BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026000
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SG80|ASD1_ARATH Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana GN=ASD1 PE=1
SV=1
Length = 678
Score = 330 bits (846), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/237 (67%), Positives = 191/237 (80%), Gaps = 8/237 (3%)
Query: 11 VLLLLFFIGTCFLFQCFA---AEVEVNQTARLLVDASQG--RPMPETLFGIFFEEINHAG 65
V +L F +G+CF++Q A+ + L VDAS G RP+PETLFGIFFEEINHAG
Sbjct: 12 VCVLSFLLGSCFVYQSLRVVDAQEDPKPAVTLQVDASNGGGRPIPETLFGIFFEEINHAG 71
Query: 66 AGGLWAELVSNRGFEAGGQNIPSNIDPWAIIGNDSSLIVSTDRSSCFERNKVALRMEVLC 125
AGGLWAELVSNRGFEAGGQN PSNI PW+I+G+ SS+ V+TDRSSCFERNK+ALRM+VLC
Sbjct: 72 AGGLWAELVSNRGFEAGGQNTPSNIWPWSIVGDHSSIYVATDRSSCFERNKIALRMDVLC 131
Query: 126 DSQGTNICPVGGVGVYNPGYWGMGIKQGKTYKVVFYIRSLGSVNILVSLTSSNGLQTLAT 185
DS+G CP GGVGVYNPGYWGM I++GK YKV Y+RS G +++ VSLTSSNG +TLA+
Sbjct: 132 DSKG---CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNGSRTLAS 188
Query: 186 SNIIASASDVSNWTRVETLLEAKETNPNARLQLTTSRKGVIWFDQVSAMPLDTYKDY 242
IIASASDVS W + E LLEAK T+P+ARLQLTT++KG IW DQVSAMP+DT+K +
Sbjct: 189 EKIIASASDVSKWIKKEVLLEAKATDPSARLQLTTTKKGSIWIDQVSAMPVDTHKGH 245
>sp|Q8VZR2|ASD2_ARATH Alpha-L-arabinofuranosidase 2 OS=Arabidopsis thaliana GN=ASD2 PE=2
SV=1
Length = 674
Score = 314 bits (805), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/235 (66%), Positives = 185/235 (78%), Gaps = 6/235 (2%)
Query: 11 VLLLLFFIGTCFLFQCFA-AEVEVNQTARLLVDASQ--GRPMPETLFGIFFEEINHAGAG 67
V LL F +G+ ++Q + + + L VDAS RP+PETLFGIFFEEINHAGAG
Sbjct: 13 VCLLSFILGSFSVYQTLCLVDAQEDAIVTLQVDASNVTRRPIPETLFGIFFEEINHAGAG 72
Query: 68 GLWAELVSNRGFEAGGQNIPSNIDPWAIIGNDSSLIVSTDRSSCFERNKVALRMEVLCDS 127
GLWAELVSNRGFEAGGQ IPSNI PW+IIG++SS+ V TDRSSCFERNK+ALRMEVLCDS
Sbjct: 73 GLWAELVSNRGFEAGGQIIPSNIWPWSIIGDESSIYVVTDRSSCFERNKIALRMEVLCDS 132
Query: 128 QGTNICPVGGVGVYNPGYWGMGIKQGKTYKVVFYIRSLGSVNILVSLTSSNGLQTLATSN 187
N CP+GGVGVYNPGYWGM I++GK YKVV Y+RS G +++ VS TSSNG TLA+ N
Sbjct: 133 ---NSCPLGGVGVYNPGYWGMNIEEGKKYKVVLYVRSTGDIDVSVSFTSSNGSVTLASEN 189
Query: 188 IIASASDVSNWTRVETLLEAKETNPNARLQLTTSRKGVIWFDQVSAMPLDTYKDY 242
IIA ASD+ NWT+ E LLEA T+ ARLQ TT++KG IWFDQVSAMP+DTYK +
Sbjct: 190 IIALASDLLNWTKKEMLLEANGTDNGARLQFTTTKKGSIWFDQVSAMPMDTYKGH 244
>sp|P82593|ABF1_STRCX Alpha-N-arabinofuranosidase 1 OS=Streptomyces chartreusis PE=1 SV=1
Length = 825
Score = 70.5 bits (171), Expect = 1e-11, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 43 ASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPS--NIDPWAIIGNDS 100
A++G + +T++G+FFE+IN A GGL+AELV NR FE + S + W + G
Sbjct: 42 AAKGAAIDDTMYGVFFEDINRAADGGLYAELVQNRSFEYSTDDNRSYTPLTSWIVDGTGE 101
Query: 101 SLIVSTDRSSCFERNKVALRMEVLCDSQGTNICPVGGVGVYNPGY-WGMGIKQGKTYKVV 159
V D ERN+ L + G V N GY G+ ++QGK Y
Sbjct: 102 ---VVNDAGRLNERNRNYLSLG-------------AGSSVTNAGYNTGIRVEQGKRYDFS 145
Query: 160 FYIRSLGSVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLEAKETNPNARLQLT 219
+ R+ + + V+L + G TLAT+ +A W + A T+ RL +
Sbjct: 146 VWARAGSASTLTVALKDAAG--TLATARQVAVE---GGWAKYRATFTATRTSNRGRLAVA 200
Query: 220 TSRKGVIWFDQVSAMPLDTYKD 241
+ + D VS P DTY++
Sbjct: 201 ANDAAAL--DMVSLFPRDTYRN 220
>sp|Q2U790|ABFA_ASPOR Probable alpha-N-arabinofuranosidase A OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=abfA PE=3 SV=2
Length = 629
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 39 LLVDASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNIDPWAIIGN 98
L V +G L+G FE+INH+G GG++ +L+ N G Q + WA +G
Sbjct: 28 LEVSTEKGNSSSPILYGFMFEDINHSGDGGIYGQLLRNNGL----QGSKPGLTAWAAVG- 82
Query: 99 DSSLIVSTDRSSCFERNKVALRMEVLCDSQGTNICPVGGVGVYNPGYWGMGIKQGKTYKV 158
D+++ V ++ E +L+++V QG + G VG N GYWG+ + G +
Sbjct: 83 DATIAVDA-QNPLTEAIPHSLKLDV---KQGAS----GAVGFTNEGYWGVPV-DGSEFLN 133
Query: 159 VFYIRSLGSVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLEAKETNPNARL 216
F+I+ S +I V L +N T S I+ +S+ SN+T+V + K+ A L
Sbjct: 134 TFWIKGNFSGDITVRLVGNN-TGTEYGSTKISQSSNSSNFTKVLAKIPTKKAPDGAVL 190
>sp|B8NKA3|ABFA_ASPFN Probable alpha-N-arabinofuranosidase A OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=abfA PE=3 SV=2
Length = 629
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 39 LLVDASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNIDPWAIIGN 98
L V +G L+G FE+INH+G GG++ +L+ N G Q + WA +G
Sbjct: 28 LEVSTEKGNSSSPILYGFMFEDINHSGDGGIYGQLLRNNGL----QGSKPGLTAWAAVG- 82
Query: 99 DSSLIVSTDRSSCFERNKVALRMEVLCDSQGTNICPVGGVGVYNPGYWGMGIKQGKTYKV 158
D+++ V ++ E +L+++V QG + G VG N GYWG+ + G +
Sbjct: 83 DATIAVDA-QNPLTEAIPHSLKLDV---KQGAS----GAVGFTNEGYWGVPV-DGSEFLN 133
Query: 159 VFYIRSLGSVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLEAKETNPNARL 216
F+I+ S +I V L +N T S I+ +S+ SN+T+V + K+ A L
Sbjct: 134 TFWIKGNFSGDITVRLVGNN-TGTEYGSTKISQSSNSSNFTKVLAKIPTKKAPDGAVL 190
>sp|Q8NK90|ABFA_ASPKW Alpha-N-arabinofuranosidase A OS=Aspergillus kawachii (strain NBRC
4308) GN=abfA PE=1 SV=2
Length = 628
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 31 VEVNQTARLLVDASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNI 90
V+ L V G L+G FE+INH+G GG++ +L+ N G Q N+
Sbjct: 20 VQHAHGVSLKVSTQGGNSSSPILYGFMFEDINHSGDGGIYGQLLQNPGL----QGTTPNL 75
Query: 91 DPWAIIGNDSSLIVSTDRSSCFERNKVALRMEVLCDSQGTNICPVGGVGVYNPGYWGMGI 150
WA +G D+++ + D S ++++V D+ G VG+ N GYWG+ +
Sbjct: 76 TAWAAVG-DATIAIDGD-SPLTSAIPSTIKLDVADDA-------TGAVGLTNEGYWGIPV 126
Query: 151 KQGKTYKVVFYIRSLGSVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLE-AKE 209
G ++ F+I+ S +I V L N T S I S N+T+ K
Sbjct: 127 -DGSEFQSSFWIKGDYSGDITVRLV-GNYTGTEYGSATITHTSTADNFTQASVKFPTTKA 184
Query: 210 TNPNARLQLT 219
+ N +LT
Sbjct: 185 PDGNVLYELT 194
>sp|Q96X54|ABFA_ASPAW Probable alpha-N-arabinofuranosidase A OS=Aspergillus awamori
GN=abfA PE=1 SV=1
Length = 628
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 31 VEVNQTARLLVDASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNI 90
V+ L V G L+G FE+INH+G GG++ +L+ N G Q N+
Sbjct: 20 VQHAHGVSLKVSTQGGNSSSPILYGFMFEDINHSGDGGIYGQLLQNPGL----QGTTPNL 75
Query: 91 DPWAIIGNDSSLIVSTDRSSCFERNKVALRMEVLCDSQGTNICPVGGVGVYNPGYWGMGI 150
WA +G D+++ + D S ++++V D+ G VG+ N GYWG+ +
Sbjct: 76 TAWAAVG-DATIAIDGD-SPLTSAIPSTIKLDVADDA-------TGAVGLTNEGYWGIPV 126
Query: 151 KQGKTYKVVFYIRSLGSVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLE-AKE 209
G ++ F+I+ S +I V L N T S I S N+T+ K
Sbjct: 127 -DGSEFQSSFWIKGDYSGDITVRLV-GNYTGTEYGSATITHTSTADNFTQASVKFPTTKA 184
Query: 210 TNPNARLQLT 219
+ N +LT
Sbjct: 185 PDGNVLYELT 194
>sp|Q0CTV2|ABFA_ASPTN Probable alpha-N-arabinofuranosidase A OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=abfA PE=3 SV=1
Length = 628
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 1 MASCKVPSCGVLLLLFFIGTCFLFQCFAAEVEVNQTARLLVDASQGRPMPETLFGIFFEE 60
+A + G L LLF I +E L V G L+G FE+
Sbjct: 2 VAFSTISGLGALSLLFSI------------IESVDGVSLKVSTDGGNSSSPLLYGFMFED 49
Query: 61 INHAGAGGLWAELVSNRGFEAGGQNIPSNIDPWAIIGNDSSLIVSTDRSSCFERNKVALR 120
INH+G GG++ +++ N G + N+ + WA +G+ + + +T+ + N +L+
Sbjct: 50 INHSGDGGIYGQMIQNNGLQGSSPNLTA----WASVGDGTISVDTTNPLTAAIPN--SLK 103
Query: 121 MEVLCDSQGTNICPVGGVGVYNPGYWGMGIKQGKTYKVVFYIRSLGSVNILVSLTSSNGL 180
+++ D+ G VG N GYWG+ + G ++ F+++ S I V L N
Sbjct: 104 LDIKPDA-------TGAVGFTNEGYWGIPV-DGTEFQNSFWMKGDFSGEITVRLV-GNET 154
Query: 181 QTLATSNIIASASDVSNWTRVETLLE-AKETNPNARLQLT 219
T S +S ++T+V K + N +LT
Sbjct: 155 GTEYGSTTFNQSSSSDDYTKVSVKFPTTKAPDGNVLYELT 194
>sp|P42254|ABFA_ASPNG Alpha-N-arabinofuranosidase A OS=Aspergillus niger GN=abfA PE=1
SV=1
Length = 628
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 39 LLVDASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNIDPWAIIGN 98
L V G L+G FE+INH+G GG++ +++ N G Q N+ WA +G
Sbjct: 28 LKVSTQGGNSSSPILYGFMFEDINHSGDGGIYGQMLQNPGL----QGTAPNLTAWAAVG- 82
Query: 99 DSSLIVSTDRSSCFERNKVALRMEVLCDSQGTNICPVGGVGVYNPGYWGMGIKQGKTYKV 158
D+++ + D S +++ + D+ G VG+ N GYWG+ + G +
Sbjct: 83 DATIAIDGD-SPLTSAIPSTIKLNIADDA-------TGAVGLTNEGYWGIPV-DGSEFHS 133
Query: 159 VFYIRSLGSVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLE-AKETNPNARLQ 217
F+I+ S +I V L N T S I S N+T+ K + N +
Sbjct: 134 SFWIKGDYSGDITVRLV-GNYTGTEYGSTTITHTSTADNFTQASVKFPTTKAPDGNVLYE 192
Query: 218 LT 219
LT
Sbjct: 193 LT 194
>sp|A2Q7E0|ABFA_ASPNC Probable alpha-N-arabinofuranosidase A OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=abfA PE=3 SV=1
Length = 628
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 39 LLVDASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNIDPWAIIGN 98
L V G L+G FE+INH+G GG++ +++ N G Q N+ WA +G
Sbjct: 28 LKVSTQGGNSSSPILYGFMFEDINHSGDGGIYGQMLQNPGL----QGTAPNLTAWAAVG- 82
Query: 99 DSSLIVSTDRSSCFERNKVALRMEVLCDSQGTNICPVGGVGVYNPGYWGMGIKQGKTYKV 158
D+++ + D S +++ + D+ G VG+ N GYWG+ + G +
Sbjct: 83 DATIAIDGD-SPLTSAIPSTIKLNIADDA-------TGAVGLTNEGYWGIPV-DGSEFHS 133
Query: 159 VFYIRSLGSVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLE-AKETNPNARLQ 217
F+I+ S +I V L N T S I S N+T+ K + N +
Sbjct: 134 SFWIKGDYSGDITVRLV-GNYTGTEYGSTTITHTSTADNFTQASVKFPTTKAPDGNVLYE 192
Query: 218 LT 219
LT
Sbjct: 193 LT 194
>sp|A6VQT2|DCUP_ACTSZ Uroporphyrinogen decarboxylase OS=Actinobacillus succinogenes
(strain ATCC 55618 / 130Z) GN=hemE PE=3 SV=1
Length = 354
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 40 LVDASQGRPMPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNI-DPWAIIGN 98
L+ + GR +P TLF GGLW E ++N G +A G + N+ + A IG+
Sbjct: 234 LIRENDGRKVPITLF---------TKGGGLWLEQIANSGCDAVGVDWTVNLAEAKAKIGH 284
Query: 99 DSSLIVSTDRSSCFERNKVALRMEV 123
+L + D S + R +R EV
Sbjct: 285 KVALQGNMDPSVLYAR-PARIRQEV 308
>sp|P51584|XYNY_CLOTM Endo-1,4-beta-xylanase Y OS=Clostridium thermocellum GN=xynY PE=1
SV=1
Length = 1077
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 35/188 (18%)
Query: 53 LFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNIPSNIDPWAIIGNDSSLIVSTDRSSCF 112
L G+FF + + L+A+ +E N D W +G D+ L +
Sbjct: 16 LLGVFF--VLPSNISQLYAD------YEVVHDTFEVNFDGWCNLGVDTYLTAVEN----- 62
Query: 113 ERNKVALRMEVLCDSQGTNICPVGGVGVYNPGYWGMGIKQGKTYKVVFYIRSLG------ 166
E N M V+ S ++ G Y+ G + G YK +++ G
Sbjct: 63 EGNNGTRGMMVINRSSASD-------GAYSEK--GFYLDGGVEYKYSVFVKHNGTGTETF 113
Query: 167 --SVNILVSLTSSNGLQTLATSNIIASASDVSNWTRVETLLEAKETNPNARLQLTTSRKG 224
SV+ L S T + +AT +++A WT + +A +T N L +TT
Sbjct: 114 KLSVSYLDSETEEENKEVIATKDVVAG-----EWTEISAKYKAPKTAVNITLSITTDSTV 168
Query: 225 VIWFDQVS 232
FD V+
Sbjct: 169 DFIFDDVT 176
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,111,934
Number of Sequences: 539616
Number of extensions: 3484443
Number of successful extensions: 6993
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6969
Number of HSP's gapped (non-prelim): 20
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)