BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026013
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84J50|HS177_ORYSJ 17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.7 PE=2 SV=1
Length = 159
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 18/99 (18%)
Query: 121 ADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMW- 179
A + +E+P+ F A+ G+ + VE+ G +++ +G E S E + D W
Sbjct: 52 ARIDWKETPEVHVFKADVPGLKKEEVK-VEVDDGN---ILQISG--ERSREQEEKSDKWH 105
Query: 180 -----------RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLPE+T+PE A E+G L VTVPK
Sbjct: 106 RVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK 144
>sp|Q84Q72|HS181_ORYSJ 18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP18.1 PE=2 SV=1
Length = 161
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 121 ADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMW- 179
A + +E+P+ F A+ G+ + + V +I E S E + D W
Sbjct: 54 ARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQI------SGERSKEQEEKTDKWH 107
Query: 180 -----------RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLPE+T+PE A E+G L VTVPK
Sbjct: 108 RVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK 146
>sp|P31673|HS174_ORYSJ 17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.4 PE=2 SV=2
Length = 154
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLPE+T+PE A E+G L VTVPK
Sbjct: 112 RFRLPENTKPEQIKASMENGVLTVTVPK 139
>sp|P12811|HS22C_CHLRE Heat shock 22 kDa protein, chloroplastic OS=Chlamydomonas
reinhardtii PE=2 SV=1
Length = 157
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 21/95 (22%)
Query: 127 ESPDYFKFVAETDGMG--EVRAHMVEIHPGVTKIVIRPNGCVELS-SLDELELDMWR--- 180
ESP F+ A+ GMG +V+ VE+ GV + G +LS + E +WR
Sbjct: 53 ESPTAFELHADAPGMGPDDVK---VELQEGVLMVT----GERKLSHTTKEAGGKVWRSER 105
Query: 181 --------FRLPESTRPELASAVFEDGELIVTVPK 207
F LPE+ P+ +A + G L+VTVPK
Sbjct: 106 TAYSFSRAFSLPENANPDGITAAMDKGVLVVTVPK 140
>sp|Q84Q77|HS17A_ORYSJ 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.9A PE=2 SV=1
Length = 161
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 18/99 (18%)
Query: 121 ADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMW- 179
A + +E+P+ F A+ G+ + VE+ G +++ +G E + E + D W
Sbjct: 54 ARIDWKETPEAHVFKADVPGLKKEEVK-VEVDDGN---ILQISG--ERNKEQEEKTDQWH 107
Query: 180 -----------RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLP++ +PE A E+G L VTVPK
Sbjct: 108 RVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPK 146
>sp|P19036|HSP17_ARATH 17.4 kDa class I heat shock protein OS=Arabidopsis thaliana
GN=HSP17.4A PE=1 SV=2
Length = 156
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 18/101 (17%)
Query: 119 SDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDM 178
++A V E+P+ F A+ G+ + + + +I E SS +E + D
Sbjct: 47 TNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQI------SGERSSENEEKSDT 100
Query: 179 W------------RFRLPESTRPELASAVFEDGELIVTVPK 207
W RFRLPE+ + E A E+G L VTVPK
Sbjct: 101 WHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPK 141
>sp|Q53M11|HS219_ORYSJ 21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP21.9 PE=2 SV=1
Length = 206
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEER----DGGGGGD 224
RFR+P +A +DG L VTVPK G G E R DG G GD
Sbjct: 145 RFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAIDGAGAGD 193
>sp|P04795|HSP15_SOYBN 17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L
PE=3 SV=1
Length = 154
Score = 34.7 bits (78), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + E A E+G L VT+PK
Sbjct: 110 MRRFRLPENAKVEQVKACMENGVLTVTIPK 139
>sp|A4WMH5|RL3_PYRAR 50S ribosomal protein L3P OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rpl3p PE=3 SV=1
Length = 338
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 79 NLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAET 138
L+ N LR+ + G LP +RVL LP + D D +++ +Y E
Sbjct: 91 TLDPTNGYLRSAAEVWAG-------ELPKHLSRVLTLPEKVDVDKQMKQVEEYRDVAVEV 143
Query: 139 DGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASA--VF 196
+ + H+ I +++ P G V ++DE R + S + S VF
Sbjct: 144 RALVATQPHLSGIGKKTPELLEIPIGGV--PNIDE------RIKFAISLLGKTVSPKDVF 195
Query: 197 EDGEL--IVTVPKGGGLEGLEERDG 219
G+L ++ V KG G +G+ +R G
Sbjct: 196 SPGQLVDVIAVTKGKGWQGVVKRFG 220
>sp|P04793|HSP13_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M
PE=3 SV=1
Length = 153
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + E A E+G L VTVPK
Sbjct: 109 MRRFRLPENAKVEQVKASMENGVLTVTVPK 138
>sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C
PE=3 SV=1
Length = 161
Score = 34.3 bits (77), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + E A E+G L VTVPK
Sbjct: 117 MRRFRLPENAKVEQVKASMENGVLTVTVPK 146
>sp|P19037|HS181_ARATH 18.1 kDa class I heat shock protein OS=Arabidopsis thaliana
GN=HSP18.1 PE=2 SV=1
Length = 161
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 119 SDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDM 178
++A V +E+P+ F A+ G+ + + V +I E S +E + D
Sbjct: 50 TNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQI------SGERSKENEEKNDK 103
Query: 179 W------------RFRLPESTRPELASAVFEDGELIVTVPKG 208
W RFRLPE+ + E A E+G L V VPK
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKA 145
>sp|P13853|HS17C_ARATH 17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana
GN=HSP17.6C PE=2 SV=2
Length = 157
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 18/101 (17%)
Query: 119 SDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDM 178
++A V E+P+ F A+ G+ + VE+ G +++ +G E S+ +E + D
Sbjct: 48 TNAKVDWRETPEAHVFKADLPGLRKEEVK-VEVEDGN---ILQISG--ERSNENEEKNDK 101
Query: 179 W------------RFRLPESTRPELASAVFEDGELIVTVPK 207
W RFRLPE+ + E A E+G L VTVPK
Sbjct: 102 WHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPK 142
>sp|Q9ZW31|HS17B_ARATH 17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana
GN=HSP17.6B PE=2 SV=1
Length = 153
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPKG 208
RFRLPE+ + + A E+G L VTVPK
Sbjct: 111 RFRLPENVKMDQVKAAMENGVLTVTVPKA 139
>sp|P27880|HSP12_MEDSA 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2
PE=2 SV=1
Length = 158
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 114 MRRFRLPENAKMDQVKAAMENGVLTVTVPK 143
>sp|Q943E7|HS16C_ORYSJ 16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp.
japonica GN=HSP16.9C PE=2 SV=1
Length = 149
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPKG 208
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 105 MRRFRLPENAKVDQVKASMENGVLTVTVPKA 135
>sp|P27879|HSP11_MEDSA 18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa
GN=HSP18.1 PE=2 SV=1
Length = 143
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 99 MRRFRLPENAKMDQVKAAMENGVLTVTVPK 128
>sp|O82012|HSP12_SOLPE 17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1
Length = 154
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 110 MRRFRLPENAKMDQVKASMENGVLTVTVPK 139
>sp|O82011|HSP11_SOLPE 17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1
Length = 154
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 110 MRRFRLPENAKMDQVKASMENGVLTVTVPK 139
>sp|P30221|HSP11_SOLLC 17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2
SV=1
Length = 154
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 110 MRRFRLPENAKMDQVKASMENGVLTVTVPK 139
>sp|P27777|HS16A_ORYSJ 16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp.
japonica GN=HSP16.9A PE=1 SV=1
Length = 150
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPKG 208
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 106 MRRFRLPENAKVDQVKAGLENGVLTVTVPKA 136
>sp|Q943E6|HS16B_ORYSJ 16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp.
japonica GN=HSP16.9B PE=2 SV=1
Length = 150
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPKG 208
M RFRLPE+ + + A E+G L VTVPK
Sbjct: 106 MRRFRLPENAKVDQVKAGMENGVLTVTVPKA 136
>sp|P12810|HS16A_WHEAT 16.9 kDa class I heat shock protein 1 OS=Triticum aestivum
GN=hsp16.9A PE=2 SV=1
Length = 151
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPKG 208
RFRLPE + E A E+G L VTVPK
Sbjct: 109 RFRLPEDAKVEEVKAGLENGVLTVTVPKA 137
>sp|P02519|HSP11_SOYBN 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B
PE=3 SV=1
Length = 153
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLPE+ + + A E+G L VTVPK
Sbjct: 111 RFRLPENAKVDQVKASMENGVLTVTVPK 138
>sp|Q943Q3|HS166_ORYSJ 16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP16.6 PE=2 SV=1
Length = 150
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLP R + SA ++G L VTVPK
Sbjct: 108 RFRLPRGARVDQVSASMDNGVLTVTVPK 135
>sp|P19243|HSP11_PEA 18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1
PE=2 SV=1
Length = 158
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLPE+ + + A E+G L VTVPK
Sbjct: 116 RFRLPENAKMDKVKASMENGVLTVTVPK 143
>sp|Q02403|T231E_BACTF Transposase for insertion sequence element IS231E OS=Bacillus
thuringiensis subsp. finitimus PE=3 SV=1
Length = 478
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 79 NLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAET 138
L+ L +P+ L+ F+ K + L HIF+ +L+ + + S YF+ +
Sbjct: 68 QLHAVTGTLMSPEGLNKRFNKKAVCFLKHIFSTLLKNKI-CETSLIPSSSITYFQRIRIL 126
Query: 139 DG-MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLD-ELELDM 178
D + +V H+ ++PG GC + + + +LE D+
Sbjct: 127 DATIFQVPKHLANVYPG-------SGGCAQTAGIKIQLEYDL 161
>sp|O29421|PELO_ARCFU Protein pelota homolog OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pelA
PE=1 SV=1
Length = 344
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 175 ELDMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEGL-EERDGGGGGDGSENGEFRG 233
+L+ R + +S RPE+ E+G + V + G+E + EER G G G G EF G
Sbjct: 115 QLERLRRAVEDSNRPEIVMLTIEEGYAVAGVLRQWGVEEIFEERMGYGKGMGDSRKEFFG 174
>sp|B1YD88|RL3_PYRNV 50S ribosomal protein L3P OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl3p PE=3 SV=1
Length = 338
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 105 LPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNG 164
LP RVL LP ++D D +++ ++ + + + H+ I +++ P G
Sbjct: 110 LPAYIRRVLTLPEKADVDKQMKKVEEFKDVAVDVRALVATQPHLSGIGKKTPELLEIPIG 169
Query: 165 CVELSSLDELELDMWRFRLPESTRPELASA--VFEDGEL--IVTVPKGGGLEGLEERDG 219
V S+DE R + S + S VF G+L ++ V KG G +G+ +R G
Sbjct: 170 GV--PSVDE------RIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFG 220
>sp|Q9XIE3|HS17A_ARATH 17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana
GN=HSP17.6A PE=1 SV=1
Length = 155
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
+FRLPE+ + + A E+G L VTVPK
Sbjct: 111 KFRLPENVKMDQVKASMENGVLTVTVPK 138
>sp|P09440|C1TM_YEAST C-1-tetrahydrofolate synthase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MIS1 PE=1
SV=1
Length = 975
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 113 LELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPN 163
LE P SD D++ +SP + K VAE G + +H +E++ G K I PN
Sbjct: 340 LESPVPSDIDISRAQSPKHIKQVAEELG---IHSHELELY-GHYKAKISPN 386
>sp|P04794|HSP14_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E
PE=3 SV=1
Length = 154
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
RFRLPE+ + A E+G L VTVPK
Sbjct: 112 RFRLPENAKVNEVKASMENGVLTVTVPK 139
>sp|Q05832|HSP11_CHERU 18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18
PE=2 SV=1
Length = 161
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPK 207
M +FRLPE+ + + A E+G L VTVPK
Sbjct: 118 MRKFRLPENAKVDQVKAGMENGVLTVTVPK 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,224,294
Number of Sequences: 539616
Number of extensions: 4487757
Number of successful extensions: 21666
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 21086
Number of HSP's gapped (non-prelim): 562
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)