BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026004
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13597|ICAM1_MOUSE Intercellular adhesion molecule 1 OS=Mus musculus GN=Icam1 PE=1
SV=1
Length = 537
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 24/195 (12%)
Query: 1 MDDEDSWPDFTLAEIKEMESM--YKEIGEASLTQEYCKALATSFSFSASRAARPAITWLQ 58
++ +W F L+EI E S ++ G Q A T +SF S RP W Q
Sbjct: 69 LESGPNWKLFELSEIGEDSSPLCFENCGTV---QSSASATITVYSFPESVELRPLPAWQQ 125
Query: 59 VQSWFRDKQKKSQAKSKSSSKDLKLFIDLCGESISSNEPEMSDKPIGSRISELKELAFEA 118
V +D + + L + L GE I +S +P+G + KE+ F
Sbjct: 126 VG---KDLTLRCHVDGGAPRTQLSAVL-LRGEEI------LSRQPVGGHPKDPKEITFTV 175
Query: 119 RSSKDDAWYDVASFLTYRVTCAGELEVRVRFSGFNNTEDEWVNVKTAVRQRSIP-LEQSE 177
+S+ D A+F +C EL++R + + E +++T +IP L+ +
Sbjct: 176 LASRGDHG---ANF-----SCRTELDLRPQGLALFSNVSEARSLRTFDLPATIPKLDTPD 227
Query: 178 CVKVNVGDLVLCYQE 192
++V + C E
Sbjct: 228 LLEVGTQQKLFCSLE 242
>sp|Q1L6Q1|DUSTY_APIME Dual serine/threonine and tyrosine protein kinase OS=Apis mellifera
GN=DSTYK PE=2 SV=1
Length = 969
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 104 IGSRISELKELAFEARSSKDDAWYDVASF-LTYRVTCAGELEVRVRFSGFNNTEDEWVNV 162
+GS + +A E S D+ DV +F + + CAG + + F F+N E W +V
Sbjct: 789 LGSIVGTPVHMAPELLSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSV 848
Query: 163 KTA-----VRQRSIPLEQSEC 178
K A +R +P EC
Sbjct: 849 KKALMIVGIRPERLPSFDDEC 869
>sp|Q5VZK9|LR16A_HUMAN Leucine-rich repeat-containing protein 16A OS=Homo sapiens
GN=LRRC16A PE=1 SV=1
Length = 1371
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 20/106 (18%)
Query: 30 LTQEYCKALATSFSFSASRAARPAITWLQVQSWFRDKQKKSQAKSKSSSKDLKLFIDLCG 89
LTQ+ + FS R P I L+ WF +K SSKDLKL D+C
Sbjct: 187 LTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWF----------TKLSSKDLKLSTDVCE 236
Query: 90 ESISSNEPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASFLTY 135
+ + + SR + L+EL E + D +AS L +
Sbjct: 237 QILR----------VVSRSNRLEELVLENAGLRTDFAQKLASALAH 272
>sp|A1S6D3|AROA_SHEAM 3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=aroA PE=3
SV=1
Length = 428
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 88 CGESISSNEPEMSDKPIGSRISELKELAFEARSSKDDAW 126
GE + EP M ++PIG + L++L + R K+D +
Sbjct: 110 TGEFTLTGEPRMEERPIGDLVDALRQLGADIRYLKNDGF 148
>sp|Q4VSN2|DUSTY_TAKRU Dual serine/threonine and tyrosine protein kinase OS=Takifugu
rubripes GN=dstyk PE=2 SV=1
Length = 921
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 96 EPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASF-LTYRVTCAGELEVRVRFSGFNN 154
E MS +G+ I +A E + K D DV +F + + CAG +++ F ++
Sbjct: 795 EAMMSGSIVGTPI----HMAPELFTGKYDNSVDVYAFGILFWYLCAGSVKLPEAFEKCSS 850
Query: 155 TEDEWVNVKTAVRQRSIPLEQSEC 178
+ W NVK R +P EC
Sbjct: 851 KDQLWNNVKKGARPERLPCFDEEC 874
>sp|Q6XUX0|DUSTY_CHICK Dual serine/threonine and tyrosine protein kinase OS=Gallus gallus
GN=DSTYK PE=2 SV=1
Length = 930
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 96 EPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASF-LTYRVTCAGELEVRVRFSGFNN 154
E MS +G+ I +A E + K D DV +F + + C+G +++ F +
Sbjct: 803 EAMMSGSIVGTPI----HMAPELFTGKYDNSVDVYAFGILFWYICSGHVKLPEAFERCAS 858
Query: 155 TEDEWVNVKTAVRQRSIPLEQSEC 178
+ W NV+ VR +P+ EC
Sbjct: 859 KDHLWNNVRRGVRPERLPVFDEEC 882
>sp|Q4VSN1|DUSTY_DANRE Dual serine/threonine and tyrosine protein kinase OS=Danio rerio
GN=dstyk PE=2 SV=1
Length = 885
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 96 EPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASF-LTYRVTCAGELEVRVRFSGFNN 154
E MS +G+ I +A E + K D DV +F + + C+G +++ F +
Sbjct: 764 EAMMSGSIVGTPI----HMAPELFTGKYDNSVDVYAFGILFWYLCSGSVKLPEAFEKCAS 819
Query: 155 TEDEWVNVKTAVRQRSIPLEQSEC 178
+ W NVK R +P+ EC
Sbjct: 820 KDQLWTNVKKGCRPERLPVFDEEC 843
>sp|Q6EDY6|LR16A_MOUSE Leucine-rich repeat-containing protein 16A OS=Mus musculus
GN=Lrrc16a PE=1 SV=2
Length = 1374
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 20/106 (18%)
Query: 30 LTQEYCKALATSFSFSASRAARPAITWLQVQSWFRDKQKKSQAKSKSSSKDLKLFIDLCG 89
LTQ+ + FS R P I L+ WF +K SSKDLKL D+C
Sbjct: 187 LTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWF----------TKLSSKDLKLSTDVCE 236
Query: 90 ESISSNEPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASFLTY 135
+ + + SR + L+EL E + D +A L +
Sbjct: 237 QILR----------VVSRSNRLEELVLENAGLRIDFAQKLAGALAH 272
>sp|B1KF47|AROA_SHEWM 3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella woodyi
(strain ATCC 51908 / MS32) GN=aroA PE=3 SV=1
Length = 426
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 89 GESISSNEPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASFLTYRVTC--AGELEV 145
GE I + EP M ++PIG + L++L E K + + LT T AG++E+
Sbjct: 111 GEFILTGEPRMEERPIGDLVDALRQLGAEVTYLKSEGFPP----LTINATGLNAGDVEI 165
>sp|Q4VSN3|DUSTY_TETNG Dual serine/threonine and tyrosine protein kinase OS=Tetraodon
nigroviridis GN=dstyk PE=2 SV=1
Length = 922
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 96 EPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASF-LTYRVTCAGELEVRVRFSGFNN 154
E MS +G+ I +A E + K D DV +F + + CAG +++ F ++
Sbjct: 795 EAMMSGSIVGTPI----HMAPELFTGKYDNSVDVYAFGILFWYLCAGSVKLPEAFEKCSS 850
Query: 155 TEDEWVNVKTAVRQRSIPLEQSEC 178
+ W NV+ R +P EC
Sbjct: 851 KDQLWNNVRKGARPERLPCFDEEC 874
>sp|Q6XUX2|DUSTY_RAT Dual serine/threonine and tyrosine protein kinase OS=Rattus
norvegicus GN=Dstyk PE=2 SV=1
Length = 927
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 96 EPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASF-LTYRVTCAGELEVRVRFSGFNN 154
E MS +G+ I +A E + K D DV +F + + C+G +++ F +
Sbjct: 800 EAMMSGSIVGTPI----HMAPELFTGKYDNSVDVYAFGILFWYICSGSIKLPEAFERCAS 855
Query: 155 TEDEWVNVKTAVRQRSIPLEQSEC 178
+ W NV+ R +P+ EC
Sbjct: 856 KDHLWNNVRRGTRPERLPVFDEEC 879
>sp|Q6XUX1|DUSTY_MOUSE Dual serine/threonine and tyrosine protein kinase OS=Mus musculus
GN=Dstyk PE=1 SV=1
Length = 927
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 96 EPEMSDKPIGSRISELKELAFEARSSKDDAWYDVASF-LTYRVTCAGELEVRVRFSGFNN 154
E MS +G+ I +A E + K D DV +F + + C+G +++ F +
Sbjct: 800 EAMMSGSIVGTPI----HMAPELFTGKYDNSVDVYAFGILFWYICSGSIKLPEAFERCAS 855
Query: 155 TEDEWVNVKTAVRQRSIPLEQSEC 178
+ W NV+ R +P+ EC
Sbjct: 856 KDHLWNNVRRGTRPERLPVFDEEC 879
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,017,342
Number of Sequences: 539616
Number of extensions: 3033330
Number of successful extensions: 9166
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 9156
Number of HSP's gapped (non-prelim): 20
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)