Query 026008
Match_columns 245
No_of_seqs 131 out of 426
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 02:37:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03155 Alg6_Alg8: ALG6, ALG8 100.0 2.4E-83 5.3E-88 615.4 20.4 229 16-244 2-250 (469)
2 KOG2575 Glucosyltransferase - 100.0 2.8E-76 6.2E-81 549.8 19.4 231 14-244 37-285 (510)
3 KOG2576 Glucosyltransferase - 100.0 3.1E-76 6.7E-81 548.6 14.1 239 5-244 1-250 (500)
4 TIGR03459 crt_membr carotene b 99.4 4.8E-11 1E-15 115.4 21.8 168 20-204 87-269 (470)
5 PF09594 DUF2029: Protein of u 98.7 1.2E-06 2.7E-11 75.5 15.7 115 62-198 2-121 (241)
6 COG5542 Predicted integral mem 98.7 2E-07 4.3E-12 88.9 11.5 182 28-237 62-248 (420)
7 PF13231 PMT_2: Dolichyl-phosp 98.5 1.1E-05 2.4E-10 64.9 17.0 149 62-236 1-157 (159)
8 COG5650 Predicted integral mem 98.3 4.3E-07 9.4E-12 88.8 4.9 188 31-237 103-293 (536)
9 COG1807 ArnT 4-amino-4-deoxy-L 97.9 0.0022 4.7E-08 62.9 20.6 170 8-201 7-192 (535)
10 PF02366 PMT: Dolichyl-phospha 97.8 0.00027 6E-09 62.2 11.7 96 98-194 80-189 (245)
11 PLN02841 GPI mannosyltransfera 97.8 0.00063 1.4E-08 66.1 14.8 159 13-201 11-184 (440)
12 PF06728 PIG-U: GPI transamida 97.6 0.0053 1.1E-07 58.5 16.9 127 61-203 56-195 (382)
13 PF05208 ALG3: ALG3 protein; 97.5 0.0005 1.1E-08 65.3 9.3 77 154-237 130-206 (368)
14 PRK13375 pimE mannosyltransfer 97.5 0.027 5.8E-07 54.5 20.4 187 10-233 20-221 (409)
15 KOG3893 Mannosyltransferase [C 97.4 0.00079 1.7E-08 63.1 8.6 132 103-236 98-238 (405)
16 PF05007 Mannosyl_trans: Manno 97.2 0.0013 2.7E-08 60.0 7.7 80 154-233 8-91 (259)
17 PRK13279 arnT 4-amino-4-deoxy- 97.1 0.093 2E-06 52.6 20.5 151 61-237 60-225 (552)
18 PF10131 PTPS_related: 6-pyruv 96.9 0.077 1.7E-06 53.8 18.4 121 63-202 4-135 (616)
19 PF09852 DUF2079: Predicted me 96.2 0.19 4.2E-06 48.6 15.0 88 117-204 76-165 (449)
20 KOG2762 Mannosyltransferase [C 96.1 0.014 3E-07 55.6 6.6 76 155-237 159-234 (429)
21 PF04188 Mannosyl_trans2: Mann 96.0 0.24 5.2E-06 48.2 14.9 108 128-237 142-250 (443)
22 TIGR03663 conserved hypothetic 95.8 1.1 2.3E-05 43.7 18.2 95 101-197 71-173 (439)
23 PF14897 EpsG: EpsG family 95.5 0.8 1.7E-05 41.0 15.3 140 30-200 22-161 (330)
24 TIGR03766 conserved hypothetic 95.5 0.38 8.3E-06 47.2 14.0 124 102-233 141-282 (483)
25 KOG3359 Dolichyl-phosphate-man 95.0 1.4 3E-05 45.6 16.4 146 50-204 71-238 (723)
26 PF09913 DUF2142: Predicted me 94.5 3.1 6.8E-05 39.0 16.7 117 63-196 95-220 (389)
27 COG1928 PMT1 Dolichyl-phosphat 93.9 1.2 2.7E-05 45.8 13.3 142 51-200 61-222 (699)
28 PF14264 Glucos_trans_II: Gluc 89.9 15 0.00032 33.4 14.7 90 116-207 62-161 (319)
29 COG3463 Predicted membrane pro 87.9 23 0.0005 34.9 14.6 86 118-203 105-192 (458)
30 COG1287 Uncharacterized membra 87.7 28 0.00062 36.3 16.3 111 58-187 80-208 (773)
31 PF03901 Glyco_transf_22: Alg9 87.0 28 0.00061 33.0 18.3 102 100-202 81-195 (418)
32 KOG2647 Predicted Dolichyl-pho 78.5 11 0.00025 36.8 8.3 107 128-237 155-264 (444)
33 PF09586 YfhO: Bacterial membr 75.7 1E+02 0.0023 31.9 18.9 188 29-237 27-236 (843)
34 PF02516 STT3: Oligosaccharyl 75.6 74 0.0016 30.5 13.2 86 61-161 68-160 (483)
35 COG4346 Predicted membrane-bou 69.3 57 0.0012 31.6 10.4 60 131-197 187-252 (438)
36 PHA01514 O-antigen conversion 68.9 1.3E+02 0.0028 30.1 20.5 157 4-197 5-173 (485)
37 PF11028 DUF2723: Protein of u 54.5 1.4E+02 0.003 25.7 12.9 59 146-204 95-169 (178)
38 PF10067 DUF2306: Predicted me 50.8 22 0.00047 27.6 3.6 16 29-44 64-79 (103)
39 KOG2515 Mannosyltransferase [C 39.2 4.3E+02 0.0093 26.8 14.3 148 34-201 39-198 (568)
40 COG5305 Predicted membrane pro 33.7 5.3E+02 0.012 26.3 14.8 132 98-237 114-261 (552)
41 cd07912 Tweety_N N-terminal do 28.3 1.7E+02 0.0037 28.7 6.5 37 172-209 33-69 (418)
42 PF07281 INSIG: Insulin-induce 26.8 4.3E+02 0.0093 23.0 8.5 93 63-164 46-139 (193)
43 PHA03235 DNA packaging protein 25.4 1.2E+02 0.0027 29.0 5.0 22 215-236 240-261 (409)
44 PHA03234 DNA packaging protein 24.3 73 0.0016 29.6 3.1 24 213-236 231-254 (338)
45 PF12911 OppC_N: N-terminal TM 20.9 1.3E+02 0.0029 20.0 3.1 24 214-237 16-39 (56)
No 1
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=100.00 E-value=2.4e-83 Score=615.42 Aligned_cols=229 Identities=47% Similarity=0.847 Sum_probs=211.5
Q ss_pred HHHHHHHH--HhccccC------CchhHhhhHHHHhccCCccccccccccc---ccCCCCchHHHHHHHHhhhhhc-cCC
Q 026008 16 IAVCVKLL--LIPAYHS------TDFEVHRHWLALTHSLPLSNWYADETSP---WTLDYPPFFACFERFLSIFAHY-IDP 83 (245)
Q Consensus 16 ~~~~~k~l--l~p~y~s------~DfE~~R~WmeiT~~lp~~~WY~~~~s~---W~lDYPPl~ay~~~l~g~ia~~-~~p 83 (245)
+++++|++ |.|.|+| |||||||||||||+|||++|||+|+||+ |||||||+||||||++||+|++ +||
T Consensus 2 ~~~~~r~~v~l~p~s~~~~ppm~gDfEaqRhWmeiT~~LP~~~WY~~~t~~l~yW~LDYPPl~Ay~~~~lg~~a~~~~~p 81 (469)
T PF03155_consen 2 IATLLRLLVSLGPYSGSGTPPMYGDFEAQRHWMEITHNLPISEWYFNDTSNLQYWGLDYPPLFAYFSWLLGKIAHFFIDP 81 (469)
T ss_pred ceeHHHHHHHcCCcccCCCCCCCCcHHHHHHHHHHHccCCHHHHHhcCCCccCcCcCCCCchHHHHHHHHHhhccccCCc
Confidence 46899999 9999999 9999999999999999999999999665 9999999999999999999999 899
Q ss_pred cceeeccCCccCCcchhhhHHHHHHHHHHHHHHH-HHHHHhcc------chhhHHHHHHHHHHhhhhhhccccchhhhhH
Q 026008 84 QIVDLHNGLNYRANSAIYFLRISVILSDLWLLYG-VYRLTKNA------DVKRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (245)
Q Consensus 84 ~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~-~~~~~~~~------~~~~~~~~~~~~llnP~liliDh~HFQyN~~ 156 (245)
+|+++.+||||||+++|+|||.|||++|++++++ ++.+++.. +++++.+..+++++|||+|+||||||||||+
T Consensus 82 ~~~~l~~s~g~~s~~~~~f~R~tVi~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~PgLilIDH~HFQYN~~ 161 (469)
T PF03155_consen 82 EWVALVSSRGYESPSHKLFMRLTVIVSDLLLYIPAVLFFCKSSGRSRNQSSKQRFIALLLILLNPGLILIDHGHFQYNGF 161 (469)
T ss_pred hhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHCchHHhhhhhhhhHHHH
Confidence 9999999999999999999999999999999775 77776643 3445667788889999999999999999999
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHHHHHHH
Q 026008 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGL-VRGFSRLSVLGAVVVAVFAAAYGPF 235 (245)
Q Consensus 157 ~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~-~~~~~~l~~lg~~vi~tf~l~f~PF 235 (245)
|+|++++|++++.+||+++||++|+++||+|||+||+||++|+|+||+|..++. ..+++|++++|++|++||+++|+||
T Consensus 162 ~lGl~l~si~~~~~~~~l~~a~~F~~~Ln~Kqm~LY~Ap~~f~yLL~~c~~~~~~~~~~~~~~~lg~~Vi~~f~~~~~PF 241 (469)
T PF03155_consen 162 LLGLLLLSIAALIRGRYLLGAILFSLLLNFKQMFLYYAPAFFVYLLGSCFQRKSFRFSIKRLIKLGIVVIATFALSFGPF 241 (469)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999544432 2378999999999999999999999
Q ss_pred hhcccccCC
Q 026008 236 LYHGQVTNS 244 (245)
Q Consensus 236 l~~~~~~q~ 244 (245)
+..+|++|+
T Consensus 242 ~~~~~l~Qv 250 (469)
T PF03155_consen 242 LYSGQLQQV 250 (469)
T ss_pred HHhhhHHHH
Confidence 998999986
No 2
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-76 Score=549.83 Aligned_cols=231 Identities=31% Similarity=0.567 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHhc-cc-------cCCchhHhhhHHHHhccCCccccccc----ccccccCCCCchHHHHHHHHhhhhhcc
Q 026008 14 FAIAVCVKLLLIP-AY-------HSTDFEVHRHWLALTHSLPLSNWYAD----ETSPWTLDYPPFFACFERFLSIFAHYI 81 (245)
Q Consensus 14 ~~~~~~~k~ll~p-~y-------~s~DfE~~R~WmeiT~~lp~~~WY~~----~~s~W~lDYPPl~ay~~~l~g~ia~~~ 81 (245)
..++.++|...-- +| +.|||||||||||||.|+|++|||+| |.+||||||||+||||+|++|.+++++
T Consensus 37 ~~~~l~~r~~Isl~pYSG~~~PPmyGDyEAQRHWmEIT~nLPv~qWY~n~t~NDLqYWGLDYPPLTAYhSyl~G~i~~f~ 116 (510)
T KOG2575|consen 37 LLVLLCVRSAISLNPYSGAGSPPMYGDYEAQRHWMEITVNLPVSQWYFNGTHNDLQYWGLDYPPLTAYHSYLLGIIGNFI 116 (510)
T ss_pred HHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHHhhcCcHHHHhhcCCCCccceecCCCCcHHHHHHHHHHHHHhhc
Confidence 4557888887533 23 57999999999999999999999999 568999999999999999999999999
Q ss_pred CCcceeeccCCccCCcchhhhHHHHHHHHHHHHH-HHHHHHHhcc----chhhHHHHHHHHHHhhhhhhccccchhhhhH
Q 026008 82 DPQIVDLHNGLNYRANSAIYFLRISVILSDLWLL-YGVYRLTKNA----DVKRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (245)
Q Consensus 82 ~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~-~~~~~~~~~~----~~~~~~~~~~~~llnP~liliDh~HFQyN~~ 156 (245)
||+|+++++||||||..+|+|||.|||++|++++ +++..++++. ++..+.+.++.++++|++++||||||||||+
T Consensus 117 NP~wvaL~tSRGfES~~hKlfMR~TViisd~liy~Pa~ify~~~~~r~~~~~~~~a~~~~iLl~P~L~LID~GHFQYNsi 196 (510)
T KOG2575|consen 117 NPEWVALHTSRGFESIAHKLFMRSTVIISDLLIYLPALIFYFKWLHRTRSKKSKIAYAALILLYPSLLLIDHGHFQYNSI 196 (510)
T ss_pred ChhHhhhhccCCcccHHHHHHHHHHHHHHhHHHHhhHHHHHHHHhhhccCcccHHHHHHHHHhCCceEEEecCcceechh
Confidence 9999999999999999999999999999999995 4777666655 3334455578889999999999999999999
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 026008 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFL 236 (245)
Q Consensus 157 ~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~PFl 236 (245)
|+|++++|++.+.+++++.|+++|++|+|+|||+||+||++|+|+|++|.+++...++.|++++|++|++||+++|.||+
T Consensus 197 sLGl~~~ai~~ll~~~~~~as~~F~LAlnyKQMeLY~A~pfF~fLLg~c~k~k~~~~f~ri~~ia~~Vv~TF~iiw~P~~ 276 (510)
T KOG2575|consen 197 SLGLTLYAIAALLKNFYVLASVLFVLALNYKQMELYHALPFFAFLLGSCLKPKLFNSFARIIKIALAVVGTFVIIWLPFL 276 (510)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876655544799999999999999999999999
Q ss_pred hcc-cccCC
Q 026008 237 YHG-QVTNS 244 (245)
Q Consensus 237 ~~~-~~~q~ 244 (245)
..+ +..|+
T Consensus 277 ~~~~~~~qv 285 (510)
T KOG2575|consen 277 LSGDTALQV 285 (510)
T ss_pred hccchHHHH
Confidence 854 55554
No 3
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=100.00 E-value=3.1e-76 Score=548.62 Aligned_cols=239 Identities=57% Similarity=1.004 Sum_probs=218.9
Q ss_pred cchHHHHHHHHH-HHHHHHHHhccccCCchhHhhhHHHHhccCCcccccccccccccCCCCchHHHHHHHHhhhhh--cc
Q 026008 5 SSTRQLLWFFAI-AVCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAH--YI 81 (245)
Q Consensus 5 ~~~~~~~w~~~~-~~~~k~ll~p~y~s~DfE~~R~WmeiT~~lp~~~WY~~~~s~W~lDYPPl~ay~~~l~g~ia~--~~ 81 (245)
+.+++++|.+++ .+.+|++|+|+|||||||||||||+||+++|++|||+|.||+||||||||+||+||.++++|+ .+
T Consensus 1 ~g~~~ll~~~~~~~t~lK~LLIP~Y~STDFEVHRNWLAIT~slPlseWY~eaTSeWTLDYPPFFAYFE~~LS~vA~ff~f 80 (500)
T KOG2576|consen 1 MGKRQLLWAFAIITTFLKCLLIPAYRSTDFEVHRNWLAITHSLPLSEWYYEATSEWTLDYPPFFAYFEWFLSQVAKFFGF 80 (500)
T ss_pred CchhHhHHHHHHHHHHHHheeeccccccchhhhhhHHHHhccCchHHHHHhcccceecCCCcHHHHHHHHHHHHHHHhcC
Confidence 368899998755 569999999999999999999999999999999999999999999999999999999999999 68
Q ss_pred CCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHH---HHHhccch--hhHHHHHHHHHHhhhhhhccccchhhhhH
Q 026008 82 DPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVY---RLTKNADV--KRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (245)
Q Consensus 82 ~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~---~~~~~~~~--~~~~~~~~~~llnP~liliDh~HFQyN~~ 156 (245)
||+|+.+ .+.||+|..+++|||.|||++|++.++++. +..++.+| +++.+.+..+++|||++|+||+||||||+
T Consensus 81 D~~ml~~-~~l~y~s~~tl~FQR~SVIf~dll~~~~~rr~~~l~~kl~k~~~~~~~~a~ll~~s~gLlIvDhIHFQYNgf 159 (500)
T KOG2576|consen 81 DPRMLDV-KNLNYFSRRTLYFQRFSVIFSDLLLLYGLRRSYRLTSKLGKDQKQRFACAVLLLLSPGLLIVDHIHFQYNGF 159 (500)
T ss_pred Cchheec-cccCCCCcceEEEEeehhHHHHHHHHHHHhhhhcccccCCcccccchHHHHHHHhCCCcEEEEEeeeecccH
Confidence 9999998 679999999999999999999999998864 34455543 34556677789999999999999999999
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhccc--c-hhHHHHHHHHHHHHHHHHHHHH
Q 026008 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGL--V-RGFSRLSVLGAVVVAVFAAAYG 233 (245)
Q Consensus 157 ~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~--~-~~~~~l~~lg~~vi~tf~l~f~ 233 (245)
++|++++||.++.++|++++|+.|++++||||+++|+||++++|+||.||..+. . .++.|.+|+|.+|+++|+++++
T Consensus 160 LfgilLlSI~~l~~kr~l~~A~~fsvll~FKHIflY~ApaY~vylLr~Yc~~~nn~~~~~~~~vikL~~vv~~~F~~s~g 239 (500)
T KOG2576|consen 160 LFGILLLSIVFLKTKRYLLSAFLFSVLLNFKHIFLYVAPAYFVYLLRNYCLTSNNVFLANFLNVIKLGIVVLIPFAASFG 239 (500)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhheeeechhHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999998642 1 2578999999999999999999
Q ss_pred HHhhcccccCC
Q 026008 234 PFLYHGQVTNS 244 (245)
Q Consensus 234 PFl~~~~~~q~ 244 (245)
||++.+|++|+
T Consensus 240 Pf~~~~qlpqv 250 (500)
T KOG2576|consen 240 PFIYVQQLPQV 250 (500)
T ss_pred cHHHHHHhHHH
Confidence 99999999996
No 4
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=99.40 E-value=4.8e-11 Score=115.37 Aligned_cols=168 Identities=17% Similarity=0.182 Sum_probs=129.6
Q ss_pred HHHHHhccccCCchh---HhhhHHHHhcc---C-Cc--cccccccc-cc---ccCCCCchHHHHHHHHhhhhhccCCcce
Q 026008 20 VKLLLIPAYHSTDFE---VHRHWLALTHS---L-PL--SNWYADET-SP---WTLDYPPFFACFERFLSIFAHYIDPQIV 86 (245)
Q Consensus 20 ~k~ll~p~y~s~DfE---~~R~WmeiT~~---l-p~--~~WY~~~~-s~---W~lDYPPl~ay~~~l~g~ia~~~~p~~~ 86 (245)
+=+++.|+-.|.|+- +|-.=+.-..| . |- .+...++- .. -+..|||++.+.+...+.+ .++.+
T Consensus 87 ~Pll~a~PlfSrDvYsYlaqG~l~~~G~dPY~~gP~~~~~~~~~~v~~~W~~t~aPYGPl~l~i~~~v~~l----~g~~i 162 (470)
T TIGR03459 87 GPLLFAVPMMSRDVYSYLMQGALLRDGFDPYTVGAAANPGPLLDEVSPDWRNTTTPYGPLHLLVGQAITTV----TGDNV 162 (470)
T ss_pred HHHHhcCCcccHHHHHHHHHHHHHHcCCCccccCCccCCchHhhhcCchhccCCCCCChHHHHHHHHHHHH----hCCCc
Confidence 446677788899987 77554422111 0 11 12222332 23 3568999999998886666 33432
Q ss_pred eeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhhh--ccccchhhhhHHHHHHHHH
Q 026008 87 DLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPALVM--VDHLHFQYNGFLLGWLLLS 164 (245)
Q Consensus 87 ~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~llnP~lil--iDh~HFQyN~~~lGlll~s 164 (245)
...++.+|+..+++|+++.+++.++.|+.+.+++.+ ..+..+||-+|+ +++.|+ |++|+|+++.+
T Consensus 163 ----------~~~v~~~Rl~~l~g~~l~~w~~~rLar~~g~~~~~A-lWL~~~NPLviihlvgg~Hn--ealM~gl~l~g 229 (470)
T TIGR03459 163 ----------TAGTLAFKLLSLPGLAVMVWAVPKLATHLGGNPTVA-LWLGVLNPLVVIHLIGGMHN--EMLMVGLVSAG 229 (470)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHcCchhhhhhhcchhH--HHHHHHHHHHH
Confidence 256889999999999999999999999987655443 344789999999 899999 99999999999
Q ss_pred HHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 026008 165 ISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRH 204 (245)
Q Consensus 165 i~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~ 204 (245)
+++..++|.+.|+++.+++.+.|..++...|.++....++
T Consensus 230 l~~~~r~~~~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~ 269 (470)
T TIGR03459 230 ILLALKRRPVAGIALIAVAVALKATAGIALPFVVWIWVAH 269 (470)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988776665
No 5
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.67 E-value=1.2e-06 Score=75.46 Aligned_cols=115 Identities=21% Similarity=0.321 Sum_probs=76.0
Q ss_pred CCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccchh----hHHHH-HHH
Q 026008 62 DYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVK----RRYLI-WVL 136 (245)
Q Consensus 62 DYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~~~----~~~~~-~~~ 136 (245)
-|||.+++.....+.+ +++ ......+...+++.... ++...++.+++ ..... ..+
T Consensus 2 ~YpP~~~~l~~p~~~l----~~~-------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 61 (241)
T PF09594_consen 2 VYPPLFALLFAPLALL----PFP-------------VAFLLWALLSLAALALA---VRLLLRRLGRRKPPGRALLLALLL 61 (241)
T ss_pred cCcHHHHHHHHHHHHc----CHH-------------HHHHHHHHHHHHHHHHH---HHHHHHHhCcCcchhHHHHHHHHH
Confidence 3999999999998765 222 11222233333333333 34444444321 12222 234
Q ss_pred HHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHH
Q 026008 137 IVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYF 198 (245)
Q Consensus 137 ~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f 198 (245)
+.++|. ..+..-.|.|.+...+++.++++..++|+.+++++++++...|+.++.+.|.+.
T Consensus 62 ~~~~p~--~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll 121 (241)
T PF09594_consen 62 LAFPPV--LSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALL 121 (241)
T ss_pred HHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555 344455677999999999999999999999999999999999999999988443
No 6
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=98.67 E-value=2e-07 Score=88.89 Aligned_cols=182 Identities=18% Similarity=0.259 Sum_probs=138.0
Q ss_pred ccCCchhHh-hhHHHHhccCCc-ccccccccccccCCCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHH
Q 026008 28 YHSTDFEVH-RHWLALTHSLPL-SNWYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRI 105 (245)
Q Consensus 28 y~s~DfE~~-R~WmeiT~~lp~-~~WY~~~~s~W~lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~ 105 (245)
-+|-|+-.| -||-+.-...-. .+-+ .+.-.||+|+.-|...+.++++.-+ ...+--.+
T Consensus 62 ~~s~~~~~fl~~w~af~~~~~~f~~~~----k~~~~~~~p~~~y~i~ii~~L~~~~----------------~~~l~~~l 121 (420)
T COG5542 62 NRSVIYAPFLVHWYAFIALNGGFVRVL----KSHFADYFPLYLYWIRIINKLLSSL----------------YFILAIKL 121 (420)
T ss_pred CcchhhhHHHHHHHHHHHhhhhhhhhh----hccccccCchHHHHHHHHHHHHhhh----------------HHHHHHHH
Confidence 456666665 566665433211 1222 2234799999999999999996541 22344677
Q ss_pred HHHHHHHHHHHHHHHHHhcc-c--hhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHH
Q 026008 106 SVILSDLWLLYGVYRLTKNA-D--VKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAV 182 (245)
Q Consensus 106 tVI~~Dl~~~~~~~~~~~~~-~--~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~ 182 (245)
..+.+|....+.+++..|+. + +..+. +..++.++|+.|...-+..|=||+-..+...+++++.+++...|+++|++
T Consensus 122 ~s~~~~~~~ay~lY~~tk~~y~~~~~a~f-a~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faL 200 (420)
T COG5542 122 FSNIADFVAAYFLYKITKLRYGLGSMARF-ATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFAL 200 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhhh-eEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHH
Confidence 88899999999999988764 2 44444 35667789999999999999999999999999999999999999999999
Q ss_pred HhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 183 LLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 183 al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
+..+|...+.++|.+.+.+.+. ++++........+-.++.....|...
T Consensus 201 a~l~Rsngi~~~p~fl~~~ik~-------~~ik~i~~~l~~~~l~~~~ll~~~~~ 248 (420)
T COG5542 201 ATLFRSNGIFLSPLFLIPLIKN-------RKIKIIWYLLPSGSLTYLSLLMPAWI 248 (420)
T ss_pred HHHhccchhHHHHHHHHHHHhh-------hhHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999776 23555556556666666677777743
No 7
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=98.54 E-value=1.1e-05 Score=64.89 Aligned_cols=149 Identities=21% Similarity=0.369 Sum_probs=107.8
Q ss_pred CCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHh
Q 026008 62 DYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWS 140 (245)
Q Consensus 62 DYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~-~~~~~~~~~~~~lln 140 (245)
|=||++.+......++- + .+....|+..++.-.+.....++..|+. +++.+....+++.+.
T Consensus 1 ~~pPl~~~~~~~~~~l~---G---------------~~~~~~~~~~~l~~~~~~~~~y~i~r~~~~~~~a~~~~l~~~~~ 62 (159)
T PF13231_consen 1 DHPPLYFLLLALFFKLF---G---------------DSVWALRLFNILFSLLTLLLIYLIARRLFGRRAALIAALLLALS 62 (159)
T ss_pred CCChHHHHHHHHHHHHh---C---------------cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHh
Confidence 56999999998877762 1 1334689999999988888888888877 555566667778889
Q ss_pred hhhhhccccchhhhhHHHHHHHHHHHHHH----cCC---hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchh
Q 026008 141 PALVMVDHLHFQYNGFLLGWLLLSISFLQ----EGK---DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRG 213 (245)
Q Consensus 141 P~liliDh~HFQyN~~~lGlll~si~~l~----~~~---~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~ 213 (245)
|..+.-.. ..+-|..+..+.+++++... +++ .++++++++++...|...+.+.|+.+.+++.+ + +.
T Consensus 63 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~~l~~~---~---~~ 135 (159)
T PF13231_consen 63 PMFIFYSA-SARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLLYLLLS---R---RR 135 (159)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h---HH
Confidence 98877444 67778999999888888764 233 36799999999999999999999998887665 1 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 026008 214 FSRLSVLGAVVVAVFAAAYGPFL 236 (245)
Q Consensus 214 ~~~l~~lg~~vi~tf~l~f~PFl 236 (245)
.|+-... ...++...+.+.|.+
T Consensus 136 ~~~~~~~-~~~~~~~~~~~~p~l 157 (159)
T PF13231_consen 136 LKRKIFI-LIAVLIALLVFLPWL 157 (159)
T ss_pred HHhHHHH-HHHHHHHHHHHHHHH
Confidence 4442222 223344456666654
No 8
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=98.35 E-value=4.3e-07 Score=88.84 Aligned_cols=188 Identities=16% Similarity=0.181 Sum_probs=121.0
Q ss_pred CchhHhhhHHHHhccCCcccccccccc--cccCCCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHH
Q 026008 31 TDFEVHRHWLALTHSLPLSNWYADETS--PWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVI 108 (245)
Q Consensus 31 ~DfE~~R~WmeiT~~lp~~~WY~~~~s--~W~lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI 108 (245)
+|||.--+|+|+-.+ .+|+..+++ .=...||+++-=..+ .|.+....=|.-.++--. + + ....-+=..|.
T Consensus 103 ~~~p~~asw~~vh~~---~P~~r~~ms~af~y~~yPv~~~~y~~-~~~v~~~~Y~~L~~ll~l-P-~--~~ef~~~f~V~ 174 (536)
T COG5650 103 LTFPYYASWLEVHGF---DPYVRYNMSKAFRYMHYPVLGTPYQT-GGYVIYFSYPGLSALLFL-P-V--LFEFNPFFKVL 174 (536)
T ss_pred ccchhhhhheeecCC---CccchhhhhhhheeEeeccccCcccc-cceEEEEEecchhhhccC-c-c--ccccchhhhHH
Confidence 489999999987655 556666654 224579998821111 122222222221111000 0 0 11122344555
Q ss_pred HHHHHHHH-HHHHHHhccchhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhh
Q 026008 109 LSDLWLLY-GVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFK 187 (245)
Q Consensus 109 ~~Dl~~~~-~~~~~~~~~~~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K 187 (245)
+.-+..+. .+.++.|+--...+.+..++...+|-+...|-.-| +.+-.+++..+..+ ++|...||++++++..+|
T Consensus 175 AF~~A~~~l~~i~~~r~gl~~~~~~~valv~as~~v~f~v~~~~--DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~K 250 (536)
T COG5650 175 AFLLALIWLLVIYFIRKGLAGSRVLDVALVAASPLVGFAVFTVF--DTIWAFFLAAALVC--RGRPKLAGVLIGLSSAFK 250 (536)
T ss_pred HHHHHHHHHHHHHHHHhcccccceeeeeeeeccceEEEEEecch--hHHHHHHHHHHHHh--cCCchHHHHHHHHHHHhh
Confidence 54444433 33444433222223444566678994444566655 99988888888777 999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 188 HLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 188 ~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
|.+++++|++..++-+++ +.+..+++..+.++|++++.+||+.
T Consensus 251 ~~P~Ivl~pll~~~~key-------g~~~a~~f~~~aa~t~lLvN~PfiI 293 (536)
T COG5650 251 QIPLIVLPPLLYLIYKEY-------GLRPAIKFIATAAITWLLVNLPFII 293 (536)
T ss_pred cCchhhHHHHHHHHHHhc-------CcchHHHHHHHHHHHHHHHcCceEE
Confidence 999999999988775553 5778888999999999999999995
No 9
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=97.90 E-value=0.0022 Score=62.86 Aligned_cols=170 Identities=19% Similarity=0.242 Sum_probs=115.2
Q ss_pred HHHHHH-HHHHHHHHHHHhccccCCc------hhHhhhHHHHhccCCcccccccccccccCCCCchHHHHHHHHhhhhhc
Q 026008 8 RQLLWF-FAIAVCVKLLLIPAYHSTD------FEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAHY 80 (245)
Q Consensus 8 ~~~~w~-~~~~~~~k~ll~p~y~s~D------fE~~R~WmeiT~~lp~~~WY~~~~s~W~lDYPPl~ay~~~l~g~ia~~ 80 (245)
+...|+ +..+..+.+.....+...| .|+.|+..|...+ +..++.+.. +.|.||+..|...+.-++-
T Consensus 7 ~~~~~llll~~~~~~l~~l~~~~~~~~de~~~~~~~~~m~~s~~w--~~~~~~g~~---~~~kPPl~~Wl~a~~~~lf-- 79 (535)
T COG1807 7 RLLLWLLLLIALALLLPGLGSRPLWDPDEARYAEIAREMLESGDW--FTPQLLGLP---YFEKPPLVYWLQALSYLLF-- 79 (535)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCCCCCchhHHHHHHHHHHcCCC--cceeeCCcc---ccCCCcHHHHHHHHHHHHc--
Confidence 334444 4555666555444454455 8999999985544 443333222 4689999999888744442
Q ss_pred cCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc-hhhHHHHHHHHHHhhhhhhccccchhhhhHHHH
Q 026008 81 IDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNAD-VKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLG 159 (245)
Q Consensus 81 ~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~-~~~~~~~~~~~llnP~liliDh~HFQyN~~~lG 159 (245)
+ .+-.-.|+...++=.+..+.++.+.|+.. ++...++.+.+++.|.++...+.+- =|..+.+
T Consensus 80 -G---------------~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~~~a~~aali~~~~p~~~~~~~~~~-~D~~l~~ 142 (535)
T COG1807 80 -G---------------VNEWSARLPSALAGALTALLVYWLAKRLFGRLAALLAALILLLTPLFFLIGRLAL-LDAALAF 142 (535)
T ss_pred -C---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhHHHh-hhHHHHH
Confidence 1 12245899999888877778888888773 3455666788889999998765553 3777788
Q ss_pred HHHHHHHHHHc---C--C---hhHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 026008 160 WLLLSISFLQE---G--K---DLMGGFLFAVLLCFKHLFAVAAPVYFVYL 201 (245)
Q Consensus 160 lll~si~~l~~---~--~---~l~~av~F~~al~~K~m~Ly~AP~~f~yL 201 (245)
++.+|++++.+ + + .+..++..+++.+.|-...+..|+++..+
T Consensus 143 f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~~~~~~~ 192 (535)
T COG1807 143 FLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLPLILLLL 192 (535)
T ss_pred HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 88777777542 1 2 25668899999999999999999534433
No 10
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=97.82 E-value=0.00027 Score=62.24 Aligned_cols=96 Identities=18% Similarity=0.167 Sum_probs=72.1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhccc--hhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcC----
Q 026008 98 SAIYFLRISVILSDLWLLYGVYRLTKNAD--VKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEG---- 171 (245)
Q Consensus 98 ~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~--~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~---- 171 (245)
.+..-+|....++-.+....++...++.. +.....+.++++++|..+.... .--=|+.+..+.++|++++.+.
T Consensus 80 ~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr-~~~~D~~l~~f~~la~~~~~~~~~~~ 158 (245)
T PF02366_consen 80 VNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSR-YALLDSILLFFILLAIYCLLRWYRYQ 158 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 45567999999999998888888877763 4445566778888998887433 2333778888888888876554
Q ss_pred --------ChhHHHHHHHHHhhhhhhHHHHH
Q 026008 172 --------KDLMGGFLFAVLLCFKHLFAVAA 194 (245)
Q Consensus 172 --------~~l~~av~F~~al~~K~m~Ly~A 194 (245)
..+.+++..++++..|....+..
T Consensus 159 ~~~~~~~~~~~l~gi~lGla~~~K~~~~~~~ 189 (245)
T PF02366_consen 159 PFRRKWWLWLLLAGIALGLAILTKGPGLLLV 189 (245)
T ss_pred ccccccHHHHHHHHHHHHHHHHhchhHHHHH
Confidence 13678999999999999988655
No 11
>PLN02841 GPI mannosyltransferase
Probab=97.81 E-value=0.00063 Score=66.07 Aligned_cols=159 Identities=14% Similarity=0.165 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHhccccCCchhHhhhHHHHhccCCcccccc---------cccc---cccCCCCchHHHHHHHHhhhhhc
Q 026008 13 FFAIAVCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYA---------DETS---PWTLDYPPFFACFERFLSIFAHY 80 (245)
Q Consensus 13 ~~~~~~~~k~ll~p~y~s~DfE~~R~WmeiT~~lp~~~WY~---------~~~s---~W~lDYPPl~ay~~~l~g~ia~~ 80 (245)
.+.++.++|+.++- | | |-|++-+|+ +.|..++.. ++.| --|--|||+-++..
T Consensus 11 vll~a~~lRl~L~~-y--g--~~~D~~~eV--sytdidY~vftDga~lv~~G~SPY~r~TYrytPLLa~Ll--------- 74 (440)
T PLN02841 11 LLLASALLRVALIV-Y--G--EWQDAHMEV--RYTDVDYLVFSDAAALVASGKSPFARDTYRYSPLLALLL--------- 74 (440)
T ss_pred HHHHHHHHHHHHHH-H--H--HHhccCccc--cccccchHHHHHHHHHHHcCCCCCCCCCCCcChHHHHHH---------
Confidence 45667888988865 2 2 222333432 234444332 1111 22567999999877
Q ss_pred cCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc--hhhHHHHHHHHHHhhhhhhccc-cchhhhhHH
Q 026008 81 IDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNAD--VKRRYLIWVLIVWSPALVMVDH-LHFQYNGFL 157 (245)
Q Consensus 81 ~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~--~~~~~~~~~~~llnP~liliDh-~HFQyN~~~ 157 (245)
-|+. ..+..+-+.-=+++|++..+.+.+..++.+ .+.......++++||-.|.+.- |-- +++.
T Consensus 75 -lPn~-----------~~~~~fgk~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NPlti~istrGSs--e~i~ 140 (440)
T PLN02841 75 -VPNS-----------LLHRSWGKFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNPFTFTIGTRGNC--EPIV 140 (440)
T ss_pred -cchh-----------hhhhhHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCcHHHHHhcccch--HHHH
Confidence 1321 011235666667999999777776665332 2223344677899999998632 334 7888
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 026008 158 LGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYL 201 (245)
Q Consensus 158 lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yL 201 (245)
-.+++++++++.+||...||+++++++.+|-=|++++|++..++
T Consensus 141 ~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~l 184 (440)
T PLN02841 141 CAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILVL 184 (440)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Confidence 88889999999999999999999999999999999999999888
No 12
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=97.56 E-value=0.0053 Score=58.51 Aligned_cols=127 Identities=17% Similarity=0.334 Sum_probs=95.3
Q ss_pred CCCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc----h---------
Q 026008 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNAD----V--------- 127 (245)
Q Consensus 61 lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~----~--------- 127 (245)
..+||+.-+....+.+ + ..++........+.-+++|++..+.+++..|+.+ +
T Consensus 56 ~h~~PLlL~l~~~l~~-----~----------~~~~~~~~~~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~ 120 (382)
T PF06728_consen 56 FHQPPLLLALFSFLLK-----S----------SPNSPNSPILISLLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKS 120 (382)
T ss_pred ccCcCHHHHHHHHHHh-----c----------ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcc
Confidence 5689999887766543 0 1112344556777788999999887776654321 1
Q ss_pred hhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 026008 128 KRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLR 203 (245)
Q Consensus 128 ~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~ 203 (245)
.........|++||-.|+ -++--.-..+--.+++.+++...+|+...+++..+++.....-+++..|+....+..
T Consensus 121 ~~~~lv~~~YLfNP~tIl-scva~ST~~f~nl~i~~sl~~a~~g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~~ 195 (382)
T PF06728_consen 121 SSPWLVAAFYLFNPLTIL-SCVALSTTVFTNLFILLSLYFAVKGNVFLSAISLALATYLSLYPILLLPPLLLLLYS 195 (382)
T ss_pred cchHHHHHHHHHCHHHHH-HHHhcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 234566899999999998 233333477777888999999999999999999999999999999999999877765
No 13
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=97.52 E-value=0.0005 Score=65.30 Aligned_cols=77 Identities=26% Similarity=0.333 Sum_probs=67.2
Q ss_pred hhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHH
Q 026008 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (245)
Q Consensus 154 N~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~ 233 (245)
+|+...++..|+.++.++|+.+|+++|+++++.|-=.|.++|++.+.++.. .+..+.+....+..++-.++-.
T Consensus 130 D~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~~l~~-------~g~~~~~~~l~v~~~vQvllg~ 202 (368)
T PF05208_consen 130 DCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVLLLQS-------LGLLKTLWYLAVCALVQVLLGL 202 (368)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhh
Confidence 466677777899999999999999999999999999999999998888765 2677778877888888899999
Q ss_pred HHhh
Q 026008 234 PFLY 237 (245)
Q Consensus 234 PFl~ 237 (245)
||+.
T Consensus 203 PFL~ 206 (368)
T PF05208_consen 203 PFLL 206 (368)
T ss_pred HHHH
Confidence 9995
No 14
>PRK13375 pimE mannosyltransferase; Provisional
Probab=97.46 E-value=0.027 Score=54.49 Aligned_cols=187 Identities=21% Similarity=0.266 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHH---hcc-ccCCchhHhhhHHHHh-ccCCcccccccc-c--ccccCCCCchHHHHHHHHhhhhhcc
Q 026008 10 LLWFFAIAVCVKLLL---IPA-YHSTDFEVHRHWLALT-HSLPLSNWYADE-T--SPWTLDYPPFFACFERFLSIFAHYI 81 (245)
Q Consensus 10 ~~w~~~~~~~~k~ll---~p~-y~s~DfE~~R~WmeiT-~~lp~~~WY~~~-~--s~W~lDYPPl~ay~~~l~g~ia~~~ 81 (245)
..|.++++.+.|..- .|. ...-|+|+-|.=-+.- +..++.+.=+.+ + ..-.--|||+.+....=++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~vDl~VYr~g~~~~~~g~~LYd~~~~~~~~~~~LpFtYPPfaallf~PLalL---- 95 (409)
T PRK13375 20 APLLLVLSVAARLAWTYLAPNGANFVDLHVYVGGAAALDHPGTLYDYVYADQTPDFPLPFTYPPFAALVFYPLHLL---- 95 (409)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCCccHHHHHHhHHHHccCCcccCccccccCCCCCCCCCCCcHHHHHHHHHHhc----
Confidence 456777788877763 232 2347998875422211 223555433221 1 111234999999999888766
Q ss_pred CCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHH-hccch---hhHHHH--HHHHHHhhhhhhccccc-hhhh
Q 026008 82 DPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLT-KNADV---KRRYLI--WVLIVWSPALVMVDHLH-FQYN 154 (245)
Q Consensus 82 ~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~-~~~~~---~~~~~~--~~~~llnP~liliDh~H-FQyN 154 (245)
+.. ..+....+.-+..++.+.+.. +..+. .++... ....+..+.+- +|.. .|-|
T Consensus 96 p~~-----------------~a~~l~~~~~~~al~~~v~~~~r~l~~~~~~~~~a~~~~~~~l~~ePv~--~tl~~GQIN 156 (409)
T PRK13375 96 PFG-----------------VVAFLWQLATIAALYGVVRISQRLLGGGAGGHRVAMLWTAVGIWLEPVR--STFDYGQIN 156 (409)
T ss_pred cHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHhHHHH--HHHHhCcHH
Confidence 211 122222233334444333322 22211 112211 11112233332 3333 4669
Q ss_pred hHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHH
Q 026008 155 GFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (245)
Q Consensus 155 ~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~ 233 (245)
.++..+.++. +.++|...++++..++.+.|..+..+.+ |++.+ |.+|....-+.+..++.++.+.
T Consensus 157 ~lL~~Lv~~d---ll~~r~~~aGvliGLAaaIKlTPavf~l----~lL~~-------RrWra~~~A~~t~~~~~~lg~~ 221 (409)
T PRK13375 157 VFLMLAVLYA---VYSSRWWLSGLLVGLAAGVKLTPAITGL----YFLGA-------RRWAAAAFSAVVFLATVGVSYL 221 (409)
T ss_pred HHHHHHHHHH---HhcCCccHHHHHHHHHHHhhhhhHHHHH----HHHHh-------CHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887765 3477888899999999999999988543 33332 2455555545555554444443
No 15
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=97.38 E-value=0.00079 Score=63.13 Aligned_cols=132 Identities=14% Similarity=0.180 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hccchhhHHHHHHHHHHhhhhhhc-cccchhhhhHHHHHHHHHHHHHHcCChhHHHHH
Q 026008 103 LRISVILSDLWLLYGVYRLT--KNADVKRRYLIWVLIVWSPALVMV-DHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFL 179 (245)
Q Consensus 103 mR~tVI~~Dl~~~~~~~~~~--~~~~~~~~~~~~~~~llnP~lili-Dh~HFQyN~~~lGlll~si~~l~~~~~l~~av~ 179 (245)
-+.--..+|+++..-.+++. |+.+++++.+.....++||...+| ..|.- ||+.-.+.++-++++++++...||++
T Consensus 98 GK~Lf~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fWLlNPl~aiIStRGNa--esi~~~lvi~~lyllqK~~v~~A~l~ 175 (405)
T KOG3893|consen 98 GKLLFAIFDLLIATLIYKLLHMRSISRKQALIYASFWLLNPLTAIISTRGNA--ESIVAFLVILTLYLLQKSEVFLAGLA 175 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhhhhcCchheeeecCCch--HHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 45555788998877666665 345666666667777999999886 44555 99999999999999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHH------HHHHHHHHHHHHHHHHHHh
Q 026008 180 FAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRL------SVLGAVVVAVFAAAYGPFL 236 (245)
Q Consensus 180 F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l------~~lg~~vi~tf~l~f~PFl 236 (245)
.++++.+|--|+.+.|+++.++..+.-.+....++..+ +++..+++.+|+++-.-|.
T Consensus 176 ~GlaIh~KIYPliY~l~i~l~ls~~~~~s~~~~~l~sLL~~~k~l~~~~~tLtsf~~~~~~fY 238 (405)
T KOG3893|consen 176 HGLAIHLKIYPLIYSLAIYLSLSTRKTQSTPLDKLCSLLSINKQLCLILGTLTSFAACTWTFY 238 (405)
T ss_pred hhheeeeEechHHhhhhhheEEecCCCCCcHHHHHHHHhccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999998885542111000012222 4455666777777633333
No 16
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=97.20 E-value=0.0013 Score=59.99 Aligned_cols=80 Identities=23% Similarity=0.239 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcc---cchhH-HHHHHHHHHHHHHHH
Q 026008 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKG---LVRGF-SRLSVLGAVVVAVFA 229 (245)
Q Consensus 154 N~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~---~~~~~-~~l~~lg~~vi~tf~ 229 (245)
|+++-.+.+++++++.+||...||+++++++++|-=|+.|+|++..|+.++...+. ..+.+ ++-++++.+.++|++
T Consensus 8 Esl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~f~~~s~~tf~ 87 (259)
T PF05007_consen 8 ESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLYLSNRKNGSFRSRLKRLLNPNRLKFGLISAITFA 87 (259)
T ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHHHhccccchHHHHHHHhcCHhHhhhHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999865532110 00101 234566777766665
Q ss_pred HHHH
Q 026008 230 AAYG 233 (245)
Q Consensus 230 l~f~ 233 (245)
+.-+
T Consensus 88 ~l~~ 91 (259)
T PF05007_consen 88 ALTL 91 (259)
T ss_pred HHHH
Confidence 5443
No 17
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=97.11 E-value=0.093 Score=52.60 Aligned_cols=151 Identities=15% Similarity=0.182 Sum_probs=89.7
Q ss_pred CCCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhcc--chhhHHHHHHHHH
Q 026008 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA--DVKRRYLIWVLIV 138 (245)
Q Consensus 61 lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~--~~~~~~~~~~~~l 138 (245)
.|-||+.-|.-.+.-++ +.. +-.-.|+...++=++....++.+.++. +++....+.++++
T Consensus 60 ~eKPPL~yWl~Als~~L---FG~---------------~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~AllAaLIll 121 (552)
T PRK13279 60 FEKPIAGYWINSIGQWL---FGD---------------NNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALLAALIYL 121 (552)
T ss_pred CCCCcHHHHHHHHHHHH---cCC---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 48999998877774444 221 123589999998888877788888876 3444555566667
Q ss_pred HhhhhhhccccchhhhhHHHHHHHHHH---HHHHcC-----C---hhHHHHHHHHHhhhhhhHHHHHHHHH--HHHHHHH
Q 026008 139 WSPALVMVDHLHFQYNGFLLGWLLLSI---SFLQEG-----K---DLMGGFLFAVLLCFKHLFAVAAPVYF--VYLLRHY 205 (245)
Q Consensus 139 lnP~liliDh~HFQyN~~~lGlll~si---~~l~~~-----~---~l~~av~F~~al~~K~m~Ly~AP~~f--~yLL~~~ 205 (245)
.+|.+....|.+ .-+..+..+...|+ +...++ + ++..++..++++..|=......|... .+++.+
T Consensus 122 s~~~v~~~g~~a-~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~LTKG~ial~lP~l~il~~ll~~- 199 (552)
T PRK13279 122 SLFLVYGIGTYA-VLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFMTKGFLALAVPVISVLPWVIWQ- 199 (552)
T ss_pred HHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHh-
Confidence 788777655444 12444444444443 333321 2 34556778899999986666666433 333332
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 206 CWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 206 ~~~~~~~~~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
+++++....+...+++++++.+|...
T Consensus 200 ------rr~~~ll~~~~l~llvalli~lPW~l 225 (552)
T PRK13279 200 ------KRWKELLIYGPLAVLSAVLVSLPWAL 225 (552)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13445444444444555666677653
No 18
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=96.94 E-value=0.077 Score=53.76 Aligned_cols=121 Identities=21% Similarity=0.260 Sum_probs=73.8
Q ss_pred CCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHhh
Q 026008 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADV-KRRYLIWVLIVWSP 141 (245)
Q Consensus 63 YPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~~-~~~~~~~~~~llnP 141 (245)
||||+.|.-.+++.+.. |+ ....++.++++=++...+.+.+.|+.++ ..+.+..+++++.|
T Consensus 4 YpPL~yyl~a~l~~l~g--~~----------------~~Ay~l~~~L~~~l~~~~~Y~~~R~~~~~~~A~l~aiLyl~~p 65 (616)
T PF10131_consen 4 YPPLPYYLGALLSLLFG--NP----------------IVAYKLFIFLAFFLGGLGMYFLGRRLGRRKAAILAAILYLFSP 65 (616)
T ss_pred CCcHHHHHHHHHHHHhC--CH----------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhH
Confidence 99999999999998841 11 1224555566655555567777777755 33455678888999
Q ss_pred hhhhccccchhhhhH----HHHHHHHHHHHHHcCCh----hHHHHHHHHHhhhhh--hHHHHHHHHHHHHH
Q 026008 142 ALVMVDHLHFQYNGF----LLGWLLLSISFLQEGKD----LMGGFLFAVLLCFKH--LFAVAAPVYFVYLL 202 (245)
Q Consensus 142 ~liliDh~HFQyN~~----~lGlll~si~~l~~~~~----l~~av~F~~al~~K~--m~Ly~AP~~f~yLL 202 (245)
..+...+.+..+=.. .+=+++++...+.++|. ...|+.+++.+.. | ..+....+++.+++
T Consensus 66 y~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r~~~~lAl~~all~ls-Hll~~ll~~l~~~~~lL 135 (616)
T PF10131_consen 66 YHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYRYWILLALSMALLALS-HLLSTLLTGLALIVFLL 135 (616)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 988766666544333 22223455554443332 4556666655444 5 55666666666665
No 19
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=96.18 E-value=0.19 Score=48.58 Aligned_cols=88 Identities=22% Similarity=0.239 Sum_probs=67.0
Q ss_pred HHHHHHhcc--chhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHH
Q 026008 117 GVYRLTKNA--DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAA 194 (245)
Q Consensus 117 ~~~~~~~~~--~~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~A 194 (245)
.+++++|+. +++......+.+++||++.=..-.-|+-+++..-+++++++++.++|.....++..++++.|--.-...
T Consensus 76 pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ll~llvKEd~~l~v 155 (449)
T PF09852_consen 76 PLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFILWALLLLLVKEDLGLTV 155 (449)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHhhHHHHH
Confidence 346666665 345556668889999999875444555599998999999999999999999999999999997555555
Q ss_pred HHHHHHHHHH
Q 026008 195 PVYFVYLLRH 204 (245)
Q Consensus 195 P~~f~yLL~~ 204 (245)
-.+..+++-+
T Consensus 156 ~~~gl~~~~~ 165 (449)
T PF09852_consen 156 AGIGLYLLLR 165 (449)
T ss_pred HHHHHHHHHh
Confidence 5566666544
No 20
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=96.13 E-value=0.014 Score=55.56 Aligned_cols=76 Identities=24% Similarity=0.320 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 026008 155 GFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGP 234 (245)
Q Consensus 155 ~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~P 234 (245)
++-.-++-.++....++|+.+|+++|++|++.|-=.|.+||++++.+|.+-- -.+.+..+++ .++.-.+.-+|
T Consensus 159 ~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL~~~~------~~~tl~~L~v-~~~vQilvg~P 231 (429)
T KOG2762|consen 159 PFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLLQNLG------PIGTLLHLAV-CILVQILVGLP 231 (429)
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHHHhcc------HHHHHHHHHH-HHHHHHHHcCc
Confidence 4445556677788889999999999999999999999999999999888731 1234444443 33445666789
Q ss_pred Hhh
Q 026008 235 FLY 237 (245)
Q Consensus 235 Fl~ 237 (245)
|+.
T Consensus 232 FLl 234 (429)
T KOG2762|consen 232 FLL 234 (429)
T ss_pred hHh
Confidence 984
No 21
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.04 E-value=0.24 Score=48.22 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=78.6
Q ss_pred hhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhh
Q 026008 128 KRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCW 207 (245)
Q Consensus 128 ~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~ 207 (245)
+.+..+.+++++||+=+.---.-= |+....+.+++++.+.++++..++++|+++-...--++..+..+...+++....
T Consensus 142 ~~a~~a~ll~~~~PasiF~sa~Ys--Eslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~l~~~~~ 219 (443)
T PF04188_consen 142 KLALLAALLFIFSPASIFLSAPYS--ESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYELLGIYYL 219 (443)
T ss_pred HHHHHHHHHHHHccHHHHhhcCcc--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 334455778899999776544555 899899999999999999999999999999999999999999888888887543
Q ss_pred ccc-chhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 208 KGL-VRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 208 ~~~-~~~~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
+-. .+..++.++.....++..+++.+||+.
T Consensus 220 ~l~~~~~~~~~~~~~~~~~l~~~~i~~pf~~ 250 (443)
T PF04188_consen 220 DLRQLRRQRRLVRALISAILSGLLIFLPFVL 250 (443)
T ss_pred HHHhcchHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 200 112223344334444455677788874
No 22
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=95.78 E-value=1.1 Score=43.69 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHh-ccchhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHc----CC---
Q 026008 101 YFLRISVILSDLWLLYGVYRLTK-NADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQE----GK--- 172 (245)
Q Consensus 101 ~fmR~tVI~~Dl~~~~~~~~~~~-~~~~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~----~~--- 172 (245)
.-.|+...++=+++ +.++...+ ..+++...++++++.++|..+..++. ..-|..+..+.+++++++.+ ++
T Consensus 71 ~a~RL~~aL~g~~v-~l~~~~~r~~~~~~~al~AAllla~sp~~~~~sr~-~~~D~~l~~f~~lal~~l~r~~~~~~~~~ 148 (439)
T TIGR03663 71 ATARLLPAVFGVLL-PLTAWLYRKRLGDNEVLWAAVLLAFSPVMVYYSRF-MRNDIFVAFFTLLAVGAAFRYLDTGKRRY 148 (439)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHcCcHHHHHHHHHHHHhHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 46899666555553 33333333 34555555666777889999775543 23356677777777776542 22
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHH
Q 026008 173 DLMGGFLFAVLLCFKHLFAVAAPVY 197 (245)
Q Consensus 173 ~l~~av~F~~al~~K~m~Ly~AP~~ 197 (245)
.+.+++.+++++..|.....+.+.+
T Consensus 149 ~~lag~~~gLa~ltKg~~~l~~~~~ 173 (439)
T TIGR03663 149 LFLAASALALAFTSKENAYLIILIF 173 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2678999999999999866655443
No 23
>PF14897 EpsG: EpsG family
Probab=95.53 E-value=0.8 Score=40.96 Aligned_cols=140 Identities=15% Similarity=0.218 Sum_probs=83.0
Q ss_pred CCchhHhhhHHHHhccCCcccccccccccccCCCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHH
Q 026008 30 STDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVIL 109 (245)
Q Consensus 30 s~DfE~~R~WmeiT~~lp~~~WY~~~~s~W~lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~ 109 (245)
.+|+|...+..+-..+.... .++ .++-|.+.+..++.++++. |++. .+. +
T Consensus 22 g~D~~~Y~~~y~~~~~~~~~---~~~-----~~~E~~~~~l~~~~~~~~~--~~~~-----------------~~~---i 71 (330)
T PF14897_consen 22 GTDYYNYYEIYDEISNNSFN---FSE-----YGFEPGFYLLNYLFSYFGF--NYQF-----------------FFF---I 71 (330)
T ss_pred CccHHHHHHHHHHHhccccc---ccc-----ccCCHHHHHHHHHHHHHCC--CHHH-----------------HHH---H
Confidence 47999998887655443222 222 3677888888888766521 1111 111 2
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhh
Q 026008 110 SDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHL 189 (245)
Q Consensus 110 ~Dl~~~~~~~~~~~~~~~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m 189 (245)
.-.+.........++..++......+++.+.+... .......=+++..++.++|+..+.++|+..+-++..+|..+-..
T Consensus 72 ~~~i~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~S 150 (330)
T PF14897_consen 72 ISFISLFLFFFFIKKYSKNYPIFLSLFLFFSFFFF-FYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHYS 150 (330)
T ss_pred HHHHHHHHHHHhHHHcccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 22222333344444443332222222222233333 34455556888888999999999999988888888888888888
Q ss_pred HHHHHHHHHHH
Q 026008 190 FAVAAPVYFVY 200 (245)
Q Consensus 190 ~Ly~AP~~f~y 200 (245)
.+.+.|.++..
T Consensus 151 aii~l~~~~l~ 161 (330)
T PF14897_consen 151 AIIFLPLYFLS 161 (330)
T ss_pred HHHHHHHHHHH
Confidence 88888885433
No 24
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=95.49 E-value=0.38 Score=47.15 Aligned_cols=124 Identities=19% Similarity=0.303 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHhhhhhh------ccccchhhhhHHHHHHHHHHHHHH---c-
Q 026008 102 FLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWSPALVM------VDHLHFQYNGFLLGWLLLSISFLQ---E- 170 (245)
Q Consensus 102 fmR~tVI~~Dl~~~~~~~~~~~~~-~~~~~~~~~~~~llnP~lil------iDh~HFQyN~~~lGlll~si~~l~---~- 170 (245)
++=+.++.+|+..+ .++...|+. +++....+..+.++.|+... .|+. .+.++.+++.+.. +
T Consensus 141 ~~llNil~~~~si~-liy~i~k~lf~~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~-------~l~~~~l~l~~~~~~~~~ 212 (483)
T TIGR03766 141 FDVVNIVLVDLSAL-ILYKAVKKVFNKKKAFVALYLFVLLLALSPYILIPYTDTW-------VLPFVSLFLFLYTVISKK 212 (483)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHHhc
Confidence 34455666665552 234445544 44445555666677788533 4544 3444455544322 2
Q ss_pred CC-------hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHH
Q 026008 171 GK-------DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (245)
Q Consensus 171 ~~-------~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~ 233 (245)
++ .+.+|++.+++-.+|+..+.+.++.+.+++-....++.++++++.+..-.++++++++...
T Consensus 213 ~~~~~~~~~~Il~gillal~~~iKp~~iI~liA~~i~~~l~~~~~~~kk~~~~~~~~~~~~~~~~~~~~~ 282 (483)
T TIGR03766 213 TDLRKKIALSILLGVLLAIAYFIKPSAIIFVIAIFIVLFLQLLLENQKKKILKFTLVVLIFLLSFGITYS 282 (483)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 11 1578999999999999999999999999877543321112344443333334444444433
No 25
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.97 E-value=1.4 Score=45.61 Aligned_cols=146 Identities=15% Similarity=0.171 Sum_probs=94.6
Q ss_pred cccccccccccCCCCchHHHHHHHHhhhhhccCCcceeeccC--CccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccch
Q 026008 50 NWYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNG--LNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADV 127 (245)
Q Consensus 50 ~WY~~~~s~W~lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~--~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~~ 127 (245)
.+|.++..|-- +.||+-.-.-.+.|+++.+ |++.-- ++ ..|...--...||.---..--++.+.++.-.|..+.
T Consensus 71 S~Yl~~~ff~D-vHPPlgKmL~al~g~L~Gy-dG~f~f--~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~y~t~~~~~~ 146 (723)
T KOG3359|consen 71 SYYLNNIFFFD-VHPPLGKMLIALVGYLAGY-DGSFDF--QSIGEYYPNGVPYVGMRLFSALLGSLTVPLAYLTLKELGF 146 (723)
T ss_pred HHHhcCceeec-cCchHHHHHHHHHHHHhCC-CCCccc--cCCCccCCCCCchHhHHHHHHHHHhHHHHHHHHHHHHhcc
Confidence 34444443333 6799988888887777664 333211 22 233344566789988776666666777766666654
Q ss_pred hhHHHHHHHHHHhhhhhhccccchh------hhhHHHHHHHHHHHHHHc-----CCh---------hHHHHHHHHHhhhh
Q 026008 128 KRRYLIWVLIVWSPALVMVDHLHFQ------YNGFLLGWLLLSISFLQE-----GKD---------LMGGFLFAVLLCFK 187 (245)
Q Consensus 128 ~~~~~~~~~~llnP~liliDh~HFQ------yN~~~lGlll~si~~l~~-----~~~---------l~~av~F~~al~~K 187 (245)
+...+ ++.-.++++||+|=- -+++++.+...+++++.+ ++. +..|+.-+++++.|
T Consensus 147 s~~aa-----~l~allv~~dns~~T~sr~ILLDs~Llff~~~~~y~~~r~~~~~~~pfs~~W~~wL~~tGvsLgcaiSvK 221 (723)
T KOG3359|consen 147 SRLAA-----ALAALLVLFDNSLVTLSRFILLDSMLLFFMAAAVYCFVRFYTQRKRPFSLRWWKWLLLTGVSLGCAISVK 221 (723)
T ss_pred cHHHH-----HHHHHHHhhcccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhhheeehh
Confidence 43222 223334556777631 278999999999998764 222 56799999999999
Q ss_pred hhHHHHHHHHHHHHHHH
Q 026008 188 HLFAVAAPVYFVYLLRH 204 (245)
Q Consensus 188 ~m~Ly~AP~~f~yLL~~ 204 (245)
-+++..--....+...+
T Consensus 222 ~vGlft~~~Vgl~~v~~ 238 (723)
T KOG3359|consen 222 YVGLFTIALVGLYTVRE 238 (723)
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 99998777776665544
No 26
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=94.49 E-value=3.1 Score=38.95 Aligned_cols=117 Identities=19% Similarity=0.284 Sum_probs=75.4
Q ss_pred CCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhh
Q 026008 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPA 142 (245)
Q Consensus 63 YPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~llnP~ 142 (245)
|||+.=..+-+-=++|+.++.+- ......+|+...+.-.++.+.+++..++ .+ ...+.+.+.|-
T Consensus 95 y~p~~Ylp~alGi~ig~ll~l~~-----------~~~~~l~Rl~nll~~~~l~~~Ai~~~p~----~k-~l~~~i~l~Pm 158 (389)
T PF09913_consen 95 YPPLYYLPQALGIWIGRLLGLSV-----------LVMYYLGRLFNLLLYALLVYLAIKLAPR----GK-WLLALIALLPM 158 (389)
T ss_pred CCcHhhHHHHHHHHHHHHhCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHcch----hH-HHHHHHHHHHH
Confidence 99986555544335666666553 3556789999988888876655544321 12 33566777887
Q ss_pred hhhccccchhhhhHHHHHHHHHHHHHHc----CC-----hhHHHHHHHHHhhhhhhHHHHHHH
Q 026008 143 LVMVDHLHFQYNGFLLGWLLLSISFLQE----GK-----DLMGGFLFAVLLCFKHLFAVAAPV 196 (245)
Q Consensus 143 liliDh~HFQyN~~~lGlll~si~~l~~----~~-----~l~~av~F~~al~~K~m~Ly~AP~ 196 (245)
.+-. -.-+.|+++..+...+.++.+.+ ++ .+..++...+...-|..++-.++.
T Consensus 159 ~~~~-~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~~~~~~~~l~v~~~ll~~~K~~y~~l~~l 220 (389)
T PF09913_consen 159 TLFQ-AASVSYDGLIIALAFLFIALLLRLYRKKKITRRDLILLGVLAVLLALSKPPYIPLLLL 220 (389)
T ss_pred HHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5542 35678899999998888776654 11 255677777788899444444333
No 27
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=93.92 E-value=1.2 Score=45.83 Aligned_cols=142 Identities=16% Similarity=0.160 Sum_probs=92.1
Q ss_pred ccccccccccCCCCchHHHHHHHHhhhhhccCCcceeeccC--CccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccchh
Q 026008 51 WYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNG--LNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVK 128 (245)
Q Consensus 51 WY~~~~s~W~lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~--~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~~~ 128 (245)
=|.+++.+.-. +||+-++.-.+.|+++.. ||++-.- .. ..|.....-..||...-+.-.++.+.++..+|+.+.+
T Consensus 61 ~Yl~~~~~fDv-HPPL~kml~al~~~L~g~-~g~f~f~-~~g~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~~s 137 (699)
T COG1928 61 YYLNGTPFFDV-HPPLGKMLIALVGGLEGY-DPPFDFQ-LIGLTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIGYS 137 (699)
T ss_pred HhhcCCccccc-CCcHHHHHHHhhhhhhcc-CCCcccc-cCCcccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhcch
Confidence 34455545554 899999998888888763 4443221 12 3344445667899998877777777777777777655
Q ss_pred hHHHHHHHHHHhhhhhhccccchh------hhhHHHHHHHHHHHHHHc---CC---------hhHHHHHHHHHhhhhhhH
Q 026008 129 RRYLIWVLIVWSPALVMVDHLHFQ------YNGFLLGWLLLSISFLQE---GK---------DLMGGFLFAVLLCFKHLF 190 (245)
Q Consensus 129 ~~~~~~~~~llnP~liliDh~HFQ------yN~~~lGlll~si~~l~~---~~---------~l~~av~F~~al~~K~m~ 190 (245)
+... ++.-.+++.||.|.- -|++++.+.+.+++++.+ .+ .+..++.++++++.|-..
T Consensus 138 ~l~~-----~l~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r~~~~~p~s~~w~~~Ll~tGisLGcaiS~KwvG 212 (699)
T COG1928 138 RLVA-----ALAGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLRFHRQQPFSRRWLKWLLLTGISLGCAISVKWVG 212 (699)
T ss_pred HHHH-----HHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHhcceeeeEEEeeehh
Confidence 3332 122234456877752 278888888888888652 22 156789999999999998
Q ss_pred HHHHHHHHHH
Q 026008 191 AVAAPVYFVY 200 (245)
Q Consensus 191 Ly~AP~~f~y 200 (245)
+.-.-.+..+
T Consensus 213 lft~~~vgl~ 222 (699)
T COG1928 213 LFTTGVVGLL 222 (699)
T ss_pred HHHHHHHHHH
Confidence 7665444433
No 28
>PF14264 Glucos_trans_II: Glucosyl transferase GtrII
Probab=89.93 E-value=15 Score=33.39 Aligned_cols=90 Identities=21% Similarity=0.300 Sum_probs=55.3
Q ss_pred HHHHHHHhccchhh---HHHHHHHHHHhhhhhhccccchhhhhH--HHHHHH--HHHHHHHcCCh--hHHHHHHHHHhhh
Q 026008 116 YGVYRLTKNADVKR---RYLIWVLIVWSPALVMVDHLHFQYNGF--LLGWLL--LSISFLQEGKD--LMGGFLFAVLLCF 186 (245)
Q Consensus 116 ~~~~~~~~~~~~~~---~~~~~~~~llnP~liliDh~HFQyN~~--~lGlll--~si~~l~~~~~--l~~av~F~~al~~ 186 (245)
.+...+++..++++ .......+..||..+ ++.-|+|++. ++|+++ +|.++..+++. +.|+++-+++++.
T Consensus 62 ~s~~~~~~~~~~~~~~~~~l~~~~~~~~P~~~--~~lsy~~~s~~~~ls~~l~~la~~~~~k~~~~~~~~~~ll~~sl~~ 139 (319)
T PF14264_consen 62 LSAVLLVRLFDIKSSFISVLFSLLFISSPFFL--ENLSYRFDSLPMALSLLLAVLAFYFLKKSKIGFLISILLLVLSLGI 139 (319)
T ss_pred HHHHHHHHHhCccchHHHHHHHHHHHHhHHHH--HHHHHHHccHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 33344455443222 334466677899877 6777777754 555554 44445545443 4688899999999
Q ss_pred hhhHHHHHHHHHHHH-HHHHhh
Q 026008 187 KHLFAVAAPVYFVYL-LRHYCW 207 (245)
Q Consensus 187 K~m~Ly~AP~~f~yL-L~~~~~ 207 (245)
=|-..-..+...... +.++..
T Consensus 140 YQa~~~v~i~l~~~~~l~~~~~ 161 (319)
T PF14264_consen 140 YQASINVFISLVLIILLLDLLK 161 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 998887776666444 344433
No 29
>COG3463 Predicted membrane protein [Function unknown]
Probab=87.94 E-value=23 Score=34.93 Aligned_cols=86 Identities=20% Similarity=0.245 Sum_probs=64.0
Q ss_pred HHHHHhcc--chhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHH
Q 026008 118 VYRLTKNA--DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAP 195 (245)
Q Consensus 118 ~~~~~~~~--~~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP 195 (245)
.+.+++.. +++.+.+...++++||.+.=+----|+-..+..-++++|.+++.+|++....+.-++.+..|-+....+-
T Consensus 105 ~y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li~lvlIl~tk~~a~liiI 184 (458)
T COG3463 105 IYLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLIFLVLILLTKEDAFLIII 184 (458)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcccHHHHH
Confidence 35555554 3555667789999999876543333444888888899999999999999999999999999999666555
Q ss_pred HHHHHHHH
Q 026008 196 VYFVYLLR 203 (245)
Q Consensus 196 ~~f~yLL~ 203 (245)
-+.+++..
T Consensus 185 sl~i~~~~ 192 (458)
T COG3463 185 SLLIWLRL 192 (458)
T ss_pred HHHHHHHH
Confidence 55555533
No 30
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=87.73 E-value=28 Score=36.33 Aligned_cols=111 Identities=23% Similarity=0.293 Sum_probs=66.5
Q ss_pred ccc--CCCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHH----HHHHHHHHhcc-chhhH
Q 026008 58 PWT--LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWL----LYGVYRLTKNA-DVKRR 130 (245)
Q Consensus 58 ~W~--lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~----~~~~~~~~~~~-~~~~~ 130 (245)
-|| .||||+.-|.--+.+.+-+.+.|.+ .+..++..+.++ +++++...|+. +++..
T Consensus 80 P~G~~i~~~pl~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~~PailG~L~vI~vYl~~r~i~~~~~g 142 (773)
T COG1287 80 PPGSPIDFPPLFLYLTAALGLILGSIFPVS-----------------LETAALLFPAILGVLTVIPVYLLGRRILGDKTG 142 (773)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHccCchH-----------------HHHHHHHhhHHHhhHHHHHHHHHHHHHhcchhh
Confidence 466 9999999998888887766666632 334444555433 34567777776 55556
Q ss_pred HHHHHHHHHhhhhhh------ccccchhhhhHHHHHHHHHHHHHHc-----CChhHHHHHHHHHhhhh
Q 026008 131 YLIWVLIVWSPALVM------VDHLHFQYNGFLLGWLLLSISFLQE-----GKDLMGGFLFAVLLCFK 187 (245)
Q Consensus 131 ~~~~~~~llnP~lil------iDh~HFQyN~~~lGlll~si~~l~~-----~~~l~~av~F~~al~~K 187 (245)
..+.+++.+.|+.+- -||-=+ |-+..-++++.+....+ +|..+-+++.++++..=
T Consensus 143 ~~aa~ll~~~p~~~~rt~~G~~d~~~~--~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~~l~ 208 (773)
T COG1287 143 LLAALLLALAPGYLSRTVAGFYDTDMF--ELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLALGLL 208 (773)
T ss_pred HHHHHHHHHhhHHHHHhhcCccCCCch--HHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHH
Confidence 666778888888332 376555 55555554444443333 25544455544444443
No 31
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=87.04 E-value=28 Score=33.03 Aligned_cols=102 Identities=22% Similarity=0.189 Sum_probs=56.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc-cchhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHc--------
Q 026008 100 IYFLRISVILSDLWLLYGVYRLTKN-ADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQE-------- 170 (245)
Q Consensus 100 ~~fmR~tVI~~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~-------- 170 (245)
....|+..-+.=...-+..++..++ .+++.+....++.+.++..... ..+.==|++-..++++|++...+
T Consensus 81 ~~~~Rl~~~~~s~~~d~~~~~~~~~~~~~~~a~~~l~l~~~s~~~~~~-~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~ 159 (418)
T PF03901_consen 81 FYAPRLVLALLSALSDYYLYRLVKRLFGSSVALWALLLSLFSWFMFYY-SSRTLSNSFETILVLLALYLWLRSLSRSNSS 159 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhhhhHHHhhhHHHHh-hcccCccHHHHHHHHHHHHHHHHhhccCCCc
Confidence 4455665433222222333443333 3544455555666777776552 23433499999999999998875
Q ss_pred ---CCh-hHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 026008 171 ---GKD-LMGGFLFAVLLCFKHLFAVAAPVYFVYLL 202 (245)
Q Consensus 171 ---~~~-l~~av~F~~al~~K~m~Ly~AP~~f~yLL 202 (245)
++. ...+.+-+.++.+....+.+.-+...+.+
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl~l~~l 195 (418)
T PF03901_consen 160 SSSKRYLLAIGLLAGLAVFFRPTSALFWLPLGLYLL 195 (418)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233 44455555566676555544444444444
No 32
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=78.49 E-value=11 Score=36.83 Aligned_cols=107 Identities=15% Similarity=0.218 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhh
Q 026008 128 KRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCW 207 (245)
Q Consensus 128 ~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~ 207 (245)
+.+.-+.+++.+||+=|.-..+== |++.-.+.+.+++.+.+|+..-|+.+|+++=+..-+.+.-++-+-.-..+.. +
T Consensus 155 k~s~~a~liFcfnPAsIF~ts~YS--EsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~~~~~~~~~~~~-F 231 (444)
T KOG2647|consen 155 KISFYAALLFCFNPASIFLTAGYS--ESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSAGFLMHSQNRGF-F 231 (444)
T ss_pred hHHhhhhheeEecchHhhhhHHhh--HHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhHHHHhhhhccee-e
Confidence 444555788899999988666655 8888999999999999999889999999999999998887765543322211 1
Q ss_pred c-c--cchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 208 K-G--LVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 208 ~-~--~~~~~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
+ + ..++-+++.+.-.....+.+...+||..
T Consensus 232 ~~~L~~~~r~~~~~~~i~~~~l~~l~~~~p~~~ 264 (444)
T KOG2647|consen 232 IFSLTMLNRLRQLFKQIVSLFLSILTFLLPLAA 264 (444)
T ss_pred eeehHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 0112334444444445556677788763
No 33
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=75.71 E-value=1e+02 Score=31.87 Aligned_cols=188 Identities=18% Similarity=0.224 Sum_probs=98.9
Q ss_pred cCCchhHh--------hhHHHHhccCCcccccccccccccCCCCchHHHHH-HHHhhhhhccCCcceeeccCCccCCcch
Q 026008 29 HSTDFEVH--------RHWLALTHSLPLSNWYADETSPWTLDYPPFFACFE-RFLSIFAHYIDPQIVDLHNGLNYRANSA 99 (245)
Q Consensus 29 ~s~DfE~~--------R~WmeiT~~lp~~~WY~~~~s~W~lDYPPl~ay~~-~l~g~ia~~~~p~~~~l~~~~~~~s~~~ 99 (245)
..+|...| |||+. ..+.|.-+|...- |-|..+..+|-. --...+.-.+..+.
T Consensus 27 ~~~D~~~Q~~~f~~~l~~~l~-~~~~~~~s~~~gl----G~~~~~~~~yY~~sPf~ll~~lfp~~~-------------- 87 (843)
T PF09586_consen 27 LSGDGNSQYIPFYEYLRDWLL-GGGSPFYSWSNGL----GGDFFGTFSYYLGSPFNLLSLLFPASQ-------------- 87 (843)
T ss_pred EeccCHHHHHHHHHHHHHHHh-cCCCCcccccccC----CcchHhHHHHHhcCHHHHHHHHcchhh--------------
Confidence 36899888 88886 5566877885533 345555444421 00001111122121
Q ss_pred hhhHHHHHHHHHHHH-HHHHHHHHhccch----hhHHHHHHHHHHhhhhhhc-cccchhhhhH-HHHHHHHHHHHHH-cC
Q 026008 100 IYFLRISVILSDLWL-LYGVYRLTKNADV----KRRYLIWVLIVWSPALVMV-DHLHFQYNGF-LLGWLLLSISFLQ-EG 171 (245)
Q Consensus 100 ~~fmR~tVI~~Dl~~-~~~~~~~~~~~~~----~~~~~~~~~~llnP~lili-Dh~HFQyN~~-~lGlll~si~~l~-~~ 171 (245)
.-..-..+++.-+.+ -.+.+.++|+..+ ..+.+..+++.++=-++.- =|.+| -|++ ++=++++++-.+. ++
T Consensus 88 ~~~~~~~~~~lk~~lag~~~~~~l~~~~~~~~~~~~~i~s~~Yafsg~~~~~~~~~~f-ld~~i~lPL~llgie~~~~~~ 166 (843)
T PF09586_consen 88 MPYAILLLIILKIGLAGLFFYLYLRKFKKSRSDWAALIGSLLYAFSGYVIYYSFNIMF-LDAMILLPLLLLGIERLLKEK 166 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHhcC
Confidence 111222223333333 2244566666532 3345557777777555552 23444 3444 4455677777544 44
Q ss_pred Ch--hHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 172 KD--LMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKG---LVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 172 ~~--l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~---~~~~~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
|. +..++..++..|+ -++.+.+...+.|.+-+++.++ ..+.+.|++.-+++.++..++.++|.+.
T Consensus 167 k~~~~~~~~~l~~i~nf-Yf~ym~~if~~iY~~~r~~~~~~k~~~~~~~~~~~~~ilg~~lsa~~llP~~~ 236 (843)
T PF09586_consen 167 KWWLFIISLALALISNF-YFAYMICIFLVIYFLIRYFFKNWKNFFKKILRFIGSSILGVGLSAFLLLPTIL 236 (843)
T ss_pred CcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 2334444444444 2334445666666666664221 2235567777788888888999999884
No 34
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=75.64 E-value=74 Score=30.46 Aligned_cols=86 Identities=22% Similarity=0.313 Sum_probs=41.4
Q ss_pred CCCCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHH
Q 026008 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVW 139 (245)
Q Consensus 61 lDYPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~-~~~~~~~~~~~~ll 139 (245)
.+|||+.-+......++.....+ . +... +..-++.+++=+.+ ..++.+.|+. +++...+++++..+
T Consensus 68 i~~~pl~~~l~~~~~~~~~~~~~--~---------~l~~-v~~~~ppvl~~L~v-i~~y~~~~~~~~~~~Gl~aA~l~a~ 134 (483)
T PF02516_consen 68 IDWPPLFPYLTAAFYAILGGFGP--V---------SLYE-VAFWLPPVLGALTV-IPVYLLGRRLGGRKAGLLAAFLLAI 134 (483)
T ss_dssp --TT-HHHHHHHHHHHS-SS-HH---------------H-HHHHHHHHHGGGGH-HHHHHHHHHTT-HHHHHHHHHHHTT
T ss_pred cCcccHHHHHHHHHHHHHHHhcc--h---------hHHH-HHHHHHHHHHHHHH-HHHHHHHHHhCCCchHHHHHHHHHH
Confidence 68999998884444444222222 0 1111 12233444444433 3455566776 45555666788888
Q ss_pred hhhhhh------ccccchhhhhHHHHHH
Q 026008 140 SPALVM------VDHLHFQYNGFLLGWL 161 (245)
Q Consensus 140 nP~lil------iDh~HFQyN~~~lGll 161 (245)
.|+.+- .||-=+ |-++..+.
T Consensus 135 ~p~~l~RT~~G~~D~~~~--~~~f~~l~ 160 (483)
T PF02516_consen 135 SPGYLSRTMAGFYDHHML--ELFFPLLI 160 (483)
T ss_dssp SHHHHHTSSTT--SGGGG--TTHHHHHH
T ss_pred hHHHHHHhcCCCcccchH--HHHHHHHH
Confidence 999554 466555 44443333
No 35
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=69.35 E-value=57 Score=31.63 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhhhhhc------cccchhhhhHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhhhhHHHHHHHH
Q 026008 131 YLIWVLIVWSPALVMV------DHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVY 197 (245)
Q Consensus 131 ~~~~~~~llnP~lili------Dh~HFQyN~~~lGlll~si~~l~~~~~l~~av~F~~al~~K~m~Ly~AP~~ 197 (245)
.+++++.++-|.+--. | +|- -++..++++++..+|.++|++.-+++-..|.-.-..-|.+
T Consensus 187 ~~aA~~~alDp~l~amg~VAMLD-Ihv------aFFtaL~~~fl~~~R~l~sgiAlGLAAs~K~SG~~vfpil 252 (438)
T COG4346 187 LIAALLAALDPLLRAMGGVAMLD-IHV------AFFTALFMYFLANDRPLWSGIALGLAASVKLSGAFVFPIL 252 (438)
T ss_pred HHHHHHHhhCcHHHHhcchhHHH-HHH------HHHHHHHHHHHhcCCeehHHHHHHHHHHHhhcccchHHHH
Confidence 4456677778876542 3 343 3456788999999999999999999999999887644444
No 36
>PHA01514 O-antigen conversion protein C
Probab=68.86 E-value=1.3e+02 Score=30.08 Aligned_cols=157 Identities=13% Similarity=0.220 Sum_probs=83.4
Q ss_pred ccchHHHHHHHHHH--HHHHHHHhccccCCchhHhhhHHHHhccCCcccccccccccccCCCCchHHHHHHHHhhhhhcc
Q 026008 4 SSSTRQLLWFFAIA--VCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAHYI 81 (245)
Q Consensus 4 ~~~~~~~~w~~~~~--~~~k~ll~p~y~s~DfE~~R~WmeiT~~lp~~~WY~~~~s~W~lDYPPl~ay~~~l~g~ia~~~ 81 (245)
..||+...++++++ ..+=+++...|+-.|.+. ++| +-..|..++ =|+..+..++++-=.+..
T Consensus 5 ~~d~~~~~~~l~~~liyi~PLlla~~~YiDD~~R-----si~---G~~gW~~~G--------RPlad~l~~~L~~g~~~~ 68 (485)
T PHA01514 5 SNDRIFISIFLGLAIIYTFPLLTHQSFFVDDLGR-----SLY---GGLGWSGNG--------RPLSDFIFYIINFGTPII 68 (485)
T ss_pred chhHHHHHHHHHHHHHHHHHHHcCCCcccccHhH-----Hhc---CcCChhhcC--------chHHHHHHHHHcCCCCcc
Confidence 45566666655443 445566666777788876 333 334454443 477777777765211111
Q ss_pred CCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhcc-chh--hHHHHHHHHHHhhhhhhccccchhhhhHHH
Q 026008 82 DPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVK--RRYLIWVLIVWSPALVMVDHLHFQYNGFLL 158 (245)
Q Consensus 82 ~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~-~~~--~~~~~~~~~llnP~liliDh~HFQyN~~~l 158 (245)
| + ++ ++.|++=.++..+...+.++. +++ ......+.++.||-.+ -|..++|+|...
T Consensus 69 D-----i-------~P-------LpliLs~~~ls~a~~~l~~~~f~~~~~~~~L~~~~l~~NPffL--qNLSYrfDsl~M 127 (485)
T PHA01514 69 D-----A-------SP-------LPLMLGIVILALALSCIREKLFGDDYITASLCFMMILANPFFI--ENLSYRYDSLTM 127 (485)
T ss_pred c-----c-------cc-------HHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHhCHHHH--hhhhhccCcHHH
Confidence 1 1 11 233343333333322222222 222 2233455566799876 899999998776
Q ss_pred HHHHHHHH----HHHcCCh---hHHHHHHHHHhhhhhhHHHHHHHH
Q 026008 159 GWLLLSIS----FLQEGKD---LMGGFLFAVLLCFKHLFAVAAPVY 197 (245)
Q Consensus 159 Glll~si~----~l~~~~~---l~~av~F~~al~~K~m~Ly~AP~~ 197 (245)
++.+.... +..+++. +.++++=.++++.=|-..-.-..+
T Consensus 128 alsv~lsi~~~~l~~~~~~~~~~~~~il~~~~l~lYQ~s~nIfi~l 173 (485)
T PHA01514 128 CMSVAISIISSYVAYQYKPINIIISSILTIAFLSLYQAALNTYAIF 173 (485)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66543222 3234333 456666666888888777655443
No 37
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=54.53 E-value=1.4e+02 Score=25.67 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=43.7
Q ss_pred ccccchh--------hhhHHHHHHHHHHHHHHcC-------Ch-hHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 026008 146 VDHLHFQ--------YNGFLLGWLLLSISFLQEG-------KD-LMGGFLFAVLLCFKHLFAVAAPVYFVYLLRH 204 (245)
Q Consensus 146 iDh~HFQ--------yN~~~lGlll~si~~l~~~-------~~-l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~ 204 (245)
.|..+|| -|.++.++++|.+....++ |+ +++|.+.+++++.-++.++..|++...+.-+
T Consensus 95 S~sfW~~Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~~~~~~ 169 (178)
T PF11028_consen 95 SDSFWFQAVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPAIALLYFFK 169 (178)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666664 4667777777777766543 23 6789999999999999999999988765433
No 38
>PF10067 DUF2306: Predicted membrane protein (DUF2306); InterPro: IPR018750 Members of this family of hypothetical bacterial proteins have no known function.
Probab=50.84 E-value=22 Score=27.59 Aligned_cols=16 Identities=19% Similarity=0.515 Sum_probs=13.0
Q ss_pred cCCchhHhhhHHHHhc
Q 026008 29 HSTDFEVHRHWLALTH 44 (245)
Q Consensus 29 ~s~DfE~~R~WmeiT~ 44 (245)
+-+|++.||+||--+.
T Consensus 64 r~~~i~~Hr~wM~rsy 79 (103)
T PF10067_consen 64 RRGRIAAHRRWMIRSY 79 (103)
T ss_pred HhCCHHHHHHHHHHHH
Confidence 4699999999996543
No 39
>KOG2515 consensus Mannosyltransferase [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.17 E-value=4.3e+02 Score=26.81 Aligned_cols=148 Identities=15% Similarity=0.276 Sum_probs=94.0
Q ss_pred hHhhhHHHHhccCCcc-cccccccccccCCCCchHHHHHHHH-------h-hhhhccCCcceeeccCCccCCcchhhhHH
Q 026008 34 EVHRHWLALTHSLPLS-NWYADETSPWTLDYPPFFACFERFL-------S-IFAHYIDPQIVDLHNGLNYRANSAIYFLR 104 (245)
Q Consensus 34 E~~R~WmeiT~~lp~~-~WY~~~~s~W~lDYPPl~ay~~~l~-------g-~ia~~~~p~~~~l~~~~~~~s~~~~~fmR 104 (245)
|+..-|= |+. =-|-++-+-| .|-|-+|-=||.. | -.|..++++-+.+ -.+.|
T Consensus 39 EvfNYWE------PLHyllyG~GfQTW--EYSP~yaiRSy~Yillh~~pg~~~a~~fg~~ki~v-----------Fy~vR 99 (568)
T KOG2515|consen 39 EVFNYWE------PLHYLLYGEGFQTW--EYSPEYAIRSYAYILLHYVPGYFVAKLFGLSKILV-----------FYFVR 99 (568)
T ss_pred hhhhcch------hhhhHhhcccccce--eeCchhHHHHHHHHHHHHcchHHHHHhcCCCceEe-----------ehHHH
Confidence 6666663 333 1233455534 6999888766653 2 2344556554332 34567
Q ss_pred HHHHHHHHHH-HHHHHHHHhccchhhHHHHHHHHHHhhhhhhccccchhhhhHHHHHHHHHHHHHHcCChh--HHHHHHH
Q 026008 105 ISVILSDLWL-LYGVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDL--MGGFLFA 181 (245)
Q Consensus 105 ~tVI~~Dl~~-~~~~~~~~~~~~~~~~~~~~~~~llnP~liliDh~HFQyN~~~lGlll~si~~l~~~~~l--~~av~F~ 181 (245)
+..=..-.+. .+.....+|+.++.......++.++|+|-.. ...-|=--++..-+...|......+|+. .+.+.++
T Consensus 100 ~~Lg~fsai~E~~l~~ai~~kf~~~ia~~~i~f~~fssGmF~-aStafLPSSF~M~~~~~al~a~l~~n~~~av~~~a~g 178 (568)
T KOG2515|consen 100 LCLGFFSAIMETYLYKAICRKFGLAIARIWIIFLLFSSGMFH-ASTAFLPSSFAMYLTVLALGAWLTENYTKAVAYVAIG 178 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccee-eechhcchHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 7654333333 4455667788877776666778889999886 4566766777777777777777777774 4456667
Q ss_pred HHhhhhhhHHHHHHHHHHHH
Q 026008 182 VLLCFKHLFAVAAPVYFVYL 201 (245)
Q Consensus 182 ~al~~K~m~Ly~AP~~f~yL 201 (245)
..++--.-.+.-.|...--+
T Consensus 179 ailGWPFsa~l~lPi~~~ll 198 (568)
T KOG2515|consen 179 AILGWPFSALLGLPILLELL 198 (568)
T ss_pred HHhccHHHHHHhhHHHHHHH
Confidence 77888888888888444333
No 40
>COG5305 Predicted membrane protein [Function unknown]
Probab=33.65 E-value=5.3e+02 Score=26.30 Aligned_cols=132 Identities=20% Similarity=0.117 Sum_probs=70.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHhhhhhhccccchhhhhH----HHHHHHHHHHHHH---
Q 026008 98 SAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWSPALVMVDHLHFQYNGF----LLGWLLLSISFLQ--- 169 (245)
Q Consensus 98 ~~~~fmR~tVI~~Dl~~~~~~~~~~~~~-~~~~~~~~~~~~llnP~liliDh~HFQyN~~----~lGlll~si~~l~--- 169 (245)
.+...+|..--+.-.+.++.++.++|.+ +++....+..+...+|--+- .-.|.= +....++|..++.
T Consensus 114 ~s~~~~Rsls~L~~~~ai~~~y~l~r~l~~~~~a~la~~~~AisP~~i~-----~~qe~R~y~L~~~~~lis~~~Ll~ai 188 (552)
T COG5305 114 NSLLASRSLSALLSALAIPLVYWLGRELFGSTTALLAAALMAISPFHIF-----YSQEARSYALAVATTLISATLLLRAI 188 (552)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHccChHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566789866555566666777777765 45444555666677786543 333332 3333455555553
Q ss_pred ----cCC----hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 170 ----EGK----DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 170 ----~~~----~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
.+| ++.-++.-++++..=-...+.+++-+.++.- |.+.+.++-.++.+....+.+.+++. +||+.
T Consensus 189 ~~~~~r~~l~~wliy~~~~~lsllt~~f~~~~v~A~~~~v~l--~~~~~~~~~~~l~~~l~~~~~~~~a~-lpwl~ 261 (552)
T COG5305 189 RLPTSRKLLPGWLIYALLLILSLLTHYFFALTVIAHGVYVLL--WASLKNRQSLFLIWWLLATAAGLLAF-LPWLL 261 (552)
T ss_pred cCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhhhhhHHHHHHHHHHHHHHHHH-HHHHH
Confidence 344 4444555555555555666667777776654 22211111111455555555444444 77763
No 41
>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels. The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.
Probab=28.31 E-value=1.7e+02 Score=28.66 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=19.4
Q ss_pred ChhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcc
Q 026008 172 KDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKG 209 (245)
Q Consensus 172 ~~l~~av~F~~al~~K~m~Ly~AP~~f~yLL~~~~~~~ 209 (245)
++.+.|+.|..++..= ..+...-...+|++.+||.++
T Consensus 33 ~~Y~~Sv~~~a~iaav-wlil~ll~ll~~~~~~CCcr~ 69 (418)
T cd07912 33 EIYQQSLLILASIPAA-CLILSLLFLLVYLITRCCDRK 69 (418)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccCCC
Confidence 3344455554443222 122344556677788887654
No 42
>PF07281 INSIG: Insulin-induced protein (INSIG)
Probab=26.76 E-value=4.3e+02 Score=23.05 Aligned_cols=93 Identities=17% Similarity=0.217 Sum_probs=53.9
Q ss_pred CCchHHHHHHHHhhhhhccCCcceeeccCCccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhh
Q 026008 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPA 142 (245)
Q Consensus 63 YPPl~ay~~~l~g~ia~~~~p~~~~l~~~~~~~s~~~~~fmR~tVI~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~llnP~ 142 (245)
|||++...--++|-+-..+|--+-+- ++++-..+.-.-.+|..... +++.+++.++- -....+...++.++||+
T Consensus 46 vp~~~G~agv~~G~l~P~lD~~~~~~-~~~~~~~~~w~~v~R~i~~F--vGi~~airkl~---w~s~~Q~s~~lalln~~ 119 (193)
T PF07281_consen 46 VPPLWGLAGVLLGLLLPWLDSFLGES-KPRSSRKPDWSSVLRSIGAF--VGISFAIRKLP---WSSSLQASITLALLNPG 119 (193)
T ss_pred hhHHHHHHHHHHHhhHHHHHHhcccc-cccCCccccHHHHHHHHHHH--HHHHHHHhhCC---CCcHHHHHHHHHHHHHH
Confidence 89999988888888877776442110 11222333444557776554 33434443321 11223555688899999
Q ss_pred hhh-ccccchhhhhHHHHHHHHH
Q 026008 143 LVM-VDHLHFQYNGFLLGWLLLS 164 (245)
Q Consensus 143 lil-iDh~HFQyN~~~lGlll~s 164 (245)
+=. .|... .|+.++..+.-
T Consensus 120 LW~lfDrT~---sGf~ls~~va~ 139 (193)
T PF07281_consen 120 LWWLFDRTR---SGFLLSTAVAL 139 (193)
T ss_pred HHHHhCCch---hHHHHHHHHHH
Confidence 866 68643 56666665533
No 43
>PHA03235 DNA packaging protein UL33; Provisional
Probab=25.45 E-value=1.2e+02 Score=29.01 Aligned_cols=22 Identities=23% Similarity=0.393 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 026008 215 SRLSVLGAVVVAVFAAAYGPFL 236 (245)
Q Consensus 215 ~~l~~lg~~vi~tf~l~f~PFl 236 (245)
+|.++..++++++|+++|+|+.
T Consensus 240 ~k~~~~v~iivv~F~iCWlPy~ 261 (409)
T PHA03235 240 SRTLTFVCILLLSFLCLQTPFV 261 (409)
T ss_pred hhhhhhHHHHHHHHHHHHhHHH
Confidence 4566777777888999999986
No 44
>PHA03234 DNA packaging protein UL33; Provisional
Probab=24.27 E-value=73 Score=29.61 Aligned_cols=24 Identities=8% Similarity=0.108 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Q 026008 213 GFSRLSVLGAVVVAVFAAAYGPFL 236 (245)
Q Consensus 213 ~~~~l~~lg~~vi~tf~l~f~PFl 236 (245)
+-+|.++..++++++|+++|+|+-
T Consensus 231 ~~~k~~k~i~~vv~vF~iCWlPy~ 254 (338)
T PHA03234 231 KHKKTLFFIRILILSFLCIQIPNI 254 (338)
T ss_pred hhhhhhhHHHHHHHHHHHHHhHHH
Confidence 457889999999999999999995
No 45
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=20.87 E-value=1.3e+02 Score=20.04 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 026008 214 FSRLSVLGAVVVAVFAAAYGPFLY 237 (245)
Q Consensus 214 ~~~l~~lg~~vi~tf~l~f~PFl~ 237 (245)
..-.+.+.++++.+.+.+++|++.
T Consensus 16 k~a~~gl~il~~~vl~ai~~p~~~ 39 (56)
T PF12911_consen 16 KLAVIGLIILLILVLLAIFAPFIS 39 (56)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcC
Confidence 344666777777778889999986
Done!