Query 026010
Match_columns 245
No_of_seqs 31 out of 33
Neff 2.7
Searched_HMMs 46136
Date Fri Mar 29 02:39:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026010.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026010hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK06764 hypothetical protein; 78.7 2.5 5.5E-05 34.5 3.4 65 62-128 24-97 (105)
2 PF08097 Toxin_26: Conotoxin T 61.4 2.6 5.7E-05 22.5 -0.0 9 218-226 3-11 (11)
3 PF08669 GCV_T_C: Glycine clea 32.8 61 0.0013 23.9 3.3 31 101-132 64-94 (95)
4 smart00683 DM16 Repeats in sea 32.1 28 0.0006 25.6 1.4 19 91-109 9-27 (55)
5 COG1254 AcyP Acylphosphatases 28.5 26 0.00056 27.7 0.8 36 115-154 26-61 (92)
6 PRK11857 dihydrolipoamide acet 20.1 83 0.0018 29.3 2.4 55 103-166 221-282 (306)
7 COG1465 Predicted alternative 20.0 89 0.0019 30.7 2.7 59 80-144 273-341 (376)
8 PF13344 Hydrolase_6: Haloacid 19.9 56 0.0012 25.1 1.1 18 117-134 1-19 (101)
9 PF09871 DUF2098: Uncharacteri 18.8 94 0.002 24.8 2.2 34 98-131 13-46 (91)
10 COG3204 Uncharacterized protei 17.9 1.8E+02 0.0038 28.3 4.1 45 73-127 248-299 (316)
No 1
>PRK06764 hypothetical protein; Provisional
Probab=78.72 E-value=2.5 Score=34.55 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=44.4
Q ss_pred hcCCCCCcccceeeccccccceeeeee------cCcccc-ccCCccccc--eEEecCCCCCCcceEEeecceeeee
Q 026010 62 SMLNVSTSTLPLVMSEKLQRTKALVEC------EGESVD-LSGDMGAVG--RILVPGTAEGNHEMFLDLKGTIYKT 128 (245)
Q Consensus 62 ~~~~vs~~~lPLvlp~kv~rtk~LvE~------eG~slD-LsGD~GAVG--Rl~V~~~~~~~~~L~LDLKG~iY~a 128 (245)
-+|++|..+.|-+--+++|.-.+.+-. .|.||| ||||.-||- ...+.=.. -...++-..|+||+-
T Consensus 24 lepsvs~ae~~q~~~enfn~i~v~mn~~e~y~lsgrsidilsgdkeaiqlnkyti~f~k--pg~yvirvngciy~d 97 (105)
T PRK06764 24 LEPSVSAAESQQVKEENFNAIDVSMNINELYVLSGRSIDVLSGDKEAIQLNKYTIRFSK--PGKYVIRVNGCIYND 97 (105)
T ss_pred eccccchhcchhhhhcccceEEEEEeccceEEEcCceeeeecCChhheEeeeeEEEecC--CccEEEEEccEEeee
Confidence 368888888998888888755554443 367998 799999874 22232211 235667788999874
No 2
>PF08097 Toxin_26: Conotoxin T-superfamily; InterPro: IPR012631 This family consists of the T-superfamily of conotoxins. Eight different T-superfamily peptides from five Conus species were identified. These peptides share a consensus signal sequence, and a conserved arrangement of cysteine residues. T-superfamily peptides were found expressed in venom ducts of all major feeding types of Conus, suggesting that the T-superfamily is a large and diverse group of peptides, widely distributed in the 500 different Conus species [].; GO: 0005576 extracellular region
Probab=61.41 E-value=2.6 Score=22.48 Aligned_cols=9 Identities=56% Similarity=1.531 Sum_probs=8.3
Q ss_pred Ccchhhhhh
Q 026010 218 CRKERYECW 226 (245)
Q Consensus 218 ~~~~r~~~~ 226 (245)
|.+-||-||
T Consensus 3 cpviryccw 11 (11)
T PF08097_consen 3 CPVIRYCCW 11 (11)
T ss_pred cchhheecC
Confidence 788999999
No 3
>PF08669 GCV_T_C: Glycine cleavage T-protein C-terminal barrel domain; InterPro: IPR013977 This entry shows glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase. ; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 3GIR_A 1WOO_A 1WOS_A 1WOR_A ....
Probab=32.76 E-value=61 Score=23.94 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=20.8
Q ss_pred ccceEEecCCCCCCcceEEeecceeeeeEEec
Q 026010 101 AVGRILVPGTAEGNHEMFLDLKGTIYKTTLVP 132 (245)
Q Consensus 101 AVGRl~V~~~~~~~~~L~LDLKG~iY~atIVP 132 (245)
|+|.|-...... ...|.+++.|..|.|+|++
T Consensus 64 ala~v~~~~~~~-g~~l~v~~~g~~~~a~v~~ 94 (95)
T PF08669_consen 64 ALAYVDREYAEP-GTELEVEIRGKRVPATVVK 94 (95)
T ss_dssp EEEEEEGGGGST-TSEEEEEETTEEEEEEEE-
T ss_pred EEEEECHHHcCC-CCEEEEEECCEEEEEEEeC
Confidence 345554333222 4689999999999999986
No 4
>smart00683 DM16 Repeats in sea squirt COS41.4, worm R01H10.6, fly CG1126 etc.
Probab=32.11 E-value=28 Score=25.63 Aligned_cols=19 Identities=26% Similarity=0.457 Sum_probs=16.8
Q ss_pred ccccccCCccccceEEecC
Q 026010 91 ESVDLSGDMGAVGRILVPG 109 (245)
Q Consensus 91 ~slDLsGD~GAVGRl~V~~ 109 (245)
+--|++||.|-.|+++|.+
T Consensus 9 ~Ved~kgn~G~~G~l~VTN 27 (55)
T smart00683 9 GVEDTKGNNGDLGVFFVTN 27 (55)
T ss_pred CeEecCCCCCCeeEEEEEe
Confidence 4569999999999999975
No 5
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=28.48 E-value=26 Score=27.65 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=29.7
Q ss_pred cceEEeecceeeeeEEecCccEEEEeecCCchhhhheecc
Q 026010 115 HEMFLDLKGTIYKTTLVPSRTFCIVSFGHSEAKIEAIMND 154 (245)
Q Consensus 115 ~~L~LDLKG~iY~atIVPs~T~~VVsvg~tEAKVEai~nd 154 (245)
.++.|+|+|.++| +|-+++=||..|++++ |+.+.+.
T Consensus 26 ~A~~lgl~G~V~N---~~DGsVeiva~G~~~~-v~~~~~~ 61 (92)
T COG1254 26 EALRLGLTGWVKN---LDDGSVEIVAEGPDEA-VEKFIEW 61 (92)
T ss_pred HHHHCCCEEEEEE---CCCCeEEEEEEcCHHH-HHHHHHH
Confidence 5778999999887 6778999999999999 7765543
No 6
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=20.07 E-value=83 Score=29.34 Aligned_cols=55 Identities=11% Similarity=0.207 Sum_probs=38.0
Q ss_pred ceEEecCCCCCCcceEEeecceeeeeEEecCccEEEEeecCCchhhhheecc-------ceeeecCcchhh
Q 026010 103 GRILVPGTAEGNHEMFLDLKGTIYKTTLVPSRTFCIVSFGHSEAKIEAIMND-------FIQLKPQSNVYE 166 (245)
Q Consensus 103 GRl~V~~~~~~~~~L~LDLKG~iY~atIVPs~T~~VVsvg~tEAKVEai~nd-------FiqLr~~~~~~e 166 (245)
|-|.|.+ -|+. |..|-+-|++-+-.|++.+|.-+-+....-.+ .+-|.+++++.|
T Consensus 221 gTfTISN-----lG~~----G~~~~tpiIn~pq~aILgvG~i~~~pvv~~g~i~~r~~m~lslt~DHRviD 282 (306)
T PRK11857 221 GSFTITN-----YGSV----GSLYGVPVINYPELAIAGVGAIIDKAIVKNGQIVAGKVMHLTVAADHRWID 282 (306)
T ss_pred ccEEEeC-----CCCC----CccceecccCCCccceeecccceEEeEEECCEEEEeeeeEEeEecchhhhC
Confidence 6777773 4443 77888889999999999999987665432112 245667777544
No 7
>COG1465 Predicted alternative 3-dehydroquinate synthase [Amino acid transport and metabolism]
Probab=20.04 E-value=89 Score=30.69 Aligned_cols=59 Identities=27% Similarity=0.444 Sum_probs=39.3
Q ss_pred ccceeeeeec-Cc---cccccCC--ccccceEEecCCCCCCcceEE---eecceeeeeEEecCc-cEEEEeecCC
Q 026010 80 QRTKALVECE-GE---SVDLSGD--MGAVGRILVPGTAEGNHEMFL---DLKGTIYKTTLVPSR-TFCIVSFGHS 144 (245)
Q Consensus 80 ~rtk~LvE~e-G~---slDLsGD--~GAVGRl~V~~~~~~~~~L~L---DLKG~iY~atIVPs~-T~~VVsvg~t 144 (245)
++|+.|.||. |+ -+|..|- ++.|||+-++. ++|.| -..|..-+ +|+--+ |+-+|+-..+
T Consensus 273 ~kTkYLaEL~aGDeV~iVD~dGr~R~aiVGRvKIEr-----RPl~lIeAey~g~~i~-tiLQNAETIkLv~~dG~ 341 (376)
T COG1465 273 GKTKYLAELKAGDEVLIVDFDGRTRSAIVGRVKIER-----RPLMLIEAEYEGVEIS-TILQNAETIKLVNPDGE 341 (376)
T ss_pred CceEEhhhhcCCCeEEEEecCCceeEEEEEEEEeec-----CceEEEEEEecCcEEE-EEeccceeEEEEcCCCc
Confidence 5999999999 43 6788886 47899999995 55553 23344333 344444 7777665444
No 8
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=19.87 E-value=56 Score=25.07 Aligned_cols=18 Identities=28% Similarity=0.767 Sum_probs=13.5
Q ss_pred eEEeecceeee-eEEecCc
Q 026010 117 MFLDLKGTIYK-TTLVPSR 134 (245)
Q Consensus 117 L~LDLKG~iY~-atIVPs~ 134 (245)
+.+||-||+|+ .+.+|.+
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 47999999999 4677753
No 9
>PF09871 DUF2098: Uncharacterized protein conserved in archaea (DUF2098); InterPro: IPR019209 This family of proteins have no known function.
Probab=18.75 E-value=94 Score=24.81 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=27.6
Q ss_pred CccccceEEecCCCCCCcceEEeecceeeeeEEe
Q 026010 98 DMGAVGRILVPGTAEGNHEMFLDLKGTIYKTTLV 131 (245)
Q Consensus 98 D~GAVGRl~V~~~~~~~~~L~LDLKG~iY~atIV 131 (245)
-+|.+|+++.-...++..=++||--+.-|++..+
T Consensus 13 ~TGT~G~V~diK~ed~~~wv~LD~t~L~Yr~~~L 46 (91)
T PF09871_consen 13 NTGTVGKVVDIKEEDGETWVLLDSTDLYYRPDYL 46 (91)
T ss_pred CCCeEEEEEEEEEeCCCeEEEEccCCceeeccee
Confidence 3788899887766677788899999999998654
No 10
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=17.86 E-value=1.8e+02 Score=28.30 Aligned_cols=45 Identities=27% Similarity=0.512 Sum_probs=29.9
Q ss_pred eeeccccccceeeeeecCccccccCCccccceEEecCCCC-------CCcceEEeecceeee
Q 026010 73 LVMSEKLQRTKALVECEGESVDLSGDMGAVGRILVPGTAE-------GNHEMFLDLKGTIYK 127 (245)
Q Consensus 73 Lvlp~kv~rtk~LvE~eG~slDLsGD~GAVGRl~V~~~~~-------~~~~L~LDLKG~iY~ 127 (245)
|||++ .+.+|+|+ |++|++ +|++.--++.. .+.|+.+|=-|.+|-
T Consensus 248 LVLS~---ESr~l~Ev-----d~~G~~--~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYI 299 (316)
T COG3204 248 LVLSD---ESRRLLEV-----DLSGEV--IELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYI 299 (316)
T ss_pred EEEec---CCceEEEE-----ecCCCe--eeeEEeccCCCCCcccCCCcceeEECCCCCEEE
Confidence 55554 66777774 677776 77766543322 356888888899984
Done!