Query 026017
Match_columns 244
No_of_seqs 188 out of 1385
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 02:44:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026017.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026017hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2679 Purple (tartrate-resis 100.0 3.7E-47 8E-52 311.1 16.2 220 19-239 24-243 (336)
2 PTZ00422 glideosome-associated 100.0 1.4E-36 3E-41 266.8 18.8 189 33-239 21-248 (394)
3 cd07378 MPP_ACP5 Homo sapiens 100.0 1.6E-30 3.5E-35 222.7 18.3 196 39-241 1-203 (277)
4 PLN02533 probable purple acid 99.9 1.2E-26 2.5E-31 209.3 15.9 191 18-243 120-326 (427)
5 cd00839 MPP_PAPs purple acid p 99.9 2.7E-25 5.9E-30 191.8 17.1 182 36-243 2-197 (294)
6 KOG1378 Purple acid phosphatas 99.9 9.2E-25 2E-29 192.8 14.7 194 18-244 126-337 (452)
7 cd07395 MPP_CSTP1 Homo sapiens 99.9 1.9E-22 4.1E-27 171.5 14.1 182 36-240 2-207 (262)
8 cd07396 MPP_Nbla03831 Homo sap 99.9 5.5E-21 1.2E-25 163.1 13.8 188 39-241 1-217 (267)
9 PRK11148 cyclic 3',5'-adenosin 99.8 4.1E-20 8.8E-25 158.4 12.9 180 29-241 5-196 (275)
10 cd07402 MPP_GpdQ Enterobacter 99.8 1.2E-19 2.6E-24 152.1 12.3 169 40-239 1-181 (240)
11 cd07401 MPP_TMEM62_N Homo sapi 99.8 3.5E-19 7.5E-24 151.1 13.3 181 41-240 2-199 (256)
12 cd07399 MPP_YvnB Bacillus subt 99.8 5.6E-18 1.2E-22 140.0 11.9 140 39-241 1-150 (214)
13 cd00842 MPP_ASMase acid sphing 99.7 5.6E-17 1.2E-21 140.3 13.7 174 55-242 52-250 (296)
14 cd08163 MPP_Cdc1 Saccharomyces 99.7 2.6E-17 5.6E-22 139.4 9.0 136 62-218 37-176 (257)
15 TIGR03767 P_acnes_RR metalloph 99.6 1.8E-14 3.9E-19 129.4 11.2 83 143-242 292-382 (496)
16 PF00149 Metallophos: Calcineu 99.6 5.9E-15 1.3E-19 114.8 6.9 187 39-243 1-192 (200)
17 cd07383 MPP_Dcr2 Saccharomyces 99.5 1.4E-13 2.9E-18 112.5 10.6 115 37-218 1-128 (199)
18 TIGR03729 acc_ester putative p 99.5 7E-13 1.5E-17 111.4 13.0 161 40-217 1-177 (239)
19 COG1409 Icc Predicted phosphoh 99.5 7.8E-13 1.7E-17 113.4 12.9 151 39-220 1-158 (301)
20 cd07392 MPP_PAE1087 Pyrobaculu 99.4 5.2E-13 1.1E-17 107.3 9.4 136 41-217 1-136 (188)
21 cd07393 MPP_DR1119 Deinococcus 99.4 2.8E-12 6.1E-17 107.3 11.7 163 42-219 2-179 (232)
22 PF09423 PhoD: PhoD-like phosp 99.4 4.1E-12 8.9E-17 116.2 10.9 209 21-238 87-362 (453)
23 PRK11340 phosphodiesterase Yae 99.3 6E-11 1.3E-15 101.5 14.6 81 34-122 45-126 (271)
24 TIGR03768 RPA4764 metallophosp 99.3 2E-11 4.4E-16 109.0 10.9 88 144-242 294-401 (492)
25 cd07388 MPP_Tt1561 Thermus the 99.3 1E-10 2.2E-15 97.0 14.2 158 37-229 3-173 (224)
26 KOG3662 Cell division control 99.2 1.2E-10 2.6E-15 102.8 12.2 123 34-164 44-185 (410)
27 cd07385 MPP_YkuE_C Bacillus su 99.2 1.3E-10 2.8E-15 96.2 11.2 77 38-123 1-78 (223)
28 cd00840 MPP_Mre11_N Mre11 nucl 99.2 4.3E-10 9.3E-15 92.8 13.1 149 40-218 1-170 (223)
29 COG3540 PhoD Phosphodiesterase 99.2 6.3E-11 1.4E-15 105.2 8.4 186 25-216 126-366 (522)
30 KOG1432 Predicted DNA repair e 99.1 8.3E-10 1.8E-14 94.6 12.6 162 34-215 49-261 (379)
31 cd07404 MPP_MS158 Microscilla 98.9 1.5E-09 3.2E-14 85.9 4.9 68 41-121 1-68 (166)
32 KOG3770 Acid sphingomyelinase 98.8 1.8E-07 3.9E-12 85.7 16.8 145 57-217 196-371 (577)
33 cd08166 MPP_Cdc1_like_1 unchar 98.8 3.5E-08 7.6E-13 79.8 8.0 54 67-123 39-95 (195)
34 COG0420 SbcD DNA repair exonuc 98.7 6.4E-08 1.4E-12 87.0 7.8 80 39-123 1-90 (390)
35 cd08165 MPP_MPPE1 human MPPE1 98.7 7.6E-08 1.7E-12 75.6 7.0 79 42-122 1-90 (156)
36 cd07400 MPP_YydB Bacillus subt 98.6 1.1E-07 2.3E-12 73.3 7.4 74 41-120 1-80 (144)
37 cd07397 MPP_DevT Myxococcus xa 98.6 6.7E-07 1.5E-11 74.7 12.2 65 39-123 1-65 (238)
38 TIGR00619 sbcd exonuclease Sbc 98.6 1E-07 2.2E-12 80.8 6.9 79 39-122 1-89 (253)
39 PHA02546 47 endonuclease subun 98.6 1.5E-07 3.3E-12 83.1 7.9 79 39-121 1-89 (340)
40 PRK10966 exonuclease subunit S 98.6 1.7E-07 3.8E-12 84.5 7.8 80 39-123 1-89 (407)
41 PF14582 Metallophos_3: Metall 98.5 3.1E-06 6.7E-11 69.3 11.5 177 39-243 6-210 (255)
42 cd07389 MPP_PhoD Bacillus subt 98.4 1.2E-06 2.7E-11 72.7 9.4 96 68-163 27-169 (228)
43 cd07384 MPP_Cdc1_like Saccharo 98.4 3.1E-07 6.7E-12 73.3 5.4 63 59-123 34-102 (171)
44 TIGR00583 mre11 DNA repair pro 98.4 1E-06 2.3E-11 79.2 9.2 50 37-88 2-59 (405)
45 PF12850 Metallophos_2: Calcin 98.4 7.9E-07 1.7E-11 69.0 6.9 92 39-162 1-92 (156)
46 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.4 8.6E-06 1.9E-10 69.3 12.6 160 41-224 1-184 (262)
47 COG1408 Predicted phosphohydro 98.3 2.9E-06 6.2E-11 73.0 8.8 81 35-124 41-121 (284)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.3 1.7E-06 3.6E-11 72.3 6.9 79 42-122 2-82 (231)
49 PRK09453 phosphodiesterase; Pr 98.3 2.3E-06 5E-11 68.8 7.1 74 39-121 1-76 (182)
50 PRK05340 UDP-2,3-diacylglucosa 98.3 2.2E-06 4.8E-11 72.1 7.0 79 40-122 2-84 (241)
51 cd07391 MPP_PF1019 Pyrococcus 98.3 2.9E-06 6.4E-11 67.6 7.4 76 42-122 1-89 (172)
52 PHA02239 putative protein phos 98.2 3E-06 6.6E-11 70.9 6.9 70 40-120 2-72 (235)
53 COG2129 Predicted phosphoester 98.2 5E-05 1.1E-09 62.2 13.3 74 37-121 2-77 (226)
54 TIGR00040 yfcE phosphoesterase 98.2 4.9E-06 1.1E-10 65.3 6.9 87 39-160 1-87 (158)
55 cd00838 MPP_superfamily metall 98.2 3.5E-06 7.7E-11 62.5 5.7 69 42-119 1-69 (131)
56 cd00841 MPP_YfcE Escherichia c 98.1 6.6E-06 1.4E-10 64.1 6.3 85 40-161 1-85 (155)
57 cd07379 MPP_239FB Homo sapiens 98.1 5.5E-06 1.2E-10 63.2 5.2 63 40-122 1-64 (135)
58 PRK00166 apaH diadenosine tetr 98.1 8.4E-06 1.8E-10 69.8 6.6 67 40-120 2-68 (275)
59 cd08164 MPP_Ted1 Saccharomyces 98.1 1.1E-05 2.3E-10 65.3 6.6 59 62-123 36-113 (193)
60 COG1768 Predicted phosphohydro 98.1 7.6E-05 1.7E-09 59.0 10.9 50 70-127 43-92 (230)
61 cd07424 MPP_PrpA_PrpB PrpA and 98.0 1.7E-05 3.7E-10 65.1 6.4 66 40-121 2-67 (207)
62 TIGR00024 SbcD_rel_arch putati 98.0 2.4E-05 5.3E-10 65.1 7.2 75 39-121 15-102 (225)
63 PRK11439 pphA serine/threonine 97.9 2.1E-05 4.6E-10 65.1 5.8 65 40-120 18-82 (218)
64 cd07422 MPP_ApaH Escherichia c 97.9 2.8E-05 6.1E-10 65.9 6.3 66 42-121 2-67 (257)
65 cd07425 MPP_Shelphs Shewanella 97.9 2.4E-05 5.3E-10 64.3 5.3 72 42-121 1-80 (208)
66 PRK13625 bis(5'-nucleosyl)-tet 97.8 3.1E-05 6.7E-10 65.3 5.9 69 40-120 2-78 (245)
67 cd07394 MPP_Vps29 Homo sapiens 97.8 5.6E-05 1.2E-09 60.6 7.0 87 40-160 1-87 (178)
68 cd07413 MPP_PA3087 Pseudomonas 97.8 4.2E-05 9.2E-10 63.5 6.4 68 41-120 1-75 (222)
69 cd07421 MPP_Rhilphs Rhilph pho 97.8 6.5E-05 1.4E-09 64.5 7.1 71 40-120 3-79 (304)
70 cd07423 MPP_PrpE Bacillus subt 97.8 5E-05 1.1E-09 63.6 5.7 69 40-120 2-79 (234)
71 cd07390 MPP_AQ1575 Aquifex aeo 97.8 9.4E-05 2E-09 58.7 7.0 69 42-122 2-83 (168)
72 cd00144 MPP_PPP_family phospho 97.8 6E-05 1.3E-09 62.3 6.1 68 42-121 1-68 (225)
73 PRK09968 serine/threonine-spec 97.8 6.2E-05 1.3E-09 62.4 6.1 65 40-120 16-80 (218)
74 PRK04036 DNA polymerase II sma 97.7 0.00018 3.9E-09 66.9 9.3 88 34-122 239-344 (504)
75 COG1407 Predicted ICC-like pho 97.7 0.00018 3.9E-09 59.7 8.2 80 38-122 19-111 (235)
76 TIGR00668 apaH bis(5'-nucleosy 97.7 0.00011 2.3E-09 62.9 6.1 67 40-120 2-68 (279)
77 cd07408 MPP_SA0022_N Staphyloc 97.6 0.0015 3.3E-08 55.4 13.2 78 39-123 1-84 (257)
78 cd07386 MPP_DNA_pol_II_small_a 97.6 0.00021 4.5E-09 60.1 7.7 80 42-122 2-95 (243)
79 cd00845 MPP_UshA_N_like Escher 97.6 0.0024 5.2E-08 53.7 13.9 78 39-123 1-84 (252)
80 cd07398 MPP_YbbF-LpxH Escheric 97.6 8.3E-05 1.8E-09 61.0 4.8 78 42-122 1-83 (217)
81 TIGR00282 metallophosphoestera 97.5 0.003 6.6E-08 53.8 13.4 73 39-123 1-73 (266)
82 cd07410 MPP_CpdB_N Escherichia 97.5 0.0037 8.1E-08 53.5 13.2 27 190-217 171-197 (277)
83 cd07382 MPP_DR1281 Deinococcus 97.4 0.004 8.6E-08 52.8 12.9 72 40-123 1-72 (255)
84 cd07406 MPP_CG11883_N Drosophi 97.4 0.004 8.7E-08 52.8 12.2 78 39-123 1-85 (257)
85 cd07403 MPP_TTHA0053 Thermus t 97.4 0.00033 7.2E-09 53.1 5.1 55 42-119 1-56 (129)
86 COG0622 Predicted phosphoester 97.4 0.00068 1.5E-08 54.0 7.0 90 39-161 2-91 (172)
87 cd07407 MPP_YHR202W_N Saccharo 97.3 0.014 3E-07 50.3 15.0 24 194-217 178-201 (282)
88 cd07411 MPP_SoxB_N Thermus the 97.3 0.011 2.4E-07 50.3 14.0 44 39-82 1-63 (264)
89 cd07420 MPP_RdgC Drosophila me 97.2 0.00074 1.6E-08 59.0 6.1 71 40-121 52-123 (321)
90 COG2908 Uncharacterized protei 97.1 0.00064 1.4E-08 56.3 4.3 76 42-121 1-80 (237)
91 smart00156 PP2Ac Protein phosp 97.1 0.0015 3.2E-08 55.9 6.4 70 40-121 29-99 (271)
92 cd07416 MPP_PP2B PP2B, metallo 97.0 0.002 4.4E-08 56.1 6.4 70 40-121 44-114 (305)
93 COG1692 Calcineurin-like phosp 97.0 0.043 9.4E-07 45.7 13.7 72 39-122 1-72 (266)
94 cd07418 MPP_PP7 PP7, metalloph 96.9 0.0021 4.6E-08 57.3 6.2 71 39-121 66-138 (377)
95 cd07380 MPP_CWF19_N Schizosacc 96.9 0.0035 7.6E-08 48.8 6.6 66 42-119 1-68 (150)
96 COG4186 Predicted phosphoester 96.8 0.0052 1.1E-07 47.6 6.8 72 40-122 5-87 (186)
97 KOG2310 DNA repair exonuclease 96.8 0.0069 1.5E-07 55.6 8.7 49 36-85 11-67 (646)
98 cd07414 MPP_PP1_PPKL PP1, PPKL 96.8 0.0031 6.8E-08 54.6 6.0 70 40-121 51-121 (293)
99 cd07415 MPP_PP2A_PP4_PP6 PP2A, 96.7 0.0028 6.2E-08 54.6 5.5 70 40-121 43-113 (285)
100 cd07417 MPP_PP5_C PP5, C-termi 96.7 0.003 6.6E-08 55.2 5.6 72 39-121 60-132 (316)
101 PTZ00244 serine/threonine-prot 96.6 0.0032 7E-08 54.5 5.2 69 41-121 54-123 (294)
102 COG0737 UshA 5'-nucleotidase/2 96.6 0.17 3.7E-06 47.3 16.5 87 32-123 20-117 (517)
103 PTZ00480 serine/threonine-prot 96.6 0.005 1.1E-07 53.8 5.8 70 40-121 60-130 (320)
104 PTZ00239 serine/threonine prot 96.5 0.0059 1.3E-07 53.1 5.8 69 41-121 45-114 (303)
105 PRK09558 ushA bifunctional UDP 96.3 0.023 4.9E-07 53.6 9.1 83 35-123 31-123 (551)
106 PRK09419 bifunctional 2',3'-cy 96.2 0.019 4.1E-07 58.8 8.2 81 35-123 657-738 (1163)
107 cd07409 MPP_CD73_N CD73 ecto-5 96.1 0.18 3.8E-06 43.4 13.0 78 39-123 1-96 (281)
108 cd07419 MPP_Bsu1_C Arabidopsis 96.1 0.016 3.4E-07 50.7 6.3 70 41-121 50-127 (311)
109 KOG2863 RNA lariat debranching 96.1 0.15 3.3E-06 44.9 12.0 167 40-227 2-189 (456)
110 cd07405 MPP_UshA_N Escherichia 95.9 0.28 6.1E-06 42.2 13.4 79 39-123 1-89 (285)
111 cd07412 MPP_YhcR_N Bacillus su 95.7 0.03 6.5E-07 48.3 6.3 80 39-123 1-90 (288)
112 COG1311 HYS2 Archaeal DNA poly 95.6 0.076 1.7E-06 48.4 8.7 90 34-124 221-324 (481)
113 PF13277 YmdB: YmdB-like prote 95.5 0.2 4.3E-06 42.2 10.4 70 42-123 1-70 (253)
114 PRK09419 bifunctional 2',3'-cy 95.3 0.16 3.4E-06 52.2 10.8 47 35-82 38-97 (1163)
115 KOG4419 5' nucleotidase [Nucle 94.7 0.39 8.4E-06 45.0 10.5 108 9-123 10-136 (602)
116 KOG0374 Serine/threonine speci 93.8 0.16 3.4E-06 44.8 6.0 72 40-122 60-132 (331)
117 cd08162 MPP_PhoA_N Synechococc 93.8 0.19 4.1E-06 43.9 6.5 43 39-81 1-49 (313)
118 PRK09418 bifunctional 2',3'-cy 93.8 0.47 1E-05 46.6 9.7 47 35-81 36-94 (780)
119 cd07387 MPP_PolD2_C PolD2 (DNA 93.7 1.6 3.5E-05 37.1 11.7 56 108-163 94-155 (257)
120 TIGR01530 nadN NAD pyrophospha 93.6 0.3 6.5E-06 46.1 7.9 79 39-123 1-96 (550)
121 COG5555 Cytolysin, a secreted 93.4 0.14 2.9E-06 43.8 4.6 123 73-215 129-280 (392)
122 KOG3947 Phosphoesterases [Gene 93.3 0.17 3.6E-06 43.0 5.0 72 33-123 56-128 (305)
123 PF04042 DNA_pol_E_B: DNA poly 92.4 0.1 2.2E-06 42.6 2.6 122 41-162 1-139 (209)
124 PRK09420 cpdB bifunctional 2', 91.5 1.5 3.3E-05 42.3 9.8 46 36-81 23-80 (649)
125 PRK11907 bifunctional 2',3'-cy 91.2 1.1 2.5E-05 44.1 8.7 46 36-81 113-170 (814)
126 KOG0372 Serine/threonine speci 91.0 0.39 8.6E-06 40.2 4.5 68 41-122 45-115 (303)
127 TIGR01390 CycNucDiestase 2',3' 89.8 0.97 2.1E-05 43.4 6.8 44 38-81 2-57 (626)
128 PTZ00235 DNA polymerase epsilo 89.2 2 4.4E-05 37.0 7.6 84 34-121 23-122 (291)
129 KOG0371 Serine/threonine prote 87.8 0.98 2.1E-05 38.2 4.5 69 40-121 61-131 (319)
130 KOG2476 Uncharacterized conser 85.9 3.4 7.3E-05 37.8 7.2 69 39-118 6-75 (528)
131 KOG0373 Serine/threonine speci 75.2 6.1 0.00013 32.7 4.7 67 41-121 48-117 (306)
132 KOG0375 Serine-threonine phosp 73.3 9.9 0.00021 33.8 5.8 68 41-121 90-159 (517)
133 PF09049 SNN_transmemb: Stanni 71.4 4.7 0.0001 22.0 2.2 17 4-20 14-32 (33)
134 PF03823 Neurokinin_B: Neuroki 65.3 9 0.0002 24.3 2.9 33 1-33 1-33 (59)
135 COG4594 FecB ABC-type Fe3+-cit 62.3 7 0.00015 33.1 2.6 26 1-26 3-28 (310)
136 KOG3818 DNA polymerase epsilon 60.1 56 0.0012 30.0 7.9 85 34-123 278-371 (525)
137 COG0381 WecB UDP-N-acetylgluco 58.4 24 0.00053 31.7 5.4 42 60-115 82-123 (383)
138 PF09587 PGA_cap: Bacterial ca 57.7 1.1E+02 0.0024 25.4 10.4 21 194-214 172-194 (250)
139 PF02350 Epimerase_2: UDP-N-ac 53.0 29 0.00062 30.7 5.1 42 62-117 59-100 (346)
140 COG2047 Uncharacterized protei 51.9 40 0.00086 28.1 5.2 55 25-81 73-127 (258)
141 PRK14762 membrane protein; Pro 49.5 22 0.00048 18.6 2.2 15 5-19 6-20 (27)
142 TIGR03413 GSH_gloB hydroxyacyl 47.5 23 0.0005 29.7 3.5 45 73-121 120-167 (248)
143 PRK15396 murein lipoprotein; P 46.7 18 0.00039 24.8 2.2 26 1-26 1-27 (78)
144 PRK11548 outer membrane biogen 42.3 28 0.00061 25.5 2.8 24 1-24 1-24 (113)
145 PF11119 DUF2633: Protein of u 42.1 21 0.00045 23.0 1.8 17 2-18 11-28 (59)
146 PRK14347 lipoate-protein ligas 40.9 70 0.0015 26.3 5.2 35 188-223 18-52 (209)
147 PF14981 FAM165: FAM165 family 39.8 29 0.00063 21.1 2.0 19 3-21 6-26 (51)
148 PF10686 DUF2493: Protein of u 38.7 1.2E+02 0.0026 20.2 5.3 39 38-80 3-41 (71)
149 PF06129 Chordopox_G3: Chordop 38.7 31 0.00068 25.2 2.5 19 1-19 1-19 (109)
150 CHL00020 psbN photosystem II p 37.9 36 0.00078 20.4 2.2 10 18-27 26-35 (43)
151 PRK14341 lipoate-protein ligas 37.8 82 0.0018 26.0 5.2 35 188-223 20-54 (213)
152 PF06874 FBPase_2: Firmicute f 35.7 47 0.001 31.8 3.8 49 61-120 175-223 (640)
153 PRK13791 lysozyme inhibitor; P 35.3 65 0.0014 23.7 3.8 34 13-46 16-49 (113)
154 KOG2126 Glycosylphosphatidylin 35.3 59 0.0013 32.4 4.5 62 150-224 210-272 (895)
155 PRK10834 vancomycin high tempe 34.7 1.8E+02 0.0039 24.5 6.8 41 40-81 47-92 (239)
156 PF14979 TMEM52: Transmembrane 34.6 1.2E+02 0.0025 23.5 5.1 44 3-46 24-73 (154)
157 PRK10241 hydroxyacylglutathion 34.6 45 0.00097 28.0 3.2 44 74-121 122-168 (251)
158 TIGR03850 bind_CPR_0540 carboh 34.6 2.1E+02 0.0045 25.7 7.8 35 9-46 9-43 (437)
159 PF02419 PsbL: PsbL protein; 33.8 47 0.001 19.1 2.1 16 2-17 16-31 (37)
160 PF06792 UPF0261: Uncharacteri 33.6 2.6E+02 0.0056 25.5 8.0 16 107-122 269-284 (403)
161 PRK14758 hypothetical protein; 32.7 51 0.0011 17.5 2.0 14 3-16 7-20 (27)
162 KOG0376 Serine-threonine phosp 31.9 39 0.00085 31.2 2.6 75 35-121 210-286 (476)
163 COG3521 Predicted component of 31.8 1.4E+02 0.003 23.4 5.3 35 7-49 8-42 (159)
164 PRK14345 lipoate-protein ligas 31.0 1.1E+02 0.0024 25.6 4.9 35 188-223 27-61 (234)
165 TIGR03568 NeuC_NnaA UDP-N-acet 31.0 1.1E+02 0.0025 27.1 5.4 45 62-120 85-130 (365)
166 PRK10781 rcsF outer membrane l 30.9 78 0.0017 24.1 3.6 27 1-27 1-27 (133)
167 PF15339 Afaf: Acrosome format 29.8 45 0.00097 26.5 2.2 13 7-19 142-154 (200)
168 COG2949 SanA Uncharacterized m 29.6 2.7E+02 0.0059 23.1 6.7 25 56-81 80-104 (235)
169 COG2237 Predicted membrane pro 29.5 1.4E+02 0.0031 26.7 5.5 46 36-81 64-109 (364)
170 PRK13183 psbN photosystem II r 29.2 67 0.0014 19.6 2.4 10 18-27 29-38 (46)
171 PRK14348 lipoate-protein ligas 29.1 1.4E+02 0.0031 24.8 5.2 37 187-224 17-58 (221)
172 PF07819 PGAP1: PGAP1-like pro 28.2 1.1E+02 0.0024 25.2 4.5 13 108-120 4-16 (225)
173 PF02323 ELH: Egg-laying hormo 27.9 36 0.00078 27.8 1.4 21 7-27 11-31 (255)
174 COG2248 Predicted hydrolase (m 26.9 1.3E+02 0.0028 25.8 4.6 43 36-85 174-216 (304)
175 PRK13738 conjugal transfer pil 26.5 1.1E+02 0.0024 25.1 4.1 22 188-210 131-153 (209)
176 COG3855 Fbp Uncharacterized pr 26.2 1E+02 0.0022 28.7 4.1 48 62-120 182-229 (648)
177 COG5510 Predicted small secret 25.9 78 0.0017 19.0 2.3 20 1-20 2-22 (44)
178 PHA02973 hypothetical protein; 25.4 64 0.0014 23.2 2.2 16 4-19 3-18 (102)
179 COG5214 POL12 DNA polymerase a 25.2 4.4E+02 0.0095 24.3 7.8 100 20-121 287-397 (581)
180 PF02468 PsbN: Photosystem II 25.1 66 0.0014 19.3 1.9 10 18-27 26-35 (43)
181 PRK00753 psbL photosystem II r 24.5 86 0.0019 18.2 2.2 16 2-17 18-33 (39)
182 PRK14344 lipoate-protein ligas 24.4 2E+02 0.0043 23.9 5.3 36 188-224 34-70 (223)
183 TIGR01495 ETRAMP Plasmodium ri 24.4 86 0.0019 21.8 2.7 23 1-23 1-23 (85)
184 PRK15453 phosphoribulokinase; 22.5 2.4E+02 0.0053 24.5 5.6 43 37-83 4-46 (290)
185 CHL00038 psbL photosystem II p 22.2 1E+02 0.0022 17.8 2.2 15 2-16 17-31 (38)
186 PF00676 E1_dh: Dehydrogenase 21.7 69 0.0015 27.8 2.2 75 35-118 121-196 (300)
187 PF02238 COX7a: Cytochrome c o 21.4 1.1E+02 0.0023 19.6 2.4 17 3-19 29-45 (56)
188 PTZ00459 mucin-associated surf 21.4 54 0.0012 28.4 1.5 6 12-17 12-17 (291)
189 KOG0156 Cytochrome P450 CYP2 s 21.2 1.3E+02 0.0028 28.1 4.0 46 29-80 25-70 (489)
190 COG2875 CobM Precorrin-4 methy 21.2 1.6E+02 0.0035 24.8 4.0 54 56-120 62-115 (254)
191 PRK14346 lipoate-protein ligas 21.0 2.4E+02 0.0052 23.6 5.1 34 188-223 18-51 (230)
192 PF01470 Peptidase_C15: Pyrogl 20.5 93 0.002 25.2 2.6 24 57-80 47-70 (202)
193 COG4704 Uncharacterized protei 20.3 2.1E+02 0.0045 21.9 4.1 45 5-49 8-56 (151)
194 TIGR01732 tiny_TM_bacill conse 20.1 92 0.002 16.5 1.6 9 5-13 11-19 (26)
195 TIGR02743 TraW type-F conjugat 20.1 1.6E+02 0.0034 24.1 3.8 14 188-202 133-146 (202)
196 PF15240 Pro-rich: Proline-ric 20.0 1E+02 0.0022 24.7 2.6 27 5-31 2-28 (179)
No 1
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-47 Score=311.13 Aligned_cols=220 Identities=67% Similarity=1.096 Sum_probs=205.1
Q ss_pred hcccCCCCCCccCCCCCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHh
Q 026017 19 FCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESF 98 (244)
Q Consensus 19 ~~~~~~~~~~~~~p~~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~ 98 (244)
.++|+.+++++..|++.++.++|+++||||..|.++|.+++..|.+|+++.+.|||+.+||++|++|..+..|++|++.|
T Consensus 24 ~~~s~~eLp~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF 103 (336)
T KOG2679|consen 24 AISSTAELPRLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSF 103 (336)
T ss_pred ccchhhhhhhhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhh
Confidence 78899999999999999999999999999988899999999999999998999999999999999999999999999999
Q ss_pred hhhccCCCCCCceEEecCCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCC
Q 026017 99 VNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWS 178 (244)
Q Consensus 99 ~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~ 178 (244)
+.+|+.+.|++|||.+.||||+.++.++|+.+.+++.++||.+|+.|..+...+.+.++|+..+..+|..-+.++-++|+
T Consensus 104 ~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~ 183 (336)
T KOG2679|consen 104 ENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWR 183 (336)
T ss_pred hhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccHHhhcceeeeeeccccccchhhheecccccccccc
Confidence 99999999999999999999999999999988788889999999988777777889999998887766666655678999
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccCCCCCChHhHHHHHHHHHHHHH
Q 026017 179 GIQPRKSYLANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQVIY 239 (244)
Q Consensus 179 ~~~~~~~~~~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~~g~~~~l~~~l~Pll~~~~ 239 (244)
+..|+..+...++. ||+..|+++.++|+||++|||+.|.+.||++.+|.++|+|||+++.
T Consensus 184 ~v~PR~~~~~~~l~-~le~~L~~S~a~wkiVvGHh~i~S~~~HG~T~eL~~~LlPiL~~n~ 243 (336)
T KOG2679|consen 184 GVLPRVKYLRALLS-WLEVALKASRAKWKIVVGHHPIKSAGHHGPTKELEKQLLPILEANG 243 (336)
T ss_pred cCChHHHHHHHHHH-HHHHHHHHhhcceEEEecccceehhhccCChHHHHHHHHHHHHhcC
Confidence 88899888899999 9999999999999999999999999999999999999999999874
No 2
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=1.4e-36 Score=266.77 Aligned_cols=189 Identities=28% Similarity=0.492 Sum_probs=155.9
Q ss_pred CCCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCC--CCCc
Q 026017 33 AKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPS--LAKQ 110 (244)
Q Consensus 33 ~~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~--l~iP 110 (244)
...+..++|+++||+| .|.++|..|+++|.+++++.++|||+.+||++ .+|+.+.+|++|++.|+++|..+. +++|
T Consensus 21 ~~~~~~l~F~~vGDwG-~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~P 98 (394)
T PTZ00422 21 YSVKAQLRFASLGNWG-TGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIP 98 (394)
T ss_pred cccCCeEEEEEEecCC-CCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCC
Confidence 3456788999999999 58889999999999999988999999999999 899999899999999999998776 8999
Q ss_pred eEEecCCCCCCCCccccccccc--------------c---CCCCceeeee-eEEE----c-------------CceEEEE
Q 026017 111 WYNVLGNHDYRGDVEAQLSPVL--------------R---DIDSRWLCLR-SFIV----N-------------AEIAEFI 155 (244)
Q Consensus 111 ~~~v~GNHD~~~~~~~~~~~~~--------------~---~~~~~~~~p~-~Ysf----~-------------~~~~~fi 155 (244)
||+|+||||+.++..+|+.+.. . ..++||.||. +|.+ . ...+.|+
T Consensus 99 wy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fi 178 (394)
T PTZ00422 99 FFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAFI 178 (394)
T ss_pred eEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEEE
Confidence 9999999999999888875311 1 1258999995 4533 1 1348999
Q ss_pred EEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhh--CCCCEEEEEcCcccccCCCCCChHhHHHHHHH
Q 026017 156 FVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKE--STAKWKIVVGHHTIKSSGHHGNTHELNLQLLP 233 (244)
Q Consensus 156 ~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~--~~~~~~iv~~H~P~~~~~~~g~~~~l~~~l~P 233 (244)
+|||..+...| ..+ ...++|++ ||+++|+. +.++|+||++|||+||.+.|+++.+|++.|+|
T Consensus 179 fiDT~~l~~~~-~~~--------------~~~~~~w~-~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~P 242 (394)
T PTZ00422 179 FIDTWILSSSF-PYK--------------KVSERAWQ-DLKATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYLSYYLLP 242 (394)
T ss_pred EEECchhcccC-Ccc--------------ccCHHHHH-HHHHHHHhhccCCCeEEEEecCceeecCCCCCCHHHHHHHHH
Confidence 99998875421 111 01246888 99999964 35789999999999999999988899999999
Q ss_pred HHHHHH
Q 026017 234 ILQVIY 239 (244)
Q Consensus 234 ll~~~~ 239 (244)
||++|.
T Consensus 243 LL~ky~ 248 (394)
T PTZ00422 243 LLKDAQ 248 (394)
T ss_pred HHHHcC
Confidence 999985
No 3
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.97 E-value=1.6e-30 Score=222.67 Aligned_cols=196 Identities=44% Similarity=0.692 Sum_probs=144.7
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
++|+++||+|..+...|.+++++|.+++++.+|||||++||++|++|.....+.+|.+.|+.++....+++|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 48999999995446678889999998877689999999999999998765445667666766554223689999999999
Q ss_pred CCCCCccccccccccCCCCceeee-eeEEEcCc------eEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHH
Q 026017 119 DYRGDVEAQLSPVLRDIDSRWLCL-RSFIVNAE------IAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLL 191 (244)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~~~~p-~~Ysf~~~------~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql 191 (244)
|+..+..++..+.......+|.+| .+|+|+.+ +++||+|||+.+...+...+. ..++ ....+.++|+
T Consensus 81 D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~--~~~~----~~~~~~~~Q~ 154 (277)
T cd07378 81 DYSGNVSAQIDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIAS--PYGP----PNGKLAEEQL 154 (277)
T ss_pred ccCCCchheeehhccCCCCCccCcchheEEEeecCCCCCEEEEEEEeChhHcCccccccc--cccC----cchhhHHHHH
Confidence 998765544432111124566666 46788776 899999999987543211100 0011 1234568999
Q ss_pred HHHHHHHHhhCCCCEEEEEcCcccccCCCCCChHhHHHHHHHHHHHHHhh
Q 026017 192 KQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQVIYYL 241 (244)
Q Consensus 192 ~~WL~~~L~~~~~~~~iv~~H~P~~~~~~~g~~~~l~~~l~Pll~~~~~~ 241 (244)
+ ||+++|++++.+|+||++|||+++.+.++.....++.|.++++++...
T Consensus 155 ~-wL~~~L~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~l~~~~~v~ 203 (277)
T cd07378 155 A-WLEKTLAASTADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKKYKVD 203 (277)
T ss_pred H-HHHHHHHhcCCCeEEEEeCccceeCCCCCCcHHHHHHHHHHHHHcCCC
Confidence 9 999999988779999999999998877666567889999999998643
No 4
>PLN02533 probable purple acid phosphatase
Probab=99.94 E-value=1.2e-26 Score=209.34 Aligned_cols=191 Identities=17% Similarity=0.210 Sum_probs=129.5
Q ss_pred hhcccCCCCCCccCCCCCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHH
Q 026017 18 VFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFES 97 (244)
Q Consensus 18 ~~~~~~~~~~~~~~p~~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~ 97 (244)
|+..++.+...|++||. ..+++|+++||.|. ..... +.++.+.+ .+||||+++||++|+++. ...|.+.
T Consensus 120 vg~~~~s~~~~F~T~p~-~~~~~f~v~GDlG~-~~~~~----~tl~~i~~-~~pD~vl~~GDl~y~~~~----~~~wd~f 188 (427)
T PLN02533 120 CGGPSSTQEFSFRTPPS-KFPIKFAVSGDLGT-SEWTK----STLEHVSK-WDYDVFILPGDLSYANFY----QPLWDTF 188 (427)
T ss_pred ECCCCCccceEEECCCC-CCCeEEEEEEeCCC-CcccH----HHHHHHHh-cCCCEEEEcCccccccch----HHHHHHH
Confidence 44445566778999875 57899999999874 22222 34455554 699999999999986532 2345554
Q ss_pred hhhhccCCCCCCceEEecCCCCCCCCccccccccccCCCCceeee---------eeEEEcCceEEEEEEeCccccccccc
Q 026017 98 FVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCL---------RSFIVNAEIAEFIFVDTTPFVNKYFT 168 (244)
Q Consensus 98 ~~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p---------~~Ysf~~~~~~fi~LDs~~~~~~~~~ 168 (244)
++.+..+ ...+|+++++||||........- ..+.....+|.+| .+|+|++|++|||+|||....
T Consensus 189 ~~~i~~l-~s~~P~m~~~GNHE~~~~~~~~~-~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~----- 261 (427)
T PLN02533 189 GRLVQPL-ASQRPWMVTHGNHELEKIPILHP-EKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDF----- 261 (427)
T ss_pred HHHhhhH-hhcCceEEeCccccccccccccC-cCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCccc-----
Confidence 3332211 23699999999999875321000 0011223556555 479999999999999996411
Q ss_pred CCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhhC---CCCEEEEEcCcccccCCC-CCC---hHhHHHHHHHHHHHHHhh
Q 026017 169 DPEDHVYDWSGIQPRKSYLANLLKQDVDSALKES---TAKWKIVVGHHTIKSSGH-HGN---THELNLQLLPILQVIYYL 241 (244)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~---~~~~~iv~~H~P~~~~~~-~g~---~~~l~~~l~Pll~~~~~~ 241 (244)
. ...+|++ ||+++|++. +.+|+||++|+|+|+.+. +.+ ...+++.|+|||.+|..=
T Consensus 262 ~----------------~~~~Q~~-WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~Vd 324 (427)
T PLN02533 262 E----------------PGSEQYQ-WLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVD 324 (427)
T ss_pred c----------------CchHHHH-HHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCc
Confidence 0 0158999 999999863 458999999999998753 432 245788999999998654
Q ss_pred hc
Q 026017 242 II 243 (244)
Q Consensus 242 ~~ 243 (244)
++
T Consensus 325 lv 326 (427)
T PLN02533 325 LV 326 (427)
T ss_pred EE
Confidence 33
No 5
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=99.93 E-value=2.7e-25 Score=191.79 Aligned_cols=182 Identities=15% Similarity=0.167 Sum_probs=118.8
Q ss_pred CCCeEEEEEecCCCCCCCChHHHHHHHHHHHh-hcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEe
Q 026017 36 DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGE-KLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNV 114 (244)
Q Consensus 36 ~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~-~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v 114 (244)
..++||+++||+|..+...+ ++++++++ ..+||||+++||++|+.|... ..+|...++.+..+ ...+|++++
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~----~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~--~~~~~~~~~~~~~~-~~~~P~~~~ 74 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNST----NTLDHLEKELGNYDAILHVGDLAYADGYNN--GSRWDTFMRQIEPL-ASYVPYMVT 74 (294)
T ss_pred CCcEEEEEEEECCCCCCCcH----HHHHHHHhccCCccEEEEcCchhhhcCCcc--chhHHHHHHHHHHH-HhcCCcEEc
Confidence 46899999999985222222 33444433 368999999999998776432 13344333222111 126999999
Q ss_pred cCCCCCCCCccccccccc------cCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHH
Q 026017 115 LGNHDYRGDVEAQLSPVL------RDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLA 188 (244)
Q Consensus 115 ~GNHD~~~~~~~~~~~~~------~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (244)
+||||............. .........+.+|+|++++++||+|||..... . + ....
T Consensus 75 ~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~-----~--------~-----~~~~ 136 (294)
T cd00839 75 PGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFY-----G--------D-----GPGS 136 (294)
T ss_pred CcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccc-----c--------C-----CCCc
Confidence 999998765332211000 00001111235799999999999999976421 0 0 0125
Q ss_pred HHHHHHHHHHHhhCC---CCEEEEEcCcccccCCCCCC----hHhHHHHHHHHHHHHHhhhc
Q 026017 189 NLLKQDVDSALKEST---AKWKIVVGHHTIKSSGHHGN----THELNLQLLPILQVIYYLII 243 (244)
Q Consensus 189 ~Ql~~WL~~~L~~~~---~~~~iv~~H~P~~~~~~~g~----~~~l~~~l~Pll~~~~~~~~ 243 (244)
+|++ ||+++|++.. .+|+||++|+|+++.+.+.. ....++.|.+||++|..-++
T Consensus 137 ~q~~-WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~v 197 (294)
T cd00839 137 PQYD-WLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLV 197 (294)
T ss_pred HHHH-HHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEE
Confidence 8999 9999998753 37999999999998875443 35778999999999965443
No 6
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=99.92 E-value=9.2e-25 Score=192.79 Aligned_cols=194 Identities=19% Similarity=0.229 Sum_probs=136.8
Q ss_pred hhcccC-CCCCCccCCCCCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHH
Q 026017 18 VFCPSS-AELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFE 96 (244)
Q Consensus 18 ~~~~~~-~~~~~~~~p~~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~ 96 (244)
|+++++ ++.-.|++||....+.+|+++||.|. ... +.. .+..+.+..++|+|++.||+.|+++... ++|.+
T Consensus 126 ~Gs~~~wS~~f~F~t~p~~~~~~~~~i~GDlG~-~~~-~~s---~~~~~~~~~k~d~vlhiGDlsYa~~~~n---~~wD~ 197 (452)
T KOG1378|consen 126 VGSDLKWSEIFSFKTPPGQDSPTRAAIFGDMGC-TEP-YTS---TLRNQEENLKPDAVLHIGDLSYAMGYSN---WQWDE 197 (452)
T ss_pred eCCCCCcccceEeECCCCccCceeEEEEccccc-ccc-ccc---hHhHHhcccCCcEEEEecchhhcCCCCc---cchHH
Confidence 555555 56667898886778999999999884 221 211 1222223347999999999999987542 45655
Q ss_pred HhhhhccCCCCCCceEEecCCCCCCCCccccccccccCCCCceeee---------eeEEEcCceEEEEEEeCcccccccc
Q 026017 97 SFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCL---------RSFIVNAEIAEFIFVDTTPFVNKYF 167 (244)
Q Consensus 97 ~~~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p---------~~Ysf~~~~~~fi~LDs~~~~~~~~ 167 (244)
..+.+-. -...+|++++.||||....... . +.....||.+| .+|||+.|.+|||+|+|..+.+
T Consensus 198 f~r~vEp-~As~vPymv~~GNHE~d~~~~~--~--F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~--- 269 (452)
T KOG1378|consen 198 FGRQVEP-IASYVPYMVCSGNHEIDWPPQP--C--FVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYN--- 269 (452)
T ss_pred HHhhhhh-hhccCceEEecccccccCCCcc--c--ccccceeeccCCCcCCCCCceeEEEeeccEEEEEEecccccc---
Confidence 4443322 1347999999999998865322 1 22334567666 4899999999999999987530
Q ss_pred cCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhhC--C-CCEEEEEcCcccccCCC--C---CChHhHHHHHHHHHHHHH
Q 026017 168 TDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKES--T-AKWKIVVGHHTIKSSGH--H---GNTHELNLQLLPILQVIY 239 (244)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~--~-~~~~iv~~H~P~~~~~~--~---g~~~~l~~~l~Pll~~~~ 239 (244)
.. ...+|.+ ||+++|++. + .+|+||++|.|+|++.. | |.....+..|+|||-+|+
T Consensus 270 ------------~~----~~~~QY~-WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~ 332 (452)
T KOG1378|consen 270 ------------FL----KGTAQYQ-WLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYK 332 (452)
T ss_pred ------------cc----ccchHHH-HHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhc
Confidence 00 0148999 999999874 2 69999999999999876 5 333466789999999997
Q ss_pred hhhcC
Q 026017 240 YLIIF 244 (244)
Q Consensus 240 ~~~~~ 244 (244)
.=++|
T Consensus 333 VDvvf 337 (452)
T KOG1378|consen 333 VDVVF 337 (452)
T ss_pred eeEEE
Confidence 65544
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.89 E-value=1.9e-22 Score=171.54 Aligned_cols=182 Identities=15% Similarity=0.129 Sum_probs=113.9
Q ss_pred CCCeEEEEEecCCCCCCC--C--------hH---HHHHHHHHHHhh-cCCCEEEEcCCcccCCCCCCcc-hhhhHHHhhh
Q 026017 36 DGSLSFLVVGDWGRRGAY--N--------QT---KVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVD-DAAFFESFVN 100 (244)
Q Consensus 36 ~~~~~f~~igD~~~~~~~--~--------q~---~v~~~i~~i~~~-~~pdfvl~~GDlvy~~G~~~~~-~~~~~~~~~~ 100 (244)
.++++|+++||+|. +.. . .+ .+.++++.+++. .+||+|+++||++. .|..... ..++ +.+..
T Consensus 2 ~~~~~f~~~sD~h~-~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~-~~~~~~~~~~~~-~~~~~ 78 (262)
T cd07395 2 SGPFYFIQGADPQL-GLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVN-AMPGDELRERQV-SDLKD 78 (262)
T ss_pred CCCEEEEEecCCcc-chhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCC-CCcchhhHHHHH-HHHHH
Confidence 46899999999995 421 0 11 233444555542 38999999999994 4332111 1122 22333
Q ss_pred hccCCCCCCceEEecCCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCC
Q 026017 101 IYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGI 180 (244)
Q Consensus 101 ~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~ 180 (244)
.+..-..++|+++++||||.......+. +.... ..+++.+|+++.++++||+|||..+.. +. +.
T Consensus 79 ~~~~~~~~vp~~~i~GNHD~~~~~~~~~---~~~f~-~~~g~~~y~~~~~~~~~i~lds~~~~~-----~~-------~~ 142 (262)
T cd07395 79 VLSLLDPDIPLVCVCGNHDVGNTPTEES---IKDYR-DVFGDDYFSFWVGGVFFIVLNSQLFFD-----PS-------EV 142 (262)
T ss_pred HHhhccCCCcEEEeCCCCCCCCCCChhH---HHHHH-HHhCCcceEEEECCEEEEEeccccccC-----cc-------cc
Confidence 3221123699999999999864321110 11001 112356788999999999999986421 10 00
Q ss_pred CcchHHHHHHHHHHHHHHHhhC---CCCEEEEEcCcccccCCCCC-C-----hHhHHHHHHHHHHHHHh
Q 026017 181 QPRKSYLANLLKQDVDSALKES---TAKWKIVVGHHTIKSSGHHG-N-----THELNLQLLPILQVIYY 240 (244)
Q Consensus 181 ~~~~~~~~~Ql~~WL~~~L~~~---~~~~~iv~~H~P~~~~~~~g-~-----~~~l~~~l~Pll~~~~~ 240 (244)
..+..+|++ ||+++|+++ +.+++||++|+|++..+... + ....++.+.++|+++..
T Consensus 143 ---~~~~~~ql~-WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V 207 (262)
T cd07395 143 ---PELAQAQDV-WLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGV 207 (262)
T ss_pred ---ccchHHHHH-HHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCc
Confidence 123478999 999999875 56899999999998654321 1 23567889999999854
No 8
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.86 E-value=5.5e-21 Score=163.10 Aligned_cols=188 Identities=17% Similarity=0.152 Sum_probs=113.8
Q ss_pred eEEEEEecCCCCCCC----C-----hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCC
Q 026017 39 LSFLVVGDWGRRGAY----N-----QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAK 109 (244)
Q Consensus 39 ~~f~~igD~~~~~~~----~-----q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~i 109 (244)
|||+++||+|..... . -..+.++++.+++ .+||+|+++||++. .|... .++.|.... +. +..+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~-~~~d~vv~~GDlv~-~~~~~-~~~~~~~~~-~~--l~~l~~ 74 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNR-ESLDFVVQLGDIID-GDNAR-AEEALDAVL-AI--LDRLKG 74 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHc-CCCCEEEECCCeec-CCCch-HHHHHHHHH-HH--HHhcCC
Confidence 689999999942211 0 1345566777766 57999999999993 44321 123343322 22 235679
Q ss_pred ceEEecCCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCC----------------
Q 026017 110 QWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDH---------------- 173 (244)
Q Consensus 110 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~---------------- 173 (244)
|+++++||||........... .......+.+|+|+.++++||+|||...... +.+...
T Consensus 75 p~~~v~GNHD~~~~~~~~~~~----~~~~~~~~~yysf~~~~~~~i~lds~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 148 (267)
T cd07396 75 PVHHVLGNHDLYNPSREYLLL----YTLLGLGAPYYSFSPGGIRFIVLDGYDISAL--GRPEDTPKAENADDNSNLGLYL 148 (267)
T ss_pred CEEEecCccccccccHhhhhc----ccccCCCCceEEEecCCcEEEEEeCCccccc--cCCCCChhhhhHHHhchhhhhc
Confidence 999999999987543222210 0111123457899999999999999653210 000000
Q ss_pred -cCCCCCCCcchHHHHHHHHHHHHHHHhhC--CCCEEEEEcCcccccCCCC-CChHhHHHHHHHHHHHHHhh
Q 026017 174 -VYDWSGIQPRKSYLANLLKQDVDSALKES--TAKWKIVVGHHTIKSSGHH-GNTHELNLQLLPILQVIYYL 241 (244)
Q Consensus 174 -~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~--~~~~~iv~~H~P~~~~~~~-g~~~~l~~~l~Pll~~~~~~ 241 (244)
...|. ...+.+.++|++ ||+++|++. +.+++||++|||++..+.. .....-.+.+.+++++|+++
T Consensus 149 ~~~~~~--~~~G~l~~~Ql~-WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~~~~~~~~~~~~~~ll~~~~~V 217 (267)
T cd07396 149 SEPRFV--DWNGGIGEEQLQ-WLRNELQEADANGEKVIIFSHFPLHPESTSPHGLLWNHEEVLSILRAYGCV 217 (267)
T ss_pred cCccce--eccCcCCHHHHH-HHHHHHHHHHhcCCeEEEEEeccCCCCCCCccccccCHHHHHHHHHhCCCE
Confidence 00000 001123479999 999999864 4578999999999876531 11112357788999997654
No 9
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.83 E-value=4.1e-20 Score=158.37 Aligned_cols=180 Identities=17% Similarity=0.200 Sum_probs=111.6
Q ss_pred ccCCCCCCCCeEEEEEecCCCCCCC--------ChHHHHHHHHHHHhh-cCCCEEEEcCCcccCCCCCCcchhhhHHHhh
Q 026017 29 FEHPAKPDGSLSFLVVGDWGRRGAY--------NQTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFV 99 (244)
Q Consensus 29 ~~~p~~~~~~~~f~~igD~~~~~~~--------~q~~v~~~i~~i~~~-~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~ 99 (244)
++++..+..+++|++++|+|..... ....+.++++.+++. .+|||||++||++ ++|. .+++....+
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~-~~~~----~~~~~~~~~ 79 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLA-QDHS----SEAYQHFAE 79 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCC-CCCC----HHHHHHHHH
Confidence 5666667788999999999953211 113455666766553 4799999999999 3432 123332222
Q ss_pred hhccCCCCCCceEEecCCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCC
Q 026017 100 NIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSG 179 (244)
Q Consensus 100 ~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~ 179 (244)
. +..+++|+++++||||........+. . ..+ .+.++.+..++++||+|||..... +
T Consensus 80 ~---l~~l~~Pv~~v~GNHD~~~~~~~~~~----~--~~~-~~~~~~~~~~~~~~i~Lds~~~g~-----~--------- 135 (275)
T PRK11148 80 G---IAPLRKPCVWLPGNHDFQPAMYSALQ----D--AGI-SPAKHVLIGEHWQILLLDSQVFGV-----P--------- 135 (275)
T ss_pred H---HhhcCCcEEEeCCCCCChHHHHHHHh----h--cCC-CccceEEecCCEEEEEecCCCCCC-----c---------
Confidence 2 23568999999999998543222111 0 011 122233445679999999975321 1
Q ss_pred CCcchHHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccCCC-CCCh--HhHHHHHHHHHHHHHhh
Q 026017 180 IQPRKSYLANLLKQDVDSALKESTAKWKIVVGHHTIKSSGH-HGNT--HELNLQLLPILQVIYYL 241 (244)
Q Consensus 180 ~~~~~~~~~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~-~g~~--~~l~~~l~Pll~~~~~~ 241 (244)
.+.+.++|++ ||+++|++.+.++++|++|||++..+. ..+. ..-.+.+..++++|+.+
T Consensus 136 ---~G~l~~~ql~-wL~~~L~~~~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v 196 (275)
T PRK11148 136 ---HGELSEYQLE-WLERKLADAPERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNV 196 (275)
T ss_pred ---CCEeCHHHHH-HHHHHHhhCCCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCc
Confidence 1123368999 999999987777777878776654432 1111 12246788888888543
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.82 E-value=1.2e-19 Score=152.09 Aligned_cols=169 Identities=18% Similarity=0.178 Sum_probs=108.1
Q ss_pred EEEEEecCCCCCCC-------C-hHHHHHHHHHHHhh-cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCc
Q 026017 40 SFLVVGDWGRRGAY-------N-QTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQ 110 (244)
Q Consensus 40 ~f~~igD~~~~~~~-------~-q~~v~~~i~~i~~~-~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP 110 (244)
||+++||+|..... + ...+.+.++.+++. .+||+|+++||++. .|. ..++.. +.+. +..+++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~-~~~----~~~~~~-~~~~--l~~~~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTD-DGS----PESYER-LREL--LAALPIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCC-CCC----HHHHHH-HHHH--HhhcCCC
Confidence 69999999953221 1 23455556666553 38999999999994 332 122322 2222 2345899
Q ss_pred eEEecCCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHH
Q 026017 111 WYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANL 190 (244)
Q Consensus 111 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q 190 (244)
++.++||||........ +.... .-..+.+|+|+.++++||+|||..... . . +.+.++|
T Consensus 73 ~~~v~GNHD~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~i~lds~~~~~-----~----~--------~~~~~~q 130 (240)
T cd07402 73 VYLLPGNHDDRAAMRAV----FPELP-PAPGFVQYVVDLGGWRLILLDSSVPGQ-----H----G--------GELCAAQ 130 (240)
T ss_pred EEEeCCCCCCHHHHHHh----hcccc-ccccccceeEecCCEEEEEEeCCCCCC-----c----C--------CEECHHH
Confidence 99999999985432211 11100 012245688999999999999975311 0 0 0123689
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCcccccCCC-CCCh--HhHHHHHHHHHHHHH
Q 026017 191 LKQDVDSALKESTAKWKIVVGHHTIKSSGH-HGNT--HELNLQLLPILQVIY 239 (244)
Q Consensus 191 l~~WL~~~L~~~~~~~~iv~~H~P~~~~~~-~g~~--~~l~~~l~Pll~~~~ 239 (244)
++ ||++.|++...+++|+++|||++..+. ..+. ..-.+.+.+++.+++
T Consensus 131 l~-wL~~~L~~~~~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~ 181 (240)
T cd07402 131 LD-WLEAALAEAPDKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHP 181 (240)
T ss_pred HH-HHHHHHHhCCCCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCC
Confidence 99 999999987778999999999987542 1111 123677888998883
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.81 E-value=3.5e-19 Score=151.07 Aligned_cols=181 Identities=18% Similarity=0.240 Sum_probs=104.2
Q ss_pred EEEEecCCCCCCCChHH---H-HHHHHHHHhhcCCCEEEEcCCcccCCCCCC-----cchhhhHHHhhhhccCCCC-CCc
Q 026017 41 FLVVGDWGRRGAYNQTK---V-AHQMGIVGEKLKIDFIISTGDNFYDDGLTG-----VDDAAFFESFVNIYTAPSL-AKQ 110 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~---v-~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~-----~~~~~~~~~~~~~~~~~~l-~iP 110 (244)
|++++|+|. |...... . ..+++.+++ .+||+++++||++ +++... ....+|.+.++.+.....+ ++|
T Consensus 2 ~~~iSDlH~-g~~~~~~~~~~~~~~~~~i~~-~~pd~i~~~GD~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 78 (256)
T cd07401 2 FVHISDIHV-SSFHPPNRAQDETFCSNFIDV-IKPALVLATGDLT-DNKTGNKLPSYQYQEEWQKYYNILKESSVINKEK 78 (256)
T ss_pred EEEeccccc-CCcCchhhhhHHHHHHHHHHh-hCCCEEEEccccc-cccccCCCcccccHHHHHHHHHHHHHhCCCCcce
Confidence 789999995 5442211 1 223334444 7999999999999 333211 1123343333322222233 599
Q ss_pred eEEecCCCCCCCCccc--cccccccCCCCceee-ee-eEE--EcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcch
Q 026017 111 WYNVLGNHDYRGDVEA--QLSPVLRDIDSRWLC-LR-SFI--VNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK 184 (244)
Q Consensus 111 ~~~v~GNHD~~~~~~~--~~~~~~~~~~~~~~~-p~-~Ys--f~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (244)
++.++||||..+.... ...+ +.+. .++.+ +. +|. +..++++||+|||..+... ..+ +.+ .+
T Consensus 79 ~~~v~GNHD~~~~~~~~~~~~~-~~~y-~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~--~~~----~~~-----~g 145 (256)
T cd07401 79 WFDIRGNHDLFNIPSLDSENNY-YRKY-SATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGP--KRP----FNF-----FG 145 (256)
T ss_pred EEEeCCCCCcCCCCCccchhhH-HHHh-heecCCCccceEEEecCCCEEEEEEcCccCCCC--CCC----Cce-----ec
Confidence 9999999999653221 1111 1111 12222 21 222 3358999999999864210 000 111 11
Q ss_pred HHHHHHHHHHHHHHHhhC-CCCEEEEEcCcccccCCCCCChHhHHHHHHHHHHHHHh
Q 026017 185 SYLANLLKQDVDSALKES-TAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQVIYY 240 (244)
Q Consensus 185 ~~~~~Ql~~WL~~~L~~~-~~~~~iv~~H~P~~~~~~~g~~~~l~~~l~Pll~~~~~ 240 (244)
.+.++|++ ||+++|++. +.+++||++|||+......... ...+ +.++|+++..
T Consensus 146 ~l~~~ql~-wL~~~L~~~~~~~~~IV~~HhP~~~~~~~~~~-~~~~-~~~ll~~~~v 199 (256)
T cd07401 146 SLDKKLLD-RLEKELEKSTNSNYTIWFGHYPTSTIISPSAK-SSSK-FKDLLKKYNV 199 (256)
T ss_pred cCCHHHHH-HHHHHHHhcccCCeEEEEEcccchhccCCCcc-hhHH-HHHHHHhcCC
Confidence 23479999 999999875 5689999999999764432221 2223 8899999864
No 12
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.76 E-value=5.6e-18 Score=140.00 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=90.1
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHH---HhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEec
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIV---GEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVL 115 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i---~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~ 115 (244)
+||+++||+|.........+.+.++.+ +++.+||+|+++||++. .+.. ..+|....+.+..+...++|+++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~-~~~~---~~~~~~~~~~~~~l~~~~~p~~~~~ 76 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVD-DGDN---DAEWEAADKAFARLDKAGIPYSVLA 76 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccC-CCCC---HHHHHHHHHHHHHHHHcCCcEEEEC
Confidence 689999999952222223333333333 22368999999999993 4321 2344433322222222469999999
Q ss_pred CCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHH
Q 026017 116 GNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDV 195 (244)
Q Consensus 116 GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL 195 (244)
||||. ++.+|+.. .++|++ ||
T Consensus 77 GNHD~---------------------------------~~~ld~~~-------------------------~~~ql~-WL 97 (214)
T cd07399 77 GNHDL---------------------------------VLALEFGP-------------------------RDEVLQ-WA 97 (214)
T ss_pred CCCcc---------------------------------hhhCCCCC-------------------------CHHHHH-HH
Confidence 99991 22233321 147899 99
Q ss_pred HHHHhhCCCCEEEEEcCcccccCCCCCCh-------HhHHHHHHHHHHHHHhh
Q 026017 196 DSALKESTAKWKIVVGHHTIKSSGHHGNT-------HELNLQLLPILQVIYYL 241 (244)
Q Consensus 196 ~~~L~~~~~~~~iv~~H~P~~~~~~~g~~-------~~l~~~l~Pll~~~~~~ 241 (244)
+++|++.+.+++||++|||++..+...+. ..-.+.|..|+++|+++
T Consensus 98 ~~~L~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V 150 (214)
T cd07399 98 NEVLKKHPDRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNV 150 (214)
T ss_pred HHHHHHCCCCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCE
Confidence 99999887889999999999876543221 23456788999998655
No 13
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.73 E-value=5.6e-17 Score=140.29 Aligned_cols=174 Identities=17% Similarity=0.129 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHhh-cCCCEEEEcCCcccCCCCCCcchh-h----hHHHhhhhccCCCCCCceEEecCCCCCCCCccccc
Q 026017 55 QTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDA-A----FFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQL 128 (244)
Q Consensus 55 q~~v~~~i~~i~~~-~~pdfvl~~GDlvy~~G~~~~~~~-~----~~~~~~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~ 128 (244)
...+..+++.+++. .+|||||++||++. .+....... . +...+..+.. ...++|+++++||||.........
T Consensus 52 ~~l~~s~l~~i~~~~~~~dfii~tGD~v~-h~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~pv~~~~GNHD~~p~~~~~~ 129 (296)
T cd00842 52 WRLVESALEAIKKNHPKPDFILWTGDLVR-HDVDEQTPETLVLISISNLTSLLKK-AFPDTPVYPALGNHDSYPVNQFPP 129 (296)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCCCC-CCchhhchhHHHHHHHHHHHHHHHH-hCCCCCEEEcCCCCCCCcccccCC
Confidence 35566777777663 48999999999994 333211100 0 1111111111 123699999999999864311000
Q ss_pred ----cccccCCCCce------------eeeeeEEEc-CceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHH
Q 026017 129 ----SPVLRDIDSRW------------LCLRSFIVN-AEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLL 191 (244)
Q Consensus 129 ----~~~~~~~~~~~------------~~p~~Ysf~-~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql 191 (244)
...+......| ....+|++. .+++++|+|||..+... ..|.. ........+|+
T Consensus 130 ~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~---------~~~~~-~~~~~~~~~Ql 199 (296)
T cd00842 130 NNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKK---------NFWLL-GSNETDPAGQL 199 (296)
T ss_pred cccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCcccccc---------Chhhh-ccCCCCHHHHH
Confidence 00000001111 112577777 89999999999976321 00100 00001126899
Q ss_pred HHHHHHHHhhC--CCCEEEEEcCcccccCCCCCChHhHHHHHHHHHHHHHhhh
Q 026017 192 KQDVDSALKES--TAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQVIYYLI 242 (244)
Q Consensus 192 ~~WL~~~L~~~--~~~~~iv~~H~P~~~~~~~g~~~~l~~~l~Pll~~~~~~~ 242 (244)
+ ||+++|+++ +.+.++|++|+|+........ ....+.+..|+++|..+|
T Consensus 200 ~-WL~~~L~~a~~~~~~v~I~~HiPp~~~~~~~~-~~~~~~~~~ii~~y~~~i 250 (296)
T cd00842 200 Q-WLEDELQEAEQAGEKVWIIGHIPPGVNSYDTL-ENWSERYLQIINRYSDTI 250 (296)
T ss_pred H-HHHHHHHHHHHCCCeEEEEeccCCCCcccccc-hHHHHHHHHHHHHHHHhh
Confidence 9 999999875 456789999999987543321 456789999999998755
No 14
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.71 E-value=2.6e-17 Score=139.42 Aligned_cols=136 Identities=21% Similarity=0.219 Sum_probs=87.8
Q ss_pred HHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhh---hhccCCCCCCceEEecCCCCCCCCccccccccccCCCCc
Q 026017 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFV---NIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSR 138 (244)
Q Consensus 62 i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~---~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 138 (244)
++.+.+..+||+|+++||++ +.|... .+.+|.+.++ +++......+|++.+|||||.+....... ..+ +...+
T Consensus 37 ~~~~~~~l~PD~vv~lGDL~-d~G~~~-~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~-~~~-~rf~~ 112 (257)
T cd08163 37 WRYMQKQLKPDSTIFLGDLF-DGGRDW-ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVL-PVR-QRFEK 112 (257)
T ss_pred HHHHHHhcCCCEEEEecccc-cCCeeC-cHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCH-HHH-HHHHH
Confidence 33444557999999999999 556532 3456755443 33321112489999999999864321100 001 11123
Q ss_pred eeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccc
Q 026017 139 WLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKES-TAKWKIVVGHHTIKS 217 (244)
Q Consensus 139 ~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~-~~~~~iv~~H~P~~~ 217 (244)
++++.+|+++.++++||+|||..+.+. . ...+.++|++ ||++.|+.. ..+++||++|+|+|.
T Consensus 113 ~Fg~~~~~~~~~~~~fV~Lds~~l~~~----~------------~~~~~~~~~~-~l~~~l~~~~~~~p~ILl~H~Plyr 175 (257)
T cd08163 113 YFGPTSRVIDVGNHTFVILDTISLSNK----D------------DPDVYQPPRE-FLHSFSAMKVKSKPRILLTHVPLYR 175 (257)
T ss_pred HhCCCceEEEECCEEEEEEccccccCC----c------------ccccchhHHH-HHHhhhhccCCCCcEEEEecccccc
Confidence 344557889999999999999865321 0 0112357888 999998764 567899999999986
Q ss_pred C
Q 026017 218 S 218 (244)
Q Consensus 218 ~ 218 (244)
.
T Consensus 176 ~ 176 (257)
T cd08163 176 P 176 (257)
T ss_pred C
Confidence 5
No 15
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.57 E-value=1.8e-14 Score=129.39 Aligned_cols=83 Identities=20% Similarity=0.154 Sum_probs=61.0
Q ss_pred eeEEEc-CceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccCCC-
Q 026017 143 RSFIVN-AEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKESTAKWKIVVGHHTIKSSGH- 220 (244)
Q Consensus 143 ~~Ysf~-~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~- 220 (244)
.||+|+ .++++||+|||....+. + .+.+.++|++ ||+++|++++.+++||++|||+++.+.
T Consensus 292 ~YYSFd~~ggvrfIvLDSt~~~G~-----------~-----~G~L~eeQL~-WLeqeLa~a~~k~VVVf~HHPp~s~g~~ 354 (496)
T TIGR03767 292 GYYTFDIAGGVRGISMDTTNRAGG-----------D-----EGSLGQTQFK-WIKDTLRASSDTLFVLFSHHTSWSMVNE 354 (496)
T ss_pred ceEEEEeECCEEEEEEeCCCcCCC-----------c-----CCccCHHHHH-HHHHHHhcCCCCCEEEEECCCCcccccc
Confidence 389999 89999999999853211 1 1123479999 999999988888999999999987542
Q ss_pred ----C--CChHhHHHHHHHHHHHHHhhh
Q 026017 221 ----H--GNTHELNLQLLPILQVIYYLI 242 (244)
Q Consensus 221 ----~--g~~~~l~~~l~Pll~~~~~~~ 242 (244)
+ +......+.|..+|++|+++.
T Consensus 355 ~~Dp~~pg~~~~n~~eLldLL~~ypnV~ 382 (496)
T TIGR03767 355 LTDPVDPGEKRHLGTELVSLLLEHPNVL 382 (496)
T ss_pred ccccccccccccCHHHHHHHHhcCCCce
Confidence 1 111123467899999986654
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.56 E-value=5.9e-15 Score=114.84 Aligned_cols=187 Identities=16% Similarity=0.090 Sum_probs=90.4
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
+||+++||+|.. ..........+.......++|+||++||+++.. .. ...+..............+|+++++|||
T Consensus 1 ~ri~~isD~H~~-~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGG-YDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGG-NP---SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTT-HHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSS-SH---HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCC-CcchhHHHHHHHHHhccCCCCEEEeeccccccc-cc---cccchhhhccchhhhhcccccccccccc
Confidence 699999999962 110000233344444457999999999999533 21 1111111100011123479999999999
Q ss_pred CCCCCccccccccccCCCCceeeeeeEEEcC-ceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHH
Q 026017 119 DYRGDVEAQLSPVLRDIDSRWLCLRSFIVNA-EIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDS 197 (244)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~-~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~ 197 (244)
|+............. .........+.... ... ............ ... .. ..........++. |+..
T Consensus 76 D~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~----~~---~~~~~~~~~~~~~-~~~~ 142 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQ--FEDYYGNYNYYYSYFNNK-VIFDNDNFWFNS--GNN----EY---PDYGMEAQQEWWL-WLLL 142 (200)
T ss_dssp SSHHHHHHHHHHHHH--HSSEEECSSEEECTESSE-EEEEETTEEEEE--HCC----HT---HHSEHHHHHHHHH-HHHH
T ss_pred ccceecccccccccc--ccccccccccccccCcce-eeeccccccccc--ccc----cc---cccccccchhccc-cccc
Confidence 987532111000000 00000111111111 111 111111111000 000 00 0001112234455 5555
Q ss_pred HHhhCCCCEEEEEcCcccccCCCCCCh----HhHHHHHHHHHHHHHhhhc
Q 026017 198 ALKESTAKWKIVVGHHTIKSSGHHGNT----HELNLQLLPILQVIYYLII 243 (244)
Q Consensus 198 ~L~~~~~~~~iv~~H~P~~~~~~~g~~----~~l~~~l~Pll~~~~~~~~ 243 (244)
.++....+++||++|+|+++....... ...++.+.+++.++..-++
T Consensus 143 ~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 192 (200)
T PF00149_consen 143 LLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLV 192 (200)
T ss_dssp HHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEE
T ss_pred ccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEE
Confidence 555567889999999999987665432 3567788888887765444
No 17
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.51 E-value=1.4e-13 Score=112.49 Aligned_cols=115 Identities=17% Similarity=0.186 Sum_probs=75.6
Q ss_pred CCeEEEEEecCCCCCCCC--------hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC
Q 026017 37 GSLSFLVVGDWGRRGAYN--------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (244)
Q Consensus 37 ~~~~f~~igD~~~~~~~~--------q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~ 108 (244)
+++||++++|+|. +... .....+.+.++.+..+||+||++||+++...........|.+.++.+ ...+
T Consensus 1 ~~~ki~~isDlH~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l---~~~~ 76 (199)
T cd07383 1 GKFKILQFADLHF-GEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPM---IDRK 76 (199)
T ss_pred CceEEEEEeeecc-cCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHH---HHcC
Confidence 3689999999995 3321 12344556655555799999999999964432110112333333322 2347
Q ss_pred CceEEecCCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHH
Q 026017 109 KQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLA 188 (244)
Q Consensus 109 iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (244)
+|+++++||||..+ | +.+
T Consensus 77 ~p~~~~~GNHD~~g----------------~----------------------------------------------l~~ 94 (199)
T cd07383 77 IPWAATFGNHDGYD----------------W----------------------------------------------IRP 94 (199)
T ss_pred CCEEEECccCCCCC----------------C----------------------------------------------CCH
Confidence 99999999999100 0 014
Q ss_pred HHHHHHHHHHHhhC-----CCCEEEEEcCcccccC
Q 026017 189 NLLKQDVDSALKES-----TAKWKIVVGHHTIKSS 218 (244)
Q Consensus 189 ~Ql~~WL~~~L~~~-----~~~~~iv~~H~P~~~~ 218 (244)
+|++ ||++++++. ..++.++++|||+...
T Consensus 95 ~ql~-wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~ 128 (199)
T cd07383 95 SQIE-WFKETSAALKKKYGKPIPSLAFFHIPLPEY 128 (199)
T ss_pred HHHH-HHHHHHHHHhhccCCCCcceEEEecChHHH
Confidence 7889 999999864 4578999999998653
No 18
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.48 E-value=7e-13 Score=111.35 Aligned_cols=161 Identities=16% Similarity=0.079 Sum_probs=88.1
Q ss_pred EEEEEecCCCCC-CCChHH-HHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCC
Q 026017 40 SFLVVGDWGRRG-AYNQTK-VAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (244)
Q Consensus 40 ~f~~igD~~~~~-~~~q~~-v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (244)
||++++|.|... ...... +.+.++.+.+ .++|+|+++||++ +... ...++ ++.+.. ...+|++.++||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~-~~~d~vv~~GDl~-~~~~---~~~~~---~~~l~~--~~~~pv~~v~GN 70 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKK-QKIDHLHIAGDIS-NDFQ---RSLPF---IEKLQE--LKGIKVTFNAGN 70 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHh-cCCCEEEECCccc-cchh---hHHHH---HHHHHH--hcCCcEEEECCC
Confidence 589999999521 122222 3334444444 6899999999999 3211 11222 222221 136899999999
Q ss_pred CCCCCCc-cccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCC-------------CcCCCCCCCcc
Q 026017 118 HDYRGDV-EAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPED-------------HVYDWSGIQPR 183 (244)
Q Consensus 118 HD~~~~~-~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~-------------~~~~~~~~~~~ 183 (244)
||+.... ..++...+ ...+.....+.+..++++|++++...- ..+...+.. ....+ + ...
T Consensus 71 HD~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~ig~~gw~d-~~~~~~~~~~~~~~~~~d~~~~~~~~~-~-~~~ 144 (239)
T TIGR03729 71 HDMLKDLTYEEIESND---SPLYLHNRFIDIPNTQWRIIGNNGWYD-YSFSNDKTSKEILRWKKSFWFDRRIKR-P-MSD 144 (239)
T ss_pred CCCCCCCCHHHHHhcc---chhhhcccccccCCCceEEEeecccee-cccccccCHHHHHHhhhcEEeecccCC-C-CCh
Confidence 9986221 11111000 011111122334457899999984221 000000000 00001 0 113
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCEEEEEcCccccc
Q 026017 184 KSYLANLLKQDVDSALKESTAKWKIVVGHHTIKS 217 (244)
Q Consensus 184 ~~~~~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~ 217 (244)
..+.++|++ ||++.|++...+.+||++|||+..
T Consensus 145 ~~~~~~~l~-~l~~~l~~~~~~~~ivvtH~pP~~ 177 (239)
T TIGR03729 145 PERTAIVLK-QLKKQLNQLDNKQVIFVTHFVPHR 177 (239)
T ss_pred HHHHHHHHH-HHHHHHHhcCCCCEEEEEcccchH
Confidence 456688999 999999987778899999999865
No 19
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.47 E-value=7.8e-13 Score=113.43 Aligned_cols=151 Identities=21% Similarity=0.209 Sum_probs=89.6
Q ss_pred eEEEEEecCCCCC--CC-ChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEec
Q 026017 39 LSFLVVGDWGRRG--AY-NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVL 115 (244)
Q Consensus 39 ~~f~~igD~~~~~--~~-~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~ 115 (244)
++++.++|+|. + .. ....+..+++.+.. .+||++|++||++ +.|.. .++... ..+.....+..|++++|
T Consensus 1 ~~i~~isD~H~-~~~~~~~~~~~~~~~~~i~~-~~~D~~v~tGDl~-~~~~~----~~~~~~-~~~l~~~~~~~~~~~vp 72 (301)
T COG1409 1 MRIAHISDLHL-GALGVDSEELLEALLAAIEQ-LKPDLLVVTGDLT-NDGEP----EEYRRL-KELLARLELPAPVIVVP 72 (301)
T ss_pred CeEEEEecCcc-cccccchHHHHHHHHHHHhc-CCCCEEEEccCcC-CCCCH----HHHHHH-HHHHhhccCCCceEeeC
Confidence 47999999995 4 22 23344455566654 7899999999999 44533 222211 11111225678999999
Q ss_pred CCCCCCCCccccccccccCCCCceeeeeeEEEcC-ceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHH
Q 026017 116 GNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNA-EIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQD 194 (244)
Q Consensus 116 GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~-~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~W 194 (244)
||||............. ..++. ..-.... +.++++.+||..... + .+.+.++|+. |
T Consensus 73 GNHD~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~d~~~~~~-----~------------~G~~~~~q~~-~ 129 (301)
T COG1409 73 GNHDARVVNGEAFSDQF---FNRYA--VLVGACSSGGWRVIGLDSSVPGV-----P------------LGRLGAEQLD-W 129 (301)
T ss_pred CCCcCCchHHHHhhhhh---cccCc--ceEeeccCCceEEEEecCCCCCC-----C------------CCEECHHHHH-H
Confidence 99998764322211000 00100 0001122 678999999987531 1 1123378999 9
Q ss_pred HHHHHhhCCCC---EEEEEcCcccccCCC
Q 026017 195 VDSALKESTAK---WKIVVGHHTIKSSGH 220 (244)
Q Consensus 195 L~~~L~~~~~~---~~iv~~H~P~~~~~~ 220 (244)
|++.|++.... .++++.|||+.+...
T Consensus 130 l~~~l~~~~~~~~~~~v~~~hh~~~~~~~ 158 (301)
T COG1409 130 LEEALAAAPERAKDTVVVLHHHPLPSPGT 158 (301)
T ss_pred HHHHHHhCccccCceEEEecCCCCCCCCC
Confidence 99999976443 567777777665443
No 20
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.44 E-value=5.2e-13 Score=107.31 Aligned_cols=136 Identities=20% Similarity=0.096 Sum_probs=79.1
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCC
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (244)
++++||+|. .. ..+.. ..+ ++.++|+|+++||++ +.|.. ... ..++. +..+++|++.++||||.
T Consensus 1 i~~~sD~H~--~~--~~~~~--~~~-~~~~~D~vv~~GDl~-~~~~~----~~~-~~~~~---l~~~~~p~~~v~GNHD~ 64 (188)
T cd07392 1 ILAISDIHG--DV--EKLEA--IIL-KAEEADAVIVAGDIT-NFGGK----EAA-VEINL---LLAIGVPVLAVPGNCDT 64 (188)
T ss_pred CEEEEecCC--CH--HHHHH--HHh-hccCCCEEEECCCcc-CcCCH----HHH-HHHHH---HHhcCCCEEEEcCCCCC
Confidence 478999995 22 22222 223 336899999999999 34322 111 11222 23457999999999997
Q ss_pred CCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHh
Q 026017 121 RGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALK 200 (244)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~ 200 (244)
...... .. ..........+..+++.|+++|+.... +. + ....+.++|++ |+ +.++
T Consensus 65 ~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~-----~----~~~~~~~~~l~-~~-~~l~ 119 (188)
T cd07392 65 PEILGL-LT-------SAGLNLHGKVVEVGGYTFVGIGGSNPT------PF-----N----TPIELSEEEIV-SD-GRLN 119 (188)
T ss_pred HHHHHh-hh-------cCcEecCCCEEEECCEEEEEeCCCCCC------CC-----C----CccccCHHHHH-Hh-hhhh
Confidence 532211 10 011111112244567999999975311 10 0 01123467899 98 5555
Q ss_pred hCCCCEEEEEcCccccc
Q 026017 201 ESTAKWKIVVGHHTIKS 217 (244)
Q Consensus 201 ~~~~~~~iv~~H~P~~~ 217 (244)
....+++|+++|+|++.
T Consensus 120 ~~~~~~~ilv~H~pp~~ 136 (188)
T cd07392 120 NLLAKNLILVTHAPPYG 136 (188)
T ss_pred ccCCCCeEEEECCCCcC
Confidence 55678899999999976
No 21
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.40 E-value=2.8e-12 Score=107.28 Aligned_cols=163 Identities=14% Similarity=0.108 Sum_probs=84.4
Q ss_pred EEEecCCCCC-------CCCh--HHHHHHHHHHHhhc--CCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCc
Q 026017 42 LVVGDWGRRG-------AYNQ--TKVAHQMGIVGEKL--KIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQ 110 (244)
Q Consensus 42 ~~igD~~~~~-------~~~q--~~v~~~i~~i~~~~--~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP 110 (244)
.+++|+|... .+.+ .+..+.+.+..+.. +||+|+++||++. .+.. .+..+..+.+ ..+..|
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~-~~~~----~~~~~~l~~l---~~l~~~ 73 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISW-AMKL----EEAKLDLAWI---DALPGT 73 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCcc-CCCh----HHHHHHHHHH---HhCCCC
Confidence 5789999521 1222 33444444332223 8999999999983 3211 1222222221 223568
Q ss_pred eEEecCCCCCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHH
Q 026017 111 WYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANL 190 (244)
Q Consensus 111 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q 190 (244)
++.|+||||+.......+...+.+. .+......++..+++.|++++...+......+.++... ....+.+..+|
T Consensus 74 v~~V~GNHD~~~~~~~~~~~~l~~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 147 (232)
T cd07393 74 KVLLKGNHDYWWGSASKLRKALEES--RLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLK----VEEDEKIFERE 147 (232)
T ss_pred eEEEeCCccccCCCHHHHHHHHHhc--CeEEeccCcEEECCEEEEEEEeeCCCCCcccccccccc----chhHHHHHHHH
Confidence 9999999998432111111111111 11111123344567999998743321100000000000 01123456789
Q ss_pred HHHHHHHHHhhCC----CCEEEEEcCcccccCC
Q 026017 191 LKQDVDSALKEST----AKWKIVVGHHTIKSSG 219 (244)
Q Consensus 191 l~~WL~~~L~~~~----~~~~iv~~H~P~~~~~ 219 (244)
++ ||++.|++.. .+++|+++|+|++...
T Consensus 148 l~-~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~ 179 (232)
T cd07393 148 LE-RLELSLKAAKKREKEKIKIVMLHYPPANEN 179 (232)
T ss_pred HH-HHHHHHHHHHhCCCCCCEEEEECCCCcCCC
Confidence 99 9999998642 2479999999997654
No 22
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.36 E-value=4.1e-12 Score=116.23 Aligned_cols=209 Identities=15% Similarity=0.144 Sum_probs=90.9
Q ss_pred ccCCCCCCccCCCCC-CCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCC------------
Q 026017 21 PSSAELPWFEHPAKP-DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLT------------ 87 (244)
Q Consensus 21 ~~~~~~~~~~~p~~~-~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~------------ 87 (244)
..+.++.+|+|+|.. ...+||++.|+.+.... ...+++.++++.+|||+|++||.+|.++..
T Consensus 87 ~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~-----~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r 161 (453)
T PF09423_consen 87 GQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDG-----YFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGR 161 (453)
T ss_dssp TEE---EEEE--TT-----EEEEEE----CCC--------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S--
T ss_pred CCCCCceEEEcCCCCCCCceEEEEECCCCcccC-----hHHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccccc
Confidence 455667789887643 45799999999763111 145566676646899999999999998630
Q ss_pred -------CcchhhhHHHhhhhccCCCC-----CCceEEecCCCCCCCCcccccc-------c--------cccC----CC
Q 026017 88 -------GVDDAAFFESFVNIYTAPSL-----AKQWYNVLGNHDYRGDVEAQLS-------P--------VLRD----ID 136 (244)
Q Consensus 88 -------~~~~~~~~~~~~~~~~~~~l-----~iP~~~v~GNHD~~~~~~~~~~-------~--------~~~~----~~ 136 (244)
...-..+.+.+......+.+ .+|++.++.+||+..+....-. . +++. ..
T Consensus 162 ~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p 241 (453)
T PF09423_consen 162 APEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQP 241 (453)
T ss_dssp ---SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS-
T ss_pred ccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcC
Confidence 00001222223222221211 5899999999999765321000 0 0000 00
Q ss_pred Cce------eeeeeEEEcCce-EEEEEEeCcccccccccCCCCCcCCCCC--CCc-chHHHHHHHHHHHHHHHhhCCCCE
Q 026017 137 SRW------LCLRSFIVNAEI-AEFIFVDTTPFVNKYFTDPEDHVYDWSG--IQP-RKSYLANLLKQDVDSALKESTAKW 206 (244)
Q Consensus 137 ~~~------~~p~~Ysf~~~~-~~fi~LDs~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~Ql~~WL~~~L~~~~~~~ 206 (244)
.+- ....+++|++|+ +.|++||+..+...-.. +. ....+. ..+ +.-+.++|++ ||++.|+++.++|
T Consensus 242 ~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~-~~--~~~~~~~~~~~~~~mLG~~Q~~-wL~~~L~~s~a~~ 317 (453)
T PF09423_consen 242 VRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPC-DG--PGDTCPAADDPSRTMLGEEQWD-WLEDWLASSQATW 317 (453)
T ss_dssp --GGG-BTTB----EEEEETTTEEEEE--SSSS----CC-CS--SEE--HHHH-TT--SS-HHHHH-HHHHHHHH--SSE
T ss_pred ccCCCccCCCCceEEEEecCCceeEEEEechhccccccc-cc--cccccccccCCccCcCCHHHHH-HHHHHHhcCCCcE
Confidence 000 011255689998 99999999987542000 00 000000 001 1123479999 9999999988999
Q ss_pred EEEEcCcccccCCC-------------CCChHhHHHHHHHHHHHH
Q 026017 207 KIVVGHHTIKSSGH-------------HGNTHELNLQLLPILQVI 238 (244)
Q Consensus 207 ~iv~~H~P~~~~~~-------------~g~~~~l~~~l~Pll~~~ 238 (244)
+||+.-.|+..... .++....|++|+-+|.+.
T Consensus 318 kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~ 362 (453)
T PF09423_consen 318 KVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRES 362 (453)
T ss_dssp EEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHT
T ss_pred EEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhh
Confidence 99998888654321 123456678888777654
No 23
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.31 E-value=6e-11 Score=101.49 Aligned_cols=81 Identities=17% Similarity=0.241 Sum_probs=52.1
Q ss_pred CCCCCeEEEEEecCCCCCCCCh-HHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceE
Q 026017 34 KPDGSLSFLVVGDWGRRGAYNQ-TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWY 112 (244)
Q Consensus 34 ~~~~~~~f~~igD~~~~~~~~q-~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~ 112 (244)
+..+++|+++++|+|. +.... ..+.+.++.+.+ .+||+|+++||++. .+... +...+.+.++.+. . ..|+|
T Consensus 45 ~~~~~~rI~~lSDlH~-~~~~~~~~l~~~v~~i~~-~~pDlVli~GD~~d-~~~~~-~~~~~~~~L~~L~---~-~~pv~ 116 (271)
T PRK11340 45 DNAAPFKILFLADLHY-SRFVPLSLISDAIALGIE-QKPDLILLGGDYVL-FDMPL-NFSAFSDVLSPLA---E-CAPTF 116 (271)
T ss_pred CCCCCcEEEEEcccCC-CCcCCHHHHHHHHHHHHh-cCCCEEEEccCcCC-CCccc-cHHHHHHHHHHHh---h-cCCEE
Confidence 4456799999999995 43333 345555565555 79999999999983 22111 1122333333321 1 47999
Q ss_pred EecCCCCCCC
Q 026017 113 NVLGNHDYRG 122 (244)
Q Consensus 113 ~v~GNHD~~~ 122 (244)
.|+||||+..
T Consensus 117 ~V~GNHD~~~ 126 (271)
T PRK11340 117 ACFGNHDRPV 126 (271)
T ss_pred EecCCCCccc
Confidence 9999999853
No 24
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.29 E-value=2e-11 Score=108.97 Aligned_cols=88 Identities=16% Similarity=0.035 Sum_probs=54.3
Q ss_pred eEEEc-CceE--EEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhhCC-C-CEEEEEcCcccccC
Q 026017 144 SFIVN-AEIA--EFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKEST-A-KWKIVVGHHTIKSS 218 (244)
Q Consensus 144 ~Ysf~-~~~~--~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~~-~-~~~iv~~H~P~~~~ 218 (244)
+|+|+ .+++ ++|+|||..+.+. ...++ .+ .+.+.++|++ ||+++|++.+ . +++|++.|+|+.+.
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~~-~s~pG----~~-----~G~Ld~eQLa-WLe~~La~a~a~~p~VVV~hHpPi~t~ 362 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEHD-GSHDI----HG-----HGSLDAKRWD-WLKAELARGQADGQLMIIAAHIPIAVS 362 (492)
T ss_pred eeEEecCCCcceEEEEECCCccccc-cCCCC----Cc-----ceeeCHHHHH-HHHHHHHhCcCCCceEEEEeCCCcccC
Confidence 78899 5745 9999999875431 00011 00 1234589999 9999999764 3 45666677776642
Q ss_pred CC-C----C--C---hH-----hHHHHHHHHHHHHHhhh
Q 026017 219 GH-H----G--N---TH-----ELNLQLLPILQVIYYLI 242 (244)
Q Consensus 219 ~~-~----g--~---~~-----~l~~~l~Pll~~~~~~~ 242 (244)
+. + + + .. ..-..|..+|++|++++
T Consensus 363 gi~~md~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVl 401 (492)
T TIGR03768 363 PIGSEMEWWLGAADANPDLQNAVSLTGLVTTLQKYPNLL 401 (492)
T ss_pred CccchhhhccccccccccccccccHHHHHHHHhcCCCeE
Confidence 21 1 0 0 00 11247889999998775
No 25
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.29 E-value=1e-10 Score=96.97 Aligned_cols=158 Identities=14% Similarity=0.037 Sum_probs=84.3
Q ss_pred CCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecC
Q 026017 37 GSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (244)
Q Consensus 37 ~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~G 116 (244)
..-+++++||+|. +...+.+.++ .+++.++|+|+++||+++ .|.. .++..+.++. +..+.+|++.++|
T Consensus 3 ~~~kIl~iSDiHg----n~~~le~l~~-~~~~~~~D~vv~~GDl~~-~g~~---~~~~~~~l~~---l~~l~~pv~~V~G 70 (224)
T cd07388 3 TVRYVLATSNPKG----DLEALEKLVG-LAPETGADAIVLIGNLLP-KAAK---SEDYAAFFRI---LGEAHLPTFYVPG 70 (224)
T ss_pred ceeEEEEEEecCC----CHHHHHHHHH-HHhhcCCCEEEECCCCCC-CCCC---HHHHHHHHHH---HHhcCCceEEEcC
Confidence 3468999999995 2333333344 333368999999999994 3311 1122222222 2345789999999
Q ss_pred CCCCCCCccccccccccC--CCCc-eeeeeeEEEcC-ceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHH-
Q 026017 117 NHDYRGDVEAQLSPVLRD--IDSR-WLCLRSFIVNA-EIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLL- 191 (244)
Q Consensus 117 NHD~~~~~~~~~~~~~~~--~~~~-~~~p~~Ysf~~-~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql- 191 (244)
|||.. ....+...+.. ..+. ...-..+ ..+ +.+.|++++...- .| .. ++++|.
T Consensus 71 NhD~~--v~~~l~~~~~~~~~~p~~~~lh~~~-~~~~g~~~~~GlGGs~~------~~----~e---------~sE~e~~ 128 (224)
T cd07388 71 PQDAP--LWEYLREAYNAELVHPEIRNVHETF-AFWRGPYLVAGVGGEIA------DE----GE---------PEEHEAL 128 (224)
T ss_pred CCChH--HHHHHHHHhcccccCccceecCCCe-EEecCCeEEEEecCCcC------CC----CC---------cCHHHHh
Confidence 99964 11111100100 0000 1000111 222 6689999996541 11 01 123331
Q ss_pred ---HHHHHH----HHhhCCCCEEEEEcCcccccCC-CCCChHhHHH
Q 026017 192 ---KQDVDS----ALKESTAKWKIVVGHHTIKSSG-HHGNTHELNL 229 (244)
Q Consensus 192 ---~~WL~~----~L~~~~~~~~iv~~H~P~~~~~-~~g~~~~l~~ 229 (244)
. ||.+ .+++...+..|+++|+|++..+ .|.+...+++
T Consensus 129 ~~~~-~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h~GS~alr~ 173 (224)
T cd07388 129 RYPA-WVAEYRLKALWELKDYRKVFLFHTPPYHKGLNEQGSHEVAH 173 (224)
T ss_pred hhhh-hHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCccCHHHHHH
Confidence 4 5433 3434456689999999999874 3555444443
No 26
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=99.23 E-value=1.2e-10 Score=102.82 Aligned_cols=123 Identities=19% Similarity=0.234 Sum_probs=82.5
Q ss_pred CCCCCeEEEEEecCCCCCCCC-------------hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhh-
Q 026017 34 KPDGSLSFLVVGDWGRRGAYN-------------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFV- 99 (244)
Q Consensus 34 ~~~~~~~f~~igD~~~~~~~~-------------q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~- 99 (244)
.+.+.++++.++|+|..|... ...+.+.......-.+||.++++||++ +.|... ++++|.+.++
T Consensus 44 ~~~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLf-DeG~~~-~~eEf~~~~~R 121 (410)
T KOG3662|consen 44 SNENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLF-DEGQWA-GDEEFKKRYER 121 (410)
T ss_pred CCCCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccc-ccCccC-ChHHHHHHHHH
Confidence 347889999999999777321 122233333323347999999999999 667764 5677877554
Q ss_pred --hhccCCCCCCceEEecCCCCCCCCccc---cccccccCCCCceeeeeeEEEcCceEEEEEEeCccccc
Q 026017 100 --NIYTAPSLAKQWYNVLGNHDYRGDVEA---QLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVN 164 (244)
Q Consensus 100 --~~~~~~~l~iP~~~v~GNHD~~~~~~~---~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~~~ 164 (244)
+++. ....+|.+.++||||.+...+. .++. + ...++|..-+|+.++..|+++|++...+
T Consensus 122 fkkIf~-~k~~~~~~~i~GNhDIGf~~~~~~~~i~R-f----e~~fg~~~r~f~v~~~tf~~~d~~~ls~ 185 (410)
T KOG3662|consen 122 FKKIFG-RKGNIKVIYIAGNHDIGFGNELIPEWIDR-F----ESVFGPTERRFDVGNLTFVMFDSNALSG 185 (410)
T ss_pred HHHhhC-CCCCCeeEEeCCccccccccccchhHHHH-H----HHhhcchhhhhccCCceeEEeeehhhcC
Confidence 4443 3357999999999999865321 1111 1 1223454556999999999999998654
No 27
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.22 E-value=1.3e-10 Score=96.23 Aligned_cols=77 Identities=23% Similarity=0.349 Sum_probs=48.9
Q ss_pred CeEEEEEecCCCCCCCC-hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecC
Q 026017 38 SLSFLVVGDWGRRGAYN-QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (244)
Q Consensus 38 ~~~f~~igD~~~~~~~~-q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~G 116 (244)
++|+++++|+|. +... ...+.+.++.+.+ .+||+|+++||+++ .+... ...+.+.+.. . ...+|++.++|
T Consensus 1 ~~~i~~~sDlH~-~~~~~~~~~~~~~~~~~~-~~~d~vl~~GD~~~-~~~~~--~~~~~~~l~~---l-~~~~~v~~v~G 71 (223)
T cd07385 1 GLRIAHLSDLHL-GPFVSRERLERLVEKINA-LKPDLVVLTGDLVD-GSVDV--LELLLELLKK---L-KAPLGVYAVLG 71 (223)
T ss_pred CCEEEEEeecCC-CccCCHHHHHHHHHHHhc-cCCCEEEEcCcccC-Ccchh--hHHHHHHHhc---c-CCCCCEEEECC
Confidence 479999999995 4332 2344455555544 68999999999994 32211 1122222222 1 23589999999
Q ss_pred CCCCCCC
Q 026017 117 NHDYRGD 123 (244)
Q Consensus 117 NHD~~~~ 123 (244)
|||+...
T Consensus 72 NHD~~~~ 78 (223)
T cd07385 72 NHDYYSG 78 (223)
T ss_pred CcccccC
Confidence 9998754
No 28
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.19 E-value=4.3e-10 Score=92.81 Aligned_cols=149 Identities=17% Similarity=0.148 Sum_probs=78.2
Q ss_pred EEEEEecCCCCCCCC--------hH---HHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC
Q 026017 40 SFLVVGDWGRRGAYN--------QT---KVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (244)
Q Consensus 40 ~f~~igD~~~~~~~~--------q~---~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~ 108 (244)
||++++|+|. +... .. ...+.+.+.+.+.+||+|+++||++. ....+ ...+....+.+......+
T Consensus 1 ~i~~~sD~Hl-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~-~~~~~--~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHL-GKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFD-SNNPS--PEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccC-CccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccC-CCCCC--HHHHHHHHHHHHHHHHCC
Confidence 5899999995 4321 11 12222222233478999999999984 32211 122222212211111237
Q ss_pred CceEEecCCCCCCCCccccccccccCCCCcee---------eeeeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCC
Q 026017 109 KQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWL---------CLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSG 179 (244)
Q Consensus 109 iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~---------~p~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~ 179 (244)
+|+++++||||........... .. ...+. .+....+...++.+++++....
T Consensus 77 ~~v~~~~GNHD~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~----------------- 136 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGALSPL--LA-LSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR----------------- 136 (223)
T ss_pred CCEEEecCCCCCccccccccch--Hh-hCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH-----------------
Confidence 8999999999987643221110 00 01111 1112234556788888875421
Q ss_pred CCcchHHHHHHHHHHHHHHHhh-CCCCEEEEEcCcccccC
Q 026017 180 IQPRKSYLANLLKQDVDSALKE-STAKWKIVVGHHTIKSS 218 (244)
Q Consensus 180 ~~~~~~~~~~Ql~~WL~~~L~~-~~~~~~iv~~H~P~~~~ 218 (244)
.....+++ +++..+.+ .+..+.|+++|+|+...
T Consensus 137 -----~~~~~~~~-~~~~~~~~~~~~~~~Il~~H~~~~~~ 170 (223)
T cd00840 137 -----SRLRDLLA-DAELRPRPLDPDDFNILLLHGGVAGA 170 (223)
T ss_pred -----HHHHHHHH-HHHHHhhccCCCCcEEEEEeeeeecC
Confidence 01123344 54544443 46788999999997654
No 29
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.19 E-value=6.3e-11 Score=105.21 Aligned_cols=186 Identities=13% Similarity=0.183 Sum_probs=110.3
Q ss_pred CCCCccCCCCCCCCeEEEEEecCCCCCCCC-hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcc-------h-----
Q 026017 25 ELPWFEHPAKPDGSLSFLVVGDWGRRGAYN-QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVD-------D----- 91 (244)
Q Consensus 25 ~~~~~~~p~~~~~~~~f~~igD~~~~~~~~-q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~-------~----- 91 (244)
++.|++|+|.....++|+.+||..+.+... -.+..++|. + .+||||||+||.+|+.|..... .
T Consensus 126 pvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma---~-~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~ 201 (522)
T COG3540 126 PVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMA---K-EEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQ 201 (522)
T ss_pred cccccccCCCCCCcchhhhhhhccccccccchhHHHHHHH---h-cCCCEEEEcCCeeeccCCcccccccccccccccCC
Confidence 778999999999999999999987633221 144445444 3 7899999999999998864110 0
Q ss_pred ---------hhhHHHhhhhccCC-----CCCCceEEecCCCCCCCCcccccc---ccccCC---------CCce--eee-
Q 026017 92 ---------AAFFESFVNIYTAP-----SLAKQWYNVLGNHDYRGDVEAQLS---PVLRDI---------DSRW--LCL- 142 (244)
Q Consensus 92 ---------~~~~~~~~~~~~~~-----~l~iP~~~v~GNHD~~~~~~~~~~---~~~~~~---------~~~~--~~p- 142 (244)
+++...+.....-. ....||++++..||..+|....+. ..+... ...| .||
T Consensus 202 ~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPi 281 (522)
T COG3540 202 HKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPI 281 (522)
T ss_pred CCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCcc
Confidence 11111111111111 125999999999998776432111 000000 0000 122
Q ss_pred ---------eeE-EEcCce-EEEEEEeCccccccc-ccCCCCCcCCCCCCCcchHH-HHHHHHHHHHHHHhhCCCCEEEE
Q 026017 143 ---------RSF-IVNAEI-AEFIFVDTTPFVNKY-FTDPEDHVYDWSGIQPRKSY-LANLLKQDVDSALKESTAKWKIV 209 (244)
Q Consensus 143 ---------~~Y-sf~~~~-~~fi~LDs~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~Ql~~WL~~~L~~~~~~~~iv 209 (244)
.-| +|.+|+ +.|.+||+..|..+- .+++......+ ..++...+ .++|.+ ||+..|.++++.|+|+
T Consensus 282 R~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~-~~~~~~~mlG~~Qeq-WLk~~L~~SkatWnVi 359 (522)
T COG3540 282 RYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQA-VAGSAATMLGEQQEQ-WLKRGLGASKATWNVI 359 (522)
T ss_pred ccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhh-hhCccccchhhHHHH-HHHhhhhhcchhhhhh
Confidence 234 588775 789999999975210 00110000011 01112223 467777 9999999999999999
Q ss_pred EcCcccc
Q 026017 210 VGHHTIK 216 (244)
Q Consensus 210 ~~H~P~~ 216 (244)
..-.|+-
T Consensus 360 a~q~~~~ 366 (522)
T COG3540 360 AQQMPLG 366 (522)
T ss_pred hhhccee
Confidence 9998863
No 30
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.14 E-value=8.3e-10 Score=94.56 Aligned_cols=162 Identities=23% Similarity=0.375 Sum_probs=93.1
Q ss_pred CCCCCeEEEEEecCCCCCCC----------Ch------HHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcch--hhhH
Q 026017 34 KPDGSLSFLVVGDWGRRGAY----------NQ------TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDD--AAFF 95 (244)
Q Consensus 34 ~~~~~~~f~~igD~~~~~~~----------~q------~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~--~~~~ 95 (244)
...+.||++.++|+|. |.- .+ -.....|+++.+.++||+|+++||+++.. . ..| .-+.
T Consensus 49 ~~~g~fKIlqvaDlH~-g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~--~-t~Da~~sl~ 124 (379)
T KOG1432|consen 49 REDGTFKILQVADLHF-GFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGH--S-TQDAATSLM 124 (379)
T ss_pred cCCCceEEEEeecccc-ccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccc--c-cHhHHHHHH
Confidence 4688999999999995 311 11 12334577766668999999999999542 1 122 1233
Q ss_pred HHhhhhccCCCCCCceEEecCCCCCCCCccc-cc-------cccccCCC--Ccee----eeeeEE------E-----cCc
Q 026017 96 ESFVNIYTAPSLAKQWYNVLGNHDYRGDVEA-QL-------SPVLRDID--SRWL----CLRSFI------V-----NAE 150 (244)
Q Consensus 96 ~~~~~~~~~~~l~iP~~~v~GNHD~~~~~~~-~~-------~~~~~~~~--~~~~----~p~~Ys------f-----~~~ 150 (244)
+++.. ....+|||.++.||||-.+.... ++ .+.+.+.. ..+. +-.+|- + ...
T Consensus 125 kAvaP---~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~s 201 (379)
T KOG1432|consen 125 KAVAP---AIDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKS 201 (379)
T ss_pred HHhhh---HhhcCCCeEEEecccccccccCHHHHHHHHhcCCCccccCCCcccceeeeecccceEEEeccCCCcccccCc
Confidence 33332 23458999999999998775422 11 11111110 0010 001221 1 112
Q ss_pred eEEEEEEeCcccccccccCC-CCCcCCCCCCCcchHHHHHHHHHHHHHHHhh-----C-CCC-EEEEEcCccc
Q 026017 151 IAEFIFVDTTPFVNKYFTDP-EDHVYDWSGIQPRKSYLANLLKQDVDSALKE-----S-TAK-WKIVVGHHTI 215 (244)
Q Consensus 151 ~~~fi~LDs~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~-----~-~~~-~~iv~~H~P~ 215 (244)
-..+++||+..+... + --..|+|- .+.|++ ||+..-.+ . -.+ +-+++.|.|+
T Consensus 202 v~~lyfld~~~~~s~----~~~~~~Ydwi--------k~sq~~-wl~~~~~~~~~~~~~~~P~p~La~~HIP~ 261 (379)
T KOG1432|consen 202 VFNLYFLDSSSYTSV----PPLLPGYDWI--------KESQLE-WLSDTSKEFKEPNSKYNPQPGLAFFHIPL 261 (379)
T ss_pred eeeEEEEecCCcccc----cccccCccch--------hhhhHH-HHhhhhhhhhcccCccCCCCceEEEEccc
Confidence 456888998875432 2 11245552 257889 99987621 1 123 6788899996
No 31
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.91 E-value=1.5e-09 Score=85.95 Aligned_cols=68 Identities=16% Similarity=0.064 Sum_probs=39.6
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCC
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (244)
|+++||+|. +....... +.+.....++|+++++||++. .+.. ..+.. +.. ......|++.++||||+
T Consensus 1 ~~~iSDlH~-~~~~~~~~---~~~~~~~~~~d~li~~GDi~~-~~~~----~~~~~-~~~---~~~~~~~v~~v~GNHD~ 67 (166)
T cd07404 1 IQYLSDLHL-EFEDNLAD---LLNFPIAPDADILVLAGDIGY-LTDA----PRFAP-LLL---ALKGFEPVIYVPGNHEF 67 (166)
T ss_pred CceEccccc-cCcccccc---ccccCCCCCCCEEEECCCCCC-Ccch----HHHHH-HHH---hhcCCccEEEeCCCcce
Confidence 578999995 32211111 112223368999999999983 3211 12221 111 12336899999999997
Q ss_pred C
Q 026017 121 R 121 (244)
Q Consensus 121 ~ 121 (244)
.
T Consensus 68 ~ 68 (166)
T cd07404 68 Y 68 (166)
T ss_pred E
Confidence 5
No 32
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.85 E-value=1.8e-07 Score=85.73 Aligned_cols=145 Identities=21% Similarity=0.284 Sum_probs=80.3
Q ss_pred HHHHHHHHHHhhcC-CCEEEEcCCcccCCCCCCcchhhhHHHhhhhcc-C-CCC-CCceEEecCCCCCCCC--cc----c
Q 026017 57 KVAHQMGIVGEKLK-IDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-A-PSL-AKQWYNVLGNHDYRGD--VE----A 126 (244)
Q Consensus 57 ~v~~~i~~i~~~~~-pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~-~-~~l-~iP~~~v~GNHD~~~~--~~----~ 126 (244)
.+..+|+.+++..+ +|+|+++||++-.. ......++-......+.. + +.+ ++|+|++.||||.... .. .
T Consensus 196 lies~L~~ike~~~~iD~I~wTGD~~~H~-~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~ 274 (577)
T KOG3770|consen 196 LIESALDHIKENHKDIDYIIWTGDNVAHD-VWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVP 274 (577)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCCccc-chhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCc
Confidence 34566777877655 99999999999322 211010100111111111 0 112 6999999999997521 00 0
Q ss_pred cc---ccccc---CCCCceeee---------eeEEEc-CceEEEEEEeCcccccccccCCCCCcCCC---CCCCcchHHH
Q 026017 127 QL---SPVLR---DIDSRWLCL---------RSFIVN-AEIAEFIFVDTTPFVNKYFTDPEDHVYDW---SGIQPRKSYL 187 (244)
Q Consensus 127 ~~---~~~~~---~~~~~~~~p---------~~Ysf~-~~~~~fi~LDs~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 187 (244)
+. ...|. .....|.-+ .+|... .++.++|.||+..... + ..| +...+
T Consensus 275 ~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~-----~----N~~L~~n~tdp----- 340 (577)
T KOG3770|consen 275 KRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSA-----P----NFWLYANQTDP----- 340 (577)
T ss_pred chhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccc-----c----ceeeeecCCCc-----
Confidence 00 00011 112333311 355532 4899999999986321 1 112 22222
Q ss_pred HHHHHHHHHHHHhh--CCCCEEEEEcCccccc
Q 026017 188 ANLLKQDVDSALKE--STAKWKIVVGHHTIKS 217 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~--~~~~~~iv~~H~P~~~ 217 (244)
..|++ |+..+|.+ ++..-|=+++|.|+-.
T Consensus 341 ~~~lq-Wf~~~L~~ae~~GekVhil~HIPpG~ 371 (577)
T KOG3770|consen 341 IDQLQ-WFVDQLQEAESAGEKVHILGHIPPGD 371 (577)
T ss_pred hHHhh-HHHHHHHHHHhcCCEEEEEEeeCCCC
Confidence 46788 99999975 3667788999999854
No 33
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.75 E-value=3.5e-08 Score=79.84 Aligned_cols=54 Identities=22% Similarity=0.478 Sum_probs=38.4
Q ss_pred hhcCCCEEEEcCCcccCCCCCCcchhhhHHHh---hhhccCCCCCCceEEecCCCCCCCC
Q 026017 67 EKLKIDFIISTGDNFYDDGLTGVDDAAFFESF---VNIYTAPSLAKQWYNVLGNHDYRGD 123 (244)
Q Consensus 67 ~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~---~~~~~~~~l~iP~~~v~GNHD~~~~ 123 (244)
+..+||+|+++||++ +.|... .+.+|.+.+ .+++.. ...+|++.++||||.++.
T Consensus 39 ~~l~PD~Vi~lGDL~-D~G~~~-~~~e~~e~l~Rf~~If~~-~~~~~~~~VpGNHDIG~~ 95 (195)
T cd08166 39 NFVQPDIVIFLGDLM-DEGSIA-NDDEYYSYVQRFINIFEV-PNGTKIIYLPGDNDIGGE 95 (195)
T ss_pred hccCCCEEEEecccc-CCCCCC-CHHHHHHHHHHHHHHhcC-CCCCcEEEECCCCCcCCC
Confidence 336999999999999 566543 345566543 344432 337999999999999863
No 34
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.67 E-value=6.4e-08 Score=87.02 Aligned_cols=80 Identities=23% Similarity=0.387 Sum_probs=51.0
Q ss_pred eEEEEEecCCCCCC--CC----hHHHHHHHH---HHHhhcCCCEEEEcCCcccCCCCCCcchh-hhHHHhhhhccCCCCC
Q 026017 39 LSFLVVGDWGRRGA--YN----QTKVAHQMG---IVGEKLKIDFIISTGDNFYDDGLTGVDDA-AFFESFVNIYTAPSLA 108 (244)
Q Consensus 39 ~~f~~igD~~~~~~--~~----q~~v~~~i~---~i~~~~~pdfvl~~GDlvy~~G~~~~~~~-~~~~~~~~~~~~~~l~ 108 (244)
+||+.++|+|. |. .+ .++..+++. .++++.++||||++||++ +.+.++.... .+.+.++. +...+
T Consensus 1 mkilHtSD~HL-G~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlF-d~~~Ps~~a~~~~~~~l~~---l~~~~ 75 (390)
T COG0420 1 MKILHTSDWHL-GSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLF-DTNNPSPRALKLFLEALRR---LKDAG 75 (390)
T ss_pred CeeEEeccccc-chhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccc-cCCCCCHHHHHHHHHHHHH---hccCC
Confidence 48999999994 62 11 123333332 334457999999999998 6666653322 22233333 34468
Q ss_pred CceEEecCCCCCCCC
Q 026017 109 KQWYNVLGNHDYRGD 123 (244)
Q Consensus 109 iP~~~v~GNHD~~~~ 123 (244)
+|+|+++||||....
T Consensus 76 Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 76 IPVVVIAGNHDSPSR 90 (390)
T ss_pred CcEEEecCCCCchhc
Confidence 999999999997643
No 35
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.65 E-value=7.6e-08 Score=75.61 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=46.0
Q ss_pred EEEecCCCCCCCCh---------HHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhcc-CC-CCCCc
Q 026017 42 LVVGDWGRRGAYNQ---------TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-AP-SLAKQ 110 (244)
Q Consensus 42 ~~igD~~~~~~~~q---------~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~-~~-~l~iP 110 (244)
++++|+|..+.... ..+.+.+.++.+..+||+|+++||++ +.+... .+.+|.+.+..+.. .. ...+|
T Consensus 1 ~~isD~HL~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~pd~vv~~GDl~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 78 (156)
T cd08165 1 MFLADTHLLGSILGHWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLF-DEGKWS-TDEEWEDYVERFKKMFGHPPDLP 78 (156)
T ss_pred CccccchhcCCcccHHHHHHhhhHHHHHHHHHHHHhcCCCEEEECCCCC-CCCccC-CHHHHHHHHHHHHHHhccCCCCe
Confidence 36889985332211 11333444444457999999999999 444322 22344333222211 11 23689
Q ss_pred eEEecCCCCCCC
Q 026017 111 WYNVLGNHDYRG 122 (244)
Q Consensus 111 ~~~v~GNHD~~~ 122 (244)
++.++||||...
T Consensus 79 i~~v~GNHD~~~ 90 (156)
T cd08165 79 LHVVVGNHDIGF 90 (156)
T ss_pred EEEEcCCCCcCC
Confidence 999999999864
No 36
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.64 E-value=1.1e-07 Score=73.32 Aligned_cols=74 Identities=23% Similarity=0.211 Sum_probs=41.0
Q ss_pred EEEEecCCCCCCCCh---HHHH---HHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEe
Q 026017 41 FLVVGDWGRRGAYNQ---TKVA---HQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNV 114 (244)
Q Consensus 41 f~~igD~~~~~~~~q---~~v~---~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v 114 (244)
++.++|+|. +.... .... +.+.+..++.+||+|+++||+++ .|... +-..+.+.++. .....+|++.+
T Consensus 1 il~isD~Hl-~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~-~~~~~-~~~~~~~~~~~---l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHF-GPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQ-RGLPE-EFEEAREFLDA---LPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCC-CCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCC-CCCHH-HHHHHHHHHHH---ccccCCcEEEe
Confidence 578999995 43321 1111 11222233478999999999995 33211 00112222222 12222699999
Q ss_pred cCCCCC
Q 026017 115 LGNHDY 120 (244)
Q Consensus 115 ~GNHD~ 120 (244)
+||||.
T Consensus 75 ~GNHD~ 80 (144)
T cd07400 75 PGNHDV 80 (144)
T ss_pred CCCCeE
Confidence 999997
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.62 E-value=6.7e-07 Score=74.65 Aligned_cols=65 Identities=26% Similarity=0.355 Sum_probs=41.8
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
+|++++||+|. ..... .++.+.+ .+||+|+++||++ +. ..+..+ .+ ..+..|++.++|||
T Consensus 1 ~rIa~isDiHg--~~~~~----~~~~l~~-~~pD~Vl~~GDi~-~~------~~~~~~---~l---~~l~~p~~~V~GNH 60 (238)
T cd07397 1 LRIAIVGDVHG--QWDLE----DIKALHL-LQPDLVLFVGDFG-NE------SVQLVR---AI---SSLPLPKAVILGNH 60 (238)
T ss_pred CEEEEEecCCC--CchHH----HHHHHhc-cCCCEEEECCCCC-cC------hHHHHH---HH---HhCCCCeEEEcCCC
Confidence 58999999995 22221 1223333 6899999999997 21 122222 21 23467999999999
Q ss_pred CCCCC
Q 026017 119 DYRGD 123 (244)
Q Consensus 119 D~~~~ 123 (244)
|....
T Consensus 61 D~~~~ 65 (238)
T cd07397 61 DAWYD 65 (238)
T ss_pred ccccc
Confidence 97653
No 38
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.60 E-value=1e-07 Score=80.76 Aligned_cols=79 Identities=23% Similarity=0.327 Sum_probs=46.9
Q ss_pred eEEEEEecCCCCCCC--C------hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchh-hhHHHhhhhccCCCCC-
Q 026017 39 LSFLVVGDWGRRGAY--N------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDA-AFFESFVNIYTAPSLA- 108 (244)
Q Consensus 39 ~~f~~igD~~~~~~~--~------q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~-~~~~~~~~~~~~~~l~- 108 (244)
+||++++|+|. |.. . +....+.+.+++.+.+||+|+++||++ +...++.... .+.+.++.+ ....
T Consensus 1 mkilh~SD~Hl-g~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~-d~~~p~~~~~~~~~~~l~~l---~~~~~ 75 (253)
T TIGR00619 1 MRILHTSDWHL-GKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVF-DTANPPAEAQELFNAFFRNL---SDANP 75 (253)
T ss_pred CEEEEEhhhcC-CCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccC-CCCCCCHHHHHHHHHHHHHH---HhcCC
Confidence 48999999995 431 1 112222333333447899999999998 4443321111 122333332 2234
Q ss_pred CceEEecCCCCCCC
Q 026017 109 KQWYNVLGNHDYRG 122 (244)
Q Consensus 109 iP~~~v~GNHD~~~ 122 (244)
+|++.++||||...
T Consensus 76 i~v~~i~GNHD~~~ 89 (253)
T TIGR00619 76 IPIVVISGNHDSAQ 89 (253)
T ss_pred ceEEEEccCCCChh
Confidence 99999999999754
No 39
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.59 E-value=1.5e-07 Score=83.10 Aligned_cols=79 Identities=23% Similarity=0.233 Sum_probs=46.0
Q ss_pred eEEEEEecCCCCCCC--C------hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHH--hhhhccCCCCC
Q 026017 39 LSFLVVGDWGRRGAY--N------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFES--FVNIYTAPSLA 108 (244)
Q Consensus 39 ~~f~~igD~~~~~~~--~------q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~--~~~~~~~~~l~ 108 (244)
+||+.+||+|. |.. + +....+.+-.++.+.+||+|+++||++............+... +.. +...+
T Consensus 1 MKilhiSD~HL-G~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~---L~~~g 76 (340)
T PHA02546 1 MKILLIGDQHL-GVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDL---LKEAG 76 (340)
T ss_pred CeEEEEeeecC-CCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHH---HHHCC
Confidence 48999999994 532 1 1122222222344579999999999983321121111122221 111 23447
Q ss_pred CceEEecCCCCCC
Q 026017 109 KQWYNVLGNHDYR 121 (244)
Q Consensus 109 iP~~~v~GNHD~~ 121 (244)
+|++.++||||..
T Consensus 77 i~v~~I~GNHD~~ 89 (340)
T PHA02546 77 ITLHVLVGNHDMY 89 (340)
T ss_pred CeEEEEccCCCcc
Confidence 9999999999975
No 40
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.57 E-value=1.7e-07 Score=84.52 Aligned_cols=80 Identities=24% Similarity=0.288 Sum_probs=48.1
Q ss_pred eEEEEEecCCCCCCC--C------hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhh-hHHHhhhhccCCCCCC
Q 026017 39 LSFLVVGDWGRRGAY--N------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAA-FFESFVNIYTAPSLAK 109 (244)
Q Consensus 39 ~~f~~igD~~~~~~~--~------q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~-~~~~~~~~~~~~~l~i 109 (244)
+||++++|+|. |.. + +..+.+.+.+++.+.+||+|+++||++ +.+.+...... +.+.+.. +...++
T Consensus 1 mkilh~SDlHl-G~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDif-D~~~p~~~a~~~~~~~l~~---L~~~~~ 75 (407)
T PRK10966 1 MRILHTSDWHL-GQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIF-DTGSPPSYARELYNRFVVN---LQQTGC 75 (407)
T ss_pred CEEEEEcccCC-CCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccc-cCCCCcHHHHHHHHHHHHH---HHhcCC
Confidence 48999999995 531 1 122233333333447999999999998 55443211111 1122222 233478
Q ss_pred ceEEecCCCCCCCC
Q 026017 110 QWYNVLGNHDYRGD 123 (244)
Q Consensus 110 P~~~v~GNHD~~~~ 123 (244)
|++.++||||....
T Consensus 76 ~v~~I~GNHD~~~~ 89 (407)
T PRK10966 76 QLVVLAGNHDSVAT 89 (407)
T ss_pred cEEEEcCCCCChhh
Confidence 99999999997653
No 41
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.46 E-value=3.1e-06 Score=69.28 Aligned_cols=177 Identities=12% Similarity=0.091 Sum_probs=78.5
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHH----------------------
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFE---------------------- 96 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~---------------------- 96 (244)
-++++++|.+. .-+.+.+....+.+ .+||+++++||++-..+ ...+|..
T Consensus 6 ~kilA~s~~~g----~~e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e 76 (255)
T PF14582_consen 6 RKILAISNFRG----DFELLERLVEVIPE-KGPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSE 76 (255)
T ss_dssp -EEEEEE--TT-----HHHHHHHHHHHHH-HT-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHH
T ss_pred hhheeecCcch----HHHHHHHHHhhccc-cCCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHH
Confidence 47899999874 12333344444444 79999999999983221 2234540
Q ss_pred Hhhhhc-cCCCCCCceEEecCCCCCCCCccccccccccC--CCCceeee-eeEEEcCceEEEEEEeCcccccccccCCCC
Q 026017 97 SFVNIY-TAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRD--IDSRWLCL-RSFIVNAEIAEFIFVDTTPFVNKYFTDPED 172 (244)
Q Consensus 97 ~~~~~~-~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~--~~~~~~~p-~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~ 172 (244)
.+..++ .+..+++|++++|||||..... .+.+.+.. ..+...+- ..+.+-.|...++++-...-... .+
T Consensus 77 ~~~~ff~~L~~~~~p~~~vPG~~Dap~~~--~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~---~~-- 149 (255)
T PF14582_consen 77 ALDKFFRILGELGVPVFVVPGNMDAPERF--FLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQ---RE-- 149 (255)
T ss_dssp HHHHHHHHHHCC-SEEEEE--TTS-SHHH--HHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS----B--
T ss_pred HHHHHHHHHHhcCCcEEEecCCCCchHHH--HHHHHhccceeccceeeeeeeecccCCcEEEEecCccccCCC---cc--
Confidence 011122 1346799999999999974321 01000100 00111100 11223334566666665543210 01
Q ss_pred CcCCCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEEcCccc-ccCC-CCCChHhHHHHHHHHHHHHHhhhc
Q 026017 173 HVYDWSGIQPRKSYLANLLKQDVDSALKESTAKWKIVVGHHTI-KSSG-HHGNTHELNLQLLPILQVIYYLII 243 (244)
Q Consensus 173 ~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~~~~~~iv~~H~P~-~~~~-~~g~~~~l~~~l~Pll~~~~~~~~ 243 (244)
....+ +-+..+ .+ |..+.|...+...+|+.+|.|+ +..+ .|.+...+ .-++++|.+-++
T Consensus 150 ---~~~~L--rYP~we--ae-y~lk~l~elk~~r~IlLfhtpPd~~kg~~h~GS~~V----~dlIk~~~P~iv 210 (255)
T PF14582_consen 150 ---EEFKL--RYPAWE--AE-YSLKFLRELKDYRKILLFHTPPDLHKGLIHVGSAAV----RDLIKTYNPDIV 210 (255)
T ss_dssp ---CSSS---EEEHHH--HH-HHHGGGGGCTSSEEEEEESS-BTBCTCTBTTSBHHH----HHHHHHH--SEE
T ss_pred ---ccccc--cchHHH--HH-HHHHHHHhcccccEEEEEecCCccCCCcccccHHHH----HHHHHhcCCcEE
Confidence 00000 001122 23 5556666666778899999999 6555 56554333 344555655443
No 42
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.45 E-value=1.2e-06 Score=72.73 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=56.6
Q ss_pred hcCCCEEEEcCCcccCCCCCC-----------------cchhhhHHHhhhhccCC-----CCCCceEEecCCCCCCCCcc
Q 026017 68 KLKIDFIISTGDNFYDDGLTG-----------------VDDAAFFESFVNIYTAP-----SLAKQWYNVLGNHDYRGDVE 125 (244)
Q Consensus 68 ~~~pdfvl~~GDlvy~~G~~~-----------------~~~~~~~~~~~~~~~~~-----~l~iP~~~v~GNHD~~~~~~ 125 (244)
+.+||+++++||.+|.++... .....+.+.+...+..+ ..++|++.++.+||+..+..
T Consensus 27 ~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~ 106 (228)
T cd07389 27 EEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWG 106 (228)
T ss_pred ccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEeccccccccccc
Confidence 479999999999999986421 11122333333322222 12589999999999976532
Q ss_pred cc--------ccc--------c---ccC---CCCc--eeeeeeEEEcCceE-EEEEEeCcccc
Q 026017 126 AQ--------LSP--------V---LRD---IDSR--WLCLRSFIVNAEIA-EFIFVDTTPFV 163 (244)
Q Consensus 126 ~~--------~~~--------~---~~~---~~~~--~~~p~~Ysf~~~~~-~fi~LDs~~~~ 163 (244)
.. ... . +.. .... ...+.++++..|.. .|++||+..+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R 169 (228)
T cd07389 107 GDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR 169 (228)
T ss_pred cccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc
Confidence 21 000 0 000 0011 11124567888886 99999999865
No 43
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.45 E-value=3.1e-07 Score=73.27 Aligned_cols=63 Identities=32% Similarity=0.417 Sum_probs=39.4
Q ss_pred HHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHH---hhhhccCCC---CCCceEEecCCCCCCCC
Q 026017 59 AHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFES---FVNIYTAPS---LAKQWYNVLGNHDYRGD 123 (244)
Q Consensus 59 ~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~---~~~~~~~~~---l~iP~~~v~GNHD~~~~ 123 (244)
.+.+..+.+..+||+|+++||++ +.+... ....|.+. |..++.... ..+|++.++||||.+..
T Consensus 34 ~~~~~~~i~~~~pd~vi~lGDl~-d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~~ 102 (171)
T cd07384 34 RRAFKTALQRLKPDVVLFLGDLF-DGGRIA-DSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGYG 102 (171)
T ss_pred HHHHHHHHHhcCCCEEEEecccc-CCcEeC-CHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCCC
Confidence 34445455558999999999999 444322 22334433 333332122 26899999999999754
No 44
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.44 E-value=1e-06 Score=79.18 Aligned_cols=50 Identities=20% Similarity=0.269 Sum_probs=32.4
Q ss_pred CCeEEEEEecCCCCCCC-C-------hHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCC
Q 026017 37 GSLSFLVVGDWGRRGAY-N-------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTG 88 (244)
Q Consensus 37 ~~~~f~~igD~~~~~~~-~-------q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~ 88 (244)
+.+||++++|+|. |.. . +....+.+-+++.+.++|+||++||++ +.+.++
T Consensus 2 ~~mKIlh~SD~Hl-G~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLF-d~~~Ps 59 (405)
T TIGR00583 2 DTIRILVSTDNHV-GYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLF-HENKPS 59 (405)
T ss_pred CceEEEEEcCCCC-CCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccC-CCCCCC
Confidence 4689999999995 521 1 112222222334457999999999998 555554
No 45
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.41 E-value=7.9e-07 Score=69.01 Aligned_cols=92 Identities=21% Similarity=0.334 Sum_probs=52.1
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
.|++++||+|. +...+.+.++.+ .+||+|+++||++. ..++.+.++. +|++.+.|||
T Consensus 1 Mki~~~sD~H~----~~~~~~~~~~~~---~~~d~vi~~GDi~~--------~~~~~~~~~~--------~~~~~v~GNH 57 (156)
T PF12850_consen 1 MKIAVISDLHG----NLDALEAVLEYI---NEPDFVIILGDIFD--------PEEVLELLRD--------IPVYVVRGNH 57 (156)
T ss_dssp EEEEEEE--TT----THHHHHHHHHHH---TTESEEEEES-SCS--------HHHHHHHHHH--------HEEEEE--CC
T ss_pred CEEEEEeCCCC----ChhHHHHHHHHh---cCCCEEEECCCchh--------HHHHHHHHhc--------CCEEEEeCCc
Confidence 58999999996 344445555554 36999999999982 1333333322 2899999999
Q ss_pred CCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCccc
Q 026017 119 DYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPF 162 (244)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~~ 162 (244)
|... ..... .... .+..+.+..+..++++++...+
T Consensus 58 D~~~-~~~~~-------~~~~-~~~~~~~~~~~~~i~~~H~~~~ 92 (156)
T PF12850_consen 58 DNWA-FPNEN-------DEEY-LLDALRLTIDGFKILLSHGHPY 92 (156)
T ss_dssp HSTH-HHSEE-------CTCS-SHSEEEEEETTEEEEEESSTSS
T ss_pred cccc-chhhh-------hccc-cccceeeeecCCeEEEECCCCc
Confidence 9542 11100 0000 1233445667788999998653
No 46
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.37 E-value=8.6e-06 Score=69.26 Aligned_cols=160 Identities=17% Similarity=0.154 Sum_probs=80.0
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhh--cCCCEEEEcCCcccCCCCCCcch--------hhhHHHhhhhcc-CCCCCC
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEK--LKIDFIISTGDNFYDDGLTGVDD--------AAFFESFVNIYT-APSLAK 109 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~--~~pdfvl~~GDlvy~~G~~~~~~--------~~~~~~~~~~~~-~~~l~i 109 (244)
+++.||+|+ . -..+.+.++.+.++ .++|++|.+||+. ..+..++.+ ..+ ..|.+.+. ....++
T Consensus 1 i~v~Gd~HG--~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~-~~~~~~d~~~~~~p~k~~~~-~~f~~~~~g~~~~p~ 74 (262)
T cd00844 1 IAVEGCCHG--E--LDKIYETLEKIEKKEGTKVDLLICCGDFQ-AVRNEADLKCMAVPPKYRKM-GDFYKYYSGEKKAPI 74 (262)
T ss_pred CEEEecCCc--c--HHHHHHHHHHHHHhcCCCCcEEEEcCCCC-CcCCcchhhhhccchhhhhh-hhHHHHhcCCccCCe
Confidence 478999995 2 23444444444332 4689999999986 222111100 011 12223332 234578
Q ss_pred ceEEecCCCCCCCCccccccccccCCCCceeeeeeE------EEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcc
Q 026017 110 QWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSF------IVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPR 183 (244)
Q Consensus 110 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Y------sf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~ 183 (244)
|++.|.||||-..... .+. ...|..|..| .+..+++++..|-...-...|...+ .+ .
T Consensus 75 ~t~fi~GNHE~~~~l~-~l~------~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~-----~~-----~ 137 (262)
T cd00844 75 LTIFIGGNHEASNYLW-ELP------YGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGH-----FE-----R 137 (262)
T ss_pred eEEEECCCCCCHHHHH-hhc------CCCeecCcEEEecCCCEEEECCeEEEEeccccccccccccc-----cc-----C
Confidence 8899999999532211 110 1233334222 2556788888887654222221110 00 0
Q ss_pred hHHHHHHHHHHHH-------HHHhhCCCCEEEEEcCcccccCCCCCCh
Q 026017 184 KSYLANLLKQDVD-------SALKESTAKWKIVVGHHTIKSSGHHGNT 224 (244)
Q Consensus 184 ~~~~~~Ql~~WL~-------~~L~~~~~~~~iv~~H~P~~~~~~~g~~ 224 (244)
..+.+.+++ .+- ..|.......=|+++|.|+..-..+++.
T Consensus 138 ~~~t~~~~r-s~y~~r~~~~~kl~~~~~~vDIlLSHdWP~gI~~~~~~ 184 (262)
T cd00844 138 PPYSEDTKR-SAYHVRNIEVFKLKQLKQPIDIFLSHDWPRGIYKHGDK 184 (262)
T ss_pred CCCCHHHHH-HhhhhhHHHHHHHHhcCCCCcEEEeCCCCcchhhccch
Confidence 011123332 211 1122223355799999999877666653
No 47
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.32 E-value=2.9e-06 Score=72.99 Aligned_cols=81 Identities=22% Similarity=0.238 Sum_probs=51.8
Q ss_pred CCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEe
Q 026017 35 PDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNV 114 (244)
Q Consensus 35 ~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v 114 (244)
...+++++.++|.|.. ... .+..+.+.++.. ..||+|+.+||++.....+ ...++.+....+ ....++|++
T Consensus 41 ~~~~~~iv~lSDlH~~-~~~-~~~~~~~~~i~~-~~~DlivltGD~~~~~~~~--~~~~~~~~L~~L----~~~~gv~av 111 (284)
T COG1408 41 SLQGLKIVQLSDLHSL-PFR-EEKLALLIAIAN-ELPDLIVLTGDYVDGDRPP--GVAALALFLAKL----KAPLGVFAV 111 (284)
T ss_pred ccCCeEEEEeehhhhc-hhh-HHHHHHHHHHHh-cCCCEEEEEeeeecCCCCC--CHHHHHHHHHhh----hccCCEEEE
Confidence 4678999999999963 322 333444455554 5779999999999421121 122333333332 125789999
Q ss_pred cCCCCCCCCc
Q 026017 115 LGNHDYRGDV 124 (244)
Q Consensus 115 ~GNHD~~~~~ 124 (244)
.||||+....
T Consensus 112 ~GNHd~~~~~ 121 (284)
T COG1408 112 LGNHDYGVDR 121 (284)
T ss_pred eccccccccc
Confidence 9999998654
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.30 E-value=1.7e-06 Score=72.31 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=42.3
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHhh-cCCCEEEEcCCcccCCCCCCcchhhhHHHhhh-hccCCCCCCceEEecCCCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFVN-IYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~~-~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~-~~~~~~l~iP~~~v~GNHD 119 (244)
+++||+|. +..........++.+.+. .+||+|+++||++ +..........+.+.+.. +..+...++|++.++||||
T Consensus 2 ~~iSDlHl-~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~-d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD 79 (231)
T TIGR01854 2 LFISDLHL-SPERPDITALFLDFLREEARKADALYILGDLF-EAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRD 79 (231)
T ss_pred eEEEecCC-CCCChhHHHHHHHHHHhhhccCCEEEEcCcee-ccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 68999995 433222222333444332 3899999999999 321100000111111111 1112233689999999999
Q ss_pred CCC
Q 026017 120 YRG 122 (244)
Q Consensus 120 ~~~ 122 (244)
...
T Consensus 80 ~~~ 82 (231)
T TIGR01854 80 FLI 82 (231)
T ss_pred hhh
Confidence 753
No 49
>PRK09453 phosphodiesterase; Provisional
Probab=98.29 E-value=2.3e-06 Score=68.77 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=43.7
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcch--hhhHHHhhhhccCCCCCCceEEecC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDD--AAFFESFVNIYTAPSLAKQWYNVLG 116 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~--~~~~~~~~~~~~~~~l~iP~~~v~G 116 (244)
.|++++||+|. +...+.+.++.+.+ .++|.++++||++. .|...... ....+.++. +..+..+++.+.|
T Consensus 1 mri~viSD~Hg----~~~~~~~~l~~~~~-~~~d~ii~lGDi~~-~~~~~~~~~~~~~~~~~~~---l~~~~~~v~~V~G 71 (182)
T PRK09453 1 MKLMFASDTHG----SLPATEKALELFAQ-SGADWLVHLGDVLY-HGPRNPLPEGYAPKKVAEL---LNAYADKIIAVRG 71 (182)
T ss_pred CeEEEEEeccC----CHHHHHHHHHHHHh-cCCCEEEEcccccc-cCcCCCCccccCHHHHHHH---HHhcCCceEEEcc
Confidence 37899999995 22333344444433 78999999999983 33211000 011111222 1234578999999
Q ss_pred CCCCC
Q 026017 117 NHDYR 121 (244)
Q Consensus 117 NHD~~ 121 (244)
|||..
T Consensus 72 NhD~~ 76 (182)
T PRK09453 72 NCDSE 76 (182)
T ss_pred CCcch
Confidence 99964
No 50
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.28 E-value=2.2e-06 Score=72.05 Aligned_cols=79 Identities=15% Similarity=0.129 Sum_probs=43.2
Q ss_pred EEEEEecCCCCCCCChH---HHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHh-hhhccCCCCCCceEEec
Q 026017 40 SFLVVGDWGRRGAYNQT---KVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESF-VNIYTAPSLAKQWYNVL 115 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~---~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~-~~~~~~~~l~iP~~~v~ 115 (244)
+++++||+|. +..... .+.+.++.. ..+||+|+++||++. ..........+.... +.+..+...++|++.++
T Consensus 2 ~i~~iSDlHl-~~~~~~~~~~~~~~l~~~--~~~~d~l~i~GDl~d-~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~ 77 (241)
T PRK05340 2 PTLFISDLHL-SPERPAITAAFLRFLRGE--ARQADALYILGDLFE-AWIGDDDPSPFAREIAAALKALSDSGVPCYFMH 77 (241)
T ss_pred cEEEEeecCC-CCCChhHHHHHHHHHHhh--hccCCEEEEccceec-cccccCcCCHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 6899999995 433322 233333221 258999999999983 211100001111111 11111223358999999
Q ss_pred CCCCCCC
Q 026017 116 GNHDYRG 122 (244)
Q Consensus 116 GNHD~~~ 122 (244)
||||...
T Consensus 78 GNHD~~~ 84 (241)
T PRK05340 78 GNRDFLL 84 (241)
T ss_pred CCCchhh
Confidence 9999753
No 51
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.28 E-value=2.9e-06 Score=67.59 Aligned_cols=76 Identities=22% Similarity=0.132 Sum_probs=44.2
Q ss_pred EEEecCCCCCCC------------Ch-HHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC
Q 026017 42 LVVGDWGRRGAY------------NQ-TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (244)
Q Consensus 42 ~~igD~~~~~~~------------~q-~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~ 108 (244)
++++|+|. |.. .+ ++..+.+.++.++.+||.++++||+++..... ....+.. .. ........
T Consensus 1 l~isDlHl-G~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~--~~~~~~~-~~-~~~~~~~~ 75 (172)
T cd07391 1 LVVADLHL-GKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGL--SRQEFEE-VA-FLRLLAKD 75 (172)
T ss_pred CEeEeecc-chHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccccc--CHHHHHH-HH-HHHhccCC
Confidence 47899984 421 01 23344444445557999999999999533211 1111211 11 11223447
Q ss_pred CceEEecCCCCCCC
Q 026017 109 KQWYNVLGNHDYRG 122 (244)
Q Consensus 109 iP~~~v~GNHD~~~ 122 (244)
+|++.++||||...
T Consensus 76 ~~v~~i~GNHD~~~ 89 (172)
T cd07391 76 VDVILIRGNHDGGL 89 (172)
T ss_pred CeEEEEcccCccch
Confidence 89999999999754
No 52
>PHA02239 putative protein phosphatase
Probab=98.24 E-value=3e-06 Score=70.94 Aligned_cols=70 Identities=24% Similarity=0.263 Sum_probs=44.1
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhc-CCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKL-KIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~-~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
+++++||+|+ .-..+.+.++++..+. +.|.++++||++ +.|..+ .+ .++.+........+++.++|||
T Consensus 2 ~~~~IsDIHG----~~~~l~~ll~~i~~~~~~~d~li~lGD~i-DrG~~s---~~---v~~~l~~~~~~~~~~~~l~GNH 70 (235)
T PHA02239 2 AIYVVPDIHG----EYQKLLTIMDKINNERKPEETIVFLGDYV-DRGKRS---KD---VVNYIFDLMSNDDNVVTLLGNH 70 (235)
T ss_pred eEEEEECCCC----CHHHHHHHHHHHhhcCCCCCEEEEecCcC-CCCCCh---HH---HHHHHHHHhhcCCCeEEEECCc
Confidence 6899999995 2244555666665433 359999999999 666543 11 1222111111245799999999
Q ss_pred CC
Q 026017 119 DY 120 (244)
Q Consensus 119 D~ 120 (244)
|.
T Consensus 71 E~ 72 (235)
T PHA02239 71 DD 72 (235)
T ss_pred HH
Confidence 96
No 53
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.22 E-value=5e-05 Score=62.23 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=45.0
Q ss_pred CCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHH--hhhhccCCCCCCceEEe
Q 026017 37 GSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFES--FVNIYTAPSLAKQWYNV 114 (244)
Q Consensus 37 ~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~--~~~~~~~~~l~iP~~~v 114 (244)
..+|+++++|.|.. ....+.+..+++..++|+++..||++|..=.+ ...-.+. ++. .....+|++++
T Consensus 2 ~~mkil~vtDlHg~-----~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~---~~~~~~~~~~e~---l~~~~~~v~av 70 (226)
T COG2129 2 KKMKILAVTDLHGS-----EDSLKKLLNAAADIRADLLVIAGDLTYFHFGP---KEVAEELNKLEA---LKELGIPVLAV 70 (226)
T ss_pred CcceEEEEeccccc-----hHHHHHHHHHHhhccCCEEEEecceehhhcCc---hHHHHhhhHHHH---HHhcCCeEEEE
Confidence 36799999999951 12233333344446999999999999322111 1111111 222 23458999999
Q ss_pred cCCCCCC
Q 026017 115 LGNHDYR 121 (244)
Q Consensus 115 ~GNHD~~ 121 (244)
|||-|..
T Consensus 71 pGNcD~~ 77 (226)
T COG2129 71 PGNCDPP 77 (226)
T ss_pred cCCCChH
Confidence 9998854
No 54
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.19 E-value=4.9e-06 Score=65.25 Aligned_cols=87 Identities=23% Similarity=0.287 Sum_probs=50.3
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
.|++++||+|.. .. .+...++.+....++|.++++||++ . ....+.+. ++..|++.|.|||
T Consensus 1 m~i~viSD~H~~--~~--~~~~~~~~~~~~~~~d~ii~~GD~~-~--------~~~~~~l~------~~~~~~~~V~GN~ 61 (158)
T TIGR00040 1 MKILVISDTHGP--LR--ATELPVELFNLESNVDLVIHAGDLT-S--------PFVLKEFE------DLAAKVIAVRGNN 61 (158)
T ss_pred CEEEEEecccCC--cc--hhHhHHHHHhhccCCCEEEEcCCCC-C--------HHHHHHHH------HhCCceEEEccCC
Confidence 379999999952 11 1122222222323899999999997 1 11222222 2356899999999
Q ss_pred CCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCc
Q 026017 119 DYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTT 160 (244)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~ 160 (244)
|.... . .|....+..++.++.++-..
T Consensus 62 D~~~~---~-------------~~~~~~~~~~g~~i~l~Hg~ 87 (158)
T TIGR00040 62 DGERD---E-------------LPEEEIFEAEGIDFGLVHGD 87 (158)
T ss_pred Cchhh---h-------------CCcceEEEECCEEEEEEeCc
Confidence 97411 0 02222355566777777764
No 55
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.19 E-value=3.5e-06 Score=62.46 Aligned_cols=69 Identities=23% Similarity=0.220 Sum_probs=39.1
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
+++||+|. +......... ....++.++++|+++||+++.. ... ....+.. .. .......|++.++||||
T Consensus 1 ~~~gD~h~-~~~~~~~~~~--~~~~~~~~~~~vi~~GD~~~~~-~~~-~~~~~~~-~~---~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHG-NLEALEAVLE--AALAAAEKPDFVLVLGDLVGDG-PDP-EEVLAAA-LA---LLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccC-CccchHHHHH--HHHhcccCCCEEEECCcccCCC-CCc-hHHHHHH-HH---HhhcCCCCEEEeCCCce
Confidence 47899995 2221111111 1222337899999999999543 221 1111111 11 12345899999999999
No 56
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.12 E-value=6.6e-06 Score=64.10 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=49.9
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
|++++||+|.. ...+.+.++.+ .++|.++++||++. .+... . .....|++.|+||||
T Consensus 1 ~i~~isD~H~~----~~~~~~~~~~~---~~~d~ii~~GD~~~-~~~~~----~-----------~~~~~~~~~V~GNhD 57 (155)
T cd00841 1 KIGVISDTHGS----LELLEKALELF---GDVDLIIHAGDVLY-PGPLN----E-----------LELKAPVIAVRGNCD 57 (155)
T ss_pred CEEEEecCCCC----HHHHHHHHHHh---cCCCEEEECCcccc-ccccc----h-----------hhcCCcEEEEeCCCC
Confidence 57899999952 22333333332 23999999999983 32210 0 112578999999999
Q ss_pred CCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcc
Q 026017 120 YRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTP 161 (244)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~ 161 (244)
..... . ..|....++.++.++.+.....
T Consensus 58 ~~~~~----~----------~~p~~~~~~~~g~~i~v~Hg~~ 85 (155)
T cd00841 58 GEVDF----P----------ILPEEAVLEIGGKRIFLTHGHL 85 (155)
T ss_pred CcCCc----c----------cCCceEEEEECCEEEEEECCcc
Confidence 75320 0 0122223455666777776543
No 57
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.09 E-value=5.5e-06 Score=63.21 Aligned_cols=63 Identities=22% Similarity=0.263 Sum_probs=37.7
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCc-eEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQ-WYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP-~~~v~GNH 118 (244)
|++++||+|.. . . .+. ..++|+++++||++ +.+.. .++....+.+ .+++.| ++.++|||
T Consensus 1 ~i~~isD~H~~-~-~---------~~~-~~~~D~vi~~GD~~-~~~~~----~~~~~~~~~l---~~~~~~~~~~v~GNH 60 (135)
T cd07379 1 RFVCISDTHSR-H-R---------TIS-IPDGDVLIHAGDLT-ERGTL----EELQKFLDWL---KSLPHPHKIVIAGNH 60 (135)
T ss_pred CEEEEeCCCCC-C-C---------cCc-CCCCCEEEECCCCC-CCCCH----HHHHHHHHHH---HhCCCCeEEEEECCC
Confidence 48999999952 1 1 122 26899999999998 33321 1222221111 123444 57899999
Q ss_pred CCCC
Q 026017 119 DYRG 122 (244)
Q Consensus 119 D~~~ 122 (244)
|...
T Consensus 61 D~~~ 64 (135)
T cd07379 61 DLTL 64 (135)
T ss_pred CCcC
Confidence 9753
No 58
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=98.08 E-value=8.4e-06 Score=69.83 Aligned_cols=67 Identities=21% Similarity=0.234 Sum_probs=43.7
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
+.+++||+|+ +-..+.+.++++.-+.+.|.++++||++ +.|..+ .+ .++.+. +++.+++.|.||||
T Consensus 2 ~~~vIGDIHG----~~~~l~~ll~~~~~~~~~D~li~lGDlV-drGp~s---~~---vl~~l~---~l~~~~~~VlGNHD 67 (275)
T PRK00166 2 ATYAIGDIQG----CYDELQRLLEKIDFDPAKDTLWLVGDLV-NRGPDS---LE---VLRFVK---SLGDSAVTVLGNHD 67 (275)
T ss_pred cEEEEEccCC----CHHHHHHHHHhcCCCCCCCEEEEeCCcc-CCCcCH---HH---HHHHHH---hcCCCeEEEecChh
Confidence 5789999996 2344455555543224679999999999 666533 12 222222 23557899999999
Q ss_pred C
Q 026017 120 Y 120 (244)
Q Consensus 120 ~ 120 (244)
.
T Consensus 68 ~ 68 (275)
T PRK00166 68 L 68 (275)
T ss_pred H
Confidence 6
No 59
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.07 E-value=1.1e-05 Score=65.35 Aligned_cols=59 Identities=24% Similarity=0.282 Sum_probs=39.0
Q ss_pred HHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHh---hhhccCCCC----------------CCceEEecCCCCCCC
Q 026017 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESF---VNIYTAPSL----------------AKQWYNVLGNHDYRG 122 (244)
Q Consensus 62 i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~---~~~~~~~~l----------------~iP~~~v~GNHD~~~ 122 (244)
.+.+....+||.|+++||++ +.|.. +|.+|.+.. .+++..+.. ++|++.++||||.+.
T Consensus 36 ~~~~~~~l~Pd~V~fLGDLf-d~~w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 36 VSMMQFWLKPDAVVVLGDLF-SSQWI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHhcCCCEEEEecccc-CCCcc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 34344447999999999999 55532 456676543 333311111 489999999999986
Q ss_pred C
Q 026017 123 D 123 (244)
Q Consensus 123 ~ 123 (244)
.
T Consensus 113 ~ 113 (193)
T cd08164 113 G 113 (193)
T ss_pred C
Confidence 3
No 60
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.06 E-value=7.6e-05 Score=58.96 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=32.2
Q ss_pred CCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCCCCCcccc
Q 026017 70 KIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQ 127 (244)
Q Consensus 70 ~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~~~~~~ 127 (244)
.-|.|+..||+.+.- +..++.+++.-+..+...-+.+.||||+.......
T Consensus 43 ~eDiVllpGDiSWaM--------~l~ea~~Dl~~i~~LPG~K~m~rGNHDYWw~s~sk 92 (230)
T COG1768 43 PEDIVLLPGDISWAM--------RLEEAEEDLRFIGDLPGTKYMIRGNHDYWWSSISK 92 (230)
T ss_pred hhhEEEecccchhhe--------echhhhhhhhhhhcCCCcEEEEecCCccccchHHH
Confidence 348999999998532 22233223222345677889999999998654333
No 61
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.98 E-value=1.7e-05 Score=65.09 Aligned_cols=66 Identities=26% Similarity=0.311 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
|++++||+|+ +-..+.+.++.+....++|.++++||++ +.|..+ .+.++.+. ..+++.+.||||
T Consensus 2 ri~~isDiHg----~~~~l~~~l~~~~~~~~~d~~~~~GD~v-~~g~~~------~~~~~~l~-----~~~~~~v~GNhe 65 (207)
T cd07424 2 RDFVVGDIHG----HYSLLQKALDAVGFDPARDRLISVGDLI-DRGPES------LACLELLL-----EPWFHAVRGNHE 65 (207)
T ss_pred CEEEEECCCC----CHHHHHHHHHHcCCCCCCCEEEEeCCcc-cCCCCH------HHHHHHHh-----cCCEEEeECCCh
Confidence 5899999995 2234444455443224689999999999 555322 12222221 135899999999
Q ss_pred CC
Q 026017 120 YR 121 (244)
Q Consensus 120 ~~ 121 (244)
..
T Consensus 66 ~~ 67 (207)
T cd07424 66 QM 67 (207)
T ss_pred HH
Confidence 53
No 62
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.97 E-value=2.4e-05 Score=65.08 Aligned_cols=75 Identities=19% Similarity=0.143 Sum_probs=44.4
Q ss_pred eEEEEEecCCCCCCCC------------h-HHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC
Q 026017 39 LSFLVVGDWGRRGAYN------------Q-TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP 105 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~------------q-~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~ 105 (244)
-+.++++|+|. |... + .++.+.+.++.++.+||.++++||+.+..+. . ..+.+ +..+. .
T Consensus 15 ~~~LvisDlHL-G~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~-~---~~~~~-~~~~l--~ 86 (225)
T TIGR00024 15 GDKAVIADLHL-GFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK-G---LEWRF-IREFI--E 86 (225)
T ss_pred cCeEEEEeccC-CCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC-h---HHHHH-HHHHH--H
Confidence 45789999994 4310 1 2233334344445789999999999954332 1 11221 11111 1
Q ss_pred CCCCceEEecCCCCCC
Q 026017 106 SLAKQWYNVLGNHDYR 121 (244)
Q Consensus 106 ~l~iP~~~v~GNHD~~ 121 (244)
.+..+++.++||||..
T Consensus 87 ~~~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 87 VTFRDLILIRGNHDAL 102 (225)
T ss_pred hcCCcEEEECCCCCCc
Confidence 2356999999999964
No 63
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.91 E-value=2.1e-05 Score=65.12 Aligned_cols=65 Identities=22% Similarity=0.214 Sum_probs=42.4
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
+++++||+|+ +-..+.+.++++....+.|-++++||++ +.|..+ .+ .++.+. +..++.+.||||
T Consensus 18 ri~vigDIHG----~~~~L~~lL~~i~~~~~~D~li~lGDlv-DrGp~s---~~---vl~~l~-----~~~~~~v~GNHE 81 (218)
T PRK11439 18 HIWLVGDIHG----CFEQLMRKLRHCRFDPWRDLLISVGDLI-DRGPQS---LR---CLQLLE-----EHWVRAVRGNHE 81 (218)
T ss_pred eEEEEEcccC----CHHHHHHHHHhcCCCcccCEEEEcCccc-CCCcCH---HH---HHHHHH-----cCCceEeeCchH
Confidence 7899999996 2345555666654323578999999999 677543 11 222221 123678999999
Q ss_pred C
Q 026017 120 Y 120 (244)
Q Consensus 120 ~ 120 (244)
.
T Consensus 82 ~ 82 (218)
T PRK11439 82 Q 82 (218)
T ss_pred H
Confidence 4
No 64
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.89 E-value=2.8e-05 Score=65.91 Aligned_cols=66 Identities=23% Similarity=0.268 Sum_probs=42.8
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (244)
.+|||+|+ .-..+.+.++++..+.+.|.++++||++ +.|..+ . +.++.+. +++..+..++||||..
T Consensus 2 yvIGDIHG----~~~~L~~LL~~i~~~~~~D~Li~lGDlV-dRGp~s---~---evl~~l~---~l~~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQG----CYDELQRLLEKINFDPAKDRLWLVGDLV-NRGPDS---L---ETLRFVK---SLGDSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCC----CHHHHHHHHHhcCCCCCCCEEEEecCcC-CCCcCH---H---HHHHHHH---hcCCCeEEEcCCchHH
Confidence 68999996 2344555556654334679999999999 676543 1 2222222 2235688999999963
No 65
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.86 E-value=2.4e-05 Score=64.34 Aligned_cols=72 Identities=18% Similarity=0.210 Sum_probs=42.5
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHh-------hcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhc-cCCCCCCceEE
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGE-------KLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIY-TAPSLAKQWYN 113 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~-------~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~-~~~~l~iP~~~ 113 (244)
+++||+|+ +-..+.+.++++.- ..+.|.++++||++ +.|..+ .+..+.+.++. .....+.+++.
T Consensus 1 ~vi~DIHG----~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~v-drG~~~---~~vl~~l~~l~~~~~~~~~~v~~ 72 (208)
T cd07425 1 VAIGDLHG----DLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIF-DRGPDV---IEILWLLYKLEQEAAKAGGKVHF 72 (208)
T ss_pred CEEeCccC----CHHHHHHHHHHCCCCCccccccCCCcEEEEECCCc-CCCcCH---HHHHHHHHHHHHHHHhcCCeEEE
Confidence 47999996 22334444443320 13679999999999 666432 22222222221 11223578999
Q ss_pred ecCCCCCC
Q 026017 114 VLGNHDYR 121 (244)
Q Consensus 114 v~GNHD~~ 121 (244)
++||||..
T Consensus 73 l~GNHE~~ 80 (208)
T cd07425 73 LLGNHELM 80 (208)
T ss_pred eeCCCcHH
Confidence 99999964
No 66
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.85 E-value=3.1e-05 Score=65.33 Aligned_cols=69 Identities=20% Similarity=0.198 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhh--------cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCce
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEK--------LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQW 111 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~--------~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~ 111 (244)
|+.++||+|+ .-..+.+.++++.-. .+-|-++++||++ +.|..+. +-.+.+..+. .+..+
T Consensus 2 ~~~vIGDIHG----~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDli-DRGp~S~---~vl~~~~~~~----~~~~~ 69 (245)
T PRK13625 2 KYDIIGDIHG----CYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLT-DRGPHSL---RMIEIVWELV----EKKAA 69 (245)
T ss_pred ceEEEEECcc----CHHHHHHHHHHcCCCcccCcccCCCCCEEEEECccc-CCCcChH---HHHHHHHHHh----hCCCE
Confidence 6899999996 224455555554221 1247899999999 7776542 1111111111 13479
Q ss_pred EEecCCCCC
Q 026017 112 YNVLGNHDY 120 (244)
Q Consensus 112 ~~v~GNHD~ 120 (244)
+++.||||.
T Consensus 70 ~~l~GNHE~ 78 (245)
T PRK13625 70 YYVPGNHCN 78 (245)
T ss_pred EEEeCccHH
Confidence 999999994
No 67
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=97.84 E-value=5.6e-05 Score=60.63 Aligned_cols=87 Identities=14% Similarity=0.140 Sum_probs=51.9
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
+++++||+|. +... ..+.+.+.++.++.++|.++++||++. .+..+.++. +..|++.|.||||
T Consensus 1 ~i~viSDtHl-~~~~-~~~~~~~~~~~~~~~~d~iih~GDi~~---------~~~~~~l~~------~~~~~~~V~GN~D 63 (178)
T cd07394 1 LVLVIGDLHI-PHRA-SDLPAKFKKLLVPGKIQHVLCTGNLCS---------KETYDYLKT------IAPDVHIVRGDFD 63 (178)
T ss_pred CEEEEEecCC-CCCc-hhhHHHHHHHhccCCCCEEEECCCCCC---------HHHHHHHHh------hCCceEEEECCCC
Confidence 4789999994 3322 223333444444367999999999982 111122221 2447999999999
Q ss_pred CCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCc
Q 026017 120 YRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTT 160 (244)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~ 160 (244)
.... + |....++.++.++.+.-..
T Consensus 64 ~~~~--------l---------p~~~~~~~~g~~i~l~HG~ 87 (178)
T cd07394 64 ENLN--------Y---------PETKVITVGQFKIGLIHGH 87 (178)
T ss_pred cccc--------C---------CCcEEEEECCEEEEEEECC
Confidence 7521 1 2222355667777777764
No 68
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.84 E-value=4.2e-05 Score=63.53 Aligned_cols=68 Identities=21% Similarity=0.307 Sum_probs=41.6
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhh-------cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEE
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEK-------LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYN 113 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~-------~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~ 113 (244)
+.+|||+|+ .-..+.+.++++..+ ...|.++++||++ +.|..+ .+-.+.+..+ .. +-.++.
T Consensus 1 ~~vIGDIHG----~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~I-DRGp~S---~~vl~~l~~l---~~-~~~~~~ 68 (222)
T cd07413 1 YDFIGDIHG----HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLI-DRGPEI---RELLEIVKSM---VD-AGHALA 68 (222)
T ss_pred CEEEEeccC----CHHHHHHHHHHcCCCccccccCCCCCEEEEeCccc-CCCCCH---HHHHHHHHHh---hc-CCCEEE
Confidence 468999996 234455555555321 1358999999999 777653 2222222221 11 236888
Q ss_pred ecCCCCC
Q 026017 114 VLGNHDY 120 (244)
Q Consensus 114 v~GNHD~ 120 (244)
+.||||.
T Consensus 69 l~GNHE~ 75 (222)
T cd07413 69 VMGNHEF 75 (222)
T ss_pred EEccCcH
Confidence 9999996
No 69
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.80 E-value=6.5e-05 Score=64.45 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=41.6
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhh-----cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCC-CCceEE
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEK-----LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSL-AKQWYN 113 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~-----~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l-~iP~~~ 113 (244)
+++++||+|+ +-..+.+.++.+.+. ...+.+|++||++ +.|..+ .+-.+.+.... ... ...++.
T Consensus 3 ~iyaIGDIHG----~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyV-DRGPdS---~eVld~L~~l~--~~~~~~~vv~ 72 (304)
T cd07421 3 VVICVGDIHG----YISKLNNLWLNLQSALGPSDFASALVIFLGDYC-DRGPET---RKVIDFLISLP--EKHPKQRHVF 72 (304)
T ss_pred eEEEEEeccC----CHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcC-CCCCCH---HHHHHHHHHhh--hcccccceEE
Confidence 6899999996 223444445555432 1346899999999 677543 22222222210 111 125789
Q ss_pred ecCCCCC
Q 026017 114 VLGNHDY 120 (244)
Q Consensus 114 v~GNHD~ 120 (244)
+.||||.
T Consensus 73 LrGNHE~ 79 (304)
T cd07421 73 LCGNHDF 79 (304)
T ss_pred EecCChH
Confidence 9999994
No 70
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.76 E-value=5e-05 Score=63.57 Aligned_cols=69 Identities=20% Similarity=0.245 Sum_probs=41.8
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhh---------cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCc
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEK---------LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQ 110 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~---------~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP 110 (244)
+++++||+|+ +-..+.+.++++.-. .+.|-++++||++ +.|..+ .+-.+.+..+. .+..
T Consensus 2 ~i~vigDIHG----~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlI-DrG~~s---~evl~~l~~l~----~~~~ 69 (234)
T cd07423 2 PFDIIGDVHG----CYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLV-DRGPDS---PEVLRLVMSMV----AAGA 69 (234)
T ss_pred CeEEEEECCC----CHHHHHHHHHHcCCccccCccccCCCCCEEEEECCcc-CCCCCH---HHHHHHHHHHh----hCCc
Confidence 6899999996 234455555554211 1358999999999 666543 11111112211 1235
Q ss_pred eEEecCCCCC
Q 026017 111 WYNVLGNHDY 120 (244)
Q Consensus 111 ~~~v~GNHD~ 120 (244)
++.+.||||.
T Consensus 70 ~~~v~GNHE~ 79 (234)
T cd07423 70 ALCVPGNHDN 79 (234)
T ss_pred EEEEECCcHH
Confidence 8899999996
No 71
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.76 E-value=9.4e-05 Score=58.68 Aligned_cols=69 Identities=20% Similarity=0.140 Sum_probs=40.5
Q ss_pred EEEecCCCCCCCC-----------hHHHHH-HHHHHHhh-cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC
Q 026017 42 LVVGDWGRRGAYN-----------QTKVAH-QMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (244)
Q Consensus 42 ~~igD~~~~~~~~-----------q~~v~~-~i~~i~~~-~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~ 108 (244)
.++||+|. |... .....+ .++.+.+. .++|.|+++||++. .+.. ....+.+ ..++
T Consensus 2 ~~isD~Hl-g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~-~~~~----~~~~~~l------~~~~ 69 (168)
T cd07390 2 YFTSDTHF-GHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSF-GGKA----GTELELL------SRLN 69 (168)
T ss_pred eEeccccc-CCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCC-CCCh----HHHHHHH------HhCC
Confidence 47899985 4321 012223 34455442 36899999999993 3321 1111111 2346
Q ss_pred CceEEecCCCCCCC
Q 026017 109 KQWYNVLGNHDYRG 122 (244)
Q Consensus 109 iP~~~v~GNHD~~~ 122 (244)
.|++.++||||...
T Consensus 70 ~~~~~v~GNHD~~~ 83 (168)
T cd07390 70 GRKHLIKGNHDSSL 83 (168)
T ss_pred CCeEEEeCCCCchh
Confidence 79999999999654
No 72
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=97.76 E-value=6e-05 Score=62.27 Aligned_cols=68 Identities=22% Similarity=0.220 Sum_probs=42.1
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (244)
.++||+|+ .-..+.+.++++.. .++|.++++||++ +.|..+ . +.++.+........+++.+.||||..
T Consensus 1 ~~igDiHg----~~~~l~~~l~~~~~-~~~d~li~lGD~v-drg~~~---~---~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 1 YVIGDIHG----CLDDLLRLLEKIGF-PPNDKLIFLGDYV-DRGPDS---V---EVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred CEEeCCCC----CHHHHHHHHHHhCC-CCCCEEEEECCEe-CCCCCc---H---HHHHHHHHhcCCCCcEEEEccCchhh
Confidence 37999996 22445555555443 5789999999999 566432 1 11222111111155899999999974
No 73
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.75 E-value=6.2e-05 Score=62.36 Aligned_cols=65 Identities=25% Similarity=0.328 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
|++++||+|+ +-..+.+.++++.-..+.|.++++||++ +.|..+ . +.++.+. .-.++.+.||||
T Consensus 16 ri~visDiHg----~~~~l~~~l~~~~~~~~~d~l~~lGD~v-drG~~~---~---~~l~~l~-----~~~~~~v~GNHE 79 (218)
T PRK09968 16 HIWVVGDIHG----EYQLLQSRLHQLSFCPETDLLISVGDNI-DRGPES---L---NVLRLLN-----QPWFISVKGNHE 79 (218)
T ss_pred eEEEEEeccC----CHHHHHHHHHhcCCCCCCCEEEECCCCc-CCCcCH---H---HHHHHHh-----hCCcEEEECchH
Confidence 8999999996 2334444555543224679999999999 666432 1 1222221 124689999999
Q ss_pred C
Q 026017 120 Y 120 (244)
Q Consensus 120 ~ 120 (244)
.
T Consensus 80 ~ 80 (218)
T PRK09968 80 A 80 (218)
T ss_pred H
Confidence 6
No 74
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.73 E-value=0.00018 Score=66.88 Aligned_cols=88 Identities=14% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCCCeEEEEEecCCCCCCCC--hHHHHHHHHHHHh--------hcCCCEEEEcCCcccCCCCCCcchh-----hhH---
Q 026017 34 KPDGSLSFLVVGDWGRRGAYN--QTKVAHQMGIVGE--------KLKIDFIISTGDNFYDDGLTGVDDA-----AFF--- 95 (244)
Q Consensus 34 ~~~~~~~f~~igD~~~~~~~~--q~~v~~~i~~i~~--------~~~pdfvl~~GDlvy~~G~~~~~~~-----~~~--- 95 (244)
....+.++++++|+|. |... ...+...++.+.. ..+++.++++||++...|.....+. ...
T Consensus 239 ~~~~~~~i~~ISDlHl-gs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~ 317 (504)
T PRK04036 239 TKDEKVYAVFISDVHV-GSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQY 317 (504)
T ss_pred cCCCccEEEEEcccCC-CCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHH
Confidence 3456789999999994 4422 2222333333330 2579999999999943322110000 011
Q ss_pred HHhhhhccCCCCCCceEEecCCCCCCC
Q 026017 96 ESFVNIYTAPSLAKQWYNVLGNHDYRG 122 (244)
Q Consensus 96 ~~~~~~~~~~~l~iP~~~v~GNHD~~~ 122 (244)
+.+..+...-.-.+|++.+|||||...
T Consensus 318 ~~l~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 318 EAAAEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHHHHhhhcCCeEEEecCCCcchh
Confidence 112222111112589999999999754
No 75
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=97.72 E-value=0.00018 Score=59.70 Aligned_cols=80 Identities=19% Similarity=0.174 Sum_probs=50.3
Q ss_pred CeEEEEEecCCCCCCC-------------ChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccC
Q 026017 38 SLSFLVVGDWGRRGAY-------------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTA 104 (244)
Q Consensus 38 ~~~f~~igD~~~~~~~-------------~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~ 104 (244)
.-+.++++|+|. |.. +..++.+.+.++.+..+|+-++++||+-++-+............|.....
T Consensus 19 ~~~~lVvADlHl-G~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~- 96 (235)
T COG1407 19 LGRTLVVADLHL-GYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD- 96 (235)
T ss_pred cCcEEEEEeccc-chhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-
Confidence 346799999995 421 12455666776667789999999999997655422111122223333221
Q ss_pred CCCCCceEEecCCCCCCC
Q 026017 105 PSLAKQWYNVLGNHDYRG 122 (244)
Q Consensus 105 ~~l~iP~~~v~GNHD~~~ 122 (244)
. .-+..+.||||-+.
T Consensus 97 -~--~evi~i~GNHD~~i 111 (235)
T COG1407 97 -E--REVIIIRGNHDNGI 111 (235)
T ss_pred -c--CcEEEEeccCCCcc
Confidence 1 14999999999764
No 76
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=97.65 E-value=0.00011 Score=62.88 Aligned_cols=67 Identities=22% Similarity=0.228 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
+..+|||+|+ .-..+.+.++++.-+.+.|-++++||++ +.|..+. + .++.+.. ++..+..|.||||
T Consensus 2 ~~YvIGDIHG----c~daL~~LL~~i~f~~~~D~l~~lGDlV-dRGP~sl---e---vL~~l~~---l~~~~~~VlGNHD 67 (279)
T TIGR00668 2 ATYLIGDLHG----CYDELQALLERVEFDPGQDTLWLTGDLV-ARGPGSL---E---VLRYVKS---LGDAVRLVLGNHD 67 (279)
T ss_pred cEEEEEcccC----CHHHHHHHHHHhCcCCCCCEEEEeCCcc-CCCCCHH---H---HHHHHHh---cCCCeEEEEChhH
Confidence 4689999996 2345555666654324568999999999 6775431 1 2222211 2334678999999
Q ss_pred C
Q 026017 120 Y 120 (244)
Q Consensus 120 ~ 120 (244)
.
T Consensus 68 ~ 68 (279)
T TIGR00668 68 L 68 (279)
T ss_pred H
Confidence 5
No 77
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.65 E-value=0.0015 Score=55.35 Aligned_cols=78 Identities=18% Similarity=0.145 Sum_probs=44.2
Q ss_pred eEEEEEecCCCCCCC------ChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceE
Q 026017 39 LSFLVVGDWGRRGAY------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWY 112 (244)
Q Consensus 39 ~~f~~igD~~~~~~~------~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~ 112 (244)
++++.++|+|+.-.+ .-.+++..++++.++ ++.+++.+||++ .|.+-..-..-....+. +..++..+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~--~gs~~~~~~~g~~~~~~---ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAI--QGLPISDLDKGETIIKI---MNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcC--CCchhhhhcCCcHHHHH---HHhcCCcE-
Confidence 478999999963111 124566666666554 678999999998 33321000000111111 22345555
Q ss_pred EecCCCCCCCC
Q 026017 113 NVLGNHDYRGD 123 (244)
Q Consensus 113 ~v~GNHD~~~~ 123 (244)
.++||||+...
T Consensus 74 ~~~GNHefd~G 84 (257)
T cd07408 74 VTPGNHEFDYG 84 (257)
T ss_pred EccccccccCC
Confidence 56899998754
No 78
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.64 E-value=0.00021 Score=60.12 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=40.7
Q ss_pred EEEecCCCCCCC--ChHHHHHHHHHHHhh----cCCCEEEEcCCcccCCCCCCcchh-----hh---HHHhhhhccCCCC
Q 026017 42 LVVGDWGRRGAY--NQTKVAHQMGIVGEK----LKIDFIISTGDNFYDDGLTGVDDA-----AF---FESFVNIYTAPSL 107 (244)
Q Consensus 42 ~~igD~~~~~~~--~q~~v~~~i~~i~~~----~~pdfvl~~GDlvy~~G~~~~~~~-----~~---~~~~~~~~~~~~l 107 (244)
+++||+|. +.. .+..+...++.+... .++|.++++||++...+....... .. .+.+..+...-.-
T Consensus 2 ~~iSDlHl-~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 80 (243)
T cd07386 2 VFISDVHV-GSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS 80 (243)
T ss_pred EEecccCC-CchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc
Confidence 68999995 332 122222223333321 257999999999943211000000 01 1112222110012
Q ss_pred CCceEEecCCCCCCC
Q 026017 108 AKQWYNVLGNHDYRG 122 (244)
Q Consensus 108 ~iP~~~v~GNHD~~~ 122 (244)
++|++.++||||...
T Consensus 81 ~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 HIKIIIIPGNHDAVR 95 (243)
T ss_pred CCeEEEeCCCCCccc
Confidence 599999999999864
No 79
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.62 E-value=0.0024 Score=53.72 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=44.5
Q ss_pred eEEEEEecCCCCCC-----CChHHHHHHHHHHHhhcCCC-EEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceE
Q 026017 39 LSFLVVGDWGRRGA-----YNQTKVAHQMGIVGEKLKID-FIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWY 112 (244)
Q Consensus 39 ~~f~~igD~~~~~~-----~~q~~v~~~i~~i~~~~~pd-fvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~ 112 (244)
++++.++|+|+.-. .+..++...++++.+ ..|| +++.+||++... ... +........+. +..+. .-+
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~-~~~~~l~v~~GD~~~~~-~~~-~~~~~~~~~~~---l~~~g-~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERA-ENENTLLLDAGDNFDGS-PPS-TATKGEANIEL---MNALG-YDA 73 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHh-cCCCeEEEeCCccCCCc-cch-hccCCcHHHHH---HHhcC-CCE
Confidence 58999999994211 233566677777665 4676 789999998332 211 10011111111 11223 456
Q ss_pred EecCCCCCCCC
Q 026017 113 NVLGNHDYRGD 123 (244)
Q Consensus 113 ~v~GNHD~~~~ 123 (244)
.++||||+...
T Consensus 74 ~~~GNHe~d~g 84 (252)
T cd00845 74 VTIGNHEFDYG 84 (252)
T ss_pred Eeecccccccc
Confidence 77899998754
No 80
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.61 E-value=8.3e-05 Score=61.05 Aligned_cols=78 Identities=21% Similarity=0.201 Sum_probs=40.1
Q ss_pred EEEecCCCCCCCCh--HHHHHHH-HHHHhhcCCCEEEEcCCcccCCCCCCcc--hhhhHHHhhhhccCCCCCCceEEecC
Q 026017 42 LVVGDWGRRGAYNQ--TKVAHQM-GIVGEKLKIDFIISTGDNFYDDGLTGVD--DAAFFESFVNIYTAPSLAKQWYNVLG 116 (244)
Q Consensus 42 ~~igD~~~~~~~~q--~~v~~~i-~~i~~~~~pdfvl~~GDlvy~~G~~~~~--~~~~~~~~~~~~~~~~l~iP~~~v~G 116 (244)
+++||.|. |.... ......+ .... ..+|+.++++||++ +.-..... .....+.+..+......+++++.++|
T Consensus 1 ~~iSDlHl-g~~~~~~~~~~~~~~~~~~-~~~~~~lvl~GDi~-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~G 77 (217)
T cd07398 1 LFISDLHL-GDGGPAADFLLLFLLAALA-LGEADALYLLGDIF-DLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPG 77 (217)
T ss_pred CEeeeecC-CCCCCCHHHHHHHHHhhhc-cCCCCEEEEeccEE-EEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECC
Confidence 47999995 43321 2211111 1111 25899999999999 32111100 01111111111111234789999999
Q ss_pred CCCCCC
Q 026017 117 NHDYRG 122 (244)
Q Consensus 117 NHD~~~ 122 (244)
|||...
T Consensus 78 NHD~~~ 83 (217)
T cd07398 78 NHDFLL 83 (217)
T ss_pred CchHHH
Confidence 999753
No 81
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.54 E-value=0.003 Score=53.78 Aligned_cols=73 Identities=22% Similarity=0.432 Sum_probs=48.3
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
.|++++||.= |.+...-+.+.+.++.++.++||++..||++ ..|. +.. +... +.+. .+++-++.+ |||
T Consensus 1 m~ilfiGDi~--G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~-~gG~-Gi~-~~~~---~~L~---~~GvDviT~-GNH 68 (266)
T TIGR00282 1 IKFLFIGDVY--GKAGRKIVKNNLPQLKSKYQADLVIANGENT-THGK-GLT-LKIY---EFLK---QSGVNYITM-GNH 68 (266)
T ss_pred CeEEEEEecC--CHHHHHHHHHHHHHHHHhCCCCEEEEcCccc-CCCC-CCC-HHHH---HHHH---hcCCCEEEc-cch
Confidence 3799999973 4544566777788877778899999999998 3442 111 2222 2222 235666666 999
Q ss_pred CCCCC
Q 026017 119 DYRGD 123 (244)
Q Consensus 119 D~~~~ 123 (244)
.|...
T Consensus 69 ~~Dkg 73 (266)
T TIGR00282 69 TWFQK 73 (266)
T ss_pred hccCc
Confidence 99754
No 82
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=97.46 E-value=0.0037 Score=53.51 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhCCCCEEEEEcCccccc
Q 026017 190 LLKQDVDSALKESTAKWKIVVGHHTIKS 217 (244)
Q Consensus 190 Ql~~WL~~~L~~~~~~~~iv~~H~P~~~ 217 (244)
.++ +..++|++...+.+|+++|.+...
T Consensus 171 ~~~-~~v~~lr~~~~D~IIvl~H~g~~~ 197 (277)
T cd07410 171 TAK-KYVPKLRAEGADVVVVLAHGGFER 197 (277)
T ss_pred HHH-HHHHHHHHcCCCEEEEEecCCcCC
Confidence 355 666667665688999999988654
No 83
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.44 E-value=0.004 Score=52.83 Aligned_cols=72 Identities=25% Similarity=0.445 Sum_probs=46.9
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
|++++||. .|......+.+.+.++.++.++|+++..||++. .|. +.. +... +.+ ..+++-.+ +.|||+
T Consensus 1 ~ilfigdi--~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~-gg~-gl~-~~~~---~~L---~~~G~D~i-TlGNH~ 68 (255)
T cd07382 1 KILFIGDI--VGKPGRKAVKEHLPKLKKEYKIDFVIANGENAA-GGK-GIT-PKIA---KEL---LSAGVDVI-TMGNHT 68 (255)
T ss_pred CEEEEEeC--CCHHHHHHHHHHHHHHHHHCCCCEEEECCcccc-CCC-CCC-HHHH---HHH---HhcCCCEE-Eecccc
Confidence 58999997 355556677788888777688999999999983 332 111 1111 222 22345544 559999
Q ss_pred CCCC
Q 026017 120 YRGD 123 (244)
Q Consensus 120 ~~~~ 123 (244)
|...
T Consensus 69 fD~g 72 (255)
T cd07382 69 WDKK 72 (255)
T ss_pred cCcc
Confidence 9765
No 84
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=97.38 E-value=0.004 Score=52.82 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCC--CC----hHHHHHHHHHHHhhcCCC-EEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCce
Q 026017 39 LSFLVVGDWGRRGA--YN----QTKVAHQMGIVGEKLKID-FIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQW 111 (244)
Q Consensus 39 ~~f~~igD~~~~~~--~~----q~~v~~~i~~i~~~~~pd-fvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~ 111 (244)
++++.+.|+|...+ .. -.++...++++.+ .+|+ +++.+||++... ..+.. .+-...++. +..++. -
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~-~~~~~l~l~~GD~~~g~-~~~~~-~~g~~~~~~---l~~l~~-d 73 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRK-ENPNTLVLFSGDVLSPS-LLSTA-TKGKQMVPV---LNALGV-D 73 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHh-cCCCEEEEECCCccCCc-cchhh-cCCccHHHH---HHhcCC-c
Confidence 47888999883211 11 2566667776655 4676 899999998322 11100 000111111 122333 3
Q ss_pred EEecCCCCCCCC
Q 026017 112 YNVLGNHDYRGD 123 (244)
Q Consensus 112 ~~v~GNHD~~~~ 123 (244)
+.++||||+..+
T Consensus 74 ~~~~GNHefd~g 85 (257)
T cd07406 74 LACFGNHEFDFG 85 (257)
T ss_pred EEeecccccccC
Confidence 668999999654
No 85
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.37 E-value=0.00033 Score=53.08 Aligned_cols=55 Identities=31% Similarity=0.375 Sum_probs=33.5
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHh-hcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGE-KLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~-~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (244)
+++||+|. . . . .+.++.. ..++|.++++||+. . . ....+.++ ...|++.+.||||
T Consensus 1 ~viSDtH~-~-~---~---~~~~~~~~~~~~d~ii~~GD~~-~--------~-~~~~~~~~-----~~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTES-P-A---L---YSPEIKVRLEGVDLILSAGDLP-K--------E-YLEYLVTM-----LNVPVYYVHGNHD 56 (129)
T ss_pred CeeccccC-c-c---c---cchHHHhhCCCCCEEEECCCCC-h--------H-HHHHHHHH-----cCCCEEEEeCCCc
Confidence 47999994 2 1 1 2222222 36899999999975 1 1 11222221 2568999999999
No 86
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.37 E-value=0.00068 Score=54.02 Aligned_cols=90 Identities=18% Similarity=0.214 Sum_probs=53.3
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
.+++++||+|.. .....++.. +....++|+|+++||.+.. . .. ..++. .+..+++.|.||.
T Consensus 2 m~ilviSDtH~~----~~~~~~~~~-~~~~~~~d~vih~GD~~~~-~-----~~---~~l~~-----~~~~~i~~V~GN~ 62 (172)
T COG0622 2 MKILVISDTHGP----LRAIEKALK-IFNLEKVDAVIHAGDSTSP-F-----TL---DALEG-----GLAAKLIAVRGNC 62 (172)
T ss_pred cEEEEEeccCCC----hhhhhHHHH-HhhhcCCCEEEECCCcCCc-c-----ch---HHhhc-----ccccceEEEEccC
Confidence 479999999962 111222222 2233799999999999932 1 11 11111 1467899999999
Q ss_pred CCCCCccccccccccCCCCceeeeeeEEEcCceEEEEEEeCcc
Q 026017 119 DYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTP 161 (244)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~~~~p~~Ysf~~~~~~fi~LDs~~ 161 (244)
|..... ... |..-.+..++++|.++-...
T Consensus 63 D~~~~~-~~~-------------p~~~~~~~~g~ki~l~HGh~ 91 (172)
T COG0622 63 DGEVDQ-EEL-------------PEELVLEVGGVKIFLTHGHL 91 (172)
T ss_pred CCcccc-ccC-------------ChhHeEEECCEEEEEECCCc
Confidence 986421 000 11112566788888887643
No 87
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.32 E-value=0.014 Score=50.34 Aligned_cols=24 Identities=17% Similarity=0.375 Sum_probs=19.4
Q ss_pred HHHHHHhhCCCCEEEEEcCccccc
Q 026017 194 DVDSALKESTAKWKIVVGHHTIKS 217 (244)
Q Consensus 194 WL~~~L~~~~~~~~iv~~H~P~~~ 217 (244)
|+.+.|++...+.+|+++|...-.
T Consensus 178 ~v~~~l~~~~~DvIIvlsH~G~~~ 201 (282)
T cd07407 178 WFQDAINNEDVDLILVLGHMPVRD 201 (282)
T ss_pred HHHHHHHhcCCCEEEEEeCCCCCC
Confidence 888888756788999999988643
No 88
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.28 E-value=0.011 Score=50.28 Aligned_cols=44 Identities=14% Similarity=0.221 Sum_probs=26.8
Q ss_pred eEEEEEecCCCCCCC--------------Ch----HHHHHHHHHHHhhcCCCEE-EEcCCccc
Q 026017 39 LSFLVVGDWGRRGAY--------------NQ----TKVAHQMGIVGEKLKIDFI-ISTGDNFY 82 (244)
Q Consensus 39 ~~f~~igD~~~~~~~--------------~q----~~v~~~i~~i~~~~~pdfv-l~~GDlvy 82 (244)
++|+.++|+|+.-.+ .+ .++...++++.++..++.+ +.+||++.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~ 63 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQ 63 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccC
Confidence 478899999863100 01 3444555555542278876 67999983
No 89
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=97.22 E-value=0.00074 Score=59.04 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GNH 118 (244)
+++++||+|+ +-..+.+.++......+.+-.+++||++ +.|..+.+ .+.-++.+. ..+--++.+.|||
T Consensus 52 ~~~vvGDiHG----~~~dL~~il~~~g~~~~~~~~lFLGDyV-DRG~~s~E------vl~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHG----KLDDLFLIFYKNGLPSPENPYVFNGDFV-DRGKRSIE------ILIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCC----CHHHHHHHHHHcCCCCccceEEEecccc-CCCCCcHH------HHHHHHHHhhcCCCcEEEecCch
Confidence 5799999996 2234455444321101226799999999 77765421 111121111 1234589999999
Q ss_pred CCC
Q 026017 119 DYR 121 (244)
Q Consensus 119 D~~ 121 (244)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 974
No 90
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.10 E-value=0.00064 Score=56.31 Aligned_cols=76 Identities=21% Similarity=0.297 Sum_probs=40.9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHhhc--CCCEEEEcCCcccCCCCCCcch-hhhHH-HhhhhccCCCCCCceEEecCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKL--KIDFIISTGDNFYDDGLTGVDD-AAFFE-SFVNIYTAPSLAKQWYNVLGN 117 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~~~--~pdfvl~~GDlvy~~G~~~~~~-~~~~~-~~~~~~~~~~l~iP~~~v~GN 117 (244)
++|||.|. ++.. ......+.+..+.. +.|.+.++||++ ++..+.+. .+..+ ...++.....-+.|+|.++||
T Consensus 1 lFISDlHL-~~~~-p~~t~~fl~Fl~~~a~~ad~lyilGDif--d~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN 76 (237)
T COG2908 1 LFISDLHL-GPKR-PALTAFFLDFLREEAAQADALYILGDIF--DGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGN 76 (237)
T ss_pred Ceeecccc-CCCC-cHHHHHHHHHHHhccccCcEEEEechhh--hhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCc
Confidence 47899995 4322 22222222222223 559999999998 44433221 11111 112222222336999999999
Q ss_pred CCCC
Q 026017 118 HDYR 121 (244)
Q Consensus 118 HD~~ 121 (244)
||.-
T Consensus 77 ~Dfl 80 (237)
T COG2908 77 HDFL 80 (237)
T ss_pred hHHH
Confidence 9964
No 91
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=97.06 E-value=0.0015 Score=55.94 Aligned_cols=70 Identities=19% Similarity=0.227 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccC-CCCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTA-PSLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~-~~l~iP~~~v~GNH 118 (244)
+++++||+|+ +-..+.+.++.... ...+-++++||++ +.|..+. +.+..++.. ...+-.++.+.|||
T Consensus 29 ~i~vvGDiHG----~~~~l~~ll~~~~~-~~~~~~vfLGD~V-DrG~~s~------e~l~~l~~lk~~~p~~v~llrGNH 96 (271)
T smart00156 29 PVTVCGDIHG----QFDDLLRLFDLNGP-PPDTNYVFLGDYV-DRGPFSI------EVILLLFALKILYPNRVVLLRGNH 96 (271)
T ss_pred CEEEEEeCcC----CHHHHHHHHHHcCC-CCCceEEEeCCcc-CCCCChH------HHHHHHHHHHhcCCCCEEEEeccc
Confidence 4899999996 22344444444322 3457899999999 7776532 111111111 11234589999999
Q ss_pred CCC
Q 026017 119 DYR 121 (244)
Q Consensus 119 D~~ 121 (244)
|..
T Consensus 97 E~~ 99 (271)
T smart00156 97 ESR 99 (271)
T ss_pred cHH
Confidence 974
No 92
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=96.96 E-value=0.002 Score=56.06 Aligned_cols=70 Identities=20% Similarity=0.290 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GNH 118 (244)
+++++||+|+ +-..+.+.++.... ...+-++++||.+ +.|..+. +.+..++... ....-++.+.|||
T Consensus 44 ~i~ViGDIHG----~~~dL~~l~~~~g~-~~~~~ylFLGDyV-DRG~~s~------Evi~lL~~lki~~p~~v~lLRGNH 111 (305)
T cd07416 44 PVTVCGDIHG----QFYDLLKLFEVGGS-PANTRYLFLGDYV-DRGYFSI------ECVLYLWALKILYPKTLFLLRGNH 111 (305)
T ss_pred CEEEEEeCCC----CHHHHHHHHHhcCC-CCCceEEEECCcc-CCCCChH------HHHHHHHHHHhhcCCCEEEEeCCC
Confidence 4899999996 22344444443221 2347899999999 6775432 2222221111 1234589999999
Q ss_pred CCC
Q 026017 119 DYR 121 (244)
Q Consensus 119 D~~ 121 (244)
|..
T Consensus 112 E~~ 114 (305)
T cd07416 112 ECR 114 (305)
T ss_pred cHH
Confidence 964
No 93
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=96.95 E-value=0.043 Score=45.72 Aligned_cols=72 Identities=26% Similarity=0.523 Sum_probs=48.4
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
.|++++||. .|......+.+.+..+.++.++|||+..|-++ ..|- +-.. +.++.+.. .++- +.+.|||
T Consensus 1 mriLfiGDv--vGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENa-a~G~-Git~----k~y~~l~~---~G~d-viT~GNH 68 (266)
T COG1692 1 MRILFIGDV--VGKPGRKAVKEHLPQLKSKYKIDFVIVNGENA-AGGF-GITE----KIYKELLE---AGAD-VITLGNH 68 (266)
T ss_pred CeEEEEecc--cCcchHHHHHHHhHHHHHhhcCcEEEEcCccc-cCCc-CCCH----HHHHHHHH---hCCC-EEecccc
Confidence 489999997 35666677788888887778999999999998 4432 2111 12222221 1232 5789999
Q ss_pred CCCC
Q 026017 119 DYRG 122 (244)
Q Consensus 119 D~~~ 122 (244)
=|..
T Consensus 69 ~wd~ 72 (266)
T COG1692 69 TWDQ 72 (266)
T ss_pred cccc
Confidence 9874
No 94
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=96.91 E-value=0.0021 Score=57.25 Aligned_cols=71 Identities=27% Similarity=0.373 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCC-CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLG 116 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~p-dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~G 116 (244)
-++.++||+|+ .-..+.+.++.... ... +.++++||++ +.|..+. +.+..++... ...--++.+.|
T Consensus 66 ~~i~VvGDIHG----~~~dL~~ll~~~g~-~~~~~~ylFLGDyV-DRGp~Sl------Evl~lL~~lki~~p~~v~lLRG 133 (377)
T cd07418 66 CEVVVVGDVHG----QLHDVLFLLEDAGF-PDQNRFYVFNGDYV-DRGAWGL------ETFLLLLSWKVLLPDRVYLLRG 133 (377)
T ss_pred CCEEEEEecCC----CHHHHHHHHHHhCC-CCCCceEEEecccc-CCCCChH------HHHHHHHHHhhccCCeEEEEee
Confidence 35899999996 22344444443221 223 4599999999 7776542 1221111111 12345899999
Q ss_pred CCCCC
Q 026017 117 NHDYR 121 (244)
Q Consensus 117 NHD~~ 121 (244)
|||..
T Consensus 134 NHE~~ 138 (377)
T cd07418 134 NHESK 138 (377)
T ss_pred ecccc
Confidence 99974
No 95
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.90 E-value=0.0035 Score=48.83 Aligned_cols=66 Identities=24% Similarity=0.324 Sum_probs=42.0
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHhh-cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhcc-CCCCCCceEEecCCCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-APSLAKQWYNVLGNHD 119 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~~-~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~-~~~l~iP~~~v~GNHD 119 (244)
+++||.++ +-.++.+.++++.++ .+.|++|.+||+.-.. .++. .|...+. .....+|.|.+-|||+
T Consensus 1 LV~G~~~G----~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~----~~~~----~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNG----RLKALFEKVNTINKKKGPFDALLCVGDFFGDD----EDDE----ELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCc----cHHHHHHHHHHHhcccCCeeEEEEecCccCCc----cchh----hHHHHhcCCccCCCCEEEECCCCC
Confidence 47889875 235566666665443 4569999999998221 1112 2333332 2356799999999998
No 96
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.82 E-value=0.0052 Score=47.64 Aligned_cols=72 Identities=18% Similarity=0.090 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCC---------ChHHHHHHH-HHHHhhcCC-CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC
Q 026017 40 SFLVVGDWGRRGAY---------NQTKVAHQM-GIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (244)
Q Consensus 40 ~f~~igD~~~~~~~---------~q~~v~~~i-~~i~~~~~p-dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~ 108 (244)
.+.++||+|. +.. +-++..+++ ...++..+| |.+.++||++... +++ .....+ ++.++
T Consensus 5 mmyfisDtHf-gh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~-----n~~---~~a~~I--lerLn 73 (186)
T COG4186 5 MMYFISDTHF-GHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGA-----NRE---RAAGLI--LERLN 73 (186)
T ss_pred EEEEeccccc-CCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEeccccccc-----chh---hHHHHH--HHHcC
Confidence 4678999995 422 123333333 345555666 8999999998321 211 122222 23456
Q ss_pred CceEEecCCCCCCC
Q 026017 109 KQWYNVLGNHDYRG 122 (244)
Q Consensus 109 iP~~~v~GNHD~~~ 122 (244)
.-...|+||||-..
T Consensus 74 Grkhlv~GNhDk~~ 87 (186)
T COG4186 74 GRKHLVPGNHDKCH 87 (186)
T ss_pred CcEEEeeCCCCCCc
Confidence 66799999999654
No 97
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.82 E-value=0.0069 Score=55.55 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=35.1
Q ss_pred CCCeEEEEEecCCCCCCCC--------hHHHHHHHHHHHhhcCCCEEEEcCCcccCCC
Q 026017 36 DGSLSFLVVGDWGRRGAYN--------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDG 85 (244)
Q Consensus 36 ~~~~~f~~igD~~~~~~~~--------q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G 85 (244)
.+.+|+++..|.|. |.-. .....+-+-.||++.+.|+|+..||+++++-
T Consensus 11 entirILVaTD~Hl-GY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHL-GYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCcc-ccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 67899999999994 4311 1222334445777789999999999997653
No 98
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=96.77 E-value=0.0031 Score=54.55 Aligned_cols=70 Identities=16% Similarity=0.227 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GNH 118 (244)
.++++||+|+ +-..+.+.++.... ...+-++++||++ +.|..+. +.+..++... ..+-.++.+.|||
T Consensus 51 ~i~viGDIHG----~~~~L~~l~~~~~~-~~~~~~lfLGDyV-DRG~~s~------e~i~ll~~lk~~~p~~i~llrGNH 118 (293)
T cd07414 51 PLKICGDIHG----QYYDLLRLFEYGGF-PPESNYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGNH 118 (293)
T ss_pred ceEEEEecCC----CHHHHHHHHHhcCC-CCcceEEEEeeEe-cCCCCcH------HHHHHHHHhhhhCCCcEEEEeccc
Confidence 4899999996 22344444444322 3446789999999 7775542 1111111111 1133489999999
Q ss_pred CCC
Q 026017 119 DYR 121 (244)
Q Consensus 119 D~~ 121 (244)
|..
T Consensus 119 E~~ 121 (293)
T cd07414 119 ECA 121 (293)
T ss_pred chh
Confidence 974
No 99
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=96.73 E-value=0.0028 Score=54.60 Aligned_cols=70 Identities=21% Similarity=0.268 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GNH 118 (244)
.+.++||+|+ +-..+.+.+..... ...+-++++||.+ +.|..+. +.+..++.+. ..+-.++.+.|||
T Consensus 43 ~i~vvGDIHG----~~~dL~~ll~~~~~-~~~~~~lfLGDyV-DRG~~s~------evl~ll~~lk~~~p~~v~llrGNH 110 (285)
T cd07415 43 PVTVCGDIHG----QFYDLLELFRVGGD-PPDTNYLFLGDYV-DRGYYSV------ETFLLLLALKVRYPDRITLLRGNH 110 (285)
T ss_pred CEEEEEeCCC----CHHHHHHHHHHcCC-CCCCeEEEEeEEC-CCCcCHH------HHHHHHHHHhhcCCCcEEEEeccc
Confidence 3899999996 22344444443221 2346799999999 6775431 1221111111 2245689999999
Q ss_pred CCC
Q 026017 119 DYR 121 (244)
Q Consensus 119 D~~ 121 (244)
|..
T Consensus 111 E~~ 113 (285)
T cd07415 111 ESR 113 (285)
T ss_pred chH
Confidence 964
No 100
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=96.73 E-value=0.003 Score=55.20 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGN 117 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GN 117 (244)
-++.++||+|+ .-..+.+.+.......+-+-++++||++ +.|..+. +.+..++.+. ...--++.+.||
T Consensus 60 ~~~~VvGDIHG----~~~dL~~ll~~~g~~~~~~~ylFLGDyV-DRG~~S~------Evl~ll~~lki~~p~~v~lLRGN 128 (316)
T cd07417 60 EKITVCGDTHG----QFYDLLNIFELNGLPSETNPYLFNGDFV-DRGSFSV------EVILTLFAFKLLYPNHFHLNRGN 128 (316)
T ss_pred ceeEEeecccC----CHHHHHHHHHhcCCCCccCeEEEEeeEe-cCCCChH------HHHHHHHHhhhccCCceEEEeec
Confidence 36899999996 2234444444322111225799999999 7776542 2222221111 123457899999
Q ss_pred CCCC
Q 026017 118 HDYR 121 (244)
Q Consensus 118 HD~~ 121 (244)
||..
T Consensus 129 HE~~ 132 (316)
T cd07417 129 HETD 132 (316)
T ss_pred cchH
Confidence 9963
No 101
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=96.64 E-value=0.0032 Score=54.46 Aligned_cols=69 Identities=19% Similarity=0.227 Sum_probs=40.4
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCCCC
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNHD 119 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GNHD 119 (244)
+.++||+|+ +-..+.+.++++.. ...+-++++||++ +.|..+. +.+..++... ..+-.++.+.||||
T Consensus 54 ~~ViGDIHG----~~~~L~~l~~~~~~-~~~~~~lfLGDyV-DRG~~s~------evl~ll~~lk~~~p~~v~llrGNHE 121 (294)
T PTZ00244 54 VRVCGDTHG----QYYDLLRIFEKCGF-PPYSNYLFLGDYV-DRGKHSV------ETITLQFCYKIVYPENFFLLRGNHE 121 (294)
T ss_pred ceeeccCCC----CHHHHHHHHHHcCC-CCcccEEEeeeEe-cCCCCHH------HHHHHHHHHhhccCCeEEEEecccc
Confidence 689999996 22344444544322 2335688999999 7775431 2222111111 12446899999999
Q ss_pred CC
Q 026017 120 YR 121 (244)
Q Consensus 120 ~~ 121 (244)
..
T Consensus 122 ~~ 123 (294)
T PTZ00244 122 CA 123 (294)
T ss_pred hH
Confidence 63
No 102
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=96.57 E-value=0.17 Score=47.34 Aligned_cols=87 Identities=16% Similarity=0.124 Sum_probs=48.7
Q ss_pred CCCCCCCeEEEEEecCCCCCC---C--------ChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhh
Q 026017 32 PAKPDGSLSFLVVGDWGRRGA---Y--------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVN 100 (244)
Q Consensus 32 p~~~~~~~~f~~igD~~~~~~---~--------~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~ 100 (244)
......+++|+...|+|+.-. + ...+++..++++.++.+..++|.+||++..+.. ........... .
T Consensus 20 ~~~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l-~~~~~~g~~~~-~ 97 (517)
T COG0737 20 AAAETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPL-SDYLTKGEPTV-D 97 (517)
T ss_pred cccCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccc-cccccCCChHH-H
Confidence 345578999999999996211 0 113444555555554556789999999933222 21111111111 1
Q ss_pred hccCCCCCCceEEecCCCCCCCC
Q 026017 101 IYTAPSLAKQWYNVLGNHDYRGD 123 (244)
Q Consensus 101 ~~~~~~l~iP~~~v~GNHD~~~~ 123 (244)
+. .. -..=+.+.||||+...
T Consensus 98 ~m--N~-m~yDa~tiGNHEFd~g 117 (517)
T COG0737 98 LL--NA-LGYDAMTLGNHEFDYG 117 (517)
T ss_pred HH--hh-cCCcEEeecccccccC
Confidence 11 11 1234678999999865
No 103
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=96.55 E-value=0.005 Score=53.83 Aligned_cols=70 Identities=16% Similarity=0.228 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GNH 118 (244)
.++++||+|+ +-..+.+.+..... ...+-.+++||++ +.|..+. +.+..++... ...-.++.+.|||
T Consensus 60 ~i~vvGDIHG----~~~dL~~l~~~~g~-~~~~~ylfLGDyV-DRG~~s~------evl~ll~~lki~~p~~v~llRGNH 127 (320)
T PTZ00480 60 PLKICGDVHG----QYFDLLRLFEYGGY-PPESNYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGNH 127 (320)
T ss_pred CeEEEeeccc----CHHHHHHHHHhcCC-CCcceEEEeceec-CCCCCcH------HHHHHHHHhcccCCCceEEEeccc
Confidence 4899999995 22344444443221 2346788999999 6775431 2222221111 1234589999999
Q ss_pred CCC
Q 026017 119 DYR 121 (244)
Q Consensus 119 D~~ 121 (244)
|..
T Consensus 128 E~~ 130 (320)
T PTZ00480 128 ECA 130 (320)
T ss_pred chh
Confidence 974
No 104
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=96.49 E-value=0.0059 Score=53.09 Aligned_cols=69 Identities=22% Similarity=0.222 Sum_probs=40.4
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCCCC
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNHD 119 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GNHD 119 (244)
+.++||+|+ +-..+.+.++.... ...+-++++||.+ +.|..+. +.+..++... ...--++.+.||||
T Consensus 45 i~vvGDIHG----~~~~L~~l~~~~~~-~~~~~~lfLGDyV-DRG~~s~------evl~ll~~lk~~~p~~v~llrGNHE 112 (303)
T PTZ00239 45 VNVCGDIHG----QFYDLQALFKEGGD-IPNANYIFIGDFV-DRGYNSV------ETMEYLLCLKVKYPGNITLLRGNHE 112 (303)
T ss_pred EEEEEeCCC----CHHHHHHHHHhcCC-CCCceEEEeeeEc-CCCCCHH------HHHHHHHHhhhcCCCcEEEEecccc
Confidence 789999996 22344444443222 2346799999999 6775431 1222221111 12335899999999
Q ss_pred CC
Q 026017 120 YR 121 (244)
Q Consensus 120 ~~ 121 (244)
..
T Consensus 113 ~~ 114 (303)
T PTZ00239 113 SR 114 (303)
T ss_pred hH
Confidence 63
No 105
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=96.31 E-value=0.023 Score=53.61 Aligned_cols=83 Identities=14% Similarity=0.130 Sum_probs=44.6
Q ss_pred CCCCeEEEEEecCCCCCC---C---ChHHHHHHHHHHHhh----cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccC
Q 026017 35 PDGSLSFLVVGDWGRRGA---Y---NQTKVAHQMGIVGEK----LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTA 104 (244)
Q Consensus 35 ~~~~~~f~~igD~~~~~~---~---~q~~v~~~i~~i~~~----~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~ 104 (244)
....++++.++|+|+.-. + .-.+++..++++.++ .+.-+++..||.+ .|.+-.+-..-....+. +
T Consensus 31 ~~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~--~Gs~~s~~~~g~~~i~~---m 105 (551)
T PRK09558 31 KTYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDIN--TGVPESDLQDAEPDFRG---M 105 (551)
T ss_pred CceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccc--cceEhhhhcCCchhHHH---H
Confidence 456899999999996311 1 124455555554321 2346799999988 34321000000011111 2
Q ss_pred CCCCCceEEecCCCCCCCC
Q 026017 105 PSLAKQWYNVLGNHDYRGD 123 (244)
Q Consensus 105 ~~l~iP~~~v~GNHD~~~~ 123 (244)
..++.-+ .++||||+...
T Consensus 106 N~~g~Da-~tlGNHEFD~G 123 (551)
T PRK09558 106 NLIGYDA-MAVGNHEFDNP 123 (551)
T ss_pred hcCCCCE-EcccccccCcC
Confidence 2344444 45699999865
No 106
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.16 E-value=0.019 Score=58.82 Aligned_cols=81 Identities=16% Similarity=0.159 Sum_probs=46.8
Q ss_pred CCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEE-cCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEE
Q 026017 35 PDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIIS-TGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYN 113 (244)
Q Consensus 35 ~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~-~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~ 113 (244)
....++++.++|+|+. -.+..+++..++++.+ .+|+.++. +||++ .|..-.+..+.....+. +..++ .-+.
T Consensus 657 ~~~~l~Il~~nD~Hg~-l~g~~r~~~~i~~~r~-~~~~~l~ld~GD~~--~gs~~~~~~~g~~~~~~---ln~lg-~d~~ 728 (1163)
T PRK09419 657 DNWELTILHTNDFHGH-LDGAAKRVTKIKEVKE-ENPNTILVDAGDVY--QGSLYSNLLKGLPVLKM---MKEMG-YDAS 728 (1163)
T ss_pred CceEEEEEEEeecccC-CCCHHHHHHHHHHHHh-hCCCeEEEecCCCC--CCcchhhhcCChHHHHH---HhCcC-CCEE
Confidence 4456999999999942 1234566777777655 56777655 99998 33321110111112222 12223 2356
Q ss_pred ecCCCCCCCC
Q 026017 114 VLGNHDYRGD 123 (244)
Q Consensus 114 v~GNHD~~~~ 123 (244)
++||||+...
T Consensus 729 ~~GNHEfd~g 738 (1163)
T PRK09419 729 TFGNHEFDWG 738 (1163)
T ss_pred EecccccccC
Confidence 9999998754
No 107
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=96.12 E-value=0.18 Score=43.35 Aligned_cols=78 Identities=19% Similarity=0.143 Sum_probs=41.3
Q ss_pred eEEEEEecCCCCCC---C--------------ChHHHHHHHHHHHhhcCCC-EEEEcCCcccCCCCCCcchhhhHHHhhh
Q 026017 39 LSFLVVGDWGRRGA---Y--------------NQTKVAHQMGIVGEKLKID-FIISTGDNFYDDGLTGVDDAAFFESFVN 100 (244)
Q Consensus 39 ~~f~~igD~~~~~~---~--------------~q~~v~~~i~~i~~~~~pd-fvl~~GDlvy~~G~~~~~~~~~~~~~~~ 100 (244)
++++.++|+|+.-. + .-.+++..++++.+ ..++ +++.+||++. |..-.+-.+-....+.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~-~~~~~l~ld~GD~~~--gs~~~~~~~g~~~~~~ 77 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRA-ENPNVLFLNAGDAFQ--GTLWYTLYKGNADAEF 77 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHh-cCCCEEEEeCCCCCC--CcchhhhcCChHHHHH
Confidence 47899999986210 0 01445555666544 3565 6777999983 3321110001111111
Q ss_pred hccCCCCCCceEEecCCCCCCCC
Q 026017 101 IYTAPSLAKQWYNVLGNHDYRGD 123 (244)
Q Consensus 101 ~~~~~~l~iP~~~v~GNHD~~~~ 123 (244)
+..++.. +.++||||+...
T Consensus 78 ---ln~~g~D-~~~lGNHefd~G 96 (281)
T cd07409 78 ---MNLLGYD-AMTLGNHEFDDG 96 (281)
T ss_pred ---HHhcCCC-EEEeccccccCC
Confidence 2234555 446799999764
No 108
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=96.08 E-value=0.016 Score=50.70 Aligned_cols=70 Identities=19% Similarity=0.205 Sum_probs=38.8
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhhc---CC----CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceE
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKL---KI----DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWY 112 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~~---~p----dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~ 112 (244)
+.++||+|+ +-..+.+.++.+.... .. .-++++||++ +.|..+. +.+..++.+. ..+--++
T Consensus 50 ~~viGDIHG----~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyV-DRGp~s~------evl~ll~~lk~~~p~~v~ 118 (311)
T cd07419 50 IKIFGDIHG----QFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYV-DRGSNSL------ETICLLLALKVKYPNQIH 118 (311)
T ss_pred EEEEEeccC----CHHHHHHHHHHcCCCcccccCCCcCceEEEECCcc-CCCCChH------HHHHHHHHhhhcCCCcEE
Confidence 788999995 2234444444321100 01 2378999999 7775432 2222221111 1245689
Q ss_pred EecCCCCCC
Q 026017 113 NVLGNHDYR 121 (244)
Q Consensus 113 ~v~GNHD~~ 121 (244)
.+.||||..
T Consensus 119 lLRGNHE~~ 127 (311)
T cd07419 119 LIRGNHEDR 127 (311)
T ss_pred EeccccchH
Confidence 999999963
No 109
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=96.07 E-value=0.15 Score=44.86 Aligned_cols=167 Identities=16% Similarity=0.222 Sum_probs=88.2
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhh--cCCCEEEEcCCcccCCCCCCcch-------hhhH--HHhhhhccC-CCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEK--LKIDFIISTGDNFYDDGLTGVDD-------AAFF--ESFVNIYTA-PSL 107 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~--~~pdfvl~~GDlvy~~G~~~~~~-------~~~~--~~~~~~~~~-~~l 107 (244)
|++|-|=.|+ .-..+.+++..+.+. .+.|+++..||+---. .+.| +.+. ..|-..|+. ...
T Consensus 2 rIaVqGCcHG----~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavR---n~~D~~siavPpKy~~m~~F~~YYsge~~A 74 (456)
T KOG2863|consen 2 RIAVQGCCHG----ELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVR---NEQDLKSIAVPPKYRRMGDFYKYYSGEIKA 74 (456)
T ss_pred ceeeecccch----hHHHHHHHHHHHHHcCCCCccEEEEccchHhhc---chhhcccccCCHHHHHHHHHHHHhCCcccC
Confidence 5667776664 124566676655553 4789999999985211 1111 1111 123344432 245
Q ss_pred CCceEEecCCCCCCCCccccccccccCCCCceeeeeeEE------EcCceEEEEEEeCcccccccccCCCCCcCCCCCCC
Q 026017 108 AKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFI------VNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQ 181 (244)
Q Consensus 108 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~Ys------f~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~ 181 (244)
++|.+.+=||||..... ..+- +.-|..|.-|+ ++++++++-+|-...-..+|.+. +..|-.+.
T Consensus 75 PVlTIFIGGNHEAsnyL-~eLp------yGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kg----h~E~ppyn 143 (456)
T KOG2863|consen 75 PVLTIFIGGNHEASNYL-QELP------YGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKG----HFEWPPYN 143 (456)
T ss_pred ceeEEEecCchHHHHHH-Hhcc------cCceeccceEEeeecceEEECCEEEeeccchhhhhhcccC----CCCCCCcc
Confidence 78999999999976432 1121 34566665332 66789999998776544444332 12221111
Q ss_pred c---chHHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccCCCCCChHhH
Q 026017 182 P---RKSYLANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHEL 227 (244)
Q Consensus 182 ~---~~~~~~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~~g~~~~l 227 (244)
. +.-+--.+.+ -..|.+-+.+-=|..+|-=+-.-..||+...|
T Consensus 144 ~stiRsiYHvR~~d---V~~Lkqlk~piDIfLSHDWP~GI~~yGd~~~L 189 (456)
T KOG2863|consen 144 NSTIRSIYHVRISD---VAKLKQLKHPIDIFLSHDWPRGIYYYGDKKQL 189 (456)
T ss_pred chhhhhhhhhhhhh---hHHHHhhcCcceEEeecCCCcchhhcCCHHHH
Confidence 0 0111112222 12233334555677888655554567875443
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=95.95 E-value=0.28 Score=42.24 Aligned_cols=79 Identities=15% Similarity=0.121 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCC-CC-----ChHHHHHHHHHHHhh----cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC
Q 026017 39 LSFLVVGDWGRRG-AY-----NQTKVAHQMGIVGEK----LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (244)
Q Consensus 39 ~~f~~igD~~~~~-~~-----~q~~v~~~i~~i~~~----~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~ 108 (244)
++++.++|+|+.= .. .-.+++..++++.++ .+.-+++..||++ .|.+-.+-.+.....+. +..++
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~--~Gs~~~~~~~g~~~~~~---~n~~g 75 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDIN--TGVPESDLQDAEPDFRG---MNLVG 75 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcC--CCchhHHhcCcchHHHH---HHhhC
Confidence 4789999999631 11 113455555554332 2336899999988 44331100000111111 12334
Q ss_pred CceEEecCCCCCCCC
Q 026017 109 KQWYNVLGNHDYRGD 123 (244)
Q Consensus 109 iP~~~v~GNHD~~~~ 123 (244)
.-. .++||||+...
T Consensus 76 ~Da-~~~GNHEfD~G 89 (285)
T cd07405 76 YDA-MAVGNHEFDNP 89 (285)
T ss_pred CcE-EeecccccccC
Confidence 444 46699999765
No 111
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.68 E-value=0.03 Score=48.34 Aligned_cols=80 Identities=13% Similarity=0.150 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCCC----------ChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC
Q 026017 39 LSFLVVGDWGRRGAY----------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (244)
Q Consensus 39 ~~f~~igD~~~~~~~----------~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~ 108 (244)
++++.++|+|+.-.+ .-.++...++++.++.+..+++..||++......+. -..-....+. +..++
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~-~~~g~~~~~~---~n~~g 76 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESA-LLQDEPTIEA---LNAMG 76 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhh-cccCCcHHHH---HHhhC
Confidence 478999999953111 124556666665543333589999999832221110 0000111111 12334
Q ss_pred CceEEecCCCCCCCC
Q 026017 109 KQWYNVLGNHDYRGD 123 (244)
Q Consensus 109 iP~~~v~GNHD~~~~ 123 (244)
+- +.++||||+...
T Consensus 77 ~D-a~t~GNHefd~G 90 (288)
T cd07412 77 VD-ASAVGNHEFDEG 90 (288)
T ss_pred Ce-eeeecccccccC
Confidence 44 477899998754
No 112
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.60 E-value=0.076 Score=48.40 Aligned_cols=90 Identities=14% Similarity=0.238 Sum_probs=50.8
Q ss_pred CCCCCeEEEEEecCCCCCCCC--hHHHHHHHHHHHh----hcCCCEEEEcCCcccCCCCCCcch--------hhhHHHhh
Q 026017 34 KPDGSLSFLVVGDWGRRGAYN--QTKVAHQMGIVGE----KLKIDFIISTGDNFYDDGLTGVDD--------AAFFESFV 99 (244)
Q Consensus 34 ~~~~~~~f~~igD~~~~~~~~--q~~v~~~i~~i~~----~~~pdfvl~~GDlvy~~G~~~~~~--------~~~~~~~~ 99 (244)
.....++.++++|+| .|+.. .....+.++.+.- ..+...++.+||.+..-|....+. .+..+.++
T Consensus 221 ~~~e~v~v~~isDih-~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A 299 (481)
T COG1311 221 TGDERVYVALISDIH-RGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELA 299 (481)
T ss_pred CCCcceEEEEEeeee-cccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHH
Confidence 356678999999999 46421 2222233332221 124578999999995444432111 11122333
Q ss_pred hhccCCCCCCceEEecCCCCCCCCc
Q 026017 100 NIYTAPSLAKQWYNVLGNHDYRGDV 124 (244)
Q Consensus 100 ~~~~~~~l~iP~~~v~GNHD~~~~~ 124 (244)
.++..-.-.+.++..|||||.....
T Consensus 300 ~~L~~vp~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 300 EFLDQVPEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred HHHhhCCCCceEEEecCCCCccccc
Confidence 3332112268899999999987543
No 113
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=95.54 E-value=0.2 Score=42.15 Aligned_cols=70 Identities=24% Similarity=0.452 Sum_probs=37.9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCCC
Q 026017 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (244)
Q Consensus 42 ~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (244)
+++||+= |......+.+.+.++.++.++|||+..|.+. ..|. +-..... +.++. +.+- +.+.|||=|.
T Consensus 1 LfiGDIv--G~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENa-a~G~-Git~~~~----~~L~~---~GvD-viT~GNH~wd 68 (253)
T PF13277_consen 1 LFIGDIV--GKPGRRAVKEHLPELKEEYGIDFVIANGENA-AGGF-GITPKIA----EELFK---AGVD-VITMGNHIWD 68 (253)
T ss_dssp EEE-EBB--CHHHHHHHHHHHHHHGG--G-SEEEEE-TTT-TTTS-S--HHHH----HHHHH---HT-S-EEE--TTTTS
T ss_pred CeEEecC--CHHHHHHHHHHHHHHHhhcCCCEEEECCccc-CCCC-CCCHHHH----HHHHh---cCCC-EEecCccccc
Confidence 5789963 4445566778888888878999999999998 4443 2222222 22221 1333 4689999997
Q ss_pred CC
Q 026017 122 GD 123 (244)
Q Consensus 122 ~~ 123 (244)
..
T Consensus 69 kk 70 (253)
T PF13277_consen 69 KK 70 (253)
T ss_dssp ST
T ss_pred Cc
Confidence 53
No 114
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=95.27 E-value=0.16 Score=52.22 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=30.2
Q ss_pred CCCCeEEEEEecCCCCC-CC-----------ChHHHHHHHHHHHhhcCCC-EEEEcCCccc
Q 026017 35 PDGSLSFLVVGDWGRRG-AY-----------NQTKVAHQMGIVGEKLKID-FIISTGDNFY 82 (244)
Q Consensus 35 ~~~~~~f~~igD~~~~~-~~-----------~q~~v~~~i~~i~~~~~pd-fvl~~GDlvy 82 (244)
....++++..+|+|+.- .+ .-.+++..++++.+ ..++ +++..||++.
T Consensus 38 ~~~~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~-~~~n~llld~GD~~q 97 (1163)
T PRK09419 38 PLVNIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARK-ENPNTLLVDNGDLIQ 97 (1163)
T ss_pred CceEEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHH-hCCCeEEEeCCCccC
Confidence 34679999999999631 11 11455666666544 3454 5667999994
No 115
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=94.67 E-value=0.39 Score=44.96 Aligned_cols=108 Identities=22% Similarity=0.287 Sum_probs=62.8
Q ss_pred HHHHHHHhhhhcccCCCCCCcc---CCCCCCCCeEEEEEecCCCC-C------CCCh-----HHHHHHHHHHHhhcCCCE
Q 026017 9 FIALLGSLYVFCPSSAELPWFE---HPAKPDGSLSFLVVGDWGRR-G------AYNQ-----TKVAHQMGIVGEKLKIDF 73 (244)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~f~~igD~~~~-~------~~~q-----~~v~~~i~~i~~~~~pdf 73 (244)
.+++|+.++..+|.+++..-.. .-+......+|...+|+|+- + .+.+ ..++..|+.+++...+|.
T Consensus 10 l~~lL~~~~~~~p~as~~~~ap~~ii~~~~~~~~nf~hTtdthG~~~~h~~~~~~~~~~G~f~~f~~~~k~~a~~~~~dv 89 (602)
T KOG4419|consen 10 LLALLGLPIPPTPAASEADLAPEYIIRHLNWGQPNFIHTTDTHGWLGSHLRDARYDADFGDFAAFALRMKELADRKGVDV 89 (602)
T ss_pred HHHHhhccCCCCccccccccchhhheeccccccccceeeccccccccccccchhhhhhhhhHHHHHHHHHHHHhccCCCE
Confidence 4566788887777766543211 11245778899999999851 1 1111 344555677776667764
Q ss_pred -EEEcCCcccCCCCCCcchhh--hHHHhhhhccCCCCCCc-eEEecCCCCCCCC
Q 026017 74 -IISTGDNFYDDGLTGVDDAA--FFESFVNIYTAPSLAKQ-WYNVLGNHDYRGD 123 (244)
Q Consensus 74 -vl~~GDlvy~~G~~~~~~~~--~~~~~~~~~~~~~l~iP-~~~v~GNHD~~~~ 123 (244)
++-+||.-..+|.....+.+ +.+.+-+ ..| =..+.||||.+..
T Consensus 90 l~~dtGD~hdGtg~sd~~~~~g~~t~~l~~-------~~~yD~l~lGNHEl~~~ 136 (602)
T KOG4419|consen 90 LLVDTGDLHDGTGLSDATDPPGIYTNFLFK-------MMPYDILTLGNHELYQA 136 (602)
T ss_pred EEEecccccCCceeeeccCCchHHHHHHHh-------cCccchhhhcchhhhhh
Confidence 78899987555543222222 2222111 122 3568999998754
No 116
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=93.82 E-value=0.16 Score=44.78 Aligned_cols=72 Identities=15% Similarity=0.280 Sum_probs=42.7
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCC-CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~p-dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
-+.++||.|+. -..+.+.+..... .+| .-.+++||.+ +.|..+-+.--+.-.++ ...+--++...|||
T Consensus 60 PV~i~GDiHGq----~~DLlrlf~~~g~-~pp~~~ylFLGDYV-DRG~~slE~i~LL~a~K-----i~yp~~~~lLRGNH 128 (331)
T KOG0374|consen 60 PVKIVGDIHGQ----FGDLLRLFDLLGS-FPPDQNYVFLGDYV-DRGKQSLETICLLFALK-----IKYPENVFLLRGNH 128 (331)
T ss_pred CEEEEccCcCC----HHHHHHHHHhcCC-CCCcccEEEecccc-cCCccceEEeehhhhhh-----hhCCceEEEecccc
Confidence 57899999961 1344444443221 235 4599999999 77755422111111111 12456799999999
Q ss_pred CCCC
Q 026017 119 DYRG 122 (244)
Q Consensus 119 D~~~ 122 (244)
|...
T Consensus 129 E~~~ 132 (331)
T KOG0374|consen 129 ECAS 132 (331)
T ss_pred cccc
Confidence 9763
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=93.80 E-value=0.19 Score=43.94 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=26.7
Q ss_pred eEEEEEecCCCCC--CCChHHHHHHHHHHHhh----cCCCEEEEcCCcc
Q 026017 39 LSFLVVGDWGRRG--AYNQTKVAHQMGIVGEK----LKIDFIISTGDNF 81 (244)
Q Consensus 39 ~~f~~igD~~~~~--~~~q~~v~~~i~~i~~~----~~pdfvl~~GDlv 81 (244)
++++.+.|+|+.- ...-.+++..++++.++ .+..+++..||++
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~ 49 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNF 49 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccc
Confidence 4789999999631 11224444455554332 2346899999998
No 118
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.76 E-value=0.47 Score=46.59 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=31.0
Q ss_pred CCCCeEEEEEecCCCCC-C--C-----C----hHHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 35 PDGSLSFLVVGDWGRRG-A--Y-----N----QTKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 35 ~~~~~~f~~igD~~~~~-~--~-----~----q~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
....++++..+|+|+.= . + . -.+++..++++.++.+-.+++..||++
T Consensus 36 ~~~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~i 94 (780)
T PRK09418 36 STVNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDAL 94 (780)
T ss_pred CceEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCC
Confidence 35589999999999731 1 1 1 134555666654433346899999998
No 119
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=93.69 E-value=1.6 Score=37.05 Aligned_cols=56 Identities=7% Similarity=-0.088 Sum_probs=34.1
Q ss_pred CCceEEecCCCCCCCCccccccc---cccCC--CCceee-eeeEEEcCceEEEEEEeCcccc
Q 026017 108 AKQWYNVLGNHDYRGDVEAQLSP---VLRDI--DSRWLC-LRSFIVNAEIAEFIFVDTTPFV 163 (244)
Q Consensus 108 ~iP~~~v~GNHD~~~~~~~~~~~---~~~~~--~~~~~~-p~~Ysf~~~~~~fi~LDs~~~~ 163 (244)
.+|+...|||||-......|... .+... ...+.. ..-|.|+.++++|++...+...
T Consensus 94 ~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 94 SVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred CCeEEECCCCCCcccccCCCCCCCHHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHH
Confidence 69999999999987654333211 01110 111111 2346788889999998887653
No 120
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=93.61 E-value=0.3 Score=46.13 Aligned_cols=79 Identities=14% Similarity=0.114 Sum_probs=41.8
Q ss_pred eEEEEEecCCCCC-CC----------------ChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhh
Q 026017 39 LSFLVVGDWGRRG-AY----------------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNI 101 (244)
Q Consensus 39 ~~f~~igD~~~~~-~~----------------~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~ 101 (244)
++++.+.|+|+.= +. .-.+++..++++.++.+..+++..||.+ .|..-..-..-....+.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~--~gs~~~~~~~g~~~i~~- 77 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAI--IGTLYFTLFGGRADAAL- 77 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCC--CCccchhhcCCHHHHHH-
Confidence 4788999998530 00 0134455566554434446899999998 34321100000111111
Q ss_pred ccCCCCCCceEEecCCCCCCCC
Q 026017 102 YTAPSLAKQWYNVLGNHDYRGD 123 (244)
Q Consensus 102 ~~~~~l~iP~~~v~GNHD~~~~ 123 (244)
+..+ ..=+.++||||+...
T Consensus 78 --~N~~-g~Da~~lGNHEFd~G 96 (550)
T TIGR01530 78 --MNAA-GFDFFTLGNHEFDAG 96 (550)
T ss_pred --Hhcc-CCCEEEeccccccCC
Confidence 1122 234788999999765
No 121
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=93.37 E-value=0.14 Score=43.81 Aligned_cols=123 Identities=15% Similarity=0.120 Sum_probs=68.1
Q ss_pred EEEEcCCcccCCCCCCcc--hhhhHHHhhhhccC----CCCCCceEEecCCCCCCCCcc--------cccccccc---CC
Q 026017 73 FIISTGDNFYDDGLTGVD--DAAFFESFVNIYTA----PSLAKQWYNVLGNHDYRGDVE--------AQLSPVLR---DI 135 (244)
Q Consensus 73 fvl~~GDlvy~~G~~~~~--~~~~~~~~~~~~~~----~~l~iP~~~v~GNHD~~~~~~--------~~~~~~~~---~~ 135 (244)
-++..||++.+.|..+-+ +..-...|+..|+. ..+.+|+|+-.||||..-+.. .+....++ ..
T Consensus 129 GlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~ 208 (392)
T COG5555 129 GLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRS 208 (392)
T ss_pred eEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCc
Confidence 367788999544432110 01111223444432 134699999999999864321 11111011 11
Q ss_pred CCceeee----------eeEEEcCceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhh--CC
Q 026017 136 DSRWLCL----------RSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKE--ST 203 (244)
Q Consensus 136 ~~~~~~p----------~~Ysf~~~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~--~~ 203 (244)
...|..| ..||.+.+.+|.+-+-+.... ..|+. + --+- ||+.+|.. +.
T Consensus 209 ~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd----~~~ga---~------------sslp-wlk~dl~~~aad 268 (392)
T COG5555 209 DVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGD----AEPGA---N------------SSLP-WLKVDLIYSAAD 268 (392)
T ss_pred CcccCCCCCcccccccchheeccccceeEEEEeeeccc----cCCCc---c------------ccCc-ceeccceeeccC
Confidence 2234322 358899999999888775432 11211 1 1133 99999975 46
Q ss_pred CCEEEEEcCccc
Q 026017 204 AKWKIVVGHHTI 215 (244)
Q Consensus 204 ~~~~iv~~H~P~ 215 (244)
.++++++.|.-.
T Consensus 269 grpv~LfqhyGw 280 (392)
T COG5555 269 GRPVYLFQHYGW 280 (392)
T ss_pred CCceeehhhhCc
Confidence 789999999853
No 122
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=93.30 E-value=0.17 Score=42.98 Aligned_cols=72 Identities=22% Similarity=0.266 Sum_probs=45.0
Q ss_pred CCCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCC-Cce
Q 026017 33 AKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA-KQW 111 (244)
Q Consensus 33 ~~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~-iP~ 111 (244)
|...+..+|+.++|+|.. ... |....+-|+.+++||.+ ..|.. ++...|... +-++. .--
T Consensus 56 p~~~~~~r~VcisdtH~~-~~~----------i~~~p~gDvlihagdfT-~~g~~-----~ev~~fn~~--~gslph~yK 116 (305)
T KOG3947|consen 56 PVGPGYARFVCISDTHEL-TFD----------INDIPDGDVLIHAGDFT-NLGLP-----EEVIKFNEW--LGSLPHEYK 116 (305)
T ss_pred CCCCCceEEEEecCcccc-cCc----------cccCCCCceEEeccCCc-cccCH-----HHHHhhhHH--hccCcceee
Confidence 356778999999999941 111 22224569999999999 55543 233333331 11222 345
Q ss_pred EEecCCCCCCCC
Q 026017 112 YNVLGNHDYRGD 123 (244)
Q Consensus 112 ~~v~GNHD~~~~ 123 (244)
+++.||||...+
T Consensus 117 IVIaGNHELtFd 128 (305)
T KOG3947|consen 117 IVIAGNHELTFD 128 (305)
T ss_pred EEEeeccceeec
Confidence 788999998765
No 123
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=92.42 E-value=0.1 Score=42.58 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=53.1
Q ss_pred EEEEecCCCCCCC-ChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCc-c----hhhhHH----HhhhhccCCCCCCc
Q 026017 41 FLVVGDWGRRGAY-NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGV-D----DAAFFE----SFVNIYTAPSLAKQ 110 (244)
Q Consensus 41 f~~igD~~~~~~~-~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~-~----~~~~~~----~~~~~~~~~~l~iP 110 (244)
+++++|.+..... .-+.+.+.+..+.+..+|+.+|++|+++........ . ...... .+...+..-.-.++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788998742111 113334444433324689999999999943211100 0 011111 11111111112589
Q ss_pred eEEecCCCCCCCC-ccccccc---cccCCCC---ceeeeeeEEEcCceEEEEEEeCccc
Q 026017 111 WYNVLGNHDYRGD-VEAQLSP---VLRDIDS---RWLCLRSFIVNAEIAEFIFVDTTPF 162 (244)
Q Consensus 111 ~~~v~GNHD~~~~-~~~~~~~---~~~~~~~---~~~~p~~Ysf~~~~~~fi~LDs~~~ 162 (244)
++.+||+||.... .-.|-.. .+....+ -...+.-+.++.++..|++......
T Consensus 81 vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~d~~ 139 (209)
T PF04042_consen 81 VVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSGDIL 139 (209)
T ss_dssp EEEE--TTCTT-S-SCSB----TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SSHHH
T ss_pred EEEeCCCccccccCCCCCCCCCHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECCcHH
Confidence 9999999998765 2222110 0111111 1222334556777888877776653
No 124
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=91.52 E-value=1.5 Score=42.29 Aligned_cols=46 Identities=15% Similarity=0.202 Sum_probs=30.6
Q ss_pred CCCeEEEEEecCCCCC-C--C-----C----hHHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 36 DGSLSFLVVGDWGRRG-A--Y-----N----QTKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 36 ~~~~~f~~igD~~~~~-~--~-----~----q~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
...++++..+|+|+.= . + . -.+++..++++.++.+--+++..||++
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~ 80 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLI 80 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcC
Confidence 4589999999999631 1 1 1 135556666654433346899999998
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.24 E-value=1.1 Score=44.13 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=29.9
Q ss_pred CCCeEEEEEecCCCCC-C--C-C--------hHHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 36 DGSLSFLVVGDWGRRG-A--Y-N--------QTKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 36 ~~~~~f~~igD~~~~~-~--~-~--------q~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
...++++...|+|+.= . + . -.+++..++++.++.+--+++..||++
T Consensus 113 ~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~i 170 (814)
T PRK11907 113 TVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTI 170 (814)
T ss_pred ceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCC
Confidence 3479999999999731 1 1 0 135555566654433336899999998
No 126
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=90.98 E-value=0.39 Score=40.18 Aligned_cols=68 Identities=22% Similarity=0.285 Sum_probs=38.5
Q ss_pred EEEEecCCCCCCCCh-HHHHHHHHHHHhhcCC-CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCC
Q 026017 41 FLVVGDWGRRGAYNQ-TKVAHQMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGN 117 (244)
Q Consensus 41 f~~igD~~~~~~~~q-~~v~~~i~~i~~~~~p-dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GN 117 (244)
+.+.||+|+ | .++.+.++ +.. ..| .=-+++||.| +.|..+.+ .|--+..++ ..+-.+-.+.||
T Consensus 45 vtvcGDIHG-----Qf~Dllelf~-igG-~~~~t~YLFLGDyV-DRG~~SvE------t~lLLl~lK~rYP~ritLiRGN 110 (303)
T KOG0372|consen 45 VTVCGDIHG-----QFYDLLELFR-IGG-DVPETNYLFLGDYV-DRGYYSVE------TFLLLLALKVRYPDRITLIRGN 110 (303)
T ss_pred cEEeecccc-----hHHHHHHHHH-hCC-CCCCCceEeecchh-ccccchHH------HHHHHHHHhhcCcceeEEeecc
Confidence 468999996 3 33333332 222 223 4489999999 77765421 111111111 234568899999
Q ss_pred CCCCC
Q 026017 118 HDYRG 122 (244)
Q Consensus 118 HD~~~ 122 (244)
||.+.
T Consensus 111 HEsRq 115 (303)
T KOG0372|consen 111 HESRQ 115 (303)
T ss_pred chhhh
Confidence 99753
No 127
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=89.82 E-value=0.97 Score=43.41 Aligned_cols=44 Identities=18% Similarity=0.254 Sum_probs=29.2
Q ss_pred CeEEEEEecCCCCC-CC-------C----hHHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 38 SLSFLVVGDWGRRG-AY-------N----QTKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 38 ~~~f~~igD~~~~~-~~-------~----q~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
.++++...|+|+.= .+ . -.+++..++++.++..--+++..||++
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~ 57 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLI 57 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcC
Confidence 58999999999631 11 0 145566666654433446899999998
No 128
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=89.22 E-value=2 Score=36.97 Aligned_cols=84 Identities=11% Similarity=-0.068 Sum_probs=48.8
Q ss_pred CCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhh--------cCCCEEEEcCCcccCCCCC-CcchhhhHHHhhhhcc-
Q 026017 34 KPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEK--------LKIDFIISTGDNFYDDGLT-GVDDAAFFESFVNIYT- 103 (244)
Q Consensus 34 ~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~--------~~pdfvl~~GDlvy~~G~~-~~~~~~~~~~~~~~~~- 103 (244)
++....+|+++||.+. ++..+.++++++-+. ..|-++|+.|+++...-.. +.....+.+.|+++..
T Consensus 23 ~~~~~~~~VilSDV~L----D~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~l 98 (291)
T PTZ00235 23 KNDKRHNWIIMHDVYL----DSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVM 98 (291)
T ss_pred cCCCceEEEEEEeecc----CCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHH
Confidence 4566789999999985 444555555543221 2388999999998432000 1111123333433321
Q ss_pred ----CCCC--CCceEEecCCCCCC
Q 026017 104 ----APSL--AKQWYNVLGNHDYR 121 (244)
Q Consensus 104 ----~~~l--~iP~~~v~GNHD~~ 121 (244)
.+.+ +.-++.|||-.|-.
T Consensus 99 lls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 99 LISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHhChHHHhcCeEEEECCCCCCC
Confidence 1222 47899999999964
No 129
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=87.75 E-value=0.98 Score=38.17 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=38.5
Q ss_pred EEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCE-EEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceEEecCC
Q 026017 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDF-IISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGN 117 (244)
Q Consensus 40 ~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdf-vl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~~v~GN 117 (244)
-..+.||.|+ +-.++.+.+ +|-- ..||. .++.||.+ +.|..+.. ...-+...+ ..+-.+-.++||
T Consensus 61 pvtvcGDvHG----qf~dl~ELf-kiGG-~~pdtnylfmGDyv-drGy~Sve------tVS~lva~Kvry~~rvtilrGN 127 (319)
T KOG0371|consen 61 PVTVCGDVHG----QFHDLIELF-KIGG-LAPDTNYLFMGDYV-DRGYYSVE------TVSLLVALKVRYPDRVTILRGN 127 (319)
T ss_pred ceEEecCcch----hHHHHHHHH-HccC-CCCCcceeeeeeec-ccccchHH------HHHHHHHhhccccceeEEecCc
Confidence 4678899995 113333333 2322 45655 88999999 67755421 111111111 223457889999
Q ss_pred CCCC
Q 026017 118 HDYR 121 (244)
Q Consensus 118 HD~~ 121 (244)
||..
T Consensus 128 HEsr 131 (319)
T KOG0371|consen 128 HESR 131 (319)
T ss_pred hHHH
Confidence 9964
No 130
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.87 E-value=3.4 Score=37.76 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=43.8
Q ss_pred eEEEEEecCCCCCCCChHHHHHHHHHHHhhcCC-CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCC
Q 026017 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (244)
Q Consensus 39 ~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~p-dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (244)
.++++.||..+ . -.++.+.++++.++..| |+++..|++. +. ++.+.+|.+ +.. ....+.+|.|..-+|
T Consensus 6 ~kILv~Gd~~G--r--~~eli~rI~~v~Kk~GpFd~liCvGnfF-~~---~~~~~e~~~-ykn--g~~~vPiptY~~g~~ 74 (528)
T KOG2476|consen 6 AKILVCGDVEG--R--FDELIKRIQKVNKKSGPFDLLICVGNFF-GH---DTQNAEVEK-YKN--GTKKVPIPTYFLGDN 74 (528)
T ss_pred ceEEEEcCccc--c--HHHHHHHHHHHhhcCCCceEEEEecccC-CC---ccchhHHHH-Hhc--CCccCceeEEEecCC
Confidence 68999999753 2 23445556666666665 9999999998 32 112333332 111 234567999988887
Q ss_pred C
Q 026017 118 H 118 (244)
Q Consensus 118 H 118 (244)
-
T Consensus 75 ~ 75 (528)
T KOG2476|consen 75 A 75 (528)
T ss_pred C
Confidence 6
No 131
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=75.16 E-value=6.1 Score=32.74 Aligned_cols=67 Identities=25% Similarity=0.288 Sum_probs=37.8
Q ss_pred EEEEecCCCCCCCCh-HHHHHHHHHHHhhcCCCE-EEEcCCcccCCCCCCcchhhhHHHhhhhccC-CCCCCceEEecCC
Q 026017 41 FLVVGDWGRRGAYNQ-TKVAHQMGIVGEKLKIDF-IISTGDNFYDDGLTGVDDAAFFESFVNIYTA-PSLAKQWYNVLGN 117 (244)
Q Consensus 41 f~~igD~~~~~~~~q-~~v~~~i~~i~~~~~pdf-vl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~-~~l~iP~~~v~GN 117 (244)
+-+-||+|+ | .++.+.++. .- .-||- -++.||.+ +.|..+. +.|..+..+ ...+..+-.+.||
T Consensus 48 VTvCGDIHG-----QFyDL~eLFrt-gG-~vP~tnYiFmGDfV-DRGyySL------EtfT~l~~LkaryP~~ITLlRGN 113 (306)
T KOG0373|consen 48 VTVCGDIHG-----QFYDLLELFRT-GG-QVPDTNYIFMGDFV-DRGYYSL------ETFTLLLLLKARYPAKITLLRGN 113 (306)
T ss_pred eeEeeccch-----hHHHHHHHHHh-cC-CCCCcceEEecccc-ccccccH------HHHHHHHHHhhcCCceeEEeecc
Confidence 357899995 3 333333332 11 23444 78999999 7776542 222222211 1234567788999
Q ss_pred CCCC
Q 026017 118 HDYR 121 (244)
Q Consensus 118 HD~~ 121 (244)
||.+
T Consensus 114 HEsR 117 (306)
T KOG0373|consen 114 HESR 117 (306)
T ss_pred chhh
Confidence 9965
No 132
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=73.25 E-value=9.9 Score=33.82 Aligned_cols=68 Identities=22% Similarity=0.256 Sum_probs=38.1
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHHhhcCC--CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCC
Q 026017 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKI--DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (244)
Q Consensus 41 f~~igD~~~~~~~~q~~v~~~i~~i~~~~~p--dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (244)
+-+-||+|+ | ..+.|+-..--.+| -=-+++||.| +.|..+-+.--+.-.++ -.....++...|||
T Consensus 90 iTVCGDIHG-----Q--f~DLmKLFEVGG~PA~t~YLFLGDYV-DRGyFSiECvlYLwsLK-----i~yp~tl~lLRGNH 156 (517)
T KOG0375|consen 90 ITVCGDIHG-----Q--FFDLMKLFEVGGSPANTRYLFLGDYV-DRGYFSIECVLYLWSLK-----INYPKTLFLLRGNH 156 (517)
T ss_pred eeEecccch-----H--HHHHHHHHHccCCcccceeEeecccc-ccceeeeehHHHHHHHh-----cCCCCeEEEecCCc
Confidence 467899995 2 33334321111233 3478999999 77765432211111111 12356799999999
Q ss_pred CCC
Q 026017 119 DYR 121 (244)
Q Consensus 119 D~~ 121 (244)
|..
T Consensus 157 ECr 159 (517)
T KOG0375|consen 157 ECR 159 (517)
T ss_pred chh
Confidence 975
No 133
>PF09049 SNN_transmemb: Stannin transmembrane; InterPro: IPR015135 This region consists of a single highly hydrophobic transmembrane helix that transverses the lipid bilayer at a 20 degree angle with respect to the membrane normal. It contains a conserved cysteine residue (Cys32) that, together with Cys34 found in the stannin unstructured linker domain, constitutes the putative trimethyltin-binding site that resides at the end of the transmembrane domain close to the lipid/solvent interface []. ; PDB: 1ZZA_A.
Probab=71.43 E-value=4.7 Score=22.01 Aligned_cols=17 Identities=47% Similarity=0.848 Sum_probs=10.5
Q ss_pred hHHHHHHHH--HHHhhhhc
Q 026017 4 TLIITFIAL--LGSLYVFC 20 (244)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~ 20 (244)
|.++..|++ |++++|+|
T Consensus 14 ti~viliavaalg~licgc 32 (33)
T PF09049_consen 14 TIIVILIAVAALGALICGC 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred EehhHHHHHHHHhhhheec
Confidence 345555555 67777876
No 134
>PF03823 Neurokinin_B: Neurokinin B; InterPro: IPR003635 Tachykinins [, , ] are a group of biologically active peptides which excite neurons, evoke behavioral responses, are potent vasodilatators and contract (directly or indirectly) many smooth muscles. This family includes neurokinins, as well as many other peptides. Like other tachykinins, neurokinins are synthesized as larger protein precursors that are enzymatically converted to their mature forms.; GO: 0007217 tachykinin receptor signaling pathway
Probab=65.32 E-value=9 Score=24.28 Aligned_cols=33 Identities=24% Similarity=0.139 Sum_probs=24.4
Q ss_pred CchhHHHHHHHHHHHhhhhcccCCCCCCccCCC
Q 026017 1 MSLTLIITFIALLGSLYVFCPSSAELPWFEHPA 33 (244)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 33 (244)
||-+||.+-|..+.++-.+++-|+|-+.=-.|.
T Consensus 1 MR~~lLf~aiLalsla~s~gavCeesQeQ~~p~ 33 (59)
T PF03823_consen 1 MRSTLLFAAILALSLARSFGAVCEESQEQVVPG 33 (59)
T ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhccCCC
Confidence 788888777777777777788888877655453
No 135
>COG4594 FecB ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=62.32 E-value=7 Score=33.13 Aligned_cols=26 Identities=38% Similarity=0.332 Sum_probs=20.0
Q ss_pred CchhHHHHHHHHHHHhhhhcccCCCC
Q 026017 1 MSLTLIITFIALLGSLYVFCPSSAEL 26 (244)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (244)
|-.+.+|.|++|+.++++.|+||.-=
T Consensus 3 ~~~~~~i~~lll~lllva~C~~s~~~ 28 (310)
T COG4594 3 MKKTAIILTLLLLLLLVAACSSSDNN 28 (310)
T ss_pred chhhHHHHHHHHHHHHHHHhcCcCcc
Confidence 45678888888888888888887543
No 136
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=60.10 E-value=56 Score=30.04 Aligned_cols=85 Identities=16% Similarity=0.083 Sum_probs=53.4
Q ss_pred CCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhh---cCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhcc-C---CC
Q 026017 34 KPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEK---LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-A---PS 106 (244)
Q Consensus 34 ~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~---~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~-~---~~ 106 (244)
+...+.+|++++|.+. ++.++.+++.++-+. ..|-++|+.|-++... .....-.++.+.|..+.. + ..
T Consensus 278 ~~~~d~~fVfLSdV~L----D~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p-~~~~s~~~~k~~f~~LA~~l~~~~~ 352 (525)
T KOG3818|consen 278 AENTDTSFVFLSDVFL----DDKKVMEALRKIFQGYKDAPPTAIILCGSFTSSP-RQTSSSDQLKDGFRWLAAQLTCFRK 352 (525)
T ss_pred HhCcCceEEEEehhcc----ccHHHHHHHHHHHhhccCCCCeEEEEeccccccc-cccchHHHHHHHHHHHHhhcccccc
Confidence 3466778999999875 456777777766542 4578999999998322 111122345554433221 1 11
Q ss_pred --CCCceEEecCCCCCCCC
Q 026017 107 --LAKQWYNVLGNHDYRGD 123 (244)
Q Consensus 107 --l~iP~~~v~GNHD~~~~ 123 (244)
-+..++.|||-.|-..+
T Consensus 353 ~~ekT~fIFVPGP~Dp~~~ 371 (525)
T KOG3818|consen 353 DYEKTQFIFVPGPNDPWVD 371 (525)
T ss_pred ccccceEEEecCCCCCCcC
Confidence 14789999999996643
No 137
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=58.45 E-value=24 Score=31.71 Aligned_cols=42 Identities=21% Similarity=0.243 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEec
Q 026017 60 HQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVL 115 (244)
Q Consensus 60 ~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~ 115 (244)
..+.++.++.+||+|++-||-. ..+..+....+ .++|+.++=
T Consensus 82 ~~~~~vl~~~kPD~VlVhGDT~----------t~lA~alaa~~----~~IpV~HvE 123 (383)
T COG0381 82 EGLSKVLEEEKPDLVLVHGDTN----------TTLAGALAAFY----LKIPVGHVE 123 (383)
T ss_pred HHHHHHHHhhCCCEEEEeCCcc----------hHHHHHHHHHH----hCCceEEEe
Confidence 3445566668999999999975 12333333332 378887763
No 138
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=57.75 E-value=1.1e+02 Score=25.45 Aligned_cols=21 Identities=24% Similarity=0.275 Sum_probs=14.7
Q ss_pred HHHHHHhh--CCCCEEEEEcCcc
Q 026017 194 DVDSALKE--STAKWKIVVGHHT 214 (244)
Q Consensus 194 WL~~~L~~--~~~~~~iv~~H~P 214 (244)
.+.+++++ .+.+.+||++|--
T Consensus 172 ~i~~~i~~~r~~~D~vIv~~HwG 194 (250)
T PF09587_consen 172 RIKEDIREARKKADVVIVSLHWG 194 (250)
T ss_pred HHHHHHHHHhcCCCEEEEEeccC
Confidence 55555554 3578999999964
No 139
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=52.97 E-value=29 Score=30.74 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=24.5
Q ss_pred HHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCC
Q 026017 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (244)
Q Consensus 62 i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (244)
+.++.++.+||+|+..||-. +.+..+.... .+++|+.++-|=
T Consensus 59 ~~~~~~~~~Pd~Vlv~GD~~----------~~la~alaA~----~~~ipv~HieaG 100 (346)
T PF02350_consen 59 LADVLEREKPDAVLVLGDRN----------EALAAALAAF----YLNIPVAHIEAG 100 (346)
T ss_dssp HHHHHHHHT-SEEEEETTSH----------HHHHHHHHHH----HTT-EEEEES--
T ss_pred HHHHHHhcCCCEEEEEcCCc----------hHHHHHHHHH----HhCCCEEEecCC
Confidence 34444558999999999965 2343333332 248999988764
No 140
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=51.92 E-value=40 Score=28.05 Aligned_cols=55 Identities=15% Similarity=0.255 Sum_probs=36.6
Q ss_pred CCCCccCCCCCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 25 ELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 25 ~~~~~~~p~~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
+++..++|. +..+ -++++||++......|.++...+-+++++.....|.-+|-.-
T Consensus 73 e~Y~~k~~~-~~~D-liil~Gd~Q~~~~~gqyel~~~~Ld~a~e~g~~~IyTLGGy~ 127 (258)
T COG2047 73 EFYYWKSPG-GERD-LIILVGDTQATSSEGQYELTGKILDIAKEFGARMIYTLGGYG 127 (258)
T ss_pred eeEEEecCC-CCCc-EEEEeccccccCcchhHHHHHHHHHHHHHcCCcEEEEecCcc
Confidence 334445543 2323 367788987655566777888777777777888888888753
No 141
>PRK14762 membrane protein; Provisional
Probab=49.55 E-value=22 Score=18.59 Aligned_cols=15 Identities=33% Similarity=0.410 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHhhhh
Q 026017 5 LIITFIALLGSLYVF 19 (244)
Q Consensus 5 ~~~~~~~~~~~~~~~ 19 (244)
.++.+|++.|++++.
T Consensus 6 w~i~iifligllvvt 20 (27)
T PRK14762 6 WAVLIIFLIGLLVVT 20 (27)
T ss_pred HHHHHHHHHHHHHHH
Confidence 356677777777654
No 142
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=47.46 E-value=23 Score=29.68 Aligned_cols=45 Identities=16% Similarity=0.307 Sum_probs=26.3
Q ss_pred EEEEcCCcccCCCCC---CcchhhhHHHhhhhccCCCCCCceEEecCCCCCC
Q 026017 73 FIISTGDNFYDDGLT---GVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (244)
Q Consensus 73 fvl~~GDlvy~~G~~---~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (244)
-++++||.++..|.. ..+..+|.+.++++. .+..-..+.|| |++.
T Consensus 120 ~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~~l~---~l~~~~~i~pG-H~~~ 167 (248)
T TIGR03413 120 PALFCGDTLFSAGCGRLFEGTPEQMYDSLQRLA---ALPDDTLVYCA-HEYT 167 (248)
T ss_pred CEEEEcCccccCCcCCCCCCCHHHHHHHHHHHH---cCCCCeEEECC-CCch
Confidence 489999998765432 112244555554432 34444667888 8864
No 143
>PRK15396 murein lipoprotein; Provisional
Probab=46.72 E-value=18 Score=24.82 Aligned_cols=26 Identities=27% Similarity=0.400 Sum_probs=17.1
Q ss_pred CchhHHHHHHHHH-HHhhhhcccCCCC
Q 026017 1 MSLTLIITFIALL-GSLYVFCPSSAEL 26 (244)
Q Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~ 26 (244)
|..+.+++..+.+ .++..+|+++.++
T Consensus 1 m~~~kl~l~av~ls~~LLaGCAs~~kv 27 (78)
T PRK15396 1 MNRTKLVLGAVILGSTLLAGCSSNAKI 27 (78)
T ss_pred CchhHHHHHHHHHHHHHHHHcCCchhH
Confidence 5566666666666 4456899887533
No 144
>PRK11548 outer membrane biogenesis protein BamE; Provisional
Probab=42.28 E-value=28 Score=25.47 Aligned_cols=24 Identities=21% Similarity=0.166 Sum_probs=16.1
Q ss_pred CchhHHHHHHHHHHHhhhhcccCC
Q 026017 1 MSLTLIITFIALLGSLYVFCPSSA 24 (244)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~ 24 (244)
|++.+++.++++++++.++|++.+
T Consensus 1 m~~~~~~~~~~~~~~~LsgCs~~~ 24 (113)
T PRK11548 1 MRCKTLTAAAAVLLMLTAGCSTLE 24 (113)
T ss_pred CcchHHHHHHHHHHHHHcccCCCC
Confidence 777777666656666777786544
No 145
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=42.12 E-value=21 Score=23.01 Aligned_cols=17 Identities=41% Similarity=0.886 Sum_probs=11.9
Q ss_pred chhHHHHHHHHHH-Hhhh
Q 026017 2 SLTLIITFIALLG-SLYV 18 (244)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~ 18 (244)
+..|||.||++.| +||.
T Consensus 11 riVLLISfiIlfgRl~Y~ 28 (59)
T PF11119_consen 11 RIVLLISFIILFGRLIYS 28 (59)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 3457788888876 6663
No 146
>PRK14347 lipoate-protein ligase B; Provisional
Probab=40.89 E-value=70 Score=26.29 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEEcCcccccCCCCCC
Q 026017 188 ANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGN 223 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~~g~ 223 (244)
+.|.+ +.++..+....+.++++-|.|.|..|..+.
T Consensus 18 ~~q~~-~~~~~~~~~~~d~llllEH~pVyT~G~~~~ 52 (209)
T PRK14347 18 KLMED-YVNKVISDHEPEIVYLVEHSEVYTAGTNYK 52 (209)
T ss_pred HHHHH-HHHHHhcCCCCCEEEEEcCCCCeeCCCCCC
Confidence 45656 666555444467899999999999886554
No 147
>PF14981 FAM165: FAM165 family
Probab=39.84 E-value=29 Score=21.10 Aligned_cols=19 Identities=21% Similarity=0.291 Sum_probs=12.0
Q ss_pred hhHHHHHHHH--HHHhhhhcc
Q 026017 3 LTLIITFIAL--LGSLYVFCP 21 (244)
Q Consensus 3 ~~~~~~~~~~--~~~~~~~~~ 21 (244)
+-+|.||++. |.+|.+|++
T Consensus 6 vPlLlYILaaKtlilClaFAg 26 (51)
T PF14981_consen 6 VPLLLYILAAKTLILCLAFAG 26 (51)
T ss_pred chHHHHHHHHHHHHHHHHHhh
Confidence 4567788877 455555543
No 148
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=38.71 E-value=1.2e+02 Score=20.21 Aligned_cols=39 Identities=13% Similarity=0.237 Sum_probs=26.1
Q ss_pred CeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCc
Q 026017 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDN 80 (244)
Q Consensus 38 ~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDl 80 (244)
..++++.|.-.. .+...+..+++++.+ ..|+.+|+.|.-
T Consensus 3 g~rVli~GgR~~---~D~~~i~~~Ld~~~~-~~~~~~lvhGga 41 (71)
T PF10686_consen 3 GMRVLITGGRDW---TDHELIWAALDKVHA-RHPDMVLVHGGA 41 (71)
T ss_pred CCEEEEEECCcc---ccHHHHHHHHHHHHH-hCCCEEEEECCC
Confidence 567888887332 234667888887766 457777777764
No 149
>PF06129 Chordopox_G3: Chordopoxvirus G3 protein; InterPro: IPR010367 This family consists of several poxvirus specific G3 proteins. The function of this family is unknown.
Probab=38.70 E-value=31 Score=25.20 Aligned_cols=19 Identities=42% Similarity=0.563 Sum_probs=14.3
Q ss_pred CchhHHHHHHHHHHHhhhh
Q 026017 1 MSLTLIITFIALLGSLYVF 19 (244)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (244)
|.+..++.||+.+++||++
T Consensus 1 m~ll~l~ffi~Fl~~~Y~~ 19 (109)
T PF06129_consen 1 MWLLYLIFFILFLVLCYFF 19 (109)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 6777777777777777765
No 150
>CHL00020 psbN photosystem II protein N
Probab=37.93 E-value=36 Score=20.42 Aligned_cols=10 Identities=30% Similarity=0.398 Sum_probs=6.7
Q ss_pred hhcccCCCCC
Q 026017 18 VFCPSSAELP 27 (244)
Q Consensus 18 ~~~~~~~~~~ 27 (244)
+++|.|.++.
T Consensus 26 aFGppSk~Lr 35 (43)
T CHL00020 26 AFGQPSKQLR 35 (43)
T ss_pred ccCCchhccC
Confidence 6777776653
No 151
>PRK14341 lipoate-protein ligase B; Provisional
Probab=37.76 E-value=82 Score=25.97 Aligned_cols=35 Identities=11% Similarity=0.163 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEEcCcccccCCCCCC
Q 026017 188 ANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGN 223 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~~g~ 223 (244)
+-|.+ ++++..+....+.++++-|.|.|..|.++.
T Consensus 20 ~~q~~-~~~~~~~~~~~~~llllEH~pVyT~G~~~~ 54 (213)
T PRK14341 20 AFMEA-RVAAIAAGTADELVWLLEHPPLYTAGTSAK 54 (213)
T ss_pred HHHHH-HHHHHhcCCCCCEEEEECCCCCeeCCCCCC
Confidence 44545 555544434455688999999999887654
No 152
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=35.70 E-value=47 Score=31.83 Aligned_cols=49 Identities=22% Similarity=0.338 Sum_probs=28.7
Q ss_pred HHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCC
Q 026017 61 QMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (244)
Q Consensus 61 ~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (244)
++..+.++.-.|=+-++||+. +.|... ..-.+ .+....+ +=..+||||.
T Consensus 175 al~~lIqrL~VDhLHIvGDIy-DRGp~p---d~ImD---~Lm~~hs----vDIQWGNHDI 223 (640)
T PF06874_consen 175 ALSELIQRLAVDHLHIVGDIY-DRGPRP---DKIMD---RLMNYHS----VDIQWGNHDI 223 (640)
T ss_pred HHHHHHHHHhhhheeeccccc-CCCCCh---hHHHH---HHhcCCC----ccccccchHH
Confidence 344444456789999999976 888642 12222 2222233 3345799996
No 153
>PRK13791 lysozyme inhibitor; Provisional
Probab=35.28 E-value=65 Score=23.73 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=18.3
Q ss_pred HHHhhhhcccCCCCCCccCCCCCCCCeEEEEEec
Q 026017 13 LGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGD 46 (244)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~f~~igD 46 (244)
|..|......+.+++.++--+.+...+++..+..
T Consensus 16 ls~~~~~~~~~~~~~t~~YqC~~~~~l~V~y~n~ 49 (113)
T PRK13791 16 LSASTTSIAASQEITKSIYTCNDNQVLEVIYVNT 49 (113)
T ss_pred HhhhhhhccCCCCcccEEEECCCCCeEEEEEeCC
Confidence 4444444434555555555555556677776643
No 154
>KOG2126 consensus Glycosylphosphatidylinositol anchor synthesis protein [Signal transduction mechanisms]
Probab=35.26 E-value=59 Score=32.38 Aligned_cols=62 Identities=24% Similarity=0.423 Sum_probs=36.0
Q ss_pred ceEEEEEEeCcccccccccCCCCCcCCCCCCCcchHHHHHHHHHHHHHHHhhC-CCCEEEEEcCcccccCCCCCCh
Q 026017 150 EIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRKSYLANLLKQDVDSALKES-TAKWKIVVGHHTIKSSGHHGNT 224 (244)
Q Consensus 150 ~~~~fi~LDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~~WL~~~L~~~-~~~~~iv~~H~P~~~~~~~g~~ 224 (244)
=-.||+++|..-.+. .| + .+..+---.|.+|-+++.++.- ++.-.||++-|-+-.+|.||+.
T Consensus 210 lIAHfLGVDH~GHk~----GP-----d----H~~M~~KL~qmD~vI~~ii~~mdedTlLvVmGDHGMt~nGdHGGd 272 (895)
T KOG2126|consen 210 LIAHFLGVDHCGHKH----GP-----D----HPEMADKLVQMDRVINEIIKKMDEDTLLVVMGDHGMTDNGDHGGD 272 (895)
T ss_pred HHHHHhCcccccccC----CC-----C----CHHHHHHHHHHHHHHHHHHHHhccCeeEEEecCCCCCCCCCCCCc
Confidence 357899999875421 01 0 0111111234443344444442 5667889999999999999874
No 155
>PRK10834 vancomycin high temperature exclusion protein; Provisional
Probab=34.73 E-value=1.8e+02 Score=24.49 Aligned_cols=41 Identities=22% Similarity=0.358 Sum_probs=23.1
Q ss_pred EEEEEecCCC--CCCCCh---HHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 40 SFLVVGDWGR--RGAYNQ---TKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 40 ~f~~igD~~~--~~~~~q---~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
-++|+|=-.. .|.++. .++..+++-..+ .+..-++++||.-
T Consensus 47 ~ivVLGa~~~~~~g~ps~~l~~Rl~~A~~LYk~-gk~~~ilvSGg~~ 92 (239)
T PRK10834 47 VGVVLGTAKYYRTGVINQYYRYRIQGAINAYNS-GKVNYLLLSGDNA 92 (239)
T ss_pred EEEEcCCcccCCCCCcCHHHHHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 3677774221 122332 455555553333 6678899999974
No 156
>PF14979 TMEM52: Transmembrane 52
Probab=34.58 E-value=1.2e+02 Score=23.52 Aligned_cols=44 Identities=30% Similarity=0.409 Sum_probs=21.8
Q ss_pred hhHHHHHHHH-HH---HhhhhcccCC--CCCCccCCCCCCCCeEEEEEec
Q 026017 3 LTLIITFIAL-LG---SLYVFCPSSA--ELPWFEHPAKPDGSLSFLVVGD 46 (244)
Q Consensus 3 ~~~~~~~~~~-~~---~~~~~~~~~~--~~~~~~~p~~~~~~~~f~~igD 46 (244)
+.+++.|++| || +|+=+|-... .++..+-+....-+++++.+.+
T Consensus 24 Lill~~~llLLCG~ta~C~rfCClrk~~~~q~~~~~~~~P~~~TVia~D~ 73 (154)
T PF14979_consen 24 LILLIGFLLLLCGLTASCVRFCCLRKQAHTQTHEPPAPQPYEVTVIAVDS 73 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCCCCCceEEEEeccC
Confidence 3455555555 33 3332222222 2454544444556777777765
No 157
>PRK10241 hydroxyacylglutathione hydrolase; Provisional
Probab=34.57 E-value=45 Score=28.01 Aligned_cols=44 Identities=18% Similarity=0.372 Sum_probs=25.8
Q ss_pred EEEcCCcccCCCCC---CcchhhhHHHhhhhccCCCCCCceEEecCCCCCC
Q 026017 74 IISTGDNFYDDGLT---GVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (244)
Q Consensus 74 vl~~GDlvy~~G~~---~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (244)
++++||.++..|.. ..+-.++.+.++++. .++....+.|| |++.
T Consensus 122 ~lFtGDtlf~~g~gr~f~g~~~~~~~Sl~kl~---~l~~~t~i~pg-H~y~ 168 (251)
T PRK10241 122 YLFCGDTLFSGGCGRLFEGTASQMYQSLKKIN---ALPDDTLICCA-HEYT 168 (251)
T ss_pred cEEEcCeeccCCcCCCCCCCHHHHHHHHHHHH---cCCCCEEEECC-CCCh
Confidence 69999988655432 112234555554432 34555677788 9875
No 158
>TIGR03850 bind_CPR_0540 carbohydrate ABC transporter substrate-binding protein, CPR_0540 family. Members of this protein are the substrate-binding protein of a predicted carbohydrate transporter operon, together with permease subunits of ABC transporter homology families. This substrate-binding protein frequently co-occurs in genomes with a family of disaccharide phosphorylases, TIGR02336, suggesting that the molecule transported will include beta-D-galactopyranosyl-(1-3)-N-acetyl-D-glucosamine and related carbohydrates. Members of this family are sporadically strain by strain, often in species with a human host association, including Propionibacterium acnes and Clostridium perfringens, and Bacillus cereus.
Probab=34.55 E-value=2.1e+02 Score=25.65 Aligned_cols=35 Identities=14% Similarity=0.093 Sum_probs=17.3
Q ss_pred HHHHHHHhhhhcccCCCCCCccCCCCCCCCeEEEEEec
Q 026017 9 FIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGD 46 (244)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~f~~igD 46 (244)
.+++++++.++|++++.-. ...+.+..++|...++
T Consensus 9 ~~~~~~~~l~gCg~~~~~~---~~~~~~~~i~~~~~~~ 43 (437)
T TIGR03850 9 ALAMAASSLAGCGSGTADG---ASTGEEVTLKVAAFEG 43 (437)
T ss_pred HHHHHHHHHhhccCCCCCC---CCCCCCceEEEEEecC
Confidence 3333444556776654311 1122445678876644
No 159
>PF02419 PsbL: PsbL protein; InterPro: IPR003372 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbL found in PSII. PsbL is located in a gene cluster with PsbE, PsbF and PsbJ (PsbEFJL). Both PsbL and PsbJ (IPR002682 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbL prevent the formation of both PSII core dimers and PSII-light harvesting complex []. In addition, both PsbL and PsbJ are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_L 3A0B_l 3ARC_l 1S5L_l 2AXT_l 3BZ2_L 4FBY_L 3PRQ_L 3PRR_L 3KZI_L ....
Probab=33.80 E-value=47 Score=19.11 Aligned_cols=16 Identities=31% Similarity=0.391 Sum_probs=10.8
Q ss_pred chhHHHHHHHHHHHhh
Q 026017 2 SLTLIITFIALLGSLY 17 (244)
Q Consensus 2 ~~~~~~~~~~~~~~~~ 17 (244)
|+|+-.+.|++++++.
T Consensus 16 SLY~GLllifvl~vLF 31 (37)
T PF02419_consen 16 SLYWGLLLIFVLAVLF 31 (37)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh
Confidence 5777777777776553
No 160
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=33.61 E-value=2.6e+02 Score=25.51 Aligned_cols=16 Identities=13% Similarity=-0.101 Sum_probs=13.9
Q ss_pred CCCceEEecCCCCCCC
Q 026017 107 LAKQWYNVLGNHDYRG 122 (244)
Q Consensus 107 l~iP~~~v~GNHD~~~ 122 (244)
.++|.++.||.-|.-+
T Consensus 269 ~GIP~Vvs~GalDmVn 284 (403)
T PF06792_consen 269 AGIPQVVSPGALDMVN 284 (403)
T ss_pred cCCCEEEecCccceec
Confidence 4899999999999754
No 161
>PRK14758 hypothetical protein; Provisional
Probab=32.66 E-value=51 Score=17.46 Aligned_cols=14 Identities=14% Similarity=0.401 Sum_probs=6.8
Q ss_pred hhHHHHHHHHHHHh
Q 026017 3 LTLIITFIALLGSL 16 (244)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (244)
|-+|.+.+.||+++
T Consensus 7 FEliLivlIlCali 20 (27)
T PRK14758 7 FEFILIILILCALI 20 (27)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444555554
No 162
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=31.85 E-value=39 Score=31.20 Aligned_cols=75 Identities=19% Similarity=0.286 Sum_probs=41.2
Q ss_pred CCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCC-CEEEEcCCcccCCCCCCcchhhhHHHhhhhccCC-CCCCceE
Q 026017 35 PDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWY 112 (244)
Q Consensus 35 ~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~p-dfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~-~l~iP~~ 112 (244)
..+..++.+.||+|+ +-++. .+.+..... .++ .--++.||++ +.|..+..- . ..++... ...--+|
T Consensus 210 ~~~d~~~sv~gd~hG-qfydl---~nif~l~g~-Ps~t~~ylfngdfv-~rgs~s~e~--~----~~~~~~kl~~pn~~f 277 (476)
T KOG0376|consen 210 VPGDVKISVCGDTHG-QFYDL---LNIFELNGL-PSETNPYLFNGDFV-DRGSWSVEV--I----LTLFAFKLLYPNNFF 277 (476)
T ss_pred cCCCceEEecCCccc-cccch---hhhHhhcCC-CCCcccccccCcee-eecccceee--e----eeehhhcccCCccee
Confidence 566789999999995 22222 222222111 222 3478999999 666543211 0 1111111 1234599
Q ss_pred EecCCCCCC
Q 026017 113 NVLGNHDYR 121 (244)
Q Consensus 113 ~v~GNHD~~ 121 (244)
...||||..
T Consensus 278 l~rgn~Es~ 286 (476)
T KOG0376|consen 278 LLRGNHESD 286 (476)
T ss_pred eccCCccch
Confidence 999999865
No 163
>COG3521 Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.77 E-value=1.4e+02 Score=23.43 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhcccCCCCCCccCCCCCCCCeEEEEEecCCC
Q 026017 7 ITFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGR 49 (244)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~f~~igD~~~ 49 (244)
++-++++.++ .+|+||.+. .| ...+++-+.++...
T Consensus 8 ~~~l~al~~~-sgCsss~~~----~p---p~~l~l~l~a~~~~ 42 (159)
T COG3521 8 VLALFALLVL-SGCSSSKPL----LP---PSRLDLTLTAAPDL 42 (159)
T ss_pred HHHHHHHHHh-hhhccCCCC----CC---CcEEEEEEEecCCc
Confidence 3334443333 677888777 23 34555666665443
No 164
>PRK14345 lipoate-protein ligase B; Provisional
Probab=30.99 E-value=1.1e+02 Score=25.62 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEEcCcccccCCCCCC
Q 026017 188 ANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGN 223 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~~g~ 223 (244)
+-|.+ +.++..+....+.++++-|.|.|..|.++.
T Consensus 27 ~~Q~~-l~~~~~~~~~~d~llllEH~pVyT~Gr~~~ 61 (234)
T PRK14345 27 DLQRE-LADARVAGEGPDTLLLLEHPAVYTAGKRTE 61 (234)
T ss_pred HHHHH-HHHHHhcCCCCCEEEEEcCCCCccCCCCCC
Confidence 45656 666655544567889999999999887654
No 165
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=30.95 E-value=1.1e+02 Score=27.10 Aligned_cols=45 Identities=20% Similarity=0.196 Sum_probs=27.6
Q ss_pred HHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEE-ecCCCCC
Q 026017 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYN-VLGNHDY 120 (244)
Q Consensus 62 i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~-v~GNHD~ 120 (244)
+.++.++.+||+|+..||-. ..+....... .+++|+.+ --|++-.
T Consensus 85 ~~~~~~~~~Pd~vlv~GD~~----------~~la~alaA~----~~~IPv~HveaG~rs~ 130 (365)
T TIGR03568 85 FSDAFERLKPDLVVVLGDRF----------EMLAAAIAAA----LLNIPIAHIHGGEVTE 130 (365)
T ss_pred HHHHHHHhCCCEEEEeCCch----------HHHHHHHHHH----HhCCcEEEEECCccCC
Confidence 44455558999999999964 1233233322 35899994 4555644
No 166
>PRK10781 rcsF outer membrane lipoprotein; Reviewed
Probab=30.88 E-value=78 Score=24.06 Aligned_cols=27 Identities=19% Similarity=0.108 Sum_probs=18.2
Q ss_pred CchhHHHHHHHHHHHhhhhcccCCCCC
Q 026017 1 MSLTLIITFIALLGSLYVFCPSSAELP 27 (244)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (244)
||..++.++..+|.-|+.+...+.+-+
T Consensus 1 MR~l~~~LL~L~LsGCS~l~~tp~ppp 27 (133)
T PRK10781 1 MRALPICLLALMLTGCSMLSRSPVEPV 27 (133)
T ss_pred CchHHHHHHHHHHhhccccCcCCCCCC
Confidence 677666666666788887776655443
No 167
>PF15339 Afaf: Acrosome formation-associated factor
Probab=29.81 E-value=45 Score=26.46 Aligned_cols=13 Identities=23% Similarity=0.237 Sum_probs=6.1
Q ss_pred HHHHHHHHHhhhh
Q 026017 7 ITFIALLGSLYVF 19 (244)
Q Consensus 7 ~~~~~~~~~~~~~ 19 (244)
++|+.||++|+++
T Consensus 142 ~lfv~Ll~~c~at 154 (200)
T PF15339_consen 142 FLFVILLAFCSAT 154 (200)
T ss_pred HHHHHHHHHHHHH
Confidence 3344445555543
No 168
>COG2949 SanA Uncharacterized membrane protein [Function unknown]
Probab=29.64 E-value=2.7e+02 Score=23.07 Aligned_cols=25 Identities=16% Similarity=0.444 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 56 TKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 56 ~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
.++..+.+...+ .|.+-++..||+.
T Consensus 80 ~Ri~aA~~ly~~-gKV~~LLlSGDN~ 104 (235)
T COG2949 80 YRIDAAIALYKA-GKVNYLLLSGDNA 104 (235)
T ss_pred HHHHHHHHHHhc-CCeeEEEEecCCC
Confidence 455555555444 7999999999987
No 169
>COG2237 Predicted membrane protein [Function unknown]
Probab=29.46 E-value=1.4e+02 Score=26.67 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=33.3
Q ss_pred CCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcc
Q 026017 36 DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (244)
Q Consensus 36 ~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlv 81 (244)
.++.-+++++-.+..|...+..+.+.++.+.+..+||.++...|=.
T Consensus 64 geDveIA~vsG~~~vgv~sd~~l~~qld~vl~~~~pd~av~VsDGa 109 (364)
T COG2237 64 GEDVEIAVVSGDKDVGVESDLKLSEQLDEVLSELDPDDAVVVSDGA 109 (364)
T ss_pred CCceEEEEEecCCCcchhhHHHHHHHHHHHHHcCCCcEEEEeccCc
Confidence 3577777776544335555677888888887778999999988854
No 170
>PRK13183 psbN photosystem II reaction center protein N; Provisional
Probab=29.21 E-value=67 Score=19.58 Aligned_cols=10 Identities=50% Similarity=0.727 Sum_probs=6.3
Q ss_pred hhcccCCCCC
Q 026017 18 VFCPSSAELP 27 (244)
Q Consensus 18 ~~~~~~~~~~ 27 (244)
+++|-|.++.
T Consensus 29 aFGppSk~Lr 38 (46)
T PRK13183 29 AFGPPSKELD 38 (46)
T ss_pred ccCCcccccC
Confidence 6677666653
No 171
>PRK14348 lipoate-protein ligase B; Provisional
Probab=29.05 E-value=1.4e+02 Score=24.76 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhhC-----CCCEEEEEcCcccccCCCCCCh
Q 026017 187 LANLLKQDVDSALKES-----TAKWKIVVGHHTIKSSGHHGNT 224 (244)
Q Consensus 187 ~~~Ql~~WL~~~L~~~-----~~~~~iv~~H~P~~~~~~~g~~ 224 (244)
.+.|.+ |.++..+.. ..+.++++-|.|.|..|..+..
T Consensus 17 ~~~q~~-~~~~~~~~~~~~~~~~d~llllEH~pVyT~G~~~~~ 58 (221)
T PRK14348 17 WSRQTE-WFDALVHAKQNGESYENRIIFCEHPHVYTLGRSGKE 58 (221)
T ss_pred HHHHHH-HHHHHHhhhhcCCCCCCEEEEEcCCCCeeCCcCCCc
Confidence 345666 666554331 1368999999999999877654
No 172
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=28.19 E-value=1.1e+02 Score=25.20 Aligned_cols=13 Identities=15% Similarity=0.041 Sum_probs=10.7
Q ss_pred CCceEEecCCCCC
Q 026017 108 AKQWYNVLGNHDY 120 (244)
Q Consensus 108 ~iP~~~v~GNHD~ 120 (244)
++|+++++||.--
T Consensus 4 g~pVlFIhG~~Gs 16 (225)
T PF07819_consen 4 GIPVLFIHGNAGS 16 (225)
T ss_pred CCEEEEECcCCCC
Confidence 6899999997653
No 173
>PF02323 ELH: Egg-laying hormone precursor ; InterPro: IPR003424 This family consists of egg-laying hormone (ELH) precursor and atrial gland peptides from the little (Aplysia parvula) and california (Aplysia californica) sea hares. The family also includes ovulation prohormone precursor from the great pond snail (Lymnaea stagnalis). This family thus represents a conserved gastropoda ovulation and egg production prohormone. Note that many of the proteins present are further cleaved to give individual peptides []. Neuropeptidergic bag cells of the marine mollusc A. californica synthesize an egg-laying hormone (ELH) precursor protein which is cleaved to generate several bioacitve peptides including ELH, bag cell peptides (BCP) and acidic peptide (AP) [].; GO: 0005179 hormone activity, 0007275 multicellular organismal development, 0005576 extracellular region
Probab=27.88 E-value=36 Score=27.83 Aligned_cols=21 Identities=29% Similarity=0.371 Sum_probs=15.5
Q ss_pred HHHHHHHHHhhhhcccCCCCC
Q 026017 7 ITFIALLGSLYVFCPSSAELP 27 (244)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ 27 (244)
|.||++|..|+.+|.+|..+.
T Consensus 11 ~mfvi~Cl~lSslc~ss~S~s 31 (255)
T PF02323_consen 11 TMFVILCLWLSSLCVSSQSIS 31 (255)
T ss_pred hhHHHHHHHHhhhhhhhhhhh
Confidence 557888888887777776653
No 174
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=26.95 E-value=1.3e+02 Score=25.76 Aligned_cols=43 Identities=26% Similarity=0.317 Sum_probs=30.0
Q ss_pred CCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCC
Q 026017 36 DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDG 85 (244)
Q Consensus 36 ~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G 85 (244)
.++.+|++.+|+++ .-+. ++++-+.+ ..|+.++..|=.+|--|
T Consensus 174 dg~~~i~faSDvqG--p~~~----~~l~~i~e-~~P~v~ii~GPpty~lg 216 (304)
T COG2248 174 DGKSSIVFASDVQG--PIND----EALEFILE-KRPDVLIIGGPPTYLLG 216 (304)
T ss_pred cCCeEEEEcccccC--CCcc----HHHHHHHh-cCCCEEEecCCchhHhh
Confidence 56789999999874 2222 23343444 69999999999996544
No 175
>PRK13738 conjugal transfer pilus assembly protein TraW; Provisional
Probab=26.45 E-value=1.1e+02 Score=25.15 Aligned_cols=22 Identities=9% Similarity=0.009 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhhC-CCCEEEEE
Q 026017 188 ANLLKQDVDSALKES-TAKWKIVV 210 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~~-~~~~~iv~ 210 (244)
++|++ |.++..+.. ..+++++.
T Consensus 131 ~~Qv~-wak~~~~~~~~~k~ILv~ 153 (209)
T PRK13738 131 PAQVA-WMKRQTPPTLESKIILVQ 153 (209)
T ss_pred HHHHH-HHHHhhhccCCceEEEEC
Confidence 58999 999876654 44544444
No 176
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=26.17 E-value=1e+02 Score=28.70 Aligned_cols=48 Identities=27% Similarity=0.455 Sum_probs=27.9
Q ss_pred HHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCC
Q 026017 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (244)
Q Consensus 62 i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (244)
+....++.-.|-+-+.||+ |+.|... ....+.+.. ..++. .-+||||.
T Consensus 182 la~~iqrLvVDhLHiVGDI-yDRGP~p---d~Imd~L~~---yhsvD----iQWGNHDi 229 (648)
T COG3855 182 LAYLIQRLVVDHLHIVGDI-YDRGPYP---DKIMDTLIN---YHSVD----IQWGNHDI 229 (648)
T ss_pred HHHHHHHHhhhheeeeccc-ccCCCCc---hHHHHHHhh---ccccc----ccccCcce
Confidence 3333344678999999997 4888653 122332222 22333 35799996
No 177
>COG5510 Predicted small secreted protein [Function unknown]
Probab=25.92 E-value=78 Score=19.04 Aligned_cols=20 Identities=30% Similarity=0.609 Sum_probs=10.3
Q ss_pred CchhHHHHHHHHHH-Hhhhhc
Q 026017 1 MSLTLIITFIALLG-SLYVFC 20 (244)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~ 20 (244)
|..++++.+++|++ .+...|
T Consensus 2 mk~t~l~i~~vll~s~llaaC 22 (44)
T COG5510 2 MKKTILLIALVLLASTLLAAC 22 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHh
Confidence 45556666666643 333444
No 178
>PHA02973 hypothetical protein; Provisional
Probab=25.35 E-value=64 Score=23.16 Aligned_cols=16 Identities=44% Similarity=0.569 Sum_probs=11.0
Q ss_pred hHHHHHHHHHHHhhhh
Q 026017 4 TLIITFIALLGSLYVF 19 (244)
Q Consensus 4 ~~~~~~~~~~~~~~~~ 19 (244)
.+++.||+.|++||++
T Consensus 3 ~~l~fFi~FL~l~Y~f 18 (102)
T PHA02973 3 FLIFFFILFLLLCYFF 18 (102)
T ss_pred hHHHHHHHHHHHHHHh
Confidence 4566677667777765
No 179
>COG5214 POL12 DNA polymerase alpha-primase complex, polymerase-associated subunit B [DNA replication, recombination, and repair]
Probab=25.17 E-value=4.4e+02 Score=24.29 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=56.6
Q ss_pred cccCCCCCCccCCCCCCCCeEEEEEecC-CCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccC------CCCC-Ccch
Q 026017 20 CPSSAELPWFEHPAKPDGSLSFLVVGDW-GRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYD------DGLT-GVDD 91 (244)
Q Consensus 20 ~~~~~~~~~~~~p~~~~~~~~f~~igD~-~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~------~G~~-~~~~ 91 (244)
+++++|.+.|..- .+..+.++++.+.. +.+....-+.+.+++..+++ .+.|.++..|=++.- .|.. +..+
T Consensus 287 ~s~~qE~~~fqan-~~~q~~~iv~~sGPy~~~dd~s~~pl~~~id~vn~-n~vdvlIl~GPFidi~h~li~~G~~~~t~~ 364 (581)
T COG5214 287 ASDGQEKKYFQAN-TNNQPTSIVAFSGPYGPRDDLSGSPLFDAIDRVNA-NDVDVLILIGPFIDINHILIQYGATQSTPD 364 (581)
T ss_pred Ccchhhhhhhccc-cCCCceEEEEEcCCCCCccccCcChHHHHHHHhcc-CCccEEEEeccccCcchhhhhhCCCCCCCh
Confidence 4455666667643 45667777777663 22222233567788888887 688999999987632 1221 2122
Q ss_pred hhhHHHhhhhcc--CCCCCCc-eEEecCCCCCC
Q 026017 92 AAFFESFVNIYT--APSLAKQ-WYNVLGNHDYR 121 (244)
Q Consensus 92 ~~~~~~~~~~~~--~~~l~iP-~~~v~GNHD~~ 121 (244)
..+.+.|....+ +.....| .+.+|--.|..
T Consensus 365 ~~l~ElF~~r~tpiL~~~~~p~~vLIPstnDa~ 397 (581)
T COG5214 365 SMLKELFIPRITPILDRNAGPKAVLIPSTNDAT 397 (581)
T ss_pred hHHHHHHHHhhhHHHhccCCCceEEeccccchh
Confidence 334444433222 2333456 67777666654
No 180
>PF02468 PsbN: Photosystem II reaction centre N protein (psbN); InterPro: IPR003398 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbN found in PSII. PsbN may have a role in PSII stability, however its actual function unknown. PsbN does not appear to be essential for photoautotrophic growth or normal PSII function.; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane
Probab=25.08 E-value=66 Score=19.34 Aligned_cols=10 Identities=50% Similarity=0.720 Sum_probs=7.0
Q ss_pred hhcccCCCCC
Q 026017 18 VFCPSSAELP 27 (244)
Q Consensus 18 ~~~~~~~~~~ 27 (244)
+++|.|.++.
T Consensus 26 aFGppSk~Lr 35 (43)
T PF02468_consen 26 AFGPPSKELR 35 (43)
T ss_pred eeCCCccccC
Confidence 7777777664
No 181
>PRK00753 psbL photosystem II reaction center L; Provisional
Probab=24.55 E-value=86 Score=18.16 Aligned_cols=16 Identities=38% Similarity=0.580 Sum_probs=10.7
Q ss_pred chhHHHHHHHHHHHhh
Q 026017 2 SLTLIITFIALLGSLY 17 (244)
Q Consensus 2 ~~~~~~~~~~~~~~~~ 17 (244)
|+|+-.+.|++++++.
T Consensus 18 SLy~GlLlifvl~vLF 33 (39)
T PRK00753 18 SLYLGLLLVFVLGILF 33 (39)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5677777777776553
No 182
>PRK14344 lipoate-protein ligase B; Provisional
Probab=24.38 E-value=2e+02 Score=23.92 Aligned_cols=36 Identities=6% Similarity=0.020 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhhC-CCCEEEEEcCcccccCCCCCCh
Q 026017 188 ANLLKQDVDSALKES-TAKWKIVVGHHTIKSSGHHGNT 224 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~~-~~~~~iv~~H~P~~~~~~~g~~ 224 (244)
+.|.+ +.++..+.. ..+.++++-|.|.|..|..+..
T Consensus 34 ~~Q~~-~~~~~~~~~~~~d~llllEH~pVyT~G~~~~~ 70 (223)
T PRK14344 34 KWQKE-WQQALIEDPSNPQAVWLLEHQLCYTLGRGASE 70 (223)
T ss_pred HHHHH-HHHHHhcCCCCCCEEEEECCCCCeeCCCCCCh
Confidence 44555 655544432 3578899999999998876653
No 183
>TIGR01495 ETRAMP Plasmodium ring stage membrane protein ETRAMP. These genes have been shown to be found in the sub-telomeric regions of both P. falciparum and P. yoelii chromosomes.
Probab=24.37 E-value=86 Score=21.83 Aligned_cols=23 Identities=26% Similarity=0.429 Sum_probs=15.9
Q ss_pred CchhHHHHHHHHHHHhhhhcccC
Q 026017 1 MSLTLIITFIALLGSLYVFCPSS 23 (244)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (244)
|.++-+.+|+++|..+-+++|.+
T Consensus 1 MKisKi~~f~~~Ll~in~~~p~~ 23 (85)
T TIGR01495 1 MKVSKILYFFAALLAINFIAPGY 23 (85)
T ss_pred CchhHHHHHHHHHHHHHhCcccc
Confidence 78888888888865445555443
No 184
>PRK15453 phosphoribulokinase; Provisional
Probab=22.52 E-value=2.4e+02 Score=24.46 Aligned_cols=43 Identities=23% Similarity=0.309 Sum_probs=30.1
Q ss_pred CCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccC
Q 026017 37 GSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYD 83 (244)
Q Consensus 37 ~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~ 83 (244)
...-+++.|+.|. | ...+++++.++........++..||..|.
T Consensus 4 k~piI~ItG~SGs-G---KTTva~~l~~if~~~~~~~~vi~~D~yh~ 46 (290)
T PRK15453 4 KHPIIAVTGSSGA-G---TTTVKRAFEKIFRRENINAAVVEGDSFHR 46 (290)
T ss_pred CCcEEEEECCCCC-C---HHHHHHHHHHHHhhcCCCeEEEecccccc
Confidence 3456888888774 3 45667777655444566789999999874
No 185
>CHL00038 psbL photosystem II protein L
Probab=22.18 E-value=1e+02 Score=17.78 Aligned_cols=15 Identities=33% Similarity=0.304 Sum_probs=9.6
Q ss_pred chhHHHHHHHHHHHh
Q 026017 2 SLTLIITFIALLGSL 16 (244)
Q Consensus 2 ~~~~~~~~~~~~~~~ 16 (244)
|+|+=.+.|++++++
T Consensus 17 SLy~GLLlifvl~vl 31 (38)
T CHL00038 17 SLYWGLLLIFVLAVL 31 (38)
T ss_pred hHHHHHHHHHHHHHH
Confidence 566666667766554
No 186
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex. Pyruvate dehydrogenase (1.2.4.1 from EC), a component of the multienzyme pyruvate dehydrogenase complex; 2-oxoglutarate dehydrogenase (1.2.4.2 from EC), a component of the multienzyme 2-oxoglutarate dehydrogenase which contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3); and 2-oxoisovalerate dehydrogenase (1.2.4.4 from EC), a component of the multienzyme branched-chain alpha-keto dehydrogenase complex all belong to this family.; GO: 0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 0008152 metabolic process; PDB: 1X7Y_A 1V1M_A 1X7W_A 1OLU_A 2J9F_A 2BEW_A 1V11_A 2BFE_A 1U5B_A 2BEU_A ....
Probab=21.68 E-value=69 Score=27.75 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=40.7
Q ss_pred CCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhc-cCCCCCCceEE
Q 026017 35 PDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIY-TAPSLAKQWYN 113 (244)
Q Consensus 35 ~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~-~~~~l~iP~~~ 113 (244)
.++.+.++++||- ..+|..+.++|+-.+- .+.-.|++.=|+-|.-.++. .-+..-..+. ....+++|.+.
T Consensus 121 ~~~~v~v~~~GDg----a~~qG~~~EalN~A~~-~~lPvifvveNN~~aist~~----~~~~~~~~~~~~a~~~gip~~~ 191 (300)
T PF00676_consen 121 GKDGVVVCFFGDG----ATSQGDFHEALNLAAL-WKLPVIFVVENNQYAISTPT----EEQTASPDIADRAKGYGIPGIR 191 (300)
T ss_dssp TSSEEEEEEEETG----GGGSHHHHHHHHHHHH-TTTSEEEEEEEESEETTEEH----HHHCSSSTSGGGGGGTTSEEEE
T ss_pred CCceeEEEEecCc----ccccCccHHHHHHHhh-ccCCeEEEEecCCcccccCc----cccccccchhhhhhccCCcEEE
Confidence 4667888888882 2356677777774322 56666777777665433211 1011101111 12345788888
Q ss_pred ecCCC
Q 026017 114 VLGNH 118 (244)
Q Consensus 114 v~GNH 118 (244)
|=||.
T Consensus 192 VDG~D 196 (300)
T PF00676_consen 192 VDGND 196 (300)
T ss_dssp EETTS
T ss_pred ECCEe
Confidence 88764
No 187
>PF02238 COX7a: Cytochrome c oxidase subunit VIIa; InterPro: IPR003177 Cytochrome c oxidase (1.9.3.1 from EC) is an oligomeric enzymatic complex which is a component of the respiratory chain complex and is involved in the transfer of electrons from cytochrome c to oxygen []. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. In eukaryotes, in addition to the three large subunits, I, II and III, that form the catalytic centre of the enzyme complex, there are a variable number of small polypeptidic subunits. This family is composed of the heart and liver isoforms of cytochrome c oxidase subunit VIIa. ; GO: 0004129 cytochrome-c oxidase activity, 0009055 electron carrier activity, 0005746 mitochondrial respiratory chain; PDB: 2DYS_J 3AG3_W 3AG1_J 1OCC_J 3ABL_J 3AG4_J 3ABM_J 2EIL_W 3AG2_W 2EIM_W ....
Probab=21.44 E-value=1.1e+02 Score=19.61 Aligned_cols=17 Identities=18% Similarity=0.350 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHhhhh
Q 026017 3 LTLIITFIALLGSLYVF 19 (244)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (244)
+|+++..+.+.|+++|+
T Consensus 29 Ly~~Tm~L~~~gt~~~l 45 (56)
T PF02238_consen 29 LYRVTMPLTVAGTSYCL 45 (56)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57777777777777765
No 188
>PTZ00459 mucin-associated surface protein (MASP); Provisional
Probab=21.42 E-value=54 Score=28.40 Aligned_cols=6 Identities=0% Similarity=-0.214 Sum_probs=3.1
Q ss_pred HHHHhh
Q 026017 12 LLGSLY 17 (244)
Q Consensus 12 ~~~~~~ 17 (244)
||+||+
T Consensus 12 VCALCV 17 (291)
T PTZ00459 12 VCALCV 17 (291)
T ss_pred HHHHHH
Confidence 355555
No 189
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.24 E-value=1.3e+02 Score=28.10 Aligned_cols=46 Identities=15% Similarity=0.278 Sum_probs=32.9
Q ss_pred ccCCCCCCCCeEEEEEecCCCCCCCChHHHHHHHHHHHhhcCCCEEEEcCCc
Q 026017 29 FEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDN 80 (244)
Q Consensus 29 ~~~p~~~~~~~~f~~igD~~~~~~~~q~~v~~~i~~i~~~~~pdfvl~~GDl 80 (244)
...||... .+=++|..|..+.. ...+.+.+++++..|-+-+++|-.
T Consensus 25 ~~lPPGP~---~lPiIGnl~~l~~~---~~h~~~~~ls~~yGpi~tl~lG~~ 70 (489)
T KOG0156|consen 25 RNLPPGPP---PLPIIGNLHQLGSL---PPHRSFRKLSKKYGPVFTLRLGSV 70 (489)
T ss_pred CCCCcCCC---CCCccccHHHcCCC---chhHHHHHHHHHhCCeEEEEecCc
Confidence 55565433 57788998754433 456677778888999999999985
No 190
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=21.17 E-value=1.6e+02 Score=24.80 Aligned_cols=54 Identities=13% Similarity=0.035 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhhcCCCEEEEcCCcccCCCCCCcchhhhHHHhhhhccCCCCCCceEEecCCCCC
Q 026017 56 TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (244)
Q Consensus 56 ~~v~~~i~~i~~~~~pdfvl~~GDlvy~~G~~~~~~~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (244)
+++.+.|.+..++.+-=.=+|.||..- |-...+++..+..++||+-.+||=--+
T Consensus 62 eeIi~~m~~a~~~Gk~VvRLhSGDpsi-----------YgA~~EQm~~L~~~gI~yevvPGVss~ 115 (254)
T COG2875 62 EEIIDLMVDAVREGKDVVRLHSGDPSI-----------YGALAEQMRELEALGIPYEVVPGVSSF 115 (254)
T ss_pred HHHHHHHHHHHHcCCeEEEeecCChhH-----------HHHHHHHHHHHHHcCCCeEEeCCchHH
Confidence 344444544333234445689999761 222334443345678999999996543
No 191
>PRK14346 lipoate-protein ligase B; Provisional
Probab=21.01 E-value=2.4e+02 Score=23.56 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEEcCcccccCCCCCC
Q 026017 188 ANLLKQDVDSALKESTAKWKIVVGHHTIKSSGHHGN 223 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~~~~~~~iv~~H~P~~~~~~~g~ 223 (244)
+.|.+ +.+.. .....+.++++-|.|.|..|..+.
T Consensus 18 ~~q~~-~~~~~-~~~~~d~llllEHppVyT~G~~~~ 51 (230)
T PRK14346 18 QAMQA-FTAER-TPETPDELWICEHPPVYTQGLAGK 51 (230)
T ss_pred HHHHH-HHHHh-hCCCCCEEEEEcCCCCeeCCCCCC
Confidence 45656 65553 223457889999999999887654
No 192
>PF01470 Peptidase_C15: Pyroglutamyl peptidase This is family C15 in the peptidase classification. ; InterPro: IPR000816 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C15 (pyroglutamyl peptidase I, clan CF). The type example being pyroglutamyl peptidase I of Bacillus amyloliquefaciens. Pyroglutamyl/pyrrolidone carboxyl peptidase (Pcp or PYRase) is an exopeptidase that hydrolytically removes the pGlu from pGlu-peptides or pGlu-proteins [, ]. PYRase has been found in prokaryotes and eukaryotes where at least two different classes have been characterised: the first containing bacterial and animal type I PYRases, and the second containing animal type II and serum PYRases. Type I and bacterial PYRases are soluble enzymes, while type II PYRases are membrane-bound. The primary application of PYRase has been its utilisation for protein or peptide sequencing, and bacterial diagnosis []. The conserved residues Cys-144 and His-168 have been identified by inhibition and mutagenesis studies [, ].; GO: 0006508 proteolysis; PDB: 1A2Z_A 1IU8_A 3RNZ_A 3RO0_D 1AUG_D 2EBJ_A 3LAC_A 1X12_B 1Z8X_B 1X10_C ....
Probab=20.51 E-value=93 Score=25.25 Aligned_cols=24 Identities=21% Similarity=0.216 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhhcCCCEEEEcCCc
Q 026017 57 KVAHQMGIVGEKLKIDFIISTGDN 80 (244)
Q Consensus 57 ~v~~~i~~i~~~~~pdfvl~~GDl 80 (244)
.+.+.+.++.++.+||+||++|=-
T Consensus 47 ~~~~~l~~~l~~~~PdlVIhlGva 70 (202)
T PF01470_consen 47 KAFEALEELLEEHQPDLVIHLGVA 70 (202)
T ss_dssp HHHHHHHHHHHHH--SEEEEEEE-
T ss_pred hHHHHHHHHHHhcCCcEEEEEeec
Confidence 344555544444799999999964
No 193
>COG4704 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.29 E-value=2.1e+02 Score=21.88 Aligned_cols=45 Identities=11% Similarity=0.101 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCccC--C--CCCCCCeEEEEEecCCC
Q 026017 5 LIITFIALLGSLYVFCPSSAELPWFEH--P--AKPDGSLSFLVVGDWGR 49 (244)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--p--~~~~~~~~f~~igD~~~ 49 (244)
++++..+++.++...+..++.+.+++. + .+.++.+.|.++.+.++
T Consensus 8 ~l~Ll~aa~sL~~~~aaaaeatgkLTvti~glknkqGqic~aVf~s~qg 56 (151)
T COG4704 8 RLFLLAAALSLVSLKAAAAEATGKLTVTINGLKNKQGQICFAVFASEQG 56 (151)
T ss_pred HHHHHHHHHHHHhHHHHHHhhcCceEEEEcchhhccCcEEEEEEecccc
Confidence 333334444444555666666666554 2 25678899999999653
No 194
>TIGR01732 tiny_TM_bacill conserved hypothetical tiny transmembrane protein. This model represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=20.12 E-value=92 Score=16.50 Aligned_cols=9 Identities=33% Similarity=0.862 Sum_probs=4.3
Q ss_pred HHHHHHHHH
Q 026017 5 LIITFIALL 13 (244)
Q Consensus 5 ~~~~~~~~~ 13 (244)
++++||.|.
T Consensus 11 ivVLFILLI 19 (26)
T TIGR01732 11 IVVLFILLV 19 (26)
T ss_pred HHHHHHHHH
Confidence 344555543
No 195
>TIGR02743 TraW type-F conjugative transfer system protein TraW. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=20.10 E-value=1.6e+02 Score=24.11 Aligned_cols=14 Identities=14% Similarity=0.067 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHhhC
Q 026017 188 ANLLKQDVDSALKES 202 (244)
Q Consensus 188 ~~Ql~~WL~~~L~~~ 202 (244)
++|++ |.++..+..
T Consensus 133 ~~Qv~-wa~~~~~~~ 146 (202)
T TIGR02743 133 PEQLA-WAQQQLPSC 146 (202)
T ss_pred HHHHH-HHHHhcccC
Confidence 58999 999877654
No 196
>PF15240 Pro-rich: Proline-rich
Probab=20.03 E-value=1e+02 Score=24.69 Aligned_cols=27 Identities=15% Similarity=0.112 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCccC
Q 026017 5 LIITFIALLGSLYVFCPSSAELPWFEH 31 (244)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (244)
||||+.|.|..++..-...+++..-.+
T Consensus 2 LlVLLSvALLALSSAQ~~dEdv~~e~~ 28 (179)
T PF15240_consen 2 LLVLLSVALLALSSAQSTDEDVSQEES 28 (179)
T ss_pred hhHHHHHHHHHhhhccccccccccccC
Confidence 566666665445555555666654433
Done!