Query 026012
Match_columns 245
No_of_seqs 137 out of 676
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 03:34:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026012.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026012hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ahn_A Thaumatin-like protein; 100.0 6.4E-87 2.2E-91 585.2 18.8 212 24-244 1-222 (222)
2 1du5_A Zeamatin; beta sandwich 100.0 8.3E-84 2.8E-88 559.5 13.7 203 24-244 1-206 (206)
3 1aun_A PR-5D; antifungal prote 100.0 3.9E-83 1.3E-87 556.0 17.0 204 23-245 1-207 (208)
4 1z3q_A Thaumatin-like protein; 100.0 7.7E-83 2.6E-87 550.9 16.7 198 24-244 1-200 (200)
5 2vhk_A Thaumatin-I; kinetics o 100.0 1.3E-81 4.4E-86 545.5 16.5 199 24-245 1-206 (206)
6 3g7m_A Xylanase inhibitor TL-X 100.0 1E-54 3.6E-59 360.5 13.2 145 24-244 1-151 (151)
7 3gd0_A Laminaripentaose-produc 94.1 0.31 1E-05 45.3 10.2 108 22-140 5-149 (367)
8 3gd0_A Laminaripentaose-produc 75.0 3.4 0.00012 38.2 5.1 40 205-244 321-365 (367)
9 4aor_D Trypsin inhibitor 3; hy 71.0 1.3 4.3E-05 27.4 0.8 13 183-195 11-23 (37)
10 4ep8_B Urease subunit beta; al 48.1 23 0.00079 26.9 4.4 19 22-40 20-38 (101)
11 4ac7_B Urease subunit beta; hy 37.4 40 0.0014 26.5 4.4 38 22-61 26-87 (126)
12 4ubp_B Protein (urease (chain 37.4 40 0.0014 26.5 4.4 38 22-61 26-87 (126)
13 1e9y_A Urease subunit alpha; h 22.9 97 0.0033 26.8 4.6 37 23-61 126-186 (238)
14 3qga_A UREA2, fusion of urease 22.4 1E+02 0.0036 26.4 4.7 38 22-61 125-186 (225)
15 2hrv_A 2A cysteine proteinase; 22.2 24 0.00082 28.4 0.7 18 81-99 97-114 (142)
16 4ajy_V VON hippel-lindau disea 21.6 1.1E+02 0.0037 25.0 4.5 44 22-70 20-67 (163)
17 1z8r_A Coxsackievirus B4 polyp 20.7 27 0.00094 28.7 0.7 18 81-99 117-134 (166)
No 1
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=6.4e-87 Score=585.24 Aligned_cols=212 Identities=38% Similarity=0.793 Sum_probs=202.4
Q ss_pred eEEEEEeCCCCceeceeec-------CCCCeeccCCCCceEEEEcCCCCceeEeeeeccCCCCCCccccccCccCCCccc
Q 026012 24 VILNIENQCSYTVWLAASP-------SSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVD 96 (245)
Q Consensus 24 ~t~tv~N~C~~tVwp~~~p-------~~~g~~L~~~~G~s~~~~vp~~WsGriwaRtgCs~~~~g~~~C~TGdCg~g~~~ 96 (245)
++|||+|+|+|||||++++ ..+||+| ++|++++|.+|.+|+|||||||+|+||+.|+++|+||||++|.|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L--~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~ 78 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFEL--ASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVM 78 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCB--CTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSS
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEc--CCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCcee
Confidence 5899999999999999964 5789999 999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCc
Q 026012 97 CQGPMPRYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGS 175 (245)
Q Consensus 97 C~g~~~~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~ 175 (245)
|++.+++||+|||||+|+ .+++|||||||||||||||+|+|+++.+ .|+.++|.+|||..||.|||+++.+|+
T Consensus 79 C~g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~------~C~~~~C~~dln~~CP~eL~v~~~~G~ 152 (222)
T 2ahn_A 79 CNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG------DCKTASCPANVNAVCPSELQKKGSDGS 152 (222)
T ss_dssp CTTCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBS------CCCCEEECSCGGGGCCGGGEEECTTSC
T ss_pred cCCCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCC------CcccCcccCchhhhCCHHHeeecCCCc
Confidence 999889999999999999 6689999999999999999999987643 799999999999999999999988899
Q ss_pred eeeecCCccccCCCCcccCC--CCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCCCceEEEecC
Q 026012 176 YVACNSPCDALRDARFCCTE--NFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP 244 (245)
Q Consensus 176 ~v~C~SaC~~~~~~~yCC~g--~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~~~y~VtFCP 244 (245)
+|||||||++|++|||||+| ++| ++|+|++||++||++||+||||||||++|||+|+++++|+|||||
T Consensus 153 ~v~C~saC~af~~~~yCC~g~~~~p-~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 153 VVACLSACVKFGTPQYCCTPPQNTP-ETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp EEEECCHHHHHCCHHHHCCTTSCST-TTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred EecccccccccCCCccccCCCCCCC-CCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999999 677 999999999999999999999999999999999988899999998
No 2
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=8.3e-84 Score=559.47 Aligned_cols=203 Identities=35% Similarity=0.762 Sum_probs=194.1
Q ss_pred eEEEEEeCCCCceeceeecCCCCeeccCCCCceEEEEcCCC-CceeEeeeeccCCCCCCccccccCccCCCccccCCCCC
Q 026012 24 VILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEP-WTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMP 102 (245)
Q Consensus 24 ~t~tv~N~C~~tVwp~~~p~~~g~~L~~~~G~s~~~~vp~~-WsGriwaRtgCs~~~~g~~~C~TGdCg~g~~~C~g~~~ 102 (245)
++|||+|+|+|||||+++|.++||+| ++|+++++++|++ |+|||||||+|+||+.|+++|+||||+ |.|+|++ ++
T Consensus 1 ~tfti~N~C~~tVWp~~~p~~gG~~L--~~G~s~s~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C~g-~g 76 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVPVGGGRQL--NRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCG-GVLQCTG-YG 76 (206)
T ss_dssp CEEEEEECSSSCEEEEEETTTEEEEE--CTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCT-TBSSCCS-CC
T ss_pred CEEEEEeCCCCCcCCeEecCCCCEec--CCCCeEEEECCCCCcccceecccccCCCCCCCccccccCCC-CeeecCC-CC
Confidence 58999999999999999998899999 9999999999999 999999999999999999999999999 9999999 88
Q ss_pred CCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCC-CcccccccccccCCcccccccCCCceeeec
Q 026012 103 RYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSC-PVVDCIADLSNVCAPELVATNKNGSYVACN 180 (245)
Q Consensus 103 ~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C-~~~~C~~dl~~~CP~~l~~~~~~g~~v~C~ 180 (245)
.||+|||||+|+ .+++|||||||||||||||+|+|++++ .| +.++|.+|||..||.|||++ +|||
T Consensus 77 ~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~-------~C~~~~~C~~dln~~CP~~L~v~------~gC~ 143 (206)
T 1du5_A 77 RAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGS-------GCSRGPRCAVDVNARCPAELRQD------GVCN 143 (206)
T ss_dssp CSSCCEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSS-------SCCCCCEECSCTTTTCCGGGEET------TEEC
T ss_pred CCcceeeEEEeccCCCCceeeeeeecccccCEEEecCCCC-------CCcCCCcccccchhhCCHHHhhc------cccC
Confidence 999999999999 678999999999999999999998652 59 99999999999999999996 4999
Q ss_pred CCccccCCCCcccCCCCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCCCceEEEecC
Q 026012 181 SPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP 244 (245)
Q Consensus 181 SaC~~~~~~~yCC~g~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~~~y~VtFCP 244 (245)
|||++|++|||||+|.+. .+|+|++||++||++||+||||||||++|||+|+++++|+|||||
T Consensus 144 saC~~f~~~~yCC~g~~~-~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 144 NACPVFKKDEYCCVGSAA-NDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp CHHHHHCCHHHHCCGGGG-GGCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred ChhhccCCCcccccCCCC-CcCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 999999999999999776 599999999999999999999999999999999988999999998
No 3
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=3.9e-83 Score=555.99 Aligned_cols=204 Identities=33% Similarity=0.731 Sum_probs=192.8
Q ss_pred ceEEEEEeCCCCceeceeecCCCCeeccCCCCceEEEEcCCCCc-eeEeeeeccCCCCCCccccccCccCCCccccCCCC
Q 026012 23 EVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWT-GSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPM 101 (245)
Q Consensus 23 ~~t~tv~N~C~~tVwp~~~p~~~g~~L~~~~G~s~~~~vp~~Ws-GriwaRtgCs~~~~g~~~C~TGdCg~g~~~C~g~~ 101 (245)
+++|||+|+|+|||||+++|..+||+| ++||++++.+|++|+ |||||||+|+||+.|+++|+||||+ |.|+|++ +
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p~~gG~~L--~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C~g-~ 76 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATPVGGGRRL--ERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKG-W 76 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETTTEEEEE--CTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSSCSS-C
T ss_pred CcEEEEEeCCCCCcCCeEecCCCCeeC--CCCCeEEEECCCCCcccceecccccCCCCCCCcccccCCcC-ceeecCC-C
Confidence 469999999999999999998899999 999999999999995 9999999999999999999999999 9999999 7
Q ss_pred CCCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCceeeec
Q 026012 102 PRYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACN 180 (245)
Q Consensus 102 ~~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~~v~C~ 180 (245)
++||+|||||+|+ .+++|||||||||||||||+|+|+++. ...|+.++|.+|||..||.|||+++ ||+
T Consensus 77 g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlP~~i~P~~~g-----~g~C~~~~C~~dln~~CP~~L~v~~------~C~ 145 (208)
T 1aun_A 77 GKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPG-----PGKCHGIQCTANINGECPGSLRVPG------GCN 145 (208)
T ss_dssp CCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCC-----STTCSCEEECSCHHHHCCTTTEETT------EEC
T ss_pred CCCCcceEEEEecCCCCCceeeeecccCcccCeeeeeCCCC-----CCCCCcccccCcchhhCCHHHcccc------ccc
Confidence 8899999999999 667999999999999999999998621 1279999999999999999999974 999
Q ss_pred CCccccCCCCcccCCCCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCC-CCceEEEecCC
Q 026012 181 SPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGG-ANRYNVTFCPL 245 (245)
Q Consensus 181 SaC~~~~~~~yCC~g~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~-~~~y~VtFCP~ 245 (245)
|||++|++|||||+| ++|+|++||++||++||+||+|||||++|||+|++ +++|+|||||+
T Consensus 146 saC~af~~~~yCC~g----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP~ 207 (208)
T 1aun_A 146 NPCTTFGGQQYCCTQ----GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPY 207 (208)
T ss_dssp CHHHHTCSHHHHCTT----SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTT
T ss_pred CHhhhcCCCcccccC----CCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCCC
Confidence 999999999999999 78999999999999999999999999999999998 78999999995
No 4
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=7.7e-83 Score=550.94 Aligned_cols=198 Identities=38% Similarity=0.801 Sum_probs=189.8
Q ss_pred eEEEEEeCCCCceeceeecCCCCeeccCCCCceEEEEcCCCC-ceeEeeeeccCCCCCCccccccCccCCCccccCCCCC
Q 026012 24 VILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPW-TGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMP 102 (245)
Q Consensus 24 ~t~tv~N~C~~tVwp~~~p~~~g~~L~~~~G~s~~~~vp~~W-sGriwaRtgCs~~~~g~~~C~TGdCg~g~~~C~g~~~ 102 (245)
++|||+|+|+|||||+++| ++||+| ++|++++|++|++| +|||||||+|+||+.|+++|+||||+ |.|+|++ ++
T Consensus 1 ~t~ti~N~C~~tVWp~~~p-~gG~~L--~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C~g-~g 75 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVP-GGGRQL--NQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCG-GVLSCTA-YG 75 (200)
T ss_dssp CEEEEEECSSSCEEEEEET-TEEEEE--CTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSSCSS-CC
T ss_pred CEEEEEeCCCCCeeceEeC-CCCccc--CCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcC-CeeecCC-CC
Confidence 5899999999999999998 789999 99999999999999 59999999999999999999999999 9999999 77
Q ss_pred CCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCceeeecC
Q 026012 103 RYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNS 181 (245)
Q Consensus 103 ~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~~v~C~S 181 (245)
+||+|||||+|+ .+++|||||||||||||||+|+|+++ .|+.++|.+|||..||.|||+++ ||+|
T Consensus 76 ~pPaTLaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g--------~C~~~~C~~dln~~CP~~L~v~~------gC~s 141 (200)
T 1z3q_A 76 NPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSG--------GCRGIRCAADINGQCPGALKAPG------GCNN 141 (200)
T ss_dssp CSSCCEEEEEEEETTTEEEEEEECTTCBSSCEEEEESSS--------SSCCEEECSCHHHHCCTTTEETT------EECC
T ss_pred CCCcceEEEEecCCCCCceeeeeeeccccCCeeeeeCCC--------CCCccccccchhhhCCHHHcccC------cccC
Confidence 899999999999 77899999999999999999999854 69999999999999999999974 9999
Q ss_pred CccccCCCCcccCCCCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCCCceEEEecC
Q 026012 182 PCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP 244 (245)
Q Consensus 182 aC~~~~~~~yCC~g~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~~~y~VtFCP 244 (245)
||++|++|||||+| ++|+|++||++||++||+||||||||++|||+|+++++|+|||||
T Consensus 142 aC~af~~~~yCC~g----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 142 PCTVFKTDQYCCNS----GACSPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp HHHHHCCHHHHCTT----SCCCCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred cccccCCCcccCCC----CCCCchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 99999999999999 789999999999999999999999999999999988999999998
No 5
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=1.3e-81 Score=545.45 Aligned_cols=199 Identities=38% Similarity=0.740 Sum_probs=188.5
Q ss_pred eEEEEEeCCCCceeceeec-----CCCCeeccCCCCceEEEEcCCC-CceeEeeeeccCCCCCCccccccCccCCCcccc
Q 026012 24 VILNIENQCSYTVWLAASP-----SSGDFNSEHAPGTLEIFSMPEP-WTGSIWARTKCSNNESFYFSCETGDCGTGQVDC 97 (245)
Q Consensus 24 ~t~tv~N~C~~tVwp~~~p-----~~~g~~L~~~~G~s~~~~vp~~-WsGriwaRtgCs~~~~g~~~C~TGdCg~g~~~C 97 (245)
++|||+|+|+|||||++++ .++||+| ++|++++|.+|++ |+|||||||+|+||+.|+++|+||||+ |.|+|
T Consensus 1 ~tfti~N~C~~tVWp~~~~g~~~l~~gG~~L--~~G~s~~~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C 77 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASKGDAALDAGGRQL--NSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCG-GLLRC 77 (206)
T ss_dssp CEEEEEECSSSCEEEEEECSSSEEEEEEEEE--CTTCEEEEECCTTCCSEEEEEEBSCEECTTSBEECSBSCCT-TBSSC
T ss_pred CEEEEEeCCCCCcCCEEcCCCCcCCCCCeec--CCCCEEEEECCCCCcccceeccccCCCCCCCCcccccCCCC-ceeec
Confidence 5899999999999999963 3679999 9999999999999 999999999999999999999999999 99999
Q ss_pred CCCCCCCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCce
Q 026012 98 QGPMPRYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSY 176 (245)
Q Consensus 98 ~g~~~~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~~ 176 (245)
++ +++||+|||||+|+ .++ |||||||||||||||+|+|+++ .|+.++|.+|||..||.|||+++
T Consensus 78 ~g-~g~pPaTLaEftl~~~~~-dfYDVSlVDGfNlP~~i~p~~g--------~C~~~~C~~dln~~CP~eL~v~~----- 142 (206)
T 2vhk_A 78 KR-FGRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMNFSPTTR--------GCRGVRCAADIVGQCPAKLKAPG----- 142 (206)
T ss_dssp SS-CCCSSCCEEEEEEEETTE-EEEEEECTTCBSSCEEEEESSS--------SCCCEEECSCHHHHCCGGGBCTT-----
T ss_pred CC-CCCCCcceEEEEeccCCC-ceeeeeccCCccCCEEeeeCCC--------CCCccccccchhhhCCHHHeecc-----
Confidence 99 88999999999998 555 9999999999999999999854 69999999999999999999973
Q ss_pred eeecCCccccCCCCcccCCCCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCCCceEEEecCC
Q 026012 177 VACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL 245 (245)
Q Consensus 177 v~C~SaC~~~~~~~yCC~g~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~~~y~VtFCP~ 245 (245)
+||||||++|++|||||+| ++|+|++||++||++||+||+|||||++| |+|+++++|+|||||+
T Consensus 143 ~~C~saC~af~~~~yCC~g----~~C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP~ 206 (206)
T 2vhk_A 143 GGCNDACTVFQTSEYCCTT----GKCGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCPT 206 (206)
T ss_dssp SSBCCHHHHHCCHHHHTTT----SCCCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESCC
T ss_pred ccccChhhccCCCcccccC----CCCCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCCC
Confidence 4999999999999999999 78999999999999999999999999999 9999889999999995
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=1e-54 Score=360.48 Aligned_cols=145 Identities=32% Similarity=0.690 Sum_probs=130.8
Q ss_pred eEEEEEeCCCCceeceee----cCCCCeeccCCCCceEEEEcCCCCceeEeeeeccCCCCCCccccccCccCCCccccCC
Q 026012 24 VILNIENQCSYTVWLAAS----PSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQG 99 (245)
Q Consensus 24 ~t~tv~N~C~~tVwp~~~----p~~~g~~L~~~~G~s~~~~vp~~WsGriwaRtgCs~~~~g~~~C~TGdCg~g~~~C~g 99 (245)
++|||+|+|+|||||+++ |..+||+| ++|+++++.+|++|+|||||||+|+||+.|+++|+||||++|+|+|++
T Consensus 1 ~tfti~N~C~~tVWp~~~~~~~p~~gG~~L--~~g~s~~~~~p~~wsGRiWgRTgC~fd~~g~~~C~TGdCg~g~l~C~~ 78 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALVLAQGGGGTEL--HPGASWSLDTPVIGSQYIWGRTGCSFDRAGKGRCQTGDCGGSSLTCGG 78 (151)
T ss_dssp CCEEEEECSSSCEEEEEEETTSSCCEECCB--CTTCEEEECCCSSEEEEEEEEESCEECSSCCEECSBSCSSTTSCCSCS
T ss_pred CEEEEEeCCCCCccCeeccCCCCCCCCeEc--CCCCeEEEECCCCCcceeecccCCCCCCCCCcccccCCccCCcccccC
Confidence 479999999999999998 67889999 999999999999999999999999999999999999999559999997
Q ss_pred CCCCCCceEEEEEecCCCCceeeeecc-CccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCceee
Q 026012 100 PMPRYPVTLLNLSINNKSEVSYEVSLN-HGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVA 178 (245)
Q Consensus 100 ~~~~~paTlaEftl~~~~~d~YDVSlV-dGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~~v~ 178 (245)
+++||+|||||+|+ +++|||||||| |||||||+|+|+++.+ .-
T Consensus 79 -~g~pPaTlaEftl~-~~~d~YDVSlV~dG~NlP~~i~P~~g~~----------------------------------~~ 122 (151)
T 3g7m_A 79 -NPAVPTTMAEVSVL-QGNYTYGVTSTLKGFNVPMNLKCSSGDA----------------------------------LP 122 (151)
T ss_dssp -CCCSSCCEEEEEEC-SSEEEEEEESSSSCCSSCEEEEESSSCC----------------------------------EE
T ss_pred -CCCCCceeEEEEcc-CCCceEEEEeccCCCCCCeEEEeCCCCc----------------------------------Cc
Confidence 67899999999998 57899999999 9999999999987531 12
Q ss_pred ecCCccccCCCCcccCCCCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCCCc-eEEEecC
Q 026012 179 CNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANR-YNVTFCP 244 (245)
Q Consensus 179 C~SaC~~~~~~~yCC~g~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~~~-y~VtFCP 244 (245)
|.+ ..||+||.|+ +.|+...+ |+|||||
T Consensus 123 C~~-------------------------------~gC~dAy~~p-------~aC~~~~~~~~vtFCp 151 (151)
T 3g7m_A 123 CRK-------------------------------AGCDVVQPYA-------KSCSAAGSRLQIVFCP 151 (151)
T ss_dssp ECS-------------------------------TTCCSSSCCE-------EEEECTTCCEEEEECC
T ss_pred CCC-------------------------------CCCCccccCC-------CcCCCCCCceEEEeCC
Confidence 322 4799999988 79998887 9999998
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=94.07 E-value=0.31 Score=45.29 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=65.0
Q ss_pred cceEEEEEeCCCC--ceeceee-------------------c-----------CCCCeeccCCCCceEEEEcCCCCceeE
Q 026012 22 SEVILNIENQCSY--TVWLAAS-------------------P-----------SSGDFNSEHAPGTLEIFSMPEPWTGSI 69 (245)
Q Consensus 22 ~~~t~tv~N~C~~--tVwp~~~-------------------p-----------~~~g~~L~~~~G~s~~~~vp~~WsGri 69 (245)
..-.|+|+|+=.. .||..+. | .+-.+.|. .+|+++++.||. .+|||
T Consensus 5 ~tlpl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~-~~G~s~ti~iP~-~sGRI 82 (367)
T 3gd0_A 5 ATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGP-APGRSTTIQIPK-FSGRI 82 (367)
T ss_dssp SEEEEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECC-CTTCEEEEEEES-EEEEE
T ss_pred CceeEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECC-CCCCceEEEccC-cCceE
Confidence 3567999999864 5887651 1 11124553 678899999998 79999
Q ss_pred eeeeccCCCCCCccccccCccCCCccccCCCC-CCC----CceEEEEEecCCCCceeeeeccCccCCCceeecCCC
Q 026012 70 WARTKCSNNESFYFSCETGDCGTGQVDCQGPM-PRY----PVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGG 140 (245)
Q Consensus 70 waRtgCs~~~~g~~~C~TGdCg~g~~~C~g~~-~~~----paTlaEftl~~~~~d~YDVSlVdGfNlP~~i~p~~~ 140 (245)
|=..|=-. .|.=..+ |..+=.... .-| --.-+|||++ ...-|=++|.||-|.+||.|+-.+.
T Consensus 83 yfS~g~~L----~f~~~~~----glv~Ps~~NpsDPN~~~~~~f~EfT~n-~~gl~~N~S~VD~~~~Pl~l~l~~~ 149 (367)
T 3gd0_A 83 YFSYGRKM----EFRLTTG----GLVQPAVQNPTDPNRDILFNWSEYTLN-DSGLWINSTQVDMFSAPYTVGVRRG 149 (367)
T ss_dssp EEEESSCC----CCEEETT----EECCCCTTSTTCTTTTSCEEEEEEEEE-TTEEEEECCCSSEECSCEEEEEECT
T ss_pred EEEcCCcc----EEEecCC----CccCCCCCCCCCCCCCceeeEEEEEec-CcceecccceeccccCceEEEEEcC
Confidence 93332100 1111111 111100000 111 2245899999 4568899999999999999975543
No 8
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=74.97 E-value=3.4 Score=38.24 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=30.9
Q ss_pred chhHHHHHhhcc--ccccCCCCCCC---CceeeCCCCceEEEecC
Q 026012 205 NQYSKKFKQLCG--LAHTYPADNNP---PTYSCGGANRYNVTFCP 244 (245)
Q Consensus 205 t~ys~~fK~~CP--~AYsya~DD~t---stftC~~~~~y~VtFCP 244 (245)
+.|++++++.=. .+|.|||||-. ++..-......+||.-|
T Consensus 321 NhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 321 NHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp CHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred cHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 589999999865 68999999843 55555556778888766
No 9
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=71.00 E-value=1.3 Score=27.37 Aligned_cols=13 Identities=23% Similarity=0.887 Sum_probs=11.3
Q ss_pred ccccCCCCcccCC
Q 026012 183 CDALRDARFCCTE 195 (245)
Q Consensus 183 C~~~~~~~yCC~g 195 (245)
|..|+.++|||+|
T Consensus 11 c~~f~~p~~ccsg 23 (37)
T 4aor_D 11 CSGFGPPEQCCSG 23 (37)
T ss_dssp ECTTSCGGGBTTS
T ss_pred cCCCCCccccccc
Confidence 5569999999998
No 10
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=48.09 E-value=23 Score=26.89 Aligned_cols=19 Identities=11% Similarity=0.186 Sum_probs=17.2
Q ss_pred cceEEEEEeCCCCceecee
Q 026012 22 SEVILNIENQCSYTVWLAA 40 (245)
Q Consensus 22 ~~~t~tv~N~C~~tVwp~~ 40 (245)
...+++|.|.-.-+|++|.
T Consensus 20 ~~~~l~V~NtGDRPIQVGS 38 (101)
T 4ep8_B 20 ATCRVVVENHGDRPIQVGS 38 (101)
T ss_dssp CEEEEEEEECSSSCEEEET
T ss_pred CEEEEEEEeCCCcceEEcc
Confidence 3688999999999999997
No 11
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=37.42 E-value=40 Score=26.55 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=28.7
Q ss_pred cceEEEEEeCCCCceeceee------------------------cCCCCeeccCCCCceEEEEc
Q 026012 22 SEVILNIENQCSYTVWLAAS------------------------PSSGDFNSEHAPGTLEIFSM 61 (245)
Q Consensus 22 ~~~t~tv~N~C~~tVwp~~~------------------------p~~~g~~L~~~~G~s~~~~v 61 (245)
...+|+|.|.=.-+|.+|.+ |.++..+. +||+++++.+
T Consensus 26 ~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF--EPG~~k~V~L 87 (126)
T 4ac7_B 26 EKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF--EPGEEMEVEL 87 (126)
T ss_dssp CEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE--CTTCEEEEEE
T ss_pred cEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee--CCCCeEEEEE
Confidence 36799999999999999972 23444555 7788887775
No 12
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=37.42 E-value=40 Score=26.55 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=28.7
Q ss_pred cceEEEEEeCCCCceeceee------------------------cCCCCeeccCCCCceEEEEc
Q 026012 22 SEVILNIENQCSYTVWLAAS------------------------PSSGDFNSEHAPGTLEIFSM 61 (245)
Q Consensus 22 ~~~t~tv~N~C~~tVwp~~~------------------------p~~~g~~L~~~~G~s~~~~v 61 (245)
...+|+|.|.=.-+|.+|.+ |.++..+. +||+++++.+
T Consensus 26 ~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF--EPG~~k~V~L 87 (126)
T 4ubp_B 26 EKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF--EPGEEMEVEL 87 (126)
T ss_dssp CEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE--CTTCEEEEEE
T ss_pred cEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee--CCCCeEEEEE
Confidence 36799999999999999972 23444555 7788887775
No 13
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=22.89 E-value=97 Score=26.85 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=28.8
Q ss_pred ceEEEEEeCCCCceeceee------------------------cCCCCeeccCCCCceEEEEc
Q 026012 23 EVILNIENQCSYTVWLAAS------------------------PSSGDFNSEHAPGTLEIFSM 61 (245)
Q Consensus 23 ~~t~tv~N~C~~tVwp~~~------------------------p~~~g~~L~~~~G~s~~~~v 61 (245)
..+|+|.|.-.-+|++|.+ |.++..+. +||+++++.+
T Consensus 126 ~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRF--EPG~~r~V~L 186 (238)
T 1e9y_A 126 AVSVKVKNVGDRPVQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRF--EPGEEKSVEL 186 (238)
T ss_dssp CCEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEE--CTTCEEEEEE
T ss_pred eEEEEEEeCCCCceEeccccchHhcCccccccHHHhCCcccCcCCCCeEee--CCCCeeEEEE
Confidence 6899999999999999972 34444556 7888888875
No 14
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=22.40 E-value=1e+02 Score=26.42 Aligned_cols=38 Identities=13% Similarity=0.268 Sum_probs=29.0
Q ss_pred cceEEEEEeCCCCceeceee------------------------cCCCCeeccCCCCceEEEEc
Q 026012 22 SEVILNIENQCSYTVWLAAS------------------------PSSGDFNSEHAPGTLEIFSM 61 (245)
Q Consensus 22 ~~~t~tv~N~C~~tVwp~~~------------------------p~~~g~~L~~~~G~s~~~~v 61 (245)
...+++|.|.=.-+|.+|.+ |.++..+. +||+++++.+
T Consensus 125 ~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF--EPG~~k~V~L 186 (225)
T 3qga_A 125 EITELKVTNKGPKSLHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRI--GAGETKTVHL 186 (225)
T ss_dssp CCEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE--CTTCEEEEEE
T ss_pred ceEEEEEEECCCCceeeccccchhhcCchhhccHHHhCCcccccCCCCeEee--CCCCeeEEEE
Confidence 36799999999999999972 34444556 7888888874
No 15
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=22.19 E-value=24 Score=28.38 Aligned_cols=18 Identities=44% Similarity=0.914 Sum_probs=15.7
Q ss_pred CccccccCccCCCccccCC
Q 026012 81 FYFSCETGDCGTGQVDCQG 99 (245)
Q Consensus 81 g~~~C~TGdCg~g~~~C~g 99 (245)
+.+.|+-|||| |.|.|..
T Consensus 97 g~G~~epGDCG-G~L~C~H 114 (142)
T 2hrv_A 97 GEGPCEPGDCG-GKLLCKH 114 (142)
T ss_dssp EECCCCTTCTT-CEEEETT
T ss_pred EEcCCCCCCCC-ceeeeCC
Confidence 55789999999 9999984
No 16
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=21.61 E-value=1.1e+02 Score=25.05 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=32.1
Q ss_pred cceEEEEEeCCCCceeceeecCCCC----eeccCCCCceEEEEcCCCCceeEe
Q 026012 22 SEVILNIENQCSYTVWLAASPSSGD----FNSEHAPGTLEIFSMPEPWTGSIW 70 (245)
Q Consensus 22 ~~~t~tv~N~C~~tVwp~~~p~~~g----~~L~~~~G~s~~~~vp~~WsGriw 70 (245)
....++|+|+++.+|-+-+.-..|. ..| .||+...++- |.+..|
T Consensus 20 ~~~~V~FvN~s~~~V~v~WIDy~G~~~~Y~tL--~PG~~~~~~T---Y~tHpW 67 (163)
T 4ajy_V 20 EPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTL--PPGTGRRIHS---YRGHLW 67 (163)
T ss_dssp CEEEEEEEECSSSCEEEEEECTTSCEEECCCB--CTTEEEEEEE---ETTCEE
T ss_pred ceEEEEEEeCCCCeEEEEEECCCCCEEEeeee--CCCCeEEecC---CCCCcE
Confidence 3578999999999998888543332 266 9999887763 555566
No 17
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=20.72 E-value=27 Score=28.73 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=15.9
Q ss_pred CccccccCccCCCccccCC
Q 026012 81 FYFSCETGDCGTGQVDCQG 99 (245)
Q Consensus 81 g~~~C~TGdCg~g~~~C~g 99 (245)
+.+.|+-|||| |.|.|+.
T Consensus 117 ~~G~~epGDCG-G~L~C~H 134 (166)
T 1z8r_A 117 ATGFSEPGDAG-GILRCEH 134 (166)
T ss_dssp EECSSSCCCCB-SEEECSS
T ss_pred EecCCCCCCCC-ceeeeCC
Confidence 56789999999 9999985
Done!