEGM----------IKLALSTASGLAHL 117
Query: 187 H-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGT 238
H + +P I HR++KS N+L+ + I+D L+ + A D + RV GT
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GT 176
Query: 239 FGYHAPE 245
Y APE
Sbjct: 177 KRYMAPE 183
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELV------ 127
IG+G +G V+ G R G A+K S ++ A++ L++EN++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 128 -GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + L +EH GSL D L+ +K+A+ A GL +L
Sbjct: 70 NGTWTQLWLVSDYHEH---GSLFDYLNRYTVTVEGM----------IKLALSTASGLAHL 116
Query: 187 H-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGT 238
H + +P I HR++KS N+L+ + I+D L+ + A D + RV GT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GT 175
Query: 239 FGYHAPE 245
Y APE
Sbjct: 176 KRYMAPE 182
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 31 GGFYVKEAPAKEMKTVT-------------VQPIAVPVISV--------DELKEKTDNFG 69
GGFY+ +P T+ Q ++VP +S D + ++
Sbjct: 128 GGFYI--SPRSTFSTLQELVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLK 185
Query: 70 TNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGY 129
+G G +G V+ A+K + + FLA+ +++ L+++ +V+L
Sbjct: 186 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 130 YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEK 189
P+ ++ E +KGSL D L + + + A G+ ++ ++
Sbjct: 246 VTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL-------PKLIDFSAQIAEGMAFIEQR 297
Query: 190 AEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
IHR+++++N+L+ + KI+DF L+
Sbjct: 298 ---NYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELV------ 127
IG+G +G V+ G R G A+K S ++ A++ L++EN++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 108
Query: 128 -GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G + L +EH GSL D L+ +K+A+ A GL +L
Sbjct: 109 NGTWTQLWLVSDYHEH---GSLFDYLNRYTVTVEGM----------IKLALSTASGLAHL 155
Query: 187 H-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGT 238
H + +P I HR++KS N+L+ + I+D L+ + A D + RV GT
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GT 214
Query: 239 FGYHAPE 245
Y APE
Sbjct: 215 KRYMAPE 221
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 74 IGEGSYGRVYFGVLR-----SGRAAAIKKL--DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG +G+V +G A+K L D Q + ++ ++ L +E++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 127 VGYYVDGPLRVL--AYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
G D + L E+ GSL D L + AQ + A G+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 131
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
YLH + IHRN+ + NVLL +D + KI DF L+ P+
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 74 IGEGSYGRVYFGVL------RSGRAAAIKKL-DSSKQP-DQEFLAQVSMVSRLKNENVVE 125
+GE +G+VY G L +A AIK L D ++ P +EF + + +RL++ NVV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 126 LVGYYV-DGPLRVLAYEHASKGSLHDIL-------HXXXXXXXXXXXXXLSWAQRVKIAV 177
L+G D PL ++ + + S G LH+ L L V +
Sbjct: 94 LLGVVTKDQPLSMI-FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
A G+EYL + ++H+++ + NVL++D KISD L
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR--ETRPRPSQPSSL 137
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 138 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 74 IGEGSYGRVYFGVL------RSGRAAAIKKL-DSSKQP-DQEFLAQVSMVSRLKNENVVE 125
+GE +G+VY G L +A AIK L D ++ P +EF + + +RL++ NVV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 126 LVGYYV-DGPLRVLAYEHASKGSLHDIL-------HXXXXXXXXXXXXXLSWAQRVKIAV 177
L+G D PL ++ + + S G LH+ L L V +
Sbjct: 77 LLGVVTKDQPLSMI-FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
A G+EYL + ++H+++ + NVL++D KISD L
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 129
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 130 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 74 IGEGSYGRVYFGVLR-----SGRAAAIKKL--DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG +G+V +G A+K L D Q + ++ ++ L +E++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 127 VGYYVDGPLRVL--AYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
G D + L E+ GSL D L + AQ + A G+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 131
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
YLH + IHRN+ + NVLL +D + KI DF L+ P+
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 137
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 138 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR--ETRPRPSQPSSL 152
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 153 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 73 LIGEGSYGRVYFGVLR-SGR---AAAIK--KLDSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L+ G+ AIK K+ +++ ++FL + S++ + + N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G ++ E+ GSL L + Q V + G + G++YL
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ--------FTVIQLVGMLRGISAGMKYL 140
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 234
+ +HR++ + N+L+ + + K+SDF LS D ++TR
Sbjct: 141 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 155
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 156 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 91/175 (52%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVG-YY 130
+G+G++G+VY + +G AA K +++ S++ ++++ ++ +++ + +V+L+G YY
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
DG L ++ E G++ I+ L+ Q + L +LH K
Sbjct: 79 HDGKLWIM-IEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLEALNFLHSK- 128
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
RIIHR++K+ NVL+ + +++DF +S + + S +GT + APE
Sbjct: 129 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPE 179
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 138
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSN 221
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 139 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 138
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 139 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 178
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 179 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 154
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 155 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKL---DSSKQPDQEFLAQVSMVSRL 118
EK +N G L+GEGSYG V + +GR AIKK D K + + ++ ++ +L
Sbjct: 25 EKYENLG---LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
++EN+V L+ L +E L D+ L + K
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL---------ELFPNGLDYQVVQKYLFQ 132
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
G+ + H IIHR+IK N+L+ + K+ DF + A ++ V T
Sbjct: 133 IINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDDEV-AT 187
Query: 239 FGYHAPE 245
Y APE
Sbjct: 188 RWYRAPE 194
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGYY 130
IGEG+YG VY G A+KK+ K+ + + ++S++ LK+ N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
VL +EH + L +L L + G+ Y H++
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL--------DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
R++HR++K N+L+ + KI+DF L+ +A R ++ V+ T Y AP+
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWYRAPD 170
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGYY 130
IGEG+YG VY G A+KK+ K+ + + ++S++ LK+ N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
VL +EH + L +L L + G+ Y H++
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL--------DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
R++HR++K N+L+ + KI+DF L+ +A R ++ V+ T Y AP+
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWYRAPD 170
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLDS--SKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 152
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 153 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 91/175 (52%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVG-YY 130
+G+G++G+VY + +G AA K +++ S++ ++++ ++ +++ + +V+L+G YY
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
DG L ++ E G++ I+ L+ Q + L +LH K
Sbjct: 87 HDGKLWIM-IEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLEALNFLHSK- 136
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
RIIHR++K+ NVL+ + +++DF +S + + S +GT + APE
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPE 187
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 144
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 145 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 57 SVDELKE-KTDNFGTNSLIGEGSYGRVYFGVLR------SGRAAAIKKLD--SSKQPDQE 107
S+ +LKE N +G G++G VY G + S A+K L S+Q + +
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 108 FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL 167
FL + ++S+ ++N+V +G + R + E + G L L L
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSL 164
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLS 220
+ + +A A G +YL E IHR+I + N LL +AKI DF ++
Sbjct: 165 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGYY 130
IGEG+YG VY G A+KK+ K+ + + ++S++ LK+ N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
VL +EH + L +L L + G+ Y H++
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL--------DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
R++HR++K N+L+ + KI+DF L+ +A R ++ ++ T Y AP+
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIV-TLWYRAPD 170
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELV-GYY 130
+G+G++G+VY + + AA K +D+ S++ ++++ ++ +++ + N+V+L+ +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ L +L E + G++ ++ L+ +Q + L YLH+
Sbjct: 105 YENNLWILI-EFCAGGAVDAVM--------LELERPLTESQIQVVCKQTLDALNYLHDN- 154
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+IIHR++K+ N+L D K++DF +S + R S +GT + APE
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPE 205
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 48 VQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLDSS 101
+ P +P E FG +G G++G+V FG+ + A+K L S+
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 102 KQPDQE--FLAQVSMVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXX 158
D++ ++++ ++S L ++EN+V L+G G ++ E+ G L + L
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 159 XXX-----XXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAK 213
LS + + A+G+ +L A IHR++ + NVLL + +AK
Sbjct: 148 LETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAK 204
Query: 214 ISDFDLS 220
I DF L+
Sbjct: 205 IGDFGLA 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELV-GYY 130
+G+G++G+VY + + AA K +D+ S++ ++++ ++ +++ + N+V+L+ +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ L +L E + G++ ++ L+ +Q + L YLH+
Sbjct: 105 YENNLWILI-EFCAGGAVDAVM--------LELERPLTESQIQVVCKQTLDALNYLHDN- 154
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+IIHR++K+ N+L D K++DF +S + R S +GT + APE
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPE 205
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 73 LIGEGSYGRVYFGVLR-SGR---AAAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L+ G+ AIK L + Q +FL++ S++ + + N++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G ++ E+ GSL L + Q V + G G++YL
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRGIGSGMKYL 147
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 234
+ + +HR++ + N+L+ + + K+SDF +S D ++TR
Sbjct: 148 SDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQ---EFLAQVSMVSRLKNENVVELVGY 129
IG+G++G V+ R +G+ A+KK+ + + L ++ ++ LK+ENVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 130 YVDGPLRVLAYEH-ASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
R A + KGS++ D + ++ ++ GL Y
Sbjct: 86 -----CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGTFGYH 242
+H +I+HR++K++NVL+ D + K++DF L+ + A ++ + RV+ T Y
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 196
Query: 243 APE 245
PE
Sbjct: 197 PPE 199
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 100 SSKQPDQEFLAQVSMVSRLKNENVVELV-----GYYVDGPLRVLAYEHASKGSLHDILHX 154
S Q ++E + M K+EN+++ + G ++ L ++ H KGSL D L
Sbjct: 52 QSWQSEREIFSTPGM----KHENLLQFIAAEKRGSNLEVELWLITAFH-DKGSLTDYL-- 104
Query: 155 XXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA--------EPRIIHRNIKSSNVLL 206
++W + +A +RGL YLHE +P I HR+ KS NVLL
Sbjct: 105 --------KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLL 156
Query: 207 FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
D A ++DF L+ + + +GT Y APE
Sbjct: 157 KSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 74 IGEGSYGRVYFGVLR-----SGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVVEL 126
+GEG +G+V +G A+K L + P + ++ ++ L +E++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 127 VGYYVD-GPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
G D G + L E+ GSL D L + AQ + A G+
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 148
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
YLH + IHR++ + NVLL +D + KI DF L+ P+
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQ---EFLAQVSMVSRLKNENVVELVGY 129
IG+G++G V+ R +G+ A+KK+ + + L ++ ++ LK+ENVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 130 YVDGPLRVLAYEH-ASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
R A + KGS++ D + ++ ++ GL Y
Sbjct: 86 -----CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGTFGYH 242
+H +I+HR++K++NVL+ D + K++DF L+ + A ++ + RV+ T Y
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 196
Query: 243 APE 245
PE
Sbjct: 197 PPE 199
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 73 LIGEGSYGRVYFGVLR-SGR---AAAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L+ G+ AIK L + Q +FL++ S++ + + N++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G ++ E+ GSL L + Q V + G G++YL
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRGIGSGMKYL 126
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 234
+ + +HR++ + N+L+ + + K+SDF +S D ++TR
Sbjct: 127 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSK-QPD--QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +GR AIK +D ++ P Q+ +V ++ L + N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L S +++ AV
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVSAV----- 127
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+Y H+K RI+HR++K+ N+LL D KI+DF SN+
Sbjct: 128 -QYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNE 163
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 73 LIGEGSYGRVYFGVLR-SGR---AAAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVEL 126
+IG G +G V G L+ G+ AIK L + Q +FL++ S++ + + N++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
G ++ E+ GSL L + Q V + G G++YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRGIGSGMKYL 132
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 234
+ + +HR++ + N+L+ + + K+SDF +S D ++TR
Sbjct: 133 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQ---EFLAQVSMVSRLKNENVVELVGY 129
IG+G++G V+ R +G+ A+KK+ + + L ++ ++ LK+ENVV L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 130 YVDGPLRVLAYEH-ASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
R A + KGS++ D + ++ ++ GL Y
Sbjct: 85 -----CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGTFGYH 242
+H +I+HR++K++NVL+ D + K++DF L+ + A ++ + RV+ T Y
Sbjct: 140 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 195
Query: 243 APE 245
PE
Sbjct: 196 PPE 198
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 130
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHRN+ + N+L+ +++ KI DF L+ P
Sbjct: 131 LGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLP 166
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSK-QPD--QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +GR AIK +D ++ P Q+ +V ++ L + N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L S +++ AV
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVSAV----- 124
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 242
+Y H+K RI+HR++K+ N+LL D KI+DF SN+ +L + G+ Y
Sbjct: 125 -QYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDT--FCGSPPYA 177
Query: 243 APE 245
APE
Sbjct: 178 APE 180
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 48 VQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLDSS 101
+ P +P E FG +G G++G+V FG+ + A+K L S+
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 79
Query: 102 KQPDQE--FLAQVSMVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXX 158
D++ ++++ ++S L ++EN+V L+G G ++ E+ G L + L
Sbjct: 80 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 139
Query: 159 XXXXXXXX-LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
L + + A+G+ +L A IHR++ + NVLL + +AKI DF
Sbjct: 140 DLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 196
Query: 218 DLS 220
L+
Sbjct: 197 GLA 199
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 74 IGEGSYGRVYFGVL------RSGRAAAIKKL-DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG++G+V+ + A+K L D + ++F + +++ L++E++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXX-------XXXXXLSWAQRVKIAVGA 179
G DG ++ +E+ G L+ L L +Q + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A G+ YL A +HR++ + N L+ + + KI DF +S
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 48 VQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLDSS 101
+ P +P E FG +G G++G+V FG+ + A+K L S+
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 102 KQPDQE--FLAQVSMVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXX 158
D++ ++++ ++S L ++EN+V L+G G ++ E+ G L + L
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 147
Query: 159 XXXXXXXX-LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
L + + A+G+ +L A IHR++ + NVLL + +AKI DF
Sbjct: 148 DLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 204
Query: 218 DLS 220
L+
Sbjct: 205 GLA 207
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 89/175 (50%), Gaps = 17/175 (9%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELV-GYY 130
+G+G++G+VY + + AA K +D+ S++ ++++ ++ +++ + N+V+L+ +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
+ L +L E + G++ ++ L+ +Q + L YLH+
Sbjct: 105 YENNLWILI-EFCAGGAVDAVM--------LELERPLTESQIQVVCKQTLDALNYLHDN- 154
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+IIHR++K+ N+L D K++DF +S + R +GT + APE
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPE 205
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 12/196 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 229
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++ +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 230 LHSTRVLGTFGYHAPE 245
+ L + +PE
Sbjct: 180 RKGGKGLLPVRWMSPE 195
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 12/196 (6%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 229
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++ +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 230 LHSTRVLGTFGYHAPE 245
+ L + +PE
Sbjct: 189 RKGGKGLLPVRWMSPE 204
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 52 AVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQ 103
A V DE + + + +G+GS+G VY GV + AIK ++ +S +
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 104 PDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXX 163
EFL + S++ +VV L+G G ++ E ++G L L
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 164 XXXL-SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
S ++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 176
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDG 133
IG+G YG V+ G R G A+K ++++ ++ +++EN++ + + G
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 134 P----LRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE- 188
L ++ GSL+D L L +K+A + GL +LH
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYL----------KSTTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 189 ----KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH---STRVLGTFGY 241
+ +P I HR++KS N+L+ + I+D L+ + + +TRV GT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 242 HAPE 245
PE
Sbjct: 213 MPPE 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 70 TNSLIGEGSYGRVYFGV-LRSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLK-NENVVEL 126
T+ L+GEG+Y +V V L++G+ A+K ++ + +V + + + N+N++EL
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
+ ++ D L +E GS+ + H A RV V AA L++L
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNERE-----ASRVVRDVAAA--LDFL 127
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDI---AKISDFDLS-----NQAPDAAARLHSTRVLGT 238
H K I HR++K N+L + KI DFDL N + T G+
Sbjct: 128 HTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 239 FGYHAPE 245
Y APE
Sbjct: 185 AEYMAPE 191
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 48 VQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLDSS 101
+ P +P E FG +G G++G+V FG+ + A+K L S+
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 102 KQPDQE--FLAQVSMVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXX 158
D++ ++++ ++S L ++EN+V L+G G ++ E+ G L + L
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 159 XXXXXXXXL-----SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAK 213
+ S + + A+G+ +L A IHR++ + NVLL + +AK
Sbjct: 148 LETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAK 204
Query: 214 ISDFDLS 220
I DF L+
Sbjct: 205 IGDFGLA 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 19/155 (12%)
Query: 73 LIGEGSYGRVYFGV-LRSGRAA----AIKKLDSSKQP--DQEFLAQVSMVSRLKNENVVE 125
++G G++G VY G+ + G AIK L+ + P + EF+ + +++ + + ++V
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L+G + P L + G L + +H L+W ++ A+G+ Y
Sbjct: 105 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLL--LNWCVQI------AKGMMY 155
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
L E+ R++HR++ + NVL+ + KI+DF L+
Sbjct: 156 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 21/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQE-----FLAQVSMVSRLKN 120
D+F +G+G +G VY + K+ Q ++E ++ + + L +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
N++ L Y+ D L E+A +G L+ L + I A
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT---------FDEQRTATIMEELA 133
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
L Y H K ++IHR+IK N+LL KI+DF S AP L + GT
Sbjct: 134 DALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCGTLD 186
Query: 241 YHAPE 245
Y PE
Sbjct: 187 YLPPE 191
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 175
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV-----ELVG 128
+G+G YG V+ G L G + A+K S + ++ L+++N++ ++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH- 187
L ++ + H GSL+D L +++AV AA GL +LH
Sbjct: 75 RNSSTQLWLITHYH-EHGSLYDFLQRQTLEPHLA----------LRLAVSAACGLAHLHV 123
Query: 188 ----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGTFG 240
+ +P I HR+ KS NVL+ + I+D L+ +Q D ++ RV GT
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKR 182
Query: 241 YHAPE 245
Y APE
Sbjct: 183 YMAPE 187
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+YG VY GR A+K++ + + + ++S++ L + N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV-GAARGLEYLHEK 189
L +E K L +L ++KI + RG+ + H+
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQD---------SQIKIYLYQLLRGVAHCHQH 138
Query: 190 AEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
RI+HR++K N+L+ D K++DF L+ +A R ++ V+ T Y AP+
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-TLWYRAPD 189
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 172
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+YG VY GR A+K++ + + + ++S++ L + N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV-GAARGLEYLHEK 189
L +E K L +L ++KI + RG+ + H+
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQD---------SQIKIYLYQLLRGVAHCHQH 138
Query: 190 AEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
RI+HR++K N+L+ D K++DF L+ +A R ++ V+ T Y AP+
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-TLWYRAPD 189
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 48 VQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLDSS 101
+ P +P E FG +G G++G+V FG+ + A+K L S+
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 102 KQPDQE--FLAQVSMVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXX--- 155
D++ ++++ ++S L ++EN+V L+G G ++ E+ G L + L
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPP 147
Query: 156 ----XXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI 211
LS + + A+G+ +L A IHR++ + NVLL + +
Sbjct: 148 GLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHV 204
Query: 212 AKISDFDLS 220
AKI DF L+
Sbjct: 205 AKIGDFGLA 213
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 179
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSG-RAAAIKKLDSSKQP---DQEFLAQVSMVSRLKNE 121
DN+ LIG GSYG VY ++ + AIKK++ + + L ++++++RLK++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA-QRVK-IAVGA 179
++ L + P +L ++ L+ +L + Q VK I
Sbjct: 88 YIIRLHDLII--PEDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
G +++HE IIHR++K +N LL D KI DF L+
Sbjct: 141 LLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 19/155 (12%)
Query: 73 LIGEGSYGRVYFGV-LRSGRAA----AIKKLDSSKQP--DQEFLAQVSMVSRLKNENVVE 125
++G G++G VY G+ + G AIK L+ + P + EF+ + +++ + + ++V
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L+G + P L + G L + +H L+W V A+G+ Y
Sbjct: 82 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLL--LNWC------VQIAKGMMY 132
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
L E+ R++HR++ + NVL+ + KI+DF L+
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV-----ELVG 128
+G+G YG V+ G + G A+K S + ++ L++EN++ ++
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH- 187
+ L ++ + H GSL+D L L ++I + A GL +LH
Sbjct: 104 RHSSTQLWLITHYH-EMGSLYDYLQLTT----------LDTVSCLRIVLSIASGLAHLHI 152
Query: 188 ----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL---HSTRVLGTFG 240
+ +P I HR++KS N+L+ + I+D L+ + +L ++ RV GT
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKR 211
Query: 241 YHAPE 245
Y APE
Sbjct: 212 YMAPE 216
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N ++ +D KI DF ++
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSK-QPD--QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +GR A+K +D ++ P Q+ +V ++ L + N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L + + V A
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA------KFRQIVSA--- 126
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 127 VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNE 163
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 56 ISVDELKEKTD--------NFGTNSLIGEGSYGRVYFGVL--RSGRAA----AIKKLDSS 101
+SVD K D N +GEG +G+V GRA A+K L +
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 102 KQPDQ--EFLAQVSMVSRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXXXX 158
P + + L++ +++ ++ + +V++L G DGPL +L E+A GSL L
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL-LLIVEYAKYGSLRGFLRESRKV 123
Query: 159 ---------------XXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSN 203
L+ + A ++G++YL AE +++HR++ + N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 204 VLLFDDDIAKISDFDLSN 221
+L+ + KISDF LS
Sbjct: 181 ILVAEGRKMKISDFGLSR 198
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Query: 74 IGEGSYGRVYFGVLR-----SGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVVEL 126
+GEG +G+V +G A+K L P + ++ ++ L +E++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 127 VGYYVD-GPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
G D G V L E+ GSL D L + AQ + A G+
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQLLLFAQQICEGMA 125
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
YLH + IHR + + NVLL +D + KI DF L+ P+
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 164
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 160
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 161 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 136
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 137 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 172
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 129
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 128
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 129 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 164
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 56 ISVDELKEKTD--------NFGTNSLIGEGSYGRVYFGVL--RSGRAA----AIKKLDSS 101
+SVD K D N +GEG +G+V GRA A+K L +
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 102 KQPDQ--EFLAQVSMVSRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXXXX 158
P + + L++ +++ ++ + +V++L G DGPL +L E+A GSL L
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL-LLIVEYAKYGSLRGFLRESRKV 123
Query: 159 ---------------XXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSN 203
L+ + A ++G++YL AE +++HR++ + N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 204 VLLFDDDIAKISDFDLSN 221
+L+ + KISDF LS
Sbjct: 181 ILVAEGRKMKISDFGLSR 198
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Query: 74 IGEGSYGRVYFGVLR-----SGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVVEL 126
+GEG +G+V +G A+K L P + ++ ++ L +E++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 127 VGYYVD-GPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
G D G V L E+ GSL D L + AQ + A G+
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQLLLFAQQICEGMA 126
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
YLH + IHR + + NVLL +D + KI DF L+ P+
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 165
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV-----ELVG 128
+G+G YG V+ G + G A+K S + ++ L++EN++ ++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH- 187
+ L ++ + H GSL+D L L ++I + A GL +LH
Sbjct: 75 RHSSTQLWLITHYH-EMGSLYDYLQLTT----------LDTVSCLRIVLSIASGLAHLHI 123
Query: 188 ----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL---HSTRVLGTFG 240
+ +P I HR++KS N+L+ + I+D L+ + +L ++ RV GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKR 182
Query: 241 YHAPE 245
Y APE
Sbjct: 183 YMAPE 187
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQ---EFLAQVSMVSRLKNENVVELVGY 129
IG+G++G V+ R +G+ A+KK+ + + L ++ ++ LK+ENVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 130 YVDGPLRVLAYEH----ASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
R A + AS + D + ++ ++ GL Y
Sbjct: 86 -----CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGTFGYH 242
+H +I+HR++K++NVL+ D + K++DF L+ + A ++ + RV+ T Y
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 196
Query: 243 APE 245
PE
Sbjct: 197 PPE 199
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 129
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 135
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 136 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 171
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV-----ELVG 128
+G+G YG V+ G + G A+K S + ++ L++EN++ ++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH- 187
+ L ++ + H GSL+D L L ++I + A GL +LH
Sbjct: 75 RHSSTQLWLITHYH-EMGSLYDYLQLTT----------LDTVSCLRIVLSIASGLAHLHI 123
Query: 188 ----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL---HSTRVLGTFG 240
+ +P I HR++KS N+L+ + I+D L+ + +L ++ RV GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKR 182
Query: 241 YHAPE 245
Y APE
Sbjct: 183 YMAPE 187
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 132
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 134
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 135 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 170
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 133
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 134 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 169
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 129
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 147
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 183
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 147
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 183
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIKLLQYTSQICKGMEY 127
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 128 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 163
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E+ GSL D L + + ++ +G+EY
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--------IDHIKLLQYTSQICKGMEY 132
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 74 IGEGSYGRVYFGVL------RSGRAAAIKKL-DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG++G+V+ + A+K L ++S+ Q+F + +++ L+++++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------LSWAQRVKIAVGAA 180
G +G ++ +E+ G L+ L L Q + +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
G+ YL A +HR++ + N L+ + KI DF +S
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 67 NFGTNSLIGEGSYGRVY-FGVLRSGRAAAIKK------LDSSKQPDQEFLAQVSMVSRLK 119
NF IG G + VY L G A+KK +D+ + D + ++ ++ +L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD--CIKEIDLLKQLN 90
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ NV++ +++ + E A G L ++ + W K V
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-W----KYFVQL 145
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
LE++H + R++HR+IK +NV + + K+ D L HS ++GT
Sbjct: 146 CSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTP 200
Query: 240 GYHAPE 245
Y +PE
Sbjct: 201 YYMSPE 206
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 129
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
YL+ K + +HR++ + N ++ D KI DF ++ + A + L + AP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 245 E 245
E
Sbjct: 202 E 202
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 129
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVS 116
K++ ++F ++GEGS+ V L + R AIK L+ + + V+ ++S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
RL + V+L + D +A G L + R A
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA 117
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
LEYLH K IIHR++K N+LL +D +I+DF + + + + +
Sbjct: 118 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 237 GTFGYHAPE 245
GT Y +PE
Sbjct: 174 GTAQYVSPE 182
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIK---KLDSSKQPDQE-FLAQVSMVSRLK 119
+D + ++G+GS+G V + +G+ A+K K ++ D+E L +V ++ +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ N+++L ++ D L E + G L D + S +I
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAARIIRQV 141
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++ +
Sbjct: 142 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDK--I 195
Query: 237 GTFGYHAPE 245
GT Y APE
Sbjct: 196 GTAYYIAPE 204
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 128
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
YL+ K + +HRN+ + N ++ D KI DF ++
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT 178
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 126
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 19 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 78
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 79 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 132
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 133 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 74 IGEGSYGRVYFGVL------RSGRAAAIKKL-DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG++G+V+ + A+K L ++S+ Q+F + +++ L+++++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------LSWAQRVKIAVGAA 180
G +G ++ +E+ G L+ L L Q + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
G+ YL A +HR++ + N L+ + KI DF +S
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 123
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVS 116
K++ ++F ++GEGS+ V L + R AIK L+ + + V+ ++S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
RL + V+L + D +A G L + R A
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA 116
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
LEYLH K IIHR++K N+LL +D +I+DF + + + + +
Sbjct: 117 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 237 GTFGYHAPE 245
GT Y +PE
Sbjct: 173 GTAQYVSPE 181
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 20 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 133
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 7 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 66
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 117
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 118 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
YL+ K + +HRN+ + N ++ D KI DF ++
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT 177
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 23 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 82
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 133
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 134 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 59 DELKEKTDNFGTNSLIGEGSYGRVYFGVLRS------GRAAAIKKLD--SSKQPDQEFLA 110
DE + + + +G+GS+G VY GV + AIK ++ +S + EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXX-XXXXXXXXXXLSW 169
+ S++ +VV L+G G ++ E ++G L L S
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ +++A A G+ YL+ + +HR++ + N + +D KI DF ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMT 172
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 129
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W
Sbjct: 73 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 123
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 17 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W ++
Sbjct: 77 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 130
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 131 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 38 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 97
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 148
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKK-LDSSKQP--DQEFLAQVSMVS 116
+ EK + G IGEGSYG V+ R +G+ AIKK L+S P + L ++ M+
Sbjct: 1 MMEKYEKIGK---IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLK 57
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+LK+ N+V L+ + L +E+ LH+ L ++W
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE-LDRYQRGVPEHLVKSITWQ------ 110
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
+ + + H+ IHR++K N+L+ + K+ DF
Sbjct: 111 --TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDF 146
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVS 116
K++ ++F ++GEGS+ V L + R AIK L+ + + V+ ++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
RL + V+L + D +A G L + R A
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA 115
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
LEYLH K IIHR++K N+LL +D +I+DF + + + + +
Sbjct: 116 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 237 GTFGYHAPE 245
GT Y +PE
Sbjct: 172 GTAQYVSPE 180
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 74 IGEGSYGRVYFGVL------RSGRAAAIKKL-DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG++G+V+ + A+K L ++S+ Q+F + +++ L+++++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 127 VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------LSWAQRVKIAVGAA 180
G +G ++ +E+ G L+ L L Q + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
G+ YL A +HR++ + N L+ + KI DF +S
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 128
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 14 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W
Sbjct: 74 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 124
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 129
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVS 116
K++ ++F ++GEGS+ V L + R AIK L+ + + V+ ++S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
RL + V+L + D +A G L + R A
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA 114
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
LEYLH K IIHR++K N+LL +D +I+DF + + + + +
Sbjct: 115 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 237 GTFGYHAPE 245
GT Y +PE
Sbjct: 171 GTAQYVSPE 179
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 34/195 (17%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLRS---GRAAAIK--------KLDSSKQPDQEFLA 110
K +F +G GS+GRV+ ++RS GR A+K +L + + E L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL- 58
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
M+S + + ++ + G + D + ++ G L +L
Sbjct: 59 ---MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY---- 111
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
A LEYLH K II+R++K N+LL + KI+DF + PD L
Sbjct: 112 -----AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL 163
Query: 231 HSTRVLGTFGYHAPE 245
GT Y APE
Sbjct: 164 -----CGTPDYIAPE 173
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 56 ISVDELKEKTD--------NFGTNSLIGEGSYGRVYFGVL--RSGRAA----AIKKLDSS 101
+SVD K D N +GEG +G+V GRA A+K L +
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 102 KQPDQ--EFLAQVSMVSRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXXXX 158
P + + L++ +++ ++ + +V++L G DGPL +L E+A GSL L
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL-LLIVEYAKYGSLRGFLRESRKV 123
Query: 159 ---------------XXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSN 203
L+ + A ++G++YL AE ++HR++ + N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARN 180
Query: 204 VLLFDDDIAKISDFDLSN 221
+L+ + KISDF LS
Sbjct: 181 ILVAEGRKMKISDFGLSR 198
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLD--YVREHKDNIGSQYLLNWC------ 123
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
YL+ K + +HR++ + N ++ D KI DF ++ + + L + AP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 245 E 245
E
Sbjct: 202 E 202
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
YL+ K + +HR++ + N ++ D KI DF ++ + + L + AP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 245 E 245
E
Sbjct: 202 E 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 73 LIGE-GSYGRVYFGVLR-SGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELV-G 128
+IGE G +G+VY + + AA K +D+ S++ ++++ ++ +++ + N+V+L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 188
+Y + L +L E + G++ ++ L+ +Q + L YLH+
Sbjct: 76 FYYENNLWILI-EFCAGGAVDAVM--------LELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 189 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+IIHR++K+ N+L D K++DF +S + + + +GT + APE
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPE 179
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
YL+ K + +HR++ + N ++ D KI DF ++ + + L + AP
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 245 E 245
E
Sbjct: 199 E 199
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 14 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W
Sbjct: 74 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLD--YVREHKDNIGSQYLLNWC------ 124
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENV 123
+D + ++G G V+ LR R A+K L + D F + R + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRF----RREAQNA 66
Query: 124 VEL-----VGYYVDG-------PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
L V Y G PL + E+ +L DI+H ++ +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKR 117
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+++ A + L + H+ IIHR++K +N+L+ + K+ DF ++ D+ +
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX 174
Query: 232 ST-RVLGTFGYHAPE 245
T V+GT Y +PE
Sbjct: 175 QTAAVIGTAQYLSPE 189
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 32/181 (17%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSGRAAAI------KKLDSSKQPDQEFLAQVSMV 115
+N ++G G++G+V +G+ ++G + + +K DSS++ + ++++ M+
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER--EALMSELKMM 102
Query: 116 SRL-KNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------- 166
++L +EN+V L+G + GP+ L +E+ G L + L
Sbjct: 103 TQLGSHENIVNLLGACTLSGPI-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 167 -------LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
L++ + A A+G+E+L K+ +HR++ + NVL+ + KI DF L
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 220 S 220
+
Sbjct: 219 A 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENV 123
+D + ++G G V+ LR R A+K L + D F + R + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRF----RREAQNA 66
Query: 124 VEL-----VGYYVDG-------PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
L V Y G PL + E+ +L DI+H ++ +
Sbjct: 67 AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKR 117
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+++ A + L + H+ IIHR++K +N+++ + K+ DF ++ D+ +
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 232 ST-RVLGTFGYHAPE 245
T V+GT Y +PE
Sbjct: 175 QTAAVIGTAQYLSPE 189
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIK---KLDSSKQPDQE-FLAQVSMVSRLK 119
+D + ++G+GS+G V + +G+ A+K K ++ D+E L +V ++ +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ N+++L ++ D L E + G L D + S +I
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAARIIRQV 158
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++ +
Sbjct: 159 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDK--I 212
Query: 237 GTFGYHAPE 245
GT Y APE
Sbjct: 213 GTAYYIAPE 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 26/184 (14%)
Query: 59 DELKEKTDN-------FGTNSLIGEGSYGRVYFGVLRSGRAAAIK------KLDSSKQPD 105
DELKEK ++ F ++G+G +G V L+ + +K K D D
Sbjct: 9 DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD 68
Query: 106 -QEFLAQVSMVSRLKNENVVELVGYYVDG------PLRVLAYEHASKGSLHDILHXXXXX 158
+EFL + + + + +V +LVG + P+ ++ G LH L
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL---LAS 125
Query: 159 XXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFD 218
L V+ V A G+EYL + IHR++ + N +L +D ++DF
Sbjct: 126 RIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFG 182
Query: 219 LSNQ 222
LS +
Sbjct: 183 LSRK 186
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIK---KLDSSKQPDQE-FLAQVSMVSRLK 119
+D + ++G+GS+G V + +G+ A+K K ++ D+E L +V ++ +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ N+++L ++ D L E + G L D + S +I
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAARIIRQV 135
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++ +
Sbjct: 136 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDK--I 189
Query: 237 GTFGYHAPE 245
GT Y APE
Sbjct: 190 GTAYYIAPE 198
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIK---KLDSSKQPDQE-FLAQVSMVSRLK 119
+D + ++G+GS+G V + +G+ A+K K ++ D+E L +V ++ +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ N+++L ++ D L E + G L D + S +I
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAARIIRQV 159
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++ +
Sbjct: 160 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDK--I 213
Query: 237 GTFGYHAPE 245
GT Y APE
Sbjct: 214 GTAYYIAPE 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 60 ELKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKL------DSSKQPDQEFLAQV 112
++K + + +GEG + VY + + + AIKK+ ++ ++ L ++
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 113 SMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQ 171
++ L + N++ L+ A+ H S SL D + L+ +
Sbjct: 64 KLLQELSHPNIIGLLD----------AFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH 113
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+ +GLEYLH+ I+HR++K +N+LL ++ + K++DF L+ ++ + R +
Sbjct: 114 IKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLA-KSFGSPNRAY 169
Query: 232 STRVLGTFGYHAPE 245
+V+ T Y APE
Sbjct: 170 XHQVV-TRWYRAPE 182
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 10 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 69
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 123
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 124 ---AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 162
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
+G++Y+H K ++IHR++K SN+ L D KI DF L + R TR GT
Sbjct: 146 TKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTL 199
Query: 240 GYHAPE 245
Y +PE
Sbjct: 200 RYMSPE 205
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 74 IGEGSYGR-VYFGVLRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGY 129
IGEGS+G+ + GR IK+++ S+ +E +V++++ +K+ N+V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 130 YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEK 189
+ + + ++ G L ++ L W ++ +A L+++H++
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWFVQICLA------LKHVHDR 144
Query: 190 AEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+I+HR+IKS N+ L D ++ DF ++ + ++ L + +GT Y +PE
Sbjct: 145 ---KILHRDIKSQNIFLTKDGTVQLGDFGIA-RVLNSTVEL-ARACIGTPYYLSPE 195
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 12 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 65
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 123
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 124 QF----------LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D A +TR Y APE
Sbjct: 171 TDDEMAGFVATR-----WYRAPE 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENV 123
+D + ++G G V+ LR R A+K L + D F + R + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRF----RREAQNA 66
Query: 124 VEL-----VGYYVDG-------PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
L V Y G PL + E+ +L DI+H ++ +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKR 117
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+++ A + L + H+ IIHR++K +N+++ + K+ DF ++ D+ +
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 232 ST-RVLGTFGYHAPE 245
T V+GT Y +PE
Sbjct: 175 QTAAVIGTAQYLSPE 189
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENV 123
+D + ++G G V+ LR R A+K L + D F + R + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRF----RREAQNA 66
Query: 124 VEL-----VGYYVDG-------PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
L V Y G PL + E+ +L DI+H ++ +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKR 117
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+++ A + L + H+ IIHR++K +N+++ + K+ DF ++ D+ +
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 232 ST-RVLGTFGYHAPE 245
T V+GT Y +PE
Sbjct: 175 QTAAVIGTAQYLSPE 189
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 61/202 (30%)
Query: 74 IGEGSYGRVY----------FGVLRSGRA---------------AAIKKLDSSKQPDQEF 108
IGEG+YG+V+ F L+ R A ++ L++ + P+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 109 LAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
L V VSR E + LV +VD L + G + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--------------- 123
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
+ RGL++LH R++HR++K N+L+ K++DF L A
Sbjct: 124 -----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------A 167
Query: 229 RLHS-----TRVLGTFGYHAPE 245
R++S T V+ T Y APE
Sbjct: 168 RIYSFQMALTSVVVTLWYRAPE 189
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +G+ A+K +D ++ Q+ +V ++ L + N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
+V+L L E+AS G + D L W + K A R
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH------------GWMKE-KEARAKFRQ 114
Query: 182 ---GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 155
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
KI + + L +L E +IIHR+IK SN+LL K+ DF +S Q D+ A+ T
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---T 183
Query: 234 RVLGTFGYHAPE 245
R G Y APE
Sbjct: 184 RDAGCRPYMAPE 195
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D A +TR Y APE
Sbjct: 175 TDDEMAGFVATR-----WYRAPE 192
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D A +TR Y APE
Sbjct: 175 TDDEMAGFVATR-----WYRAPE 192
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 123
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
V A+G+ YL ++ R++HR++ + NVL+ KI+DF
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++ +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-IN 107
Query: 129 YYVDGPL-----RVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
+ P V H L+ +L LS RGL
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLL----------KTQHLSNDHICYFLYQILRGL 157
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYH 242
+Y+H ++HR++K SN+LL KI DF L+ A PD T + T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 243 APE 245
APE
Sbjct: 215 APE 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 48 VQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLDSS 101
+ P +P E FG +G G++G+V FG+ + A+K L S+
Sbjct: 15 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 72
Query: 102 KQPDQE--FLAQVSMVSRL-KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXX 158
D++ ++++ ++S L ++EN+V L+G G ++ E+ G L + L
Sbjct: 73 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 132
Query: 159 XXXXXXXX--------------LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNV 204
L + + A+G+ +L K IHR++ + NV
Sbjct: 133 MLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNV 189
Query: 205 LLFDDDIAKISDFDLS 220
LL + +AKI DF L+
Sbjct: 190 LLTNGHVAKIGDFGLA 205
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 125
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
V A+G+ YL ++ R++HR++ + NVL+ KI+DF
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 20 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 130
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
V A+G+ YL ++ R++HR++ + NVL+ KI+DF
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 61/202 (30%)
Query: 74 IGEGSYGRVY----------FGVLRSGRA---------------AAIKKLDSSKQPDQEF 108
IGEG+YG+V+ F L+ R A ++ L++ + P+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 109 LAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
L V VSR E + LV +VD L + G + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--------------- 123
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
+ RGL++LH R++HR++K N+L+ K++DF L A
Sbjct: 124 -----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------A 167
Query: 229 RLHS-----TRVLGTFGYHAPE 245
R++S T V+ T Y APE
Sbjct: 168 RIYSFQMALTSVVVTLWYRAPE 189
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
YL+ K + +HR++ + N ++ D KI DF ++
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT 176
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +G+ A+K +D ++ Q+ +V ++ L + N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L + + V A
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA------KFRQIVSA--- 125
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 17 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W
Sbjct: 77 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 127
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
V A+G+ YL ++ R++HR++ + NVL+ KI+DF
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 35/197 (17%)
Query: 67 NFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
+F LIG G +G+V+ R G+ IK++ K +++ +V +++L + N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVH 68
Query: 126 LVGYYVDG-----------------PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
G + DG + E KG+L + L
Sbjct: 69 YNGCW-DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-------LD 120
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
+++ +G++Y+H K ++I+R++K SN+ L D KI DF L +
Sbjct: 121 KVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 229 RLHSTRVLGTFGYHAPE 245
R S GT Y +PE
Sbjct: 178 RXRSK---GTLRYMSPE 191
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 83/217 (38%), Gaps = 71/217 (32%)
Query: 65 TDNFGTNSLIGEGSYGRVY---------FGVLRSGRA------------------AAIKK 97
T + + IG G+YG VY F L+S R A +++
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 98 LDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKG----SLHDILH 153
L++ + P+ L V SR E V LV +VD LR + G ++ D++
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 154 XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAK 213
RGL++LH I+HR++K N+L+ K
Sbjct: 128 QFL------------------------RGLDFLHANC---IVHRDLKPENILVTSGGTVK 160
Query: 214 ISDFDLSNQAPDAAARLHS-----TRVLGTFGYHAPE 245
++DF L AR++S T V+ T Y APE
Sbjct: 161 LADFGL--------ARIYSYQMALTPVVVTLWYRAPE 189
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +G+ A+K +D ++ Q+ +V ++ L + N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L + + V A
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA------KFRQIVSA--- 125
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W
Sbjct: 75 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 125
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
V A+G+ YL ++ R++HR++ + NVL+ KI+DF
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 61/202 (30%)
Query: 74 IGEGSYGRVY----------FGVLRSGRA---------------AAIKKLDSSKQPDQEF 108
IGEG+YG+V+ F L+ R A ++ L++ + P+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 109 LAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
L V VSR E + LV +VD L + G + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--------------- 123
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
+ RGL++LH R++HR++K N+L+ K++DF L A
Sbjct: 124 -----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------A 167
Query: 229 RLHS-----TRVLGTFGYHAPE 245
R++S T V+ T Y APE
Sbjct: 168 RIYSFQMALTSVVVTLWYRAPE 189
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +G+ A+K +D ++ Q+ +V ++ L + N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L + + V A
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA------KFRQIVSA--- 125
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+ L +EH + D+ L + ++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ----DLKTFMDASALTGIPLPLIKSYLFQL----LQ 113
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T Y
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLWY 168
Query: 242 HAPE 245
APE
Sbjct: 169 RAPE 172
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQ---PDQEFLAQVSMVSRLKNE 121
DN+ LIG GSYG VY + + + AIKK++ + + L ++++++RLK++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR--VKIAVGA 179
++ L + P +L ++ L+ +L + + I
Sbjct: 86 YIIRLYDLII--PDDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNL 138
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
G ++HE IIHR++K +N LL D K+ DF L+
Sbjct: 139 LLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W
Sbjct: 75 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 125
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
V A+G+ YL ++ R++HR++ + NVL+ KI+DF
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELV 127
+G+G++G V +G A+KKL S+++ ++F ++ ++ L+++N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 128 GYYVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
G R L E GSL + L + + ++ +G+EY
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--------IDHIKLLQYTSQICKGMEY 132
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENV 123
+D + ++G G V+ LR R A+K L + D F + R + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRF----RREAQNA 66
Query: 124 VEL-----VGYYVDG-------PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
L V Y G PL + E+ +L DI+H ++ +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKR 117
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+++ A + L + H+ IIHR++K +N+++ + K+ DF ++ D+ +
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 232 ST-RVLGTFGYHAPE 245
T V+GT Y +PE
Sbjct: 175 QTAAVIGTAQYLSPE 189
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKK--LDSSKQPDQEFLAQVSMVSRLKNEN 122
D++ +IG G+ V + AIK+ L+ + E L ++ +S+ + N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V +V L + S GS+ DI+ L + I G
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDII-KHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
LEYLH+ + IHR++K+ N+LL +D +I+DF +S
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 74 IGEGSYGRVYFGVLR---SGRA---AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVVE 125
+G+GS+G VY G R G A A+K ++ S + EFL + S++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-VKIAVGAARGLE 184
L+G G ++ E + G L L Q +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
YL+ K + +HR++ + N ++ D KI DF ++
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENV 123
+D + ++G G V+ LR R A+K L + D F + R + +N
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRF----RREAQNA 83
Query: 124 VEL-----VGYYVDG-------PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
L V Y G PL + E+ +L DI+H ++ +
Sbjct: 84 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKR 134
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+++ A + L + H+ IIHR++K +N+++ + K+ DF ++ D+ +
Sbjct: 135 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 191
Query: 232 ST-RVLGTFGYHAPE 245
T V+GT Y +PE
Sbjct: 192 QTAAVIGTAQYLSPE 206
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++G G++G VY G+ + AI +L + P ++E L + +++
Sbjct: 47 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMA 106
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 107 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 157
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 199
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+ L +EH + D+ L + ++ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQ----DLKKFMDASALTGIPLPLIKSYLFQL----LQ 117
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 172
Query: 242 HAPE 245
APE
Sbjct: 173 RAPE 176
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 89 SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSL 148
S A +++L + + + L +VS + N+++L Y L ++ KG L
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 149 HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD 208
D L LS + KI + LH+ I+HR++K N+LL D
Sbjct: 112 FDYL---------TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDD 159
Query: 209 DDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
D K++DF S Q D +L S V GT Y APE
Sbjct: 160 DMNIKLTDFGFSCQL-DPGEKLRS--VCGTPSYLAPE 193
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 68/214 (31%)
Query: 65 TDNFGTNSLIGEGSYGRVY---------FGVLRSGRA---------------AAIKKLDS 100
T + + IG G+YG VY F L+S R A +++L++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 101 SKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKG----SLHDILHXXX 156
+ P+ L V SR E V LV +VD LR + G ++ D++
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 157 XXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISD 216
RGL++LH I+HR++K N+L+ K++D
Sbjct: 123 ------------------------RGLDFLHANC---IVHRDLKPENILVTSGGTVKLAD 155
Query: 217 FDLSNQAPDAAARLHSTR-----VLGTFGYHAPE 245
F L AR++S + V+ T Y APE
Sbjct: 156 FGL--------ARIYSYQMALDPVVVTLWYRAPE 181
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 68/214 (31%)
Query: 65 TDNFGTNSLIGEGSYGRVY---------FGVLRSGRA---------------AAIKKLDS 100
T + + IG G+YG VY F L+S R A +++L++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 101 SKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKG----SLHDILHXXX 156
+ P+ L V SR E V LV +VD LR + G ++ D++
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 157 XXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISD 216
RGL++LH I+HR++K N+L+ K++D
Sbjct: 123 ------------------------RGLDFLHANC---IVHRDLKPENILVTSGGTVKLAD 155
Query: 217 FDLSNQAPDAAARLHSTR-----VLGTFGYHAPE 245
F L AR++S + V+ T Y APE
Sbjct: 156 FGL--------ARIYSYQMALFPVVVTLWYRAPE 181
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +G+ A+K +D ++ Q+ +V + L + N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L + + V A
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA------KFRQIVSA--- 125
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNE 162
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 68/214 (31%)
Query: 65 TDNFGTNSLIGEGSYGRVY---------FGVLRSGRA---------------AAIKKLDS 100
T + + IG G+YG VY F L+S R A +++L++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 101 SKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKG----SLHDILHXXX 156
+ P+ L V SR E V LV +VD LR + G ++ D++
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 157 XXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISD 216
RGL++LH I+HR++K N+L+ K++D
Sbjct: 123 ------------------------RGLDFLHANC---IVHRDLKPENILVTSGGTVKLAD 155
Query: 217 FDLSNQAPDAAARLHSTR-----VLGTFGYHAPE 245
F L AR++S + V+ T Y APE
Sbjct: 156 FGL--------ARIYSYQMALAPVVVTLWYRAPE 181
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 25/193 (12%)
Query: 63 EKTD--NFGTNSLIGEGSYGRVYF--GVLR--SGRAAAIKKLDSSKQPDQEFLAQVSMVS 116
EK D +F ++G+GS+G+V+ V R SG A+K L A + +
Sbjct: 23 EKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKK---------ATLKVRD 73
Query: 117 RLKNENVVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXX--XXXXXXXXXXLSWAQRV 173
R++ + +++ V+ P V L Y ++G L+ IL + + V
Sbjct: 74 RVRTKMERDILAD-VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 132
Query: 174 KIAVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
K + A GL++LH II+R++K N+LL ++ K++DF LS +A D + +S
Sbjct: 133 KFYLAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS 189
Query: 233 TRVLGTFGYHAPE 245
GT Y APE
Sbjct: 190 --FCGTVEYMAPE 200
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++ G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 13 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 123
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 10/186 (5%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGR-AAAIKK--LDSSKQPDQEFLAQVSMVSRLKNEN 122
D++ +IG G+ V + AIK+ L+ + E L ++ +S+ + N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V +V L + S GS+ DI+ L + I G
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV-LDESTIATILREVLEG 133
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGTF 239
LEYLH+ + IHR++K+ N+LL +D +I+DF +S D +GT
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 240 GYHAPE 245
+ APE
Sbjct: 191 CWMAPE 196
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++ G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 20 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++++ + G L D + L+W ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD--YVREHKDNIGSQYLLNWCVQI--- 133
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 56 ISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQE---FLAQV 112
I + E + LIG+G +G+VY G R AI+ +D + + + F +V
Sbjct: 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHG--RWHGEVAIRLIDIERDNEDQLKAFKREV 80
Query: 113 SMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+ ++ENVV +G + P + +L+ ++ L +
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR--------DAKIVLDVNKT 132
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
+IA +G+ YLH K I+H+++KS NV +D+ I+DF L
Sbjct: 133 RQIAQEIVKGMGYLHAKG---ILHKDLKSKNV-FYDNGKVVITDFGL 175
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 143
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 241 YHAPE 245
Y +PE
Sbjct: 201 YVSPE 205
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 143
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 241 YHAPE 245
Y +PE
Sbjct: 201 YVSPE 205
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 147
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 148 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 241 YHAPE 245
Y +PE
Sbjct: 205 YVSPE 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 142
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 241 YHAPE 245
Y +PE
Sbjct: 200 YVSPE 204
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 30 PGGFYVKEAPAKEMKTVTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY-FGVLR 88
P G K AP KE+ V V P + +G+G + + Y +
Sbjct: 2 PLGSDPKSAPLKEIPDVLVDP------------RTMKRYMRGRFLGKGGFAKCYEITDMD 49
Query: 89 SGRAAAIKKLDSSK--QPDQE--FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHAS 144
+ A K + S +P Q+ ++++ L N +VV G++ D + E
Sbjct: 50 TKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICR 109
Query: 145 KGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNV 204
+ SL + LH + R I +G++YLH R+IHR++K N+
Sbjct: 110 RRSLLE-LHKRRKAVTEPEA---RYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNL 157
Query: 205 LLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
L DD KI DF L+ + R + GT Y APE
Sbjct: 158 FLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPE 196
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET--------CTRFYTA-EIV 142
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 241 YHAPE 245
Y +PE
Sbjct: 200 YVSPE 204
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 140
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 241 YHAPE 245
Y +PE
Sbjct: 198 YVSPE 202
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 140
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 241 YHAPE 245
Y +PE
Sbjct: 198 YVSPE 202
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 142
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 241 YHAPE 245
Y +PE
Sbjct: 200 YVSPE 204
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 85
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 86 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 142
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 241 YHAPE 245
Y +PE
Sbjct: 200 YVSPE 204
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + + A+ V
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVS------ 143
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 241 YHAPE 245
Y +PE
Sbjct: 200 YVSPE 204
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQP--DQEFLAQVSMVS 116
K F ++ G++G VY G+ + AIK+L + P ++E L + +++
Sbjct: 20 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 117 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N +V L+G + ++ L + G L D + L+W
Sbjct: 80 SVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD--YVREHKDNIGSQYLLNWC------ 130
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 89
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 90 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 145
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 146 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 241 YHAPE 245
Y +PE
Sbjct: 203 YVSPE 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 124
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 125 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 241 YHAPE 245
Y +PE
Sbjct: 182 YVSPE 186
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 28/196 (14%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQP--DQEFLAQVSMVSRLKNE 121
+ +F SL+GEG+YG V + +G AIKK++ +P L ++ ++ K+E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 122 NVVELVGYYVDGPLR----VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
N++ + V + + LH ++ + VK+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--------R 229
G+ +IHR++K SN+L+ + K+ DF L+ ++AA +
Sbjct: 130 GS-------------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 230 LHSTRVLGTFGYHAPE 245
T + T Y APE
Sbjct: 177 SGMTEXVATRWYRAPE 192
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +G+ A++ +D ++ Q+ +V ++ L + N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L + + V A
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA------KFRQIVSA--- 125
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 31/215 (14%)
Query: 36 KEAPAKEMKTVTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY-FGVLRSGRAAA 94
K AP KE+ V V P + +G+G + + Y + + A
Sbjct: 24 KSAPLKEIPDVLVDP------------RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 95 IKKLDSSK--QPDQE--FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHD 150
K + S +P Q+ ++++ L N +VV G++ D + E + SL +
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
Query: 151 ILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD 210
LH + R I +G++YLH R+IHR++K N+ L DD
Sbjct: 132 -LHKRRKAVTEPEA---RYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNLFLNDDM 179
Query: 211 IAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
KI DF L+ + R + GT Y APE
Sbjct: 180 DVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPE 212
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 85
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 86 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 140
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 241 YHAPE 245
Y +PE
Sbjct: 198 YVSPE 202
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNEN 122
N+ IG+G++ +V + +G+ A++ +D ++ Q+ +V ++ L + N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V+L L E+AS G + D L + + V A
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA------KFRQIVSA--- 125
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
++Y H+K I+HR++K+ N+LL D KI+DF SN+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + + A+ V
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVS------ 143
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 241 YHAPE 245
Y +PE
Sbjct: 200 YVSPE 204
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 31/215 (14%)
Query: 36 KEAPAKEMKTVTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY-FGVLRSGRAAA 94
K AP KE+ V V P + +G+G + + Y + + A
Sbjct: 24 KSAPLKEIPDVLVDP------------RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 95 IKKLDSSK--QPDQE--FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHD 150
K + S +P Q+ ++++ L N +VV G++ D + E + SL +
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
Query: 151 ILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD 210
LH + R I +G++YLH R+IHR++K N+ L DD
Sbjct: 132 -LHKRRKAVTEPEA---RYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNLFLNDDM 179
Query: 211 IAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
KI DF L+ + R + + GT Y APE
Sbjct: 180 DVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPE 212
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S IG G+YG V ++G A+KKL +P Q +
Sbjct: 21 TIWEVPERYQNL---SPIGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 74
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 132
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 133 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 180 TDDEMTGYVATR-----WYRAPE 197
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 33/197 (16%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------AQVS 113
+ E + + T S +G G+YG V ++SG A+KKL +P Q + ++
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKL---SRPFQSIIHAKRTYRELR 102
Query: 114 MVSRLKNENVVELVGYYVDGPL-----RVLAYEHASKGSLHDILHXXXXXXXXXXXXXLS 168
++ +K+ENV+ L+ + V H L++I+ L+
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV----------KCQKLT 152
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+ D
Sbjct: 153 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM- 208
Query: 229 RLHSTRVLGTFGYHAPE 245
T + T Y APE
Sbjct: 209 ----TGYVATRWYRAPE 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 28/196 (14%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQP--DQEFLAQVSMVSRLKNE 121
+ +F SL+GEG+YG V + +G AIKK++ +P L ++ ++ K+E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 122 NVVELVGYYVDGPLR----VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
N++ + V + + LH ++ + VK+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--------R 229
G+ +IHR++K SN+L+ + K+ DF L+ ++AA +
Sbjct: 130 GS-------------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 230 LHSTRVLGTFGYHAPE 245
T + T Y APE
Sbjct: 177 SGMTEYVATRWYRAPE 192
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYXQRTLREIKILLRFRHENIIG-- 89
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 90 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 139
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 241 YHAPE 245
Y +PE
Sbjct: 197 YVSPE 201
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 83
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 84 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 138
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ V L + R AIK L+ + + V+ ++SRL +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 139
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 241 YHAPE 245
Y +PE
Sbjct: 197 YVSPE 201
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 83
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 84 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 138
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 34 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 90
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 91 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 145
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 87
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 88 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 143
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 144 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 31/215 (14%)
Query: 36 KEAPAKEMKTVTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY-FGVLRSGRAAA 94
K AP KE+ V V P + +G+G + + Y + + A
Sbjct: 24 KSAPLKEIPDVLVDP------------RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 95 IKKLDSSK--QPDQE--FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHD 150
K + S +P Q+ ++++ L N +VV G++ D + E + SL +
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
Query: 151 ILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD 210
LH + R I +G++YLH R+IHR++K N+ L DD
Sbjct: 132 -LHKRRKAVTEPEA---RYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNLFLNDDM 179
Query: 211 IAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
KI DF L+ + R + GT Y APE
Sbjct: 180 DVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPE 212
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 35 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 91
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 92 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 146
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 147 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 26 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 82
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 83 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 137
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 138 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 89
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 90 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 85
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 86 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 85
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 86 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 18 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 71
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 129
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 130 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH 176
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 177 TDDEMTGYVATR-----WYRAPE 194
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 89
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 90 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH--LSNDHICYFLYQILRGLKYI 144
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 35 VKEAPAKEMKTVTVQPIAV-PVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRA 92
VK PA +V + +A+ S D + D + IG G+YG V R +G+
Sbjct: 23 VKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQ 82
Query: 93 AAIKKLDSS---KQPDQEFLAQVSMVSRLKNENVVEL-------VGYYVDGPLR-VLAYE 141
AIKK+ ++ + L ++ ++ K++N++ + V Y G + V
Sbjct: 83 VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY---GEFKSVYVVL 139
Query: 142 HASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKS 201
+ LH I+H L+ RGL+Y+H ++IHR++K
Sbjct: 140 DLMESDLHQIIHSSQP---------LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKP 187
Query: 202 SNVLLFDDDIAKISDFDLSNQAPDAAA--RLHSTRVLGTFGYHAPE 245
SN+L+ ++ KI DF ++ + A + T + T Y APE
Sbjct: 188 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+ L +E S L D + Q ++
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQ------- 117
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 172
Query: 242 HAPE 245
APE
Sbjct: 173 RAPE 176
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 93
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 94 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 149
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 150 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 85
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 86 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 22 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 75
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 133
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 134 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH 180
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 181 TDDEMTGYVATR-----WYRAPE 198
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 26/180 (14%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSS--KQPDQEFLAQVSMVSRLKNEN---VVELV 127
+G G+ G+V+ R +G A+K++ S K+ ++ L + +V LK+ + +V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCF 90
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV--KIAVGAARGLEY 185
G ++ +A E G+ + L +R+ K+ V + L Y
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKLKKRMQGPI---------PERILGKMTVAIVKALYY 139
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
L EK +IHR++K SN+LL + K+ DF +S + D A+ R G Y APE
Sbjct: 140 LKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPE 194
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ R ++EN++
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 105
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 106 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 161
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 162 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 27 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 80
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 81 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 138
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 139 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH 185
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 186 TDDEMTGYVATR-----WYRAPE 203
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+ L +E S L D + Q ++
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQ------- 116
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T Y
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 171
Query: 242 HAPE 245
APE
Sbjct: 172 RAPE 175
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
KIAV + LE+LH K +IHR++K SNVL+ K+ DF +S D+ A+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK---T 211
Query: 234 RVLGTFGYHAPE 245
G Y APE
Sbjct: 212 IDAGCKPYMAPE 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 12 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 65
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 123
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 124 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 171 TDDEMTGYVATR-----WYRAPE 188
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 12 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 65
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHV 123
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 124 QF----------LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 171 TDDEMTGYVATR-----WYRAPE 188
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 89 SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSL 148
S A +++L + + + L +VS + N+++L Y L ++ KG L
Sbjct: 44 SFSAEEVQELREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGEL 98
Query: 149 HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD 208
D L LS + KI + LH+ I+HR++K N+LL D
Sbjct: 99 FDYL---------TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDD 146
Query: 209 DDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
D K++DF S Q D +L V GT Y APE
Sbjct: 147 DMNIKLTDFGFSCQL-DPGEKLRE--VCGTPSYLAPE 180
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 36 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 89
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 90 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIV---------- 137
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
L+ + RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 195 TDDEMTGYVATR-----WYRAPE 212
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 35 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 88
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 89 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIV---------- 136
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
L+ + RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 194 TDDEM-----TGYVATRWYRAPE 211
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 21 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 74
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 132
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 133 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 180 TDDEMTGYVATR-----WYRAPE 197
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 22 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 75
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIV---------- 123
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
L+ + RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 181 TDDEM-----TGYVATRWYRAPE 198
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 175 TDDEM-----TGYVATRWYRAPE 192
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 113
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 114 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 163
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 164 DENYYKAQTHGKWPVKWYAPE 184
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 129
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 130 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 179
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 180 DENYYKAQTHGKWPVKWYAPE 200
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 129
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 130 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 179
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 180 DENYYKAQTHGKWPVKWYAPE 200
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 35 VKEAPAKEMKTVTVQPIAV-PVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRA 92
VK PA +V + +A+ S D + D + IG G+YG V R +G+
Sbjct: 22 VKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQ 81
Query: 93 AAIKKLDSS---KQPDQEFLAQVSMVSRLKNENVVEL-------VGYYVDGPLR-VLAYE 141
AIKK+ ++ + L ++ ++ K++N++ + V Y G + V
Sbjct: 82 VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY---GEFKSVYVVL 138
Query: 142 HASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKS 201
+ LH I+H L+ RGL+Y+H ++IHR++K
Sbjct: 139 DLMESDLHQIIHSSQP---------LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKP 186
Query: 202 SNVLLFDDDIAKISDFDLSNQAPDAAA--RLHSTRVLGTFGYHAPE 245
SN+L+ ++ KI DF ++ + A + T + T Y APE
Sbjct: 187 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 28 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SKPFQSIIHAKRTY 81
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 82 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 139
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 140 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 187 TDDEMTGYVATR-----WYRAPE 204
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 89 SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSL 148
S A +++L + + + L +VS + N+++L Y L ++ KG L
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 149 HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD 208
D L LS + KI + LH+ I+HR++K N+LL D
Sbjct: 112 FDYL---------TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDD 159
Query: 209 DDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
D K++DF S Q D +L V GT Y APE
Sbjct: 160 DMNIKLTDFGFSCQL-DPGEKLRE--VCGTPSYLAPE 193
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 23 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 76
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 134
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 135 QF----------LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 182 TADEM-----TGYVATRWYRAPE 199
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 119
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 120 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 169
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 170 DENYYKAQTHGKWPVKWYAPE 190
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 36 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 89
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 90 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIV---------- 137
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
L+ + RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 195 TDDEMXGXVATR-----WYRAPE 212
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 47 TVQPIAVPVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQP 104
+++ IA+ V E EK D F ++G+GS+G+V+ SG A ++L + K
Sbjct: 4 SIKEIAI-THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDA--RQLYAMKVL 60
Query: 105 DQEFLAQVSMV-SRLKNENVVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXX--XXXX 160
+ L V ++++ + +VE V+ P V L Y ++G L+ IL
Sbjct: 61 KKATLKVRDRVRTKMERDILVE-----VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 115
Query: 161 XXXXXXLSWAQRVKIAVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
+ + VK + A L++LH II+R++K N+LL ++ K++DF L
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL 172
Query: 220 SNQAPDAAARLHSTRVLGTFGYHAPE 245
S ++ D + +S GT Y APE
Sbjct: 173 SKESIDHEKKAYS--FCGTVEYMAPE 196
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 14 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 67
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 68 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 125
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 126 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 172
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 173 TDDEMTGYVATR-----WYRAPE 190
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 23 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 76
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 134
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 135 QF----------LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 182 TADEMTGYVATR-----WYRAPE 199
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 27 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 80
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 81 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 138
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 139 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 185
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 186 TDDEMTGYVATR-----WYRAPE 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 127
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 128 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 177
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 178 DENYYKAQTHGKWPVKWYAPE 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 18 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 71
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 129
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 130 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 177 TDDEMTGYVATR-----WYRAPE 194
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 12 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 65
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 123
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 124 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 171 TDDEMTGYVATR-----WYRAPE 188
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 21/184 (11%)
Query: 67 NFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQ-PDQEFLAQVSMVSRLKNENVV 124
F ++G G++ V+ R +G+ A+K + S D +++++ ++K+EN+V
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L Y L + S G L D + + Q+V AV +
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI---QQVLSAV------K 120
Query: 185 YLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
YLHE I+HR++K N+L ++ I+DF LS + + GT GY
Sbjct: 121 YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----STACGTPGY 173
Query: 242 HAPE 245
APE
Sbjct: 174 VAPE 177
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 28 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 81
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 82 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 139
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 140 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 187 TDDEMTGYVATR-----WYRAPE 204
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 28 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 81
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 82 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 139
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 140 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 187 TDDEMTGYVATR-----WYRAPE 204
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 39 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 92
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 93 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 150
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 151 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 198 TDDEMTGYVATR-----WYRAPE 215
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 472
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 473 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 522
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 523 DENYYKAQTHGKWPVKWYAPE 543
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 47 TVQPIAVPVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQP 104
+++ IA+ V E EK D F ++G+GS+G+V+ SG A ++L + K
Sbjct: 4 SIKEIAI-THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDA--RQLYAMKVL 60
Query: 105 DQEFLAQVSMV-SRLKNENVVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXX--XXXX 160
+ L V ++++ + +VE V+ P V L Y ++G L+ IL
Sbjct: 61 KKATLKVRDRVRTKMERDILVE-----VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 115
Query: 161 XXXXXXLSWAQRVKIAVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
+ + VK + A L++LH II+R++K N+LL ++ K++DF L
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL 172
Query: 220 SNQAPDAAARLHSTRVLGTFGYHAPE 245
S ++ D + +S GT Y APE
Sbjct: 173 SKESIDHEKKAYS--FCGTVEYMAPE 196
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 113
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 114 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 163
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 164 DENXYKAQTHGKWPVKWYAPE 184
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 23 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 76
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 134
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 135 QF----------LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 182 TADEMTGYVATR-----WYRAPE 199
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 107
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 108 ------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 157
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 158 DENYYKAQTHGKWPVKWYAPE 178
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 18 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 71
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 129
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 130 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 177 TDDEMTGYVATR-----WYRAPE 194
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 36 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 89
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 90 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 147
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 148 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 195 TDDEMTGYVATR-----WYRAPE 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 109
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 110 ------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 159
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 160 DENYYKAQTHGKWPVKWYAPE 180
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 13 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 66
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 67 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 124
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 125 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 172 TDDEMTGYVATR-----WYRAPE 189
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N +G G+YG V ++G A+KKL +P Q +
Sbjct: 26 TIWEVPERYQNLAP---VGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 79
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 80 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 137
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 138 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 184
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 185 TDDEM-----TGYVATRWYRAPE 202
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGHRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 175 TDDEM-----TGYVATRWYRAPE 192
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 27/181 (14%)
Query: 74 IGEGSYGRV---YFGVLRSGRAAAIKKLDSSKQPDQEFL------AQVSMVSRLKNENVV 124
+G G+YG V Y LR + A+KKL +P Q + ++ ++ LK+ENV+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKL---SRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L+ + + E S+ L L LS + RGL+
Sbjct: 91 GLLDVFTPAT----SIEDFSEVYLVTTL-MGADLNNIVKSQALSDEHVQFLVYQLLRGLK 145
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
Y+H IIHR++K SNV + +D +I DF L+ QA + T + T Y AP
Sbjct: 146 YIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-----TGYVATRWYRAP 197
Query: 245 E 245
E
Sbjct: 198 E 198
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 175 TDDEM-----TGXVATRWYRAPE 192
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 107 EFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX 166
E LA+ +++ +L N +V ++G + +L E A G L+ L
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--- 471
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 226
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A
Sbjct: 472 ------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRA 521
Query: 227 AARLHSTRVLGTF--GYHAPE 245
+ + G + ++APE
Sbjct: 522 DENYYKAQTHGKWPVKWYAPE 542
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 13 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 66
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 67 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 124
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 125 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 172 TDDEMTGYVATR-----WYRAPE 189
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 47 TVQPIAVPVISVDELKEKTD--NFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQP 104
+++ IA+ V E EK D F ++G+GS+G+V+ SG A ++L + K
Sbjct: 5 SIKEIAI-THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDA--RQLYAMKVL 61
Query: 105 DQEFLAQVSMV-SRLKNENVVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXX--XXXX 160
+ L V ++++ + +VE V+ P V L Y ++G L+ IL
Sbjct: 62 KKATLKVRDRVRTKMERDILVE-----VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 116
Query: 161 XXXXXXLSWAQRVKIAVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL 219
+ + VK + A L++LH II+R++K N+LL ++ K++DF L
Sbjct: 117 RLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL 173
Query: 220 SNQAPDAAARLHSTRVLGTFGYHAPE 245
S ++ D + +S GT Y APE
Sbjct: 174 SKESIDHEKKAYS--FCGTVEYMAPE 197
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 35 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 88
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 89 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 146
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 147 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 194 TDDEMTGYVATR-----WYRAPE 211
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 23 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 76
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 134
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 135 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 182 TDDEMTGYVATR-----WYRAPE 199
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 21 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 74
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 132
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 133 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 180 TDDEMTGYVATR-----WYRAPE 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 15 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 68
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 69 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 126
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 127 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 173
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 174 TDDEMTGYVATR-----WYRAPE 191
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 72 SLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVV 124
S +G+G++G V +G A+K+L S PDQ+ F ++ ++ L ++ +V
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIV 71
Query: 125 EL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+ V Y P L E+ G L D L L ++ + + +G
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR--------LDASRLLLYSSQICKG 123
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
+EYL + R +HR++ + N+L+ + KI+DF L+ P
Sbjct: 124 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A I+K+ + Q L ++ ++ R ++EN++
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVA-IRKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 89
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 90 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 21 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 74
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 132
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 133 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 180 TDDEMTGYVATR-----WYRAPE 197
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIV---------- 117
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
L+ + RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 74 IGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVGY 129
IGEG+YG V + +R R A IKK+ + Q L ++ ++ R ++ENV+ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVA-IKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 130 YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEK 189
L + + + + L+ + ++ RGL+Y+H
Sbjct: 110 LRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQI------LRGLKYIHSA 163
Query: 190 AEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+L+ KI DF L+ A P+ T + T Y APE
Sbjct: 164 ---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRAAAIK------KLDSSKQPDQEFLAQVSMVSRLKNENVV 124
N ++GEG +G VY GV + + I K D + ++F+++ ++ L + ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L+G + P ++ E G L L L V ++ + +
Sbjct: 77 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNS--------LKVLTLVLYSLQICKAMA 127
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
YL +HR+I N+L+ + K+ DF LS D
Sbjct: 128 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 17/185 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVS----MVSRLKN 120
++F ++GEGS+ L + R AIK L+ + + V+ ++SRL +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
V+L + D +A G L + R A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRFYTA-EIV 140
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 241 YHAPE 245
Y +PE
Sbjct: 198 YVSPE 202
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSS--KQPDQEFLAQVSMVSRLKNE 121
++F + +IG G +G VY G + +G+ A+K LD K E LA NE
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLAL--------NE 239
Query: 122 NVVELVGYYVDGPLRV-LAYEHASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAV 177
++ + D P V ++Y + L D+++ S A A
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 299
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHST 233
GLE++H + +++R++K +N+LL + +ISD D S + P A+
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS------ 350
Query: 234 RVLGTFGYHAPE 245
+GT GY APE
Sbjct: 351 --VGTHGYMAPE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSS--KQPDQEFLAQVSMVSRLKNE 121
++F + +IG G +G VY G + +G+ A+K LD K E LA NE
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLAL--------NE 239
Query: 122 NVVELVGYYVDGPLRV-LAYEHASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAV 177
++ + D P V ++Y + L D+++ S A A
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 299
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHST 233
GLE++H + +++R++K +N+LL + +ISD D S + P A+
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS------ 350
Query: 234 RVLGTFGYHAPE 245
+GT GY APE
Sbjct: 351 --VGTHGYMAPE 360
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 27/181 (14%)
Query: 74 IGEGSYGRV---YFGVLRSGRAAAIKKLDSSKQPDQEFL------AQVSMVSRLKNENVV 124
+G G+YG V Y LR + A+KKL +P Q + ++ ++ LK+ENV+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKL---SRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L+ + + E S+ L L LS + RGL+
Sbjct: 91 GLLDVFTPAT----SIEDFSEVYLVTTL-MGADLNNIVKCQALSDEHVQFLVYQLLRGLK 145
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
Y+H IIHR++K SNV + +D +I DF L+ QA + T + T Y AP
Sbjct: 146 YIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-----TGYVATRWYRAP 197
Query: 245 E 245
E
Sbjct: 198 E 198
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSS--KQPDQEFLAQVSMVSRLKNE 121
++F + +IG G +G VY G + +G+ A+K LD K E LA NE
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLAL--------NE 239
Query: 122 NVVELVGYYVDGPLRV-LAYEHASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAV 177
++ + D P V ++Y + L D+++ S A A
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 299
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHST 233
GLE++H + +++R++K +N+LL + +ISD D S + P A+
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS------ 350
Query: 234 RVLGTFGYHAPE 245
+GT GY APE
Sbjct: 351 --VGTHGYMAPE 360
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR--SGRAAAIKKLDSS--KQPDQEFLAQVSMVSRLKNE 121
++F + +IG G +G VY G + +G+ A+K LD K E LA NE
Sbjct: 188 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLAL--------NE 238
Query: 122 NVVELVGYYVDGPLRV-LAYEHASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAV 177
++ + D P V ++Y + L D+++ S A A
Sbjct: 239 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 298
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHST 233
GLE++H + +++R++K +N+LL + +ISD D S + P A+
Sbjct: 299 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS------ 349
Query: 234 RVLGTFGYHAPE 245
+GT GY APE
Sbjct: 350 --VGTHGYMAPE 359
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 22 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 75
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 133
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 134 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 181 TDDEMTGYVATR-----WYRAPE 198
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 18 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 71
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 129
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 130 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 177 TDDEMTGYVATR-----WYRAPE 194
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRAAAIK------KLDSSKQPDQEFLAQVSMVSRLKNENVV 124
N ++GEG +G VY GV + + I K D + ++F+++ ++ L + ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L+G + P ++ E G L L L V ++ + +
Sbjct: 89 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNS--------LKVLTLVLYSLQICKAMA 139
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
YL +HR+I N+L+ + K+ DF LS D
Sbjct: 140 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 177
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRAAAIK------KLDSSKQPDQEFLAQVSMVSRLKNENVV 124
N ++GEG +G VY GV + + I K D + ++F+++ ++ L + ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L+G + P ++ E G L L L V ++ + +
Sbjct: 73 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNS--------LKVLTLVLYSLQICKAMA 123
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
YL +HR+I N+L+ + K+ DF LS D
Sbjct: 124 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 161
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQP--DQEFLAQVSMVSRLKNE 121
+ +F SL+GEG+YG V + +G AIKK++ +P L ++ ++ K+E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 122 NVVELVGYYVDGPLR----VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
N++ + V + + LH ++ + VK+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 228
G+ +IHR++K SN+L+ + K+ DF L+ ++AA
Sbjct: 130 GS-------------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 22 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 75
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIV---------- 123
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
L+ + RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 181 TDDEM-----TGYVATRWYRAPE 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRL 118
E +NF IGEG+YG VY + +G A+KK+ + + + ++S++ L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+ N+V+L+ L +E + D+ L + ++
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLL-- 120
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 121 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 173
Query: 239 FGYHAPE 245
Y APE
Sbjct: 174 LWYRAPE 180
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 12/175 (6%)
Query: 74 IGEGSYGRVYFGVLRS-GRAAAIK--KLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYY 130
+G G+Y VY G+ ++ G A+K KLDS + + ++S++ LK+EN+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
L +E +D+ L +GL + HE
Sbjct: 73 HTENKLTLVFEFMD----NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN- 127
Query: 191 EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+I+HR++K N+L+ K+ DF L+ +A S+ V+ T Y AP+
Sbjct: 128 --KILHRDLKPQNLLINKRGQLKLGDFGLA-RAFGIPVNTFSSEVV-TLWYRAPD 178
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 39 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 92
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 93 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 150
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI DF L+
Sbjct: 151 QF----------LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 198 TDDEMXGYVATR-----WYRAPE 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
N+ +GEGS+G+V +G+ A+K ++ ++ LA+ M R++ E
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIERE---- 64
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSW----AQRVKIAVGAAR 181
+ Y LR+L + H K L+D++ QR K++ AR
Sbjct: 65 -ISY-----LRLLRHPHIIK--LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 116
Query: 182 --------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
+EY H +I+HR++K N+LL + KI+DF LSN D S
Sbjct: 117 RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 173
Query: 234 RVLGTFGYHAPE 245
G+ Y APE
Sbjct: 174 ---GSPNYAAPE 182
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIK---KLDSSKQPDQE-FLAQVSMVSRLK 119
+D + ++G+GS+G V + +G+ A+K K ++ D+E L +V ++ +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ N+ +L ++ D L E + G L D + S +I
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAARIIRQV 135
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
G+ Y H+ +I+HR++K N+LL D +I DF LS A++ ++
Sbjct: 136 LSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKXKDKI- 189
Query: 237 GTFGYHAPE 245
GT Y APE
Sbjct: 190 GTAYYIAPE 198
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
N+ +GEGS+G+V +G+ A+K ++ ++ LA+ M R++ E
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIERE---- 58
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSW----AQRVKIAVGAAR 181
+ Y LR+L + H K L+D++ QR K++ AR
Sbjct: 59 -ISY-----LRLLRHPHIIK--LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 110
Query: 182 --------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
+EY H +I+HR++K N+LL + KI+DF LSN D S
Sbjct: 111 RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 167
Query: 234 RVLGTFGYHAPE 245
G+ Y APE
Sbjct: 168 ---GSPNYAAPE 176
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 60 ELKEKTDNFGTNSLIGEGSYGRVY-FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
E +E+ +G GS+G V+ ++G A+KK+ +E +A + L
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA----CAGL 107
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+ +V L G +GP + E GSL ++ L
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG---------Q 158
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDD-DIAKISDFD--LSNQAPDAAAR--LHST 233
A GLEYLH + RI+H ++K+ NVLL D A + DF L Q PD + L
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 214
Query: 234 RVLGTFGYHAPE 245
+ GT + APE
Sbjct: 215 YIPGTETHMAPE 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
N+ +GEGS+G+V +G+ A+K ++ ++ LA+ M R++ E
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIERE---- 63
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSW----AQRVKIAVGAAR 181
+ Y LR+L + H K L+D++ QR K++ AR
Sbjct: 64 -ISY-----LRLLRHPHIIK--LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 115
Query: 182 --------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
+EY H +I+HR++K N+LL + KI+DF LSN D S
Sbjct: 116 RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172
Query: 234 RVLGTFGYHAPE 245
G+ Y APE
Sbjct: 173 ---GSPNYAAPE 181
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
N+ +GEGS+G+V +G+ A+K ++ ++ LA+ M R++ E
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIERE---- 54
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSW----AQRVKIAVGAAR 181
+ Y LR+L + H K L+D++ QR K++ AR
Sbjct: 55 -ISY-----LRLLRHPHIIK--LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 106
Query: 182 --------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
+EY H +I+HR++K N+LL + KI+DF LSN D S
Sbjct: 107 RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 163
Query: 234 RVLGTFGYHAPE 245
G+ Y APE
Sbjct: 164 ---GSPNYAAPE 172
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+ L +E + L D + Q ++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQ------- 114
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T Y
Sbjct: 115 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 169
Query: 242 HAPE 245
APE
Sbjct: 170 RAPE 173
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 72 SLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVV 124
S +G+G++G V +G A+K+L S PDQ+ F ++ ++ L ++ +V
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIV 75
Query: 125 ELVGYYVDGPLRV---LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
+ G GP R L E+ G L D L L ++ + + +
Sbjct: 76 KYRGVSY-GPGRQSLRLVMEYLPSGCLRDFLQRHRAR--------LDASRLLLYSSQICK 126
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
G+EYL + R +HR++ + N+L+ + KI+DF L+ P
Sbjct: 127 GMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 21/189 (11%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRL 118
E +NF IGEG+YG VY + +G A+KK+ + + + ++S++ L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 119 KNENVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 176
+ N+V+L V + + V + H D Q
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----- 121
Query: 177 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+
Sbjct: 122 -----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV 172
Query: 237 GTFGYHAPE 245
T Y APE
Sbjct: 173 -TLWYRAPE 180
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 60 ELKEKTDNFGTNSLIGEGSYGRVY-FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
E +E+ +G GS+G V+ ++G A+KK+ +E +A + L
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA----CAGL 123
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+ +V L G +GP + E GSL ++ L
Sbjct: 124 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG---------Q 174
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDD-DIAKISDFD--LSNQAPDAAAR--LHST 233
A GLEYLH + RI+H ++K+ NVLL D A + DF L Q PD + L
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 230
Query: 234 RVLGTFGYHAPE 245
+ GT + APE
Sbjct: 231 YIPGTETHMAPE 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 67 NFGTNSL-IGEGSYGRVY-FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
++ T+ L +G GS+G V+ ++G A+KK+ +E +A + S +V
Sbjct: 74 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS----PRIV 129
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L G +GP + E GSL ++ L A GLE
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG---------QALEGLE 180
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDD-DIAKISDFDLS-NQAPDAAAR--LHSTRVLGTFG 240
YLH + RI+H ++K+ NVLL D A + DF + PD + L + GT
Sbjct: 181 YLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 241 YHAPE 245
+ APE
Sbjct: 238 HMAPE 242
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 74 IGEGSYGRVYF---GVLRSGRAAAI-KKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGY 129
+G G+YG V V RA I +K S + + L +V+++ L + N+++L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 130 YVDGPLRVLAYEHASKGSLHD-ILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 188
+ D L E G L D I+H + I G+ YLH+
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMK----------FNEVDAAVIIKQVLSGVTYLHK 154
Query: 189 KAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
I+HR++K N+LL D + KI DF LS A + R LGT Y APE
Sbjct: 155 H---NIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMKER-LGTAYYIAPE 208
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 90 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 139
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 140 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 94 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 143
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXX---XXXXXXXXLSWAQ 171
+ + NVV L+G GPL V+ E G+L L L+
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 146 LICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 93 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 142
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 143 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 67 NFGTNSL-IGEGSYGRVY-FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
++ T+ L +G GS+G V+ ++G A+KK+ +E +A + S +V
Sbjct: 93 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS----PRIV 148
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L G +GP + E GSL ++ L A GLE
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG---------QALEGLE 199
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDD-DIAKISDFDLS-NQAPDAAAR--LHSTRVLGTFG 240
YLH + RI+H ++K+ NVLL D A + DF + PD + L + GT
Sbjct: 200 YLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 241 YHAPE 245
+ APE
Sbjct: 257 HMAPE 261
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKL--DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG +G+V +G A+K L +S + ++ ++ L +EN+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 127 VGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
G + G L E GSL + L ++ Q++K AV +G++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--------PKNKNKINLKQQLKYAVQICKGMD 140
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
YL + + +HR++ + NVL+ + KI DF L+
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXX---XXXXXXXXLSWAQ 171
+ + NVV L+G GPL V+ E G+L L L+
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 146 LIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 72 SLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVV 124
S +G+G++G V +G A+K+L S PDQ+ F ++ ++ L ++ +V
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIV 87
Query: 125 ELVGYYVDGPLRV---LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
+ G GP R L E+ G L D L L ++ + + +
Sbjct: 88 KYRGVSY-GPGRQSLRLVMEYLPSGCLRDFLQRHRAR--------LDASRLLLYSSQICK 138
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
G+EYL + R +HR++ + N+L+ + KI+DF L+ P
Sbjct: 139 GMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 87 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 136
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 137 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 95 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 144
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 113 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 162
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 163 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 95 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 144
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 94 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 143
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 92 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 141
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 142 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 72 SLIGEGSYGRVYFGVL-----RSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNENVV 124
S +G+G++G V +G A+K+L S PDQ+ F ++ ++ L ++ +V
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIV 74
Query: 125 ELVGYYVDGPLRV---LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
+ G GP R L E+ G L D L L ++ + + +
Sbjct: 75 KYRGVSY-GPGRQSLRLVMEYLPSGCLRDFLQRHRAR--------LDASRLLLYSSQICK 125
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
G+EYL + R +HR++ + N+L+ + KI+DF L+ P
Sbjct: 126 GMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 27/181 (14%)
Query: 74 IGEGSYGRV---YFGVLRSGRAAAIKKLDSSKQPDQEFL------AQVSMVSRLKNENVV 124
+G G+YG V Y LR + A+KKL +P Q + ++ ++ LK+ENV+
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKL---SRPFQSLIHARRTYRELRLLKHLKHENVI 82
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L+ + + E S+ L L LS + RGL+
Sbjct: 83 GLLDVFTPAT----SIEDFSEVYLVTTL-MGADLNNIVKCQALSDEHVQFLVYQLLRGLK 137
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
Y+H IIHR++K SNV + +D +I DF L+ QA + T + T Y AP
Sbjct: 138 YIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADE-----EMTGYVATRWYRAP 189
Query: 245 E 245
E
Sbjct: 190 E 190
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 114 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 163
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G++YL A + +HR++ + N +L + K++DF L+ D
Sbjct: 164 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 115 --GLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 60 ELKEKTDNFGTNSLIGEGSYGRVY-FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRL 118
E +E+ +G GS+G V+ ++G A+KK+ +E +A + L
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA----CAGL 121
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+ +V L G +GP + E GSL ++ L
Sbjct: 122 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG---------Q 172
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDD-DIAKISDFD--LSNQAPDAAAR--LHST 233
A GLEYLH + RI+H ++K+ NVLL D A + DF L Q PD + L
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 228
Query: 234 RVLGTFGYHAPE 245
+ GT + APE
Sbjct: 229 YIPGTETHMAPE 240
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 46 VTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLD 99
V + P +P E +FG +G G++G+V +G+++S A A+K L
Sbjct: 21 VXIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 78
Query: 100 SSKQPDQE--FLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILH--- 153
S + ++++ ++S L N N+V L+G G ++ E+ G L + L
Sbjct: 79 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 138
Query: 154 ------XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF 207
L + + A+G+ +L K IHR++ + N+LL
Sbjct: 139 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 195
Query: 208 DDDIAKISDFDLS 220
I KI DF L+
Sbjct: 196 HGRITKICDFGLA 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 46 VTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLD 99
V + P +P E +FG +G G++G+V +G+++S A A+K L
Sbjct: 5 VYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62
Query: 100 SSKQPDQE--FLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILH--- 153
S + ++++ ++S L N N+V L+G G ++ E+ G L + L
Sbjct: 63 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122
Query: 154 ------XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF 207
L + + A+G+ +L K IHR++ + N+LL
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 179
Query: 208 DDDIAKISDFDLS 220
I KI DF L+
Sbjct: 180 HGRITKICDFGLA 192
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 242 HAPE 245
APE
Sbjct: 356 MAPE 359
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 242 HAPE 245
APE
Sbjct: 356 MAPE 359
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 74 IGEGSYGRVYFGVL-----RSGRAAAIKKL--DSSKQPDQEFLAQVSMVSRLKNENVVEL 126
+GEG +G+V +G A+K L +S + ++ ++ L +EN+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 127 VGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
G + G L E GSL + L ++ Q++K AV +G++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--------PKNKNKINLKQQLKYAVQICKGMD 128
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
YL + + +HR++ + NVL+ + KI DF L+
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 161
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXX------XXXXXXXXXXLS 168
+ + NVV L+G GPL V+ E G+L L L+
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 169 WAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 242 HAPE 245
APE
Sbjct: 356 MAPE 359
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 242 HAPE 245
APE
Sbjct: 356 MAPE 359
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 17/184 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+ L +E S D+ L + ++ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM----DLKKFMDASALTGIPLPLIKSYLFQLL----Q 117
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 172
Query: 242 HAPE 245
APE
Sbjct: 173 RAPE 176
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ ++EN++
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG--- 87
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 88 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 143
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 144 SA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 40/219 (18%)
Query: 35 VKEAPAKEMKT----VTVQPIAVPVISVDELKEKT-----------DNFGTNSLIGEGSY 79
VK A E+KT + + P +P+ DE E+ D +G G++
Sbjct: 21 VKRANGGELKTGYLSIVMDPDELPL---DEHCERLPYDASKWEFPRDRLKLGKPLGRGAF 77
Query: 80 GRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNE-NVVELVGYY 130
G+V FG+ ++ R A+K L ++ + ++++ ++ + + NVV L+G
Sbjct: 78 GQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 137
Query: 131 VD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XLSWAQRVKIAVGAAR 181
GPL V+ E G+L L L+ + + A+
Sbjct: 138 TKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 196
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 197 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 89
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 90 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 72 SLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELV 127
S IGEG+YG V + L R A IKK+ + Q L ++ ++ R ++EN++
Sbjct: 34 SYIGEGAYGMVCSAYDNLNKVRVA-IKKISPFEHQTYCQRTLREIKILLRFRHENIIG-- 90
Query: 128 GYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
++ +R E + D++ LS RGL+Y+
Sbjct: 91 ---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 145
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K SN+LL KI DF L+ A PD + T Y APE
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 28/196 (14%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLK 119
KE + +IG G V V R +G A+K ++ ++++ E L +V +R +
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRE 149
Query: 120 NE---------NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+++ L+ Y L ++ KG L D L LS
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---------TEKVALSEK 200
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS-NQAPDAAAR 229
+ I + +LH I+HR++K N+LL D+ ++SDF S + P R
Sbjct: 201 ETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR 257
Query: 230 LHSTRVLGTFGYHAPE 245
+ GT GY APE
Sbjct: 258 ----ELCGTPGYLAPE 269
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 115
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 116 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 168
Query: 240 GYHAPE 245
Y APE
Sbjct: 169 WYRAPE 174
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 17/184 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+V+L+ L +E S D+ L + ++ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM----DLKKFMDASALTGIPLPLIKSYLFQLL----Q 115
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 170
Query: 242 HAPE 245
APE
Sbjct: 171 RAPE 174
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H + D Q
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQ-------- 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 118 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 170
Query: 240 GYHAPE 245
Y APE
Sbjct: 171 WYRAPE 176
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 23/195 (11%)
Query: 46 VTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLD 99
V + P +P E +FG +G G++G+V +G+++S A A+K L
Sbjct: 28 VYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 100 SSKQPDQE--FLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILH--- 153
S + ++++ ++S L N N+V L+G G ++ E+ G L + L
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 154 ------XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF 207
L + + A+G+ +L K IHR++ + N+LL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 202
Query: 208 DDDIAKISDFDLSNQ 222
I KI DF L+
Sbjct: 203 HGRITKICDFGLARH 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 70 TNSLIGEGSYGRVYFGVL----RSGRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENV 123
++ +IG+G +G VY G ++ AIK L + Q + FL + ++ L + NV
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 124 VELVGYYV--DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
+ L+G + +G VL + G D+L L + + AR
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHG---DLLQFIRSPQRNPTVKDL-----ISFGLQVAR 135
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+EYL AE + +HR++ + N +L + K++DF L+ D
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 25/194 (12%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLR-----SGRAAAIKKLDSSK-----QPDQEFLAQ 111
K + + F ++G+G YG+V F V + +G+ A+K L + + A+
Sbjct: 13 KIRPECFELLRVLGKGGYGKV-FQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 112 VSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
+++ +K+ +V+L+ + G L E+ S G L L L+
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA--- 128
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+ +A+G +LH+K II+R++K N++L K++DF L ++ H
Sbjct: 129 EISMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 232 STRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 180 T--FCGTIEYMAPE 191
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 229
A+ V A GLE LH + RI++R++K N+LL D +ISD L+ P+
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 341
Query: 230 LHSTRVLGTFGYHAPE 245
RV GT GY APE
Sbjct: 342 -IKGRV-GTVGYMAPE 355
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 46 VTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLD 99
V + P +P E +FG +G G++G+V +G+++S A A+K L
Sbjct: 28 VYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 100 SSKQPDQE--FLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILH--- 153
S + ++++ ++S L N N+V L+G G ++ E+ G L + L
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 154 ------XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF 207
L + + A+G+ +L K IHR++ + N+LL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 202
Query: 208 DDDIAKISDFDLS 220
I KI DF L+
Sbjct: 203 HGRITKICDFGLA 215
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 113
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 166
Query: 240 GYHAPE 245
Y APE
Sbjct: 167 WYRAPE 172
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 113
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 166
Query: 240 GYHAPE 245
Y APE
Sbjct: 167 WYRAPE 172
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 118
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 119 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 171
Query: 240 GYHAPE 245
Y APE
Sbjct: 172 WYRAPE 177
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 229
A+ V A GLE LH + RI++R++K N+LL D +ISD L+ P+
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 341
Query: 230 LHSTRVLGTFGYHAPE 245
RV GT GY APE
Sbjct: 342 -IKGRV-GTVGYMAPE 355
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI D+ L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 74 IGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYV-D 132
+G G +G V G + A+K + + EF + + +L + +V+ G +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 133 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 192
P+ ++ E+ S G L + L L +Q +++ G+ +L
Sbjct: 76 YPIYIVT-EYISNGCLLNYLR--------SHGKGLEPSQLLEMCYDVCEGMAFLESH--- 123
Query: 193 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
+ IHR++ + N L+ D K+SDF ++ D
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 73 LIGEGSYGRVYFGV-------LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++G G++G VY G+ ++ A + + ++S + ++E L + +++ + + V
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L+G + ++ L + G L D H L+W ++ A+G+ Y
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLD--HVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
L + R++HR++ + NVL+ + KI+DF L+
Sbjct: 135 LEDV---RLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+E +VS++ ++ + NV+ L Y + VL E S G L D L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKE 110
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSN 221
LS + G+ YLH K +I H ++K N++L D +I K+ DF L++
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 222 QAPDAAARLHSTRVLGTFGYHAPE 245
+ D + + GT + APE
Sbjct: 168 EIEDG---VEFKNIFGTPEFVAPE 188
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXX-----XXXXXXXLSW 169
+ + NVV L+G GPL V+ E G+L L L+
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 170 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 148 EHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 46 VTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVY----FGVLRSGRA--AAIKKLD 99
V + P +P E +FG +G G++G+V +G+++S A A+K L
Sbjct: 23 VYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 80
Query: 100 SSKQPDQE--FLAQVSMVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILH--- 153
S + ++++ ++S L N N+V L+G G ++ E+ G L + L
Sbjct: 81 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 140
Query: 154 ------XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF 207
L + + A+G+ +L K IHR++ + N+LL
Sbjct: 141 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 197
Query: 208 DDDIAKISDFDLS 220
I KI DF L+
Sbjct: 198 HGRITKICDFGLA 210
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIT-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 73 LIGEGSYGRVYFGV-LRSGRA----AAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVE 125
++G G +G V+ GV + G + IK ++ S +Q Q + + L + ++V
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L+G L+ L ++ GSL D H L+W ++ A+G+ Y
Sbjct: 80 LLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQI------AKGMYY 130
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L E ++HRN+ + NVLL +++DF +++ P
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSS--KQPDQEFLAQ--VSMVSRLKNENVVELVG 128
+GEGS+G+V ++ + A+K + K+ D + +S + L++ ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 188
V+ E+A G L D + + Q++ A+ EY H
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYI---VEKKRMTEDEGRRFFQQIICAI------EYCHR 126
Query: 189 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+I+HR++K N+LL D+ KI+DF LSN D S G+ Y APE
Sbjct: 127 H---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 73 LIGEGSYGRVYFGV-LRSGRA----AAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVE 125
++G G +G V+ GV + G + IK ++ S +Q Q + + L + ++V
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 126 LVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEY 185
L+G L+ L ++ GSL D H L+W ++ A+G+ Y
Sbjct: 98 LLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQI------AKGMYY 148
Query: 186 LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 224
L E ++HRN+ + NVLL +++DF +++ P
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 184
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIT-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 96 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 145
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+++L A + +HR++ + N +L + K++DF L+ D
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+E +VS++ ++ + NV+ L Y + VL E S G L D L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKE 110
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSN 221
LS + G+ YLH K +I H ++K N++L D +I K+ DF L++
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 222 QAPDAAARLHSTRVLGTFGYHAPE 245
+ D + + GT + APE
Sbjct: 168 EIEDG---VEFKNIFGTPEFVAPE 188
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 95 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 144
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+++L A + +HR++ + N +L + K++DF L+ D
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 17/186 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKL--DSSKQPDQEFLAQVSMVSRLKNEN 122
D F +G G++G V+ RS G IK + D S+ P ++ A++ ++ L + N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
++++ + D + E G L + + LS ++
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERI-----VSAQARGKALSEGYVAELMKQMMNA 136
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDI---AKISDFDLSNQAPDAAARLHSTRVLGTF 239
L Y H + ++H+++K N+L D KI DF L A + HST GT
Sbjct: 137 LAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL---AELFKSDEHSTNAAGTA 190
Query: 240 GYHAPE 245
Y APE
Sbjct: 191 LYMAPE 196
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIT-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 100 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 149
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+++L A + +HR++ + N +L + K++DF L+ D
Sbjct: 150 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+E +VS++ ++ + NV+ L Y + VL E S G L D L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKE 110
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSN 221
LS + G+ YLH K +I H ++K N++L D +I K+ DF L++
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 222 QAPDAAARLHSTRVLGTFGYHAPE 245
+ D + + GT + APE
Sbjct: 168 EIEDG---VEFKNIFGTPEFVAPE 188
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 72 SLIGEGSYGRVYFGVLRSGRA-AAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVELVG 128
S IGEG+YG V + AIKK+ + Q L ++ ++ ++EN++
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG--- 87
Query: 129 YYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ +R E + D++ LS RGL+Y+H
Sbjct: 88 --INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 143
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGYHAPE 245
++HR++K SN+LL KI DF L+ A PD T + T Y APE
Sbjct: 144 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+E +VS++ ++ + NV+ L Y + VL E S G L D L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKE 110
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSN 221
LS + G+ YLH K +I H ++K N++L D +I K+ DF L++
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 222 QAPDAAARLHSTRVLGTFGYHAPE 245
+ D + + GT + APE
Sbjct: 168 EIEDG---VEFKNIFGTPEFVAPE 188
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 96 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 145
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+++L A + +HR++ + N +L + K++DF L+ D
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 118 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 170
Query: 240 GYHAPE 245
Y APE
Sbjct: 171 WYRAPE 176
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 154 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 203
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+++L A + +HR++ + N +L + K++DF L+ D
Sbjct: 204 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 148 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 197
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 117
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 118 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 170
Query: 240 GYHAPE 245
Y APE
Sbjct: 171 WYRAPE 176
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 116
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 169
Query: 240 GYHAPE 245
Y APE
Sbjct: 170 WYRAPE 175
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 118
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 119 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 171
Query: 240 GYHAPE 245
Y APE
Sbjct: 172 WYRAPE 177
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 116
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 169
Query: 240 GYHAPE 245
Y APE
Sbjct: 170 WYRAPE 175
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 66 DNFGTNSLIGEGSYGRVY----FGVLRSG--RAAAIKKLD--SSKQPDQEFLAQVSMVSR 117
D +G G++G+V FG+ ++ R A+K L ++ + ++++ ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 118 LKNE-NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XL 167
+ + NVV L+G GPL V+ E G+L L L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 168 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+E +VS++ ++ + NV+ L Y + VL E S G L D L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKE 110
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSN 221
LS + G+ YLH K +I H ++K N++L D +I K+ DF L++
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 222 QAPDAAARLHSTRVLGTFGYHAPE 245
+ D + + GT + APE
Sbjct: 168 EIEDG---VEFKNIFGTPEFVAPE 188
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 93 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 142
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+++L A + +HR++ + N +L + K++DF L+ D
Sbjct: 143 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 113
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 114 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 166
Query: 240 GYHAPE 245
Y APE
Sbjct: 167 WYRAPE 172
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 71 NSLIGEGSYGRVYFGVLRSGRA----AAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
N +IG G +G VY G L A+K L+ + +FL + ++ + NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 125 ELVGYYV---DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
L+G + PL VL Y G L + + + + A+
Sbjct: 95 SLLGICLRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTV--------KDLIGFGLQVAK 144
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPD 225
G+++L A + +HR++ + N +L + K++DF L+ D
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 115
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 116 --GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 168
Query: 240 GYHAPE 245
Y APE
Sbjct: 169 WYRAPE 174
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 116
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 --GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 169
Query: 240 GYHAPE 245
Y APE
Sbjct: 170 WYRAPE 175
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 115
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 116 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 168
Query: 240 GYHAPE 245
Y APE
Sbjct: 169 WYRAPE 174
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 115
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 116 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 168
Query: 240 GYHAPE 245
Y APE
Sbjct: 169 WYRAPE 174
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 113
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 114 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 166
Query: 240 GYHAPE 245
Y APE
Sbjct: 167 WYRAPE 172
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 73 LIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQ-PDQEFLAQVSMVSRLKNE-NVVELVGY 129
++ EG + VY + SGR A+K+L S+++ ++ + +V + +L N+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 130 YV-------DGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
G L KG L + L LS +KI R
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFL------KKMESRGPLSCDTVLKIFYQTCRA 148
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 217
++++H + +P IIHR++K N+LL + K+ DF
Sbjct: 149 VQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKL---DSSKQPDQEFLAQVSMVSRLKN 120
K NF T + E G ++ G + G +K L D S + ++F + + +
Sbjct: 10 KQLNFLTK--LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 121 ENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
NV+ ++G P L GSL+++LH +Q VK A+
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ-------SQAVKFALD 119
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKIS--DFDLSNQAP 224
ARG+ +LH EP I + S +V++ +D A+IS D S Q+P
Sbjct: 120 MARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLR-----SGRAAAIKKLDSSK-----QPDQEFLAQ 111
K + + F ++G+G YG+V F V + +G+ A+K L + + A+
Sbjct: 13 KIRPECFELLRVLGKGGYGKV-FQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 112 VSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
+++ +K+ +V+L+ + G L E+ S G L L L+
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA--- 128
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
+ +A+G +LH+K II+R++K N++L K++DF L ++ H
Sbjct: 129 EISMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 232 STRVLGTFGYHAPE 245
GT Y APE
Sbjct: 180 X--FCGTIEYMAPE 191
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
KIAV + LE+LH K +IHR++K SNVL+ K+ DF +S D A+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 234 RVLGTFGYHAPE 245
G Y APE
Sbjct: 171 ---GCKPYMAPE 179
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
Query: 74 IGEGSYGRV-YFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNE-NVVELVGYYV 131
+GEG + V L G A+K++ +Q D+E + + + RL N N++ LV Y
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC- 95
Query: 132 DGPLRVLAYEHAS--------KGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
LR +H + +G+L + + + W + +G RGL
Sbjct: 96 ---LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGL 147
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA 223
E +H K HR++K +N+LL D+ + D NQA
Sbjct: 148 EAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+KK+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV- 124
+NF ++G G+YG+V+ SG D+ K + L + ++V + K
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGH-------DTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 125 ---ELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR-----VKI 175
+++ + P V L Y ++ LH IL LS +R V+I
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLIL---DYINGGELFTHLSQRERFTEHEVQI 163
Query: 176 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHST 233
VG LE+LH+ II+R+IK N+LL + ++DF LS + D R +
Sbjct: 164 YVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD- 219
Query: 234 RVLGTFGYHAPE 245
GT Y AP+
Sbjct: 220 -FCGTIEYMAPD 230
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+E +VS++ ++ + N++ L Y + VL E S G L D L
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---------AQKE 110
Query: 166 XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSN 221
LS + G+ YLH K +I H ++K N++L D +I K+ DF L++
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 222 QAPDAAARLHSTRVLGTFGYHAPE 245
+ D + + GT + APE
Sbjct: 168 EIEDG---VEFKNIFGTPEFVAPE 188
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI F L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLRS--------GRAAAIKKLDSS-KQPDQEFLAQV 112
K + ++ N +G+G++ +++ GV R +K LD + + + F
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 113 SMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
SM+S+L ++++V G V G +L E GSL L + W +
Sbjct: 64 SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL------KKNKNCINILW--K 115
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD 210
+++A A + +L E +IH N+ + N+LL ++
Sbjct: 116 LEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREE 150
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGY 129
+G G+YG V + RSG AIKKL Q + + ++ ++ +++ENV+ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 130 YVDGPLRVLAYEHASKGSLHD---ILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
+ +S + +D ++ S + + +GL+Y+
Sbjct: 110 FTPA---------SSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYI 160
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K N+ + +D KI DF L+ A DA T + T Y APE
Sbjct: 161 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEM----TGYVVTRWYRAPE 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++ H+ RI+HR+IK N+L+ + KI DF ++ +A + + VLGT Y
Sbjct: 123 GIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTNHVLGTVQY 178
Query: 242 HAPE 245
+PE
Sbjct: 179 FSPE 182
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 67 NFGTNSLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
+F +++G+G++G+V L S R AIKK+ +++ L++V +++ L ++ VV
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 125 ELVGYYVD-----GPLR--------VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
+++ P+ + E+ G+L+D++H W
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY----W-- 119
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ L Y+H + IIHR++K N+ + + KI DF L+
Sbjct: 120 --RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+ K+ + + + ++S++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 115 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 240 GYHAPE 245
Y APE
Sbjct: 168 WYRAPE 173
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
+NF IGEG+YG VY + +G A+ K+ + + + ++S++ L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 122 NVVEL--VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V+L V + + V + H D Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ-------- 113
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 --GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 166
Query: 240 GYHAPE 245
Y APE
Sbjct: 167 WYRAPE 172
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGY 129
+G G+YG V + RSG AIKKL Q + + ++ ++ +++ENV+ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 130 YVDGPLRVLAYEHASKGSLHD---ILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYL 186
+ +S + +D ++ S + + +GL+Y+
Sbjct: 92 FTPA---------SSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 187 HEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
H ++HR++K N+ + +D KI DF L+ A DA T + T Y APE
Sbjct: 143 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEM----TGYVVTRWYRAPE 193
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 60 ELKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKL--DSSKQPDQEFLAQVSMVS 116
++K K ++F + ++G+GS+G+V+ + + + AIK L D D + +MV
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMVE 68
Query: 117 R------LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+ ++ + + + E+ + G D+++ +A
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGG---DLMYHIQSCHKFDLSRATFYA 125
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ + GL++LH K I++R++K N+LL D KI+DF + + A+
Sbjct: 126 AEIIL------GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 175
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 176 -TNEFCGTPDYIAPE 189
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI D L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI D L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D T + T Y APE
Sbjct: 175 TDDEM-----TGYVATRWYRAPE 192
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ---------- 222
+ I + A +E+LH K ++HR++K SN+ DD+ K+ DF L
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 223 -APDAAARLHSTRVLGTFGYHAPE 245
P A H +V GT Y +PE
Sbjct: 224 LTPMPAYATHXGQV-GTKLYMSPE 246
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 233
KIAV + LE+LH K +IHR++K SNVL+ K DF +S D A+
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 234 RVLGTFGYHAPE 245
G Y APE
Sbjct: 198 ---GCKPYXAPE 206
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 20/187 (10%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLA----QVSMVSRL 118
K ++ +G G++G+V G +G A+K L+ K + + ++ +
Sbjct: 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF 73
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
++ ++++L + E+ S G L D + L + ++
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI---------CKNGRLDEKESRRLFQQ 124
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
G++Y H ++HR++K NVLL AKI+DF LSN D S G+
Sbjct: 125 ILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GS 178
Query: 239 FGYHAPE 245
Y APE
Sbjct: 179 PNYAAPE 185
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
++S+ L +++VV G++ D + E + SL + LH L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--------LTEP 117
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ G +YLH R+IHR++K N+ L +D KI DF L+ + R
Sbjct: 118 EARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER- 173
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 174 -KKTLCGTPNYIAPE 187
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
++S+ L +++VV G++ D + E + SL + LH L+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--------LTEP 121
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ G +YLH R+IHR++K N+ L +D KI DF L+ + R
Sbjct: 122 EARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER- 177
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 178 -KKTLCGTPNYIAPE 191
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ---------- 222
+ I + A +E+LH K ++HR++K SN+ DD+ K+ DF L
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 223 -APDAAARLHSTRVLGTFGYHAPE 245
P A H+ +V GT Y +PE
Sbjct: 178 LTPMPAYARHTGQV-GTKLYMSPE 200
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFL------ 109
++ E+ E+ N S +G G+YG V ++G A+KKL +P Q +
Sbjct: 16 TIWEVPERYQNL---SPVGSGAYGSVCAAFDTKTGLRVAVKKL---SRPFQSIIHAKRTY 69
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLR-------VLAYEHASKGSLHDILHXXXXXXXXX 162
++ ++ +K+ENV+ L+ + P R V H L++I+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 127
Query: 163 XXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 222
+ RGL+Y+H IIHR++K SN+ + +D KI D L+
Sbjct: 128 QF----------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARH 174
Query: 223 APDAAARLHSTRVLGTFGYHAPE 245
D +TR Y APE
Sbjct: 175 TDDEMTGYVATR-----WYRAPE 192
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 23/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQE----FLAQVSMVSRLK 119
+D + +G G+YG V + +G AIK + S L +V+++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ N+++L ++ D L E G L D + S I
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI---------ILRQKFSEVDAAVIMKQV 130
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHSTRVL 236
G YLH+ I+HR++K N+LL D + KI DF LS + ++ L
Sbjct: 131 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--L 184
Query: 237 GTFGYHAPE 245
GT Y APE
Sbjct: 185 GTAYYIAPE 193
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
++S+ L +++VV G++ D + E + SL + LH L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--------LTEP 117
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ G +YLH R+IHR++K N+ L +D KI DF L+ + R
Sbjct: 118 EARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER- 173
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 174 -KKTLCGTPNYIAPE 187
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 61 LKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSS----KQPDQEFLAQVSMVS 116
L+ K +++ +IG G++G V ++ + KL S K+ D F + +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 117 RLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 175
N VV+L + D + E+ G L +++ WA+
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--------KWAKFYTA 181
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
V A L+ +H +IHR++K N+LL K++DF + D +H
Sbjct: 182 EVVLA--LDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM-DETGMVHCDTA 235
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 236 VGTPDYISPE 245
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+D + IG GSY V + + A+K +D SK+ E ++ ++ R ++ N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYGQHPN 82
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHD-ILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
++ L Y DG L E G L D IL A V +G +
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSERE--------ASFVLHTIG--K 132
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQ 222
+EYLH + ++HR++K SN+L D+ + +I DF + Q
Sbjct: 133 TVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ 174
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRSGRAA-AIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
+D + IG GSY V ++ A+K +D SK+ E ++ ++ R ++ N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYGQHPN 82
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHD-ILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
++ L Y DG L E G L D IL A V +G +
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSERE--------ASFVLHTIG--K 132
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQ 222
+EYLH + ++HR++K SN+L D+ + +I DF + Q
Sbjct: 133 TVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ 174
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 60 ELKEKTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKL--DSSKQPDQEFLAQVSMVS 116
++K K ++F + ++G+GS+G+V+ + + + AIK L D D + +MV
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMVE 67
Query: 117 R------LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+ ++ + + + E+ + G D+++ +A
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGG---DLMYHIQSCHKFDLSRATFYA 124
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ + GL++LH K I++R++K N+LL D KI+DF + + A+
Sbjct: 125 AEIIL------GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 174
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 175 -TNXFCGTPDYIAPE 188
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKL---DSSKQPDQEFLAQVSMVSRLKN 120
K NF T + E G ++ G + G +K L D S + ++F + + +
Sbjct: 10 KQLNFLTK--LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 121 ENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
NV+ ++G P L GSL+++LH +Q VK A+
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ-------SQAVKFALD 119
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKIS--DFDLSNQAP 224
ARG +LH EP I + S +V + +D A+IS D S Q+P
Sbjct: 120 XARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP 166
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
++S+ L +++VV G++ D + E + SL + LH L+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--------LTEP 141
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ G +YLH R+IHR++K N+ L +D KI DF L+ + R
Sbjct: 142 EARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER- 197
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 198 -KKVLCGTPNYIAPE 211
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 39/187 (20%)
Query: 74 IGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNENVVELVGY 129
+G G+YG V V R+G AIKKL Q + + ++ ++ +++ENV+ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 130 YV-DGPLR-------VLAYEHASKGSL--HDILHXXXXXXXXXXXXXLSWAQRVKIAV-G 178
+ D L V+ + G L H+ L R++ V
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE----------------DRIQFLVYQ 136
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
+GL Y+H IIHR++K N+ + +D KI DF L+ QA TR
Sbjct: 137 MLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR---- 189
Query: 239 FGYHAPE 245
Y APE
Sbjct: 190 -WYRAPE 195
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
++S+ L +++VV G++ D + E + SL + LH L+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--------LTEP 139
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ G +YLH R+IHR++K N+ L +D KI DF L+ + R
Sbjct: 140 EARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER- 195
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 196 -KKVLCGTPNYIAPE 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNEN 122
D + ++G G++ V R+ + AIK + +E +++++ ++K+ N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V L Y G L + S G L D + A R+ V A
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRLIFQVLDA-- 128
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
++YLH+ I+HR++K N+L + +D ISDF LS + D + L + GT
Sbjct: 129 VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTA--CGTP 182
Query: 240 GYHAPE 245
GY APE
Sbjct: 183 GYVAPE 188
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAAR 229
+ + ARG+E+L + + IHR++ + N+LL ++++ KI DF L+ + PD R
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD-YVR 257
Query: 230 LHSTRVLGTFGYHAPE 245
TR+ + APE
Sbjct: 258 KGDTRL--PLKWMAPE 271
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
++S+ L +++VV G++ D + E + SL + LH L+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--------LTEP 115
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
+ G +YLH R+IHR++K N+ L +D KI DF L+ + R
Sbjct: 116 EARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER- 171
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 172 -KKVLCGTPNYIAPE 185
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 27/169 (15%)
Query: 67 NFGTNSLIGEGSYGRVY--FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
+F +++G+G++G+V L S R AIKK+ +++ L++V +++ L ++ VV
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 125 ELVGYYVD-------------GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
+++ + E+ +L+D++H W
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY----W-- 119
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ L Y+H + IIHRN+K N+ + + KI DF L+
Sbjct: 120 --RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLRS--------GRAAAIKKLDSS-KQPDQEFLAQV 112
K + ++ N +G+G++ +++ GV R +K LD + + + F
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 113 SMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
SM+S+L ++++V G G +L E GSL L + W +
Sbjct: 64 SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL------KKNKNCINILW--K 115
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD 210
+++A A + +L E +IH N+ + N+LL ++
Sbjct: 116 LEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREE 150
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNEN 122
D + ++G G++ V R+ + AIK + +E +++++ ++K+ N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V L Y G L + S G L D + A R+ V A
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRLIFQVLDA-- 128
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
++YLH+ I+HR++K N+L + +D ISDF LS + D + L + GT
Sbjct: 129 VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTA--CGTP 182
Query: 240 GYHAPE 245
GY APE
Sbjct: 183 GYVAPE 188
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNEN 122
D + ++G G++ V R+ + AIK + +E +++++ ++K+ N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V L Y G L + S G L D + A R+ V A
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRLIFQVLDA-- 128
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
++YLH+ I+HR++K N+L + +D ISDF LS + D + L + GT
Sbjct: 129 VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTA--CGTP 182
Query: 240 GYHAPE 245
GY APE
Sbjct: 183 GYVAPE 188
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQE--FLAQVSMVSRLKNEN 122
D + ++G G++ V R+ + AIK + +E +++++ ++K+ N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
+V L Y G L + S G L D + A R+ V A
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRLIFQVLDA-- 128
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
++YLH+ I+HR++K N+L + +D ISDF LS + D + L + GT
Sbjct: 129 VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTA--CGTP 182
Query: 240 GYHAPE 245
GY APE
Sbjct: 183 GYVAPE 188
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSM----VSRL 118
K ++ +G G++G+V G + +G A+K L+ K + + ++ +
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
++ ++++L + E+ S G L D + A+R+ +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-------ARRLFQQIL 121
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
+A ++Y H ++HR++K NVLL AKI+DF LSN D S G+
Sbjct: 122 SA--VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GS 173
Query: 239 FGYHAPE 245
Y APE
Sbjct: 174 PNYAAPE 180
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSM----VSRL 118
K ++ +G G++G+V G + +G A+K L+ K + + ++ +
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
++ ++++L + E+ S G L D + A+R+ +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-------ARRLFQQIL 121
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
+A ++Y H ++HR++K NVLL AKI+DF LSN D S G+
Sbjct: 122 SA--VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GS 173
Query: 239 FGYHAPE 245
Y APE
Sbjct: 174 PNYAAPE 180
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRSGRAA-AIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
TD + IG GSY + ++ A+K +D SK+ E ++ ++ R ++ N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE---EIEILLRYGQHPN 77
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
++ L Y DG + E G L D + S + + +
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKI---------LRQKFFSEREASAVLFTITKT 128
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQ 222
+EYLH + ++HR++K SN+L D+ + +I DF + Q
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 23/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQE----FLAQVSMVSRLK 119
+D + +G G+YG V + +G AIK + S L +V+++ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 120 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ N+++L ++ D L E G L D + S I
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI---------ILRQKFSEVDAAVIMKQV 113
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHSTRVL 236
G YLH+ I+HR++K N+LL D + KI DF LS + ++ L
Sbjct: 114 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--L 167
Query: 237 GTFGYHAPE 245
GT Y APE
Sbjct: 168 GTAYYIAPE 176
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRSGRAA-AIKKLDSSKQPDQEFLAQVSMVSRL-KNEN 122
TD + IG GSY + ++ A+K +D SK+ E ++ ++ R ++ N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE---EIEILLRYGQHPN 77
Query: 123 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARG 182
++ L Y DG + E G L D + S + + +
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKI---------LRQKFFSEREASAVLFTITKT 128
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQ 222
+EYLH + ++HR++K SN+L D+ + +I DF + Q
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 24/187 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
D+F IG+GS+G+V ++K D+ K +++ + V R + NV +
Sbjct: 15 DHFEILRAIGKGSFGKV----------CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 126 LVGYY--VDGPLRV-LAYEHASKGSLH---DILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ ++ P V L Y + + D+L + VK+ +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK-EETVKLFICE 123
Query: 180 -ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
L+YL + RIIHR++K N+LL + I+DF+++ P T + GT
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QITTMAGT 177
Query: 239 FGYHAPE 245
Y APE
Sbjct: 178 KPYMAPE 184
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLD---SSKQPDQEFLAQVSMVSRLK 119
+ +++ IG GSYGR +S G+ K+LD ++ Q +++V+++ LK
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 120 NENVVELVGYYVDGPLRVL--AYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
+ N+V +D L E+ G L ++ L +++
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMT 118
Query: 178 GAARGLEYLHEKAE--PRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHS 232
L+ H +++ ++HR++K +NV L K+ DF L+ N D A
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-- 176
Query: 233 TRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 177 ---VGTPYYMSPE 186
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 74 IGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLK-NENVVELVG 128
+G+G+YG V+ + R+G A+KK+ + Q Q ++ +++ L +EN+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 129 YY-VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
D V + LH ++ L + + + ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANI----------LEPVHKQYVVYQLIKVIKYLH 126
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++HR++K SN+LL + K++DF LS
Sbjct: 127 SGG---LLHRDMKPSNILLNAECHVKVADFGLS 156
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 35/191 (18%)
Query: 74 IGEGSYGRVYFGVLRSGRA-AAIK-----KLDSSKQPD---------QEFLAQVSMVSRL 118
+G G+YG V ++G + AIK + D + D +E ++S++ L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+ N+++L + D L E G L + + I
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---------INRHKFDECDAANIMKQ 154
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI---AKISDFDLSN-QAPDAAARLHSTR 234
G+ YLH+ I+HR+IK N+LL + + KI DF LS+ + D R
Sbjct: 155 ILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR--- 208
Query: 235 VLGTFGYHAPE 245
LGT Y APE
Sbjct: 209 -LGTAYYIAPE 218
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 24/184 (13%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVEL---- 126
+G G +G V + + +G AIK+ P + + ++ ++ +L + NVV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 127 --VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+ L +LA E+ G L L+ + + + L
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALR 135
Query: 185 YLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
YLHE RIIHR++K N++L I KI D + + T +GT Y
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQY 189
Query: 242 HAPE 245
APE
Sbjct: 190 LAPE 193
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 24/184 (13%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPD--QEFLAQVSMVSRLKNENVVEL---- 126
+G G +G V + + +G AIK+ P + + ++ ++ +L + NVV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 127 --VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+ L +LA E+ G L L+ + + + L
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALR 136
Query: 185 YLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
YLHE RIIHR++K N++L I KI D + + T +GT Y
Sbjct: 137 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQY 190
Query: 242 HAPE 245
APE
Sbjct: 191 LAPE 194
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 96 KKLDSSKQ--PDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH 153
++L SS++ +E +V+++ +++ N++ L + + VL E S G L D L
Sbjct: 41 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL- 99
Query: 154 XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-- 211
L+ + + G+ YLH K RI H ++K N++L D ++
Sbjct: 100 --------AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 148
Query: 212 --AKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
K+ DF ++++ +A + + GT + APE
Sbjct: 149 PRIKLIDFGIAHKI-EAGNEFKN--IFGTPEFVAPE 181
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 96 KKLDSSKQ--PDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH 153
++L SS++ +E +V+++ +++ N++ L + + VL E S G L D L
Sbjct: 48 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL- 106
Query: 154 XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-- 211
L+ + + G+ YLH K RI H ++K N++L D ++
Sbjct: 107 --------AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 155
Query: 212 --AKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
K+ DF ++++ +A + + GT + APE
Sbjct: 156 PRIKLIDFGIAHKI-EAGNEFKN--IFGTPEFVAPE 188
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 25/168 (14%)
Query: 67 NFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
+F +++G+G++G+V R AIKK+ +++ L++V +++ L ++ VV
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 126 LVGYYVD-----GPLR--------VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+++ P+ + E+ +L+D++H W
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY----W--- 119
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
++ L Y+H + IIHR++K N+ + + KI DF L+
Sbjct: 120 -RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 96 KKLDSSKQ--PDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH 153
++L SS++ +E +V+++ +++ N++ L + + VL E S G L D L
Sbjct: 62 RRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL- 120
Query: 154 XXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-- 211
L+ + + G+ YLH K RI H ++K N++L D ++
Sbjct: 121 --------AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 169
Query: 212 --AKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
K+ DF ++++ +A + + GT + APE
Sbjct: 170 PRIKLIDFGIAHKI-EAGNEFKN--IFGTPEFVAPE 202
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 28/191 (14%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPD---QEFLAQVSMVSRLKNE 121
D + + +GEG+YG VY + + AIK++ + + + +VS++ L++
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV--KIAVGA 179
N++EL V+ + H LH I + RV
Sbjct: 94 NIIELKS--------VIHHNH----RLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-----IAKISDFDLSNQAPDAAARLHSTR 234
G+ + H + R +HR++K N+LL D + KI DF L+ +A R +
Sbjct: 142 INGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA-RAFGIPIRQFTHE 197
Query: 235 VLGTFGYHAPE 245
++ T Y PE
Sbjct: 198 II-TLWYRPPE 207
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 174
Query: 242 HAPE 245
PE
Sbjct: 175 MPPE 178
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 32/205 (15%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPD------------ 105
+ EL + I GSYG V GV G AIK++ ++
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+ L ++ +++ + N++ L +V H + ++H +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFV----------HFEEPAMHKL--YLVTELMRTDLA 121
Query: 166 XLSWAQRVKIAVGAARGLEY-----LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ QR+ I+ + Y LH E ++HR++ N+LL D++ I DF+L+
Sbjct: 122 QVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Query: 221 NQAPDAAARLHSTRVLGTFGYHAPE 245
+ A + H + Y APE
Sbjct: 182 REDTADANKTH---YVTHRWYRAPE 203
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 178
Query: 242 HAPE 245
PE
Sbjct: 179 MPPE 182
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 32/205 (15%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPD------------ 105
+ EL + I GSYG V GV G AIK++ ++
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 106 QEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX 165
+ L ++ +++ + N++ L +V H + ++H +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFV----------HFEEPAMHKL--YLVTELMRTDLA 121
Query: 166 XLSWAQRVKIAVGAARGLEY-----LHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
+ QR+ I+ + Y LH E ++HR++ N+LL D++ I DF+L+
Sbjct: 122 QVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Query: 221 NQAPDAAARLHSTRVLGTFGYHAPE 245
+ A + H + Y APE
Sbjct: 182 REDTADANKTH---YVTHRWYRAPE 203
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 20/186 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFG-VLRSGRAAAIKKL--DSSKQPD--QEFLAQVSMVSRLKN 120
DNF ++G+GS+G+V V +G A+K L D Q D + + + ++S +N
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 121 ENVVELVGYYVDGPLRVL-AYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
+ + P R+ E + G L + H A+ +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIIS----- 135
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
L +LH+K II+R++K NVLL + K++DF + + + + GT
Sbjct: 136 --ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG--ICNGVTTATFCGTP 188
Query: 240 GYHAPE 245
Y APE
Sbjct: 189 DYIAPE 194
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 194
Query: 242 HAPE 245
PE
Sbjct: 195 MPPE 198
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 175
Query: 242 HAPE 245
PE
Sbjct: 176 MPPE 179
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 30/191 (15%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLD--SSKQPDQE-FLAQVSMVSRLKNE 121
+ + ++G+GS+G V R + + A+K ++ S+K D L +V ++ +L +
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+++L D + E + G L D + S +I
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEI---------IKRKRFSEHDAARIIKQVFS 132
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLL----FDDDIAKISDFDLSN---QAPDAAARLHSTR 234
G+ Y+H+ I+HR++K N+LL D DI KI DF LS Q R
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDR----- 183
Query: 235 VLGTFGYHAPE 245
+GT Y APE
Sbjct: 184 -IGTAYYIAPE 193
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 242 HAPE 245
PE
Sbjct: 223 MPPE 226
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 73 LIGEGSYGRVYFGVLRSG----RAAAIKKLDSSKQ-PDQE--FLAQVSMVSRLKNENVVE 125
L+GEGSYG+V VL S RA I K ++ P+ E ++ ++ RL+++NV++
Sbjct: 12 LLGEGSYGKVK-EVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 126 LVG--YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
LV Y + + E+ G + ++L + Q + GL
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLID-------GL 122
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHA 243
EYLH + I+H++IK N+LL KIS ++ AA G+ +
Sbjct: 123 EYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 244 PE 245
PE
Sbjct: 180 PE 181
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 242 HAPE 245
PE
Sbjct: 223 MPPE 226
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 30/191 (15%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLD--SSKQPDQE-FLAQVSMVSRLKNE 121
+ + ++G+GS+G V R + + A+K ++ S+K D L +V ++ +L +
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 181
N+++L D + E + G L D + S +I
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEI---------IKRKRFSEHDAARIIKQVFS 132
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLL----FDDDIAKISDFDLSN---QAPDAAARLHSTR 234
G+ Y+H+ I+HR++K N+LL D DI KI DF LS Q R
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDR----- 183
Query: 235 VLGTFGYHAPE 245
+GT Y APE
Sbjct: 184 -IGTAYYIAPE 193
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 43/188 (22%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIK--KLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYY 130
+GEG+Y VY G + + A+K +L+ + + +VS++ LK+ N+V
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV------ 63
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ------------RVKIAV- 177
+LHDI+H Q VK+ +
Sbjct: 64 ----------------TLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLF 107
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 237
RGL Y H + +++HR++K N+L+ + K++DF L+ +A + + V+
Sbjct: 108 QLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVV- 162
Query: 238 TFGYHAPE 245
T Y P+
Sbjct: 163 TLWYRPPD 170
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 63 EKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLA---------QV 112
E + + T S +G G++G V+ V + + +K + K + ++ ++
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 113 SMVSRLKNENVVELVGYYVD-GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 171
+++SR+++ N+++++ + + G +++ +H S L + +
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF---R 137
Query: 172 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 231
++ AVG YL K IIHR+IK N+++ +D K+ DF +AA L
Sbjct: 138 QLVSAVG------YLRLK---DIIHRDIKDENIVIAEDFTIKLIDF-------GSAAYLE 181
Query: 232 STRVL----GTFGYHAPE 245
++ GT Y APE
Sbjct: 182 RGKLFYTFCGTIEYCAPE 199
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 15/190 (7%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLD---SSKQPDQEFLAQVSMVSRLK 119
+ +++ IG GSYGR +S G+ K+LD ++ Q +++V+++ LK
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 120 NENVVELVGYYVDGPLRVL--AYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
+ N+V +D L E+ G L ++ L +++
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMT 118
Query: 178 GAARGLEYLHEKAE--PRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
L+ H +++ ++HR++K +NV L K+ DF L+ + +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKTF 176
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 177 VGTPYYMSPE 186
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 73 LIGEGSYGRVYFGVLR-SGRAAAIKKLD--SSKQPDQE-FLAQVSMVSRLKNENVVELVG 128
++G+GS+G V R + + A+K ++ S+K D L +V ++ +L + N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 129 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 188
D + E + G L D + S +I G+ Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI---------IKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 189 KAEPRIIHRNIKSSNVLL----FDDDIAKISDFDLSN---QAPDAAARLHSTRVLGTFGY 241
I+HR++K N+LL D DI KI DF LS Q R +GT Y
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDR------IGTAYY 189
Query: 242 HAPE 245
APE
Sbjct: 190 IAPE 193
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 184
Query: 242 HAPE 245
APE
Sbjct: 185 RAPE 188
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A+ T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTASTNFMMTPYVVTRYY 189
Query: 242 HAPE 245
APE
Sbjct: 190 RAPE 193
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTACTNFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 15/190 (7%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLD---SSKQPDQEFLAQVSMVSRLK 119
+ +++ IG GSYGR +S G+ K+LD ++ Q +++V+++ LK
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 120 NENVVELVGYYVDGPLRVL--AYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
+ N+V +D L E+ G L ++ L +++
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMT 118
Query: 178 GAARGLEYLHEKAE--PRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
L+ H +++ ++HR++K +NV L K+ DF L+ + +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKAF 176
Query: 236 LGTFGYHAPE 245
+GT Y +PE
Sbjct: 177 VGTPYYMSPE 186
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
L+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 167 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 221
L+ + + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 229
Query: 242 HAPE 245
APE
Sbjct: 230 RAPE 233
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 68 FGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKL--DSSKQPDQEFLAQVSMVSRLKNENVV 124
F +G G++ V + +G+ A+K + + K + +++++ ++K+EN+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L Y L + S G L D + + ++V AV
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI---RQVLDAV------Y 134
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAK---ISDFDLSNQAPDAAARLHSTRVLGTFGY 241
YLH I+HR++K N+L + D ISDF LS + + ST GT GY
Sbjct: 135 YLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMST-ACGTPGY 188
Query: 242 HAPE 245
APE
Sbjct: 189 VAPE 192
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 192
Query: 242 HAPE 245
APE
Sbjct: 193 RAPE 196
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 196
Query: 242 HAPE 245
APE
Sbjct: 197 RAPE 200
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 229
Query: 242 HAPE 245
APE
Sbjct: 230 RAPE 233
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 192
Query: 242 HAPE 245
APE
Sbjct: 193 RAPE 196
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 192
Query: 242 HAPE 245
APE
Sbjct: 193 RAPE 196
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 190
Query: 242 HAPE 245
APE
Sbjct: 191 RAPE 194
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 185
Query: 242 HAPE 245
APE
Sbjct: 186 RAPE 189
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 184
Query: 242 HAPE 245
APE
Sbjct: 185 RAPE 188
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 185
Query: 242 HAPE 245
APE
Sbjct: 186 RAPE 189
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 185
Query: 242 HAPE 245
APE
Sbjct: 186 RAPE 189
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 19/193 (9%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSS----KQPDQEFLAQVS 113
+ +L+ K +++ +IG G++G V +S R KL S K+ D F +
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 114 MVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+ N VV+L + D + E+ G L +++ WA+
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--------KWARF 172
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
V A L+ +H IHR++K N+LL K++DF + + +
Sbjct: 173 YTAEVVLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRC 226
Query: 233 TRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 227 DTAVGTPDYISPE 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 19/193 (9%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSS----KQPDQEFLAQVS 113
+ +L+ K +++ +IG G++G V +S R KL S K+ D F +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 114 MVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+ N VV+L + D + E+ G L +++ WA+
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--------KWARF 177
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
V A L+ +H IHR++K N+LL K++DF + + +
Sbjct: 178 YTAEVVLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRC 231
Query: 233 TRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 232 DTAVGTPDYISPE 244
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 179
Query: 239 FGYHAPE 245
Y APE
Sbjct: 180 PTYLAPE 186
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQV-GTVNY 194
Query: 242 HAPE 245
PE
Sbjct: 195 MPPE 198
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 179
Query: 239 FGYHAPE 245
Y APE
Sbjct: 180 PTYLAPE 186
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 179
Query: 239 FGYHAPE 245
Y APE
Sbjct: 180 PTYLAPE 186
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 19/193 (9%)
Query: 58 VDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSS----KQPDQEFLAQVS 113
+ +L+ K +++ +IG G++G V +S R KL S K+ D F +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 114 MVSRLKNE-NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 172
+ N VV+L + D + E+ G L +++ WA+
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--------KWARF 177
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
V A L+ +H IHR++K N+LL K++DF + + +
Sbjct: 178 YTAEVVLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRC 231
Query: 233 TRVLGTFGYHAPE 245
+GT Y +PE
Sbjct: 232 DTAVGTPDYISPE 244
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 178
Query: 239 FGYHAPE 245
Y APE
Sbjct: 179 PTYLAPE 185
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 185
Query: 239 FGYHAPE 245
Y APE
Sbjct: 186 PTYLAPE 192
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK------QPDQEFLAQVSMVSRL 118
D + +IG+G++ V + R +G+ A+K +D +K ++ + S+ L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
K+ ++VEL+ Y + + +E L +I+ + +++
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 139
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA---KISDFDLSNQAPDAAARLHSTR 234
L Y H+ IIHR++K NVLL + + K+ DF ++ Q ++ L +
Sbjct: 140 --LEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG--LVAGG 192
Query: 235 VLGTFGYHAPE 245
+GT + APE
Sbjct: 193 RVGTPHFMAPE 203
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPEVVTRYY 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L +Y G + + Y + + + ++ ++ + R L
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLA 136
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 318
Query: 239 FGYHAPE 245
Y APE
Sbjct: 319 PTYLAPE 325
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 304
Query: 239 FGYHAPE 245
Y APE
Sbjct: 305 PTYLAPE 311
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLA---QVSMVSRLKN 120
+DN+ +G+G++ V V ++ G A K +++ K ++F + + +L++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V L + L ++ + G L DI+ S A
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQI 113
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDD---DIAKISDFDLSNQAPDAAARLHSTRVL 236
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H
Sbjct: 114 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FA 167
Query: 237 GTFGYHAPE 245
GT GY +PE
Sbjct: 168 GTPGYLSPE 176
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 17/192 (8%)
Query: 62 KEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLAQVSMVSRLKN 120
+++ D F + G+G++G V G +S G + AIKK+ + L + ++ L +
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH 78
Query: 121 ENVVELVGY-YVDGPL-RVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
N+V+L Y Y G R Y + + D LH +V
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV-FLFQ 137
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFD-DDIAKISDF----DLSNQAPDAAARLHST 233
R + LH + + HR+IK NVL+ + D K+ DF LS P+ A
Sbjct: 138 LIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA------ 190
Query: 234 RVLGTFGYHAPE 245
+ + Y APE
Sbjct: 191 -YICSRYYRAPE 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLA---QVSMVSRLKN 120
+DN+ +G+G++ V V ++ G A K +++ K ++F + + +L++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V L + L ++ + G L DI+ S A
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQI 137
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDD---DIAKISDFDLSNQAPDAAARLHSTRVL 236
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H
Sbjct: 138 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FA 191
Query: 237 GTFGYHAPE 245
GT GY +PE
Sbjct: 192 GTPGYLSPE 200
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 73 LIGEGSYGRVYFGV-LRSGRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELVGY 129
++G+G+ V+ G ++G AIK + S +P + + ++ +L ++N+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 130 YVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
+ R VL E GSL+ +L L ++ + + G+ +L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG------LPESEFLIVLRDVVGGMNHLR 129
Query: 188 EKAEPRIIHRNIKSSNVL-LFDDD---IAKISDFDLSNQAPD 225
E I+HRNIK N++ + +D + K++DF + + D
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLA---QVSMVSRLKN 120
+DN+ +G+G++ V V ++ G A K +++ K ++F + + +L++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V L + L ++ + G L DI+ S A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQI 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDD---DIAKISDFDLSNQAPDAAARLHSTRVL 236
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FA 168
Query: 237 GTFGYHAPE 245
GT GY +PE
Sbjct: 169 GTPGYLSPE 177
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 44/189 (23%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKL---DSSKQPDQEFLAQVSMVSRLKNENVVELVGY 129
IGEG+YG V+ R + A+K++ D + L ++ ++ LK++N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--- 66
Query: 130 YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG----------- 178
HD+LH + G
Sbjct: 67 -------------------HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 179 --AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
+GL + H + ++HR++K N+L+ + K++DF L+ +A R +S V+
Sbjct: 108 FQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLA-RAFGIPVRCYSAEVV 163
Query: 237 GTFGYHAPE 245
T Y P+
Sbjct: 164 -TLWYRPPD 171
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
Query: 65 TDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLDSSKQPDQEFLA---QVSMVSRLKN 120
+DN+ +G+G++ V V ++ G A K +++ K ++F + + +L++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 179
N+V L + L ++ + G L DI+ S A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQI 114
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDD---DIAKISDFDLSNQAPDAAARLHSTRVL 236
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FA 168
Query: 237 GTFGYHAPE 245
GT GY +PE
Sbjct: 169 GTPGYLSPE 177
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 183 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 241
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V G Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GAVNY 222
Query: 242 HAPE 245
PE
Sbjct: 223 MPPE 226
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 75/206 (36%), Gaps = 46/206 (22%)
Query: 57 SVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAA-AIKKLDSSK------QPDQEFL 109
S+ EL++K + IG+GSYG V + RA AIK ++ +K + +
Sbjct: 20 SLLELQKK---YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIK 76
Query: 110 AQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX---- 165
+V ++ +L + N+ L Y D L E G L D L+
Sbjct: 77 TEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 166 -----------------------XLSWAQRVKIAVGAAR----GLEYLHEKAEPRIIHRN 198
L + QR K+ R L YLH + I HR+
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRD 193
Query: 199 IKSSNVLLFDDDI--AKISDFDLSNQ 222
IK N L + K+ DF LS +
Sbjct: 194 IKPENFLFSTNKSFEIKLVDFGLSKE 219
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 18/171 (10%)
Query: 66 DNFGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
+ F IG GS+G +Y G +++ AI KL++ K + L + + L+ +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAI-KLENVKTKHPQLLYESKIYRILQGGTGI 65
Query: 125 ELVGYY-VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGL 183
V ++ V+G VL + D+L LS + +A +
Sbjct: 66 PNVRWFGVEGDYNVL---------VMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 116
Query: 184 EYLHEKAEPRIIHRNIKSSNVLLFDDDIAK---ISDFDLSNQAPDAAARLH 231
E++H K+ +HR+IK N L+ A I DF L+ + D + H
Sbjct: 117 EFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQP---DQEFLAQVSMVSRLKNE 121
D + LIG GSYG V + R AIKK+ + + L ++++++RL ++
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 122 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXX--XXXXXXXXXLSWAQRVKIAVGA 179
+VV+++ + P V ++ L+ +L L+ +
Sbjct: 113 HVVKVLDIVI--PKDVEKFD-----ELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNL 165
Query: 180 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS 220
G++Y+H I+HR++K +N L+ D K+ DF L+
Sbjct: 166 LVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L A A + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMVPFVVTRYY 193
Query: 242 HAPE 245
APE
Sbjct: 194 RAPE 197
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 196 HRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA-ARLHSTRVLGTFGYHAPE 245
HR++K N+L+ DD A + DF +++ D +L +T +GT Y APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPE 205
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 73 LIGEGSYGRVYFGV-LRSGRAAAIKKLD--SSKQPDQEFLAQVSMVSRLKNENVVELVGY 129
++G+G+ V+ G ++G AIK + S +P + + ++ +L ++N+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 130 YVDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
+ R VL E GSL+ +L L ++ + + G+ +L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG------LPESEFLIVLRDVVGGMNHLR 129
Query: 188 EKAEPRIIHRNIKSSNVL-LFDDD---IAKISDFDLSNQAPD 225
E I+HRNIK N++ + +D + K++DF + + D
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
G+++LH IIHR++K SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 242 HAPE 245
APE
Sbjct: 192 RAPE 195
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPAFVAPE 187
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 78
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 79 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 132 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 173
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 78 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 78 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 113
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 114 EATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 169
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 170 GNEFKN--IFGTPEFVAPE 186
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 113
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 114 EATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 169
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 170 GNEFKN--IFGTPEFVAPE 186
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 85
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 86 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 139 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 180
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 90
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 91 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL 206
KI +GL+YLH K RIIH +IK N+LL
Sbjct: 150 KIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 96
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 97 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 150 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 191
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 81
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 82 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 176
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 78 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Query: 100 SSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXX 159
S K +F ++ +++ +KNE + G + + YE+ S+ +
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFV 139
Query: 160 XXXXXXXLSWAQRVKIAVGAA-RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFD 218
Q +K + + Y+H E I HR++K SN+L+ + K+SDF
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 219 LSNQAPDAAARLHSTRVLGTFGYHAPE 245
S D ++ +R GT+ + PE
Sbjct: 198 ESEYMVD--KKIKGSR--GTYEFMPPE 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 230
Q V A + GL +LH++ II+R++K NV+L + KI+DF + + +
Sbjct: 121 QAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGV 175
Query: 231 HSTRVLGTFGYHAPE 245
+ GT Y APE
Sbjct: 176 TTREFCGTPDYIAPE 190
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 174 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL 206
KI +GL+YLH K RIIH +IK N+LL
Sbjct: 134 KIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 164
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 89
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 90 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 89
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 90 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 113
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L +Y G + Y + + + ++ ++ + R L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLA 172
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 173 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 82
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 83 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 136 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 111
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 112 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 111
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 112 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 105
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
L +Y G + Y + + + ++ ++ + R L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLA 164
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 165 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 200
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 156
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 157 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 210 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 251
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K+ ++ ++ +L + N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 115
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 116 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 210
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K ++ ++ +L + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 78 LRYFFYSSG-------EKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDD 210
+GL+YLH K +IIH +IK N+L+ DD
Sbjct: 151 QGLDYLHSKC--KIIHTDIKPENILMCVDD 178
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 44/189 (23%)
Query: 74 IGEGSYGRVYFGVLR-SGRAAAIKKL---DSSKQPDQEFLAQVSMVSRLKNENVVELVGY 129
IGEG+YG V+ R + A+K++ D + L ++ ++ LK++N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--- 66
Query: 130 YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG----------- 178
HD+LH + G
Sbjct: 67 -------------------HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 179 --AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 236
+GL + H + ++HR++K N+L+ + K+++F L+ +A R +S V+
Sbjct: 108 FQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA-RAFGIPVRCYSAEVV 163
Query: 237 GTFGYHAPE 245
T Y P+
Sbjct: 164 -TLWYRPPD 171
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K ++ ++ +L + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 78 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 22/165 (13%)
Query: 67 NFGTNSLIGEGSYGRVYFGVL-RSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVE 125
++ +IG GS+G VY L SG AIKK+ K ++ ++ +L + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 126 L-VGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI------AVG 178
L +Y G E + L+ +L Q + +
Sbjct: 78 LRYFFYSSG-------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDD-IAKISDFDLSNQ 222
R L Y+H I HR+IK N+LL D + K+ DF + Q
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 242 HAPE 245
APE
Sbjct: 220 IAPE 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 111 QVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWA 170
+VS++ +++ NV+ L Y + +L E + G L D L L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL---------AEKESLTEE 114
Query: 171 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDA 226
+ + G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 115 EATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DF 170
Query: 227 AARLHSTRVLGTFGYHAPE 245
+ + GT + APE
Sbjct: 171 GNEFKN--IFGTPEFVAPE 187
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 187
Query: 242 HAPE 245
APE
Sbjct: 188 IAPE 191
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSK----QPDQEFLAQVSMVSRLKN 120
D F +G GS+GRV + +G A+K LD K + + L + ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+V+L + D + E+A G + H AQ V
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV------- 151
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+++ K++DF L+ + + + + GT
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-----VKGRTWXLCGTPE 203
Query: 241 YHAPE 245
Y APE
Sbjct: 204 YLAPE 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 176
Query: 242 HAPE 245
APE
Sbjct: 177 IAPE 180
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 172
Query: 242 HAPE 245
APE
Sbjct: 173 IAPE 176
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 19/184 (10%)
Query: 74 IGEGSYGRVYFGVLRSGRAA---AIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYY 130
+G G+YG VY + G+ A+K+++ + +++++ LK+ NV+ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVF 87
Query: 131 VDGPLR--VLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 188
+ R L +++A H I+ L + G+ YLH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWH-IIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 189 KAEPRIIHRNIKSSNVLLFDD-------DIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 241
++HR++K +N+L+ + IA + L N A L V+ TF Y
Sbjct: 147 NW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP--VVVTFWY 201
Query: 242 HAPE 245
APE
Sbjct: 202 RAPE 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 16/181 (8%)
Query: 68 FGTNSLIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQ--EFLAQVSMVSRLKNENVV 124
+ + IG G + +V + +G AIK +D + ++ + L+++++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 125 ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLE 184
+L + E+ G L D + LS + + +
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYI---------ISQDRLSEEETRVVFRQIVSAVA 122
Query: 185 YLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAP 244
Y+H + HR++K N+L + K+ DF L + P H G+ Y AP
Sbjct: 123 YVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAP 178
Query: 245 E 245
E
Sbjct: 179 E 179
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIVLT--- 174
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + A L GT
Sbjct: 175 ----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL-----CGT 222
Query: 239 FGYHAPE 245
Y APE
Sbjct: 223 PEYLAPE 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 73 LIGEGSYGRVY-FGVLRSGRAAAIKKLDSSKQPDQEFLA-QVSMVSRLKNENVVELVGYY 130
++G G +G+V+ +G A K + + D+E + ++S++++L + N+++L +
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 131 VDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKA 190
VL E+ G L D + L+ + G+ ++H+
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRI--------IDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 191 EPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQ-APDAAARLHSTRVLGTFGYHAPE 245
I+H ++K N+L + D KI DF L+ + P +++ GT + APE
Sbjct: 208 ---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLAPE 258
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 81/205 (39%), Gaps = 37/205 (18%)
Query: 31 GGFYVKEAPAKEMKTVTVQPIAVP--VISVDELKEKTDN-----FGTNSLIGEGSYGRVY 83
G F + AP + V + P+ P VI V KT + +IG GS+G V+
Sbjct: 1 GSFTMSNAP---LNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVF 57
Query: 84 FGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVG-YYVDGPLR------ 136
L AIKK+ K+ L + +V K+ NVV+L +Y +G +
Sbjct: 58 QAKLVESDEVAIKKVLQDKRFKNRELQIMRIV---KHPNVVDLKAFFYSNGDKKDEVFLN 114
Query: 137 -VLAY--EHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 193
VL Y E + S H + L Q + R L Y+H
Sbjct: 115 LVLEYVPETVYRASRH---YAKLKQTMPMLLIKLYMYQLL-------RSLAYIHSIG--- 161
Query: 194 IIHRNIKSSNVLLFDDD-IAKISDF 217
I HR+IK N+LL + K+ DF
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDF 186
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
V A A GL +L K II+R++K NV+L + KI+DF + + + + +
Sbjct: 445 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTT 499
Query: 233 TRVLGTFGYHAPE 245
GT Y APE
Sbjct: 500 KXFCGTPDYIAPE 512
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F IG GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ K++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 173 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 232
V A A GL +L K II+R++K NV+L + KI+DF + + + + +
Sbjct: 124 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTT 178
Query: 233 TRVLGTFGYHAPE 245
GT Y APE
Sbjct: 179 KXFCGTPDYIAPE 191
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F IG GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ K++DF + + + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSK----QPDQEFLAQVSMVSRLKN 120
D F +G GS+GRV + +G A+K LD K + + L + ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+V+L + D + E+A G + H AQ V
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV------- 151
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+++ +++DF L+ + + + + GT
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKR-----VKGRTWXLCGTPE 203
Query: 241 YHAPE 245
Y APE
Sbjct: 204 YLAPE 208
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSK----QPDQEFLAQVSMVSRLKN 120
D F +G GS+GRV + +G A+K LD K + + L + ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+V+L + D + E+A G + H AQ V
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV------- 151
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+++ K++DF + + L GT
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-----CGTPE 203
Query: 241 YHAPE 245
Y APE
Sbjct: 204 YLAPE 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSK----QPDQEFLAQVSMVSRLKN 120
D F +G GS+GRV + +G A+K LD K + + L + ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+V+L + D + E+A G + H AQ V
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQIV------- 151
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+++ K++DF + + + + + GT
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 241 YHAPE 245
Y APE
Sbjct: 204 YLAPE 208
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F IG GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ K++DF + + + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVV 124
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 125 ELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR-- 181
+ V+ P V L + +L+ +L + AA+
Sbjct: 96 QQA---VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 182 -GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+L+ K++DF + + + + + GT
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPE 204
Query: 241 YHAPE 245
Y APE
Sbjct: 205 YLAPE 209
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 47/211 (22%)
Query: 55 VISVDELKEKTDNFGTNSLIGEGSY-----------GRVY-------FGVLRSGRAAAIK 96
V+ + E++ + D+F +IG G++ G+VY + +L+ G + +
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 97 -KLDSSKQPDQEFLAQVSMVSRLKNENVVELV-GYYVDGPLRVLAYEHASKGSLHDILHX 154
+ D D+ ++ Q+ ++EN + LV YYV G L L + +
Sbjct: 110 EERDVLVNGDRRWITQLHFA--FQDENYLYLVMEYYVGGDLLTLLSKFGER--------- 158
Query: 155 XXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKI 214
+ + +A+ + L Y +HR+IK N+LL ++
Sbjct: 159 ------IPAEMARFYLAEIVMAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRL 203
Query: 215 SDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+DF S A + S +GT Y +PE
Sbjct: 204 ADFG-SCLKLRADGTVRSLVAVGTPDYLSPE 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN 122
+ D F +G GS+GRV + SG A+K LD K + ++ + NE
Sbjct: 26 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------VVKLKQIEHTLNEK 79
Query: 123 -VVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+++ V + P V L + +L+ ++ + AA
Sbjct: 80 RILQAVNF----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 181 R---GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 237
+ EYLH +I+R++K N+L+ + +++DF + + L G
Sbjct: 136 QIVLTFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL-----CG 187
Query: 238 TFGYHAPE 245
T Y APE
Sbjct: 188 TPEYLAPE 195
>pdb|1W6J|A Chain A, Structure Of Human Osc In Complex With Ro 48-8071
Length = 732
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 91 RAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASK 145
R A++KL D F +S+ K N+ LV +YVDGP EH S+
Sbjct: 312 RQRAVQKLYEHIVADDRFTKSISIGPISKTINM--LVRWYVDGPASTAFQEHVSR 364
>pdb|1W6K|A Chain A, Structure Of Human Osc In Complex With Lanosterol
Length = 732
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 91 RAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASK 145
R A++KL D F +S+ K N+ LV +YVDGP EH S+
Sbjct: 312 RQRAVQKLYEHIVADDRFTKSISIGPISKTINM--LVRWYVDGPASTAFQEHVSR 364
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSK----QPDQEFLAQVSMVSRLKN 120
D F +G GS+GRV + +G A+K LD K + + L + ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+V+L + D + E+A G + H AQ V
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV------- 151
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+++ +++DF + + L GT
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPE 203
Query: 241 YHAPE 245
Y APE
Sbjct: 204 YLAPE 208
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRLKN 120
D F +G GS+GRV + +G A+K LD K + + L + ++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+V+L + D + E+A G + H AQ V
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV------- 152
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+++ K++DF + + + + + GT
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPE 204
Query: 241 YHAPE 245
Y APE
Sbjct: 205 YLAPE 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + + + + GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 71/191 (37%), Gaps = 34/191 (17%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGY---------YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 174
++ V + + D + E+A G + H AQ V
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV- 152
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 234
EYLH +I+R++K N+++ K++DF + + L
Sbjct: 153 ------LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---- 199
Query: 235 VLGTFGYHAPE 245
GT Y APE
Sbjct: 200 -CGTPEYLAPE 209
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 34/191 (17%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGY---------YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 174
++ V + + D + E+A G + L S
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---------FSEPHARF 146
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 234
A EYLH +I+R++K N+++ K++DF + + + +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWX 198
Query: 235 VLGTFGYHAPE 245
+ GT Y APE
Sbjct: 199 LCGTPEYLAPE 209
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 22/185 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSK----QPDQEFLAQVSMVSRLKN 120
D F +G GS+GRV + +G A+K LD K + + L + ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 121 ENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+V+L + D + E+ + G + H AQ V
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV------- 151
Query: 181 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 240
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPE 203
Query: 241 YHAPE 245
Y APE
Sbjct: 204 YLAPE 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 24/188 (12%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN 122
+ D F +G GS+GRV + SG A+K LD K + ++ + NE
Sbjct: 34 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------VVKLKQIEHTLNEK 87
Query: 123 -VVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+++ V + P V L + +L+ ++ + AA
Sbjct: 88 RILQAVNF----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 181 R---GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 237
+ EYLH +I+R++K N+L+ +++DF + + L G
Sbjct: 144 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CG 195
Query: 238 TFGYHAPE 245
T Y APE
Sbjct: 196 TPEYLAPE 203
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 34/191 (17%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGY---------YVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 174
++ V + + D + E+A G + H AQ V
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQIV- 152
Query: 175 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 234
EYLH +I+R++K N+++ K++DF + + + +
Sbjct: 153 ------LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWX 198
Query: 235 VLGTFGYHAPE 245
+ GT Y APE
Sbjct: 199 LCGTPEYLAPE 209
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIVLT--- 174
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + + + + GT
Sbjct: 175 ----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGT 222
Query: 239 FGYHAPE 245
Y APE
Sbjct: 223 PEYLAPE 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + + + + GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + + + + GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 40 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 152
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 153 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 202
Query: 239 FGYHAPE 245
Y APE
Sbjct: 203 PEYLAPE 209
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 24/188 (12%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN 122
+ D F +G GS+GRV + SG A+K LD K + ++ + NE
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------VVKLKQIEHTLNEK 92
Query: 123 -VVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+++ V + P V L + +L+ ++ + AA
Sbjct: 93 RILQAVNF----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 181 R---GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 237
+ EYLH +I+R++K N+L+ +++DF + + L G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CG 200
Query: 238 TFGYHAPE 245
T Y APE
Sbjct: 201 TPEYLAPE 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 80
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 81 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 137 VLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-----CGTP 188
Query: 240 GYHAPE 245
Y APE
Sbjct: 189 EYLAPE 194
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 22/157 (14%)
Query: 73 LIGEGSYGRVYFGV-LRSGRAAAIKKLDSSKQPDQ---EFLAQVSMVSRLK-NENVVELV 127
++GEG++ RV + L + + A+K ++ KQP +V M+ + + + NV+EL+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 128 GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLH 187
++ + L +E GS+ +H + A L++LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---------VVQDVASALDFLH 128
Query: 188 EKAEPRIIHRNIKSSNVLLFDDDI---AKISDFDLSN 221
K I HR++K N+L + KI DFDL +
Sbjct: 129 NKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGS 162
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 96 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 203
Query: 240 GYHAPE 245
Y APE
Sbjct: 204 EYLAPE 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 24/188 (12%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN 122
+ D F +G GS+GRV + SG A+K LD K + ++ + NE
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------VVKLKQIEHTLNEK 92
Query: 123 -VVELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 180
+++ V + P V L + +L+ ++ + AA
Sbjct: 93 RILQAVNF----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 181 R---GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 237
+ EYLH +I+R++K N+L+ +++DF + + L G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CG 200
Query: 238 TFGYHAPE 245
T Y APE
Sbjct: 201 TPEYLAPE 208
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 96 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 203
Query: 240 GYHAPE 245
Y APE
Sbjct: 204 EYLAPE 209
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L Y +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L Y +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK------VVKLKQIEHTLNEKRI 94
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L Y +L+ ++ + AA+
Sbjct: 95 LQAVNF----PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 202
Query: 240 GYHAPE 245
Y APE
Sbjct: 203 EYLAPE 208
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYF-GVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 96 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-----CGTP 203
Query: 240 GYHAPE 245
Y APE
Sbjct: 204 EYLAPE 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + + + + GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLAGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|3UNF|H Chain H, Mouse 20s Immunoproteasome In Complex With Pr-957
pdb|3UNF|V Chain V, Mouse 20s Immunoproteasome In Complex With Pr-957
pdb|3UNH|H Chain H, Mouse 20s Immunoproteasome
pdb|3UNH|V Chain V, Mouse 20s Immunoproteasome
Length = 234
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 77 GSYGRVYFGVLRSGRAAAIKKLDSSKQPD------QEFLAQ 111
GSY R+ F L SG+ AA+ L+ QP+ QE L +
Sbjct: 117 GSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVE 157
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK------QPDQEFLAQVSMVSRL 118
D + +IG+G + V + R +G+ A+K +D +K ++ + S+ L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
K+ ++VEL+ Y + + +E L +I+ + +++
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 139
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLL 206
L Y H+ IIHR++K VLL
Sbjct: 140 --LEALRYCHDN---NIIHRDVKPHCVLL 163
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 22/191 (11%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK------QPDQEFLAQVSMVSRL 118
D + +IG+G + V + R +G+ A+K +D +K ++ + S+ L
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSL-HDILHXXXXXXXXXXXXXLSWAQRVKIAV 177
K+ ++VEL+ Y + + +E L +I+ + +++
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 141
Query: 178 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA---KISDFDLSNQAPDAAARLHSTR 234
L Y H+ IIHR++K VLL + + K+ F ++ Q ++ L +
Sbjct: 142 --LEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGG 194
Query: 235 VLGTFGYHAPE 245
+GT + APE
Sbjct: 195 RVGTPHFMAPE 205
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 182 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-----AKISDFDLSNQAPDAAARLHSTR-- 234
GL +LH I+HR++K N+L+ + A ISDF L + A R +R
Sbjct: 130 GLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL--AVGRHSFSRRS 184
Query: 235 -VLGTFGYHAPE 245
V GT G+ APE
Sbjct: 185 GVPGTEGWIAPE 196
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 22/187 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+++ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 201
Query: 239 FGYHAPE 245
Y APE
Sbjct: 202 PEYLAPE 208
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 176 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 235
A A L YLH I++R++K N+LL ++DF L + + + ++
Sbjct: 145 AAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTF 199
Query: 236 LGTFGYHAPE 245
GT Y APE
Sbjct: 200 CGTPEYLAPE 209
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 115
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 116 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 172 VLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 223
Query: 240 GYHAPE 245
Y APE
Sbjct: 224 EYLAPE 229
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 96 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 203
Query: 240 GYHAPE 245
Y APE
Sbjct: 204 EYLAPE 209
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 87
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 88 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 144 VLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 195
Query: 240 GYHAPE 245
Y APE
Sbjct: 196 EYLAPE 201
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 96 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 203
Query: 240 GYHAPE 245
Y APE
Sbjct: 204 EYLAPE 209
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 22/186 (11%)
Query: 64 KTDNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSK----QPDQEFLAQVSMVSRL 118
+ D F +G GS+GRV + SG A+K LD K + + L + ++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 119 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 178
+V+L + D + E+ + G + H AQ V
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV----- 151
Query: 179 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 238
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 --LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGT 201
Query: 239 FGYHAP 244
Y AP
Sbjct: 202 PEYLAP 207
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 66 DNFGTNSLIGEGSYGRVYFGVLR-SGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNEN-V 123
D F +G GS+GRV + +G A+K LD K + ++ + NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRI 95
Query: 124 VELVGYYVDGPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR- 181
++ V + P V L + +L+ ++ + AA+
Sbjct: 96 LQAVNF----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 182 --GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 239
EYLH +I+R++K N+L+ +++DF + + L GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTP 203
Query: 240 GYHAPE 245
Y APE
Sbjct: 204 EYLAPE 209
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 195 IHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+HR+IK NVLL + +++DF + D + S+ +GT Y +PE
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPE 246
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 195 IHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPE 245
+HR+IK NVLL + +++DF + D + S+ +GT Y +PE
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPE 262
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,348,924
Number of Sequences: 62578
Number of extensions: 285622
Number of successful extensions: 2230
Number of sequences better than 100.0: 953
Number of HSP's better than 100.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 980
Number of HSP's gapped (non-prelim): 1053
length of query: 245
length of database: 14,973,337
effective HSP length: 96
effective length of query: 149
effective length of database: 8,965,849
effective search space: 1335911501
effective search space used: 1335911501
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)