Your job contains 1 sequence.
>025998
MEKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG
GCRKNGRAKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPDNVV
QNDDFNVHNVMGNGDLNILGEFPQVFGQLQEEEDRRVQDFLEDDMVNAHGLQALLGDEIV
DHQVALWSDQAETETLPNFTWQRAMFQLQDFDSFPADDQLKASANLISDNWTSFDLPGFE
LYSRP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025998
(245 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2027027 - symbol:AT1G21340 species:3702 "Arabi... 383 1.9e-35 1
TAIR|locus:2079954 - symbol:AT3G52440 species:3702 "Arabi... 360 5.2e-33 1
TAIR|locus:2159275 - symbol:OBP4 "OBF binding protein 4" ... 312 3.3e-30 2
TAIR|locus:2144030 - symbol:TMO6 "TARGET OF MONOPTEROS 6"... 320 9.1e-29 1
TAIR|locus:2019499 - symbol:AT1G64620 species:3702 "Arabi... 316 2.4e-28 1
TAIR|locus:2056588 - symbol:AT2G28510 species:3702 "Arabi... 316 2.4e-28 1
TAIR|locus:2181773 - symbol:AT5G02460 species:3702 "Arabi... 286 2.5e-28 2
TAIR|locus:2134981 - symbol:AT4G24060 species:3702 "Arabi... 313 5.0e-28 1
TAIR|locus:2039959 - symbol:DAG2 "DOF AFFECTING GERMINATI... 288 1.1e-27 2
TAIR|locus:2170753 - symbol:HCA2 "HIGH CAMBIAL ACTIVITY2"... 301 9.4e-27 1
TAIR|locus:2053175 - symbol:AT2G28810 species:3702 "Arabi... 293 6.6e-26 1
TAIR|locus:2094746 - symbol:DOF2 "DOF zinc finger protein... 290 1.4e-25 1
TAIR|locus:2040746 - symbol:DOF2.4 "DNA binding with one ... 289 1.8e-25 1
TAIR|locus:2155755 - symbol:AT5G65590 species:3702 "Arabi... 289 1.8e-25 1
TAIR|locus:2134658 - symbol:AT4G00940 species:3702 "Arabi... 287 2.9e-25 1
TAIR|locus:2079492 - symbol:DAG1 "dof affecting germinati... 285 4.6e-25 1
TAIR|locus:2026595 - symbol:OBP2 species:3702 "Arabidopsi... 284 5.9e-25 1
TAIR|locus:2017567 - symbol:DOF1 "DOF zinc finger protein... 279 2.0e-24 1
TAIR|locus:2085697 - symbol:DOF6 "DOF transcription facto... 268 2.9e-23 1
TAIR|locus:2032153 - symbol:AT1G28310 species:3702 "Arabi... 264 7.8e-23 1
TAIR|locus:2074850 - symbol:OBP1 "OBF binding protein 1" ... 263 1.0e-22 1
TAIR|locus:2133079 - symbol:DOF4.4 "DNA-binding with One ... 259 2.6e-22 1
TAIR|locus:505006172 - symbol:AT1G47655 species:3702 "Ara... 257 4.3e-22 1
TAIR|locus:2121041 - symbol:DOF4.7 "DNA binding with one ... 257 4.3e-22 1
TAIR|locus:2007151 - symbol:AT1G69570 species:3702 "Arabi... 256 8.4e-22 1
TAIR|locus:2158078 - symbol:AT5G66940 species:3702 "Arabi... 246 6.3e-21 1
TAIR|locus:2030006 - symbol:AT1G29160 species:3702 "Arabi... 236 7.2e-20 1
TAIR|locus:2133064 - symbol:DOF4.3 "AT4G21040" species:37... 236 7.2e-20 1
TAIR|locus:2079152 - symbol:CDF3 "cycling DOF factor 3" s... 241 7.8e-20 1
TAIR|locus:2164860 - symbol:CDF2 "cycling DOF factor 2" s... 240 1.1e-19 1
TAIR|locus:2055506 - symbol:AT2G34140 species:3702 "Arabi... 234 1.2e-19 1
TAIR|locus:2154079 - symbol:CDF1 "AT5G62430" species:3702... 233 1.5e-19 1
TAIR|locus:2127353 - symbol:DOF4.5 "DNA-binding with One ... 230 3.1e-19 1
TAIR|locus:2133149 - symbol:ATDOF4.2 "AT4G21030" species:... 178 1.0e-13 1
>TAIR|locus:2027027 [details] [associations]
symbol:AT1G21340 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC015447
EMBL:DQ446268 IPI:IPI00548608 RefSeq:NP_173556.1 UniGene:At.51708
EnsemblPlants:AT1G21340.1 GeneID:838733 KEGG:ath:AT1G21340
GeneFarm:4455 TAIR:At1g21340 eggNOG:NOG324820 InParanoid:P68349
OMA:GRNENRP PhylomeDB:P68349 ProtClustDB:CLSN2913539
ArrayExpress:P68349 Genevestigator:P68349 Uniprot:P68349
Length = 260
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 97/244 (39%), Positives = 129/244 (52%)
Query: 3 KKWKPDVE----TAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPV 58
+KWK E TAP+CPRCAS NTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRN+PV
Sbjct: 24 EKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPV 83
Query: 59 GGGCRKNGRAK-SSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPD 117
GGGCRK R++ +S ++ N +RP + D D S+P G SDIDLA VFA T D
Sbjct: 84 GGGCRKRSRSRQNSHKRFGRNENRPDGLINQD--DGFQSSPPG-SDIDLAAVFAQYVT-D 139
Query: 118 NVVQNDDFNVHNVMGNGDLNILGEFPQVFGQLQEEEDRRVQDFLEDDMVNAHGLQALLGD 177
+ D + + + + +E D + + E + + Q D
Sbjct: 140 RSPSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNNLT----QKTKED 195
Query: 178 EIVDHQVALWSDQAETETLPNFTWQRAMFQLQDFDSFPADDQLKASANLI--SDNWTSFD 235
+ V Q L D+ E + + ++ + DQL + + + DNW+S D
Sbjct: 196 QEVFGQF-LQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGDNWSSTD 254
Query: 236 LPGF 239
L F
Sbjct: 255 LTRF 258
>TAIR|locus:2079954 [details] [associations]
symbol:AT3G52440 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL050300
IPI:IPI00523054 PIR:T08455 RefSeq:NP_190812.1 UniGene:At.53903
EnsemblPlants:AT3G52440.1 GeneID:824409 KEGG:ath:AT3G52440
GeneFarm:4465 TAIR:At3g52440 eggNOG:NOG271786 InParanoid:Q9SVC5
OMA:YANFLNP PhylomeDB:Q9SVC5 ProtClustDB:CLSN2915499
Genevestigator:Q9SVC5 Uniprot:Q9SVC5
Length = 247
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 98/249 (39%), Positives = 130/249 (52%)
Query: 5 WKPDV----ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 60
W+P+ E PSCPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 13 WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72
Query: 61 GCRKNGRAKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGS-DIDLAVVFANSSTP--- 116
GCRK+ R KSS NN + + +S + P GGS IDLA+V+AN P
Sbjct: 73 GCRKSRRPKSSSG----NNTKTSLTANSGN-------PGGGSPSIDLALVYANFLNPKPD 121
Query: 117 DNVVQND------DFNVHNVMGNGDLNILGEFPQVFGQLQEEEDRRVQDFLEDDMVNAHG 170
++++Q + DF V N G ++ G + V+ +E+ N G
Sbjct: 122 ESILQENCDLATTDFLVDNPTGTS-MDPSWSMDINDGH-HDHYINPVEHIVEECGYN--G 177
Query: 171 LQALLGDEIVDHQV-ALWSDQ---AETETLPNFTWQRAMFQLQDFDSFPADDQLKASANL 226
L G+E++ +WSD T +A+ + F D+ S NL
Sbjct: 178 LPPFPGEELLSLDTNGVWSDALLIGHNHVDVGVTPVQAVHE--PVVHFA--DESNDSTNL 233
Query: 227 ISDNWTSFD 235
+ +W+ FD
Sbjct: 234 LFGSWSPFD 242
>TAIR|locus:2159275 [details] [associations]
symbol:OBP4 "OBF binding protein 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AB015472 EMBL:AF155817
EMBL:AY056413 EMBL:AY081709 EMBL:AY085856 IPI:IPI00530257
RefSeq:NP_200893.1 UniGene:At.20219 EnsemblPlants:AT5G60850.1
GeneID:836206 KEGG:ath:AT5G60850 GeneFarm:4392 TAIR:At5g60850
eggNOG:NOG253520 HOGENOM:HOG000090954 OMA:WSQSQWT PhylomeDB:Q8LDR0
ProtClustDB:CLSN2686706 Genevestigator:Q8LDR0 GermOnline:AT5G60850
Uniprot:Q8LDR0
Length = 307
Score = 312 (114.9 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 56/101 (55%), Positives = 71/101 (70%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRK 74
CPRC S NTKFCYYNNY+LSQPR+FCK CRRYWTKGG LRNVPVGGGCRK R+K+ +
Sbjct: 53 CPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQVP 112
Query: 75 SPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSST 115
S + D+P + H ++ ST + S ++ +NS+T
Sbjct: 113 SSSSADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASNSTT 153
Score = 37 (18.1 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 222 ASANLISDNWTSFDLPGFELY 242
A+A + S FD+P ++Y
Sbjct: 161 AAAEVASSVIPGFDMPNMKIY 181
>TAIR|locus:2144030 [details] [associations]
symbol:TMO6 "TARGET OF MONOPTEROS 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048364
"root development" evidence=IEP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
HOGENOM:HOG000112244 ProtClustDB:CLSN2684760 EMBL:AB026632
EMBL:BT005866 EMBL:AY086054 IPI:IPI00545477 RefSeq:NP_568920.1
UniGene:At.29177 PaxDb:Q84TE9 PRIDE:Q84TE9
EnsemblPlants:AT5G60200.1 GeneID:836142 KEGG:ath:AT5G60200
GeneFarm:4476 TAIR:At5g60200 eggNOG:NOG268327 OMA:KENATYA
PhylomeDB:Q84TE9 Genevestigator:Q84TE9 GermOnline:AT5G60200
Uniprot:Q84TE9
Length = 257
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 66/147 (44%), Positives = 87/147 (59%)
Query: 10 ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
E A CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWTKGG+LRN+PVGGGCRKN R+
Sbjct: 52 ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111
Query: 70 SSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFA--NSSTPDNVVQNDDFNV 127
SS +S P + + + + IDL++ FA N P + Q
Sbjct: 112 SSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQ---LGF 168
Query: 128 HNVMGNGDLNILGEFPQVFGQLQEEED 154
H+ +G+ + + +FG Q++E+
Sbjct: 169 HSELGSSHQS---DMEGMFGTSQQKEN 192
>TAIR|locus:2019499 [details] [associations]
symbol:AT1G64620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC009519 EMBL:BT004047 EMBL:BT005148 EMBL:AY084898
IPI:IPI00537731 PIR:E96669 RefSeq:NP_564836.1 UniGene:At.35979
IntAct:Q84JQ8 EnsemblPlants:AT1G64620.1 GeneID:842770
KEGG:ath:AT1G64620 GeneFarm:4460 TAIR:At1g64620 eggNOG:NOG247852
HOGENOM:HOG000239394 InParanoid:Q84JQ8 OMA:KPMNEIV PhylomeDB:Q84JQ8
ProtClustDB:CLSN2917381 Genevestigator:Q84JQ8 GermOnline:AT1G64620
Uniprot:Q84JQ8
Length = 352
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 71/163 (43%), Positives = 92/163 (56%)
Query: 1 MEKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 60
+E+K +P+ + A +CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 37 VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96
Query: 61 GCRKNGRAKS-SRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPDNV 119
G RKN R+ S S SP ++ K +++ P+ I A A + D
Sbjct: 97 GVRKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPLPHLNPKIGEA---AATKVQDLT 153
Query: 120 VQNDDFNVHNVMGNGDLNILGEFPQVFGQLQEEEDRRVQDFLE 162
N H V DLN+ F Q FG + + +FL+
Sbjct: 154 FSQGFGNAHEVK---DLNLA--FSQGFG-IGHNHHSSIPEFLQ 190
>TAIR|locus:2056588 [details] [associations]
symbol:AT2G28510 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC006587
EMBL:AY070421 EMBL:BT001954 EMBL:AY085635 IPI:IPI00520106
PIR:G84685 RefSeq:NP_565673.1 UniGene:At.28359 DNASU:817399
EnsemblPlants:AT2G28510.1 GeneID:817399 KEGG:ath:AT2G28510
GeneFarm:4461 TAIR:At2g28510 eggNOG:NOG301259 HOGENOM:HOG000112244
OMA:GRESWNG PhylomeDB:Q8LE43 ProtClustDB:CLSN2688517
Genevestigator:Q8LE43 GermOnline:AT2G28510 Uniprot:Q8LE43
Length = 288
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 63/106 (59%), Positives = 74/106 (69%)
Query: 12 APSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSS 71
A +CPRC SPNTKFCYYNNYSLSQPRYFCK CRRYWTKGG+LRNVPVGGGCR+N R+ SS
Sbjct: 47 AQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSS 106
Query: 72 RRKSPFNNDRPKASCSSDHTDDAVST---PNG-GSD--IDLAVVFA 111
NN+ + +D + + T P+ G D IDL + FA
Sbjct: 107 AFSK--NNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFA 150
>TAIR|locus:2181773 [details] [associations]
symbol:AT5G02460 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:AL162874 EMBL:AL162971 EMBL:BX829408
IPI:IPI00547892 PIR:T48267 RefSeq:NP_195866.1 UniGene:At.33412
ProteinModelPortal:Q9LZ56 STRING:Q9LZ56 PRIDE:Q9LZ56
EnsemblPlants:AT5G02460.1 GeneID:830976 KEGG:ath:AT5G02460
GeneFarm:4474 TAIR:At5g02460 eggNOG:NOG272365 InParanoid:Q9LZ56
OMA:HHRAMAN PhylomeDB:Q9LZ56 ProtClustDB:CLSN2916772
Genevestigator:Q9LZ56 GermOnline:AT5G02460 Uniprot:Q9LZ56
Length = 399
Score = 286 (105.7 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 48/65 (73%), Positives = 56/65 (86%)
Query: 7 PDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNG 66
P ETA CPRC S NTKFCY+NNYSL+QPR+FCK CRRYWT+GG+LR+VPVGGGCR+N
Sbjct: 89 PLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNK 148
Query: 67 RAKSS 71
R K+S
Sbjct: 149 RTKNS 153
Score = 45 (20.9 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 112 NSSTPDNVVQNDDFNVHNVMGNGDL 136
NS + D+ ND ++ H M N +
Sbjct: 165 NSKSQDSATSNDQYH-HRAMANNQM 188
>TAIR|locus:2134981 [details] [associations]
symbol:AT4G24060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002343 EMBL:AL161560 HOGENOM:HOG000239394 EMBL:AL109619
EMBL:AY037220 EMBL:BT008771 EMBL:AY087686 IPI:IPI00536658
IPI:IPI00548740 PIR:T13450 RefSeq:NP_567693.1 UniGene:At.3662
STRING:Q8LAP8 PRIDE:Q8LAP8 EnsemblPlants:AT4G24060.1 GeneID:828506
KEGG:ath:AT4G24060 GeneFarm:4472 TAIR:At4g24060 eggNOG:NOG270420
InParanoid:Q8LAP8 OMA:SCSAMAT PhylomeDB:Q8LAP8
ProtClustDB:CLSN2917601 Genevestigator:Q8LAP8 GermOnline:AT4G24060
Uniprot:Q8LAP8
Length = 342
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 55/92 (59%), Positives = 66/92 (71%)
Query: 2 EKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
E+K +P+ + A +CPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWT+GGSLRN+PVGGG
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 62 CRKNGRAKSSRRKSPFNNDRPKASCSSDHTDD 93
RKN R+ SS N+ + H D
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133
>TAIR|locus:2039959 [details] [associations]
symbol:DAG2 "DOF AFFECTING GERMINATION 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
[GO:0006598 "polyamine catabolic process" evidence=RCA] [GO:0009698
"phenylpropanoid metabolic process" evidence=RCA] [GO:0042398
"cellular modified amino acid biosynthetic process" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0009409
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009845
GO:GO:0009416 EMBL:AC006418 HOGENOM:HOG000239394 EMBL:AJ237810
EMBL:AJ237811 EMBL:BT003328 EMBL:BT008842 IPI:IPI00533417
IPI:IPI00547843 PIR:G84904 RefSeq:NP_001031549.1 RefSeq:NP_182182.2
UniGene:At.43221 PRIDE:Q9ZPY0 EnsemblPlants:AT2G46590.2
GeneID:819271 KEGG:ath:AT2G46590 GeneFarm:4409 TAIR:At2g46590
eggNOG:NOG252364 InParanoid:Q9ZPY0 OMA:NARPNTI PhylomeDB:Q9ZPY0
ProtClustDB:CLSN2684099 Genevestigator:Q9ZPY0 GermOnline:AT2G46590
Uniprot:Q9ZPY0
Length = 369
Score = 288 (106.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 51/70 (72%), Positives = 58/70 (82%)
Query: 2 EKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
E+K +P + +CPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWT+GGSLRNVPVGG
Sbjct: 71 ERKARPQEKL--NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGS 128
Query: 62 CRKNGRAKSS 71
RKN R+ SS
Sbjct: 129 SRKNKRSSSS 138
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 78 NNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHNVMGNGDLN 137
+N+R +A S H V P G +L+ +S T + V +DD GN + N
Sbjct: 293 SNNRSEALHSDHHQQGRVLFPFGDQMKELS----SSITQE--VDHDDNQQQKSHGNNNNN 346
>TAIR|locus:2170753 [details] [associations]
symbol:HCA2 "HIGH CAMBIAL ACTIVITY2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0010067 "procambium histogenesis" evidence=IMP] [GO:0010087
"phloem or xylem histogenesis" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0010087
EMBL:AB009053 GO:GO:0010067 HOGENOM:HOG000239394 EMBL:BT020467
EMBL:BT020576 IPI:IPI00528642 RefSeq:NP_201099.1 UniGene:At.29026
EnsemblPlants:AT5G62940.1 GeneID:836414 KEGG:ath:AT5G62940
GeneFarm:4478 TAIR:At5g62940 eggNOG:NOG236688 InParanoid:Q9FM03
OMA:MALAHSH PhylomeDB:Q9FM03 ProtClustDB:CLSN2687377
Genevestigator:Q9FM03 GermOnline:AT5G62940 Uniprot:Q9FM03
Length = 372
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 51/94 (54%), Positives = 68/94 (72%)
Query: 3 KKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGC 62
++ +P + CPRC S +TKFCYYNNYSLSQPRYFCK CRRYWTKGG+LRN+PVGGGC
Sbjct: 63 RRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 122
Query: 63 RKNGRAKSSRRKSPFNNDRPKASCSSDHTDDAVS 96
RKN + SS S ++ + ++ + +T D ++
Sbjct: 123 RKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMA 156
>TAIR|locus:2053175 [details] [associations]
symbol:AT2G28810 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC005727 EMBL:BT032877 IPI:IPI00541552 PIR:B84689
RefSeq:NP_850126.1 UniGene:At.38565 PRIDE:Q9ZV33
EnsemblPlants:AT2G28810.1 GeneID:817430 KEGG:ath:AT2G28810
GeneFarm:4462 TAIR:At2g28810 eggNOG:NOG301760 HOGENOM:HOG000239956
InParanoid:Q9ZV33 OMA:DPPINWP PhylomeDB:Q9ZV33
ProtClustDB:CLSN2690762 Genevestigator:Q9ZV33 GermOnline:AT2G28810
Uniprot:Q9ZV33
Length = 340
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 54/99 (54%), Positives = 69/99 (69%)
Query: 1 MEKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 60
+ K +P E A CPRC S NTKFCY+NNY+L+QPR+FCK CRRYWT+GG+LRNVPVGG
Sbjct: 83 LAKNSQPP-EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGG 141
Query: 61 GCRKNGRAKSSRRKSPFNNDRPKASCSSDHTDDAVSTPN 99
GCR+N + KS KS ++ + K S S + +T N
Sbjct: 142 GCRRNKKGKSGNSKSS-SSSQNKQSTSMVNATSPTNTSN 179
>TAIR|locus:2094746 [details] [associations]
symbol:DOF2 "DOF zinc finger protein 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 EMBL:AB023045 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000005865 ProtClustDB:CLSN2679425
EMBL:AB017565 EMBL:AY045847 EMBL:AY150391 IPI:IPI00526237
PIR:T52045 RefSeq:NP_188764.1 UniGene:At.257
EnsemblPlants:AT3G21270.1 GeneID:821681 KEGG:ath:AT3G21270
GeneFarm:4401 TAIR:At3g21270 eggNOG:NOG280617 InParanoid:Q94AR6
OMA:GMEIGGS PhylomeDB:Q94AR6 Genevestigator:Q94AR6
GermOnline:AT3G21270 Uniprot:Q94AR6
Length = 204
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 53/83 (63%), Positives = 61/83 (73%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKS---- 70
CPRC SPNTKFCYYNNY+LSQPR+FCK CRRYWTKGG+LRNVPVGGG RKN +S
Sbjct: 31 CPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSS 90
Query: 71 SRRKSPFNNDRPKASCSSDHTDD 93
S SP N+ + K + + D D
Sbjct: 91 SSASSPSNSSQNKKTKNPDPDPD 113
>TAIR|locus:2040746 [details] [associations]
symbol:DOF2.4 "DNA binding with one finger 2.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:AC004684
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:BT030014 IPI:IPI00519602 PIR:T02525
RefSeq:NP_181295.1 UniGene:At.50120 EnsemblPlants:AT2G37590.1
GeneID:818336 KEGG:ath:AT2G37590 GeneFarm:4464 TAIR:At2g37590
eggNOG:NOG313751 OMA:DEWRSAS PhylomeDB:O80928
ProtClustDB:CLSN2912900 Genevestigator:O80928 GermOnline:AT2G37590
Uniprot:O80928
Length = 330
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 52/88 (59%), Positives = 63/88 (71%)
Query: 10 ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
E A CPRC S NTKFCY+NNYSL+QPR+FCK CRRYWT+GG+LRNVPVGGGCR+N R K
Sbjct: 86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145
Query: 70 SSRRKSPFNNDRPKASCSSDHTDDAVST 97
S+ NN+ S ++ + ST
Sbjct: 146 SNSNN---NNNSTATSNNTSFSSGNAST 170
>TAIR|locus:2155755 [details] [associations]
symbol:AT5G65590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AB026639 HOGENOM:HOG000090627 EMBL:BT014981 EMBL:BT015717
IPI:IPI00521298 RefSeq:NP_201362.1 UniGene:At.28900
EnsemblPlants:AT5G65590.1 GeneID:836685 KEGG:ath:AT5G65590
GeneFarm:4479 TAIR:At5g65590 eggNOG:NOG306856 InParanoid:Q9LSL6
OMA:SGRENTP PhylomeDB:Q9LSL6 ProtClustDB:CLSN2686628
Genevestigator:Q9LSL6 GermOnline:AT5G65590 Uniprot:Q9LSL6
Length = 316
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 62/130 (47%), Positives = 78/130 (60%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRK 74
CPRC SPNTKFCYYNNYSLSQPR+FCK CRRYWT+GG+LRNVP+GGGCRK KS +
Sbjct: 43 CPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKT--KKSIKPN 100
Query: 75 SPFNNDRPKASCS----SDHTDDAVS--TPNGGSDIDLAVVFANSSTPDNVVQNDD-FNV 127
S N P +S S S +D+ P D LA + N ++ N + ++
Sbjct: 101 SSMNT-LPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSLNKMNDLQLLNNQEVLDL 159
Query: 128 HNVMGNGDLN 137
+M +G N
Sbjct: 160 RPMMSSGREN 169
>TAIR|locus:2134658 [details] [associations]
symbol:AT4G00940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006457 "protein
folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009691 "cytokinin biosynthetic process" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AF013294 EMBL:AL161491
HOGENOM:HOG000239394 EMBL:AB493666 IPI:IPI00517988 PIR:F85012
PIR:T01552 RefSeq:NP_192003.2 UniGene:At.34496 PRIDE:Q9M161
EnsemblPlants:AT4G00940.1 GeneID:827952 KEGG:ath:AT4G00940
GeneFarm:4466 TAIR:At4g00940 eggNOG:NOG310367 PhylomeDB:Q9M161
ProtClustDB:CLSN2915022 Genevestigator:Q9M161 GermOnline:AT4G00940
Uniprot:Q9M161
Length = 294
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 69/164 (42%), Positives = 86/164 (52%)
Query: 2 EKKWKPDVETAP----SCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVP 57
EKK + T P +CPRC S NTKFCYYNNYSL+QPRY CK CRRYWT+GGSLRNVP
Sbjct: 53 EKKLMTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVP 112
Query: 58 VGGGCRKNGR-------AKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVF 110
VGGG RKN + SS + P N P SS + + T +D+ L+
Sbjct: 113 VGGGSRKNKKLPFPNSSTSSSTKNLPDLNP-PFVFTSSASSSNPSKTHQNNNDLSLSF-- 169
Query: 111 ANSSTPDNVVQNDDFNVHNVMGNGDLNILGEFPQVFGQLQEEED 154
+S D Q + + G N L + P Q ++E D
Sbjct: 170 -SSPMQDKRAQGHYGHFSEQVVTGGQNCLFQAPMGMIQFRQEYD 212
>TAIR|locus:2079492 [details] [associations]
symbol:DAG1 "dof affecting germination 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009845 "seed germination" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009639 "response to red or far red
light" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002686 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009639 EMBL:AL138642 HOGENOM:HOG000239394
ProtClustDB:CLSN2684099 IPI:IPI00892346 RefSeq:NP_001118885.1
UniGene:At.989 STRING:B3H6D1 PRIDE:B3H6D1 EnsemblPlants:AT3G61850.4
GeneID:825358 KEGG:ath:AT3G61850 OMA:IGHNTIN Genevestigator:B3H6D1
Uniprot:B3H6D1
Length = 324
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 55/83 (66%), Positives = 63/83 (75%)
Query: 1 ME-KKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVG 59
ME +K +P + +CPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWT+GGSLRNVPVG
Sbjct: 63 METRKARPQEKV--NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 120
Query: 60 GGCRKNGRAKSSRRKSPFNNDRP 82
G RKN R+ S+ SP N P
Sbjct: 121 GSSRKNKRS-STPLASPSNPKLP 142
>TAIR|locus:2026595 [details] [associations]
symbol:OBP2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0009625 "response to insect" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0010439 "regulation of glucosinolate biosynthetic process"
evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009595
"detection of biotic stimulus" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] [GO:0003002
"regionalization" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GO:GO:0005634 GO:GO:0009753 GO:GO:0009611 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC007583 GO:GO:0009625
HOGENOM:HOG000239956 ProtClustDB:CLSN2690762 GO:GO:0010439
GO:GO:0003002 IPI:IPI00657301 RefSeq:NP_001030988.1
UniGene:At.14846 STRING:Q2V4Q1 PRIDE:Q2V4Q1
EnsemblPlants:AT1G07640.3 GeneID:837277 KEGG:ath:AT1G07640
OMA:NIHENNN Genevestigator:Q2V4Q1 Uniprot:Q2V4Q1
Length = 339
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 47/75 (62%), Positives = 61/75 (81%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGR-AKSSRR 73
CPRC S NTKFCYYNNY+L+QPR+FCKGCRRYWT+GG+LRNVPVGGGCR+N + K+
Sbjct: 87 CPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNGNL 146
Query: 74 KSPFNNDRPKASCSS 88
KS ++ + +S ++
Sbjct: 147 KSSSSSSKQSSSVNA 161
>TAIR|locus:2017567 [details] [associations]
symbol:DOF1 "DOF zinc finger protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010200
"response to chitin" evidence=IEP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:AC025294 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010200 HOGENOM:HOG000005865 EMBL:AB017564 IPI:IPI00532555
PIR:T52044 RefSeq:NP_175581.1 UniGene:At.256 PRIDE:O82155
EnsemblPlants:AT1G51700.1 GeneID:841595 KEGG:ath:AT1G51700
GeneFarm:4400 TAIR:At1g51700 eggNOG:NOG318115 InParanoid:O82155
OMA:LASNMQM PhylomeDB:O82155 ProtClustDB:CLSN2679425
Genevestigator:O82155 GermOnline:AT1G51700 Uniprot:O82155
Length = 194
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 7 PDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNG 66
P+ E CPRC SPNTKFCYYNNY+LSQPR+FCK CRRYWTKGG+LRN+PVGGG RK+
Sbjct: 28 PEQEQL-KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSN 86
Query: 67 RAKSSRRKSPFNN 79
+ S S N
Sbjct: 87 KRSGSSPSSNLKN 99
>TAIR|locus:2085697 [details] [associations]
symbol:DOF6 "DOF transcription factor 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000112244 EMBL:AJ243033
EMBL:AL138657 EMBL:AY062783 EMBL:BT006284 IPI:IPI00532759
PIR:T47501 RefSeq:NP_190147.1 UniGene:At.478
EnsemblPlants:AT3G45610.1 GeneID:823703 KEGG:ath:AT3G45610
GeneFarm:4402 TAIR:At3g45610 eggNOG:NOG258725 OMA:NISNEQM
PhylomeDB:Q9M1E6 ProtClustDB:CLSN2684760 Genevestigator:Q9M1E6
GermOnline:AT3G45610 Uniprot:Q9M1E6
Length = 245
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 10 ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
E + CPRC S NTKFCYYNNYSLSQPRYFCK CRRYWTKGG LRN+P+GG RK+ R+
Sbjct: 37 EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSS 96
Query: 70 SSRR 73
S+ +
Sbjct: 97 SATK 100
>TAIR|locus:2032153 [details] [associations]
symbol:AT1G28310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
EMBL:AC021044 IPI:IPI00656949 RefSeq:NP_001031100.1
UniGene:At.40918 PRIDE:Q2V4K7 EnsemblPlants:AT1G28310.2
GeneID:839725 KEGG:ath:AT1G28310 HOGENOM:HOG000097069 OMA:MIVASSH
ProtClustDB:CLSN2719915 Genevestigator:Q2V4K7 Uniprot:Q2V4K7
Length = 325
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 44/55 (80%), Positives = 48/55 (87%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
CPRC S NTKFCYYNNYSLSQPR+FCK C+RYWT+GG+LRNVPVGG RKN R K
Sbjct: 43 CPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVK 97
>TAIR|locus:2074850 [details] [associations]
symbol:OBP1 "OBF binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0042545 "cell wall modification"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009751 GO:GO:0045787 GO:GO:0042545 EMBL:AL132976
HOGENOM:HOG000005865 EMBL:X89192 IPI:IPI00523996 PIR:T46072
RefSeq:NP_190610.1 UniGene:At.20758 IntAct:Q39088 PRIDE:Q39088
EnsemblPlants:AT3G50410.1 GeneID:824205 KEGG:ath:AT3G50410
GeneFarm:4389 TAIR:At3g50410 eggNOG:NOG293819 InParanoid:Q39088
OMA:EPRRIAM PhylomeDB:Q39088 Genevestigator:Q39088
GermOnline:AT3G50410 Uniprot:Q39088
Length = 253
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 64/134 (47%), Positives = 74/134 (55%)
Query: 10 ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
E P CPRC S NTKFCYYNNY+ SQPR+FCK CRRYWT GG+LR+VPVGGG RK+ AK
Sbjct: 28 EQLP-CPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKS--AK 84
Query: 70 SSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHN 129
SR S + SS VS NG V+F SS + V V
Sbjct: 85 RSRTCS---------NSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHT----VTE 131
Query: 130 VMGNGD-LNILGEF 142
G G L++ G F
Sbjct: 132 SDGKGSALSLCGSF 145
>TAIR|locus:2133079 [details] [associations]
symbol:DOF4.4 "DNA-binding with One Finger 4.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010154 "fruit development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:2000032 "regulation of secondary shoot formation" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010154 HOGENOM:HOG000097076 ProtClustDB:CLSN2685338
GO:GO:2000032 EMBL:AB493689 IPI:IPI00543578 PIR:T10647
RefSeq:NP_193837.1 UniGene:At.54450 PRIDE:Q9SUA9 DNASU:827852
EnsemblPlants:AT4G21050.1 GeneID:827852 KEGG:ath:AT4G21050
GeneFarm:4469 TAIR:At4g21050 eggNOG:NOG287569 OMA:NYSESQP
PhylomeDB:Q9SUA9 Genevestigator:Q9SUA9 GermOnline:AT4G21050
Uniprot:Q9SUA9
Length = 210
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 43/55 (78%), Positives = 46/55 (83%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
CPRC S NTKFC+YNNYS SQPRYFCK CRRYWT GG+LRN+PVGG CRK R K
Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKRLK 80
>TAIR|locus:505006172 [details] [associations]
symbol:AT1G47655 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC007519 EMBL:AB493502 IPI:IPI00541489 PIR:E96517
RefSeq:NP_564510.1 UniGene:At.38579 EnsemblPlants:AT1G47655.1
GeneID:841175 KEGG:ath:AT1G47655 GeneFarm:4459 TAIR:At1g47655
eggNOG:NOG248157 HOGENOM:HOG000005865 OMA:GLEISMQ
ProtClustDB:CLSN2917178 Genevestigator:Q9SX97 GermOnline:AT1G47655
Uniprot:Q9SX97
Length = 209
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 7 PDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNG 66
P++ CPRC S TKFCYYNNY+L+QPRY+CK CRRYWT+GG+LR+VPVGGG R++
Sbjct: 23 PNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRS- 81
Query: 67 RAKSSRRKSPFNNDRPKASCSS 88
SS+R F+ +S SS
Sbjct: 82 ---SSKRHRSFSTTATSSSSSS 100
>TAIR|locus:2121041 [details] [associations]
symbol:DOF4.7 "DNA binding with one finger 4.7"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010227 "floral organ abscission"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161592
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0010227 EMBL:AL035538 EMBL:BT005767
EMBL:BT006092 IPI:IPI00529950 PIR:T05627 RefSeq:NP_195513.2
UniGene:At.2738 EnsemblPlants:AT4G38000.1 GeneID:829956
KEGG:ath:AT4G38000 GeneFarm:4473 TAIR:At4g38000 eggNOG:NOG286318
HOGENOM:HOG000090627 OMA:TSGNHED PhylomeDB:Q84K52
ProtClustDB:CLSN2918298 Genevestigator:Q84K52 GermOnline:AT4G38000
Uniprot:Q84K52
Length = 246
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 50/85 (58%), Positives = 57/85 (67%)
Query: 6 KPDVETAP--SCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCR 63
+P T P CPRC S NTKFCYYNNYSLSQPR++CK CRRYWT+GG+LRNVP+GG R
Sbjct: 32 EPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTR 91
Query: 64 -KNGRAKSSRRKSP--FNNDRPKAS 85
KN SP F+N AS
Sbjct: 92 NKNKPCSLQVISSPPLFSNGTSSAS 116
>TAIR|locus:2007151 [details] [associations]
symbol:AT1G69570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC073178 HOGENOM:HOG000239772 EMBL:AF079504 EMBL:AC021046
EMBL:AK176346 EMBL:BT025623 IPI:IPI00525897 PIR:D96717 PIR:T51953
RefSeq:NP_177116.1 UniGene:At.10732 STRING:Q9SEZ3
EnsemblPlants:AT1G69570.1 GeneID:843293 KEGG:ath:AT1G69570
GeneFarm:4399 TAIR:At1g69570 eggNOG:NOG236464 OMA:RINDTNT
PhylomeDB:Q9SEZ3 ProtClustDB:CLSN2682558 Genevestigator:Q9SEZ3
GermOnline:AT1G69570 Uniprot:Q9SEZ3
Length = 399
Score = 256 (95.2 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 53/118 (44%), Positives = 70/118 (59%)
Query: 6 KPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
KPD + P CPRC S NTKFCYYNNY+++QPRYFC+ C+RYWT GGS+RNVPVG G RKN
Sbjct: 127 KPD-KLIP-CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184
Query: 66 GRAKSSRR-----KSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPDN 118
SS +N+ S ++ +V+ D A + A+S + +N
Sbjct: 185 KGWPSSNHYLQVTSEDCDNNNSGTILSFGSSESSVTETGKHQSGDTAKISADSVSQEN 242
>TAIR|locus:2158078 [details] [associations]
symbol:AT5G66940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000005865 EMBL:AB026640 EMBL:BT029523 IPI:IPI00549015
RefSeq:NP_201495.1 UniGene:At.66743 DNASU:836828
EnsemblPlants:AT5G66940.1 GeneID:836828 KEGG:ath:AT5G66940
GeneFarm:4480 TAIR:At5g66940 eggNOG:NOG310676 InParanoid:Q9FGD6
OMA:LINYNAA PhylomeDB:Q9FGD6 ProtClustDB:CLSN2916526
ArrayExpress:Q9FGD6 Genevestigator:Q9FGD6 GermOnline:AT5G66940
Uniprot:Q9FGD6
Length = 225
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 44/68 (64%), Positives = 52/68 (76%)
Query: 8 DVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGR 67
D + SCPRC S NTKFCYYNNY+ SQPR+FCK CRRYWT GG+LR++PVGG RK+
Sbjct: 27 DQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS-- 84
Query: 68 AKSSRRKS 75
+K SR S
Sbjct: 85 SKRSRTYS 92
>TAIR|locus:2030006 [details] [associations]
symbol:AT1G29160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC021043 HOGENOM:HOG000090574 ProtClustDB:CLSN2679679
EMBL:BT029990 IPI:IPI00521362 RefSeq:NP_174211.1 UniGene:At.64845
EnsemblPlants:AT1G29160.1 GeneID:839790 KEGG:ath:AT1G29160
GeneFarm:4458 TAIR:At1g29160 eggNOG:NOG279976 InParanoid:P68350
OMA:LRCYTDG PhylomeDB:P68350 ArrayExpress:P68350
Genevestigator:P68350 GermOnline:AT1G29160 Uniprot:P68350
Length = 175
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 6 KPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
+PD + P CPRC S TKFCY+NNY+++QPR+FCKGC+RYWT GG+LRNVPVG G RK+
Sbjct: 57 RPD-KIIP-CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKS 114
>TAIR|locus:2133064 [details] [associations]
symbol:DOF4.3 "AT4G21040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 EMBL:AB493688
IPI:IPI00544172 PIR:T10646 RefSeq:NP_193836.1 UniGene:At.64193
DNASU:827851 EnsemblPlants:AT4G21040.1 GeneID:827851
KEGG:ath:AT4G21040 GeneFarm:4468 TAIR:At4g21040 eggNOG:NOG279085
PhylomeDB:Q9SUB0 Genevestigator:Q9SUB0 Uniprot:Q9SUB0
Length = 232
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 44/71 (61%), Positives = 48/71 (67%)
Query: 6 KPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
KP C RC S NTKFCYYNNYS QPRYFCK CRRYWT GG+LRNVP+GG +
Sbjct: 18 KPPPPPPRVCARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGG----S 73
Query: 66 GRAKSSRRKSP 76
RAK +R P
Sbjct: 74 SRAKRTRINQP 84
>TAIR|locus:2079152 [details] [associations]
symbol:CDF3 "cycling DOF factor 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AL132955 HOGENOM:HOG000239772
EMBL:AF079503 EMBL:AY065152 EMBL:AY128757 EMBL:AY084628
IPI:IPI00547330 PIR:T45710 RefSeq:NP_190334.1 UniGene:At.519
IntAct:Q8LFV3 STRING:Q8LFV3 EnsemblPlants:AT3G47500.1 GeneID:823904
KEGG:ath:AT3G47500 GeneFarm:4398 TAIR:At3g47500 eggNOG:NOG295870
InParanoid:Q8LFV3 OMA:KDNETER PhylomeDB:Q8LFV3
ProtClustDB:CLSN2915701 Genevestigator:Q8LFV3 GermOnline:AT3G47500
Uniprot:Q8LFV3
Length = 448
Score = 241 (89.9 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 42/71 (59%), Positives = 51/71 (71%)
Query: 3 KKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGC 62
K K + P CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G
Sbjct: 101 KTLKKPTKILP-CPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGR 159
Query: 63 RKNGRAKSSRR 73
RKN + S R
Sbjct: 160 RKNKSSSSHYR 170
>TAIR|locus:2164860 [details] [associations]
symbol:CDF2 "cycling DOF factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000239772 EMBL:AB012243
EMBL:AY056804 EMBL:BT015791 IPI:IPI00544938 RefSeq:NP_568567.1
RefSeq:NP_851106.1 UniGene:At.26292 IntAct:Q93ZL5 STRING:Q93ZL5
PRIDE:Q93ZL5 EnsemblPlants:AT5G39660.1 EnsemblPlants:AT5G39660.2
GeneID:833962 KEGG:ath:AT5G39660 GeneFarm:4475 TAIR:At5g39660
eggNOG:NOG255195 InParanoid:Q93ZL5 OMA:ANFHESS PhylomeDB:Q93ZL5
ProtClustDB:CLSN2689899 Genevestigator:Q93ZL5 GermOnline:AT5G39660
Uniprot:Q93ZL5
Length = 457
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 48/97 (49%), Positives = 63/97 (64%)
Query: 6 KPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
KPD + P CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G RKN
Sbjct: 133 KPD-KILP-CPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKN 190
Query: 66 GRAKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGS 102
++ +S + +A TD + PNG +
Sbjct: 191 -KSPASHYNRHVSITSAEAMQKVARTD--LQHPNGAN 224
>TAIR|locus:2055506 [details] [associations]
symbol:AT2G34140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002341 EMBL:BT010496 EMBL:AK221308 IPI:IPI00538613
PIR:H84752 RefSeq:NP_180961.1 UniGene:At.43132
EnsemblPlants:AT2G34140.1 GeneID:817975 KEGG:ath:AT2G34140
GeneFarm:4463 TAIR:At2g34140 eggNOG:NOG326560 HOGENOM:HOG000090574
InParanoid:O22967 OMA:IACPRCK PhylomeDB:O22967
ProtClustDB:CLSN2679679 Genevestigator:O22967 GermOnline:AT2G34140
Uniprot:O22967
Length = 170
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 6 KPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
+PD A CPRC S TKFCY+NNY+++QPR+FCKGC RYWT GG+LRNVPVG G RK+
Sbjct: 53 RPDKIIA--CPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKS 110
>TAIR|locus:2154079 [details] [associations]
symbol:CDF1 "AT5G62430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048510 "regulation of timing of transition from
vegetative to reproductive phase" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009658 GO:GO:0048510 EMBL:AB015469
EMBL:AB231333 EMBL:AF446362 EMBL:AY143830 IPI:IPI00525269
IPI:IPI00529068 RefSeq:NP_201049.3 UniGene:At.9300 IntAct:Q8W1E3
STRING:Q8W1E3 EnsemblPlants:AT5G62430.1 GeneID:836364
KEGG:ath:AT5G62430 GeneFarm:4477 TAIR:At5g62430 eggNOG:NOG237530
HOGENOM:HOG000239772 InParanoid:Q8W1E3 KO:K16222 OMA:ARIENND
PhylomeDB:Q8W1E3 ProtClustDB:CLSN2920562 Genevestigator:Q8W1E3
GermOnline:AT5G62430 Uniprot:Q8W1E3
Length = 298
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 56/145 (38%), Positives = 82/145 (56%)
Query: 2 EKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
+K K + P CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++R+VP+G G
Sbjct: 44 DKTLKKPTKILP-CPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAG 102
Query: 62 CRKNGRAKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVV-FANSSTPDNVV 120
RKN K++ S +++ + T+ V + + G D ++ F N +
Sbjct: 103 RRKN---KNNSPTSHYHH------VTISETNGPVLSFSLGDDQKVSSNRFGNQKLVARIE 153
Query: 121 QNDDFNVHNVMGNGDLNILGEFPQV 145
ND+ + +N NG LN FP V
Sbjct: 154 NNDERSNNNT-SNG-LNC---FPGV 173
>TAIR|locus:2127353 [details] [associations]
symbol:DOF4.5 "DNA-binding with One Finger 4.5"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161554 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL021960
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 eggNOG:NOG279085
EMBL:AB493690 IPI:IPI00526819 PIR:T04939 RefSeq:NP_193840.1
UniGene:At.64194 DNASU:827855 EnsemblPlants:AT4G21080.1
GeneID:827855 KEGG:ath:AT4G21080 GeneFarm:4470 TAIR:At4g21080
OMA:ARMVSVE PhylomeDB:O49550 Genevestigator:O49550
GermOnline:AT4G21080 Uniprot:O49550
Length = 249
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 42/71 (59%), Positives = 47/71 (66%)
Query: 6 KPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
KP C RC S NTKFCYYNNY QPRYFCK CRRYWT GG+LRN+P+GG +
Sbjct: 18 KPPPPPPRVCARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGG----S 73
Query: 66 GRAKSSRRKSP 76
RAK +R P
Sbjct: 74 SRAKRARVNQP 84
>TAIR|locus:2133149 [details] [associations]
symbol:ATDOF4.2 "AT4G21030" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010214 "seed coat development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048359 "mucilage metabolic process involved seed coat
development" evidence=IMP] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:2000032 "regulation of secondary shoot formation"
evidence=IMP] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0048825 EMBL:AB493687 IPI:IPI00542373
PIR:T10645 RefSeq:NP_193835.1 UniGene:At.54449
EnsemblPlants:AT4G21030.1 GeneID:827850 KEGG:ath:AT4G21030
GeneFarm:4467 TAIR:At4g21030 eggNOG:NOG254967 HOGENOM:HOG000097076
OMA:QPRYKCK PhylomeDB:Q9SUB1 ProtClustDB:CLSN2685338
Genevestigator:Q9SUB1 GO:GO:0048359 GO:GO:2000032 Uniprot:Q9SUB1
Length = 194
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 32/55 (58%), Positives = 36/55 (65%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
CPRC S T+F Y+NN SQPRY CK C R WT GG LRN+PV G C K+ K
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDKSNLPK 77
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 245 245 0.00099 113 3 11 22 0.47 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 618 (66 KB)
Total size of DFA: 223 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.23u 0.12s 25.35t Elapsed: 00:00:01
Total cpu time: 25.24u 0.12s 25.36t Elapsed: 00:00:01
Start: Tue May 21 00:43:17 2013 End: Tue May 21 00:43:18 2013