BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026017
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYZ2|PPA8_ARATH Purple acid phosphatase 8 OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 335
Score = 325 bits (834), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 180/217 (82%), Gaps = 1/217 (0%)
Query: 20 CPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGD 79
C S+AELP F P +PDGSLSFLVVGDWGRRG+YNQ++VA QMG +G+ L IDF+ISTGD
Sbjct: 26 CNSTAELPRFVQPPEPDGSLSFLVVGDWGRRGSYNQSQVALQMGKIGKDLNIDFLISTGD 85
Query: 80 NFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRW 139
NFYDDG+ D+ F +SF NIYTA SL K WYNVLGNHDYRG+V AQLSP+LRD+D RW
Sbjct: 86 NFYDDGIISPYDSQFQDSFTNIYTATSLQKPWYNVLGNHDYRGNVYAQLSPILRDLDCRW 145
Query: 140 LCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSAL 199
+CLRS++VNAEI + FVDTTPFV++YF +P+DHVYDW G+ PR YL +LL DVD AL
Sbjct: 146 ICLRSYVVNAEIVDIFFVDTTPFVDRYFDEPKDHVYDWRGVLPRNKYLNSLLT-DVDVAL 204
Query: 200 KESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQ 236
+ES AKWKIVVGHHTIKS+GHHGNT EL QLLPIL+
Sbjct: 205 QESMAKWKIVVGHHTIKSAGHHGNTIELEKQLLPILE 241
>sp|Q8H129|PPA3_ARATH Purple acid phosphatase 3 OS=Arabidopsis thaliana GN=PAP3 PE=2 SV=1
Length = 366
Score = 325 bits (832), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 180/215 (83%), Gaps = 1/215 (0%)
Query: 22 SSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNF 81
S+AEL P+K DG++SFLV+GDWGRRG+YNQ++VA QMG +GEKL IDF+ISTGDNF
Sbjct: 57 STAELRRLLQPSKTDGTVSFLVIGDWGRRGSYNQSQVALQMGEIGEKLDIDFVISTGDNF 116
Query: 82 YDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLC 141
YD+GLT + D F +SF NIYTAPSL K WY+VLGNHDYRGDV AQLSP+LR +D+RW+C
Sbjct: 117 YDNGLTSLHDPLFQDSFTNIYTAPSLQKPWYSVLGNHDYRGDVRAQLSPMLRALDNRWVC 176
Query: 142 LRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKE 201
+RSFIVNAEI + FVDTTPFV+KYF P HVYDWSG+ PR++YL NLLK+ +D AL+E
Sbjct: 177 MRSFIVNAEIVDLFFVDTTPFVDKYFIQPNKHVYDWSGVLPRQTYLNNLLKE-LDVALRE 235
Query: 202 STAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQ 236
S AKWKIV+GHHTIKS+GHHGNT EL LLPILQ
Sbjct: 236 SVAKWKIVIGHHTIKSAGHHGNTIELEKHLLPILQ 270
>sp|Q8VYU7|PPA4_ARATH Purple acid phosphatase 4 OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1
Length = 339
Score = 304 bits (778), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 143/236 (60%), Positives = 180/236 (76%), Gaps = 1/236 (0%)
Query: 2 SLTLIITFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQ 61
SL++++T + L + AEL +H PDGS+SFLV+GDWGR G YNQ++VA Q
Sbjct: 9 SLSIVMTLLICFLLLSLAPKLEAELATVQHAPNPDGSISFLVIGDWGRHGLYNQSQVALQ 68
Query: 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121
MG +GE++ I+F++STGDN YD+G+ +DD AF SF NIYT+PSL K WY VLGNHDYR
Sbjct: 69 MGRIGEEMDINFVVSTGDNIYDNGMKSIDDPAFQLSFSNIYTSPSLQKPWYLVLGNHDYR 128
Query: 122 GDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQ 181
GDVEAQLSP+LR +DSRW+C+RSFIV+AEIAE FVDTTPFV+ YF P+D YDWSG+
Sbjct: 129 GDVEAQLSPILRSMDSRWICMRSFIVDAEIAELFFVDTTPFVDAYFLSPQDQTYDWSGVS 188
Query: 182 PRKSYLANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQV 237
PRKSYL +L + ++ L+ES+AKWKIVVGHH IKS+ HGNT EL LLPIL+
Sbjct: 189 PRKSYLQTILTE-LEMGLRESSAKWKIVVGHHAIKSASIHGNTKELESLLLPILEA 243
>sp|Q9SCX8|PPA17_ARATH Purple acid phosphatase 17 OS=Arabidopsis thaliana GN=PAP17 PE=2
SV=1
Length = 338
Score = 300 bits (769), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/236 (59%), Positives = 183/236 (77%), Gaps = 2/236 (0%)
Query: 1 MSLTLIITFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAH 60
MS T ++ + + + +V S+ EL F PAK DGS+SF+V+GDWGRRG++NQ+ VA+
Sbjct: 9 MSATASLSLLLCIFTTFVVV-SNGELQRFIEPAKSDGSVSFIVIGDWGRRGSFNQSLVAY 67
Query: 61 QMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120
QMG +GEK+ +DF++STGDNFYD+GL D F +SF NIYTAPSL KQWY+VLGNHDY
Sbjct: 68 QMGKIGEKIDLDFVVSTGDNFYDNGLFSEHDPNFEQSFSNIYTAPSLQKQWYSVLGNHDY 127
Query: 121 RGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGI 180
RGD EAQLS VLR+IDSRW+CLRSF+V+AE+ E FVDTTPFV +Y+T+ + H YDW +
Sbjct: 128 RGDAEAQLSSVLREIDSRWICLRSFVVDAELVEMFFVDTTPFVKEYYTEADGHSYDWRAV 187
Query: 181 QPRKSYLANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQ 236
R SY+ LL+ D++ +LK S A+WKIVVGHH ++S GHHG+T ELN +LLPIL+
Sbjct: 188 PSRNSYVKALLR-DLEVSLKSSKARWKIVVGHHAMRSIGHHGDTKELNEELLPILK 242
>sp|Q8S341|PPA7_ARATH Purple acid phosphatase 7 OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 328
Score = 291 bits (744), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 138/238 (57%), Positives = 176/238 (73%), Gaps = 3/238 (1%)
Query: 1 MSLTLIITFIALLGSLYVFCPSSAELPWFEHPAKP--DGSLSFLVVGDWGRRGAYNQTKV 58
M + + + I + S++ + ++L +HP K DGSLSFLV+GDWGR+G +NQ+ V
Sbjct: 1 MKMHVCFSVILMFLSIFFINGALSKLERLKHPVKKKSDGSLSFLVIGDWGRKGGFNQSLV 60
Query: 59 AHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118
AHQMG+VGEKL IDF+IS GDNFYDDGL GV+D +F SF +IYT PSL KQWY+VLGNH
Sbjct: 61 AHQMGVVGEKLDIDFVISVGDNFYDDGLKGVNDPSFEASFSHIYTHPSLQKQWYSVLGNH 120
Query: 119 DYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWS 178
DYRG+VEAQLS VL D RW C RSF++++ + +F F DT PFV KYFT+PEDH YDW
Sbjct: 121 DYRGNVEAQLSKVLTQKDWRWFCRRSFVLSSGMVDFFFADTNPFVEKYFTEPEDHTYDWR 180
Query: 179 GIQPRKSYLANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQ 236
+ PR Y++NLL D+D +K+S A WK VVGHH IK++G+HG T EL QLLPIL+
Sbjct: 181 NVLPRNKYISNLL-HDLDLEIKKSRATWKFVVGHHGIKTAGNHGVTQELVDQLLPILE 237
>sp|P13686|PPA5_HUMAN Tartrate-resistant acid phosphatase type 5 OS=Homo sapiens GN=ACP5
PE=1 SV=3
Length = 325
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 32 PAKPDGS---LSFLVVGDWG---------RRGAYNQTKVAHQMGIVGEKLKIDFIISTGD 79
P+ DG+ L F+ VGDWG R N ++A + I+G DFI+S GD
Sbjct: 16 PSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGA----DFILSLGD 71
Query: 80 NFYDDGLTGVDDAAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSR 138
NFY G+ ++D F E+F ++++ SL K WY + GNHD+ G+V AQ++ I R
Sbjct: 72 NFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIA--YSKISKR 129
Query: 139 W--------LCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANL 190
W L + N +A F+ +DT D +PR LA
Sbjct: 130 WNFPSPFYRLHFKIPQTNVSVAIFM-LDTVTLCGN-----SDDFLSQQPERPRDVKLART 183
Query: 191 LKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPIL 235
+ L + + +V GH+ + S HG TH L QL P+L
Sbjct: 184 QLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLL 228
>sp|P09889|PPA5_PIG Tartrate-resistant acid phosphatase type 5 OS=Sus scrofa GN=ACP5
PE=1 SV=4
Length = 340
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 35 PDGSLSFLVVGDWGRRGAYN-------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLT 87
P L F+ VGDWG G N + A + + L DFI+S GDNFY G+
Sbjct: 30 PTPILRFVAVGDWG--GVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVH 87
Query: 88 GVDDAAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSRW------L 140
D F E+F ++++ PSL W+ + GNHD+ G+V AQ++ I RW
Sbjct: 88 DAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIA--YSKISKRWNFPSPYY 145
Query: 141 CLRSFIVNAEIAEFIFV-DTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSAL 199
LR I + ++ IF+ DT D +PR LA + L
Sbjct: 146 RLRFKIPRSNVSVAIFMLDTVTLCGN-----SDDFVSQQPERPRNLALARTQLAWIKKQL 200
Query: 200 KESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPIL---QVIYYLI 242
+ + +V GH+ + S HG TH L QLLP+L +V YL
Sbjct: 201 AAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLC 246
>sp|O97860|PPA5_RABIT Tartrate-resistant acid phosphatase type 5 OS=Oryctolagus cuniculus
GN=ACP5 PE=2 SV=1
Length = 325
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 27 PWFEHPAKPDGSLSFLVVGDWGRRGAYN-------QTKVAHQMGIVGEKLKIDFIISTGD 79
PW E A P +L F+ VGDWG G N + A Q+G V + L FI+S GD
Sbjct: 17 PWAEG-ATP--TLRFVAVGDWG--GVPNAPFHTAREMANAKQIGKVVQMLGAHFILSLGD 71
Query: 80 NFYDDGLTGVDDAAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSR 138
NFY G+ V D F E+F ++++ SL WY + GNHD+ G+V AQ++ + R
Sbjct: 72 NFYFSGVQSVSDKRFQETFEDVFSDRSLQNVPWYVLAGNHDHIGNVSAQIA--YSKVSKR 129
Query: 139 W--------LCLRSFIVNAEIAEFIFVDTTPFV---NKYFT-DPEDHVYDWSGIQPRKSY 186
W L R N +A ++ +DT N + + PE +PR
Sbjct: 130 WNFPSPFYRLRFRIPRTNVSVAIYM-LDTVTLCGNSNDFLSQQPE---------RPRNLE 179
Query: 187 LANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPIL 235
LA + L ++ + +V GH+ + S HG TH L +L P+L
Sbjct: 180 LARTQLAWLKRHLADAKEDYVLVAGHYPVWSIAEHGPTHCLVKKLQPLL 228
>sp|Q05117|PPA5_MOUSE Tartrate-resistant acid phosphatase type 5 OS=Mus musculus GN=Acp5
PE=2 SV=2
Length = 327
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 26 LPWFEHPAKPDGSLSFLVVGDWG---------RRGAYNQTKVAHQMGIVGEKLKIDFIIS 76
LP H P +L F+ VGDWG R N ++A + +G DFI+S
Sbjct: 15 LPLLTHGTAPTPTLRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQTMGA----DFIMS 70
Query: 77 TGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDI 135
GDNFY G+ D F E+F ++++ +L WY + GNHD+ G+V AQ++ I
Sbjct: 71 LGDNFYFTGVHDASDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA--YSKI 128
Query: 136 DSRW------LCLRSFIVNAEIAEFIFV-DTTPFVNKYFTDPEDHVYDWSGIQPRKSYLA 188
RW LR I I IF+ DT D PR +A
Sbjct: 129 SKRWNFPSPYYRLRFKIPRTNITVAIFMLDTVMLCGN-----SDDFASQQPKMPRDLGVA 183
Query: 189 NLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPIL 235
+ L + + +V GH+ I S HG T L L P+L
Sbjct: 184 RTQLSWLKKQLAAAKEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLL 230
>sp|P29288|PPA5_RAT Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus
GN=Acp5 PE=1 SV=1
Length = 327
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 31 HPAKPDGSLSFLVVGDWG---------RRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNF 81
H P +L F+ VGDWG R N ++A + I+G DFI+S GDNF
Sbjct: 20 HCTAPASTLRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQIMGA----DFIMSLGDNF 75
Query: 82 YDDGLTGVDDAAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSRW- 139
Y G+ +D F E+F ++++ +L WY + GNHD+ G+V AQ++ I RW
Sbjct: 76 YFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA--YSKISKRWN 133
Query: 140 -----LCLRSFIVNAEIAEFIFV--------DTTPFVNKYFTDPEDHVYDWSGIQPRKSY 186
LR + + I IF+ ++ FV++ P D + ++
Sbjct: 134 FPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSDDFVSQQPEMPRD-------LGVARTQ 186
Query: 187 LANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPIL 235
L+ L KQ L + + +V GH+ I S HG T L L P+L
Sbjct: 187 LSWLKKQ-----LAAAKEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLL 230
>sp|P97499|TEP1_MOUSE Telomerase protein component 1 OS=Mus musculus GN=Tep1 PE=1 SV=1
Length = 2629
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 20/141 (14%)
Query: 9 FIALLGSLYVFCPSSAELPWFEHP------AKPDG-SLSFLVVGDWGRRGAYNQTKVAHQ 61
F+ +LGS Y + P S +LP +HP P G S++ + V + RG +Q
Sbjct: 978 FVGILGSRYGYIPPSYDLP--DHPHFHWTHEYPSGRSVTEMEVMQFLNRGQRSQPSAQAL 1035
Query: 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIY-------TAPSLAKQWYNV 114
+ DF+ S D + D ++ ++AA S + Y T S + +W V
Sbjct: 1036 IYFRDP----DFLSSVPDAWKPDFISESEEAAHRVSELKRYLHEQKEVTCRSYSCEWGGV 1091
Query: 115 LGNHDYRGDVEAQLSPVLRDI 135
Y G +E VL+D+
Sbjct: 1092 AAGRPYTGGLEEFGQLVLQDV 1112
>sp|P04871|PYHD_NPVAC Polyhedrin OS=Autographa californica nuclear polyhedrosis virus
GN=PH PE=1 SV=1
Length = 245
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 64 IVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGD 123
+VG K K +F T F +D V+D + F+ + P+ + Y L H R D
Sbjct: 86 VVGWKGK-EFYRETWTRFMEDSFPIVNDQEVMDVFLVVNMRPTRPNRCYKFLAQHALRCD 144
Query: 124 VEAQLSPVLRDIDSRWL 140
+ V+R ++ W+
Sbjct: 145 PDYVPHDVIRIVEPSWV 161
>sp|Q84LR6|PPA14_ARATH Probable inactive purple acid phosphatase 14 OS=Arabidopsis
thaliana GN=PAP14 PE=2 SV=1
Length = 401
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 70 KIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAK--QWYNVLGNHDYRGDVEAQ 127
K D I+ +GDN Y GL D A +++ AP++ W +LGNHD D+ +
Sbjct: 92 KPDLIVFSGDNVY--GLCETSDVA---KSMDMAFAPAIESGIPWVAILGNHDQESDMTRE 146
>sp|A6V1X0|MNMC_PSEA7 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Pseudomonas aeruginosa (strain PA7)
GN=mnmC PE=3 SV=1
Length = 654
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 12 LLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVG 45
+LG Y P+SA PW+ PA G + LVVG
Sbjct: 229 MLGGTYQGPPASAGKPWYARPAPHAGRRAALVVG 262
>sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1
Length = 481
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 28 WFEHPAK--PDGSLSFLVVGDWGRRGAYNQ-TKVAHQMGIVGEKLKIDFIISTGDNFYDD 84
WF P + PD S +F ++GD G+ YN + + H M G+ ++ GD Y D
Sbjct: 148 WFHTPPQIHPDASYTFGIIGDLGQ--TYNSLSTLEHYMKSKGQT-----VLFVGDLSYAD 200
Query: 85 GLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH--DYRGDV 124
+ ++ ++S+ + W +GNH +YR D+
Sbjct: 201 RYS-CNNGTRWDSWGRFVERSVAYQPWIWTVGNHEIEYRPDL 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,504,784
Number of Sequences: 539616
Number of extensions: 4083961
Number of successful extensions: 8368
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8335
Number of HSP's gapped (non-prelim): 21
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)