BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025998
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 118/205 (57%), Gaps = 29/205 (14%)
Query: 1 MEKKWKPDVE----TAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNV 56
+ +KWK E TAP+CPRCAS NTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRN+
Sbjct: 22 IPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNI 81
Query: 57 PVGGGCRKNGRAK-SSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFA---- 111
PVGGGCRK R++ +S ++ N +RP + DD + GSDIDLA VFA
Sbjct: 82 PVGGGCRKRSRSRQNSHKRFGRNENRPDGLI---NQDDGFQSSPPGSDIDLAAVFAQYVT 138
Query: 112 --NSSTPDNVVQNDD-----FNVHNVMG---------NGDLNILGEFPQVFGQLQEEEDR 155
+ S+ DN +D H + + DL GEF + + +E+++
Sbjct: 139 DRSPSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNNLTQKTKEDQEV 198
Query: 156 RVQDFLEDDMVNAHGLQALLGDEIV 180
Q FL++D Q LL D+ +
Sbjct: 199 FGQ-FLQEDREEIFEFQGLLDDKEI 222
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 80/117 (68%), Gaps = 16/117 (13%)
Query: 5 WKPDV----ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 60
W+P+ E PSCPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 13 WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72
Query: 61 GCRKNGRAKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGS-DIDLAVVFANSSTP 116
GCRK+ R KSS NN + + +S P GGS IDLA+V+AN P
Sbjct: 73 GCRKSRRPKSSSG----NNTKTSLTANS-------GNPGGGSPSIDLALVYANFLNP 118
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Query: 10 ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
E A CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWTKGG+LRN+PVGGGCRKN R+
Sbjct: 52 ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111
Query: 70 SSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFA--NSSTPDNVVQNDDFNV 127
SS +S P + + + + IDL++ FA N P + Q
Sbjct: 112 SSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQ---LGF 168
Query: 128 HNVMGNGDLNILGEFPQVFGQLQEEED 154
H+ +G+ + + +FG Q++E+
Sbjct: 169 HSELGSSHQS---DMEGMFGTSQQKEN 192
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 12 APSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSS 71
A +CPRC SPNTKFCYYNNYSLSQPRYFCK CRRYWTKGG+LRNVPVGGGCR+N R+ SS
Sbjct: 47 AQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSS 106
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 58/66 (87%)
Query: 2 EKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
E+K +P+ + A +CPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWT+GGSLRN+PVGGG
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 62 CRKNGR 67
RKN R
Sbjct: 102 SRKNKR 107
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 106/216 (49%), Gaps = 48/216 (22%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRK 74
CPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWT+GGSLRNVPVGG RKN R+ S+
Sbjct: 76 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRS-STPLA 134
Query: 75 SPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHNVMGNG 134
SP N P D++ ++F+ S P+ N
Sbjct: 135 SPSNPKLP--------------------DLNPPILFS-SQIPNK-------------SNK 160
Query: 135 DLNILGEFPQVFGQLQEEEDRRVQDFLEDDMVNAHGLQALLGDEIVDHQVALWSDQAETE 194
DLN+L FP + ++ + L + V++ G+ L +++D L+S
Sbjct: 161 DLNLL-SFP-----VMQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLG-FP 213
Query: 195 TLPNFTWQRAMFQLQDFDSFPADDQLKASANLISDN 230
T+P++ Q + SF D N I+ N
Sbjct: 214 TMPDYK------QSNNNLSFSIDHHQGIGHNTINSN 243
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%)
Query: 2 EKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
E+K +P + A CPRC S NTKFCYYNNYS+SQPRYFCK CRRYWT GG+LRNVP+GGG
Sbjct: 49 ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108
Query: 62 CRKNGRA 68
CRKN A
Sbjct: 109 CRKNKHA 115
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 60/79 (75%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRK 74
CPRC S NTKFCYYNNY+LSQPR+FCK CRRYWTKGG LRNVPVGGGCRK R+K+ +
Sbjct: 53 CPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQVP 112
Query: 75 SPFNNDRPKASCSSDHTDD 93
S + D+P + H ++
Sbjct: 113 SSSSADKPTTTQDDHHVEE 131
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 50/54 (92%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRA 68
CPRC SPNTKFCYYNNYSLSQPR+FCK CRRYWT+GG+LRNVP+GGGCRK ++
Sbjct: 43 CPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKS 96
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 10 ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
E A CPRC S NTKFCY+NNYSL+QPR+FCK CRRYWT+GG+LRNVPVGGGCR+N R K
Sbjct: 86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Query: 7 PDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNG 66
P E A +CPRC S NTKFCY+NNYSL+QPR+FCK CRRYWT+GGSLRNVPVGGG R+N
Sbjct: 70 PLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNK 129
Query: 67 RAKSSRRKS 75
R+K SR KS
Sbjct: 130 RSK-SRSKS 137
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 53/61 (86%)
Query: 7 PDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNG 66
P ETA CPRC S NTKFCY+NNYSL+QPR+FCK CRRYWT+GG+LR+VPVGGGCR+N
Sbjct: 89 PLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNK 148
Query: 67 R 67
R
Sbjct: 149 R 149
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 52/61 (85%)
Query: 7 PDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNG 66
P + CPRC S NTKFCYYNNY+L+QPR+FCKGCRRYWT+GG+LRNVPVGGGCR+N
Sbjct: 71 PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130
Query: 67 R 67
+
Sbjct: 131 K 131
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 51/61 (83%)
Query: 3 KKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGC 62
++ +P + CPRC S +TKFCYYNNYSLSQPRYFCK CRRYWTKGG+LRN+PVGGGC
Sbjct: 63 RRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 122
Query: 63 R 63
R
Sbjct: 123 R 123
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 58/82 (70%), Gaps = 11/82 (13%)
Query: 2 EKKWKPDVETAP----SCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVP 57
EKK + T P +CPRC S NTKFCYYNNYSL+QPRY CK CRRYWT+GGSLRNVP
Sbjct: 53 EKKLMTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVP 112
Query: 58 VGGGCRKNGRAKSSRRKSPFNN 79
VGGG RKN +K PF N
Sbjct: 113 VGGGSRKN-------KKLPFPN 127
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRK 74
CPRC SPNTKFCYYNNY+LSQPR+FCK CRRYWTKGG+LRN+PVGGG RK+ + S
Sbjct: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPS 94
Query: 75 SPFNN 79
S N
Sbjct: 95 SNLKN 99
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%)
Query: 1 MEKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 60
+E+K +P+ + A +CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 37 VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96
Query: 61 GC 62
G
Sbjct: 97 GV 98
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 1 MEKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 60
+ K +P E A CPRC S NTKFCY+NNY+L+QPR+FCK CRRYWT+GG+LRNVPVGG
Sbjct: 83 LAKNSQPP-EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGG 141
Query: 61 GCRK 64
GCR+
Sbjct: 142 GCRR 145
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 10 ETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
E + CPRC S NTKFCYYNNYSLSQPRYFCK CRRYWTKGG LRN+P+GG RK+ R+
Sbjct: 37 EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSS 96
Query: 70 SSRR 73
S+ +
Sbjct: 97 SATK 100
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 48/51 (94%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
CPRC SPNTKFCYYNNY+LSQPR+FCK CRRYWTKGG+LRNVPVGGG RKN
Sbjct: 31 CPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Query: 2 EKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 60
E+K +P + +CPRC S NTKFCYYNNYSL+QPRYFCKGCRRYWT+GGSLRNVPVGG
Sbjct: 71 ERKARPQEKL--NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 48/55 (87%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
CPRC S NTKFCYYNNYSLSQPR+FCK C+RYWT+GG+LRNVPVGG RKN R K
Sbjct: 29 CPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVK 83
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 47/51 (92%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
CPRCAS +TKFCYYNNY+ SQPR+FCKGCRRYWTKGG+LRNVPVGGG RK
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKK 99
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 46/55 (83%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
CPRC S NTKFC+YNNYS SQPRYFCK CRRYWT GG+LRN+PVGG CRK R K
Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKRLK 80
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 49/65 (75%)
Query: 3 KKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGC 62
K+ P + CPRC S NTKFCYYNNYSLSQPR++CK CRRYWT+GG+LRNVP+GG
Sbjct: 31 KEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGST 90
Query: 63 RKNGR 67
R +
Sbjct: 91 RNKNK 95
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 49/58 (84%), Gaps = 2/58 (3%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSR 72
CPRC S NTKFCYYNNY+ SQPR+FCK CRRYWT GG+LR+VPVGGG RK+ AK SR
Sbjct: 32 CPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKS--AKRSR 87
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRR 73
CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G RKN + S R
Sbjct: 112 CPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYR 170
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 45/51 (88%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
CPRC S NTKFCYYNNY+++QPRYFC+ C+RYWT GGS+RNVPVG G RKN
Sbjct: 134 CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Query: 14 SCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRR 73
SCPRC S NTKFCYYNNY+ SQPR+FCK CRRYWT GG+LR++PVGG RK+ +K SR
Sbjct: 33 SCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS--SKRSRT 90
Query: 74 KS 75
S
Sbjct: 91 YS 92
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRK 74
C RC S NTKFCYYNNYS QPRYFCK CRRYWT GG+LRNVP+GG + RAK +R
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGG----SSRAKRTRIN 82
Query: 75 SP 76
P
Sbjct: 83 QP 84
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 44/51 (86%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G RKN
Sbjct: 140 CPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKN 190
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 46/55 (83%)
Query: 7 PDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
P++ CPRC S TKFCYYNNY+L+QPRY+CK CRRYWT+GG+LR+VPVGGG
Sbjct: 23 PNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGG 77
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 14 SCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
+CPRC S TKFCY+NNY+++QPR+FCKGC RYWT GG+LRNVPVG G RK+
Sbjct: 59 ACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKS 110
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
CPRC S +TKFCYYNNY+++QPR+FC+ C+RYWT GGS+R VPVG G RKN
Sbjct: 107 CPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKN 157
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++R+VP+G G RKN
Sbjct: 56 CPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKN 106
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 45/51 (88%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 65
CPRC S TKFCY+NNY+++QPR+FCKGC+RYWT GG+LRNVPVG G RK+
Sbjct: 64 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKS 114
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRK 74
C RC S NTKFCYYNNY QPRYFCK CRRYWT GG+LRN+P+GG RAK +R
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGS----SRAKRARVN 82
Query: 75 SP 76
P
Sbjct: 83 QP 84
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 36/55 (65%)
Query: 15 CPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
CPRC S T+F Y+NN SQPRY CK C R WT GG LRN+PV G C K+ K
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDKSNLPK 77
>sp|P80888|HCY_PALVU Hemocyanin OS=Palinurus vulgaris PE=1 SV=2
Length = 657
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 19/110 (17%)
Query: 32 SLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRKSPFNNDRPKASCSSDHT 91
+L + R+ C ++WTK G +N+ +SS+ S D P
Sbjct: 494 NLDEARWLCLELDKFWTKLGDGKNLI----------ERSSKDSSVTVPDMPSFESLKKQA 543
Query: 92 DDAVSTPNGGSDIDLAVVFANSSTPDNVV------QNDDFNVHNVMGNGD 135
D+AV NGG D+DL+ + PD ++ Q +FN++ + +GD
Sbjct: 544 DEAV---NGGHDLDLSAYERSCGIPDRMLLPKSKPQGMEFNLYVAVTDGD 590
>sp|P04254|HCYA_PANIN Hemocyanin A chain OS=Panulirus interruptus PE=1 SV=2
Length = 657
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 32 SLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRKSPFNNDRPKASCSSDHT 91
+L + R+FC +++ K VP G + +SS+ S D P +
Sbjct: 494 TLDEARWFCIELDKFFQK------VPKGPETIE----RSSKDSSVTVPDMPSFQSLKEQA 543
Query: 92 DDAVSTPNGGSDIDLAVVFANSSTPDNVV------QNDDFNVHNVMGNGDLNILGE 141
D+AV NGG D+DL+ + PD ++ + +FN++ + +GD + G
Sbjct: 544 DNAV---NGGHDLDLSAYERSCGIPDRMLLPKSKPEGMEFNLYVAVTDGDKDTEGH 596
>sp|Q8FWV9|BEPG_BRUSU Efflux pump membrane transporter BepG OS=Brucella suis biovar 1
(strain 1330) GN=bepG PE=1 SV=1
Length = 1074
Score = 31.6 bits (70), Expect = 4.7, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 79 NDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHNVMGNGDLNI 138
N PK S T A TP +ID + +P+N++Q + N + N
Sbjct: 708 NQNPK--LSRVFTTFATDTPQLNLNIDRQKALSLGVSPNNIIQALQSTLGGYFVN-NFNT 764
Query: 139 LGEFPQVFGQLQEEEDRRVQDFLEDDMVNAHG 170
LG QV Q ++++ + V+D ++ ++HG
Sbjct: 765 LGRTWQVIIQGEQQDRKTVEDIYRINVRSSHG 796
>sp|P10787|HCYB_PANIN Hemocyanin B chain OS=Panulirus interruptus PE=1 SV=1
Length = 657
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 32 SLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRKSPFNNDRPKASCSSDHT 91
+L + R+FC +++ K VP G + +SS+ S D P +
Sbjct: 494 TLDEARWFCIELDKFFQK------VPSGPETIE----RSSKDSSVTVPDMPSFQSLKEQA 543
Query: 92 DDAVSTPNGGSDIDLAVVFANSSTPDNVV------QNDDFNVHNVMGNGDLNILGE 141
D+AV NGG D+DL+ + PD ++ + FN++ + +GD + G
Sbjct: 544 DNAV---NGGHDLDLSAYERSCGIPDRMLLPKSKPEGMKFNLYVAVTDGDKDTEGH 596
>sp|A3LN78|MGR1_PICST Mitochondrial genome required protein 1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=MGR1 PE=3 SV=2
Length = 390
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 104 IDLAVVFANSSTPDNVVQNDDFNV----HNVMGNGDLNILGEFPQVFGQLQEEEDRRVQD 159
+D+++V ANSS PD+ + + +N+M +N G++ +++ +L+E R +
Sbjct: 222 LDVSIVQANSSNPDDKGHVEHVLIPVKKNNLMSQ--MNKKGKYVEIYNRLRESNKSRYRT 279
Query: 160 FLEDDMVNAHGL 171
L+ D+ + L
Sbjct: 280 LLDTDLKDVQEL 291
>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis GN=rnf111-b
PE=2 SV=1
Length = 959
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 93 DAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHNVMGNGDLNILGE 141
D + P+GG D D+ V+ A SSTP V N++ NV + ++ +GE
Sbjct: 262 DGTTLPSGGMDEDVVVIEA-SSTP-QVTANEEINVTSTDSEVEIVTVGE 308
>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis GN=rnf111
PE=2 SV=1
Length = 954
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 93 DAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHNVMGNGDLNILGE 141
D + P+GG D D+ V+ A SSTP V N++ NV + ++ +GE
Sbjct: 267 DGTTLPSGGMDEDVVVIEA-SSTP-QVTANEEINVTSTDSEVEIVTVGE 313
>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis
GN=rnf111-a PE=2 SV=1
Length = 923
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 93 DAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHNVMGNGDLNILGE 141
D + P+GG D D+ V+ A SSTP V N++ NV + ++ +GE
Sbjct: 228 DGTTLPSGGMDEDVVVIEA-SSTP-QVTANEEINVTSTDSEVEIVTVGE 274
>sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c
PE=2 SV=1
Length = 967
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 93 DAVSTPNGGSDIDLAVVFANSSTPDNVVQNDDFNVHNVMGNGDLNILGE 141
D + P+GG D D+ V+ A SSTP V N++ NV + ++ +GE
Sbjct: 267 DGTTLPSGGMDEDVVVIEA-SSTP-QVTANEEINVTSTDSEVEIVTVGE 313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,952,459
Number of Sequences: 539616
Number of extensions: 4429224
Number of successful extensions: 9464
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 9415
Number of HSP's gapped (non-prelim): 68
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)