Query 026021
Match_columns 244
No_of_seqs 131 out of 1336
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 03:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026021.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026021hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mil_A Isoamyl acetate-hydroly 100.0 6.5E-34 2.2E-38 226.1 22.0 220 3-239 4-235 (240)
2 4hf7_A Putative acylhydrolase; 100.0 3.7E-33 1.3E-37 218.0 15.1 180 3-216 27-208 (209)
3 4h08_A Putative hydrolase; GDS 100.0 2.8E-32 9.4E-37 211.4 17.0 177 2-216 20-197 (200)
4 1yzf_A Lipase/acylhydrolase; s 100.0 5.8E-32 2E-36 208.0 18.2 181 1-216 1-189 (195)
5 3dci_A Arylesterase; SGNH_hydr 100.0 6.4E-32 2.2E-36 214.2 15.3 181 3-216 24-229 (232)
6 2q0q_A ARYL esterase; SGNH hyd 100.0 1.5E-31 5.1E-36 209.4 15.6 184 1-215 1-214 (216)
7 3hp4_A GDSL-esterase; psychrot 100.0 8.3E-31 2.8E-35 200.4 14.8 173 1-216 1-181 (185)
8 3dc7_A Putative uncharacterize 100.0 1.3E-30 4.5E-35 206.4 14.5 193 3-216 22-223 (232)
9 3p94_A GDSL-like lipase; serin 100.0 2E-30 6.7E-35 201.1 15.0 178 4-216 24-202 (204)
10 1ivn_A Thioesterase I; hydrola 100.0 8.6E-30 3E-34 195.7 18.1 174 3-218 2-179 (190)
11 3rjt_A Lipolytic protein G-D-S 100.0 1.4E-29 4.9E-34 197.6 15.9 185 3-214 9-214 (216)
12 1k7c_A Rhamnogalacturonan acet 100.0 9.7E-30 3.3E-34 201.8 13.9 189 4-220 2-219 (233)
13 2hsj_A Putative platelet activ 100.0 2E-29 6.8E-34 197.0 13.8 177 3-213 35-213 (214)
14 1vjg_A Putative lipase from th 100.0 3.6E-29 1.2E-33 196.3 13.6 180 3-211 21-209 (218)
15 1es9_A PAF-AH, platelet-activa 100.0 7.1E-29 2.4E-33 196.6 15.3 174 3-217 39-216 (232)
16 3bzw_A Putative lipase; protei 100.0 7E-29 2.4E-33 201.5 14.4 197 3-216 27-262 (274)
17 1fxw_F Alpha2, platelet-activa 100.0 1.1E-28 3.9E-33 195.1 13.8 174 3-217 40-217 (229)
18 3skv_A SSFX3; jelly roll, GDSL 100.0 1.8E-27 6.1E-32 200.7 16.0 188 2-219 185-381 (385)
19 2o14_A Hypothetical protein YX 99.9 5.6E-27 1.9E-31 197.9 16.3 184 3-217 163-363 (375)
20 2vpt_A Lipolytic enzyme; ester 99.9 6.8E-28 2.3E-32 188.8 8.8 167 4-216 7-198 (215)
21 1esc_A Esterase; 2.10A {Strept 99.9 1.6E-25 5.4E-30 184.5 9.7 203 4-216 7-303 (306)
22 2wao_A Endoglucanase E; plant 99.9 8.3E-24 2.9E-28 176.7 13.1 180 3-216 123-330 (341)
23 2waa_A Acetyl esterase, xylan 99.9 1.9E-23 6.4E-28 174.8 13.5 175 3-216 133-336 (347)
24 2w9x_A AXE2A, CJCE2B, putative 99.9 1E-21 3.5E-26 165.4 13.0 181 3-216 143-356 (366)
25 4i8i_A Hypothetical protein; 5 99.4 1.1E-11 3.6E-16 99.3 16.4 194 4-216 12-226 (271)
26 3kvn_X Esterase ESTA; beta bar 99.4 2.8E-12 9.6E-17 115.1 13.6 134 71-214 145-317 (632)
27 1zmb_A Acetylxylan esterase re 98.5 7E-06 2.4E-10 66.3 15.9 168 22-223 60-234 (290)
28 2apj_A Putative esterase; AT4G 97.8 0.00097 3.3E-08 52.9 15.1 149 22-215 98-257 (260)
29 3bma_A D-alanyl-lipoteichoic a 97.6 0.00053 1.8E-08 57.5 11.2 95 103-216 275-371 (407)
30 3pt5_A NANS (YJHS), A 9-O-acet 96.3 0.009 3.1E-07 48.4 6.4 160 22-216 110-333 (337)
31 3nvb_A Uncharacterized protein 94.7 0.074 2.5E-06 44.4 6.8 186 4-216 24-217 (387)
32 3cfy_A Putative LUXO repressor 88.9 3.1 0.00011 28.3 8.5 83 1-129 3-86 (137)
33 4e7p_A Response regulator; DNA 88.9 3.2 0.00011 28.7 8.7 41 71-130 65-105 (150)
34 3kcn_A Adenylate cyclase homol 88.6 3.1 0.00011 28.8 8.5 81 3-129 5-86 (151)
35 1tmy_A CHEY protein, TMY; chem 87.6 2.9 0.0001 27.4 7.5 84 1-129 1-85 (120)
36 1srr_A SPO0F, sporulation resp 86.8 4.7 0.00016 26.6 8.2 40 71-129 46-85 (124)
37 3hzh_A Chemotaxis response reg 85.1 2.5 8.5E-05 29.6 6.3 38 72-128 83-120 (157)
38 1y81_A Conserved hypothetical 85.0 2.6 9E-05 29.4 6.2 20 160-179 106-125 (138)
39 3a10_A Response regulator; pho 84.7 5.8 0.0002 25.7 7.7 39 71-128 44-82 (116)
40 3cu5_A Two component transcrip 84.7 7.4 0.00025 26.5 11.9 40 71-129 48-87 (141)
41 2qxy_A Response regulator; reg 84.6 7.3 0.00025 26.3 9.7 38 71-128 47-84 (142)
42 3clw_A Conserved exported prot 84.5 12 0.00041 32.3 11.4 114 106-221 110-226 (507)
43 3hdg_A Uncharacterized protein 83.9 5 0.00017 27.0 7.3 41 71-130 50-90 (137)
44 3jte_A Response regulator rece 83.7 8 0.00027 26.1 8.7 40 71-129 48-87 (143)
45 3eqz_A Response regulator; str 83.7 7.6 0.00026 25.8 8.6 36 73-127 47-82 (135)
46 1mvo_A PHOP response regulator 83.4 7.6 0.00026 26.0 8.1 40 71-129 46-85 (136)
47 1dz3_A Stage 0 sporulation pro 82.2 6.6 0.00023 26.1 7.4 83 1-128 1-86 (130)
48 3cz5_A Two-component response 82.1 8.6 0.00029 26.4 8.1 40 71-129 50-89 (153)
49 3nhm_A Response regulator; pro 81.7 9.2 0.00032 25.4 9.5 82 2-129 4-87 (133)
50 3f6c_A Positive transcription 81.4 6 0.00021 26.4 6.9 41 71-130 45-85 (134)
51 3gl9_A Response regulator; bet 81.1 9.5 0.00032 25.1 8.2 83 1-129 1-86 (122)
52 3n53_A Response regulator rece 80.4 8.9 0.0003 25.8 7.6 81 3-129 4-86 (140)
53 3eul_A Possible nitrate/nitrit 80.0 11 0.00038 25.8 8.1 41 71-130 60-100 (152)
54 3ff4_A Uncharacterized protein 80.0 12 0.0004 25.5 10.1 104 4-175 6-110 (122)
55 2qr3_A Two-component system re 79.9 5.8 0.0002 26.7 6.5 43 71-127 46-88 (140)
56 2wnw_A Activated by transcript 79.8 27 0.00092 29.6 14.9 142 70-218 80-230 (447)
57 3kto_A Response regulator rece 78.6 7.5 0.00026 26.2 6.7 40 71-129 49-90 (136)
58 3eod_A Protein HNR; response r 78.6 12 0.0004 24.7 8.8 40 71-129 50-89 (130)
59 3lua_A Response regulator rece 78.2 10 0.00034 25.6 7.3 40 71-129 49-91 (140)
60 2qsj_A DNA-binding response re 78.1 11 0.00037 25.9 7.6 41 71-130 49-89 (154)
61 2rjn_A Response regulator rece 77.3 15 0.00051 25.2 9.2 40 71-129 50-89 (154)
62 4dad_A Putative pilus assembly 76.7 15 0.00051 24.9 8.1 40 71-129 66-105 (146)
63 3i42_A Response regulator rece 76.5 13 0.00046 24.3 8.3 40 71-129 46-87 (127)
64 3b2n_A Uncharacterized protein 76.5 12 0.0004 25.0 7.2 41 71-130 48-88 (133)
65 3f6p_A Transcriptional regulat 76.2 13 0.00046 24.2 8.9 13 1-13 1-13 (120)
66 3kht_A Response regulator; PSI 76.2 14 0.00048 24.9 7.6 41 71-130 50-92 (144)
67 1yio_A Response regulatory pro 74.4 22 0.00076 25.8 8.9 41 71-130 47-87 (208)
68 3cg4_A Response regulator rece 74.4 14 0.00048 24.8 7.2 40 71-129 50-91 (142)
69 1jlj_A Gephyrin; globular alph 73.3 7 0.00024 28.9 5.5 67 4-82 18-88 (189)
70 2gkg_A Response regulator homo 72.6 15 0.0005 23.9 6.8 36 71-125 48-86 (127)
71 3hv2_A Response regulator/HD d 72.6 20 0.00069 24.5 10.5 41 71-130 57-97 (153)
72 2jba_A Phosphate regulon trans 72.1 14 0.00048 24.1 6.6 40 71-129 45-86 (127)
73 3cnb_A DNA-binding response re 72.1 19 0.00065 24.0 8.2 40 71-129 53-94 (143)
74 1qkk_A DCTD, C4-dicarboxylate 72.1 21 0.00071 24.4 8.0 39 71-128 46-84 (155)
75 3hdv_A Response regulator; PSI 71.9 14 0.00047 24.6 6.6 40 71-129 51-91 (136)
76 3heb_A Response regulator rece 71.7 14 0.00049 25.2 6.8 40 71-129 58-99 (152)
77 1iuk_A Hypothetical protein TT 71.7 17 0.00058 25.2 7.0 16 160-175 107-122 (140)
78 1zgz_A Torcad operon transcrip 71.4 18 0.00061 23.4 8.5 39 71-129 45-83 (122)
79 2zay_A Response regulator rece 71.3 18 0.00062 24.4 7.2 40 71-129 51-92 (147)
80 1dbw_A Transcriptional regulat 70.8 19 0.00065 23.5 8.9 40 71-129 46-85 (126)
81 1kgs_A DRRD, DNA binding respo 70.8 26 0.0009 25.7 8.5 41 71-130 45-85 (225)
82 2rdm_A Response regulator rece 70.4 20 0.00068 23.5 8.8 40 72-130 50-90 (132)
83 2qv0_A Protein MRKE; structura 70.4 19 0.00066 24.1 7.2 39 71-128 54-92 (143)
84 3ilh_A Two component response 70.4 21 0.00073 23.9 8.6 40 71-129 59-102 (146)
85 3rqi_A Response regulator prot 70.3 22 0.00076 25.4 7.8 41 71-130 50-90 (184)
86 3m2p_A UDP-N-acetylglucosamine 70.2 37 0.0013 26.5 11.2 49 71-127 61-109 (311)
87 2jk1_A HUPR, hydrogenase trans 70.0 22 0.00074 23.8 8.4 41 71-130 43-83 (139)
88 2is8_A Molybdopterin biosynthe 68.6 9.6 0.00033 27.3 5.3 68 3-82 4-72 (164)
89 3pzs_A PM kinase, pyridoxamine 68.5 40 0.0014 26.4 9.4 25 99-123 88-112 (289)
90 3grc_A Sensor protein, kinase; 68.2 24 0.00081 23.5 7.7 39 71-128 49-89 (140)
91 3klo_A Transcriptional regulat 67.9 28 0.00095 25.7 8.1 43 70-131 52-95 (225)
92 3snk_A Response regulator CHEY 67.4 10 0.00036 25.3 5.1 41 70-129 57-97 (135)
93 1s8n_A Putative antiterminator 67.3 24 0.00081 25.6 7.5 13 1-13 12-24 (205)
94 3pzy_A MOG; ssgcid, seattle st 67.3 8.2 0.00028 27.8 4.6 65 4-82 11-76 (164)
95 3q9s_A DNA-binding response re 67.0 28 0.00095 26.4 8.0 40 71-130 80-119 (249)
96 3pqe_A L-LDH, L-lactate dehydr 66.5 11 0.00039 30.4 5.8 51 70-128 71-124 (326)
97 2e85_A Hydrogenase 3 maturatio 66.1 12 0.0004 26.8 5.2 41 1-45 4-48 (159)
98 3t6k_A Response regulator rece 65.8 27 0.00092 23.3 7.7 39 71-128 47-87 (136)
99 3ldh_A Lactate dehydrogenase; 65.1 14 0.00047 30.0 6.0 51 70-128 87-140 (330)
100 1a04_A Nitrate/nitrite respons 65.0 31 0.0011 25.1 7.8 41 71-130 50-90 (215)
101 3kbq_A Protein TA0487; structu 65.0 11 0.00038 27.4 5.0 68 1-82 4-72 (172)
102 3jsz_A LGT1, putative uncharac 64.5 11 0.00039 30.9 5.2 89 104-217 150-239 (525)
103 2g2c_A Putative molybdenum cof 64.3 12 0.0004 27.0 5.0 66 4-82 9-79 (167)
104 2gzm_A Glutamate racemase; enz 64.0 49 0.0017 25.7 9.8 69 33-127 5-73 (267)
105 3c3w_A Two component transcrip 63.6 13 0.00045 27.7 5.4 41 71-130 46-86 (225)
106 2pbq_A Molybdenum cofactor bio 63.4 12 0.00043 27.2 5.1 66 4-82 9-78 (178)
107 3nep_X Malate dehydrogenase; h 63.3 14 0.00046 29.8 5.7 51 70-128 67-120 (314)
108 1a2o_A CHEB methylesterase; ba 63.0 27 0.00093 28.4 7.6 83 1-129 1-86 (349)
109 2a9o_A Response regulator; ess 62.9 27 0.00092 22.3 6.7 12 1-13 1-12 (120)
110 3crn_A Response regulator rece 61.8 31 0.0011 22.7 8.2 40 71-129 46-85 (132)
111 3p7m_A Malate dehydrogenase; p 61.6 16 0.00054 29.5 5.8 51 70-128 71-124 (321)
112 3iwt_A 178AA long hypothetical 61.4 12 0.00041 27.1 4.7 68 4-82 19-91 (178)
113 3kyj_B CHEY6 protein, putative 60.9 28 0.00097 23.3 6.5 36 72-127 60-95 (145)
114 3hhp_A Malate dehydrogenase; M 60.8 17 0.00059 29.1 5.9 51 70-128 67-120 (312)
115 3gvi_A Malate dehydrogenase; N 60.3 17 0.00058 29.4 5.8 51 70-128 73-126 (324)
116 1oju_A MDH, malate dehydrogena 60.2 21 0.00073 28.3 6.3 51 70-128 67-120 (294)
117 1ys7_A Transcriptional regulat 59.7 49 0.0017 24.3 8.6 41 71-130 50-90 (233)
118 1y5e_A Molybdenum cofactor bio 59.7 28 0.00095 25.0 6.4 65 4-82 17-82 (169)
119 2pl1_A Transcriptional regulat 59.6 32 0.0011 22.0 8.1 40 71-129 43-82 (121)
120 3tl2_A Malate dehydrogenase; c 59.3 18 0.00063 29.0 5.8 51 70-128 76-129 (315)
121 3ist_A Glutamate racemase; str 59.0 62 0.0021 25.2 9.5 69 33-127 7-75 (269)
122 2d59_A Hypothetical protein PH 58.8 42 0.0014 23.2 9.0 16 160-175 114-129 (144)
123 2oqr_A Sensory transduction pr 57.6 43 0.0015 24.6 7.5 39 71-129 47-85 (230)
124 3rfq_A Pterin-4-alpha-carbinol 57.5 19 0.00065 26.5 5.1 65 4-82 34-99 (185)
125 1mld_A Malate dehydrogenase; o 57.5 27 0.00094 27.9 6.6 51 70-128 66-119 (314)
126 3t8y_A CHEB, chemotaxis respon 57.1 45 0.0015 23.0 7.6 38 71-128 70-107 (164)
127 3r0j_A Possible two component 56.6 56 0.0019 24.5 8.1 42 71-131 66-107 (250)
128 3cg0_A Response regulator rece 55.7 41 0.0014 22.2 7.8 39 71-129 53-92 (140)
129 3vku_A L-LDH, L-lactate dehydr 55.2 15 0.00051 29.7 4.6 51 70-128 74-127 (326)
130 1b8p_A Protein (malate dehydro 55.1 29 0.00098 27.9 6.3 50 70-128 81-135 (329)
131 2hqr_A Putative transcriptiona 55.1 56 0.0019 23.9 7.7 22 108-130 57-79 (223)
132 4aj2_A L-lactate dehydrogenase 54.7 29 0.00099 28.1 6.2 51 70-128 85-138 (331)
133 1uuy_A CNX1, molybdopterin bio 53.6 24 0.00083 25.2 5.2 67 4-82 9-81 (167)
134 2d4a_B Malate dehydrogenase; a 53.3 36 0.0012 27.1 6.6 51 70-128 65-118 (308)
135 1ez4_A Lactate dehydrogenase; 53.0 27 0.00091 28.0 5.8 54 70-128 70-123 (318)
136 1o6z_A MDH, malate dehydrogena 53.0 33 0.0011 27.2 6.3 50 70-128 68-121 (303)
137 2vyc_A Biodegradative arginine 52.7 1.1E+02 0.0036 27.9 10.3 42 71-127 52-93 (755)
138 2yxb_A Coenzyme B12-dependent 52.7 59 0.002 23.0 8.6 63 34-129 47-110 (161)
139 1k66_A Phytochrome response re 52.6 46 0.0016 22.1 6.4 40 71-129 61-102 (149)
140 1di6_A MOGA, molybdenum cofact 52.5 27 0.00091 25.9 5.3 67 4-82 7-76 (195)
141 2gwr_A DNA-binding response re 52.3 49 0.0017 24.6 7.0 40 71-130 48-87 (238)
142 3men_A Acetylpolyamine aminohy 51.7 21 0.00072 29.4 4.9 49 70-126 289-337 (362)
143 1y6j_A L-lactate dehydrogenase 50.9 30 0.001 27.7 5.8 50 70-128 72-125 (318)
144 2xxj_A L-LDH, L-lactate dehydr 50.8 35 0.0012 27.2 6.1 51 70-128 65-118 (310)
145 1k68_A Phytochrome response re 50.0 51 0.0017 21.5 7.7 41 71-130 54-96 (140)
146 3bul_A Methionine synthase; tr 49.8 1.1E+02 0.0037 26.9 9.4 65 34-131 127-191 (579)
147 1smk_A Malate dehydrogenase, g 49.5 40 0.0014 27.1 6.3 54 70-132 74-130 (326)
148 2i2x_B MTAC, methyltransferase 48.8 71 0.0024 24.6 7.5 64 34-130 152-215 (258)
149 3rht_A (gatase1)-like protein; 48.4 41 0.0014 26.2 6.0 12 1-13 4-15 (259)
150 2jfz_A Glutamate racemase; cel 47.8 91 0.0031 23.8 10.0 68 34-127 3-70 (255)
151 3fi9_A Malate dehydrogenase; s 47.7 23 0.00078 28.9 4.6 51 70-128 74-128 (343)
152 2duw_A Putative COA-binding pr 47.4 54 0.0019 22.7 6.1 16 160-175 107-122 (145)
153 3d0o_A L-LDH 1, L-lactate dehy 47.3 30 0.001 27.7 5.3 51 70-128 72-125 (317)
154 2zqz_A L-LDH, L-lactate dehydr 47.2 34 0.0011 27.6 5.5 51 70-128 74-127 (326)
155 3e59_A Pyoverdine biosynthesis 46.8 25 0.00084 28.5 4.5 64 101-177 88-152 (330)
156 2jfn_A Glutamate racemase; cel 46.2 1E+02 0.0036 24.0 9.7 70 33-127 23-92 (285)
157 1zuw_A Glutamate racemase 1; ( 45.9 1E+02 0.0035 23.9 9.8 69 33-127 5-74 (272)
158 3eq2_A Probable two-component 45.1 80 0.0027 25.7 7.7 40 71-129 48-87 (394)
159 3ik2_A Endoglucanase A; TIM-li 44.9 16 0.00054 31.5 3.3 83 95-179 194-276 (517)
160 2j48_A Two-component sensor ki 44.8 55 0.0019 20.4 8.5 40 71-129 44-85 (119)
161 3gt7_A Sensor protein; structu 44.8 70 0.0024 21.6 9.1 40 71-129 50-91 (154)
162 3ew7_A LMO0794 protein; Q8Y8U8 44.6 86 0.0029 22.6 8.2 45 71-128 60-104 (221)
163 3h1g_A Chemotaxis protein CHEY 44.5 63 0.0021 21.0 7.8 22 108-129 68-91 (129)
164 2x0j_A Malate dehydrogenase; o 44.4 44 0.0015 26.5 5.7 51 70-128 67-120 (294)
165 1ny5_A Transcriptional regulat 44.1 92 0.0032 25.5 7.9 41 71-130 43-83 (387)
166 1mkz_A Molybdenum cofactor bio 43.8 38 0.0013 24.4 4.9 65 4-82 14-79 (172)
167 2b4a_A BH3024; flavodoxin-like 43.6 67 0.0023 21.1 7.9 39 71-128 59-98 (138)
168 1ccw_A Protein (glutamate muta 43.4 76 0.0026 21.7 6.8 62 34-128 32-94 (137)
169 2qvg_A Two component response 42.8 70 0.0024 21.1 6.1 40 71-129 58-99 (143)
170 2nt0_A Glucosylceramidase; cer 42.6 1.6E+02 0.0055 25.2 15.3 146 70-218 113-273 (497)
171 3v7e_A Ribosome-associated pro 42.2 42 0.0014 20.8 4.3 46 105-177 15-60 (82)
172 2pjk_A 178AA long hypothetical 41.6 61 0.0021 23.4 5.7 67 4-81 19-90 (178)
173 5mdh_A Malate dehydrogenase; o 41.4 81 0.0028 25.4 6.9 54 70-128 77-131 (333)
174 1dc7_A NTRC, nitrogen regulati 40.9 68 0.0023 20.3 6.9 22 109-130 65-86 (124)
175 1zh2_A KDP operon transcriptio 40.6 68 0.0023 20.3 6.9 39 71-129 44-82 (121)
176 1ldn_A L-lactate dehydrogenase 40.4 75 0.0025 25.3 6.6 54 70-128 72-125 (316)
177 3q9b_A Acetylpolyamine amidohy 40.2 23 0.00078 28.9 3.4 41 70-116 271-311 (341)
178 3n0r_A Response regulator; sig 40.2 1.1E+02 0.0037 23.8 7.4 81 3-128 161-242 (286)
179 3lte_A Response regulator; str 39.8 75 0.0026 20.5 8.3 38 71-127 49-88 (132)
180 3h5i_A Response regulator/sens 39.0 82 0.0028 20.8 8.2 40 71-130 49-89 (140)
181 4a69_A Histone deacetylase 3,; 38.7 26 0.00088 29.0 3.6 50 70-127 246-295 (376)
182 1guz_A Malate dehydrogenase; o 38.7 75 0.0026 25.1 6.3 52 70-129 67-121 (310)
183 1xhf_A DYE resistance, aerobic 38.3 76 0.0026 20.2 8.4 38 71-128 46-83 (123)
184 4dkx_A RAS-related protein RAB 38.1 1.2E+02 0.0041 22.4 9.0 17 160-176 139-155 (216)
185 3ug3_A Alpha-L-arabinofuranosi 38.0 81 0.0028 27.2 6.7 54 70-127 179-232 (504)
186 3ew8_A HD8, histone deacetylas 37.8 34 0.0012 28.4 4.1 49 70-126 254-302 (388)
187 3max_A HD2, histone deacetylas 37.8 26 0.0009 28.8 3.5 50 70-127 245-294 (367)
188 2ayx_A Sensor kinase protein R 37.7 1.3E+02 0.0044 22.7 8.5 42 71-131 172-213 (254)
189 2jfq_A Glutamate racemase; cel 37.4 1.5E+02 0.005 23.2 9.6 69 33-127 24-92 (286)
190 3ezx_A MMCP 1, monomethylamine 37.4 1.3E+02 0.0043 22.5 9.0 62 34-128 121-186 (215)
191 3luf_A Two-component system re 37.4 63 0.0021 24.6 5.6 12 2-13 4-15 (259)
192 2p10_A MLL9387 protein; putati 37.2 1.1E+02 0.0038 24.1 6.8 54 70-126 181-234 (286)
193 1y80_A Predicted cobalamin bin 37.0 1.2E+02 0.0042 22.2 7.6 41 71-128 138-180 (210)
194 3dzd_A Transcriptional regulat 37.0 1.1E+02 0.0037 24.9 7.2 42 71-131 43-84 (368)
195 2pln_A HP1043, response regula 36.8 87 0.003 20.4 7.3 21 108-129 75-96 (137)
196 2y2w_A Arabinofuranosidase; hy 35.8 1E+02 0.0034 27.1 7.0 54 71-128 203-256 (574)
197 3jug_A Beta-mannanase; TIM-bar 35.7 95 0.0032 25.1 6.5 48 71-127 135-182 (345)
198 3uhf_A Glutamate racemase; str 35.3 1.6E+02 0.0054 23.0 8.0 69 33-127 26-94 (274)
199 3pu6_A Uncharacterized protein 35.2 62 0.0021 22.9 4.8 40 1-44 3-45 (157)
200 1ur5_A Malate dehydrogenase; o 35.2 52 0.0018 26.1 4.8 51 70-128 68-121 (309)
201 4hty_A Cellulase; (alpha/beta) 34.8 1.3E+02 0.0043 24.3 7.2 66 49-127 164-229 (359)
202 3abz_A Beta-glucosidase I; gly 34.1 35 0.0012 31.5 4.1 58 70-131 571-628 (845)
203 2csu_A 457AA long hypothetical 34.0 2.1E+02 0.0072 24.1 9.0 63 71-174 63-125 (457)
204 7mdh_A Protein (malate dehydro 33.8 80 0.0027 26.0 5.8 51 70-128 106-160 (375)
205 1t2d_A LDH-P, L-lactate dehydr 33.5 1.1E+02 0.0036 24.5 6.4 55 70-128 70-128 (322)
206 3on1_A BH2414 protein; structu 33.5 65 0.0022 20.7 4.3 46 105-177 22-67 (101)
207 1a5z_A L-lactate dehydrogenase 33.4 84 0.0029 25.0 5.8 51 70-128 65-118 (319)
208 1hjs_A Beta-1,4-galactanase; 4 33.3 1.9E+02 0.0063 23.2 9.0 117 98-216 149-287 (332)
209 3v7q_A Probable ribosomal prot 33.0 77 0.0026 20.4 4.6 46 105-177 23-68 (101)
210 3j21_Z 50S ribosomal protein L 32.6 83 0.0028 20.1 4.7 45 105-176 19-63 (99)
211 3dhn_A NAD-dependent epimerase 32.6 63 0.0022 23.6 4.8 48 71-128 66-113 (227)
212 2i6t_A Ubiquitin-conjugating e 32.6 70 0.0024 25.4 5.2 50 70-128 75-127 (303)
213 2jlj_A YSCU, YOP proteins tran 32.5 24 0.00081 24.8 2.1 103 101-212 23-131 (144)
214 2hjr_A Malate dehydrogenase; m 32.1 1.2E+02 0.0042 24.2 6.6 51 70-128 80-133 (328)
215 2dwu_A Glutamate racemase; iso 32.1 1.8E+02 0.006 22.5 8.9 69 33-127 9-77 (276)
216 3c97_A Signal transduction his 32.0 1.1E+02 0.0037 20.1 7.4 13 1-13 9-21 (140)
217 1pzg_A LDH, lactate dehydrogen 31.8 1.1E+02 0.0039 24.4 6.4 56 70-128 76-134 (331)
218 4ezb_A Uncharacterized conserv 31.3 1.6E+02 0.0056 23.2 7.3 13 71-83 86-98 (317)
219 3u95_A Glycoside hydrolase, fa 31.2 1.3E+02 0.0046 25.5 7.0 26 103-128 136-161 (477)
220 1zz1_A Histone deacetylase-lik 31.1 1.2E+02 0.0041 24.9 6.5 53 70-125 255-307 (369)
221 3nco_A Endoglucanase fncel5A; 30.9 1.6E+02 0.0055 23.0 7.2 47 71-126 132-178 (320)
222 1w41_A 50S ribosomal protein L 30.7 84 0.0029 20.2 4.5 45 105-176 20-64 (101)
223 4ekj_A Beta-xylosidase; TIM-ba 30.6 1.3E+02 0.0045 25.3 7.0 25 196-220 172-196 (500)
224 1cfz_A Hydrogenase 2 maturatio 29.9 1.5E+02 0.005 20.9 12.3 62 101-172 92-155 (162)
225 2c7f_A Alpha-L-arabinofuranosi 29.6 1.3E+02 0.0044 25.8 6.7 53 72-128 172-224 (513)
226 3c3m_A Response regulator rece 29.3 1.2E+02 0.0041 19.8 8.4 40 71-129 46-87 (138)
227 2v6b_A L-LDH, L-lactate dehydr 29.3 96 0.0033 24.4 5.5 54 70-128 65-118 (304)
228 3u5e_c L32, RP73, YL38, 60S ri 29.0 84 0.0029 20.4 4.3 44 105-175 26-69 (105)
229 3fxt_A Nucleoside diphosphate- 28.6 75 0.0026 21.2 3.9 49 70-128 29-77 (113)
230 3cpq_A 50S ribosomal protein L 28.1 1.2E+02 0.004 19.8 5.0 44 106-176 26-69 (110)
231 1p2f_A Response regulator; DRR 27.8 1.7E+02 0.0058 21.0 8.2 41 71-130 42-82 (220)
232 1c9k_A COBU, adenosylcobinamid 27.7 1.6E+02 0.0055 21.3 6.0 53 100-168 109-167 (180)
233 3iz5_f 60S ribosomal protein L 27.4 1E+02 0.0036 20.3 4.6 45 105-176 30-74 (112)
234 3u31_A SIR2A, transcriptional 27.4 46 0.0016 26.4 3.2 65 1-84 191-255 (290)
235 3st7_A Capsular polysaccharide 27.3 2.3E+02 0.008 22.4 7.8 50 72-128 46-95 (369)
236 1p6q_A CHEY2; chemotaxis, sign 27.2 1.2E+02 0.0043 19.3 7.5 40 71-129 50-91 (129)
237 2qzj_A Two-component response 26.9 1.3E+02 0.0046 19.6 7.4 39 71-129 47-85 (136)
238 3h2s_A Putative NADH-flavin re 26.6 1.8E+02 0.0062 20.9 7.4 45 71-127 61-105 (224)
239 1y7t_A Malate dehydrogenase; N 26.2 1.6E+02 0.0054 23.3 6.3 50 71-128 79-132 (327)
240 3to5_A CHEY homolog; alpha(5)b 26.1 1.5E+02 0.0053 20.0 7.7 82 4-130 14-98 (134)
241 1qw9_A Arabinosidase, alpha-L- 25.7 1.7E+02 0.0058 25.0 6.7 52 73-128 165-216 (502)
242 1obb_A Maltase, alpha-glucosid 25.5 1.8E+02 0.0061 24.8 6.7 30 99-128 125-154 (480)
243 3m6m_D Sensory/regulatory prot 25.4 1.5E+02 0.0051 19.6 8.9 14 71-84 57-70 (143)
244 4a18_G RPL30; ribosome, eukary 25.3 1.1E+02 0.0039 19.7 4.4 44 105-175 26-69 (104)
245 2jli_A YSCU, YOP proteins tran 25.3 33 0.0011 23.3 1.8 84 117-209 35-119 (123)
246 3dx5_A Uncharacterized protein 25.0 2.2E+02 0.0077 21.5 7.7 28 98-127 78-105 (286)
247 1jbe_A Chemotaxis protein CHEY 24.5 1.4E+02 0.0048 18.9 8.0 40 71-129 48-89 (128)
248 2ewd_A Lactate dehydrogenase,; 24.1 1.8E+02 0.0063 22.8 6.3 51 70-128 70-123 (317)
249 2bib_A CBPE, teichoic acid pho 23.6 97 0.0033 26.7 4.9 60 4-84 197-257 (547)
250 3q3j_B RHO-related GTP-binding 23.0 1.7E+02 0.0057 21.2 5.6 43 71-127 97-139 (214)
251 1lg4_A Doppel protein, prion-l 23.0 39 0.0013 22.3 1.6 26 174-199 45-70 (129)
252 3ngf_A AP endonuclease, family 22.8 2.5E+02 0.0084 21.1 10.1 26 99-126 88-113 (269)
253 3n9k_A Glucan 1,3-beta-glucosi 22.4 3.3E+02 0.011 22.4 7.7 45 73-125 181-225 (399)
254 2l82_A Designed protein OR32; 22.0 1.8E+02 0.006 19.2 4.7 90 98-216 60-152 (162)
255 1i17_A Mouse doppel, prion-lik 21.7 32 0.0011 21.9 1.0 12 188-199 33-44 (107)
256 1wky_A Endo-beta-1,4-mannanase 21.7 3.2E+02 0.011 22.9 7.7 47 71-126 120-166 (464)
257 3aof_A Endoglucanase; glycosyl 21.7 2.5E+02 0.0086 21.7 6.7 46 71-125 124-169 (317)
258 1lld_A L-lactate dehydrogenase 21.7 1.8E+02 0.0061 22.7 5.8 51 70-128 73-126 (319)
259 4h7p_A Malate dehydrogenase; s 21.7 2.2E+02 0.0076 23.0 6.3 51 70-128 98-152 (345)
260 4ao9_A Beta-phenylalanine amin 21.6 1.4E+02 0.005 25.1 5.4 20 156-175 240-260 (454)
261 1b73_A Glutamate racemase; iso 21.6 2.7E+02 0.0091 21.1 9.3 68 34-127 3-70 (254)
262 1ma3_A SIR2-AF2, transcription 21.3 61 0.0021 25.0 2.8 65 1-84 158-222 (253)
263 1mb3_A Cell division response 21.2 1.6E+02 0.0055 18.4 7.5 39 71-128 44-84 (124)
264 2qlc_A DNA repair protein RADC 20.9 2E+02 0.0069 19.4 6.0 23 154-176 87-109 (126)
265 2vvt_A Glutamate racemase; iso 20.6 3E+02 0.01 21.4 10.2 69 33-127 26-94 (290)
266 1u8x_X Maltose-6'-phosphate gl 20.6 89 0.0031 26.6 3.9 26 103-128 148-173 (472)
267 2hjh_A NAD-dependent histone d 20.2 61 0.0021 26.5 2.7 41 1-47 230-270 (354)
268 2r25_B Osmosensing histidine p 20.0 1.9E+02 0.0064 18.7 7.4 39 71-128 51-90 (133)
269 1fob_A Beta-1,4-galactanase; B 20.0 3.3E+02 0.011 21.6 10.0 117 98-216 150-288 (334)
No 1
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-34 Score=226.07 Aligned_cols=220 Identities=32% Similarity=0.504 Sum_probs=178.3
Q ss_pred CeEEEEcccccccccCC-----C----ChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCc
Q 026021 3 PKIYLFGDSITESSFTY-----G----GWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVST 73 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~-----~----~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p 73 (244)
+||+++|||+|+.|++. . +|...|++.+...+.++|.|++|.++.+...++++.+.. ..+|
T Consensus 4 ~~i~~~GDSit~~g~~~~~~~~~g~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~~~~~~~~----------~~~p 73 (240)
T 3mil_A 4 EKFLLFGDSITEFAFNTRPIEDGKDQYALGAALVNEYTRKMDILQRGFKGYTSRWALKILPEILKH----------ESNI 73 (240)
T ss_dssp EEEEEEESHHHHTTTCSCCSTTCCCCCCHHHHHHHHTTTTEEEEEEECTTCCHHHHHHHHHHHHHH----------CCCE
T ss_pred ccEEEEccchhhhhcCcccccccchHhHHHHHHHHHhccceEEEecCcCcccHHHHHHHHHHHhcc----------cCCC
Confidence 59999999999547653 2 399999999987799999999999999999888887763 2689
Q ss_pred cEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchH
Q 026021 74 IAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNE 153 (244)
Q Consensus 74 d~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
|+|+|++|+||..... ....+.++|.++++++++.+++. +++|++++++++.......... ........+.+.
T Consensus 74 d~vvi~~G~ND~~~~~----~~~~~~~~~~~~l~~~i~~~~~~--~~~vil~~~~p~~~~~~~~~~~-~~~~~~~~~~~~ 146 (240)
T 3mil_A 74 VMATIFLGANDACSAG----PQSVPLPEFIDNIRQMVSLMKSY--HIRPIIIGPGLVDREKWEKEKS-EEIALGYFRTNE 146 (240)
T ss_dssp EEEEEECCTTTTSSSS----TTCCCHHHHHHHHHHHHHHHHHT--TCEEEEECCCCCCHHHHHHHCH-HHHHTTCCCCHH
T ss_pred CEEEEEeecCcCCccC----CCCCCHHHHHHHHHHHHHHHHHc--CCeEEEEcCCCCCchhhhhhcc-ccccccccchHH
Confidence 9999999999996421 24668999999999999999998 4689999999987664322100 000011235678
Q ss_pred HHHHHHHHHHHHHHhcCCCeeechhHhhhhhh-cccccccccccCChhHHHHHHHHHHHHHhhcC--CCCCCCCCCCCCC
Q 026021 154 AAGAYAKACIEVAGECGLPVVDLWTKMQQLAD-WKTAYLSDGLHLNETGNRVVFEEVVMKLKTEG--LSLENLPVDLPMI 230 (244)
Q Consensus 154 ~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~-~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~~--~~~~~~~~~~p~~ 230 (244)
.+..||+.++++|++.++.|+|++..+....+ ....+..||+|||++||++||+.+++.|++.+ ..+..+|..+|.|
T Consensus 147 ~~~~~n~~~~~~a~~~~v~~vD~~~~~~~~~~~~~~~~~~Dg~Hpn~~G~~~~a~~l~~~l~~~~p~~~~~~~p~~~p~~ 226 (240)
T 3mil_A 147 NFAIYSDALAKLANEEKVPFVALNKAFQQEGGDAWQQLLTDGLHFSGKGYKIFHDELLKVIETFYPQYHPKNMQYKLKDW 226 (240)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECHHHHHHHHHGGGGGGGBSSSSSBCHHHHHHHHHHHHHHHHHHCGGGSGGGSCCCSCCG
T ss_pred HHHHHHHHHHHHHHHhCCeEEehHHHHhhcCCccHhhccCCCCCcCHHHHHHHHHHHHHHHHHhccccChhhCCCCCCCh
Confidence 89999999999999999999999999876543 23468899999999999999999999999984 3445799999999
Q ss_pred CCCCCCCCC
Q 026021 231 SEIDPNDPL 239 (244)
Q Consensus 231 ~~~~~~~~~ 239 (244)
.+++|..+.
T Consensus 227 ~~~~~~~~~ 235 (240)
T 3mil_A 227 RDVLDDGSN 235 (240)
T ss_dssp GGCCTTCTT
T ss_pred hhcCCCCcc
Confidence 999988764
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.7e-33 Score=217.97 Aligned_cols=180 Identities=17% Similarity=0.207 Sum_probs=147.1
Q ss_pred CeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 3 PKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
++|+|+||||| .||...+...+.. ..++|+|++|.++.+++.++++.+. ..+||+|+|++|+
T Consensus 27 ~~Iv~~GDSit------~gw~~~~~~~~~~-~~viN~Gi~G~tt~~~l~r~~~~v~-----------~~~Pd~vvi~~G~ 88 (209)
T 4hf7_A 27 KRVVFMGNXIT------EGWVRTHPDFFKT-NGYIGRGISGQTSYQFLLRFREDVI-----------NLSPALVVINAGT 88 (209)
T ss_dssp CCEEEEESHHH------HHHHHHCHHHHHH-HTEEEEECTTCCHHHHHHHHHHHTG-----------GGCCSEEEECCCH
T ss_pred CeEEEECcHHH------hChhHHHHHhcCC-CCEEEeccCcccHHHHHHHHHHHHH-----------hcCCCEEEEEeCC
Confidence 47999999999 3577777776654 4799999999999999999988766 3789999999999
Q ss_pred CCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHH
Q 026021 83 NDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKAC 162 (244)
Q Consensus 83 ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (244)
||+... ....+.+.+..+++.+++.+++ |+++|++++++|........ .....++.+..||+.+
T Consensus 89 ND~~~~-----~~~~~~~~~~~~l~~ii~~~~~--~~~~iil~~~~P~~~~~~~~---------~~~~~~~~i~~~n~~i 152 (209)
T 4hf7_A 89 NDVAEN-----TGAYNEDYTFGNIASMAELAKA--NKIKVILTSVLPAAEFPWRR---------EIKDAPQKIQSLNARI 152 (209)
T ss_dssp HHHTTS-----SSSCCHHHHHHHHHHHHHHHHH--TTCEEEEECCCCCSCCTTCT---------TCCCHHHHHHHHHHHH
T ss_pred CcCccc-----cccccHHHHHHHHHHhhHHHhc--cCceEEEEeeeccCcccccc---------cccchhHHHHHHHHHH
Confidence 998532 2345678999999999999987 57899999998876543322 1224567889999999
Q ss_pred HHHHHhcCCCeeechhHhhhhhh--cccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 163 IEVAGECGLPVVDLWTKMQQLAD--WKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 163 ~~~a~~~~v~~iD~~~~~~~~~~--~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
+++|+++++.|||++..+....+ ....++.||+|||++||++||+.+.+.|++.
T Consensus 153 ~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~~~DglHpn~~Gy~~~a~~i~~~l~k~ 208 (209)
T 4hf7_A 153 EAYAKANKIPFVNYYQPMVVGENKALNPQYTKDGVHPTGEGYDIMEALIKQAIEKA 208 (209)
T ss_dssp HHHHHHTTCCEECSHHHHEETTTTEECGGGBSSSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEeecHHHHhcccccccCcccCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998754332 3456789999999999999999999999863
No 3
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.8e-32 Score=211.44 Aligned_cols=177 Identities=16% Similarity=0.211 Sum_probs=147.8
Q ss_pred CCeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcch-HHHHHHHHhhccccCCCcccccccCCccEEEEEe
Q 026021 2 RPKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNT-RWAVKVMERVLPAANGESESERERVSTIAVAVFF 80 (244)
Q Consensus 2 ~~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~ 80 (244)
+|||+++||||| .||...+++.+..+..+.+.+.+|.++ ......+++... ..+||+|+|++
T Consensus 20 ~prVl~iGDSit------~G~~~~l~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----------~~~pd~Vvi~~ 82 (200)
T 4h08_A 20 LPHVLLIGNSIT------RGYYGKVEAALKEKAYVGRLSNSKSVGDPALIEELAVVLK-----------NTKFDVIHFNN 82 (200)
T ss_dssp SCEEEEEESHHH------HHHHHHHHHHTTTTCEEEEEEESCCTTCHHHHHHHHHHHH-----------HSCCSEEEECC
T ss_pred CCeEEEEchhHH------hhhHHHHHHHhccCCeEEEEeccCCccHHHHHHHHHHHHh-----------cCCCCeEEEEe
Confidence 379999999999 458899999998777889988876544 455566777666 48999999999
Q ss_pred ccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHH
Q 026021 81 GANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAK 160 (244)
Q Consensus 81 G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (244)
|+||.. .++++|.++++++++.+++.+|+++|++++++|+....... .....+..+..||+
T Consensus 83 G~ND~~----------~~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~P~~~~~~~~---------~~~~~~~~~~~~n~ 143 (200)
T 4h08_A 83 GLHGFD----------YTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMK---------EFAPITERLNVRNQ 143 (200)
T ss_dssp CSSCTT----------SCHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCEESGGGC---------EECTHHHHHHHHHH
T ss_pred eeCCCC----------CCHHHHHHHHHHHHHHHhhhCCCccEEEeccCCCccccccc---------ccchhHHHHHHHHH
Confidence 999973 36899999999999999999999999999998875432221 13356788999999
Q ss_pred HHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 161 ACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 161 ~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
.++++|++++++|+|++..+..... ..+..||+|||++||++||+.+++.|+++
T Consensus 144 ~~~~~a~~~~v~~iD~~~~~~~~~~--~~~~~Dg~Hpn~~Gy~~~A~~i~~~i~~~ 197 (200)
T 4h08_A 144 IALKHINRASIEVNDLWKVVIDHPE--YYAGGDGTHPIDAGYSALANQVIKVIKNV 197 (200)
T ss_dssp HHHHHHHHTTCEEECHHHHHTTCGG--GTTTSCSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhcceEEEecHHhHhcCHH--HhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865433 35678999999999999999999999875
No 4
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=100.00 E-value=5.8e-32 Score=208.00 Aligned_cols=181 Identities=30% Similarity=0.460 Sum_probs=151.7
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHh----hcc----ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCC
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHH----FSR----TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVS 72 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~----~~~----~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 72 (244)
|+ +|+++|||+| .|++..+|...+.+. ++. .+.++|.|++|.++.....++++.+. ..+
T Consensus 1 m~-~i~~~GDS~t-~g~~~~~~~~~l~~~l~~~~~~~~~~~~~v~n~g~~G~~~~~~~~~~~~~~~-----------~~~ 67 (195)
T 1yzf_A 1 MR-KIVLFGDSIT-AGYLDEAVSPVLVDLVKRDIAAMGLEEVAVINAGMPGDTTEDGLKRLNKEVL-----------IEK 67 (195)
T ss_dssp CE-EEEEEESHHH-HCBTTBSSCSHHHHHHHHHHHHTTBCCEEEEEEECTTCCHHHHHHHHHHHTG-----------GGC
T ss_pred CC-eEEEEccccc-cCcCCCChHHHHHHHHHHhccccCCceEEEEeCCCCCCCHHHHHHHHHHhhh-----------hcC
Confidence 65 9999999999 777666776555544 432 48899999999999998888887765 378
Q ss_pred ccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccch
Q 026021 73 TIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTN 152 (244)
Q Consensus 73 pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
||+|+|++|+||... ....+.++|.++++++++.++ +++|++++++|+.... .....+
T Consensus 68 pd~vvi~~G~ND~~~------~~~~~~~~~~~~l~~~i~~~~----~~~vi~~~~~p~~~~~------------~~~~~~ 125 (195)
T 1yzf_A 68 PDEVVIFFGANDASL------DRNITVATFRENLETMIHEIG----SEKVILITPPYADSGR------------RPERPQ 125 (195)
T ss_dssp CSEEEEECCTTTTCT------TSCCCHHHHHHHHHHHHHHHC----GGGEEEECCCCCCTTT------------CTTSCH
T ss_pred CCEEEEEeeccccCc------cCCCCHHHHHHHHHHHHHHhc----CCEEEEEcCCCCcccc------------chhhhH
Confidence 999999999999962 135678999999999999998 5779999999876431 112567
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 153 EAAGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 153 ~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
..+..||+.++++|+++++.|+|++..+.....+...+..||+|||++||+++|+.+++.|++.
T Consensus 126 ~~~~~~n~~~~~~a~~~~~~~iD~~~~~~~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~l~~~ 189 (195)
T 1yzf_A 126 TRIKELVKVAQEVGAAHNLPVIDLYKAMTVYPGTDEFLQADGLHFSQVGYELLGALIVREIKGR 189 (195)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEECHHHHHHHSTTGGGGBCTTSSSBCHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHhCCeEEehHHHHhhcCCccccccCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999887767677899999999999999999999999875
No 5
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=99.98 E-value=6.4e-32 Score=214.21 Aligned_cols=181 Identities=18% Similarity=0.218 Sum_probs=149.2
Q ss_pred CeEEEEcccccccccCC---------CChHHHHHHhhccccceEeeccCCcchH----------HHHHHHHhhccccCCC
Q 026021 3 PKIYLFGDSITESSFTY---------GGWGASLAHHFSRTVDVVLRGYSGYNTR----------WAVKVMERVLPAANGE 63 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~---------~~~~~~l~~~~~~~~~v~n~g~~G~~~~----------~~~~~l~~~~~~~~~~ 63 (244)
++|+++|||+| .|++. .+|+..|++.++..+.++|.|++|.++. ....++++.+..
T Consensus 24 ~~I~~lGDSit-~G~~~~~~~~~~~~~~w~~~l~~~l~~~~~v~N~g~~G~t~~~~~~~~~~~~~~~~~l~~~l~~---- 98 (232)
T 3dci_A 24 KTVLAFGDSLT-WGADPATGLRHPVEHRWPDVLEAELAGKAKVHPEGLGGRTTCYDDHAGPACRNGARALEVALSC---- 98 (232)
T ss_dssp EEEEEEESHHH-HTBCTTTCCBCCGGGSHHHHHHHHHTTSEEEEEEECTTCBSSCCCCSSSSCCBHHHHHHHHHHH----
T ss_pred CEEEEEECccc-cCCCCCCcccCCcCCccHHHHHHHhCCCCeEEEcccCCccccccCcccccchhHHHHHHHHHhh----
Confidence 39999999999 66653 4899999999987799999999999986 677788777663
Q ss_pred cccccccCCc-cEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC-----CCceEEEEcCCCCChhhhhc
Q 026021 64 SESERERVST-IAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW-----PNTLVLLITPPPIDEEARLK 137 (244)
Q Consensus 64 ~~~~~~~~~p-d~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~-----p~~~vil~~~~~~~~~~~~~ 137 (244)
.+| |+|+|++|+||+... ...+.++|.++++++|+.+++.+ |+++|+|+++|++.......
T Consensus 99 -------~~p~d~VvI~~GtND~~~~------~~~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~~~~~~~~ 165 (232)
T 3dci_A 99 -------HMPLDLVIIMLGTNDIKPV------HGGRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCVAGPGGE 165 (232)
T ss_dssp -------HCSCSEEEEECCTTTTSGG------GTSSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCCCCCTTSS
T ss_pred -------CCCCCEEEEEeccCCCccc------cCCCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCcCcccCcc
Confidence 577 999999999999642 12479999999999999999987 89999999998875432101
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 138 HPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
+ . ..........|++.++++|++.++.|+|++..+ ..+..||+|||++||++||+.|++.|++.
T Consensus 166 ~--~------~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~-------~~~~~DgvHpn~~G~~~~A~~l~~~l~~~ 229 (232)
T 3dci_A 166 P--A------GGRDIEQSMRLAPLYRKLAAELGHHFFDAGSVA-------SASPVDGVHLDASATAAIGRALAAPVRDI 229 (232)
T ss_dssp C--G------GGCCHHHHTTHHHHHHHHHHHHTCEEEEGGGTC-------CCCTTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred c--c------cccHHHHHHHHHHHHHHHHHHhCCeEEcchHhc-------CcccCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 0 0 013456788999999999999999999987543 24789999999999999999999999874
No 6
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=99.98 E-value=1.5e-31 Score=209.36 Aligned_cols=184 Identities=20% Similarity=0.273 Sum_probs=147.8
Q ss_pred CCCeEEEEcccccccccC-------------CCChHHHHHHhhccccceEeeccCCcchH---------HHHHHHHhhcc
Q 026021 1 MRPKIYLFGDSITESSFT-------------YGGWGASLAHHFSRTVDVVLRGYSGYNTR---------WAVKVMERVLP 58 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~-------------~~~~~~~l~~~~~~~~~v~n~g~~G~~~~---------~~~~~l~~~~~ 58 (244)
|.++|+++|||+| .|++ ..+|+..|++.++..+.++|.|++|.++. ....++++.+.
T Consensus 1 ~~~~i~~~GDSit-~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~n~g~~G~t~~~~~~~~~~~~~~~~l~~~l~ 79 (216)
T 2q0q_A 1 MAKRILCFGDSLT-WGWVPVEDGAPTERFAPDVRWTGVLAQQLGADFEVIEEGLSARTTNIDDPTDPRLNGASYLPSCLA 79 (216)
T ss_dssp -CEEEEEEESHHH-HTBCCCTTCCCBCBCCTTTSHHHHHHHHHCTTEEEEEEECTTCBSSCCBTTBTTCBHHHHHHHHHH
T ss_pred CCceEEEEecCcc-cCcCCCCCccccccCCcccchHHHHHHHhCCCCeEEecCcCcccccccCCccccccHHHHHHHHHH
Confidence 5669999999999 6664 24699999999977789999999999988 45667776665
Q ss_pred ccCCCcccccccCCc-cEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC-------CCceEEEEcCCCC
Q 026021 59 AANGESESERERVST-IAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW-------PNTLVLLITPPPI 130 (244)
Q Consensus 59 ~~~~~~~~~~~~~~p-d~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~-------p~~~vil~~~~~~ 130 (244)
. .+| |+|+|++|+||.... ...+.++|.++++++++.+++++ |+++|+++++|++
T Consensus 80 ~-----------~~p~d~vvi~~G~ND~~~~------~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~~ 142 (216)
T 2q0q_A 80 T-----------HLPLDLVIIMLGTNDTKAY------FRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPPL 142 (216)
T ss_dssp H-----------HCSCSEEEEECCTGGGSGG------GCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCCC
T ss_pred h-----------CCCCCEEEEEecCcccchh------cCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCCc
Confidence 2 466 999999999999531 24578999999999999999998 8999999999887
Q ss_pred ChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHH
Q 026021 131 DEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVV 210 (244)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~ 210 (244)
.......+ . ......+.....||+.++++|+++++.|+|++..+. .+..||+|||++||++||+.++
T Consensus 143 ~~~~~~~~--~----~~~~~~~~~~~~~n~~~~~~a~~~~v~~iD~~~~~~-------~~~~Dg~Hpn~~G~~~~a~~i~ 209 (216)
T 2q0q_A 143 APMPHPWF--Q----LIFEGGEQKTTELARVYSALASFMKVPFFDAGSVIS-------TDGVDGIHFTEANNRDLGVALA 209 (216)
T ss_dssp CCCCSHHH--H----HHTTTHHHHHTTHHHHHHHHHHHHTCCEEEGGGTCC-------CCSTTSSSCCHHHHHHHHHHHH
T ss_pred CcccCCcc--h----hhhccHHHHHHHHHHHHHHHHHHcCCcEEchhHhcc-------cCCCCccCcCHHHHHHHHHHHH
Confidence 64200000 0 000134567789999999999999999999987663 3679999999999999999999
Q ss_pred HHHhh
Q 026021 211 MKLKT 215 (244)
Q Consensus 211 ~~l~~ 215 (244)
+.|++
T Consensus 210 ~~l~~ 214 (216)
T 2q0q_A 210 EQVRS 214 (216)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 7
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=99.97 E-value=8.3e-31 Score=200.38 Aligned_cols=173 Identities=17% Similarity=0.315 Sum_probs=142.2
Q ss_pred CCCeEEEEcccccccccC---CCChHHHHHHhhcc---ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCcc
Q 026021 1 MRPKIYLFGDSITESSFT---YGGWGASLAHHFSR---TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTI 74 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~---~~~~~~~l~~~~~~---~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd 74 (244)
|+++|+++|||+| .|++ ..+|+..+++.+.. .+.++|.|++|.++.....++++.+. ..+||
T Consensus 1 ~~~~i~~~GDSit-~G~g~~~~~~~~~~l~~~l~~~~~~~~v~n~g~~G~~~~~~~~~~~~~~~-----------~~~pd 68 (185)
T 3hp4_A 1 MDNTILILGDXLS-AAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISGETSGGALRRLDALLE-----------QYEPT 68 (185)
T ss_dssp -CEEEEEEECTTT-TTTTSCGGGSHHHHHHHHHHHTTCCEEEEECCCTTCCHHHHHHHHHHHHH-----------HHCCS
T ss_pred CCCeEEEECCccc-ccCCCCCcccHHHHHHHHHHhcCCcEEEEECCcCCccHHHHHHHHHHHHh-----------hcCCC
Confidence 6789999999999 6654 35899999998853 48899999999999998888888776 36999
Q ss_pred EEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC--CCCChhhhhcCCCCCCCCCCCccch
Q 026021 75 AVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP--PPIDEEARLKHPYVENPTGLPERTN 152 (244)
Q Consensus 75 ~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
+|+|++|+||... ..+.++|.++++++++.+++. +++|+++++ |+.. ..
T Consensus 69 ~vvi~~G~ND~~~--------~~~~~~~~~~~~~~i~~~~~~--~~~vvl~~~~~p~~~-------------------~~ 119 (185)
T 3hp4_A 69 HVLIELGANDGLR--------GFPVKKMQTNLTALVKKSQAA--NAMTALMEIYIPPNY-------------------GP 119 (185)
T ss_dssp EEEEECCHHHHHT--------TCCHHHHHHHHHHHHHHHHHT--TCEEEEECCCCCSTT-------------------CH
T ss_pred EEEEEeecccCCC--------CcCHHHHHHHHHHHHHHHHHc--CCeEEEEeCCCCCcc-------------------cH
Confidence 9999999999853 457899999999999999998 567888874 3311 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 153 EAAGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 153 ~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
.....||+.++++|++++++++|++..... .....+..||+|||++||++||+.+++.|++.
T Consensus 120 ~~~~~~~~~~~~~a~~~~~~~vd~~~~~~~--~~~~~~~~Dg~Hpn~~G~~~~a~~l~~~l~~~ 181 (185)
T 3hp4_A 120 RYSKMFTSSFTQISEDTNAHLMNFFMLDIA--GKSDLMQNDSLHPNKKAQPLIRDEMYDSIKKW 181 (185)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEECCTTTTTT--TCGGGBCTTSSSBCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEcchhhhcC--CCcccccCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 356799999999999999999999754322 22346789999999999999999999999764
No 8
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=99.97 E-value=1.3e-30 Score=206.44 Aligned_cols=193 Identities=20% Similarity=0.257 Sum_probs=148.1
Q ss_pred CeEEEEcccccccccC--CCChHHHHHHhhccccceEeeccCCcchHH----HHHHHHhhccccCCCcccccccCCccEE
Q 026021 3 PKIYLFGDSITESSFT--YGGWGASLAHHFSRTVDVVLRGYSGYNTRW----AVKVMERVLPAANGESESERERVSTIAV 76 (244)
Q Consensus 3 ~~il~iGDSit~~g~~--~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~pd~v 76 (244)
++|+++|||+| .|++ ..+|+..|++.++ .+.++|.|++|.++.. ...++.+ + ..+||+|
T Consensus 22 ~~i~~lGDSit-~G~g~~~~~~~~~l~~~l~-~~~v~N~g~~G~t~~~~~~~~~~~~~~-~------------~~~pd~V 86 (232)
T 3dc7_A 22 KRPAWLGDSIT-ANNGLATVHYHDILAADWD-VERSDNLGISGSTIGSRYDAMAVRYQA-I------------PEDADFI 86 (232)
T ss_dssp SSEEEEESTTT-STTCSSSSCHHHHHHHHHT-CSCCEEEECTTCCSSTTSSCHHHHGGG-S------------CTTCSEE
T ss_pred ceEEEEccccc-ccCCCCCCcHHHHHHHHhC-CceeEEeeeCCcccccChHHHHHHHHh-c------------CCCCCEE
Confidence 48999999999 6553 2389999999985 3589999999999883 4444443 1 3799999
Q ss_pred EEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHH
Q 026021 77 AVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAG 156 (244)
Q Consensus 77 ii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (244)
+|++|+||...............++|..+++++++.+++..|+++|+++++++......... .......+..+.
T Consensus 87 ii~~G~ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~~P~~~iil~~p~~~~~~~~~~~------~~~~~~~~~~~~ 160 (232)
T 3dc7_A 87 AVFGGVNDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTNWPTVPKLFISAIHIGSDFGGSF------SAVTNGLGYRQS 160 (232)
T ss_dssp EEECCHHHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHHCTTSCEEEEECCCCCSCSBTTB------CSSCCTTSCCHH
T ss_pred EEEEeccccccCcCCccccccchHHHHHHHHHHHHHHHHhCCCCeEEEEeCcccCCccCCcc------cccccccchHHH
Confidence 99999999865321112223467789999999999999999999999999987754321110 011123356788
Q ss_pred HHHHHHHHHHHhcCCCeeechhHhhhh---hhcccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 157 AYAKACIEVAGECGLPVVDLWTKMQQL---ADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 157 ~~~~~~~~~a~~~~v~~iD~~~~~~~~---~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
.|++.++++|++++++|+|++..+... ......+..||+|||++||++||+.|.+.|++.
T Consensus 161 ~~~~~i~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~~~~DgvHpn~~G~~~iA~~i~~~l~~~ 223 (232)
T 3dc7_A 161 DYEAAIAQMTADYGVPHLSLYRDAGMTFAIPAQAAIYSVDTLHPNNAGHRVIARKLQSFLDSH 223 (232)
T ss_dssp HHHHHHHHHHHHHTCCEEEHHHHSSCCTTSHHHHHHHBSSSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEecccccCCCccchhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999986421 122346789999999999999999999999886
No 9
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=99.97 E-value=2e-30 Score=201.12 Aligned_cols=178 Identities=22% Similarity=0.271 Sum_probs=146.4
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccC
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGAN 83 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~N 83 (244)
+|+++|||+| . ||...+.+.+.. ..++|.|++|.++.....++++.+. ..+||+|+|++|+|
T Consensus 24 ~i~~~GDSit-~-----g~~~~~~~~~~~-~~v~n~g~~G~~~~~~~~~~~~~~~-----------~~~pd~vvi~~G~N 85 (204)
T 3p94_A 24 NVVFMGNSIT-D-----GWWPADSTFFIR-NNFVDRGISGQTTSEMLVRFRQDVI-----------NLKPKAVVILAGIN 85 (204)
T ss_dssp EEEEEESHHH-H-----THHHHCTTHHHH-HTEEEEECTTCCHHHHHHHHHHHTG-----------GGCEEEEEEECCHH
T ss_pred eEEEEccchh-h-----cccchHHHhccc-CceEEcccCcccHHHHHHHHHHHHH-----------hCCCCEEEEEeecC
Confidence 8999999999 3 476666666643 4899999999999998888877666 37899999999999
Q ss_pred CCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHH
Q 026021 84 DACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACI 163 (244)
Q Consensus 84 D~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (244)
|..... ...+.++|..+++++++.+++ |+++|++++++|........ ....+..+..||+.++
T Consensus 86 D~~~~~-----~~~~~~~~~~~~~~~i~~~~~--~~~~vil~~~~p~~~~~~~~----------~~~~~~~~~~~n~~l~ 148 (204)
T 3p94_A 86 DIAHNN-----GVIALENVFGNLVSMAELAKA--NHIKVIFCSVLPAYDFPWRP----------GMQPADKVIQLNKWIK 148 (204)
T ss_dssp HHTTTT-----SCCCHHHHHHHHHHHHHHHHH--TTCEEEEECCCCCSCBTTBT----------TCCCHHHHHHHHHHHH
T ss_pred cccccc-----CCCCHHHHHHHHHHHHHHHHh--CCCeEEEEeCCCCCCCCCCc----------cccHHHHHHHHHHHHH
Confidence 997532 235799999999999999998 68899999998886443221 1145678899999999
Q ss_pred HHHHhcCCCeeechhHhhhhhh-cccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 164 EVAGECGLPVVDLWTKMQQLAD-WKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 164 ~~a~~~~v~~iD~~~~~~~~~~-~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
++|+++++.|+|++..+....+ ....+..||+|||++||++||+.+++.|++.
T Consensus 149 ~~a~~~~v~~iD~~~~~~~~~~~~~~~~~~Dg~Hp~~~G~~~~a~~l~~~l~~~ 202 (204)
T 3p94_A 149 EYADKNGLTYVDYHSAMKDERNGLPANLSKDGVHPTLEGYKIMEKIVLEAIHKT 202 (204)
T ss_dssp HHHHHTTCEEECHHHHHCCTTSSCCTTTBSSSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEchhhhhhcccccccccccCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999866543 2346789999999999999999999999764
No 10
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=99.97 E-value=8.6e-30 Score=195.74 Aligned_cols=174 Identities=18% Similarity=0.251 Sum_probs=142.3
Q ss_pred CeEEEEcccccccccCC---CChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEE
Q 026021 3 PKIYLFGDSITESSFTY---GGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVF 79 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~---~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~ 79 (244)
++|+++|||+| .|++. .+|+..|++.++..+.++|.|++|.++.....++++.+.. .+||+|+|+
T Consensus 2 ~~i~~~GDSit-~g~~~~~~~~~~~~l~~~l~~~~~v~n~g~~G~~~~~~~~~~~~~~~~-----------~~pd~Vii~ 69 (190)
T 1ivn_A 2 DTLLILGDSLS-AGYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQ-----------HQPRWVLVE 69 (190)
T ss_dssp EEEEEEECHHH-HCSSSCGGGSHHHHHHHHC-CCEEEEECCCTTCCHHHHHHHHHHHHHH-----------HCCSEEEEE
T ss_pred CcEEEEecCcc-cCCCCCCCcCHHHHHHHHhccCcEEEecCCCCchHHHHHHHHHHHHHh-----------cCCCEEEEE
Confidence 58999999999 66652 4899999999987789999999999999888888877663 679999999
Q ss_pred eccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC-CCChhhhhcCCCCCCCCCCCccchHHHHHH
Q 026021 80 FGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP-PIDEEARLKHPYVENPTGLPERTNEAAGAY 158 (244)
Q Consensus 80 ~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (244)
+|+||... ..+.++|.++++++++.++++ +++|++++++ |.... ......+
T Consensus 70 ~G~ND~~~--------~~~~~~~~~~l~~li~~~~~~--~~~vil~~~~~p~~~~------------------~~~~~~~ 121 (190)
T 1ivn_A 70 LGGNDGLR--------GFQPQQTEQTLRQILQDVKAA--NAEPLLMQIRLPANYG------------------RRYNEAF 121 (190)
T ss_dssp CCTTTTSS--------SCCHHHHHHHHHHHHHHHHHT--TCEEEEECCCCCGGGC------------------HHHHHHH
T ss_pred eecccccc--------CCCHHHHHHHHHHHHHHHHHc--CCCEEEEeccCCcchh------------------HHHHHHH
Confidence 99999953 457899999999999999998 4679988852 22110 1357789
Q ss_pred HHHHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhhcCC
Q 026021 159 AKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTEGL 218 (244)
Q Consensus 159 ~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~~~ 218 (244)
|+.++++|+++++.|+|++..... ....++..||+|||++||++||+.+++.|++...
T Consensus 122 n~~~~~~a~~~~v~~iD~~~~~~~--~~~~~~~~Dg~Hpn~~G~~~~a~~i~~~l~~~~~ 179 (190)
T 1ivn_A 122 SAIYPKLAKEFDVPLLPFFMEEVY--LKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVN 179 (190)
T ss_dssp HHHHHHHHHHTTCCEECCTHHHHH--TCGGGBCTTSSSBCGGGHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHcCCeEEccHHhhcc--CCchhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999754322 1223577999999999999999999999987633
No 11
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=99.97 E-value=1.4e-29 Score=197.63 Aligned_cols=185 Identities=23% Similarity=0.281 Sum_probs=146.9
Q ss_pred CeEEEEcccccccccC------------CCChHHHHHHhhcc-----ccceEeeccCCcchHHHHHHHHhhccccCCCcc
Q 026021 3 PKIYLFGDSITESSFT------------YGGWGASLAHHFSR-----TVDVVLRGYSGYNTRWAVKVMERVLPAANGESE 65 (244)
Q Consensus 3 ~~il~iGDSit~~g~~------------~~~~~~~l~~~~~~-----~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~ 65 (244)
++|+++|||+| .|.+ ..+|+..+++.+.. .+.++|.|++|.++.....++.+.+.
T Consensus 9 ~~i~~~GDSit-~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~g~~G~~~~~~~~~~~~~~~------- 80 (216)
T 3rjt_A 9 SKLVMVGDSIT-DCGRAHPVGEAPRGGLGNGYVALVDAHLQVLHPDWRIRVVNVGTSGNTVADVARRWEDDVM------- 80 (216)
T ss_dssp CEEEEEESHHH-HTTCCSSCEESSTTTTCSSHHHHHHHHHHHHCGGGCCEEEECCCTTCCHHHHHHHHHHHTG-------
T ss_pred CEEEEEecccc-ccCCCcccccccccccCccHHHHHHHHHHhhCCCCCeEEEECCCCCccHHHHHHHHHhHHh-------
Confidence 48999999999 5433 25799999888743 37899999999999998888877666
Q ss_pred cccccCCccEEEEEeccCCCCCCCCCC--CCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCC
Q 026021 66 SERERVSTIAVAVFFGANDACLPDRCG--AFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVEN 143 (244)
Q Consensus 66 ~~~~~~~pd~vii~~G~ND~~~~~~~~--~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~ 143 (244)
..+||+|+|++|+||........ .....+.++|..+++++++.+++. +++|+++++++.....
T Consensus 81 ----~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~vil~~p~~~~~~~--------- 145 (216)
T 3rjt_A 81 ----ALQPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPR--VREMFLLSPFYLEPNR--------- 145 (216)
T ss_dssp ----GGCCSEEEEECCHHHHHHHHHSTTCGGGCCCHHHHHHHHHHHHHHHGGG--SSEEEEECCCCCCCCT---------
T ss_pred ----hcCCCEEEEEeeccccchhhccccccccCCCHHHHHHHHHHHHHHHHhc--CCeEEEECCCcCCCCc---------
Confidence 37899999999999985321000 001456899999999999999998 7889999865443211
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhh--hcccccccccccCChhHHHHHHHHHHHHHh
Q 026021 144 PTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLA--DWKTAYLSDGLHLNETGNRVVFEEVVMKLK 214 (244)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~--~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~ 214 (244)
....+..+..||+.++++|+++++.|+|++..+.... .....+..||+|||++||++||+.+++.|.
T Consensus 146 ----~~~~~~~~~~~n~~~~~~a~~~~~~~vD~~~~~~~~~~~~~~~~~~~Dg~Hpn~~G~~~~a~~l~~~l~ 214 (216)
T 3rjt_A 146 ----SDPMRKTVDAYIEAMRDVAASEHVPFVDVQAEFDRLLAHLNTWVLAPDRVHPYLNGHLVIARAFLTAVG 214 (216)
T ss_dssp ----TSHHHHHHHHHHHHHHHHHHHHTCCEECHHHHHHHHHTTSCHHHHCSSSSSCCHHHHHHHHHHHHHHTT
T ss_pred ----chHHHHHHHHHHHHHHHHHHHcCCeEEEcHHHHHHHHhcCCCcccccCCcCCChHHHHHHHHHHHHHhc
Confidence 1134678899999999999999999999999987642 233467899999999999999999999874
No 12
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=99.96 E-value=9.7e-30 Score=201.80 Aligned_cols=189 Identities=21% Similarity=0.272 Sum_probs=142.5
Q ss_pred eEEEEcccccccccC----CCChHHHHHHhhccccceEeeccCCcchHHHHH--HHHhhccccCCCcccccccCCccEEE
Q 026021 4 KIYLFGDSITESSFT----YGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVK--VMERVLPAANGESESERERVSTIAVA 77 (244)
Q Consensus 4 ~il~iGDSit~~g~~----~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~pd~vi 77 (244)
+|+++|||+| .|+. ..+|...|++.++ +.|+|+|++|.++..... ++++.+.. ...+|+|+
T Consensus 2 ~I~~~GDS~t-~g~~~~~~~~gw~~~l~~~l~--~~v~N~gi~G~tt~~~~~~~r~~~~l~~----------~~~~d~Vi 68 (233)
T 1k7c_A 2 TVYLAGDSTM-AKNGGGSGTNGWGEYLASYLS--ATVVNDAVAGRSARSYTREGRFENIADV----------VTAGDYVI 68 (233)
T ss_dssp EEEEECCTTT-STTTTSTTCCCGGGGSGGGBS--SEEEECCCTTCCHHHHHHTTHHHHHHHH----------CCTTCEEE
T ss_pred EEEEEecCCC-cCCCCCCCCCCHHHHHHHhCC--ceEEecccCCccHHHHHHcccHHHHHhh----------CCCCCEEE
Confidence 7999999999 4443 3589999999887 899999999999987663 56665553 13459999
Q ss_pred EEeccCCCCCCCCCCC-----------------CcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCC
Q 026021 78 VFFGANDACLPDRCGA-----------------FQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPY 140 (244)
Q Consensus 78 i~~G~ND~~~~~~~~~-----------------~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~ 140 (244)
|++|+||......... .+.++.++|+.+++++|+.+++. +++++|++++|......
T Consensus 69 I~~G~ND~~~~~~~~~r~~~~g~g~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--g~~vil~tp~p~~~~~~----- 141 (233)
T 1k7c_A 69 VEFGHNDGGSLSTDNGRTDCSGTGAEVCYSVYDGVNETILTFPAYLENAAKLFTAK--GAKVILSSQTPNNPWET----- 141 (233)
T ss_dssp ECCCTTSCSCGGGCCSCCCBSSSSSCEEEEEETTEEEEEEBHHHHHHHHHHHHHHT--TCEEEEECCCCCCTTTT-----
T ss_pred EEccCCCCCCcCCcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHC--CCEEEEECCCCccccCC-----
Confidence 9999999975310000 01234689999999999999986 46899999987642210
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhhh------cccccccccccCChhHHHHHHHHHHHHHh
Q 026021 141 VENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLAD------WKTAYLSDGLHLNETGNRVVFEEVVMKLK 214 (244)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~------~~~~~~~DgiHpn~~G~~~~a~~l~~~l~ 214 (244)
+ ........|+++++++|++++++|||++..+..... ....+..||+|||++||++||+.+++.|+
T Consensus 142 ~--------~~~~~~~~y~~~~~~vA~~~~v~~iD~~~~~~~~~~~~g~~~~~~~~~~DgiHpn~~G~~~iA~~i~~~l~ 213 (233)
T 1k7c_A 142 G--------TFVNSPTRFVEYAELAAEVAGVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGAEVVAEAFLKAVV 213 (233)
T ss_dssp S--------SCCCCCCHHHHHHHHHHHHHTCEEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHHHHHHHHHHHHHHHH
T ss_pred C--------ccccchHHHHHHHHHHHHHhCCeEEecHHHHHHHHHHhChhhhcccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 0 111234589999999999999999999998764311 12345589999999999999999999998
Q ss_pred hcCCCC
Q 026021 215 TEGLSL 220 (244)
Q Consensus 215 ~~~~~~ 220 (244)
+...+.
T Consensus 214 ~~~~~l 219 (233)
T 1k7c_A 214 CTGTSL 219 (233)
T ss_dssp HHTCGG
T ss_pred hcCccH
Confidence 865443
No 13
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=99.96 E-value=2e-29 Score=197.04 Aligned_cols=177 Identities=25% Similarity=0.407 Sum_probs=143.2
Q ss_pred CeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 3 PKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
++|+++|||+| .|+ +|... ++..+.++|.|++|.++.....++++.+. ..+||+|+|++|+
T Consensus 35 ~~i~~~GDSit-~g~---~~~~~----l~~~~~v~n~g~~G~~~~~~~~~l~~~~~-----------~~~pd~vvi~~G~ 95 (214)
T 2hsj_A 35 PNILFIGDSIV-EYY---PLQEL----FGTSKTIVNRGIRGYQTGLLLENLDAHLY-----------GGAVDKIFLLIGT 95 (214)
T ss_dssp CSEEEEESHHH-HTC---CHHHH----HCSSSCEEEEECTTCCHHHHHHTGGGGCC-----------CSCCCEEEEECCH
T ss_pred CCEEEEecchh-cCC---CHHHH----cCCcceEEecCccchhHHHHHHHhhHHHH-----------hcCCCEEEEEEec
Confidence 48999999999 554 46544 44456789999999999988877776544 3789999999999
Q ss_pred CCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHH
Q 026021 83 NDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKAC 162 (244)
Q Consensus 83 ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (244)
||... ..+.++|.++++++++.+++.+|+++|++++++|+........ ......+..+..||+.+
T Consensus 96 ND~~~--------~~~~~~~~~~l~~~i~~l~~~~p~~~iil~~~~p~~~~~~~~~-------~~~~~~~~~~~~~n~~l 160 (214)
T 2hsj_A 96 NDIGK--------DVPVNEALNNLEAIIQSVARDYPLTEIKLLSILPVNEREEYQQ-------AVYIRSNEKIQNWNQAY 160 (214)
T ss_dssp HHHHT--------TCCHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCCCSGGGHH-------HHTTCCHHHHHHHHHHH
T ss_pred CcCCc--------CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecCCCCccccccc-------ccccccHHHHHHHHHHH
Confidence 99963 3578999999999999999999999999999998865431000 00114567889999999
Q ss_pred HHHHHhc-CCCeeechhHhhhhh-hcccccccccccCChhHHHHHHHHHHHHH
Q 026021 163 IEVAGEC-GLPVVDLWTKMQQLA-DWKTAYLSDGLHLNETGNRVVFEEVVMKL 213 (244)
Q Consensus 163 ~~~a~~~-~v~~iD~~~~~~~~~-~~~~~~~~DgiHpn~~G~~~~a~~l~~~l 213 (244)
+++|+++ ++.|+|++..+.... .+...+..||+|||++||++||+.+++.|
T Consensus 161 ~~~a~~~~~~~~iD~~~~~~~~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~l 213 (214)
T 2hsj_A 161 QELASAYMQVEFVPVFDCLTDQAGQLKKEYTTDGLHLSIAGYQALSKSLKDYL 213 (214)
T ss_dssp HHHHTTCTTEEEECCGGGSBCTTSSBCGGGBSSSSSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEhHHHHhCcCCchhhhccCCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999 999999999886633 23456789999999999999999999887
No 14
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=99.96 E-value=3.6e-29 Score=196.34 Aligned_cols=180 Identities=19% Similarity=0.231 Sum_probs=143.5
Q ss_pred CeEEEEcccccccccC---CCChHHHHHHhhc---cccceEeeccCCcchHHHHHHHHhhccc-cCCCcccccccCCccE
Q 026021 3 PKIYLFGDSITESSFT---YGGWGASLAHHFS---RTVDVVLRGYSGYNTRWAVKVMERVLPA-ANGESESERERVSTIA 75 (244)
Q Consensus 3 ~~il~iGDSit~~g~~---~~~~~~~l~~~~~---~~~~v~n~g~~G~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~pd~ 75 (244)
++|+++|||+| .|++ ..+|...|++.+. ..+.++|.|++|.++.....+++..+.. .. ..+||+
T Consensus 21 ~~i~~lGDSit-~g~~~~~~~~~~~~l~~~l~~~~~~~~v~n~g~~G~t~~~~~~~~~~~~~~~~~--------~~~pd~ 91 (218)
T 1vjg_A 21 IRICFVGDSFV-NGTGDPECLGWTGRVCVNANKKGYDVTYYNLGIRRDTSSDIAKRWLQEVSLRLH--------KEYNSL 91 (218)
T ss_dssp EEEEEEESHHH-HTTTCTTSCHHHHHHHHHHHHTTEEEEEEEEECTTCCHHHHHHHHHHHHHTTCC--------TTSEEE
T ss_pred ceEEEEccccc-cCCCCCCCCCHHHHHHHHHHhcCCCeEEEeCCCCCcCHHHHHHHhHHhhhhhhc--------cCCCCE
Confidence 38999999999 6664 2489999998874 3478999999999999888777663322 10 158999
Q ss_pred EEEEeccCCCCC-CCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHH
Q 026021 76 VAVFFGANDACL-PDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEA 154 (244)
Q Consensus 76 vii~~G~ND~~~-~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
|+|++|+||... .. ....+.++|.++++++++.+++. ++|++++++|+... . ....+..
T Consensus 92 vvi~~G~ND~~~~~~----~~~~~~~~~~~~l~~li~~l~~~---~~iil~~~~p~~~~-~------------~~~~~~~ 151 (218)
T 1vjg_A 92 VVFSFGLNDTTLENG----KPRVSIAETIKNTREILTQAKKL---YPVLMISPAPYIEQ-Q------------DPGRRRR 151 (218)
T ss_dssp EEEECCHHHHCEETT----EESSCHHHHHHHHHHHHHHHHHH---SCEEEECCCCCCCT-T------------CTTHHHH
T ss_pred EEEEecCCcchhhcc----cccCCHHHHHHHHHHHHHHHHHh---CcEEEECCCCcccc-c------------cchHHHH
Confidence 999999999962 11 12567999999999999999998 67999999887320 0 0134678
Q ss_pred HHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccc-cccccCChhHHHHHHHHHHH
Q 026021 155 AGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYL-SDGLHLNETGNRVVFEEVVM 211 (244)
Q Consensus 155 ~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~-~DgiHpn~~G~~~~a~~l~~ 211 (244)
+..||+.++++|+++++.|+|++..+.....+...+. .||+|||++||++||+.|++
T Consensus 152 ~~~~n~~l~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~~DgvHpn~~G~~~~A~~i~~ 209 (218)
T 1vjg_A 152 TIDLSQQLALVCQDLDVPYLDVFPLLEKPSVWLHEAKANDGVHPQAGGYTEFARIVEN 209 (218)
T ss_dssp HHHHHHHHHHHHHHHTCCEECCTGGGSTTSSHHHHHHHTTSSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCcEEehHHhhccchhhhhhccccCCCCCCHHHHHHHHHHHHc
Confidence 8999999999999999999999998877655443344 59999999999999999988
No 15
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=99.96 E-value=7.1e-29 Score=196.57 Aligned_cols=174 Identities=18% Similarity=0.225 Sum_probs=141.4
Q ss_pred CeEEEEcccccccccCC-CChHHHHHHhhccccceEeeccCCcchHHHHHHHHhh-ccccCCCcccccccCCccEEEEEe
Q 026021 3 PKIYLFGDSITESSFTY-GGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERV-LPAANGESESERERVSTIAVAVFF 80 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~-~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~pd~vii~~ 80 (244)
.+|+++|||+| .|+.. ..|...+ . ++.++|.|++|.++.....++++. +. ..+||+|+|++
T Consensus 39 ~~i~~~GDSit-~g~~~~~~~~~~l----~-~~~v~n~g~~G~t~~~~~~~~~~~~l~-----------~~~pd~vvi~~ 101 (232)
T 1es9_A 39 PEVVFIGDSLV-QLMHQCEIWRELF----S-PLHALNFGIGGDSTQHVLWRLENGELE-----------HIRPKIVVVWV 101 (232)
T ss_dssp CSEEEEESHHH-HTHHHHSCHHHHT----G-GGCEEEEECTTCCHHHHHHHHHTTTTT-----------TCCCSEEEEEC
T ss_pred CCEEEEechHh-hccCccccHHHHC----C-CCceEEeecccccHHHHHHHHhcCccc-----------cCCCCEEEEEe
Confidence 48999999999 55432 2455544 2 378999999999999888777763 33 36899999999
Q ss_pred ccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHH
Q 026021 81 GANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAK 160 (244)
Q Consensus 81 G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (244)
|+||.. .+.++|.++++++++.+++.+|+++|++++++|..... ...+..+..+|+
T Consensus 102 G~ND~~----------~~~~~~~~~l~~~i~~l~~~~p~~~ii~~~~~p~~~~~--------------~~~~~~~~~~n~ 157 (232)
T 1es9_A 102 GTNNHG----------HTAEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQHP--------------NPLREKNRRVNE 157 (232)
T ss_dssp CTTCTT----------SCHHHHHHHHHHHHHHHHHHSTTCEEEEECCCCCSSSC--------------CHHHHHHHHHHH
T ss_pred ecCCCC----------CCHHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCCCc--------------hhHHHHHHHHHH
Confidence 999995 36899999999999999999999999999999875331 134567889999
Q ss_pred HHHH-HHHhcCCCeeechhHhhhhhh-cccccccccccCChhHHHHHHHHHHHHHhhcC
Q 026021 161 ACIE-VAGECGLPVVDLWTKMQQLAD-WKTAYLSDGLHLNETGNRVVFEEVVMKLKTEG 217 (244)
Q Consensus 161 ~~~~-~a~~~~v~~iD~~~~~~~~~~-~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~~ 217 (244)
.+++ +|++.++.|+|++..+.+..+ ....+..||+|||++||++||+.|.+.|++..
T Consensus 158 ~l~~~~a~~~~v~~iD~~~~~~~~~g~~~~~~~~Dg~Hpn~~G~~~~a~~i~~~l~~~l 216 (232)
T 1es9_A 158 LVRAALAGHPRAHFLDADPGFVHSDGTISHHDMYDYLHLSRLGYTPVCRALHSLLLRLL 216 (232)
T ss_dssp HHHHHHHSCTTEEEECCCCCCSCTTSCCCTTTBTTSSSBCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhcCCCEEEeChHHhcCCCCCcChhhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999 888899999999988875433 22345679999999999999999999998863
No 16
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=99.96 E-value=7e-29 Score=201.46 Aligned_cols=197 Identities=21% Similarity=0.256 Sum_probs=146.8
Q ss_pred CeEEEEcccccccccC-----CCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEE
Q 026021 3 PKIYLFGDSITESSFT-----YGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVA 77 (244)
Q Consensus 3 ~~il~iGDSit~~g~~-----~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vi 77 (244)
.+|+++|||+| .|++ ..+| ..|++.++ +.++|.|++|.++..+..++++.+... ..+||+|+
T Consensus 27 ~~iv~lGDSiT-~G~~~~~~~~~~w-~~l~~~l~--~~v~N~G~~G~tt~~~~~~~~~~l~~~---------~~~pd~V~ 93 (274)
T 3bzw_A 27 KKVGYIGDSIT-DPNCYGDNIKKYW-DFLKEWLG--ITPFVYGISGRQWDDVPRQAEKLKKEH---------GGEVDAIL 93 (274)
T ss_dssp CEEEEEESTTT-CTTTTGGGCCCHH-HHHHHHHC--CEEEECCCTTCCGGGHHHHHHHHHHHH---------TTTCCEEE
T ss_pred CEEEEEecCcc-cCCCCCCccCccH-HHHHHHhC--CeEEEeecCCCCHHHHHHHHHHHHhcc---------CCCCCEEE
Confidence 48999999999 5553 2468 89999886 899999999999988887777755421 37899999
Q ss_pred EEeccCCCCCCCCCCCC-------------------------cccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCCh
Q 026021 78 VFFGANDACLPDRCGAF-------------------------QHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDE 132 (244)
Q Consensus 78 i~~G~ND~~~~~~~~~~-------------------------~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~ 132 (244)
|++|+||.......... +.++.++|..+++++|+.++++.|+++|+++++++...
T Consensus 94 I~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~lr~~~p~a~Iilitp~~~~~ 173 (274)
T 3bzw_A 94 VFMGTNDYNSSVPIGEWFTEQEEQVLSAHGEMKKMVTRKKRTPVMTQDTYRGRINIGITQLKKLFPDKQIVLLTPLHRSL 173 (274)
T ss_dssp EECCHHHHHTTCCCCCSEEEEEEEEEEEESSCCEEEEEEEEEECCCSSSHHHHHHHHHHHHHHHCTTSEEEEECCCCCCC
T ss_pred EEEecccCcccCCCccccccchhhhhcccchhhcccccccccccCCHHHHHHHHHHHHHHHHHHCCCCeEEEEecccccc
Confidence 99999998653211100 13456789999999999999999999999999987654
Q ss_pred hhhhc---CCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhh-hh--hhccccc---ccccccCChhHHH
Q 026021 133 EARLK---HPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQ-QL--ADWKTAY---LSDGLHLNETGNR 203 (244)
Q Consensus 133 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~-~~--~~~~~~~---~~DgiHpn~~G~~ 203 (244)
..... .+.. ....+.+..+..||+.++++|++.++.|||++..+. .. ......+ ..||+|||++||+
T Consensus 174 ~~~~~~~~~p~~----~~~~~~~~~~~~~n~~i~~~a~~~~v~~vD~~~~~~~~~~~~~~~~~~~~~~~Dg~Hpn~~G~~ 249 (274)
T 3bzw_A 174 ANFGDKNVQPDE----SYQNGCGEYIDAYVQAIKEAGNIWGIPVIDFNAVTGMNPMVEEQLIYFYDAGYDRLHPDTKGQE 249 (274)
T ss_dssp EECSTTEEECCT----TBCCTTSCCHHHHHHHHHHHHHHHTCCEECHHHHTCCCTTSGGGGGGEEETTTEEEEECHHHHH
T ss_pred ccccccccCccc----ccchhhHHHHHHHHHHHHHHHHHcCCCEEcchhhhccCccccccccccccCCCCCcCCCHHHHH
Confidence 21100 0000 001122345789999999999999999999999885 21 1222223 5899999999999
Q ss_pred HHHHHHHHHHhhc
Q 026021 204 VVFEEVVMKLKTE 216 (244)
Q Consensus 204 ~~a~~l~~~l~~~ 216 (244)
+||+.|...|.+.
T Consensus 250 ~iA~~i~~~ll~~ 262 (274)
T 3bzw_A 250 RMARTLMYQLLAL 262 (274)
T ss_dssp HHHHHHHHHGGGS
T ss_pred HHHHHHHHHHhcc
Confidence 9999998887664
No 17
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=99.96 E-value=1.1e-28 Score=195.10 Aligned_cols=174 Identities=16% Similarity=0.211 Sum_probs=141.1
Q ss_pred CeEEEEcccccccccCC-CChHHHHHHhhccccceEeeccCCcchHHHHHHHHhh-ccccCCCcccccccCCccEEEEEe
Q 026021 3 PKIYLFGDSITESSFTY-GGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERV-LPAANGESESERERVSTIAVAVFF 80 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~-~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~pd~vii~~ 80 (244)
.+|+++|||+| .|++. .+|... +. .+.++|.|++|.++...+.++++. +. ..+||+|+|++
T Consensus 40 ~~i~~~GDSit-~g~~~~~~~~~~----~~-~~~v~n~g~~G~t~~~~~~~~~~~~l~-----------~~~pd~vvi~~ 102 (229)
T 1fxw_F 40 PDVLFVGDSMV-QLMQQYEIWREL----FS-PLHALNFGIGGDTTRHVLWRLKNGELE-----------NIKPKVIVVWV 102 (229)
T ss_dssp CSEEEEESHHH-HGGGGSHHHHHH----TG-GGTEEEEECTTCCHHHHHHHHHTTTTS-----------SCCCSEEEEEC
T ss_pred CCEEEEecchh-cCCCCchhHHHH----cC-CCcceeeccCcchHHHHHHHHHcCccc-----------cCCCCEEEEEE
Confidence 48999999999 55542 235443 33 378999999999999888777753 32 37899999999
Q ss_pred ccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHH
Q 026021 81 GANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAK 160 (244)
Q Consensus 81 G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (244)
|+||.. .+.++|..+++++++.+++..|+++|++++++|..... ...+..+..+|+
T Consensus 103 G~ND~~----------~~~~~~~~~l~~~i~~l~~~~p~~~iil~~~~p~~~~~--------------~~~~~~~~~~n~ 158 (229)
T 1fxw_F 103 GTNNHE----------NTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKP--------------NPLRQKNAKVNQ 158 (229)
T ss_dssp CTTCTT----------SCHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCSSSC--------------CHHHHHHHHHHH
T ss_pred ecCCCC----------CCHHHHHHHHHHHHHHHHHHCCCCeEEEEeCCCCCCch--------------hhHHHHHHHHHH
Confidence 999992 36899999999999999999999999999998875331 034567889999
Q ss_pred HHHHHHH-hcCCCeeechhHhhhhh-hcccccccccccCChhHHHHHHHHHHHHHhhcC
Q 026021 161 ACIEVAG-ECGLPVVDLWTKMQQLA-DWKTAYLSDGLHLNETGNRVVFEEVVMKLKTEG 217 (244)
Q Consensus 161 ~~~~~a~-~~~v~~iD~~~~~~~~~-~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~~ 217 (244)
.++++|+ +.++.|+|++..+.... .+...+..||+|||++||++||+.|.+.|++..
T Consensus 159 ~l~~~a~~~~~v~~iD~~~~~~~~~g~~~~~~~~DgvHpn~~G~~~~a~~l~~~l~~~l 217 (229)
T 1fxw_F 159 LLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLL 217 (229)
T ss_dssp HHHHHSSSSSSEEEECCCCSCBCTTSCBCTTTBTTSSSBCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCeEEEeCHHHhhccCCCcchhhcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 9999998 68999999998876532 233456789999999999999999999998863
No 18
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=99.95 E-value=1.8e-27 Score=200.66 Aligned_cols=188 Identities=14% Similarity=0.120 Sum_probs=140.5
Q ss_pred CCeEEEEcccccccccCC----CChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEE
Q 026021 2 RPKIYLFGDSITESSFTY----GGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVA 77 (244)
Q Consensus 2 ~~~il~iGDSit~~g~~~----~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vi 77 (244)
+++|+|+||||| .|++. .+|+..+++.++ ++++|.|++|.++... ..+.+.+. ..+||+||
T Consensus 185 ~~~Iv~~GDSiT-~G~g~~~~~~~w~~~la~~l~--~~viN~GisG~~~~~~-~~~~~~l~-----------~~~pdlVv 249 (385)
T 3skv_A 185 KPHWIHYGDSIC-HGRGAASPSRTWLALAARAEG--LDLQSLSFAADGSHLQ-PMFARLIR-----------DLPADLIS 249 (385)
T ss_dssp CCEEEEEECSSC-TTTTCSSGGGSHHHHHHHHHT--CEEEEECCTGGGGSCC-HHHHHHHH-----------HSCCSEEE
T ss_pred CceEEEEecccc-CCCCCCCCCCCHHHHHHHhcC--CcEEEeecCCCcccHH-HHHHHHHh-----------ccCCCEEE
Confidence 358999999999 66652 479999999887 8899999999443211 23334444 37899999
Q ss_pred EEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHH
Q 026021 78 VFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGA 157 (244)
Q Consensus 78 i~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (244)
|++|+||... ..+.++|.++++++|+.+++.+|+++|+++++++......... ..........+.
T Consensus 250 I~lGtND~~~--------~~~~~~~~~~l~~li~~ir~~~P~a~Illv~p~~~P~~~~~p~-------~~~~~l~~~~~~ 314 (385)
T 3skv_A 250 LRVGTSNFMD--------GDGFVDFPANLVGFVQIIRERHPLTPIVLGSSVYSPFWDELPA-------DDKPTVADYREQ 314 (385)
T ss_dssp EEESHHHHTT--------TCCTTTHHHHHHHHHHHHHTTCSSSCEEEEECCCCTTTTTSCC-------TTSCCHHHHHHH
T ss_pred EEeeccCCCC--------CCCHHHHHHHHHHHHHHHHHHCCCCcEEEEcCCCCcccccCCc-------cchhhHHHHHHH
Confidence 9999999853 2578999999999999999999999999999885421111100 001233455567
Q ss_pred HHHHHHHHHHh--cCCCeeechhHhhhhhh---cccccccccccCChhHHHHHHHHHHHHHhhcCCC
Q 026021 158 YAKACIEVAGE--CGLPVVDLWTKMQQLAD---WKTAYLSDGLHLNETGNRVVFEEVVMKLKTEGLS 219 (244)
Q Consensus 158 ~~~~~~~~a~~--~~v~~iD~~~~~~~~~~---~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~~~~ 219 (244)
+++.++++|++ .++.|+|....+..... ....+..||+|||++||++||+.+++.|++.+..
T Consensus 315 l~~~~~~lA~~g~~~v~~vd~~~l~~~~~~~~~~~~l~~~DGlHPn~~Gy~~mA~~l~~~L~~~g~~ 381 (385)
T 3skv_A 315 VVKVAELLRKHGDQNVHYLDGMRVWGPERGMELYLEKPDKYPTHPNAVGHEIFAESSRREMAALGVL 381 (385)
T ss_dssp HHHHHHHHHHTTCTTEEEECHHHHSCTTCCGGGBCSCTTSCCCSBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCEEEEecHHHcCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence 77788888876 78999998766654321 1235789999999999999999999999987553
No 19
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=99.95 E-value=5.6e-27 Score=197.87 Aligned_cols=184 Identities=21% Similarity=0.259 Sum_probs=142.2
Q ss_pred CeEEEEcccccccc-cC-----CCChHHHHHHhhccc-cceEeeccCCcchHHHHH--HHHhhccccCCCcccccccCCc
Q 026021 3 PKIYLFGDSITESS-FT-----YGGWGASLAHHFSRT-VDVVLRGYSGYNTRWAVK--VMERVLPAANGESESERERVST 73 (244)
Q Consensus 3 ~~il~iGDSit~~g-~~-----~~~~~~~l~~~~~~~-~~v~n~g~~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~p 73 (244)
.+|+++|||+| .| ++ ..+|+..|++.+... ++++|.|++|.++...+. ++++.+. ..+|
T Consensus 163 ~~Iv~lGDSiT-~G~~g~~~~~~~~w~~~L~~~L~~~~~~v~N~GisG~tt~~~l~~~rl~~~l~-----------~~~p 230 (375)
T 2o14_A 163 RTIYVGGDSTV-CNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRNDGQLEAILK-----------YIKP 230 (375)
T ss_dssp CEEEEEECTTT-SCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHSSHHHHHHT-----------TCCT
T ss_pred cEEEEecCccc-cCCcCCCCCCCCCHHHHHHHHhccCCceEEEeccCCCcHhhhhhcccHHHHHH-----------hCCC
Confidence 39999999999 55 43 358999999999753 679999999999987763 6666555 3677
Q ss_pred -cEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccch
Q 026021 74 -IAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTN 152 (244)
Q Consensus 74 -d~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
|+|+|++|+||.... ...+.++|..+|+++|+.++++ +++|+++++++.... + .. ....+
T Consensus 231 ~d~VvI~~G~ND~~~~------~~~~~~~~~~~l~~ii~~lr~~--~a~vilvtP~~~~~~----~--~~-----~~~~~ 291 (375)
T 2o14_A 231 GDYFMLQLGINDTNPK------HKESEAEFKEVMRDMIRQVKAK--GADVILSTPQGRATD----F--TS-----EGIHS 291 (375)
T ss_dssp TCEEEEECCTGGGCGG------GCCCHHHHHHHHHHHHHHHHTT--TCEEEEECCCCCTTC----B--CT-----TSCBC
T ss_pred CCEEEEEEEccCCCcc------CCCCHHHHHHHHHHHHHHHHHC--CCEEEEECCCCcccc----c--Cc-----ccchh
Confidence 999999999999642 1347899999999999999997 578999987654320 0 00 01223
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeechhHhhhhh---h---ccc-ccccccccCChhHHHHHHHHHHHHHhhcC
Q 026021 153 EAAGAYAKACIEVAGECGLPVVDLWTKMQQLA---D---WKT-AYLSDGLHLNETGNRVVFEEVVMKLKTEG 217 (244)
Q Consensus 153 ~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~---~---~~~-~~~~DgiHpn~~G~~~~a~~l~~~l~~~~ 217 (244)
.....|+++++++|++++++|||++..+.... + ... ++..||+|||++||++||+.|++.|++..
T Consensus 292 ~~~~~~~~~i~~lA~~~~v~~iDl~~~~~~~~~~~g~~~~~~~~~~~DgvHpn~~G~~~~A~~i~~~L~~~~ 363 (375)
T 2o14_A 292 SVNRWYRASILALAEEEKTYLIDLNVLSSAYFTSIGPERTLGLYMDGDTLHPNRAGADALARLAVQELKRQG 363 (375)
T ss_dssp CTTSTTHHHHHHHHHHTTCEEECHHHHHHHHHHHHCHHHHHTTBCTTCSSSBBHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCeEEehHHHHHHHHHhcCcccchhhhcCCCCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 44568899999999999999999999876521 1 122 33579999999999999999999998863
No 20
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=99.95 E-value=6.8e-28 Score=188.80 Aligned_cols=167 Identities=22% Similarity=0.227 Sum_probs=131.5
Q ss_pred eEEEEcccccccccC---CCChHHHHHHhhcc---ccceE--------------eeccCCcchHHHHHHHHhhccccCCC
Q 026021 4 KIYLFGDSITESSFT---YGGWGASLAHHFSR---TVDVV--------------LRGYSGYNTRWAVKVMERVLPAANGE 63 (244)
Q Consensus 4 ~il~iGDSit~~g~~---~~~~~~~l~~~~~~---~~~v~--------------n~g~~G~~~~~~~~~l~~~~~~~~~~ 63 (244)
+|+++|||+| .|++ ..+|+..|++.+.. .+.++ |.|++|.++.....++++.+.
T Consensus 7 ~i~~~GDSit-~G~~~~~~~~~~~~l~~~l~~~~~~v~~~~~~~~G~~~~~~~~n~g~~G~~~~~~~~~l~~~l~----- 80 (215)
T 2vpt_A 7 KIMPVGDSCT-EGMGGGEMGSYRTELYRLLTQAGLSIDFVGSQRSGPSSLPDKDHEGHSGWTIPQIASNINNWLN----- 80 (215)
T ss_dssp EEEEEESHHH-HTCSSSTTCTTHHHHHHHHHHTTCEEEECCSEECCCTTCSCCEEEECTTCCHHHHHHHHHHHHH-----
T ss_pred EEEecccccc-cCCCCCCCCchHHHHHHHHHHcCCceEEEecccCCCCCCCCCCccCcCchhHHHHHHHHHHHhh-----
Confidence 8999999999 6665 24799999988753 24555 899999999988888887665
Q ss_pred cccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCC
Q 026021 64 SESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVEN 143 (244)
Q Consensus 64 ~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~ 143 (244)
..+||+|+|++|+||..... ..+.++++++++.+++..|+++|++++++|...
T Consensus 81 ------~~~pd~vvi~~G~ND~~~~~----------~~~~~~l~~li~~i~~~~p~~~ii~~~~~p~~~----------- 133 (215)
T 2vpt_A 81 ------THNPDVVFLWIGGNDLLLNG----------NLNATGLSNLIDQIFTVKPNVTLFVADYYPWPE----------- 133 (215)
T ss_dssp ------HHCCSEEEEECCHHHHHHHC----------CCCHHHHHHHHHHHHHHCTTCEEEEECCCSCSG-----------
T ss_pred ------ccCCCEEEEEccccccCCCC----------ChhHHHHHHHHHHHHHhCCCCEEEEEeCCCChH-----------
Confidence 37899999999999985311 113689999999999999999999999987742
Q ss_pred CCCCCccchHHHHHHHHHHHHHHH-----hcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 144 PTGLPERTNEAAGAYAKACIEVAG-----ECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~a~-----~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
....||+.++++++ +.++.|+|++..+.+.. ..+..||+|||++||++||+.+++.|++.
T Consensus 134 ----------~~~~~n~~l~~~~~~~~~~~~~v~~iD~~~~~~~~~---~~~~~Dg~Hpn~~G~~~~a~~i~~~l~~~ 198 (215)
T 2vpt_A 134 ----------AIKQYNAVIPGIVQQKANAGKKVYFVKLSEIQFDRN---TDISWDGLHLSEIGYKKIANIWYKYTIDI 198 (215)
T ss_dssp ----------GGHHHHTTHHHHHHHHHHTTCCEEEECGGGSCCCHH---HHBCTTSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcc---ccccCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 23345555554444 57899999998875433 35779999999999999999999998765
No 21
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A
Probab=99.92 E-value=1.6e-25 Score=184.48 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=141.9
Q ss_pred eEEEEcccccccccCC-----------------CChHHHHHHhhccc----cceEeeccCCcchHHHHHHHH--------
Q 026021 4 KIYLFGDSITESSFTY-----------------GGWGASLAHHFSRT----VDVVLRGYSGYNTRWAVKVME-------- 54 (244)
Q Consensus 4 ~il~iGDSit~~g~~~-----------------~~~~~~l~~~~~~~----~~v~n~g~~G~~~~~~~~~l~-------- 54 (244)
+|+++|||+| .|++. .+|+..+++.++.. ++++|.|.+|.++...+....
T Consensus 7 ~~valGDS~t-aG~g~~~~~~~~~~~~~c~rs~~~y~~~la~~l~~~~~~~~~~~n~a~sG~tt~~~~~~~~~~~~~~~~ 85 (306)
T 1esc_A 7 PTVFFGDSYT-ANFGIAPVTNQDSERGWCFQAKENYPAVATRSLADKGITLDVQADVSCGGALIHHFWEKQELPFGAGEL 85 (306)
T ss_dssp EEEECCSHHH-HTTTCSSBTTTTSGGGGGTCBTTCHHHHHHHHHHTTTCEEEEEEECCCTTCCGGGGTSCEECGGGCCEE
T ss_pred eEEEECchhh-hCCCCCCCCCCcCCCCCCcCCccCHHHHHHHHhccccCCcceEEEeeccCccccccccccccccccccc
Confidence 7999999999 66541 36999999998743 789999999999986543210
Q ss_pred -hhccccCCCcccccccCCccEEEEEeccCCCCCC-------CC--------CCC---------------------Cccc
Q 026021 55 -RVLPAANGESESERERVSTIAVAVFFGANDACLP-------DR--------CGA---------------------FQHV 97 (244)
Q Consensus 55 -~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~-------~~--------~~~---------------------~~~~ 97 (244)
..+.. +..++|+|+|++|+||+... .. .+. ....
T Consensus 86 ~~ql~~---------l~~~~dlV~i~iGgND~~~~~~~~~c~~~~~~~~~~~~~p~~~~~~~~~c~~~~~~~~~~~~~~~ 156 (306)
T 1esc_A 86 PPQQDA---------LKQDTQLTVGSLGGNTLGFNRILKQCSDELRKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDD 156 (306)
T ss_dssp CCGGGG---------CCTTCCEEEECCCHHHHTHHHHHHHTCTTTTSSCSSCCCCSSTTSCGGGHHHHTTTSHHHHHHHH
T ss_pred hhHHHh---------ccCCCCEEEEEecCCcccHHHHHHHHhccccccccccCCcccccccCCcchhhhhcccchHHHHH
Confidence 01111 14689999999999998421 00 000 0000
Q ss_pred ChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhh-hcCC--CCCC--C--CCC---CccchHHHHHHHHHHHHHHH
Q 026021 98 PLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEAR-LKHP--YVEN--P--TGL---PERTNEAAGAYAKACIEVAG 167 (244)
Q Consensus 98 ~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~-~~~~--~~~~--~--~~~---~~~~~~~~~~~~~~~~~~a~ 167 (244)
..++|..+++.+++.++++.|+++|++++.|++..... ..+. .+.. . ... ....+..+..+|+.++++|+
T Consensus 157 ~~~~~~~~l~~il~~ir~~~p~a~I~lvgyp~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~A~ 236 (306)
T 1esc_A 157 QFERVGAELEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAA 236 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEeCChhccCCCCCCCcCccccccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 12448999999999999999999999999886543211 0000 0000 0 011 22356788999999999999
Q ss_pred hcCCCeeechhHhhhhh------hcccc------------cccccccCChhHHHHHHHHHHHHHhhc
Q 026021 168 ECGLPVVDLWTKMQQLA------DWKTA------------YLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 168 ~~~v~~iD~~~~~~~~~------~~~~~------------~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
++++.|||++..+..+. .|... ...|++|||++||+.||+.|.+.|++.
T Consensus 237 ~~g~~~vD~~~~f~~~~~c~~~~~w~~~~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~v~~~l~~~ 303 (306)
T 1esc_A 237 DGGADFVDLYAGTGANTACDGADRGIGGLLEDSQLELLGTKIPWYAHPNDKGRDIQAKQVADKIEEI 303 (306)
T ss_dssp TTTCEEECTGGGCTTSSTTSTTSCSBCCSSSEEEEESSSCEEECSSCBCHHHHHHHHHHHHHHHHHH
T ss_pred HcCCEEEeCcccccCCCCCCCchhhhhcccccccccccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999876543 22221 237999999999999999999999764
No 22
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=99.91 E-value=8.3e-24 Score=176.68 Aligned_cols=180 Identities=14% Similarity=0.207 Sum_probs=121.1
Q ss_pred CeEEEEcccccccccCC-----------------CChHHHHHHhhccccceEeeccCCcch---------HHHHHHHHhh
Q 026021 3 PKIYLFGDSITESSFTY-----------------GGWGASLAHHFSRTVDVVLRGYSGYNT---------RWAVKVMERV 56 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~-----------------~~~~~~l~~~~~~~~~v~n~g~~G~~~---------~~~~~~l~~~ 56 (244)
++|+++||||| .|++. .+|+..+++.++.. +.+.+++|.+. .....++++.
T Consensus 123 ~~I~~iGDSiT-~G~g~~~~~~~~~~~~~~~~~~~~y~~~la~~L~~~--~~~~~~sG~~~~~n~g~~g~~~~~~~~~~~ 199 (341)
T 2wao_A 123 RKIEFIGDSIT-CAYGNEGTSKEQSFTPKNENSYMSYAAITARNLNAS--ANMIAWSGIGLTMNYGGAPGPLIMDRYPYT 199 (341)
T ss_dssp EEEEEEESHHH-HTTTTTCCCTTSCCCGGGCCGGGSHHHHHHHHTTEE--EEEEECTTCCSSCCGGGCCCCCHHHHTTEE
T ss_pred ceEEEEccccc-cCCCccCCCcCCCCCcccccchhhhHHHHHHHhCCc--eeEEeeccceEEecCCCCCCCChhHHhhhc
Confidence 38999999999 66641 37999999999744 44444443221 1223333333
Q ss_pred ccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhh
Q 026021 57 LPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARL 136 (244)
Q Consensus 57 ~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~ 136 (244)
.... ...+.....+||+|||++|+||.... ..+.++|..+|+++|+.+++++|+++|+++++|+.......
T Consensus 200 ~~~~--~~~~d~~~~~PdlVvI~lGtND~~~~-------~~~~~~~~~~l~~li~~ir~~~p~a~Iil~~pp~~~~~~~~ 270 (341)
T 2wao_A 200 LPYS--GVRWDFSKYVPQVVVINLGTNDFSTS-------FADKTKFVTAYKNLISEVRRNYPDAHIFCCVGPMLWGTGLD 270 (341)
T ss_dssp ETTT--TEECCGGGCCCSEEEEECCHHHHSSS-------CCCHHHHHHHHHHHHHHHHHHCTTCEEEEEECSSCCHHHHH
T ss_pred cCCC--cccccccCCCCCEEEEeCccccCCCC-------CCCHHHHHHHHHHHHHHHHHHCCCCeEEEEeCCCcCCchhh
Confidence 2100 00000113789999999999999642 13468999999999999999999999999997766532111
Q ss_pred cCCCCCCCCCCCccchHHHHHHHHHHHHHH--HhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHh
Q 026021 137 KHPYVENPTGLPERTNEAAGAYAKACIEVA--GECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLK 214 (244)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~ 214 (244)
. ....+++.+++++ .+.++.|+|++..+. ..+..||+|||++||++||+.+++.|+
T Consensus 271 -------------~---~~~~i~~~~~~~~~a~~~~v~~vD~~~~~~------~~~~~DglHPn~~G~~~mA~~l~~~l~ 328 (341)
T 2wao_A 271 -------------L---CRSYVTEVVNDCNRSGDLKVYFVEFPQQDG------STGYGEDWHPSIATHQLMAERLTAEIK 328 (341)
T ss_dssp -------------H---HHHHHHHHHHHHHHTTCCSEEEEECCCCCS------TTCCCGGGCCCHHHHHHHHHHHHHHHH
T ss_pred -------------H---HHHHHHHHHHHHHhcCCCcEEEEEcccccC------ccCcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 1 1123334444443 356799999875431 234589999999999999999999998
Q ss_pred hc
Q 026021 215 TE 216 (244)
Q Consensus 215 ~~ 216 (244)
+.
T Consensus 329 ~~ 330 (341)
T 2wao_A 329 NK 330 (341)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 23
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=99.90 E-value=1.9e-23 Score=174.85 Aligned_cols=175 Identities=15% Similarity=0.141 Sum_probs=119.8
Q ss_pred CeEEEEcccccccccCC----------------CChHHHHHHhhccccceEeeccCCcc---------h-HHHHHHHHhh
Q 026021 3 PKIYLFGDSITESSFTY----------------GGWGASLAHHFSRTVDVVLRGYSGYN---------T-RWAVKVMERV 56 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~----------------~~~~~~l~~~~~~~~~v~n~g~~G~~---------~-~~~~~~l~~~ 56 (244)
++|+|+||||| .|++. .+|+..+++.++.. +.+.+.+|.. . ......+++.
T Consensus 133 ~~I~~iGDSIT-~G~g~~~~~~~~~~~~~~~~~~~y~~~la~~L~~~--~~~~~~sG~gv~~~~~g~~~~~~~~~~~~r~ 209 (347)
T 2waa_A 133 RKILVLGDSVT-CGEAIDRVAGEDKNTRWWNARESYGMLTAKALDAQ--VQLVCWGGRGLIRSWNGKTDDANLPDFYQFT 209 (347)
T ss_dssp EEEEEEESTTT-TTTTTTCCTTSCCCGGGCCSTTSHHHHHHHHTTEE--EEEEECTTCCSSCCTTSCSSSCCHHHHTTBS
T ss_pred ceEEEeecccc-ccCCCCCCCCCCCCccccchhhhhHHHHHHHhCCc--hheEeecCceEEeccCCCCCCCCHHHHHHhh
Confidence 38999999999 66641 38999999999854 4444444321 1 1223344444
Q ss_pred ccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhh
Q 026021 57 LPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARL 136 (244)
Q Consensus 57 ~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~ 136 (244)
.........+.....+||+|||++|+||.... ..+.++|.++|+++|+.+++++|+++|+++++|+....
T Consensus 210 ~~~~~~~~~~d~~~~~Pd~VvI~lG~ND~~~~-------~~~~~~~~~~l~~li~~ir~~~p~~~I~l~~~p~~~~~--- 279 (347)
T 2waa_A 210 LGDTGQAPQWDHHRYQPDLIISAIGTNDFSPG-------IPDRATYINTYTRFVRTLLDNHPQATIVLTEGAILNGD--- 279 (347)
T ss_dssp SCCSTTCCBCCGGGCCCSEEEECCCHHHHSSS-------CCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSSCCHH---
T ss_pred ccccCCCccCccccCCCCEEEEEccccCCCCC-------CCcHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCccCCc---
Confidence 31100000001113689999999999999642 23468999999999999999999999999987554322
Q ss_pred cCCCCCCCCCCCccchHHHHHHHHHHHHHHHhc---CCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHH
Q 026021 137 KHPYVENPTGLPERTNEAAGAYAKACIEVAGEC---GLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKL 213 (244)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l 213 (244)
....+++.+++++++. ++.|+|+.... ... ||+|||++||++||+.+++.|
T Consensus 280 -----------------~~~~~~~~i~~~~~~~~~~~v~~id~~~~~------~~~---DglHPn~~G~~~~A~~l~~~l 333 (347)
T 2waa_A 280 -----------------KKAALVSYIGETRQQLHSNRVFYASSSHHP------GDN---SDAHPTKDQHAAMARELTPQL 333 (347)
T ss_dssp -----------------HHHHHHHHHHHHHHHHCCTTEEECCCCCCC------CBT---TBSSCCHHHHHHHHHHHHHHH
T ss_pred -----------------hhhHHHHHHHHHHHHhCCCCEEEEEccCcC------CCC---CCCCcCHHHHHHHHHHHHHHH
Confidence 1235566666666654 67888876432 111 999999999999999999999
Q ss_pred hhc
Q 026021 214 KTE 216 (244)
Q Consensus 214 ~~~ 216 (244)
++.
T Consensus 334 ~~~ 336 (347)
T 2waa_A 334 RQI 336 (347)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 24
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=99.87 E-value=1e-21 Score=165.43 Aligned_cols=181 Identities=14% Similarity=0.177 Sum_probs=115.6
Q ss_pred CeEEEEcccccccccC-------------------CCChHHHHHHhhccccceEeeccCCcch---------H-HHHHHH
Q 026021 3 PKIYLFGDSITESSFT-------------------YGGWGASLAHHFSRTVDVVLRGYSGYNT---------R-WAVKVM 53 (244)
Q Consensus 3 ~~il~iGDSit~~g~~-------------------~~~~~~~l~~~~~~~~~v~n~g~~G~~~---------~-~~~~~l 53 (244)
++|+|+||||| .|++ ..+|+..+++.++.. +.+.+.+|.+. . .....+
T Consensus 143 ~~I~~iGDSIT-~G~g~~~~~~~~~~~~~~~~~~~~~~y~~~la~~L~~~--~~~~~~sG~~v~~~~gg~~~g~~~~~~~ 219 (366)
T 2w9x_A 143 RQIEFIGDSFT-VGYGNTSPSRECTDEELFKTTNSQMAFGPLTAKAFDAD--YQINASSGFGIVRNYNGTSPDKSLLSLY 219 (366)
T ss_dssp CEEEEEESHHH-HTTTTTCSCSCCCHHHHHHHCCGGGSHHHHHHHHHTCE--EEEEECTTCCSSCCGGGCSTTCCHHHHT
T ss_pred ceEEEEecccc-ccCcccCCCCCCCcccccceecccccHHHHHHHHhCCc--eeEEeecCceEEeCCCCCCCCCCHHHHH
Confidence 38999999999 6664 247999999999854 44444444321 0 122333
Q ss_pred HhhccccCCCccccc-ccCCccEEEEEeccCCCCCCCCCCCC-c--ccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 54 ERVLPAANGESESER-ERVSTIAVAVFFGANDACLPDRCGAF-Q--HVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~pd~vii~~G~ND~~~~~~~~~~-~--~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
.+...+.. .... ...+||+|||++|+||.......... . ..+.++|..+|+++|+.+|+++|+++|+++++|.
T Consensus 220 ~r~~~~~~---~~~~~~~~~Pd~VvI~lGtND~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ir~~~p~a~Iil~~pp~ 296 (366)
T 2w9x_A 220 PYTLNNPD---QLYHNKHWKPQVIVIGLGTNDFSTALNDNERWKTREALHADYVANYVKFVKQLHSNNARAQFILMNSDQ 296 (366)
T ss_dssp TBSSSSTT---CBCCCTTCCCSEEEEECCHHHHSSCCCTTSSCCSHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEESC
T ss_pred HHhcCCCc---cccccccCCCCEEEEeCccCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 33211000 0000 03689999999999997543210000 0 0125799999999999999999999999998654
Q ss_pred CChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHHHH
Q 026021 130 IDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEV 209 (244)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l 209 (244)
.. . ...+.++++.+.+++ +...++.++|+. + .....|++|||++||++||+.+
T Consensus 297 ~~-~----------------~~~~~i~~~~~~~~~-~~~~~v~~vd~~-------~--~~~~~dd~HPn~~G~~~mA~~l 349 (366)
T 2w9x_A 297 SN-G----------------EIAEQVGKVVAQLKG-GGLHQVEQIVFK-------G--LDYSGCHWHPSANDDQLLANLL 349 (366)
T ss_dssp GG-G----------------HHHHHHHHHHHHHHH-TTCCCEEEEEEC-------C--CCCCBGGGBCCHHHHHHHHHHH
T ss_pred cC-c----------------hHHHHHHHHHHHHHh-cCCCcEEEEEcc-------C--CCCCCCCCCcCHHHHHHHHHHH
Confidence 42 1 112233333333322 234578899974 1 1245677999999999999999
Q ss_pred HHHHhhc
Q 026021 210 VMKLKTE 216 (244)
Q Consensus 210 ~~~l~~~ 216 (244)
++.|++.
T Consensus 350 ~~~I~~~ 356 (366)
T 2w9x_A 350 ITHLQQK 356 (366)
T ss_dssp HHHHHTB
T ss_pred HHHHHHh
Confidence 9999875
No 25
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=99.41 E-value=1.1e-11 Score=99.34 Aligned_cols=194 Identities=13% Similarity=0.112 Sum_probs=133.0
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhh-----cccc-CCC--------ccccc-
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERV-----LPAA-NGE--------SESER- 68 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~-----~~~~-~~~--------~~~~~- 68 (244)
||||||.|+|.... ......|.+..+.++.+.+..++|++..+........ +.+. ..+ +..+.
T Consensus 12 rVL~IGNS~t~n~~--p~~l~~la~a~g~~~~v~~~~igG~~L~~H~~~~~~~~~~~~y~k~~~~g~~~~~~~~~~~~~L 89 (271)
T 4i8i_A 12 KVLAIGNSFSQDAV--EQYLHELGEAEGITMIIGNMFIGGCSLERHVQNIRNNAPAYAYRKVEKDGEKTETRSMTIEKAL 89 (271)
T ss_dssp EEEEEESHHHHHHH--SSSHHHHHHTTTCEEEEEEEECTTCCHHHHHHHHHTTCCCEEEEEECTTSCEEEEEEECHHHHH
T ss_pred EEEEECCCCCcCcH--HHHHHHHHHhcCCceEEEEEecCCccHHHHHhccccccccccccccccCCccccccchhHHHHh
Confidence 89999999993222 2455666666666788889999999988776555432 1100 000 00000
Q ss_pred ccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC-CCceEEEEcCCCCChhhh-hcCCCCCCCCC
Q 026021 69 ERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW-PNTLVLLITPPPIDEEAR-LKHPYVENPTG 146 (244)
Q Consensus 69 ~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~-p~~~vil~~~~~~~~~~~-~~~~~~~~~~~ 146 (244)
...++|+||++=++.-. ...+.|...++++++.+|+.. |++++++..+-....... ..+. .
T Consensus 90 ~~~~wD~VilQe~S~~~-----------~~~~~~~~~~~~l~~~ir~~~~p~ak~il~~TWa~~~~~~~~~f~------~ 152 (271)
T 4i8i_A 90 ADEKWDYISVQQASPLS-----------GIYDSYKASLPELVNYIRERIGKETVLMMHQTWAYATNANHTGFK------N 152 (271)
T ss_dssp HHSCCSEEEECCCGGGT-----------TCHHHHHHHHHHHHHHHHTTSCTTCEEEEEECCCCCTTCCCGGGG------G
T ss_pred hcCCCCEEEeCCCCCCC-----------CCHHHHHHHHHHHHHHHHhhcCCCCEEEEEeccCCCCCCCccccc------c
Confidence 13789999999554322 147889999999999999998 999999997744332210 0000 0
Q ss_pred CCccchHHHHHHHHHHHHHHHhcCC-CeeechhHhhhhhh--cccccccccccCCh-hHHHHHHHHHHHHHhhc
Q 026021 147 LPERTNEAAGAYAKACIEVAGECGL-PVVDLWTKMQQLAD--WKTAYLSDGLHLNE-TGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~a~~~~v-~~iD~~~~~~~~~~--~~~~~~~DgiHpn~-~G~~~~a~~l~~~l~~~ 216 (244)
......++.+.+.+.+++++.+.++ .+++.-.++..... ....+..||+|||. .|.-+.|-.++..|-..
T Consensus 153 ~~~~~~~m~~~l~~ay~~~a~~~~~~~viPvG~a~~~~~~~~p~~~l~~Dg~Hps~~~GsYLaA~v~y~~L~g~ 226 (271)
T 4i8i_A 153 YDQNQMKMYTSIVDAVKKAANLVGIKKIIPSGTAIQNARTSFIGDHMNRDGYHLDLTIGRYTAACTWFEALTHR 226 (271)
T ss_dssp GTTCHHHHHHHHHHHHHHHHHHHTCCEEEEHHHHHHHHHHSTTCSCCBSSSSSBCTTHHHHHHHHHHHHHHHCC
T ss_pred cCccHHHHHHHHHHHHHHHHHhcCCCEEeeHHHHHHHHHHhCcCccccCCCCCCCCccCHHHHHHHHHHHHhCC
Confidence 0112336778889999999999888 59999988866421 22245599999999 99999999999999765
No 26
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa}
Probab=99.40 E-value=2.8e-12 Score=115.12 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=99.4
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCcc
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPER 150 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (244)
..-.+++|++|.||+..... ...........++...|+++.+.+- -+|+|++.||+++.+... ...+.+.
T Consensus 145 ~~~sL~~v~iG~ND~~~~~~---~~~~~~~~~v~~~~~~v~~L~~~Ga-r~~~v~~~pp~gc~P~~~------~~~c~~~ 214 (632)
T 3kvn_X 145 DPNALYYITGGGNDFLQGRI---LNDVQAQQAAGRLVDSVQALQQAGA-RYIVVWLLPDLGLTPATF------GGPLQPF 214 (632)
T ss_dssp CTTSEEEECCSHHHHHTTCC---CSHHHHHHHHHHHHHHHHHHHHTTC-CCEEEECCCCGGGSTTTT------TSTTHHH
T ss_pred CCCCEEEEEEechhhhcccc---cChHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCccccc------CCCchHH
Confidence 46689999999999753210 0112345677888888888888753 369999999998876521 1245667
Q ss_pred chHHHHHHHHHHHHHHHhcC--CCeeechhHhhhhh-------------------------------------hcccccc
Q 026021 151 TNEAAGAYAKACIEVAGECG--LPVVDLWTKMQQLA-------------------------------------DWKTAYL 191 (244)
Q Consensus 151 ~~~~~~~~~~~~~~~a~~~~--v~~iD~~~~~~~~~-------------------------------------~~~~~~~ 191 (244)
.+.....||+.+++.+++.+ +.++|++..+.+.- +..++++
T Consensus 215 ~n~~~~~~N~~L~~~l~~l~~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~~C~~~~~~~~~~~C~~~~~y~f 294 (632)
T 3kvn_X 215 ASQLSGTFNAELTAQLSQAGANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLF 294 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCTTSCBCTTTSTTSSSCCGGGCSB
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCCccCCcccccccccCCCccceEE
Confidence 88899999999999998755 77899998865421 0124577
Q ss_pred cccccCChhHHHHHHHHHHHHHh
Q 026021 192 SDGLHLNETGNRVVFEEVVMKLK 214 (244)
Q Consensus 192 ~DgiHpn~~G~~~~a~~l~~~l~ 214 (244)
.|++|||+++|++||+.++..|.
T Consensus 295 wD~~HpTe~~~~~ia~~~~~~~~ 317 (632)
T 3kvn_X 295 NDSVHPTITGQRLIADYTYSLLS 317 (632)
T ss_dssp SSSSCBCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHhccC
Confidence 89999999999999999998764
No 27
>1zmb_A Acetylxylan esterase related enzyme; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.61A {Clostridium acetobutylicum} SCOP: c.23.10.7
Probab=98.50 E-value=7e-06 Score=66.30 Aligned_cols=168 Identities=13% Similarity=0.092 Sum_probs=109.5
Q ss_pred hHHHHHHhh-ccccceEeeccCCcchHHHH---HHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCccc
Q 026021 22 WGASLAHHF-SRTVDVVLRGYSGYNTRWAV---KVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHV 97 (244)
Q Consensus 22 ~~~~l~~~~-~~~~~v~n~g~~G~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~ 97 (244)
+...|.+.+ ...+-+++.+.+|..+.... ..+...+.... .........-|++.=|.+|... .
T Consensus 60 Fa~~L~~~l~~vpVGlI~~a~GGT~Ie~W~~~~~ly~~~l~~~~----~a~~~~~ikGvlWyQGEsd~~~--------~- 126 (290)
T 1zmb_A 60 FADAWSQKNQEDIIGLIPCAEGGSSIDEWALDGVLFRHALTEAK----FAMESSELTGILWHQGESDSLN--------G- 126 (290)
T ss_dssp HHHHHHHSCSSSEEEEEECCCTTCCGGGGCTTSHHHHHHHHHHH----HHHTSSEEEEEEEECCGGGSSS--------S-
T ss_pred HHHHHHHhCCCCCEEEEEccCCCeeHHHhCCCcccHHHHHHHHH----HhccCCCeeEEEEEecCCCcCC--------C-
Confidence 456676666 44688999999997554210 01111111000 0000367899999999999942 1
Q ss_pred ChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHh-cCCCee
Q 026021 98 PLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGE-CGLPVV 174 (244)
Q Consensus 98 ~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~v~~i 174 (244)
+.+.|...+..+|+..|+.. |+.+++++..++.... . . .+ ..-.....+++++++++.+ .++.++
T Consensus 127 ~~~~Y~~~l~~lI~~wR~~~~~~~lPf~~vql~~~~~~-~-~--~~--------~~~~~~~~ireaQ~~~~~~~pn~~~v 194 (290)
T 1zmb_A 127 NYKVYYKKLLLIIEALRKELNVPDIPIIIGGLGDFLGK-E-R--FG--------KGCTEYNFINKELQKFAFEQDNCYFV 194 (290)
T ss_dssp CSTTHHHHHHHHHHHHHHHTTCSSSCEEEECCCTTTTT-S-G--GG--------TTCTTHHHHHHHHHHHHHHSTTEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcCCC-C-c--cc--------cccchHHHHHHHHHHHHHhCCCEEEE
Confidence 46789999999999999986 7889999998776511 0 0 00 0001256788888888765 455566
Q ss_pred echhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhhcCCCCCCC
Q 026021 175 DLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTEGLSLENL 223 (244)
Q Consensus 175 D~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~~~~~~~~ 223 (244)
+... . ....|++|||.+|++.+++.++....+.-...+.+
T Consensus 195 ~t~d-------l--~~~~d~iHp~~~~k~~vG~RlA~~al~~~yg~~~~ 234 (290)
T 1zmb_A 195 TASG-------L--TCNPDGIHIDAISQRKFGLRYFEAFFNRKHVLEPL 234 (290)
T ss_dssp CCTT-------C--CBCTTSSSBCHHHHHHHHHHHHHHHHHTCCBCSCC
T ss_pred EcCC-------C--CCCCCCcCCCchHHHHHHHHHHHHHHHHhcCCCCc
Confidence 6521 1 12368999999999999999999988764443333
No 28
>2apj_A Putative esterase; AT4G34215, CAR esterase family 6, structural genomics, protein structure initiative, CESG; HET: SEB; 1.60A {Arabidopsis thaliana} SCOP: c.23.10.7
Probab=97.83 E-value=0.00097 Score=52.87 Aligned_cols=149 Identities=15% Similarity=0.174 Sum_probs=92.7
Q ss_pred hHHHHHHhh---ccccceEeeccCCcchHHHH---HHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCc
Q 026021 22 WGASLAHHF---SRTVDVVLRGYSGYNTRWAV---KVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQ 95 (244)
Q Consensus 22 ~~~~l~~~~---~~~~~v~n~g~~G~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~ 95 (244)
+...|.+.+ ...+-+++.+.+|..+.... ..+...+..... .........-|+..=|.+|...
T Consensus 98 Fg~~L~~~l~~~~vpVglI~~A~GGt~i~~W~~~~~ly~~~i~~~~~---al~~~~~ikGvlWyQGEsn~~~-------- 166 (260)
T 2apj_A 98 FANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEE---SRKCGGEIKAVLWYQGESDVLD-------- 166 (260)
T ss_dssp HHHHHHHHHTCTTCCEEEEECCCTTCCGGGGSTTSHHHHHHHHHHHH---HGGGSCEEEEEEEECCGGGSSS--------
T ss_pred HHHHHHHhhccCCCeEEEEEeCCCCCcHHHHCCCcchHHHHHHHHHH---hhccCCceEEEEEecCCCCCCC--------
Confidence 566777665 44588999999997654211 011111111000 0000256788999999999842
Q ss_pred ccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHh---cC
Q 026021 96 HVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGE---CG 170 (244)
Q Consensus 96 ~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~---~~ 170 (244)
..+.+.|...+..+|+..|+.. |+.+++++..++... ++..++++..+ -+
T Consensus 167 ~~~~~~Y~~~l~~lI~~wR~~~~~~~lPf~~vql~~~~~-------------------------~~~~iReaQ~~~~~pn 221 (260)
T 2apj_A 167 IHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGG-------------------------YIDKVREAQLGLKLSN 221 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTCCEEEEECSCCCT-------------------------THHHHHHHHHHCCCTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeccccc-------------------------hHHHHHHHHHhccCCC
Confidence 1236899999999999999974 678899998876521 12344443332 22
Q ss_pred CCeeechhHhhhhhhcccccccccccCChhHHHHHHHHHHHHHhh
Q 026021 171 LPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKT 215 (244)
Q Consensus 171 v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~ 215 (244)
+.++.. .+. ....|++||+.+|++.+++.++....+
T Consensus 222 ~~~v~t-------~dl--g~~~D~iHp~~k~~~~vG~RlA~~al~ 257 (260)
T 2apj_A 222 VVCVDA-------KGL--PLKSDNLHLTTEAQVQLGLSLAQAYLS 257 (260)
T ss_dssp EEEEEC-------TTS--CBCTTSSSBCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEc-------cCC--CCCCCCcCCCcHHHHHHHHHHHHHHHH
Confidence 333332 111 234689999999999999999887654
No 29
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics, D-alanyl-lipoteichoic acid biosynthesis structure initiative, PSI-2; 2.24A {Streptococcus pneumoniae}
Probab=97.63 E-value=0.00053 Score=57.50 Aligned_cols=95 Identities=13% Similarity=0.109 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHhhCCCceEEEEcCCCCCh-hhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCC-CeeechhHh
Q 026021 103 KHNLHSIVSFLKNRWPNTLVLLITPPPIDE-EARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGL-PVVDLWTKM 180 (244)
Q Consensus 103 ~~~l~~~v~~~~~~~p~~~vil~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v-~~iD~~~~~ 180 (244)
...++-+++.+++. +++|+++.+|--+. ..... -..++...+.+.++..|+++|+ .++|+..
T Consensus 275 y~Dlql~L~~~k~~--~~~vlfVi~PVNgkWydytG------------l~~e~r~~~~~KIk~~l~s~Gf~~i~D~s~-- 338 (407)
T 3bma_A 275 YNDLQLVLTQFSKS--KVNPIFIIPPVNKKWMDYAG------------LREDMYQQTVQKIRYQLESQGFTNIADFSK-- 338 (407)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECCCCHHHHHHTT------------CCHHHHHHHHHHHHHHHHTTTCCCEEECTT--
T ss_pred HHHHHHHHHHHHHc--CCceEEEEeCCchHHHHhcC------------CCHHHHHHHHHHHHHHHHHCCCcceeeccc--
Confidence 46789999999998 57788887765542 22222 2346788999999999999999 9999953
Q ss_pred hhhhhcccccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 181 QQLADWKTAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 181 ~~~~~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
.+...+++.|.+||+..|.-.+-+.|.+.+.+.
T Consensus 339 ---~~yepYfm~DtiHlGw~GWv~~Dk~I~~f~~~~ 371 (407)
T 3bma_A 339 ---DGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNP 371 (407)
T ss_dssp ---CTTSTTCBSSSSCBCTTHHHHHHHHHHHHHHSC
T ss_pred ---cCCCCceeeecccCchhHHHHHHHHHHHHHhCC
Confidence 445668999999999999999999999999885
No 30
>3pt5_A NANS (YJHS), A 9-O-acetyl N-acetylneuraminic acid; SGNH hydrolase, 9-O-acetyl N-acetylneuraminic acid esterase, structural genomics; 1.60A {Escherichia coli O157}
Probab=96.25 E-value=0.009 Score=48.37 Aligned_cols=160 Identities=11% Similarity=0.057 Sum_probs=90.9
Q ss_pred hHHHHHHhhc--cccceEeeccCCcchH------------------------HHH-HHHHhhccccCCCcccccccCCcc
Q 026021 22 WGASLAHHFS--RTVDVVLRGYSGYNTR------------------------WAV-KVMERVLPAANGESESERERVSTI 74 (244)
Q Consensus 22 ~~~~l~~~~~--~~~~v~n~g~~G~~~~------------------------~~~-~~l~~~~~~~~~~~~~~~~~~~pd 74 (244)
+...|.+.++ ..+-+++.+.+|.... .+. ..+.+....... .......
T Consensus 110 FAr~L~~~Lp~nVPVGLIp~A~GGSsIE~W~~~~~~~~~g~~~~~~~W~~g~~LYn~MI~p~k~Al~~-----~~g~~Ik 184 (337)
T 3pt5_A 110 IARKLLPFIPDNAGILIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRTRAALVK-----NPQNKFL 184 (337)
T ss_dssp HHHHHGGGSCTTEEEEEEEEECTTCBSSSSCCCCEETTTEECTTCCBCSTTSHHHHHHHHHHHHHHHT-----CTTCEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCcCCCcccccCccccccccccccccccccCCChHHHHHHHHHHHHHhh-----cCCCceE
Confidence 6778888885 3588999999996553 111 122221110000 0013567
Q ss_pred EEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC----------CCceEEEEcCCCCChhhhhcCCCCCCC
Q 026021 75 AVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW----------PNTLVLLITPPPIDEEARLKHPYVENP 144 (244)
Q Consensus 75 ~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~----------p~~~vil~~~~~~~~~~~~~~~~~~~~ 144 (244)
-|+..=|..|.... ..+.|.+.+..||+..|+.. ++.+++++..+.+.....
T Consensus 185 GVLWyQGESN~~~~---------~~~~Y~~~f~~LI~~wR~d~~~~~~q~~~~~~lPFi~gqL~~f~~~~~--------- 246 (337)
T 3pt5_A 185 GVCWMQGEFDLMTS---------DYASHPQHFNHMVEAFRRDLKQYHSQLNNITDAPWFCGDTTWYWKENF--------- 246 (337)
T ss_dssp EEEEECCTGGGGST---------TGGGHHHHHHHHHHHHHHHHGGGGGGCC---CCCEEEECCCHHHHHHC---------
T ss_pred EEEEecCCccccCc---------CHHHHHHHHHHHHHHHHHHHcccccccccCCCCCEEEEECchhhhccC---------
Confidence 78888998888421 24679999999999999864 467788887754311110
Q ss_pred CCCCccchHHHHHHHHHHHHHH--HhcCCCeeechhHhhh------------------------hhhcccccccccccCC
Q 026021 145 TGLPERTNEAAGAYAKACIEVA--GECGLPVVDLWTKMQQ------------------------LADWKTAYLSDGLHLN 198 (244)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~a--~~~~v~~iD~~~~~~~------------------------~~~~~~~~~~DgiHpn 198 (244)
-.+|....-..+ .+.++.|+.+...... ..+| .-..|++|++
T Consensus 247 ----------~~~y~~~~g~~~~~~~~~~~~~~~n~~~~~~p~~~p~~~~~~~~~~~~~a~~vss~~~--t~~~d~~HF~ 314 (337)
T 3pt5_A 247 ----------PHAYEAIYGNYQNNILANIIFVDFQQQGARGLTNAPDEDPDDLSTGYYGSAYRSPENW--TTALRSSHFS 314 (337)
T ss_dssp ----------HHHHHHHTGGGTSCSSTTEEEECCSCTTCCCSBSSGGGSCCBGGGTBCCGGGCCTTTC--SCSCGGGSBC
T ss_pred ----------ccchhhhcccccccccccceeeehhHHHHhCcccCCCcCcccccccccceEEEcCCCC--ccCCCCcccC
Confidence 112222222222 1123334443222111 1111 2458999999
Q ss_pred hhHHH-HHHHHHHHHHhhc
Q 026021 199 ETGNR-VVFEEVVMKLKTE 216 (244)
Q Consensus 199 ~~G~~-~~a~~l~~~l~~~ 216 (244)
..+++ ++++.++.++.+.
T Consensus 315 a~a~R~~~g~Rya~a~l~l 333 (337)
T 3pt5_A 315 SAARRGIISDRFVEAILQF 333 (337)
T ss_dssp HHHHHTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 99999 8888888877653
No 31
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=94.70 E-value=0.074 Score=44.43 Aligned_cols=186 Identities=10% Similarity=0.095 Sum_probs=100.7
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhcc---ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEe
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSR---TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFF 80 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~---~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~ 80 (244)
||.++|+|.+ ......|...+.+ ..+++...++.+ .+..+.. .+.....+||+|++.+
T Consensus 24 riavlg~~T~------~~l~~~l~~~~~~~g~~~~~~~~~y~~~--------~~~ll~~-----~s~l~~~~pd~v~~~~ 84 (387)
T 3nvb_A 24 KVALLGDTAT------QLLATAIKGEGILRNYNIELWEAEYNQV--------ERQIMDP-----TSDYYQFEPDYTIIFH 84 (387)
T ss_dssp EEEEEESSCC------HHHHHHHHHHHHHTTCEEEEEECCTTCH--------HHHHHCT-----TSHHHHHCCSEEEEEC
T ss_pred EEEEeccchH------HHHHHHHHHHHHHCCCcceEEEcCcchH--------HHHHhCC-----cchhhhcCCCEEEEEe
Confidence 8999999999 3344454443321 133444444431 1222111 0000137899999988
Q ss_pred ccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHH
Q 026021 81 GANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAK 160 (244)
Q Consensus 81 G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (244)
-.-++ .+... .......+...+.+..+.+.++++ ..+.|++.+.+.......... ...........+.++|.
T Consensus 85 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vv~~~~~~p~~~~~g~~-----~~~~~~~~~~~~~~~N~ 156 (387)
T 3nvb_A 85 STHKL-LEKHS-LVNSDLQNKLADDRLDFVRLLCEQ-GIGRVIYYNYPEIEDTIWGSY-----ATKVQSSFTYQLTKLNY 156 (387)
T ss_dssp CHHHH-HHHHH-TSCHHHHTTHHHHHHHHHHHHHHH-CCSEEEEECCCCCCCCSSGGG-----GGGCTTSHHHHHHHHHH
T ss_pred cHHHh-ccccc-CChHHHHHHHHHHHHHHHHHHHhc-cCceEEEeCCCCCCccccccc-----hhcccccHHHHHHHHHH
Confidence 76555 21100 000001123445566666666766 467788887653321110000 00111233457889999
Q ss_pred HHHHHHHhc-CCCeeechhHhhhhhh--cc--cccccccccCChhHHHHHHHHHHHHHhhc
Q 026021 161 ACIEVAGEC-GLPVVDLWTKMQQLAD--WK--TAYLSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 161 ~~~~~a~~~-~v~~iD~~~~~~~~~~--~~--~~~~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
.+.+.++++ ++.++|+.......+. |. ..+..-+.++|...-..+|..+...++..
T Consensus 157 ~l~~~~~~~~~~~~~D~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~l 217 (387)
T 3nvb_A 157 ELMNISQAYPNFFICNLAGISAKYGRNFMFDSSVYVNTEIILSLDALPIISSRTIDIIAAI 217 (387)
T ss_dssp HHHHHHHHCTTEEEECHHHHHHHHCHHHHCCHHHHHHHCCCSCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCEEEeeHHHHHHHhCcccccCchHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999985 7889999877655332 11 12223356678888888888887766554
No 32
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.94 E-value=3.1 Score=28.33 Aligned_cols=83 Identities=16% Similarity=0.209 Sum_probs=46.3
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEE
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVF 79 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~ 79 (244)
|+++|+++.|+-. ....+...+.. .+.+. ...+ .......+ . ..+||+|++-
T Consensus 3 m~~~ILivdd~~~--------~~~~l~~~L~~~g~~v~-~~~~---~~~a~~~l----~-----------~~~~dlvllD 55 (137)
T 3cfy_A 3 LRPRVLLVEDSTS--------LAILYKQYVKDEPYDIF-HVET---GRDAIQFI----E-----------RSKPQLIILD 55 (137)
T ss_dssp CCCEEEEECSCTT--------HHHHHHHHTTTSSSEEE-EESS---HHHHHHHH----H-----------HHCCSEEEEC
T ss_pred ccceEEEEeCCHH--------HHHHHHHHHHhcCceEE-EeCC---HHHHHHHH----H-----------hcCCCEEEEe
Confidence 5568999999877 34555555532 23332 1111 12222222 2 2678999886
Q ss_pred eccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 80 FGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 80 ~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
+..-|. +- .++++.+++..+.++|++++...
T Consensus 56 ~~l~~~------------~g-------~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 56 LKLPDM------------SG-------EDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp SBCSSS------------BH-------HHHHHHHHHTTCCCEEEEEESSC
T ss_pred cCCCCC------------CH-------HHHHHHHHhcCCCCCEEEEEecC
Confidence 543332 11 24566667767788888887743
No 33
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=88.92 E-value=3.2 Score=28.66 Aligned_cols=41 Identities=10% Similarity=-0.022 Sum_probs=28.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+...|.. -.++++.+++..|.++|++++....
T Consensus 65 ~~~dlii~D~~l~~~~-------------------g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 65 ESVDIAILDVEMPVKT-------------------GLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp SCCSEEEECSSCSSSC-------------------HHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred cCCCEEEEeCCCCCCc-------------------HHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 7799999876543331 1346667777788899999987543
No 34
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=88.56 E-value=3.1 Score=28.78 Aligned_cols=81 Identities=16% Similarity=0.120 Sum_probs=46.6
Q ss_pred CeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCC-ccEEEEEec
Q 026021 3 PKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVS-TIAVAVFFG 81 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-pd~vii~~G 81 (244)
.+|+++.|.-. ....+...+...+.+.. ..+ .......+. . .. +|+|++-+.
T Consensus 5 ~~ILivdd~~~--------~~~~l~~~L~~~~~v~~-~~~---~~~a~~~l~---~------------~~~~dlvi~D~~ 57 (151)
T 3kcn_A 5 ERILLVDDDYS--------LLNTLKRNLSFDFEVTT-CES---GPEALACIK---K------------SDPFSVIMVDMR 57 (151)
T ss_dssp CEEEEECSCHH--------HHHHHHHHHTTTSEEEE-ESS---HHHHHHHHH---H------------SCCCSEEEEESC
T ss_pred CeEEEEeCCHH--------HHHHHHHHhccCceEEE-eCC---HHHHHHHHH---c------------CCCCCEEEEeCC
Confidence 48999999876 33455555543344432 111 222222222 2 44 599999876
Q ss_pred cCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 82 ANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 82 ~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..+.. . -++++.+++..|.++|++++...
T Consensus 58 l~~~~------------g-------~~~~~~l~~~~~~~~ii~~s~~~ 86 (151)
T 3kcn_A 58 MPGME------------G-------TEVIQKARLISPNSVYLMLTGNQ 86 (151)
T ss_dssp CSSSC------------H-------HHHHHHHHHHCSSCEEEEEECGG
T ss_pred CCCCc------------H-------HHHHHHHHhcCCCcEEEEEECCC
Confidence 54431 1 24566677777888899888743
No 35
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=87.57 E-value=2.9 Score=27.40 Aligned_cols=84 Identities=13% Similarity=0.113 Sum_probs=45.6
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEE
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVF 79 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~ 79 (244)
|..+|+++.|+-. ....+...+.. ++.++....++ ......+ . ..+||+|++-
T Consensus 1 m~~~ilivdd~~~--------~~~~l~~~l~~~g~~vv~~~~~~---~~a~~~~----~-----------~~~~dlil~D 54 (120)
T 1tmy_A 1 MGKRVLIVDDAAF--------MRMMLKDIITKAGYEVAGEATNG---REAVEKY----K-----------ELKPDIVTMD 54 (120)
T ss_dssp -CCEEEEECSCHH--------HHHHHHHHHHHTTCEEEEEESSH---HHHHHHH----H-----------HHCCSEEEEE
T ss_pred CCceEEEEcCcHH--------HHHHHHHHHhhcCcEEEEEECCH---HHHHHHH----H-----------hcCCCEEEEe
Confidence 6668999999877 23344444421 23333222222 1222222 2 2578999887
Q ss_pred eccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 80 FGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 80 ~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
+..-+. +- .++++.+++..|.+++++++...
T Consensus 55 ~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 55 ITMPEM------------NG-------IDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CSCGGG------------CH-------HHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCCCC------------cH-------HHHHHHHHhhCCCCeEEEEeCCC
Confidence 643322 11 24566667767788899888743
No 36
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=86.81 E-value=4.7 Score=26.58 Aligned_cols=40 Identities=15% Similarity=-0.059 Sum_probs=26.1
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+. +. -++++.+++..|.++|++++...
T Consensus 46 ~~~dlvl~D~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 46 ERPDLVLLDMKIPGM------------DG-------IEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HCCSEEEEESCCTTC------------CH-------HHHHHHHHHHCTTCEEEEEESSC
T ss_pred cCCCEEEEecCCCCC------------CH-------HHHHHHHHHhCCCCCEEEEEccC
Confidence 578999987644332 11 24556666667888899988743
No 37
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=85.10 E-value=2.5 Score=29.62 Aligned_cols=38 Identities=13% Similarity=-0.003 Sum_probs=26.9
Q ss_pred CccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 72 STIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 72 ~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
.||+|++-+...|.. -.++++.+++..|.++|++++..
T Consensus 83 ~~dliilD~~l~~~~-------------------g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 83 NIDIVTLXITMPKMD-------------------GITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp GCCEEEECSSCSSSC-------------------HHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCEEEEeccCCCcc-------------------HHHHHHHHHhhCCCCcEEEEecc
Confidence 789999876544431 13566777777788899999874
No 38
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=85.02 E-value=2.6 Score=29.45 Aligned_cols=20 Identities=5% Similarity=-0.154 Sum_probs=15.6
Q ss_pred HHHHHHHHhcCCCeeechhH
Q 026021 160 KACIEVAGECGLPVVDLWTK 179 (244)
Q Consensus 160 ~~~~~~a~~~~v~~iD~~~~ 179 (244)
+.+.+.|+++|+.+++-...
T Consensus 106 ~~l~~~a~~~Gi~~igpnc~ 125 (138)
T 1y81_A 106 EEIRRFLEKAGVEYSFGRCI 125 (138)
T ss_dssp HHHHHHHHHHTCEEECSCCH
T ss_pred HHHHHHHHHCCCEEEcCCcc
Confidence 67778888999999985443
No 39
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=84.70 E-value=5.8 Score=25.70 Aligned_cols=39 Identities=8% Similarity=0.007 Sum_probs=25.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
.+||+|++-+...+. +. .++++.+++..|.+++++++..
T Consensus 44 ~~~dlvl~D~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGI------------SG-------LEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSS------------CH-------HHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCC------------CH-------HHHHHHHHccCCCCeEEEEECC
Confidence 679999886643332 11 2456666766678889888764
No 40
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=84.65 E-value=7.4 Score=26.46 Aligned_cols=40 Identities=8% Similarity=0.031 Sum_probs=26.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. +- .++++.+++..|.++|++++...
T Consensus 48 ~~~dlvllD~~lp~~------------~g-------~~l~~~l~~~~~~~~ii~ls~~~ 87 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRM------------DG-------IELVDNILKLYPDCSVIFMSGYS 87 (141)
T ss_dssp SCCSEEEEESCCSSS------------CH-------HHHHHHHHHHCTTCEEEEECCST
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHHhhCCCCcEEEEeCCC
Confidence 679999987654332 11 24566666667888899988754
No 41
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=84.58 E-value=7.3 Score=26.33 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=26.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..||+|++-+ ..+. .-.++++.+++..|.++|++++..
T Consensus 47 ~~~dlvi~d~-~~~~-------------------~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGE-------------------ESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp SCCSEEEEEC-TTTH-------------------HHHHHHHHHHHHCTTCEEEEEESC
T ss_pred cCCCEEEEeC-CCCC-------------------cHHHHHHHHHHHCCCCCEEEEECC
Confidence 6799999876 3221 123567777777788889998874
No 42
>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis}
Probab=84.48 E-value=12 Score=32.30 Aligned_cols=114 Identities=11% Similarity=0.100 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCC--CCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhh
Q 026021 106 LHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYV--ENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQL 183 (244)
Q Consensus 106 l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~ 183 (244)
...+++++++++|+ +|+...=.|-..........+ .....+.....+..+.|-....+..+++|+++--+ .+.++.
T Consensus 110 ~~~~lk~A~~~~~~-~i~aspWSpP~wMk~ng~~~~~~g~~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~i-s~qNEP 187 (507)
T 3clw_A 110 QQWFMKAARERGMN-NFLFFTNSAPYFMTRSASTVSTDQDCINLQNDKFDDFARFLVKSAQHFREQGFHVNYI-SPNNEP 187 (507)
T ss_dssp HHHHHHHHHHTTCC-CEEEECSSCCGGGSSSSSSSCCCSSSCSSCTTCHHHHHHHHHHHHHHHHHTTCCEEEE-ECCSCT
T ss_pred HHHHHHHHHHcCCC-eEEEeCCCCcHHhccCCCccCCCCccccCChHHHHHHHHHHHHHHHHHHHcCCceeEe-eeecCC
Confidence 56788999998887 565542111111111111111 10011223344444555555555555778875333 222222
Q ss_pred h-hcccccccccccCChhHHHHHHHHHHHHHhhcCCCCC
Q 026021 184 A-DWKTAYLSDGLHLNETGNRVVFEEVVMKLKTEGLSLE 221 (244)
Q Consensus 184 ~-~~~~~~~~DgiHpn~~G~~~~a~~l~~~l~~~~~~~~ 221 (244)
. .+...-...+.|++++-++.+.+.|.+.|++.++..+
T Consensus 188 ~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~~~g~~~k 226 (507)
T 3clw_A 188 NGQWHANSFQEGSFATKADLYRMVEELDKAISEAQIDTK 226 (507)
T ss_dssp TSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHHHHTCSCE
T ss_pred ccccccCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCce
Confidence 1 2211124668999999999989999999999876443
No 43
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=83.88 E-value=5 Score=27.00 Aligned_cols=41 Identities=7% Similarity=-0.045 Sum_probs=28.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+...|.. -.++++.+++..|.++|++++...-
T Consensus 50 ~~~dlvi~d~~l~~~~-------------------g~~~~~~l~~~~~~~~ii~~s~~~~ 90 (137)
T 3hdg_A 50 HAPDVIITDIRMPKLG-------------------GLEMLDRIKAGGAKPYVIVISAFSE 90 (137)
T ss_dssp HCCSEEEECSSCSSSC-------------------HHHHHHHHHHTTCCCEEEECCCCCC
T ss_pred cCCCEEEEeCCCCCCC-------------------HHHHHHHHHhcCCCCcEEEEecCcC
Confidence 6799999876544431 1256677777778888888887543
No 44
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=83.73 E-value=8 Score=26.14 Aligned_cols=40 Identities=18% Similarity=0.056 Sum_probs=27.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...|.. . -++++.+++..|.++|++++...
T Consensus 48 ~~~dlvi~d~~l~~~~------------g-------~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 48 NSIDVVITDMKMPKLS------------G-------MDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTCCEEEEESCCSSSC------------H-------HHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCEEEEeCCCCCCc------------H-------HHHHHHHHHhCCCCeEEEEECCC
Confidence 6899999987544431 1 24666677777889999998744
No 45
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=83.66 E-value=7.6 Score=25.82 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=25.9
Q ss_pred ccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 73 TIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 73 pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
||+|++-+...+. .--++++.+++..|.++|++++.
T Consensus 47 ~dlvi~D~~l~~~-------------------~g~~~~~~l~~~~~~~~ii~~s~ 82 (135)
T 3eqz_A 47 QDIIILDLMMPDM-------------------DGIEVIRHLAEHKSPASLILISG 82 (135)
T ss_dssp TEEEEEECCTTTT-------------------HHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCEEEEeCCCCCC-------------------CHHHHHHHHHhCCCCCCEEEEEe
Confidence 9999997654433 11346777777888889999887
No 46
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=83.44 E-value=7.6 Score=25.96 Aligned_cols=40 Identities=8% Similarity=-0.066 Sum_probs=26.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+. +. -++++.+++..+.++|++++...
T Consensus 46 ~~~dlvl~D~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~ 85 (136)
T 1mvo_A 46 EKPDLIVLDVMLPKL------------DG-------IEVCKQLRQQKLMFPILMLTAKD 85 (136)
T ss_dssp HCCSEEEEESSCSSS------------CH-------HHHHHHHHHTTCCCCEEEEECTT
T ss_pred cCCCEEEEecCCCCC------------CH-------HHHHHHHHcCCCCCCEEEEECCC
Confidence 678999887654332 11 24566777766778888887643
No 47
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=82.20 E-value=6.6 Score=26.10 Aligned_cols=83 Identities=12% Similarity=0.108 Sum_probs=43.3
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhcc--ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEE
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFSR--TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAV 78 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~~--~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii 78 (244)
|+.+|+++.|+-. ....+...+.. .+.++....++ ......+ . ...||+|++
T Consensus 1 m~~~ilivdd~~~--------~~~~l~~~l~~~~~~~~~~~~~~~---~~a~~~~----~-----------~~~~dlvll 54 (130)
T 1dz3_A 1 MSIKVCIADDNRE--------LVSLLDEYISSQPDMEVIGTAYNG---QDCLQML----E-----------EKRPDILLL 54 (130)
T ss_dssp -CEEEEEECSCHH--------HHHHHHHHHHTSTTEEEEEEESSH---HHHHHHH----H-----------HHCCSEEEE
T ss_pred CceEEEEEcCCHH--------HHHHHHHHHHhCCCceEEEEeCCH---HHHHHHH----h-----------cCCCCEEEE
Confidence 6668999999877 33445554432 13332222222 1122222 2 257899998
Q ss_pred EeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh-CCCceEEEEcCC
Q 026021 79 FFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR-WPNTLVLLITPP 128 (244)
Q Consensus 79 ~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~-~p~~~vil~~~~ 128 (244)
-+..-+. +- -++++.+++. .+.++|++++..
T Consensus 55 D~~l~~~------------~g-------~~~~~~l~~~~~~~~~ii~ls~~ 86 (130)
T 1dz3_A 55 DIIMPHL------------DG-------LAVLERIRAGFEHQPNVIMLTAF 86 (130)
T ss_dssp ESCCSSS------------CH-------HHHHHHHHHHCSSCCEEEEEEET
T ss_pred ecCCCCC------------CH-------HHHHHHHHhcCCCCCcEEEEecC
Confidence 7654332 11 1345555554 466778877763
No 48
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=82.12 E-value=8.6 Score=26.45 Aligned_cols=40 Identities=8% Similarity=-0.053 Sum_probs=26.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+. + -.++++.+++..|.++|++++...
T Consensus 50 ~~~dlii~D~~l~~~------------~-------g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGP------------G-------GIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp TCCSEEEECSCCSSS------------C-------HHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCCEEEEecCCCCC------------C-------HHHHHHHHHHhCCCCeEEEEECCC
Confidence 679999887643332 1 124667777777888899888643
No 49
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=81.69 E-value=9.2 Score=25.38 Aligned_cols=82 Identities=10% Similarity=0.098 Sum_probs=45.1
Q ss_pred CCeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEec
Q 026021 2 RPKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFG 81 (244)
Q Consensus 2 ~~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G 81 (244)
+.+|+++.|+-. ....+...+...+.+.. .. +... .+.. +. ..+||+|++-+.
T Consensus 4 ~~~ilivdd~~~--------~~~~l~~~l~~~~~v~~-~~---~~~~---a~~~-l~-----------~~~~dlvi~d~~ 56 (133)
T 3nhm_A 4 KPKVLIVENSWT--------MRETLRLLLSGEFDCTT-AA---DGAS---GLQQ-AL-----------AHPPDVLISDVN 56 (133)
T ss_dssp -CEEEEECSCHH--------HHHHHHHHHTTTSEEEE-ES---SHHH---HHHH-HH-----------HSCCSEEEECSS
T ss_pred CCEEEEEcCCHH--------HHHHHHHHHhCCcEEEE-EC---CHHH---HHHH-Hh-----------cCCCCEEEEeCC
Confidence 458999999877 33445555543333332 11 1122 2222 22 267999988764
Q ss_pred cCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCCC
Q 026021 82 ANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPPP 129 (244)
Q Consensus 82 ~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~~ 129 (244)
..+. + -.++++.+++. .+.++|++++...
T Consensus 57 l~~~------------~-------g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 57 MDGM------------D-------GYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp CSSS------------C-------HHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred CCCC------------C-------HHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 3332 1 13456666665 4678899988754
No 50
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=81.41 E-value=6 Score=26.41 Aligned_cols=41 Identities=7% Similarity=0.078 Sum_probs=28.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+...+.. --++++.+++..|.++|++++...-
T Consensus 45 ~~~dlii~d~~l~~~~-------------------g~~~~~~l~~~~~~~~ii~~s~~~~ 85 (134)
T 3f6c_A 45 LKPDIVIIDVDIPGVN-------------------GIQVLETLRKRQYSGIIIIVSAKND 85 (134)
T ss_dssp HCCSEEEEETTCSSSC-------------------HHHHHHHHHHTTCCSEEEEEECC--
T ss_pred cCCCEEEEecCCCCCC-------------------hHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 6799999987544431 1356677777888899999887543
No 51
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=81.06 E-value=9.5 Score=25.11 Aligned_cols=83 Identities=14% Similarity=0.281 Sum_probs=44.3
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEE
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVF 79 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~ 79 (244)
|..+|+++.|+-. ....+...+.. .+.+. ...+| .+.++.. . ..+||+|++-
T Consensus 1 m~~~ILivdd~~~--------~~~~l~~~l~~~g~~v~-~~~~~------~~al~~l-~-----------~~~~dlvllD 53 (122)
T 3gl9_A 1 MSKKVLLVDDSAV--------LRKIVSFNLKKEGYEVI-EAENG------QIALEKL-S-----------EFTPDLIVLX 53 (122)
T ss_dssp -CCEEEEECSCHH--------HHHHHHHHHHHTTCEEE-EESSH------HHHHHHH-T-----------TBCCSEEEEC
T ss_pred CCceEEEEeCCHH--------HHHHHHHHHHHCCcEEE-EeCCH------HHHHHHH-H-----------hcCCCEEEEe
Confidence 6679999999877 22334433321 24443 22222 2222322 2 3789999886
Q ss_pred eccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCCC
Q 026021 80 FGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPPP 129 (244)
Q Consensus 80 ~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~~ 129 (244)
+..-+. +- -++++.+++. .+.++|++++...
T Consensus 54 ~~~p~~------------~g-------~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 54 IMMPVM------------DG-------FTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp SCCSSS------------CH-------HHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred ccCCCC------------cH-------HHHHHHHHhcccccCCCEEEEecCC
Confidence 543332 11 2455666654 4677888888743
No 52
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=80.38 E-value=8.9 Score=25.83 Aligned_cols=81 Identities=12% Similarity=0.051 Sum_probs=44.4
Q ss_pred CeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 3 PKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
.+|+++.|+-. ....+.+.+...+.+. ...+ .......+ . ...||+|++-+..
T Consensus 4 ~~iLivdd~~~--------~~~~l~~~l~~~~~v~-~~~~---~~~a~~~~----~-----------~~~~dlvi~D~~l 56 (140)
T 3n53_A 4 KKILIIDQQDF--------SRIELKNFLDSEYLVI-ESKN---EKEALEQI----D-----------HHHPDLVILDMDI 56 (140)
T ss_dssp CEEEEECSCHH--------HHHHHHHHHTTTSEEE-EESS---HHHHHHHH----H-----------HHCCSEEEEETTC
T ss_pred CEEEEEeCCHH--------HHHHHHHHHHhcceEE-EeCC---HHHHHHHH----h-----------cCCCCEEEEeCCC
Confidence 38999999877 3345555554332222 1111 22222222 2 2678999998654
Q ss_pred CCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCC
Q 026021 83 NDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPP 129 (244)
Q Consensus 83 ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~ 129 (244)
.+.. --++++.+++.. +.++|++++...
T Consensus 57 ~~~~-------------------g~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (140)
T 3n53_A 57 IGEN-------------------SPNLCLKLKRSKGLKNVPLILLFSSE 86 (140)
T ss_dssp -------------------------CHHHHHHTSTTCTTCCEEEEECC-
T ss_pred CCCc-------------------HHHHHHHHHcCcccCCCCEEEEecCC
Confidence 4331 124566777765 788899988754
No 53
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=80.00 E-value=11 Score=25.82 Aligned_cols=41 Identities=12% Similarity=-0.052 Sum_probs=28.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+...+.. -.++++.+++..|.++|++++...-
T Consensus 60 ~~~dlii~d~~l~~~~-------------------g~~~~~~l~~~~~~~~ii~~s~~~~ 100 (152)
T 3eul_A 60 HLPDVALLDYRMPGMD-------------------GAQVAAAVRSYELPTRVLLISAHDE 100 (152)
T ss_dssp HCCSEEEEETTCSSSC-------------------HHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred cCCCEEEEeCCCCCCC-------------------HHHHHHHHHhcCCCCeEEEEEccCC
Confidence 6799999987544331 1356777777788899999987543
No 54
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=79.98 E-value=12 Score=25.50 Aligned_cols=104 Identities=13% Similarity=0.171 Sum_probs=57.8
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhc-cccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFS-RTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~-~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
+|+++|-|-. +..+...+.+.+. ..+.++-..-.+..... ...+.. +.+. +. +|+++|...
T Consensus 6 siAVVGaS~~-----~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G-~~~y~s-l~dl---------p~-vDlavi~~p- 67 (122)
T 3ff4_A 6 KTLILGATPE-----TNRYAYLAAERLKSHGHEFIPVGRKKGEVLG-KTIINE-RPVI---------EG-VDTVTLYIN- 67 (122)
T ss_dssp CEEEETCCSC-----TTSHHHHHHHHHHHHTCCEEEESSSCSEETT-EECBCS-CCCC---------TT-CCEEEECSC-
T ss_pred EEEEEccCCC-----CCCHHHHHHHHHHHCCCeEEEECCCCCcCCC-eeccCC-hHHC---------CC-CCEEEEEeC-
Confidence 8999999987 2445444444442 12344433222222110 011111 1121 36 999999863
Q ss_pred CCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHH
Q 026021 83 NDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKAC 162 (244)
Q Consensus 83 ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (244)
.+....+++++.+.+.+ .+|+++-. .++.+
T Consensus 68 --------------------~~~v~~~v~e~~~~g~k--~v~~~~G~----------------------------~~~e~ 97 (122)
T 3ff4_A 68 --------------------PQNQLSEYNYILSLKPK--RVIFNPGT----------------------------ENEEL 97 (122)
T ss_dssp --------------------HHHHGGGHHHHHHHCCS--EEEECTTC----------------------------CCHHH
T ss_pred --------------------HHHHHHHHHHHHhcCCC--EEEECCCC----------------------------ChHHH
Confidence 35556667777777655 45665411 12678
Q ss_pred HHHHHhcCCCeee
Q 026021 163 IEVAGECGLPVVD 175 (244)
Q Consensus 163 ~~~a~~~~v~~iD 175 (244)
.+.|+++|+.++.
T Consensus 98 ~~~a~~~Girvv~ 110 (122)
T 3ff4_A 98 EEILSENGIEPVI 110 (122)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHHcCCeEEC
Confidence 8899999999885
No 55
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=79.88 E-value=5.8 Score=26.68 Aligned_cols=43 Identities=12% Similarity=-0.017 Sum_probs=25.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
..||+|++-+...+.... ..+. .++++.+++..|.++|++++.
T Consensus 46 ~~~dlvi~d~~~~~~~~~-------~~~g-------~~~~~~l~~~~~~~~ii~ls~ 88 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINN-------GNEG-------LFWLHEIKRQYRDLPVVLFTA 88 (140)
T ss_dssp SCEEEEEEETTTTC------------CCH-------HHHHHHHHHHCTTCCEEEEEE
T ss_pred CCCCEEEEeCCcCCCCCC-------CccH-------HHHHHHHHhhCcCCCEEEEEC
Confidence 679999998754310000 0011 245666666678888999886
No 56
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}
Probab=79.79 E-value=27 Score=29.56 Aligned_cols=142 Identities=9% Similarity=-0.015 Sum_probs=75.4
Q ss_pred cCCccEEEEEeccCCCCCCCCC--CC-----CcccChhHHHHHHHHHHHHHHhhCCCceEEEEc-CCCCChhhhhcCCCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRC--GA-----FQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLIT-PPPIDEEARLKHPYV 141 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~--~~-----~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~-~~~~~~~~~~~~~~~ 141 (244)
.....++=+.+|..|......+ +. ....+.+.=...+..+++++++.+|+.+|+... .||. .........+
T Consensus 80 Glglsi~R~~IG~~d~s~~~ysy~d~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~aspWSpP~-wMk~n~~~~~ 158 (447)
T 2wnw_A 80 EHNYTLARMPIQSCDFSLGNYAYVDSSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASPWSPPA-FMKTNNDMNG 158 (447)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEESCCCG-GGBTTSCSBS
T ss_pred CCceEEEEEeecCCCCCCCcccccCCCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEecCCCcH-HhccCCCcCC
Confidence 3677888899999987542211 00 011222222345678899999988887776553 2221 1221111110
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccccccccCChhHHHHHHH-HHHHHHhhcCC
Q 026021 142 ENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSDGLHLNETGNRVVFE-EVVMKLKTEGL 218 (244)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~-~l~~~l~~~~~ 218 (244)
. . .+.....+..+.|-....+..+++|+++ +.-.+.++. .+ .....+.|.+++-.+.+.+ .|.+.|++.++
T Consensus 159 g-g-~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i-~~is~qNEP-~~--~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl 230 (447)
T 2wnw_A 159 G-G-KLRRECYADWADIIINYLLEYRRHGINV-QALSVQNEP-VA--VKTWDSCLYSVEEETAFAVQYLRPRLARQGM 230 (447)
T ss_dssp C-C-BBCGGGHHHHHHHHHHHHHHHHHTTCCC-CEEESCSST-TC--CCSSBCCBCCHHHHHHHHHHTHHHHHHHTTC
T ss_pred C-C-cCCHHHHHHHHHHHHHHHHHHHHcCCCe-eEEeeeccC-CC--CCCCCcCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 0 1 1111222333334333344445578773 322333322 22 1346789999998887766 88899988765
No 57
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=78.60 E-value=7.5 Score=26.15 Aligned_cols=40 Identities=10% Similarity=0.058 Sum_probs=28.6
Q ss_pred CCccEEEEEeccCC--CCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGAND--ACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND--~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
.+||+|++-+...| . .--++++.+++..|.++|++++...
T Consensus 49 ~~~dlvi~D~~l~~~~~-------------------~g~~~~~~l~~~~~~~~ii~~s~~~ 90 (136)
T 3kto_A 49 DDAIGMIIEAHLEDKKD-------------------SGIELLETLVKRGFHLPTIVMASSS 90 (136)
T ss_dssp TTEEEEEEETTGGGBTT-------------------HHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred cCCCEEEEeCcCCCCCc-------------------cHHHHHHHHHhCCCCCCEEEEEcCC
Confidence 77999998765433 2 1235677788878889999998754
No 58
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=78.55 E-value=12 Score=24.73 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=26.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
.+||+|++-+...+.. --++++.+++..|.++|++++...
T Consensus 50 ~~~dlvi~d~~l~~~~-------------------g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 50 FTPDLMICDIAMPRMN-------------------GLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp CCCSEEEECCC------------------------CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred CCCCEEEEecCCCCCC-------------------HHHHHHHHHhcCCCCCEEEEEcCC
Confidence 7799999876433321 135666777777888999998754
No 59
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=78.16 E-value=10 Score=25.57 Aligned_cols=40 Identities=20% Similarity=0.178 Sum_probs=26.6
Q ss_pred CCccEEEEEeccC-CCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGAN-DACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~N-D~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~~ 129 (244)
..||+|++-+... +. .--++++.+++ ..+.++|++++...
T Consensus 49 ~~~dlvi~D~~l~~~~-------------------~g~~~~~~l~~~~~~~~~~ii~ls~~~ 91 (140)
T 3lua_A 49 DSITLIIMDIAFPVEK-------------------EGLEVLSAIRNNSRTANTPVIIATKSD 91 (140)
T ss_dssp CCCSEEEECSCSSSHH-------------------HHHHHHHHHHHSGGGTTCCEEEEESCC
T ss_pred CCCcEEEEeCCCCCCC-------------------cHHHHHHHHHhCcccCCCCEEEEeCCC
Confidence 6899998865322 11 12356677777 67888899998743
No 60
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=78.09 E-value=11 Score=25.87 Aligned_cols=41 Identities=20% Similarity=-0.006 Sum_probs=22.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+...+.. -.++++.+++..|.++|++++...-
T Consensus 49 ~~~dlvi~d~~l~~~~-------------------g~~~~~~l~~~~~~~~ii~ls~~~~ 89 (154)
T 2qsj_A 49 NTVDLILLDVNLPDAE-------------------AIDGLVRLKRFDPSNAVALISGETD 89 (154)
T ss_dssp CCCSEEEECC-------------------------CHHHHHHHHHHCTTSEEEEC-----
T ss_pred CCCCEEEEeCCCCCCc-------------------hHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 6799998876433321 1245667777778888999887543
No 61
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=77.25 E-value=15 Score=25.18 Aligned_cols=40 Identities=10% Similarity=0.051 Sum_probs=27.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+.. . .++++.+++..|.++|++++...
T Consensus 50 ~~~dlvi~d~~l~~~~------------g-------~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMG------------G-------EVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp SCCSEEEEESSCSSSC------------H-------HHHHHHHHHHCTTSEEEEEECGG
T ss_pred CCCCEEEEecCCCCCC------------H-------HHHHHHHHHhCCCCcEEEEecCC
Confidence 6799999987544431 1 24566777777888899988743
No 62
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=76.69 E-value=15 Score=24.87 Aligned_cols=40 Identities=18% Similarity=0.056 Sum_probs=27.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...|. .--++++.+++..|.++|++++...
T Consensus 66 ~~~dlvi~D~~l~~~-------------------~g~~~~~~l~~~~~~~~ii~lt~~~ 105 (146)
T 4dad_A 66 DAFDILMIDGAALDT-------------------AELAAIEKLSRLHPGLTCLLVTTDA 105 (146)
T ss_dssp TTCSEEEEECTTCCH-------------------HHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred CCCCEEEEeCCCCCc-------------------cHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 679999987643221 1235667777778889999998754
No 63
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=76.50 E-value=13 Score=24.31 Aligned_cols=40 Identities=13% Similarity=-0.011 Sum_probs=27.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~~ 129 (244)
..||+|++-+...+.. --++++.+++. .+.++|++++...
T Consensus 46 ~~~dlii~D~~l~~~~-------------------g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTS-------------------GLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp SCCSEEEEESBCSSSB-------------------HHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred cCCCEEEEeCCCCCCC-------------------HHHHHHHHHhhhccCCCCEEEEECCc
Confidence 6799999987544331 13566777776 6888899988753
No 64
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=76.49 E-value=12 Score=25.00 Aligned_cols=41 Identities=10% Similarity=0.052 Sum_probs=26.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
.+||+|++-+...+. +- -++++.+++..|.++|++++...-
T Consensus 48 ~~~dlvilD~~lp~~------------~g-------~~~~~~l~~~~~~~~ii~ls~~~~ 88 (133)
T 3b2n_A 48 YNPNVVILDIEMPGM------------TG-------LEVLAEIRKKHLNIKVIIVTTFKR 88 (133)
T ss_dssp HCCSEEEECSSCSSS------------CH-------HHHHHHHHHTTCSCEEEEEESCCC
T ss_pred cCCCEEEEecCCCCC------------CH-------HHHHHHHHHHCCCCcEEEEecCCC
Confidence 578999886543332 11 245666677778888999887543
No 65
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=76.24 E-value=13 Score=24.18 Aligned_cols=13 Identities=31% Similarity=0.399 Sum_probs=11.2
Q ss_pred CCCeEEEEccccc
Q 026021 1 MRPKIYLFGDSIT 13 (244)
Q Consensus 1 ~~~~il~iGDSit 13 (244)
|..+|+++.|+-.
T Consensus 1 m~~~ilivdd~~~ 13 (120)
T 3f6p_A 1 MDKKILVVDDEKP 13 (120)
T ss_dssp CCCEEEEECSCHH
T ss_pred CCCeEEEEECCHH
Confidence 7779999999877
No 66
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=76.23 E-value=14 Score=24.91 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=27.4
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~~~ 130 (244)
..||+|++-+...+. .-.++++.+++ ..+.++|++++...-
T Consensus 50 ~~~dlii~D~~l~~~-------------------~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (144)
T 3kht_A 50 AKYDLIILDIGLPIA-------------------NGFEVMSAVRKPGANQHTPIVILTDNVS 92 (144)
T ss_dssp CCCSEEEECTTCGGG-------------------CHHHHHHHHHSSSTTTTCCEEEEETTCC
T ss_pred CCCCEEEEeCCCCCC-------------------CHHHHHHHHHhcccccCCCEEEEeCCCC
Confidence 779999886543332 11356677777 567888999987543
No 67
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=74.44 E-value=22 Score=25.79 Aligned_cols=41 Identities=7% Similarity=-0.106 Sum_probs=27.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|. +. -++++.+++..|.++|++++...-
T Consensus 47 ~~~dlvl~D~~lp~~------------~g-------~~~~~~l~~~~~~~~ii~ls~~~~ 87 (208)
T 1yio_A 47 EQHGCLVLDMRMPGM------------SG-------IELQEQLTAISDGIPIVFITAHGD 87 (208)
T ss_dssp TSCEEEEEESCCSSS------------CH-------HHHHHHHHHTTCCCCEEEEESCTT
T ss_pred cCCCEEEEeCCCCCC------------CH-------HHHHHHHHhcCCCCCEEEEeCCCC
Confidence 679999887644332 11 246677777778888999987543
No 68
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=74.40 E-value=14 Score=24.79 Aligned_cols=40 Identities=5% Similarity=-0.126 Sum_probs=27.1
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+.. -.++++.+++ ..+.++|++++...
T Consensus 50 ~~~dlii~d~~l~~~~-------------------g~~~~~~l~~~~~~~~~pii~~s~~~ 91 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMD-------------------GWDTIRAILDNSLEQGIAIVMLTAKN 91 (142)
T ss_dssp CCCEEEEEESCCSSSC-------------------HHHHHHHHHHTTCCTTEEEEEEECTT
T ss_pred cCCCEEEEeCCCCCCC-------------------HHHHHHHHHhhcccCCCCEEEEECCC
Confidence 6799999976543321 1246677777 56788899988753
No 69
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=73.27 E-value=7 Score=28.93 Aligned_cols=67 Identities=7% Similarity=-0.082 Sum_probs=43.4
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhcc----ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEE
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSR----TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVF 79 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~----~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~ 79 (244)
-|+.+||.+. .|...+.=...|.+.+.. .+.+...++-+.....+...+.+... ....|+||+.
T Consensus 18 ~IistGdEl~-~g~~~D~n~~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a~~-----------~~~~DlVItt 85 (189)
T 1jlj_A 18 GVLTVSDSCF-RNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCD-----------EKELNLILTT 85 (189)
T ss_dssp EEEEECHHHH-TTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHH-----------TSCCSEEEEE
T ss_pred EEEEECCccC-CCcccchHHHHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHHhh-----------cCCCCEEEEc
Confidence 5899999998 554433333344444432 36677778888777766666666554 2478999888
Q ss_pred ecc
Q 026021 80 FGA 82 (244)
Q Consensus 80 ~G~ 82 (244)
-|+
T Consensus 86 GGt 88 (189)
T 1jlj_A 86 GGT 88 (189)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 70
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=72.63 E-value=15 Score=23.89 Aligned_cols=36 Identities=17% Similarity=0.049 Sum_probs=23.7
Q ss_pred CCccEEEEEeccC-CCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEE
Q 026021 71 VSTIAVAVFFGAN-DACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLI 125 (244)
Q Consensus 71 ~~pd~vii~~G~N-D~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~ 125 (244)
..||+|++-+... +.. -.++++.+++. .+.++|+++
T Consensus 48 ~~~dlvi~d~~~~~~~~-------------------g~~~~~~l~~~~~~~~~~ii~~ 86 (127)
T 2gkg_A 48 DRPDLVVLAVDLSAGQN-------------------GYLICGKLKKDDDLKNVPIVII 86 (127)
T ss_dssp HCCSEEEEESBCGGGCB-------------------HHHHHHHHHHSTTTTTSCEEEE
T ss_pred cCCCEEEEeCCCCCCCC-------------------HHHHHHHHhcCccccCCCEEEE
Confidence 5689999876543 321 12466677766 577888888
No 71
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=72.60 E-value=20 Score=24.48 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=28.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+...+. +. -++++.+++..|.++|++++...-
T Consensus 57 ~~~dlvi~D~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~~ 97 (153)
T 3hv2_A 57 REVDLVISAAHLPQM------------DG-------PTLLARIHQQYPSTTRILLTGDPD 97 (153)
T ss_dssp SCCSEEEEESCCSSS------------CH-------HHHHHHHHHHCTTSEEEEECCCCC
T ss_pred CCCCEEEEeCCCCcC------------cH-------HHHHHHHHhHCCCCeEEEEECCCC
Confidence 789999998754433 11 245666677778899999987654
No 72
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=72.11 E-value=14 Score=24.13 Aligned_cols=40 Identities=8% Similarity=0.051 Sum_probs=25.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. + . -++++.+++.. +.++|++++...
T Consensus 45 ~~~dlvi~D~~l~~~--------------~----g-~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (127)
T 2jba_A 45 PWPDLILLAWMLPGG--------------S----G-IQFIKHLRRESMTRDIPVVMLTARG 86 (127)
T ss_dssp SCCSEEEEESEETTE--------------E----H-HHHHHHHHTSTTTTTSCEEEEEETT
T ss_pred cCCCEEEEecCCCCC--------------C----H-HHHHHHHHhCcccCCCCEEEEeCCC
Confidence 679999886543222 1 1 24666777653 678888887643
No 73
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=72.09 E-value=19 Score=24.00 Aligned_cols=40 Identities=20% Similarity=0.048 Sum_probs=27.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+.. -.++++.+++ ..+.++|++++...
T Consensus 53 ~~~dlii~d~~l~~~~-------------------g~~~~~~l~~~~~~~~~~ii~~s~~~ 94 (143)
T 3cnb_A 53 VKPDVVMLDLMMVGMD-------------------GFSICHRIKSTPATANIIVIAMTGAL 94 (143)
T ss_dssp TCCSEEEEETTCTTSC-------------------HHHHHHHHHTSTTTTTSEEEEEESSC
T ss_pred cCCCEEEEecccCCCc-------------------HHHHHHHHHhCccccCCcEEEEeCCC
Confidence 6799999986543321 1246677777 56788899888743
No 74
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=72.06 E-value=21 Score=24.43 Aligned_cols=39 Identities=10% Similarity=-0.095 Sum_probs=26.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..||+|++-+...+. +. .++++.+++..|.++|++++..
T Consensus 46 ~~~dliild~~l~~~------------~g-------~~~~~~l~~~~~~~pii~ls~~ 84 (155)
T 1qkk_A 46 DFAGIVISDIRMPGM------------DG-------LALFRKILALDPDLPMILVTGH 84 (155)
T ss_dssp TCCSEEEEESCCSSS------------CH-------HHHHHHHHHHCTTSCEEEEECG
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHHhhCCCCCEEEEECC
Confidence 679999998754332 11 2456666666788889998874
No 75
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=71.89 E-value=14 Score=24.62 Aligned_cols=40 Identities=0% Similarity=-0.028 Sum_probs=26.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh-CCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR-WPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~-~p~~~vil~~~~~ 129 (244)
..||+|++-+...+.. --++++.+++. .+.++|++++...
T Consensus 51 ~~~dlvi~D~~l~~~~-------------------g~~~~~~l~~~~~~~~~ii~~s~~~ 91 (136)
T 3hdv_A 51 KRIGLMITDLRMQPES-------------------GLDLIRTIRASERAALSIIVVSGDT 91 (136)
T ss_dssp TTEEEEEECSCCSSSC-------------------HHHHHHHHHTSTTTTCEEEEEESSC
T ss_pred CCCcEEEEeccCCCCC-------------------HHHHHHHHHhcCCCCCCEEEEeCCC
Confidence 4599998876543331 12566777776 6888899888744
No 76
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=71.74 E-value=14 Score=25.21 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=26.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~~ 129 (244)
..||+|++-+...|.. --++++.+++ ..++++|++++...
T Consensus 58 ~~~dliilD~~l~~~~-------------------g~~~~~~lr~~~~~~~~pii~~t~~~ 99 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMT-------------------GIDILKLVKENPHTRRSPVVILTTTD 99 (152)
T ss_dssp TCBEEEEECSBCSSSB-------------------HHHHHHHHHHSTTTTTSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCc-------------------HHHHHHHHHhcccccCCCEEEEecCC
Confidence 7899999876544331 1346666676 56788899988744
No 77
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=71.72 E-value=17 Score=25.22 Aligned_cols=16 Identities=31% Similarity=0.470 Sum_probs=13.2
Q ss_pred HHHHHHHHhcCCCeee
Q 026021 160 KACIEVAGECGLPVVD 175 (244)
Q Consensus 160 ~~~~~~a~~~~v~~iD 175 (244)
+.+.+.|+++|+.++-
T Consensus 107 ~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 107 PEFEKALKEAGIPVVA 122 (140)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCEEEc
Confidence 6777888899998885
No 78
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=71.42 E-value=18 Score=23.41 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=24.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. +. -++++.+++ .+.+++++++...
T Consensus 45 ~~~dlvi~d~~l~~~------------~g-------~~~~~~l~~-~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 45 QSVDLILLDINLPDE------------NG-------LMLTRALRE-RSTVGIILVTGRS 83 (122)
T ss_dssp SCCSEEEEESCCSSS------------CH-------HHHHHHHHT-TCCCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCC------------Ch-------HHHHHHHHh-cCCCCEEEEECCC
Confidence 679999887643332 11 135566666 4678888887643
No 79
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=71.27 E-value=18 Score=24.38 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=27.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+.. -.++++.+++ ..+.++|++++...
T Consensus 51 ~~~dlii~d~~l~~~~-------------------g~~~~~~l~~~~~~~~~pii~ls~~~ 92 (147)
T 2zay_A 51 THPHLIITEANMPKIS-------------------GMDLFNSLKKNPQTASIPVIALSGRA 92 (147)
T ss_dssp HCCSEEEEESCCSSSC-------------------HHHHHHHHHTSTTTTTSCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCC-------------------HHHHHHHHHcCcccCCCCEEEEeCCC
Confidence 5799999976544331 1256677776 56788899988743
No 80
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=70.82 E-value=19 Score=23.51 Aligned_cols=40 Identities=15% Similarity=-0.005 Sum_probs=26.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+. +. -++++.+++..|.++|++++...
T Consensus 46 ~~~dlvi~D~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDM------------SG-------VELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CCSEEEEEECCSTTS------------CH-------HHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCCEEEEECCCCCC------------CH-------HHHHHHHHhcCCCCCEEEEECCC
Confidence 678999887644332 11 24556666667788899988743
No 81
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=70.78 E-value=26 Score=25.70 Aligned_cols=41 Identities=17% Similarity=-0.029 Sum_probs=28.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|. + --++++.+++..|.++|++++...-
T Consensus 45 ~~~dlvllD~~l~~~------------~-------g~~~~~~lr~~~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 45 EPFDVVILDIMLPVH------------D-------GWEILKSMRESGVNTPVLMLTALSD 85 (225)
T ss_dssp SCCSEEEEESCCSSS------------C-------HHHHHHHHHHTTCCCCEEEEESSCH
T ss_pred CCCCEEEEeCCCCCC------------C-------HHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 679999987644332 1 1246777777778899999987654
No 82
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=70.43 E-value=20 Score=23.54 Aligned_cols=40 Identities=10% Similarity=0.013 Sum_probs=26.8
Q ss_pred CccEEEEEeccCC-CCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 72 STIAVAVFFGAND-ACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 72 ~pd~vii~~G~ND-~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
.||+|++-+...| . +. -++++.+++..|.++|++++...-
T Consensus 50 ~~dlvi~d~~l~~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~~ 90 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPP------------DG-------WQVARVAREIDPNMPIVYISGHAA 90 (132)
T ss_dssp CCCEEEEESCCSSSS------------CH-------HHHHHHHHHHCTTCCEEEEESSCC
T ss_pred CCCEEEEeeeCCCCC------------CH-------HHHHHHHHhcCCCCCEEEEeCCcc
Confidence 7999998765433 2 11 245666677677888999887543
No 83
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=70.40 E-value=19 Score=24.10 Aligned_cols=39 Identities=8% Similarity=-0.068 Sum_probs=24.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..||+|++-+..-+. + --++++.+++..+.+.|++++..
T Consensus 54 ~~~dlvi~d~~l~~~------------~-------g~~~~~~l~~~~~~~~ii~~s~~ 92 (143)
T 2qv0_A 54 NKVDAIFLDINIPSL------------D-------GVLLAQNISQFAHKPFIVFITAW 92 (143)
T ss_dssp CCCSEEEECSSCSSS------------C-------HHHHHHHHTTSTTCCEEEEEESC
T ss_pred CCCCEEEEecCCCCC------------C-------HHHHHHHHHccCCCceEEEEeCC
Confidence 679999987644332 1 12456666766666777777764
No 84
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=70.37 E-value=21 Score=23.85 Aligned_cols=40 Identities=8% Similarity=0.075 Sum_probs=26.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh----hCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN----RWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~----~~p~~~vil~~~~~ 129 (244)
..||+|++-+...|.. . -++++.+++ ..+.++|++++...
T Consensus 59 ~~~dlvi~D~~l~~~~------------g-------~~~~~~l~~~~~~~~~~~~ii~~t~~~ 102 (146)
T 3ilh_A 59 RWPSIICIDINMPGIN------------G-------WELIDLFKQHFQPMKNKSIVCLLSSSL 102 (146)
T ss_dssp CCCSEEEEESSCSSSC------------H-------HHHHHHHHHHCGGGTTTCEEEEECSSC
T ss_pred CCCCEEEEcCCCCCCC------------H-------HHHHHHHHHhhhhccCCCeEEEEeCCC
Confidence 7899999977544431 1 245666666 56788888888744
No 85
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=70.27 E-value=22 Score=25.36 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=27.4
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|.. - -++++.+++..|.++|++++...-
T Consensus 50 ~~~dlvl~D~~lp~~~------------g-------~~~~~~l~~~~~~~~ii~lt~~~~ 90 (184)
T 3rqi_A 50 EKFEFITVXLHLGNDS------------G-------LSLIAPLCDLQPDARILVLTGYAS 90 (184)
T ss_dssp SCCSEEEECSEETTEE------------S-------HHHHHHHHHHCTTCEEEEEESSCC
T ss_pred CCCCEEEEeccCCCcc------------H-------HHHHHHHHhcCCCCCEEEEeCCCC
Confidence 7799999865433220 0 245666777778899999987654
No 86
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=70.25 E-value=37 Score=26.54 Aligned_cols=49 Identities=6% Similarity=-0.047 Sum_probs=28.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
.++|.||.+.|...... .....+.-......+++.+++.+.+ +++.++.
T Consensus 61 ~~~d~Vih~a~~~~~~~-------~~~~~~~n~~~~~~ll~a~~~~~~~-r~v~~SS 109 (311)
T 3m2p_A 61 NDVDAVVHLAATRGSQG-------KISEFHDNEILTQNLYDACYENNIS-NIVYAST 109 (311)
T ss_dssp TTCSEEEECCCCCCSSS-------CGGGTHHHHHHHHHHHHHHHHTTCC-EEEEEEE
T ss_pred cCCCEEEEccccCCCCC-------hHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Confidence 57899998887654421 1111222334457778888776533 4666664
No 87
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=70.04 E-value=22 Score=23.79 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=26.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-+. +- -++++.+++..|.+++++++...-
T Consensus 43 ~~~dlvl~D~~lp~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~~ 83 (139)
T 2jk1_A 43 EWVQVIICDQRMPGR------------TG-------VDFLTEVRERWPETVRIIITGYTD 83 (139)
T ss_dssp SCEEEEEEESCCSSS------------CH-------HHHHHHHHHHCTTSEEEEEESCTT
T ss_pred CCCCEEEEeCCCCCC------------cH-------HHHHHHHHHhCCCCcEEEEeCCCC
Confidence 679999887643332 11 245666676677888888877543
No 88
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=68.61 E-value=9.6 Score=27.34 Aligned_cols=68 Identities=10% Similarity=-0.075 Sum_probs=44.1
Q ss_pred CeEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEec
Q 026021 3 PKIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFG 81 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G 81 (244)
-.|+.+||.+. .|...+.=...|.+.+.. .+.+...++-+.....+...+.+... ....|+||+.-|
T Consensus 4 v~Ii~tGdEl~-~G~i~D~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~-----------~~~~DlVittGG 71 (164)
T 2is8_A 4 VGILTVSDKGF-RGERQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWAD-----------REGLDLILTNGG 71 (164)
T ss_dssp EEEEEECHHHH-HTSSCCCHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHH-----------TSCCSEEEEESC
T ss_pred EEEEEEcCccc-CCCcccchHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHh-----------cCCCCEEEEcCC
Confidence 35889999997 665444444445555532 26677777777777666666666554 137899988865
Q ss_pred c
Q 026021 82 A 82 (244)
Q Consensus 82 ~ 82 (244)
+
T Consensus 72 ~ 72 (164)
T 2is8_A 72 T 72 (164)
T ss_dssp C
T ss_pred C
Confidence 4
No 89
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=68.53 E-value=40 Score=26.40 Aligned_cols=25 Identities=16% Similarity=0.186 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHHHHhhCCCceEE
Q 026021 99 LHEYKHNLHSIVSFLKNRWPNTLVL 123 (244)
Q Consensus 99 ~~~~~~~l~~~v~~~~~~~p~~~vi 123 (244)
.....+.+.++++.+++++|+..++
T Consensus 88 ~~~~~~~v~~~l~~~~~~~~~~~vv 112 (289)
T 3pzs_A 88 SPEQGSHILAAVAQVKQANPDAWYF 112 (289)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 3556788888999998887765443
No 90
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=68.20 E-value=24 Score=23.53 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=26.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~ 128 (244)
..||+|++-+..-+. + --++++.+++ ..+.++|++++..
T Consensus 49 ~~~dlvi~d~~l~~~------------~-------g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQ------------D-------GVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp SCCSEEEECSCCSSS------------C-------HHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred CCCCEEEEeCCCCCC------------C-------HHHHHHHHHhCcccCCCCEEEEecC
Confidence 779999986643332 1 1356667776 5678889999874
No 91
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=67.86 E-value=28 Score=25.74 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=28.6
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh-hCCCceEEEEcCCCCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN-RWPNTLVLLITPPPID 131 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~-~~p~~~vil~~~~~~~ 131 (244)
...||+|++-+..-|. +=-++++.+++ ..|.++|++++...-.
T Consensus 52 ~~~~dlvllD~~mp~~-------------------~G~~~~~~lr~~~~~~~~ii~lt~~~~~ 95 (225)
T 3klo_A 52 SRSIQMLVIDYSRISD-------------------DVLTDYSSFKHISCPDAKEVIINCPQDI 95 (225)
T ss_dssp GGGCCEEEEEGGGCCH-------------------HHHHHHHHHHHHHCTTCEEEEEEECTTC
T ss_pred ccCCCEEEEeCCCCCC-------------------CHHHHHHHHHHhhCCCCcEEEEECCcch
Confidence 3789999987643221 11345667777 6788999999876543
No 92
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=67.38 E-value=10 Score=25.32 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=27.8
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
...||+|++-+..-|.. --++++.+++..|.++|++++...
T Consensus 57 ~~~~dlvi~D~~l~~~~-------------------g~~~~~~l~~~~~~~~ii~~s~~~ 97 (135)
T 3snk_A 57 DTRPGIVILDLGGGDLL-------------------GKPGIVEARALWATVPLIAVSDEL 97 (135)
T ss_dssp TCCCSEEEEEEETTGGG-------------------GSTTHHHHHGGGTTCCEEEEESCC
T ss_pred ccCCCEEEEeCCCCCch-------------------HHHHHHHHHhhCCCCcEEEEeCCC
Confidence 37899999987543321 013566777777788899988743
No 93
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=67.34 E-value=24 Score=25.61 Aligned_cols=13 Identities=8% Similarity=0.210 Sum_probs=10.5
Q ss_pred CCCeEEEEccccc
Q 026021 1 MRPKIYLFGDSIT 13 (244)
Q Consensus 1 ~~~~il~iGDSit 13 (244)
|..+|+++.|.-.
T Consensus 12 m~~~iLivdd~~~ 24 (205)
T 1s8n_A 12 VPRRVLIAEDEAL 24 (205)
T ss_dssp CCCEEEEECSSHH
T ss_pred CCccEEEEECCHH
Confidence 5568999999877
No 94
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=67.25 E-value=8.2 Score=27.80 Aligned_cols=65 Identities=5% Similarity=-0.004 Sum_probs=38.4
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
-|+.+||.+. .|...+.=...|.+.+.. .+.+...++-... ..+...+.+... ...|+||+.-|+
T Consensus 11 ~ii~tGdEl~-~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~------------~~~DlVittGG~ 76 (164)
T 3pzy_A 11 RVIIASTRAS-SGEYEDRCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAID------------DDVDVILTSGGT 76 (164)
T ss_dssp EEEEECHHHH-C----CCHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHH------------TTCSEEEEESCC
T ss_pred EEEEECCCCC-CCceeeHHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHh------------CCCCEEEECCCC
Confidence 4899999998 554434333344444321 2566667776766 666666665443 468999887553
No 95
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=66.97 E-value=28 Score=26.43 Aligned_cols=40 Identities=13% Similarity=0.102 Sum_probs=26.4
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|. +=-++++.+++ .|.++|++++...-
T Consensus 80 ~~~DlvllD~~lp~~-------------------~G~~l~~~lr~-~~~~~iI~lt~~~~ 119 (249)
T 3q9s_A 80 DHPDLILLDLGLPDF-------------------DGGDVVQRLRK-NSALPIIVLTARDT 119 (249)
T ss_dssp SCCSEEEEECCSCHH-------------------HHHHHHHHHHT-TCCCCEEEEESCCS
T ss_pred CCCCEEEEcCCCCCC-------------------CHHHHHHHHHc-CCCCCEEEEECCCC
Confidence 679999986532221 22356666776 57888999987654
No 96
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=66.50 E-value=11 Score=30.40 Aligned_cols=51 Identities=22% Similarity=0.152 Sum_probs=35.4
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|..-. ......+.+.. -++.+++.+.+..|++.+++++.|
T Consensus 71 ~~~aDvVvi~ag~p~k--------pG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 71 CKDADIVCICAGANQK--------PGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp GTTCSEEEECCSCCCC--------TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred hCCCCEEEEecccCCC--------CCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 4678999999986322 11223444444 478888888888999988888765
No 97
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=66.09 E-value=12 Score=26.82 Aligned_cols=41 Identities=22% Similarity=0.216 Sum_probs=25.9
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhh----ccccceEeeccCCcc
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHF----SRTVDVVLRGYSGYN 45 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~----~~~~~v~n~g~~G~~ 45 (244)
||.-|+-+|+.+- + ++|....+.+++ ...++++..|..|..
T Consensus 4 M~~lVlGiGN~l~-g---DDG~G~~v~~~L~~~~~~~v~vid~gt~~~~ 48 (159)
T 2e85_A 4 VTDVLLCVGNSMM-G---DDGAGPLLAEKCAAAPKGNWVVIDGGSAPEN 48 (159)
T ss_dssp CCEEEEEECCGGG-G---GGGHHHHHHHHHHHSCCTTCEEEECTTCSGG
T ss_pred CCEEEEEECCccc-c---cccHHHHHHHHHhhhCCCCeEEEECCCCHHH
Confidence 7666888888877 3 355544444444 344778877777743
No 98
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=65.83 E-value=27 Score=23.29 Aligned_cols=39 Identities=8% Similarity=-0.069 Sum_probs=23.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~ 128 (244)
..||+|++-+..-|. +- -++++.+++. .+.++|++++..
T Consensus 47 ~~~dlvl~D~~lp~~------------~g-------~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 47 NLPDALICDVLLPGI------------DG-------YTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp SCCSEEEEESCCSSS------------CH-------HHHHHHHHHSGGGTTCCEEEEECT
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHHcCCCcCCccEEEEecC
Confidence 789999987644332 11 2344555553 356778888874
No 99
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=65.09 E-value=14 Score=30.02 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=36.0
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|..-- ......+.+.. -++++++.+.+..|++.+++++.|
T Consensus 87 ~~daDiVIitaG~p~k--------pG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 87 SAGSKLVVITAGARQQ--------EGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp CSSCSEEEECCSCCCC--------SSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred hCCCCEEEEeCCCCCC--------CCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 5778999999987532 12233444444 477888888888999988888865
No 100
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=65.04 E-value=31 Score=25.14 Aligned_cols=41 Identities=2% Similarity=-0.036 Sum_probs=28.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-+. +- -++++.+++..|.++|++++....
T Consensus 50 ~~~dlvllD~~lp~~------------~g-------~~~~~~lr~~~~~~~ii~ls~~~~ 90 (215)
T 1a04_A 50 LDPDLILLDLNMPGM------------NG-------LETLDKLREKSLSGRIVVFSVSNH 90 (215)
T ss_dssp HCCSEEEEETTSTTS------------CH-------HHHHHHHHHSCCCSEEEEEECCCC
T ss_pred cCCCEEEEeCCCCCC------------cH-------HHHHHHHHHhCCCCcEEEEECCCC
Confidence 678999987643332 11 256777777788889999987644
No 101
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=65.01 E-value=11 Score=27.41 Aligned_cols=68 Identities=12% Similarity=-0.064 Sum_probs=42.2
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhc-cccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEE
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFS-RTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVF 79 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~-~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~ 79 (244)
||--|+.+||.+. .|...+.=...|.+.+. ..+.+...++-+.....+...+.+... ..|+||..
T Consensus 4 ~~v~IistGdEll-~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~-------------~~DlVitt 69 (172)
T 3kbq_A 4 KNASVITVGNEIL-KGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALE-------------VSDLVVSS 69 (172)
T ss_dssp CEEEEEEECHHHH-TTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHH-------------HCSEEEEE
T ss_pred CEEEEEEEccccc-CCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHh-------------cCCEEEEc
Confidence 4446899999999 55543332333333331 126777778778777666666665544 37998887
Q ss_pred ecc
Q 026021 80 FGA 82 (244)
Q Consensus 80 ~G~ 82 (244)
-|+
T Consensus 70 GG~ 72 (172)
T 3kbq_A 70 GGL 72 (172)
T ss_dssp SCC
T ss_pred CCC
Confidence 553
No 102
>3jsz_A LGT1, putative uncharacterized protein; glucosyltransferase, legionnaire'S disease, legionella pneum transferase; HET: MSE UPG; 1.70A {Legionella pneumophila} PDB: 2wzg_A* 3jt1_A* 2wzf_A*
Probab=64.45 E-value=11 Score=30.88 Aligned_cols=89 Identities=9% Similarity=0.096 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhh
Q 026021 104 HNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQL 183 (244)
Q Consensus 104 ~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~ 183 (244)
...+..+.++|..+|++++.++-....- -..-+..++++|+++++.++|....-.+.
T Consensus 150 ~e~q~~Lle~re~nPG~~i~LVYsStlL-----------------------n~~a~~ql~~faken~IsllDids~k~e~ 206 (525)
T 3jsz_A 150 SKQQEALKRRREQYPGCKIRLIYSSSLL-----------------------NPEANRQMKAFAKKQNISLIDIDSVKTDS 206 (525)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEECSTTS-----------------------CHHHHHHHHHHHHHTTEEEEEGGGCCCCC
T ss_pred HHHHHHHHHHHhhCCCCeEEEEeehhhc-----------------------CHHHHHHHHHHHHhcCceEeehhhhcchH
Confidence 3445555668899999888888653221 12445778889999999999986654222
Q ss_pred hhccccccccc-ccCChhHHHHHHHHHHHHHhhcC
Q 026021 184 ADWKTAYLSDG-LHLNETGNRVVFEEVVMKLKTEG 217 (244)
Q Consensus 184 ~~~~~~~~~Dg-iHpn~~G~~~~a~~l~~~l~~~~ 217 (244)
.-+. +..+- -|.+.-|+-..|.-|.++|....
T Consensus 207 ~Lyn--l~k~EL~nLg~GGNpAaASDivRWlspv~ 239 (525)
T 3jsz_A 207 PLYP--LIKAELANLGMGGNPAAASDLCRWIPELF 239 (525)
T ss_dssp THHH--HHHHHHHTTTTTCCHHHHHHHHTTCTTTC
T ss_pred HHHH--HHHHHHHhccCCCCHHHHHHHHHhhHHhc
Confidence 1111 11222 36888899999999988876653
No 103
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=64.31 E-value=12 Score=26.97 Aligned_cols=66 Identities=11% Similarity=0.026 Sum_probs=41.6
Q ss_pred eEEEEcccccccccCCCChHHHHHHh----hcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEE
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHH----FSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAV 78 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~----~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii 78 (244)
-|+.+||.+. .|...+.=...|.+. +.. .+.+...++-+.....+...+.+... ...|+||.
T Consensus 9 ~Ii~~GdEl~-~G~i~D~n~~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~------------~~~DlVit 75 (167)
T 2g2c_A 9 AIIVVSDRIS-TGTRENKALPLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALK------------QGARFIIT 75 (167)
T ss_dssp EEEEECHHHH-HTSSCCCHHHHHHHHHCC----CEEEEEEEEEECSSHHHHHHHHHHHHH------------TTCSEEEE
T ss_pred EEEEECCccc-CCceeccHHHHHHHhHHhHHHHCCCEEeEEEEeCCCHHHHHHHHHHHHh------------CCCCEEEE
Confidence 5899999998 665444434445555 421 25677777777777666666665544 35899988
Q ss_pred Eecc
Q 026021 79 FFGA 82 (244)
Q Consensus 79 ~~G~ 82 (244)
.-|+
T Consensus 76 tGG~ 79 (167)
T 2g2c_A 76 AGGT 79 (167)
T ss_dssp ESCC
T ss_pred CCCC
Confidence 7654
No 104
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=63.96 E-value=49 Score=25.65 Aligned_cols=69 Identities=14% Similarity=0.234 Sum_probs=44.2
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
.+.++..|++|.+.. ..+.. .-|+..++.+|-+..... ...+.++....+.++++.
T Consensus 5 ~IgvfDSGvGGltv~------~~i~~------------~lP~~~~iy~~D~~~~Py------g~~s~~~i~~~~~~~~~~ 60 (267)
T 2gzm_A 5 AIGVIDSGVGGLTVA------KELIR------------QLPKERIIYLGDTARCPY------GPRSREEVRQFTWEMTEH 60 (267)
T ss_dssp CEEEEESSSTTHHHH------HHHHH------------HCTTSCEEEEECTTTCCC------TTSCHHHHHHHHHHHHHH
T ss_pred cEEEEeCCccHHHHH------HHHHH------------HCCCCCEEEecCCCCCCC------CCCCHHHHHHHHHHHHHH
Confidence 467888999995543 22222 233444567776655422 234577888888888888
Q ss_pred HHhhCCCceEEEEcC
Q 026021 113 LKNRWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~~~p~~~vil~~~ 127 (244)
+.+. +++.+++..
T Consensus 61 L~~~--g~d~iviaC 73 (267)
T 2gzm_A 61 LLDL--NIKMLVIAC 73 (267)
T ss_dssp HHTT--TCSEEEECC
T ss_pred HHHC--CCCEEEEeC
Confidence 8876 456777766
No 105
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=63.59 E-value=13 Score=27.71 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=26.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|. + --++++.+++..|.++|++++...-
T Consensus 46 ~~~dlvllD~~lp~~------------~-------g~~~~~~lr~~~~~~~ii~lt~~~~ 86 (225)
T 3c3w_A 46 ARPDVAVLDVRLPDG------------N-------GIELCRDLLSRMPDLRCLILTSYTS 86 (225)
T ss_dssp HCCSEEEECSEETTE------------E-------HHHHHHHHHHHCTTCEEEEGGGSSS
T ss_pred cCCCEEEEeCCCCCC------------C-------HHHHHHHHHHhCCCCcEEEEECCCC
Confidence 568999885533222 0 1245667777778899999987643
No 106
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=63.43 E-value=12 Score=27.19 Aligned_cols=66 Identities=8% Similarity=-0.017 Sum_probs=39.6
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhc----cccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEE
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFS----RTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVF 79 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~----~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~ 79 (244)
-|+.+||.+. .|...+.=...|.+.+. ..+.+ ..++-+.....+...+.+... ..+.|+||..
T Consensus 9 ~IistGdE~~-~G~i~Dsn~~~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~-----------~~~~DlVitt 75 (178)
T 2pbq_A 9 GVVTISDRAS-KGIYEDISGKAIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELAD-----------EKGCSLILTT 75 (178)
T ss_dssp EEEEECHHHH-HTSSCCHHHHHHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHH-----------TSCCSEEEEE
T ss_pred EEEEeCCcCC-CCCeecchHHHHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHh-----------cCCCCEEEEC
Confidence 5888999988 55543332333333222 22566 566777666666666666554 1378999887
Q ss_pred ecc
Q 026021 80 FGA 82 (244)
Q Consensus 80 ~G~ 82 (244)
-|+
T Consensus 76 GG~ 78 (178)
T 2pbq_A 76 GGT 78 (178)
T ss_dssp SCC
T ss_pred CCC
Confidence 653
No 107
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=63.26 E-value=14 Score=29.80 Aligned_cols=51 Identities=6% Similarity=0.060 Sum_probs=33.8
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|.+-- ......+.+.. -++.+++.+.+..|++.+++++.|
T Consensus 67 ~~~aDvVii~ag~~~k--------pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 120 (314)
T 3nep_X 67 TEDSDVCIITAGLPRS--------PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANP 120 (314)
T ss_dssp GTTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSS
T ss_pred hCCCCEEEECCCCCCC--------CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCc
Confidence 4778999999986532 12234455544 467888888888999988888765
No 108
>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1
Probab=63.01 E-value=27 Score=28.38 Aligned_cols=83 Identities=8% Similarity=0.073 Sum_probs=46.0
Q ss_pred CC-CeEEEEcccccccccCCCChHHHHHHhhcc--ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEE
Q 026021 1 MR-PKIYLFGDSITESSFTYGGWGASLAHHFSR--TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVA 77 (244)
Q Consensus 1 ~~-~~il~iGDSit~~g~~~~~~~~~l~~~~~~--~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vi 77 (244)
|+ .+|+++.|+-. ....+.+.+.. .+.++....++. +.++.. . ..+||+|+
T Consensus 1 M~~~rVLIVDD~~~--------~r~~L~~~L~~~~g~~vv~~a~~~~------eAl~~l-~-----------~~~pDlVl 54 (349)
T 1a2o_A 1 MSKIRVLSVDDSAL--------MRQIMTEIINSHSDMEMVATAPDPL------VARDLI-K-----------KFNPDVLT 54 (349)
T ss_dssp CCCEEEEEECSCHH--------HHHHHHHHHHTSTTEEEEEEESSHH------HHHHHH-H-----------HHCCSEEE
T ss_pred CCCCEEEEEECCHH--------HHHHHHHHHhcCCCcEEEEEeCCHH------HHHHHH-h-----------ccCCCEEE
Confidence 54 38999999987 33445555532 233333333331 122222 2 26799999
Q ss_pred EEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 78 VFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 78 i~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
+-+..-+. +- -++++.+++..| ++|++++...
T Consensus 55 lDi~mp~~------------dG-------lell~~l~~~~p-~pVIvlS~~~ 86 (349)
T 1a2o_A 55 LDVEMPRM------------DG-------LDFLEKLMRLRP-MPVVMVSSLT 86 (349)
T ss_dssp EECCCSSS------------CH-------HHHHHHHHHSSC-CCEEEEECCT
T ss_pred EECCCCCC------------CH-------HHHHHHHHhcCC-CcEEEEECCC
Confidence 87644332 11 145666666666 7888887643
No 109
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=62.85 E-value=27 Score=22.31 Aligned_cols=12 Identities=33% Similarity=0.559 Sum_probs=9.5
Q ss_pred CCCeEEEEccccc
Q 026021 1 MRPKIYLFGDSIT 13 (244)
Q Consensus 1 ~~~~il~iGDSit 13 (244)
|+ +|+++.|+-.
T Consensus 1 m~-~ilivdd~~~ 12 (120)
T 2a9o_A 1 MK-KILIVDDEKP 12 (120)
T ss_dssp -C-EEEEECSCHH
T ss_pred Cc-eEEEEcCCHH
Confidence 65 8999999877
No 110
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=61.76 E-value=31 Score=22.70 Aligned_cols=40 Identities=8% Similarity=-0.051 Sum_probs=26.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+..-|. +- .++++.+++..|.+++++++...
T Consensus 46 ~~~dlvl~D~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 46 EFFNLALFXIKLPDM------------EG-------TELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp SCCSEEEECSBCSSS------------BH-------HHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCCEEEEecCCCCC------------ch-------HHHHHHHHhhCCCCcEEEEeccc
Confidence 678999886644332 11 24556666667788898888754
No 111
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=61.61 E-value=16 Score=29.48 Aligned_cols=51 Identities=20% Similarity=0.151 Sum_probs=34.9
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-- ......+.+. .-++++++.+.+..|++.+++++.|
T Consensus 71 ~~~aDvVIi~ag~p~k--------~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 124 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRK--------PGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNP 124 (321)
T ss_dssp GTTCSEEEECCSCCCC--------TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred HCCCCEEEEcCCcCCC--------CCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 4678999999986432 1122333343 4577888888888999988888754
No 112
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=61.38 E-value=12 Score=27.15 Aligned_cols=68 Identities=9% Similarity=-0.027 Sum_probs=41.6
Q ss_pred eEEEEccccccccc----CCCChHHHHHHhhc-cccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEE
Q 026021 4 KIYLFGDSITESSF----TYGGWGASLAHHFS-RTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAV 78 (244)
Q Consensus 4 ~il~iGDSit~~g~----~~~~~~~~l~~~~~-~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii 78 (244)
-|+.+||+.++... ..+.=...|.+.+. ..+.+...++-+.........+..... ....|+||.
T Consensus 19 ~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a-----------~~~~DlVit 87 (178)
T 3iwt_A 19 YVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALS-----------IDEVDVIIS 87 (178)
T ss_dssp EEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHT-----------CTTCCEEEE
T ss_pred EEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHh-----------cCCCCEEEe
Confidence 38889998773211 11222233333331 127788888888877766666665554 378899998
Q ss_pred Eecc
Q 026021 79 FFGA 82 (244)
Q Consensus 79 ~~G~ 82 (244)
.-|+
T Consensus 88 tGG~ 91 (178)
T 3iwt_A 88 TGGT 91 (178)
T ss_dssp ESCC
T ss_pred cCCc
Confidence 8664
No 113
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=60.86 E-value=28 Score=23.35 Aligned_cols=36 Identities=3% Similarity=-0.101 Sum_probs=21.6
Q ss_pred CccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 72 STIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 72 ~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
.||+|++-+...+.. - -++++.+++..+ .++++++.
T Consensus 60 ~~dlvilD~~l~~~~------------g-------~~~~~~lr~~~~-~~iiil~~ 95 (145)
T 3kyj_B 60 NVDLILLDIEMPVMD------------G-------MEFLRHAKLKTR-AKICMLSS 95 (145)
T ss_dssp TCCEEEECTTSCCCT------------T-------CHHHHHHHHHCC-CEEC-CBS
T ss_pred CCCEEEEeCCCCCCC------------H-------HHHHHHHHhcCC-CCeEEEEE
Confidence 799999876544431 1 135566666655 66777765
No 114
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=60.78 E-value=17 Score=29.12 Aligned_cols=51 Identities=14% Similarity=0.111 Sum_probs=34.7
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|..-- ......+.+. .-++++++.+.+..|++.+++++.|
T Consensus 67 ~~~aDivii~ag~~rk--------pG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 120 (312)
T 3hhp_A 67 LEGADVVLISAGVARK--------PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (312)
T ss_dssp HTTCSEEEECCSCSCC--------TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred hCCCCEEEEeCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 4778999999886432 1223344444 4467777788888899988888755
No 115
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=60.34 E-value=17 Score=29.36 Aligned_cols=51 Identities=18% Similarity=0.081 Sum_probs=34.3
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|..-- ......+.+. .-++++++.+.+..|++.+++++.|
T Consensus 73 ~~~aDiVIiaag~p~k--------~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRK--------PGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp GTTCSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred HCCCCEEEEccCcCCC--------CCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 5778999999986432 1122334443 4577888888888999988888865
No 116
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=60.22 E-value=21 Score=28.29 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=35.2
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-- ......+.+. .-++.+++.+.+..|++.+++++.|
T Consensus 67 ~~~aDiVViaag~~~k--------pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP 120 (294)
T 1oju_A 67 LKGSEIIVVTAGLARK--------PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp GTTCSEEEECCCCCCC--------SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred hCCCCEEEECCCCCCC--------CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 4678999999986532 1122334443 4467788888888999988888854
No 117
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=59.70 E-value=49 Score=24.30 Aligned_cols=41 Identities=12% Similarity=-0.015 Sum_probs=27.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-+. +. -++++.+++..|.++|++++...-
T Consensus 50 ~~~dlvllD~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~lt~~~~ 90 (233)
T 1ys7_A 50 NRPDAIVLDINMPVL------------DG-------VSVVTALRAMDNDVPVCVLSARSS 90 (233)
T ss_dssp SCCSEEEEESSCSSS------------CH-------HHHHHHHHHTTCCCCEEEEECCCT
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHHhcCCCCCEEEEEcCCC
Confidence 679999987643332 11 246677777778889999987543
No 118
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=59.66 E-value=28 Score=24.98 Aligned_cols=65 Identities=12% Similarity=-0.046 Sum_probs=39.6
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhc-cccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFS-RTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~-~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
-|+.+||.+ |...+.=...|.+.+. ..+.+...++-+.....+...+.+... ....|+||+.-|+
T Consensus 17 ~Ii~tGdEl---g~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~-----------~~~~DlVittGG~ 82 (169)
T 1y5e_A 17 KIVTISDTR---TEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYH-----------KEDVDVVLTNGGT 82 (169)
T ss_dssp EEEEECSSC---CTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHT-----------CTTCSEEEEECCC
T ss_pred EEEEEcCcc---CeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHh-----------cCCCCEEEEcCCC
Confidence 478899998 3222322223333331 126677778888777766666666554 2478999887654
No 119
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=59.63 E-value=32 Score=22.04 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=25.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. +. -++++.+++..|.+++++++...
T Consensus 43 ~~~dlil~D~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDE------------DG-------LSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp SCCSEEEECSCCSSS------------CH-------HHHHHHHHHTTCCSCEEEEESCC
T ss_pred cCCCEEEEecCCCCC------------CH-------HHHHHHHHhcCCCCCEEEEecCC
Confidence 678999875543222 11 13566667766788898888743
No 120
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=59.27 E-value=18 Score=28.99 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=35.6
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-- ......+.+.. -++.+++.+.+..|++.+++++.|
T Consensus 76 ~~~aDvVIiaag~p~k--------pg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 76 TADSDVVVITAGIARK--------PGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp GTTCSEEEECCSCCCC--------TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred hCCCCEEEEeCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 5789999999996432 11223444443 567888888888999988888865
No 121
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=58.99 E-value=62 Score=25.22 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=45.6
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
.+.++..|++|-|.-. .+.+.+ |+.=+|.+|-|--... +.-+.++..+...++++.
T Consensus 7 ~IgvfDSGvGGltv~~---~i~~~l---------------P~~~~iy~~D~a~~PY------G~ks~~~i~~~~~~~~~~ 62 (269)
T 3ist_A 7 AIGFIDSGVGGLTVVR---EVLKQL---------------PHEQVYYLGDTARCPY------GPRDKEEVAKFTWEMTNF 62 (269)
T ss_dssp CEEEEESSSTTHHHHH---HHHHHC---------------TTCCEEEEECGGGCCC------TTSCHHHHHHHHHHHHHH
T ss_pred cEEEEECCccHHHHHH---HHHHHC---------------CCCcEEEEeCCCCCCC------CCCCHHHHHHHHHHHHHH
Confidence 3678999999966532 223222 3333457775554422 345788889999999999
Q ss_pred HHhhCCCceEEEEcC
Q 026021 113 LKNRWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~~~p~~~vil~~~ 127 (244)
+.+. +++.+++..
T Consensus 63 L~~~--g~~~IVIAC 75 (269)
T 3ist_A 63 LVDR--GIKMLVIAC 75 (269)
T ss_dssp HHHT--TCSEEEECC
T ss_pred HHHC--CCCEEEEeC
Confidence 9987 456777776
No 122
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=58.82 E-value=42 Score=23.22 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=13.0
Q ss_pred HHHHHHHHhcCCCeee
Q 026021 160 KACIEVAGECGLPVVD 175 (244)
Q Consensus 160 ~~~~~~a~~~~v~~iD 175 (244)
+.+.+.|+++|+.++-
T Consensus 114 ~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 114 REASKKADEAGLIIVA 129 (144)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCEEEc
Confidence 6777888899998884
No 123
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=57.56 E-value=43 Score=24.61 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=24.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. +. -++++.+++. |.++|++++...
T Consensus 47 ~~~dlvllD~~l~~~------------~g-------~~~~~~l~~~-~~~~ii~lt~~~ 85 (230)
T 2oqr_A 47 AGADIVLLDLMLPGM------------SG-------TDVCKQLRAR-SSVPVIMVTARD 85 (230)
T ss_dssp HCCSEEEEESSCSSS------------CH-------HHHHHHHHHH-CSCSEEEEECCH
T ss_pred cCCCEEEEECCCCCC------------CH-------HHHHHHHHcC-CCCCEEEEeCCC
Confidence 579999887644332 11 1345555554 678898888754
No 124
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=57.46 E-value=19 Score=26.49 Aligned_cols=65 Identities=8% Similarity=-0.112 Sum_probs=42.0
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
-|+.+||.+. .|. .+.=...|.+.+.. .+.+...++-......+...+.+... ...|+||..-|+
T Consensus 34 aIistGdEl~-~G~-~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~------------~~~DlVIttGGt 99 (185)
T 3rfq_A 34 LVVVVDDRTA-HGD-EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVI------------GGVDLVVSVGGT 99 (185)
T ss_dssp EEEEECHHHH-TTC-CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHH------------TTCSEEEEESCC
T ss_pred EEEEECcccC-CCC-cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHh------------CCCCEEEECCCC
Confidence 4888999998 555 45444444444421 26677777777776666666665443 568999888554
No 125
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=57.45 E-value=27 Score=27.88 Aligned_cols=51 Identities=10% Similarity=0.127 Sum_probs=33.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH---HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY---KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~---~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|++..|..-.. .....+.+ ..-++.+++.+++..|++.+++++.|
T Consensus 66 ~~~aDvVvi~ag~~~~~--------g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP 119 (314)
T 1mld_A 66 LKGCDVVVIPAGVPRKP--------GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (314)
T ss_dssp HTTCSEEEECCSCCCCT--------TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred hCCCCEEEECCCcCCCC--------CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence 47789999999864321 11122223 35677777888888899988887554
No 126
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=57.09 E-value=45 Score=23.05 Aligned_cols=38 Identities=8% Similarity=0.137 Sum_probs=24.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..||+|++-+...+. +. -++++.+++..| +++++++..
T Consensus 70 ~~~dlvilD~~l~~~------------~g-------~~l~~~lr~~~~-~~ii~~s~~ 107 (164)
T 3t8y_A 70 LKPDVITMDIEMPNL------------NG-------IEALKLIMKKAP-TRVIMVSSL 107 (164)
T ss_dssp HCCSEEEECSSCSSS------------CH-------HHHHHHHHHHSC-CEEEEEESS
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHHhcCC-ceEEEEecC
Confidence 679999887654333 11 245666777766 778877764
No 127
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=56.61 E-value=56 Score=24.54 Aligned_cols=42 Identities=12% Similarity=-0.045 Sum_probs=29.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPID 131 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~ 131 (244)
..||+|++-+...|.. --++++.+++..|.++|++++.....
T Consensus 66 ~~~dlvllD~~lp~~~-------------------g~~~~~~lr~~~~~~~ii~lt~~~~~ 107 (250)
T 3r0j_A 66 TRPDAVILDVXMPGMD-------------------GFGVLRRLRADGIDAPALFLTARDSL 107 (250)
T ss_dssp HCCSEEEEESCCSSSC-------------------HHHHHHHHHHTTCCCCEEEEECSTTH
T ss_pred CCCCEEEEeCCCCCCC-------------------HHHHHHHHHhcCCCCCEEEEECCCCH
Confidence 6799999876544331 12466777777788899999886543
No 128
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=55.71 E-value=41 Score=22.15 Aligned_cols=39 Identities=13% Similarity=-0.059 Sum_probs=24.2
Q ss_pred CCccEEEEEeccC-CCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGAN-DACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~N-D~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+... +. +. .++++.+++. +.++|++++...
T Consensus 53 ~~~dlii~d~~~~~~~------------~g-------~~~~~~l~~~-~~~~ii~ls~~~ 92 (140)
T 3cg0_A 53 LRPDIALVDIMLCGAL------------DG-------VETAARLAAG-CNLPIIFITSSQ 92 (140)
T ss_dssp HCCSEEEEESSCCSSS------------CH-------HHHHHHHHHH-SCCCEEEEECCC
T ss_pred CCCCEEEEecCCCCCC------------CH-------HHHHHHHHhC-CCCCEEEEecCC
Confidence 5699999986542 22 11 1345555555 678899888744
No 129
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=55.25 E-value=15 Score=29.74 Aligned_cols=51 Identities=24% Similarity=0.191 Sum_probs=30.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHH---HHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHN---LHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~---l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|..-- ......+.+..| ++++++.+.+..|++.+++++.|
T Consensus 74 ~~~aDiVvi~ag~~~k--------pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 74 AKDADLVVITAGAPQK--------PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp GTTCSEEEECCCCC------------------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred hcCCCEEEECCCCCCC--------CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 5778999999886422 112233444443 77888888888999988888765
No 130
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=55.15 E-value=29 Score=27.94 Aligned_cols=50 Identities=8% Similarity=-0.022 Sum_probs=33.9
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH-H---HHHHHHHHHHHhhC-CCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY-K---HNLHSIVSFLKNRW-PNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~-~---~~l~~~v~~~~~~~-p~~~vil~~~~ 128 (244)
....|+||+..|.+-. +..+..++ . .-++.+++.+++.. |++.+++++.|
T Consensus 81 l~~aD~Vi~~ag~~~~---------~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNP 135 (329)
T 1b8p_A 81 FKDADVALLVGARPRG---------PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNP 135 (329)
T ss_dssp TTTCSEEEECCCCCCC---------TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hCCCCEEEEeCCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCc
Confidence 3578999999986543 12223333 2 34777888888885 99888888854
No 131
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=55.11 E-value=56 Score=23.86 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=15.6
Q ss_pred HHHHHHHhhCC-CceEEEEcCCCC
Q 026021 108 SIVSFLKNRWP-NTLVLLITPPPI 130 (244)
Q Consensus 108 ~~v~~~~~~~p-~~~vil~~~~~~ 130 (244)
++++.+++. + .++|++++...-
T Consensus 57 ~~~~~lr~~-~~~~~ii~lt~~~~ 79 (223)
T 2hqr_A 57 SFVSRIKEK-HSSIVVLVSSDNPT 79 (223)
T ss_dssp HHHHHHHHH-CTTSEEEEEESSCC
T ss_pred HHHHHHHhC-CCCCcEEEEECCCC
Confidence 456666666 6 788999987654
No 132
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=54.65 E-value=29 Score=28.09 Aligned_cols=51 Identities=16% Similarity=0.198 Sum_probs=35.7
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|..-- ......+.+.. -++++++.+.+..|++.+++++.|
T Consensus 85 ~~~aDiVvi~aG~~~k--------pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 85 TANSKLVIITAGARQQ--------EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp GTTEEEEEECCSCCCC--------TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred hCCCCEEEEccCCCCC--------CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 5788999999886432 12334444544 467777888888999988888865
No 133
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=53.59 E-value=24 Score=25.23 Aligned_cols=67 Identities=9% Similarity=0.029 Sum_probs=40.5
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhcc------ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEE
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSR------TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVA 77 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~------~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vi 77 (244)
-|+.+||.+. .|...+.=...+.+.+.. .+.+...++-......+...+.+... ..+.|+||
T Consensus 9 ~IistGde~~-~G~~~d~n~~~l~~~l~~~~~~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~-----------~~~~DlVi 76 (167)
T 1uuy_A 9 AILTVSDTVS-AGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSD-----------VDEMDLIL 76 (167)
T ss_dssp EEEEECHHHH-TTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEECSCHHHHHHHHHHHHH-----------TSCCSEEE
T ss_pred EEEEECCccc-CCCCccCcHHHHHHHHHhccccCCCcEEeEEEEcCCCHHHHHHHHHHHHh-----------cCCCCEEE
Confidence 4788999986 554433222222222211 25677777777777666666666554 14789998
Q ss_pred EEecc
Q 026021 78 VFFGA 82 (244)
Q Consensus 78 i~~G~ 82 (244)
..-|+
T Consensus 77 ttGG~ 81 (167)
T 1uuy_A 77 TLGGT 81 (167)
T ss_dssp EESCC
T ss_pred ECCCC
Confidence 87654
No 134
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=53.26 E-value=36 Score=27.14 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=34.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHH---HHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHN---LHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~---l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-. ......+.+..+ ++++++.+.+..|++.+++++.|
T Consensus 65 ~~~aD~Vi~~ag~~~k--------~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (308)
T 2d4a_B 65 MRGSDIVLVTAGIGRK--------PGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNP 118 (308)
T ss_dssp GTTCSEEEECCSCCCC--------SSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred hCCCCEEEEeCCCCCC--------CCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 5789999999886332 112233434444 77777888887899988887654
No 135
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=53.01 E-value=27 Score=28.04 Aligned_cols=54 Identities=17% Similarity=0.070 Sum_probs=32.9
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-.. . ..+..-...-..-++++++.+.+..|++.+++++.|
T Consensus 70 ~~~aDvVii~ag~~~~~--g---~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 123 (318)
T 1ez4_A 70 CKDADLVVITAGAPQKP--G---ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANP 123 (318)
T ss_dssp GTTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred hCCCCEEEECCCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 46889999999874321 0 011111223345677788888888999988887655
No 136
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=52.95 E-value=33 Score=27.22 Aligned_cols=50 Identities=14% Similarity=0.085 Sum_probs=33.1
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhH-HH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHE-YK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~-~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|.... +..+... +. .-++.+++.+++..|++.|++++.|
T Consensus 68 ~~~aDvVi~~ag~~~~---------~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP 121 (303)
T 1o6z_A 68 TAGSDVVVITAGIPRQ---------PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP 121 (303)
T ss_dssp GTTCSEEEECCCCCCC---------TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred hCCCCEEEEcCCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 4679999999986432 1112222 22 4567788888888898877776554
No 137
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=52.71 E-value=1.1e+02 Score=27.88 Aligned_cols=42 Identities=14% Similarity=0.222 Sum_probs=29.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
.++|+||+-+..-+ .+...+-.++++.+|+.+++++|++++.
T Consensus 52 ~~~d~vilDi~lp~---------------~~~~~~G~~ll~~iR~~~~~iPIi~lTa 93 (755)
T 2vyc_A 52 EAIDCLMFSYQMEH---------------PDEHQNVRQLIGKLHERQQNVPVFLLGD 93 (755)
T ss_dssp CCCSEEEEECCCCS---------------HHHHHHHHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCCcEEEEeCCCCc---------------ccccccHHHHHHHHHHhCCCCCEEEEec
Confidence 46999999864321 1222333478999999988899999987
No 138
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=52.66 E-value=59 Score=23.03 Aligned_cols=63 Identities=14% Similarity=0.097 Sum_probs=41.4
Q ss_pred cceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHH
Q 026021 34 VDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFL 113 (244)
Q Consensus 34 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 113 (244)
+++++.|..- +.. .+.+... ..+||+|.++.- ...+...+.++++.+
T Consensus 47 ~eVi~lG~~~-p~e----~lv~aa~-----------~~~~diV~lS~~-----------------~~~~~~~~~~~i~~L 93 (161)
T 2yxb_A 47 FEVVYTGLRQ-TPE----QVAMAAV-----------QEDVDVIGVSIL-----------------NGAHLHLMKRLMAKL 93 (161)
T ss_dssp CEEECCCSBC-CHH----HHHHHHH-----------HTTCSEEEEEES-----------------SSCHHHHHHHHHHHH
T ss_pred CEEEECCCCC-CHH----HHHHHHH-----------hcCCCEEEEEee-----------------chhhHHHHHHHHHHH
Confidence 7888877653 222 2222333 389999988852 123478889999999
Q ss_pred HhhCC-CceEEEEcCCC
Q 026021 114 KNRWP-NTLVLLITPPP 129 (244)
Q Consensus 114 ~~~~p-~~~vil~~~~~ 129 (244)
++.++ +++|++-+.++
T Consensus 94 ~~~g~~~i~v~vGG~~~ 110 (161)
T 2yxb_A 94 RELGADDIPVVLGGTIP 110 (161)
T ss_dssp HHTTCTTSCEEEEECCC
T ss_pred HhcCCCCCEEEEeCCCc
Confidence 99864 67777777643
No 139
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=52.56 E-value=46 Score=22.10 Aligned_cols=40 Identities=8% Similarity=0.067 Sum_probs=25.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. + --++++.+++.. +.++|++++...
T Consensus 61 ~~~dlvi~D~~l~~~------------~-------g~~~~~~l~~~~~~~~~~ii~~t~~~ 102 (149)
T 1k66_A 61 PRPAVILLDLNLPGT------------D-------GREVLQEIKQDEVLKKIPVVIMTTSS 102 (149)
T ss_dssp CCCSEEEECSCCSSS------------C-------HHHHHHHHTTSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEECCCCCC------------C-------HHHHHHHHHhCcccCCCeEEEEeCCC
Confidence 578999987643332 1 125566676654 677888887743
No 140
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=52.54 E-value=27 Score=25.90 Aligned_cols=67 Identities=9% Similarity=-0.027 Sum_probs=35.2
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhcc-ccc--eEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEe
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSR-TVD--VVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFF 80 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~--v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~ 80 (244)
.|+.+||.+. .|...+.=...|.+.+.. ... +...++-+.....+...+.+... ....|+||..-
T Consensus 7 ~IIttGdEl~-~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~-----------~~~~DlVitTG 74 (195)
T 1di6_A 7 GLVSISDRAS-SGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVD-----------EMSCHLVLTTG 74 (195)
T ss_dssp EEEEEECC--------CCHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHH-----------TSCCSEEEEES
T ss_pred EEEEECCCCC-CCeEEchHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHh-----------cCCCCEEEECC
Confidence 5788999998 555433333334443321 133 44556666666666666666555 24789998886
Q ss_pred cc
Q 026021 81 GA 82 (244)
Q Consensus 81 G~ 82 (244)
|+
T Consensus 75 Gt 76 (195)
T 1di6_A 75 GT 76 (195)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 141
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=52.27 E-value=49 Score=24.60 Aligned_cols=40 Identities=8% Similarity=0.016 Sum_probs=24.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|. +. -++++.+++. +.++|++++...-
T Consensus 48 ~~~dlvilD~~l~~~------------~g-------~~~~~~lr~~-~~~~ii~lt~~~~ 87 (238)
T 2gwr_A 48 LRPDLVLLDLMLPGM------------NG-------IDVCRVLRAD-SGVPIVMLTAKTD 87 (238)
T ss_dssp HCCSEEEEESSCSSS------------CH-------HHHHHHHHTT-CCCCEEEEEETTC
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHHhC-CCCcEEEEeCCCC
Confidence 678999887654332 11 1355666665 3677888876543
No 142
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=51.67 E-value=21 Score=29.35 Aligned_cols=49 Identities=12% Similarity=0.140 Sum_probs=28.8
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEc
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLIT 126 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~ 126 (244)
..+||+||++.|. |....+.. ....++.+.|.. +.+.+++.. .+++++.
T Consensus 289 ~f~PdlIvvsaG~-Da~~~Dpl-g~l~lt~~~~~~----~~~~l~~~~--~~~v~vl 337 (362)
T 3men_A 289 RFAPDALVLSLGF-DVYRDDPQ-SQVAVTTDGFGR----LGHLIGALR--LPTVIVQ 337 (362)
T ss_dssp HHCCSEEEEEECS-TTBTTCTT-CCBCBCHHHHHH----HHHHHHTTC--CCEEEEE
T ss_pred hcCCCEEEEECcc-cCcCCCCC-CCccCCHHHHHH----HHHHHHhhC--CCEEEEE
Confidence 4899999999998 55433211 123456666665 555566653 2354443
No 143
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=50.86 E-value=30 Score=27.73 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=32.0
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccC-hhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVP-LHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~-~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-. +..+ .+.+. .-++++++.+.+..|++.+++++.|
T Consensus 72 ~~~aDvVii~~g~p~k---------~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 125 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRK---------PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNP 125 (318)
T ss_dssp GTTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred hCCCCEEEEcCCCCCC---------CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 4789999999986321 1112 22222 3377888888888899988887655
No 144
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=50.85 E-value=35 Score=27.22 Aligned_cols=51 Identities=18% Similarity=0.192 Sum_probs=34.1
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH---HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY---KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~---~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-.. .....+.+ ..-++++++.+++..|++.+++++.|
T Consensus 65 ~~~aD~Vii~ag~~~~~--------g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (310)
T 2xxj_A 65 LEGARAVVLAAGVAQRP--------GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP 118 (310)
T ss_dssp GTTEEEEEECCCCCCCT--------TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred hCCCCEEEECCCCCCCC--------CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 46889999999864221 11122223 34577788888888999988887655
No 145
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=49.96 E-value=51 Score=21.52 Aligned_cols=41 Identities=5% Similarity=0.010 Sum_probs=26.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~~ 130 (244)
..||+|++-+...+. +. -++++.+++.. +.++|++++...-
T Consensus 54 ~~~dlvi~d~~~~~~------------~g-------~~~~~~l~~~~~~~~~pii~ls~~~~ 96 (140)
T 1k68_A 54 SRPDLILLXLNLPKK------------DG-------REVLAEIKSDPTLKRIPVVVLSTSIN 96 (140)
T ss_dssp CCCSEEEECSSCSSS------------CH-------HHHHHHHHHSTTGGGSCEEEEESCCC
T ss_pred CCCcEEEEecCCCcc------------cH-------HHHHHHHHcCcccccccEEEEecCCc
Confidence 679999987654332 11 24566666654 6677888877543
No 146
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=49.78 E-value=1.1e+02 Score=26.92 Aligned_cols=65 Identities=6% Similarity=-0.035 Sum_probs=43.8
Q ss_pred cceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHH
Q 026021 34 VDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFL 113 (244)
Q Consensus 34 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 113 (244)
++|++.|..- ....+.. ... ..+||+|.++.- .......+..+++.+
T Consensus 127 ~eVi~LG~~v-P~e~iv~----aa~-----------~~~~diVgLS~l-----------------~t~~~~~m~~~i~~L 173 (579)
T 3bul_A 127 YEIVDLGVMV-PAEKILR----TAK-----------EVNADLIGLSGL-----------------ITPSLDEMVNVAKEM 173 (579)
T ss_dssp CEEEECCSSB-CHHHHHH----HHH-----------HHTCSEEEEECC-----------------STHHHHHHHHHHHHH
T ss_pred CEEEECCCCC-CHHHHHH----HHH-----------HcCCCEEEEEec-----------------CCCCHHHHHHHHHHH
Confidence 8899988873 3333222 222 378999988752 122356788999999
Q ss_pred HhhCCCceEEEEcCCCCC
Q 026021 114 KNRWPNTLVLLITPPPID 131 (244)
Q Consensus 114 ~~~~p~~~vil~~~~~~~ 131 (244)
++.+++++|++.+.+...
T Consensus 174 r~~g~~i~ViVGGa~~~~ 191 (579)
T 3bul_A 174 ERQGFTIPLLIGGATTSK 191 (579)
T ss_dssp HHTTCCSCEEEESTTCCH
T ss_pred HHcCCCCeEEEEccccch
Confidence 998888888777765543
No 147
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=49.46 E-value=40 Score=27.06 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=34.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCCCCCh
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPPPIDE 132 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~~~~~ 132 (244)
....|+||+..|..... .....+.+. .-++.+++.+++..|++.|++.+. |++.
T Consensus 74 l~gaDvVi~~ag~~~~~--------g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN-Pv~~ 130 (326)
T 1smk_A 74 LTGMDLIIVPAGVPRKP--------GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN-PVNS 130 (326)
T ss_dssp HTTCSEEEECCCCCCCS--------SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS-SHHH
T ss_pred cCCCCEEEEcCCcCCCC--------CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC-chHH
Confidence 36789999999965431 111222233 457778888888888887777654 4443
No 148
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=48.83 E-value=71 Score=24.58 Aligned_cols=64 Identities=8% Similarity=-0.103 Sum_probs=41.6
Q ss_pred cceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHH
Q 026021 34 VDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFL 113 (244)
Q Consensus 34 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 113 (244)
+++++.|..- +..... +... ..+||+|.++.-..-. ...+.++++.+
T Consensus 152 ~~Vi~LG~~v-p~e~l~----~~~~-----------~~~~d~V~lS~l~~~~-----------------~~~~~~~i~~l 198 (258)
T 2i2x_B 152 YNVVDLGRDV-PAEEVL----AAVQ-----------KEKPIMLTGTALMTTT-----------------MYAFKEVNDML 198 (258)
T ss_dssp CEEEEEEEEC-CSHHHH----HHHH-----------HHCCSEEEEECCCTTT-----------------TTHHHHHHHHH
T ss_pred CEEEECCCCC-CHHHHH----HHHH-----------HcCCCEEEEEeeccCC-----------------HHHHHHHHHHH
Confidence 7888888752 333222 2222 3789999888632111 34688899999
Q ss_pred HhhCCCceEEEEcCCCC
Q 026021 114 KNRWPNTLVLLITPPPI 130 (244)
Q Consensus 114 ~~~~p~~~vil~~~~~~ 130 (244)
++.+++++|++.+.+..
T Consensus 199 ~~~~~~~~v~vGG~~~~ 215 (258)
T 2i2x_B 199 LENGIKIPFACGGGAVN 215 (258)
T ss_dssp HTTTCCCCEEEESTTCC
T ss_pred HhcCCCCcEEEECccCC
Confidence 99888887777776543
No 149
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=48.37 E-value=41 Score=26.16 Aligned_cols=12 Identities=25% Similarity=0.523 Sum_probs=8.0
Q ss_pred CCCeEEEEccccc
Q 026021 1 MRPKIYLFGDSIT 13 (244)
Q Consensus 1 ~~~~il~iGDSit 13 (244)
|+ |||++|+|--
T Consensus 4 m~-~vLiV~g~~~ 15 (259)
T 3rht_A 4 MT-RVLYCGDTSL 15 (259)
T ss_dssp ---CEEEEESSCT
T ss_pred Cc-eEEEECCCCc
Confidence 76 9999987744
No 150
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=47.84 E-value=91 Score=23.84 Aligned_cols=68 Identities=13% Similarity=0.192 Sum_probs=44.4
Q ss_pred cceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHH
Q 026021 34 VDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFL 113 (244)
Q Consensus 34 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 113 (244)
+.++..|++|.+.. ..+.. .-|+..+|.+|-+-.... ...+.++....+.+.++.+
T Consensus 3 igvfDSG~GGltv~------~~l~~------------~lP~~~~iy~~D~~~~Py------g~~s~~~i~~~~~~~~~~L 58 (255)
T 2jfz_A 3 IGVFDSGVGGFSVL------KSLLK------------ARLFDEIIYYGDSARVPY------GTKDPTTIKQFGLEALDFF 58 (255)
T ss_dssp EEEEESSSTTHHHH------HHHHH------------TTCCSEEEEEECTTTCCC------TTSCHHHHHHHHHHHHHHH
T ss_pred EEEEECCccHHHHH------HHHHH------------HCCCCCEEEEeCCCCCCC------CCCCHHHHHHHHHHHHHHH
Confidence 56788899996553 22222 445566778875544321 2346788888999999998
Q ss_pred HhhCCCceEEEEcC
Q 026021 114 KNRWPNTLVLLITP 127 (244)
Q Consensus 114 ~~~~p~~~vil~~~ 127 (244)
.+.+ ++.+++..
T Consensus 59 ~~~g--~d~iviaC 70 (255)
T 2jfz_A 59 KPHE--IELLIVAC 70 (255)
T ss_dssp GGGC--CSCEEECC
T ss_pred HHCC--CCEEEEeC
Confidence 8874 45666655
No 151
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=47.72 E-value=23 Score=28.86 Aligned_cols=51 Identities=16% Similarity=0.035 Sum_probs=32.0
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhCCCce-EEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRWPNTL-VLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~p~~~-vil~~~~ 128 (244)
....|+|||..|.... ......+.+.. -++.+++.+.+..|++. +++++.|
T Consensus 74 l~dADvVvitaG~p~k--------pG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNP 128 (343)
T 3fi9_A 74 LTDAKYIVSSGGAPRK--------EGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNP 128 (343)
T ss_dssp HTTEEEEEECCC---------------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSS
T ss_pred hCCCCEEEEccCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCc
Confidence 4678999999886322 11223344444 47888888888899996 6666654
No 152
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=47.42 E-value=54 Score=22.68 Aligned_cols=16 Identities=38% Similarity=0.436 Sum_probs=13.3
Q ss_pred HHHHHHHHhcCCCeee
Q 026021 160 KACIEVAGECGLPVVD 175 (244)
Q Consensus 160 ~~~~~~a~~~~v~~iD 175 (244)
+.+.+.|+++|+.++-
T Consensus 107 ~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 107 EQAAVLAREAGLSVVM 122 (145)
T ss_dssp HHHHHHHHTTTCEEEC
T ss_pred HHHHHHHHHcCCEEEc
Confidence 6777888999999983
No 153
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=47.32 E-value=30 Score=27.67 Aligned_cols=51 Identities=20% Similarity=0.129 Sum_probs=33.6
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChh---HHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLH---EYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~---~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-.. .....+ .-..-++++++.+.+..|++.+++++.|
T Consensus 72 ~~~aDvVvi~ag~~~~~--------g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 125 (317)
T 3d0o_A 72 CHDADLVVICAGAAQKP--------GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNP 125 (317)
T ss_dssp GTTCSEEEECCCCCCCT--------TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred hCCCCEEEECCCCCCCC--------CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 47889999999873221 111112 2234567777788888899988887754
No 154
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=47.20 E-value=34 Score=27.57 Aligned_cols=51 Identities=22% Similarity=0.134 Sum_probs=32.6
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH---HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY---KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~---~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-.. .....+.+ ..-++++++.+.+..|++.+++++.|
T Consensus 74 ~~~aDvVii~ag~~~k~--------g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 127 (326)
T 2zqz_A 74 AKDADLVVITAGAPQKP--------GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp GGGCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred hCCCCEEEEcCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 46789999999864321 11112222 24567777888888899988887655
No 155
>3e59_A Pyoverdine biosynthesis protein PVCA; isonitrIle, paerucumarin, 2-isocyano-6,7-dihydroxycoum transferase; HET: PGE; 2.10A {Pseudomonas aeruginosa}
Probab=46.79 E-value=25 Score=28.45 Aligned_cols=64 Identities=13% Similarity=0.112 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHhhC-CCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeech
Q 026021 101 EYKHNLHSIVSFLKNRW-PNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLW 177 (244)
Q Consensus 101 ~~~~~l~~~v~~~~~~~-p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~ 177 (244)
--...|..+++.+++-+ |+++|.+++=-.+ ... +..-..+.+..|.+.+++++.+.+..-|+++
T Consensus 88 lAL~~Ln~lc~~I~~vY~PGa~v~IiSDG~V----fnD---------ligV~D~~v~~Yg~~Lr~m~~~~g~~~I~f~ 152 (330)
T 3e59_A 88 LSLSFLNHLCQRIQLFYAPGAKITVCSDGRV----FGD---------LVRIGDAHISAYQDALRLMIEEIGATHIGVF 152 (330)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEECCCHHH----HGG---------GTTCCHHHHHHHHHHHHHHHHHHTCSSEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEecCCce----ecc---------ccCCCHHHHHHHHHHHHHHHHhcCCCceeee
Confidence 34568888899998875 8888888875211 111 1123346788999999999999876555443
No 156
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=46.18 E-value=1e+02 Score=24.03 Aligned_cols=70 Identities=14% Similarity=0.071 Sum_probs=43.7
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
.+-+++.|++|.+. ++++.. .-|+..+|.+|-++.... ...+.++..+...++++.
T Consensus 23 ~IgvfDSGvGGltv------~~~i~~------------~lP~~~~iy~~D~~~~Py------G~~s~~~i~~~~~~i~~~ 78 (285)
T 2jfn_A 23 TVLVFDSGVGGLSV------YDEIRH------------LLPDLHYIYAFDNVAFPY------GEKSEAFIVERVVAIVTA 78 (285)
T ss_dssp EEEEEESSSTHHHH------HHHHHH------------HSTTSEEEEEECTTTCCT------TTSCHHHHHHHHHHHHHH
T ss_pred cEEEEeCCccHHHH------HHHHHH------------hCCCCCeEEeeccCCCCC------ccCCHHHHHHHHHHHHHH
Confidence 37788888888443 333333 334555677775554321 234677888888888887
Q ss_pred HHhhCCCceEEEEcC
Q 026021 113 LKNRWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~~~p~~~vil~~~ 127 (244)
+.++. +++.+++..
T Consensus 79 ll~~~-g~d~IviaC 92 (285)
T 2jfn_A 79 VQERY-PLALAVVAC 92 (285)
T ss_dssp HHHHS-CCSEEEECC
T ss_pred HHHhC-CCCEEEEEC
Confidence 76532 466777776
No 157
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=45.92 E-value=1e+02 Score=23.88 Aligned_cols=69 Identities=14% Similarity=0.262 Sum_probs=44.7
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
++.++..|++|.+. +..+.. .-|+.-++.+|-++.... ...+.++..+.+.++++.
T Consensus 5 ~IgvfDSGvGGltv------~~~i~~------------~lP~~~~iy~~D~~~~Py------G~~s~~~i~~~~~~~~~~ 60 (272)
T 1zuw_A 5 PIGVIDSGVGGLTV------AKEIMR------------QLPKENIIYVGDTKRCPY------GPRPEEEVLQYTWELTNY 60 (272)
T ss_dssp CEEEEESSSTTHHH------HHHHHH------------HSTTCCEEEEECGGGCCC------SSSCHHHHHHHHHHHHHH
T ss_pred eEEEEeCCcchHHH------HHHHHH------------hCCCCcEEEeccCCCCCC------CCCCHHHHHHHHHHHHHH
Confidence 36788889998544 232222 334444668886665432 234678888888889998
Q ss_pred HHh-hCCCceEEEEcC
Q 026021 113 LKN-RWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~-~~p~~~vil~~~ 127 (244)
+.+ .+ ++.+++..
T Consensus 61 L~~~~g--~d~iViAC 74 (272)
T 1zuw_A 61 LLENHH--IKMLVIAC 74 (272)
T ss_dssp HHHHSC--CSEEEECC
T ss_pred HHhhcC--CCEEEEeC
Confidence 888 64 56777766
No 158
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=45.07 E-value=80 Score=25.66 Aligned_cols=40 Identities=5% Similarity=-0.000 Sum_probs=23.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
.+||+|++-+..-+. +- -++++.+++..|.++|++++...
T Consensus 48 ~~~dlvllD~~mp~~------------~G-------~~~~~~lr~~~~~~pii~lt~~~ 87 (394)
T 3eq2_A 48 EQPDLVICDLRMPQI------------DG-------LELIRRIRQTASETPIIVLSGAG 87 (394)
T ss_dssp SCCSEEEECCCSSSS------------CT-------HHHHHHHHHTTCCCCEEEC---C
T ss_pred CCCCEEEEcCCCCCC------------CH-------HHHHHHHHhhCCCCcEEEEEcCC
Confidence 679999885533222 11 24566667777888899988753
No 159
>3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum}
Probab=44.88 E-value=16 Score=31.51 Aligned_cols=83 Identities=10% Similarity=-0.005 Sum_probs=50.8
Q ss_pred cccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCee
Q 026021 95 QHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVV 174 (244)
Q Consensus 95 ~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~i 174 (244)
...+.++|.+.+.+..+.+|+..|. +-+++|...+......|.....-........-.+.-|-+.+++..++.++.++
T Consensus 194 ~~~t~eEY~~~~~~~AkAmK~vDP~--ikl~GPa~~g~~~y~~~~~~~~w~~~~g~~~W~l~~~L~~mk~~~~~~g~RLL 271 (517)
T 3ik2_A 194 DKTKCSEVLDKDTQLAQVVKKIDPA--AETFGPALFGFSAFNDFNSSPDWSSVKGNYQWFIDYYLDNMKKNSDAAGKRLL 271 (517)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHCTT--CEEEEEEECSHHHHHHTTTCTTHHHHHTTCSSHHHHHHHHHHHHHHHHTSCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhhCCC--cEEEcchhhccccccccccccccccccCCcchHHHHHHHHHHHhhccCCcccc
Confidence 4568999999999999999999887 66666666655544332211100000000001355667777777778888777
Q ss_pred echhH
Q 026021 175 DLWTK 179 (244)
Q Consensus 175 D~~~~ 179 (244)
|+...
T Consensus 272 D~ldi 276 (517)
T 3ik2_A 272 DALDL 276 (517)
T ss_dssp SEEEE
T ss_pred ceeee
Confidence 76543
No 160
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=44.84 E-value=55 Score=20.43 Aligned_cols=40 Identities=15% Similarity=0.316 Sum_probs=25.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~ 129 (244)
..||+|++-+...+. + -.++++.+++.. +.+++++++...
T Consensus 44 ~~~dlii~d~~~~~~------------~-------~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 44 LQPIVILMAWPPPDQ------------S-------CLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp HCCSEEEEECSTTCC------------T-------HHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred cCCCEEEEecCCCCC------------C-------HHHHHHHHHhccccCCCCEEEEeCCC
Confidence 578999987654332 1 124566666664 677888887643
No 161
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=44.80 E-value=70 Score=21.64 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=25.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~~ 129 (244)
.+||+|++-+...|.. . -++++.+++. .+.++|++++...
T Consensus 50 ~~~dlii~D~~l~~~~------------g-------~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMD------------G-------YALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp CCCSEEEEESCCSSSC------------H-------HHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred CCCCEEEEeCCCCCCC------------H-------HHHHHHHHhCCCcCCCCEEEEECCC
Confidence 7899999987544431 1 2455566654 3678888888643
No 162
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=44.62 E-value=86 Score=22.63 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=29.2
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
...|.||.+.|.... ...........+++.+++.. ..++++++..
T Consensus 60 ~~~d~vi~~ag~~~~------------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~ 104 (221)
T 3ew7_A 60 SDQNVVVDAYGISPD------------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGA 104 (221)
T ss_dssp TTCSEEEECCCSSTT------------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCC
T ss_pred cCCCEEEECCcCCcc------------ccchHHHHHHHHHHHHHhcC-CceEEEEecc
Confidence 568999999887432 12234556777888888764 3467776653
No 163
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=44.53 E-value=63 Score=21.00 Aligned_cols=22 Identities=14% Similarity=0.350 Sum_probs=14.7
Q ss_pred HHHHHHHhh--CCCceEEEEcCCC
Q 026021 108 SIVSFLKNR--WPNTLVLLITPPP 129 (244)
Q Consensus 108 ~~v~~~~~~--~p~~~vil~~~~~ 129 (244)
++++.+++. .+.++|++++...
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCC
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCC
Confidence 456666663 4678899888743
No 164
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=44.40 E-value=44 Score=26.50 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=34.7
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+|||..|..=- +...+.+-+. +-++++++.+.+..|++.+++++.|
T Consensus 67 ~~~aDvVvitAG~prk--------pGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP 120 (294)
T 2x0j_A 67 LKGSEIIVVTAGLARK--------PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp GTTCSEEEECCCCCCC--------SSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred hCCCCEEEEecCCCCC--------CCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence 4678999999884321 1233444444 3557788888888999987777766
No 165
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=44.06 E-value=92 Score=25.50 Aligned_cols=41 Identities=24% Similarity=0.170 Sum_probs=27.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|.. - -++++.+++..|.++|++++...-
T Consensus 43 ~~~DlvllD~~mp~~d------------G-------~ell~~lr~~~~~~pvIvlT~~~~ 83 (387)
T 1ny5_A 43 KHFNVVLLDLLLPDVN------------G-------LEILKWIKERSPETEVIVITGHGT 83 (387)
T ss_dssp SCCSEEEEESBCSSSB------------H-------HHHHHHHHHHCTTSEEEEEEETTC
T ss_pred CCCCEEEEeCCCCCCC------------H-------HHHHHHHHhhCCCCcEEEEeCCCC
Confidence 6799999876543331 1 245666777778888999987543
No 166
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=43.75 E-value=38 Score=24.36 Aligned_cols=65 Identities=12% Similarity=-0.055 Sum_probs=38.8
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhc-cccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFS-RTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~-~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
-|+.+||.+. ...+.=...|.+.+. ..+.+...++-+.....+...+.+... ....|+||..-|+
T Consensus 14 ~Ii~tGdE~g---~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~-----------~~~~DlVittGG~ 79 (172)
T 1mkz_A 14 AILTVSNRRG---EEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIA-----------SDDVQVVLITGGT 79 (172)
T ss_dssp EEEEECSSCC---GGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHH-----------SSSCCEEEEESCC
T ss_pred EEEEEeCCCC---cccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHh-----------cCCCCEEEeCCCC
Confidence 4788999953 212222223333331 126677777778777766666666555 2368999887654
No 167
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=43.60 E-value=67 Score=21.08 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=26.4
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEc-CC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLIT-PP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~-~~ 128 (244)
..||+|++-+...+. +. -++++.+++..+.++|++++ ..
T Consensus 59 ~~~dlvilD~~l~~~------------~g-------~~~~~~l~~~~~~~~ii~ls~~~ 98 (138)
T 2b4a_A 59 STCDLLIVSDQLVDL------------SI-------FSLLDIVKEQTKQPSVLILTTGR 98 (138)
T ss_dssp GSCSEEEEETTCTTS------------CH-------HHHHHHHTTSSSCCEEEEEESCC
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHHhhCCCCCEEEEECCC
Confidence 578999887644332 11 24667777777888999998 54
No 168
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=43.40 E-value=76 Score=21.66 Aligned_cols=62 Identities=10% Similarity=-0.089 Sum_probs=39.3
Q ss_pred cceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHH
Q 026021 34 VDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFL 113 (244)
Q Consensus 34 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 113 (244)
+++++.|.. .+... +.+... ..++|+|.++.- ...+...+.++++.+
T Consensus 32 ~~Vi~lG~~-~p~e~----~v~~a~-----------~~~~d~v~lS~~-----------------~~~~~~~~~~~i~~l 78 (137)
T 1ccw_A 32 FNVVNIGVL-SPQEL----FIKAAI-----------ETKADAILVSSL-----------------YGQGEIDCKGLRQKC 78 (137)
T ss_dssp CEEEEEEEE-ECHHH----HHHHHH-----------HHTCSEEEEEEC-----------------SSTHHHHHTTHHHHH
T ss_pred CEEEECCCC-CCHHH----HHHHHH-----------hcCCCEEEEEec-----------------CcCcHHHHHHHHHHH
Confidence 889988873 22222 222222 378999988863 123356778888888
Q ss_pred HhhCC-CceEEEEcCC
Q 026021 114 KNRWP-NTLVLLITPP 128 (244)
Q Consensus 114 ~~~~p-~~~vil~~~~ 128 (244)
++.++ +.+|++-+.+
T Consensus 79 ~~~g~~~i~v~vGG~~ 94 (137)
T 1ccw_A 79 DEAGLEGILLYVGGNI 94 (137)
T ss_dssp HHTTCTTCEEEEEESC
T ss_pred HhcCCCCCEEEEECCC
Confidence 88764 5777666654
No 169
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=42.85 E-value=70 Score=21.07 Aligned_cols=40 Identities=8% Similarity=0.038 Sum_probs=26.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. + --++++.+++.. +.++|++++...
T Consensus 58 ~~~dlii~D~~l~~~------------~-------g~~~~~~l~~~~~~~~~~ii~ls~~~ 99 (143)
T 2qvg_A 58 IHPKLILLDINIPKM------------N-------GIEFLKELRDDSSFTDIEVFVLTAAY 99 (143)
T ss_dssp CCCSEEEEETTCTTS------------C-------HHHHHHHHTTSGGGTTCEEEEEESCC
T ss_pred CCCCEEEEecCCCCC------------C-------HHHHHHHHHcCccccCCcEEEEeCCC
Confidence 679999987643332 1 125666777654 678888887743
No 170
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ...
Probab=42.57 E-value=1.6e+02 Score=25.16 Aligned_cols=146 Identities=11% Similarity=0.002 Sum_probs=73.8
Q ss_pred cCCccEEEEEeccCCCCCCCCC--CCC-----cccChhHHH-HHHHHHHHHHHhhC-CCceEEEE--cCCCCChhhhhcC
Q 026021 70 RVSTIAVAVFFGANDACLPDRC--GAF-----QHVPLHEYK-HNLHSIVSFLKNRW-PNTLVLLI--TPPPIDEEARLKH 138 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~--~~~-----~~~~~~~~~-~~l~~~v~~~~~~~-p~~~vil~--~~~~~~~~~~~~~ 138 (244)
.....++=+.+|+.|....... +.. ...+.+.=. .....+++++++.+ |+.+|+.. ++|.. ......
T Consensus 113 Glglsi~R~~IG~~d~s~~~ysy~d~~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~aspWSpP~w--Mk~n~~ 190 (497)
T 2nt0_A 113 GIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTW--LKTNGA 190 (497)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGG--GBTTCS
T ss_pred CCceEEEEEeecCCCCCCCCccccCCCCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEecCCCcHH--HhcCCC
Confidence 3678888899999987532111 100 111222212 35677888888885 77777766 33322 211111
Q ss_pred CC-CCCCCCC-CccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhhh-cccccccccccCChhHHHHHHH-HHHHHHh
Q 026021 139 PY-VENPTGL-PERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLAD-WKTAYLSDGLHLNETGNRVVFE-EVVMKLK 214 (244)
Q Consensus 139 ~~-~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~-~~~~~~~DgiHpn~~G~~~~a~-~l~~~l~ 214 (244)
.. +..+... .....+..+.|-....+..+++|+++ +.-.+.++... +.......+.|.+++-.+.+.+ .|.+.|+
T Consensus 191 ~~ggG~L~~~~~~~~y~~yA~Ylvk~i~~y~~~Gi~i-~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L~ 269 (497)
T 2nt0_A 191 VNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQF-WAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLA 269 (497)
T ss_dssp SSSSCBBSSCTTSHHHHHHHHHHHHHHHHHHHTTCCC-SEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHH
T ss_pred cCCCCccCCccchhHHHHHHHHHHHHHHHHHHcCCCe-eEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 11 1111000 00123333333333334445568763 33233333221 1011246789999998877655 8888998
Q ss_pred hcCC
Q 026021 215 TEGL 218 (244)
Q Consensus 215 ~~~~ 218 (244)
+.++
T Consensus 270 ~~gl 273 (497)
T 2nt0_A 270 NSTH 273 (497)
T ss_dssp TSTT
T ss_pred hcCC
Confidence 8765
No 171
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=42.16 E-value=42 Score=20.79 Aligned_cols=46 Identities=15% Similarity=0.184 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeech
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLW 177 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~ 177 (244)
.+++.++.+++. +++++++..- .-..+...+..+|.+++++++...
T Consensus 15 G~~~v~kai~~g--kaklViiA~D-------------------------~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 15 GTKQTVKALKRG--SVKEVVVAKD-------------------------ADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp SHHHHHHHHTTT--CEEEEEEETT-------------------------SCHHHHHHHHHHHHHHTCCEEEES
T ss_pred cHHHHHHHHHcC--CeeEEEEeCC-------------------------CCHHHHHHHHHHHHHcCCCEEEEC
Confidence 356667777764 6778888760 111355677888999999998765
No 172
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=41.58 E-value=61 Score=23.44 Aligned_cols=67 Identities=7% Similarity=-0.059 Sum_probs=40.1
Q ss_pred eEEEEccccc----ccccCCCChHHHHHHhhc-cccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEE
Q 026021 4 KIYLFGDSIT----ESSFTYGGWGASLAHHFS-RTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAV 78 (244)
Q Consensus 4 ~il~iGDSit----~~g~~~~~~~~~l~~~~~-~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii 78 (244)
-|+.+||++. ..|...+.=...|.+.+. ..+.+...++-......+...+.+... ....|+||+
T Consensus 19 ~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~-----------~~~~DlVit 87 (178)
T 2pjk_A 19 YVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALS-----------IDEVDVIIS 87 (178)
T ss_dssp EEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHT-----------CTTCCEEEE
T ss_pred EEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHh-----------cCCCCEEEE
Confidence 4889999876 213322322233333331 126677788888777766666666555 235899988
Q ss_pred Eec
Q 026021 79 FFG 81 (244)
Q Consensus 79 ~~G 81 (244)
.-|
T Consensus 88 tGG 90 (178)
T 2pjk_A 88 TGG 90 (178)
T ss_dssp ESC
T ss_pred CCC
Confidence 755
No 173
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=41.37 E-value=81 Score=25.42 Aligned_cols=54 Identities=9% Similarity=-0.031 Sum_probs=33.6
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCc-eEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNT-LVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~-~vil~~~~ 128 (244)
....|+||+..|.... + +..+..-.+.-..-++.+++.+++..|+. .+++++.|
T Consensus 77 ~~daDvVvitAg~prk--p---G~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 77 FKDLDVAILVGSMPRR--D---GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp TTTCSEEEECCSCCCC--T---TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hCCCCEEEEeCCCCCC--C---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 4678999998775432 1 11111113334456788888999988876 57777654
No 174
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=40.85 E-value=68 Score=20.34 Aligned_cols=22 Identities=23% Similarity=0.370 Sum_probs=15.2
Q ss_pred HHHHHHhhCCCceEEEEcCCCC
Q 026021 109 IVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 109 ~v~~~~~~~p~~~vil~~~~~~ 130 (244)
+++.+++..|.+++++++...-
T Consensus 65 ~~~~l~~~~~~~~ii~~s~~~~ 86 (124)
T 1dc7_A 65 LLKQIKQRHPMLPVIIMTAHSD 86 (124)
T ss_dssp THHHHHHHCTTSCCCCBCCSTT
T ss_pred HHHHHHhhCCCCCEEEEecCCC
Confidence 4566666677888888876543
No 175
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=40.55 E-value=68 Score=20.26 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=23.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+...+. +. -++++.+++ .+.+++++++...
T Consensus 44 ~~~dlvi~D~~l~~~------------~g-------~~~~~~l~~-~~~~~ii~~s~~~ 82 (121)
T 1zh2_A 44 RKPDLIILDLGLPDG------------DG-------IEFIRDLRQ-WSAVPVIVLSARS 82 (121)
T ss_dssp HCCSEEEEESEETTE------------EH-------HHHHHHHHT-TCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCC------------cH-------HHHHHHHHh-CCCCcEEEEECCC
Confidence 578999886543322 01 134555553 4677788887643
No 176
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=40.36 E-value=75 Score=25.28 Aligned_cols=54 Identities=20% Similarity=0.087 Sum_probs=33.0
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|..-.. . .....-...-..-++++++.+.+..|++.+++++.|
T Consensus 72 l~~aDvViia~~~~~~~--g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNP 125 (316)
T 1ldn_A 72 CRDADLVVICAGANQKP--G---ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNP 125 (316)
T ss_dssp TTTCSEEEECCSCCCCT--T---TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred hCCCCEEEEcCCCCCCC--C---CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 46789999999864321 0 011101222234567777788888899887777654
No 177
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=40.19 E-value=23 Score=28.87 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=25.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR 116 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~ 116 (244)
..+||+|+++.|. |....+.. ....++.+.|.. +.+.+++.
T Consensus 271 ~f~Pd~ivvsaG~-D~~~~Dpl-g~~~lt~~~~~~----~~~~l~~~ 311 (341)
T 3q9b_A 271 AFGAEAIVVSLGV-DTFEQDPI-SFFKLTSPDYIT----MGRTIAAS 311 (341)
T ss_dssp HHTCSCEEEEECC-TTBTTCTT-CCCBBCTTHHHH----HHHHHHTT
T ss_pred hhCCCEEEEeCCc-cccCCCCC-CCccCCHHHHHH----HHHHHHHh
Confidence 4899999999998 55433311 123456666665 55555554
No 178
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=40.15 E-value=1.1e+02 Score=23.81 Aligned_cols=81 Identities=16% Similarity=0.066 Sum_probs=42.3
Q ss_pred CeEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEec
Q 026021 3 PKIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFG 81 (244)
Q Consensus 3 ~~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G 81 (244)
.+|+++-|+-. ....+...+.. ++.+.-.+.+| .+.++.... .+||+|++-+-
T Consensus 161 ~rILvVdD~~~--------~~~~l~~~L~~~g~~v~~~a~~g------~eAl~~~~~------------~~~dlvl~D~~ 214 (286)
T 3n0r_A 161 TEVLIIEDEPV--------IAADIEALVRELGHDVTDIAATR------GEALEAVTR------------RTPGLVLADIQ 214 (286)
T ss_dssp CEEEEECCSHH--------HHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHH------------CCCSEEEEESC
T ss_pred CcEEEEcCCHH--------HHHHHHHHhhccCceEEEEeCCH------HHHHHHHHh------------CCCCEEEEcCC
Confidence 47899999877 22334444422 24444234444 222332222 67999988764
Q ss_pred cCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 82 ANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 82 ~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
.-|-+. -- ++++.+|+.. .++||++|..
T Consensus 215 MPd~md-----------G~-------e~~~~ir~~~-~~piI~lT~~ 242 (286)
T 3n0r_A 215 LADGSS-----------GI-------DAVKDILGRM-DVPVIFITAF 242 (286)
T ss_dssp CTTSCC-----------TT-------TTTHHHHHHT-TCCEEEEESC
T ss_pred CCCCCC-----------HH-------HHHHHHHhcC-CCCEEEEeCC
Confidence 432111 00 2234444443 6779999885
No 179
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=39.78 E-value=75 Score=20.53 Aligned_cols=38 Identities=5% Similarity=0.059 Sum_probs=23.3
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITP 127 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~ 127 (244)
..||+|++-+...|.. -.++++.+++.. +...|++++.
T Consensus 49 ~~~dlii~d~~l~~~~-------------------g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLD-------------------GLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp TCCSEEEEESCBTTBC-------------------HHHHHHHHHTTTCSSCCEEEEECC
T ss_pred cCCCEEEEecCCCCCC-------------------HHHHHHHHHhcCccCCCeEEEEeC
Confidence 7899999876544431 135666777764 3455665554
No 180
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=38.95 E-value=82 Score=20.76 Aligned_cols=40 Identities=5% Similarity=-0.092 Sum_probs=24.6
Q ss_pred CCccEEEEEeccCC-CCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGAND-ACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND-~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-| . +. .++++.+++. |.++|++++...-
T Consensus 49 ~~~dlvi~D~~l~~~~------------~g-------~~~~~~l~~~-~~~~ii~ls~~~~ 89 (140)
T 3h5i_A 49 WYPDLILMDIELGEGM------------DG-------VQTALAIQQI-SELPVVFLTAHTE 89 (140)
T ss_dssp CCCSEEEEESSCSSSC------------CH-------HHHHHHHHHH-CCCCEEEEESSSS
T ss_pred CCCCEEEEeccCCCCC------------CH-------HHHHHHHHhC-CCCCEEEEECCCC
Confidence 68999999875432 2 11 2344444544 6788888887543
No 181
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=38.66 E-value=26 Score=28.99 Aligned_cols=50 Identities=18% Similarity=0.204 Sum_probs=29.8
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
..+||+||++.|. |....+.- ....++.+.|.. +++.+++. +.+++++.-
T Consensus 246 ~f~Pd~IvvsaG~-Da~~~DpL-g~l~Lt~~g~~~----~~~~l~~~--~~p~v~v~e 295 (376)
T 4a69_A 246 FYQPTCIVLQCGA-DSLGCDRL-GCFNLSIRGHGE----CVEYVKSF--NIPLLVLGG 295 (376)
T ss_dssp HHCCSEEEEECCG-GGBTTCSS-CCCBBCHHHHHH----HHHHHHTT--CCCEEEECC
T ss_pred HhCCCEEEEeCcc-cCCCCCcc-cCeecCHHHHHH----HHHHHHHc--CCCEEEEEC
Confidence 4899999999998 54333211 123556666654 45556655 344665543
No 182
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=38.65 E-value=75 Score=25.13 Aligned_cols=52 Identities=8% Similarity=0.079 Sum_probs=33.1
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH---HHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY---KHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~---~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
....|+||+.+|+.-.. .....+-+ ..-++++++.+.+..|++.+++++.|.
T Consensus 67 l~~aDvViiav~~p~~~--------g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TANSDIVIITAGLPRKP--------GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTTCSEEEECCSCCCCT--------TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCCCCEEEEeCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 46789999999853210 11122222 245677777887778898888886653
No 183
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=38.25 E-value=76 Score=20.17 Aligned_cols=38 Identities=11% Similarity=0.041 Sum_probs=22.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
.+||+|++-+..-+. +. -++++.+++. +.+++++++..
T Consensus 46 ~~~dlvi~D~~l~~~------------~g-------~~~~~~l~~~-~~~~ii~~s~~ 83 (123)
T 1xhf_A 46 YDINLVIMDINLPGK------------NG-------LLLARELREQ-ANVALMFLTGR 83 (123)
T ss_dssp SCCSEEEECSSCSSS------------CH-------HHHHHHHHHH-CCCEEEEEESC
T ss_pred CCCCEEEEcCCCCCC------------CH-------HHHHHHHHhC-CCCcEEEEECC
Confidence 678999886543222 11 1345555555 57788888764
No 184
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=38.10 E-value=1.2e+02 Score=22.41 Aligned_cols=17 Identities=12% Similarity=0.061 Sum_probs=12.3
Q ss_pred HHHHHHHHhcCCCeeec
Q 026021 160 KACIEVAGECGLPVVDL 176 (244)
Q Consensus 160 ~~~~~~a~~~~v~~iD~ 176 (244)
+...++|++.++.|+.+
T Consensus 139 ~e~~~~a~~~~~~~~e~ 155 (216)
T 4dkx_A 139 EEGERKAKELNVMFIET 155 (216)
T ss_dssp HHHHHHHHHHTCEEEEE
T ss_pred HHHhhHHHHhCCeeEEE
Confidence 34567788888888765
No 185
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A
Probab=37.98 E-value=81 Score=27.18 Aligned_cols=54 Identities=13% Similarity=0.034 Sum_probs=39.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
+....+=.+.+| |...-.. .....+.++|.+.++++.+.+|+..|+.+++.++.
T Consensus 179 ~~P~~vkyweiG-NE~~G~~---q~G~~t~e~Y~~~~~~~a~Aik~~dP~I~lia~G~ 232 (504)
T 3ug3_A 179 PEPYNVKFWGIG-NEMYGEW---QVGHMTADEYARAAKEYTKWMKVFDPTIKAIAVGC 232 (504)
T ss_dssp CSCCCCCEEEEC-SSTTSTT---STTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCC
T ss_pred CCCCCccEEEec-Ccccccc---cccCCCHHHHHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 344577788888 6653211 11345789999999999999999999987777654
No 186
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=37.83 E-value=34 Score=28.41 Aligned_cols=49 Identities=14% Similarity=0.153 Sum_probs=28.6
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEc
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLIT 126 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~ 126 (244)
..+||+||++.|. |....+.- ....++.+.|... ++.+++. +.+++++.
T Consensus 254 ~F~PdlIvvsaG~-Da~~~DpL-g~l~lt~~g~~~~----~~~l~~~--~~p~l~~~ 302 (388)
T 3ew8_A 254 AFNPKAVVLQLGA-DTIAGDPM-CSFNMTPVGIGKC----LKYILQW--QLATLILG 302 (388)
T ss_dssp HHCCSEEEEECCS-TTBTTCTT-CCCCBCHHHHHHH----HHHHHTT--CCEEEEEC
T ss_pred HhCCCEEEEECCc-cCCCCCCC-CCCcCCHHHHHHH----HHHHHhc--CCCEEEEE
Confidence 4899999999998 55433311 1234566666544 4444543 33455554
No 187
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=37.81 E-value=26 Score=28.84 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=29.9
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
..+||+||++.|. |....+.- .....+.+.|.. +++.+++. +.+++++.-
T Consensus 245 ~f~Pd~ivvsaG~-D~~~~Dpl-g~~~lt~~g~~~----~~~~~~~~--~~p~v~~~e 294 (367)
T 3max_A 245 MYQPSAVVLQCGA-DSLSGDRL-GCFNLTVKGHAK----CVEVVKTF--NLPLLMLGG 294 (367)
T ss_dssp HHCCSEEEEECCG-GGBTTCSS-CCCCBCHHHHHH----HHHHHHTT--CCCEEEECC
T ss_pred HhCCCEEEEECCc-cCcCCCCC-CCeeeCHHHHHH----HHHHHHhc--CCCEEEEeC
Confidence 4899999999998 55433311 123456666654 55566665 344665544
No 188
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=37.73 E-value=1.3e+02 Score=22.66 Aligned_cols=42 Identities=7% Similarity=-0.128 Sum_probs=26.1
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPID 131 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~ 131 (244)
..||+|++-+..-+.. - -++++.+++..+.++|++++.....
T Consensus 172 ~~~dlvl~D~~mp~~~------------G-------~~l~~~ir~~~~~~piI~lt~~~~~ 213 (254)
T 2ayx_A 172 NHIDIVLSDVNMPNMD------------G-------YRLTQRIRQLGLTLPVIGVTANALA 213 (254)
T ss_dssp SCCSEEEEEESSCSSC------------C-------HHHHHHHHHHHCCSCEEEEESSTTS
T ss_pred CCCCEEEEcCCCCCCC------------H-------HHHHHHHHhcCCCCcEEEEECCCCH
Confidence 6799999877543331 1 1344555555567889998875443
No 189
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=37.43 E-value=1.5e+02 Score=23.20 Aligned_cols=69 Identities=20% Similarity=0.236 Sum_probs=42.4
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
.+.++..|++|.+. ...+.+.. |...++.+|-++.... ...+.++..+.+.++++.
T Consensus 24 ~IGvfDsG~Ggltv---~~~i~~~~---------------P~~~~iy~~D~~~~Py------g~~s~~~i~~~~~~~~~~ 79 (286)
T 2jfq_A 24 PIGVIDSGVGGLTV---AKEIMRQL---------------PNETIYYLGDIGRCPY------GPRPGEQVKQYTVEIARK 79 (286)
T ss_dssp CEEEEESSSTTHHH---HHHHHHHC---------------TTCCEEEEECTTTCCC------TTSCHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCCcHHH---HHHHHHHC---------------CCccEEEeccCCCCCc------CCCCHHHHHHHHHHHHHH
Confidence 47788888886433 22333322 2333567775554321 234577788888888888
Q ss_pred HHhhCCCceEEEEcC
Q 026021 113 LKNRWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~~~p~~~vil~~~ 127 (244)
+.+. +++.+++..
T Consensus 80 L~~~--g~d~IVIaC 92 (286)
T 2jfq_A 80 LMEF--DIKMLVIAC 92 (286)
T ss_dssp HTTS--CCSEEEECC
T ss_pred HHHC--CCCEEEEeC
Confidence 8876 466777766
No 190
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=37.41 E-value=1.3e+02 Score=22.46 Aligned_cols=62 Identities=8% Similarity=-0.042 Sum_probs=39.8
Q ss_pred cceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEE--EeccCCCCCCCCCCCCcccChhHHHHHHHHHHH
Q 026021 34 VDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAV--FFGANDACLPDRCGAFQHVPLHEYKHNLHSIVS 111 (244)
Q Consensus 34 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii--~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~ 111 (244)
+++++.|..- +... +.+... ..+||+|.+ +.- .......++++++
T Consensus 121 ~~Vi~LG~~v-p~e~----iv~~~~-----------~~~~d~v~l~~S~l-----------------~~~~~~~~~~~i~ 167 (215)
T 3ezx_A 121 FQIVDLGVDV-LNEN----VVEEAA-----------KHKGEKVLLVGSAL-----------------MTTSMLGQKDLMD 167 (215)
T ss_dssp CEEEECCSSC-CHHH----HHHHHH-----------HTTTSCEEEEEECS-----------------SHHHHTHHHHHHH
T ss_pred CeEEEcCCCC-CHHH----HHHHHH-----------HcCCCEEEEEchhc-----------------ccCcHHHHHHHHH
Confidence 8888888754 2222 222222 388999988 531 2234567899999
Q ss_pred HHHhhCC--CceEEEEcCC
Q 026021 112 FLKNRWP--NTLVLLITPP 128 (244)
Q Consensus 112 ~~~~~~p--~~~vil~~~~ 128 (244)
.+++.++ +++|++-+.+
T Consensus 168 ~l~~~~~~~~v~v~vGG~~ 186 (215)
T 3ezx_A 168 RLNEEKLRDSVKCMFGGAP 186 (215)
T ss_dssp HHHHTTCGGGSEEEEESSS
T ss_pred HHHHcCCCCCCEEEEECCC
Confidence 9999875 6676666654
No 191
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=37.39 E-value=63 Score=24.63 Aligned_cols=12 Identities=42% Similarity=0.659 Sum_probs=10.1
Q ss_pred CCeEEEEccccc
Q 026021 2 RPKIYLFGDSIT 13 (244)
Q Consensus 2 ~~~il~iGDSit 13 (244)
+++|+++-|+-.
T Consensus 4 ~~~ILiVdD~~~ 15 (259)
T 3luf_A 4 KQKILIVEDSMT 15 (259)
T ss_dssp CCEEEEECCCHH
T ss_pred CCeEEEEECCHH
Confidence 458999999977
No 192
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=37.19 E-value=1.1e+02 Score=24.11 Aligned_cols=54 Identities=7% Similarity=0.092 Sum_probs=36.4
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEc
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLIT 126 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~ 126 (244)
...||+|++..|..--... +....++.++..+.++++++.+++.+|++.|+.-.
T Consensus 181 ~agpDiI~~h~glT~gglI---G~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~g 234 (286)
T 2p10_A 181 KAGADILVCHMGLTTGGAI---GARSGKSMDDCVSLINECIEAARTIRDDIIILSHG 234 (286)
T ss_dssp HHTCSEEEEECSCC------------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEES
T ss_pred HcCCCEEEECCCCCCCCcc---cCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 4789999999985432211 12345678888999999999999999986444444
No 193
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=37.04 E-value=1.2e+02 Score=22.20 Aligned_cols=41 Identities=15% Similarity=-0.018 Sum_probs=28.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhC--CCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRW--PNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~ 128 (244)
.+||+|.++.- + ......++++++.+++.+ |+++|++.+.+
T Consensus 138 ~~~d~v~lS~~-~----------------~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 138 YQPDIVGMSAL-L----------------TTTMMNMKSTIDALIAAGLRDRVKVIVGGAP 180 (210)
T ss_dssp HCCSEEEEECC-S----------------GGGTHHHHHHHHHHHHTTCGGGCEEEEESTT
T ss_pred cCCCEEEEecc-c----------------cccHHHHHHHHHHHHhcCCCCCCeEEEECCC
Confidence 78999988853 1 112567888999998875 45777777664
No 194
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=37.02 E-value=1.1e+02 Score=24.93 Aligned_cols=42 Identities=17% Similarity=0.160 Sum_probs=27.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPID 131 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~ 131 (244)
..||+|++-+..-|.. - -++++.+++..|.++|++++.....
T Consensus 43 ~~~DlvllDi~mP~~d------------G-------~ell~~lr~~~~~~pvI~lT~~~~~ 84 (368)
T 3dzd_A 43 LFFPVIVLDVWMPDGD------------G-------VNFIDFIKENSPDSVVIVITGHGSV 84 (368)
T ss_dssp BCCSEEEEESEETTEE------------T-------TTHHHHHHHHCTTCEEEEEECSSCC
T ss_pred CCCCEEEEeCCCCCCC------------H-------HHHHHHHHhhCCCCeEEEEeCCCCH
Confidence 7799998865443321 0 1355666777788899999876543
No 195
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=36.81 E-value=87 Score=20.44 Aligned_cols=21 Identities=33% Similarity=0.494 Sum_probs=14.4
Q ss_pred HHHHHHHhhCC-CceEEEEcCCC
Q 026021 108 SIVSFLKNRWP-NTLVLLITPPP 129 (244)
Q Consensus 108 ~~v~~~~~~~p-~~~vil~~~~~ 129 (244)
++++.+++. + .++|++++...
T Consensus 75 ~~~~~l~~~-~~~~~ii~ls~~~ 96 (137)
T 2pln_A 75 SFVSRIKEK-HSSIVVLVSSDNP 96 (137)
T ss_dssp HHHHHHHHH-STTSEEEEEESSC
T ss_pred HHHHHHHhc-CCCccEEEEeCCC
Confidence 455666666 6 78899888743
No 196
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum}
Probab=35.79 E-value=1e+02 Score=27.08 Aligned_cols=54 Identities=13% Similarity=0.064 Sum_probs=39.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....+-.+.+| |...-. ......+.++|.+.++++.+.+|+..|+.+|+.+++.
T Consensus 203 ep~~vkyweIG-NE~~g~---W~~G~~t~e~Y~~~~~~~a~AiK~vdP~i~via~G~~ 256 (574)
T 2y2w_A 203 EPMDIKMWCIG-NEMDGP---WQVGHMSPEEYAGAVDKVAHAMKLAESGLELVACGSS 256 (574)
T ss_dssp SCCCCCEEEES-SCTTST---TSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECCS
T ss_pred CCcceeEEEec-cccccc---cccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecCC
Confidence 34477778887 665311 1113457899999999999999999999888877654
No 197
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=35.72 E-value=95 Score=25.14 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=31.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
..++.|++.++ |.... ..+...+.+.++++++.+|+..|+..|++-+.
T Consensus 135 ~~~~~Vi~el~-NEP~~--------~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~ 182 (345)
T 3jug_A 135 GKEDTVIINIA-NEWYG--------SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAA 182 (345)
T ss_dssp TCTTTEEEECC-TTCCC--------SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECB
T ss_pred CCCCeEEEEec-CCCCC--------CCCHHHHHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 44566765553 66531 12457788899999999999988754554443
No 198
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=35.27 E-value=1.6e+02 Score=22.98 Aligned_cols=69 Identities=10% Similarity=0.062 Sum_probs=44.5
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
++.++..|++|-+... .+.+.++ .-+ ++.+|-|--... +.-+.++..+.+.++++.
T Consensus 26 ~IgvfDSGvGGLtv~~---~i~~~lP-------------~e~--~iy~~D~a~~PY------G~ks~e~i~~~~~~~~~~ 81 (274)
T 3uhf_A 26 KIGVFDSGVGGLSVLK---SLYEARL-------------FDE--IIYYGDTARVPY------GVKDKDTIIKFCLEALDF 81 (274)
T ss_dssp EEEEEESSSTTHHHHH---HHHHTTC-------------CSE--EEEEECTTTCCC------TTSCHHHHHHHHHHHHHH
T ss_pred eEEEEECCCChHHHHH---HHHHHCC-------------CCC--EEEEecCCCCCC------CCCCHHHHHHHHHHHHHH
Confidence 3788999999966642 2232222 223 456665544322 234688889999999998
Q ss_pred HHhhCCCceEEEEcC
Q 026021 113 LKNRWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~~~p~~~vil~~~ 127 (244)
+.+. +++.+++..
T Consensus 82 L~~~--g~d~IVIAC 94 (274)
T 3uhf_A 82 FEQF--QIDMLIIAC 94 (274)
T ss_dssp HTTS--CCSEEEECC
T ss_pred HHHC--CCCEEEEeC
Confidence 8876 456777766
No 199
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=35.25 E-value=62 Score=22.90 Aligned_cols=40 Identities=10% Similarity=0.119 Sum_probs=22.6
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhc---cccceEeeccCCc
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFS---RTVDVVLRGYSGY 44 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~---~~~~v~n~g~~G~ 44 (244)
||.-|+-+|+.+- + ++|....+.+++. ++++++..|..|.
T Consensus 3 m~ilVlGiGN~L~-g---DDG~G~~v~~~L~~~~p~v~vid~Gt~~~ 45 (157)
T 3pu6_A 3 LKKVLLCVGNELR-G---DDGVAIALGRLVEEQMPEWSVFFGYDTPE 45 (157)
T ss_dssp CCEEEEEECCTTB-G---GGGHHHHHHHHHHHHCTTEEEEEEETCGG
T ss_pred CCEEEEEECCccc-c---cccHHHHHHHHHHhhCCCeEEEECCCCHH
Confidence 5545666777765 2 3555444444442 2477777776553
No 200
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=35.17 E-value=52 Score=26.13 Aligned_cols=51 Identities=14% Similarity=0.122 Sum_probs=30.9
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH---HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY---KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~---~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.+|..-.. .....+.+ ..-++++++.+.+..|++.+++++.|
T Consensus 68 ~~~aD~Vi~a~g~p~~~--------g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP 121 (309)
T 1ur5_A 68 TANSDVIVVTSGAPRKP--------GMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNP 121 (309)
T ss_dssp GTTCSEEEECCCC----------------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSS
T ss_pred HCCCCEEEEcCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCc
Confidence 46789999999863321 11112222 34566778888888899877777654
No 201
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=34.81 E-value=1.3e+02 Score=24.32 Aligned_cols=66 Identities=11% Similarity=0.084 Sum_probs=41.7
Q ss_pred HHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 49 AVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 49 ~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
....+.++.... ...|.+|++.++ |....... .....+.+.+...++++++.+|+..|+. +|++..
T Consensus 164 ~~~~~~~la~ry---------k~~p~Vi~~el~-NEP~~~~~--~~~~~~~~~~~~~~~~~~~~IR~~dp~~-~I~v~g 229 (359)
T 4hty_A 164 TFDFWRRVSERY---------NGINSVAFYEIF-NEPTVFNG--RLGIATWAEWKAINEEAITIIQAHNPKA-IALVAG 229 (359)
T ss_dssp HHHHHHHHHHHT---------TTCTTEEEEESC-SEECCGGG--TTCCCCHHHHHHHHHHHHHHHHHHCTTC-EEEEEC
T ss_pred HHHHHHHHHHHh---------CCCCcEEEEEec-cCCCCCCC--CcCCCCHHHHHHHHHHHHHHHHHhCCCc-EEEEcC
Confidence 444555555543 366788777775 66532110 0123456889999999999999999875 444443
No 202
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=34.12 E-value=35 Score=31.52 Aligned_cols=58 Identities=14% Similarity=0.232 Sum_probs=37.3
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPID 131 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~ 131 (244)
..+.|++|+.+|.|........+ .....+ -..-+++|+.+.+.+|++-|++++.-|+.
T Consensus 571 A~~ADvvVv~vG~~~~~e~Eg~D-R~~l~L---P~~Q~~LI~aV~a~~~~tVVVl~sG~pv~ 628 (845)
T 3abz_A 571 AAKHDKAVLIIGLNGEWETEGYD-RENMDL---PKRTNELVRAVLKANPNTVIVNQSGTPVE 628 (845)
T ss_dssp HHTSSEEEEEEECCTTTSBTTBC-CSSSCC---CTTHHHHHHHHHHHCSCEEEEEECSSCCC
T ss_pred HhcCCEEEEEEecCCccccccCC-cccccC---CHHHHHHHHHHHHhCCCEEEEEeCCCccc
Confidence 36789999999988654322111 111111 13567788888889998877888776653
No 203
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=34.03 E-value=2.1e+02 Score=24.06 Aligned_cols=63 Identities=13% Similarity=0.124 Sum_probs=37.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCcc
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPER 150 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (244)
..+|+++|+.- .....++++++.+.+ ++.+|+-+..+.+.
T Consensus 63 ~~~Dlavi~vp---------------------~~~~~~~v~e~~~~G--i~~vv~~s~G~~e~----------------- 102 (457)
T 2csu_A 63 DEIDLAIIVVP---------------------KRFVKDTLIQCGEKG--VKGVVIITAGFGET----------------- 102 (457)
T ss_dssp SCCSEEEECSC---------------------HHHHHHHHHHHHHHT--CCEEEECCCSSTTS-----------------
T ss_pred CCCCEEEEecC---------------------HHHHHHHHHHHHHcC--CCEEEEecCCCCcc-----------------
Confidence 57899999852 344556666666664 44555444333211
Q ss_pred chHHHHHHHHHHHHHHHhcCCCee
Q 026021 151 TNEAAGAYAKACIEVAGECGLPVV 174 (244)
Q Consensus 151 ~~~~~~~~~~~~~~~a~~~~v~~i 174 (244)
...-...++.+.+.|+++++.++
T Consensus 103 -g~~g~~~~~~l~~~a~~~g~~vi 125 (457)
T 2csu_A 103 -GEEGKREEKELVEIAHKYGMRII 125 (457)
T ss_dssp -CHHHHHHHHHHHHHHHHHTCEEE
T ss_pred -ccccHHHHHHHHHHHHHcCCEEE
Confidence 01122456788888999888877
No 204
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=33.79 E-value=80 Score=26.01 Aligned_cols=51 Identities=10% Similarity=-0.140 Sum_probs=32.4
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhh-CCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNR-WPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~-~p~~~vil~~~~ 128 (244)
....|+|||..|..-- ......+-+.. -++.+++.+.+. .|++.+++++.|
T Consensus 106 ~~daDvVVitag~prk--------pG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP 160 (375)
T 7mdh_A 106 FEDVDWALLIGAKPRG--------PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp TTTCSEEEECCCCCCC--------TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hCCCCEEEEcCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 4678899988764321 12233444444 456666677775 789988888865
No 205
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=33.52 E-value=1.1e+02 Score=24.51 Aligned_cols=55 Identities=18% Similarity=0.190 Sum_probs=32.9
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCc-ccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQ-HVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~-~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.+|.---. +. ..+ ....+.+. .-++++++.+.+..|++.+++++.|
T Consensus 70 l~~aD~Vi~a~g~p~k~--g~--~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 128 (322)
T 1t2d_A 70 LAGADVVIVTAGFTKAP--GK--SDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNP 128 (322)
T ss_dssp GTTCSEEEECCSCSSCT--TC--CSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred hCCCCEEEEeCCCCCCC--CC--CcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 46889999999852210 00 000 00123333 3577788888888899888777665
No 206
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=33.50 E-value=65 Score=20.72 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeech
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLW 177 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~ 177 (244)
.+++.++.+++. +++++++..- .-......+..+|.+++++++...
T Consensus 22 G~~~v~kai~~g--ka~lViiA~D-------------------------~~~~~~~~i~~~c~~~~ip~~~~~ 67 (101)
T 3on1_A 22 GEEQVVKAVQNG--QVTLVILSSD-------------------------AGIHTKKKLLDKCGSYQIPVKVVG 67 (101)
T ss_dssp SHHHHHHHHHTT--CCSEEEEETT-------------------------SCHHHHHHHHHHHHHHTCCEEEES
T ss_pred CHHHHHHHHHcC--CCcEEEEeCC-------------------------CCHHHHHHHHHHHHHcCCCEEEeC
Confidence 355666777664 5667777660 001233456778889999988653
No 207
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=33.37 E-value=84 Score=24.97 Aligned_cols=51 Identities=18% Similarity=0.219 Sum_probs=32.4
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.++..... .....+.+. .-++++++.+.+..|++.+++++.|
T Consensus 65 ~~~aDvViiav~~~~~~--------g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp 118 (319)
T 1a5z_A 65 LKGSDVVIVAAGVPQKP--------GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP 118 (319)
T ss_dssp GTTCSEEEECCCCCCCS--------SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred hCCCCEEEEccCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 36789999999865531 111233232 3467777777777788877776554
No 208
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=33.28 E-value=1.9e+02 Score=23.17 Aligned_cols=117 Identities=9% Similarity=0.029 Sum_probs=65.9
Q ss_pred ChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCCCChhhhh---------------cCCC-CCCCCCCCccchHHHHHHH
Q 026021 98 PLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPPIDEEARL---------------KHPY-VENPTGLPERTNEAAGAYA 159 (244)
Q Consensus 98 ~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~~~~~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~~ 159 (244)
..+.+.+.++..++.+|+.. |+++|++-...+....... .+.. +-+.+.. ......+..+.
T Consensus 149 ~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~-w~~~~~~~~l~ 227 (332)
T 1hjs_A 149 NWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPF-YSSSATLSALK 227 (332)
T ss_dssp CHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSS-SCTTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcc-cCCCCCHHHHH
Confidence 56788899999999999988 8888877655443321111 1100 0011110 01002355677
Q ss_pred HHHHHHHHhcCCCe--eechhHhhhhhhcccccc--cccccCChhHHHHHHHHHHHHHhhc
Q 026021 160 KACIEVAGECGLPV--VDLWTKMQQLADWKTAYL--SDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 160 ~~~~~~a~~~~v~~--iD~~~~~~~~~~~~~~~~--~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
..+++++++++-++ ..+--..... .....+. .++.-.|++|...+-+.++..+++.
T Consensus 228 ~~l~~~~~rygKpv~v~EtG~~~~~~-~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~ 287 (332)
T 1hjs_A 228 SSLDNMAKTWNKEIAVVETNWPISCP-NPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSV 287 (332)
T ss_dssp HHHHHHHHHHCCEEEEEECCCCSBCS-SCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCEEEEEccCccCCC-CCcccccccccCCCCCHHHHHHHHHHHHHHHHhc
Confidence 77888887765443 3332222110 0000000 1466789999999999999988887
No 209
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=32.95 E-value=77 Score=20.41 Aligned_cols=46 Identities=15% Similarity=0.190 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeech
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLW 177 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~ 177 (244)
.+++.++.+++. +++++++..- .-......+..+|..++++|+...
T Consensus 23 G~~~v~kai~~g--ka~lViiA~D-------------------------~~~~~~~~i~~~c~~~~vp~~~~~ 68 (101)
T 3v7q_A 23 GEDLVIKEIRNA--RAKLVLLTED-------------------------ASSNTAKKVTDKCNYYKVPYKKVE 68 (101)
T ss_dssp SHHHHHHHHHTT--CCSEEEEETT-------------------------SCHHHHHHHHHHHHHTTCCEEEES
T ss_pred chhhhHHHHhcC--ceeEEEEecc-------------------------ccccchhhhcccccccCCCeeeec
Confidence 455666777764 5677777661 001123445667899999998764
No 210
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.65 E-value=83 Score=20.11 Aligned_cols=45 Identities=9% Similarity=0.165 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeec
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDL 176 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~ 176 (244)
.+++.++.+++. +++++++..- . -..+...+..+|.+++++++..
T Consensus 19 G~~~v~kai~~g--ka~lViiA~D-~------------------------~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 19 GSNETIRLAKTG--GAKLIIVAKN-A------------------------PKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp SHHHHHHHHHHT--CCSEEEEECC-C------------------------CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHcC--CccEEEEeCC-C------------------------CHHHHHHHHHHHHHcCCCEEEe
Confidence 355666777764 5678877762 1 1134466677899999997554
No 211
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.59 E-value=63 Score=23.64 Aligned_cols=48 Identities=17% Similarity=0.005 Sum_probs=27.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..+|.||...|..... ....+.-......+++.+++...+ +++.++..
T Consensus 66 ~~~d~vi~~a~~~~~~---------~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~ 113 (227)
T 3dhn_A 66 KGADAVISAFNPGWNN---------PDIYDETIKVYLTIIDGVKKAGVN-RFLMVGGA 113 (227)
T ss_dssp TTCSEEEECCCC---------------CCSHHHHHHHHHHHHHHHTTCS-EEEEECCS
T ss_pred cCCCEEEEeCcCCCCC---------hhHHHHHHHHHHHHHHHHHHhCCC-EEEEeCCh
Confidence 4689999888754211 002233455667778888876533 67777654
No 212
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=32.57 E-value=70 Score=25.35 Aligned_cols=50 Identities=14% Similarity=0.169 Sum_probs=32.9
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHH---HHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHN---LHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~---l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.+|.- .+ .....+.+.++ ++++++.+.+..|++.+++++.|
T Consensus 75 l~~aD~Vi~aag~~---~p------G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP 127 (303)
T 2i6t_A 75 SAHSKVVIFTVNSL---GS------SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP 127 (303)
T ss_dssp GTTCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSS
T ss_pred HCCCCEEEEcCCCC---CC------CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCh
Confidence 57899999999873 11 12233444444 67777888887899877777664
No 213
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=32.48 E-value=24 Score=24.85 Aligned_cols=103 Identities=16% Similarity=0.065 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhh-----CCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeee
Q 026021 101 EYKHNLHSIVSFLKNR-----WPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVD 175 (244)
Q Consensus 101 ~~~~~l~~~v~~~~~~-----~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD 175 (244)
..+...+++-.++... -|++.|++..|....-+-.. ..+....+.-+.+-.......++++|+++||+++.
T Consensus 23 ~iK~~~R~~~~e~~~~~m~~~V~~A~vvi~NPth~AVAL~Y----d~~~~~AP~VvAKG~g~~A~~I~e~A~e~gVPi~e 98 (144)
T 2jlj_A 23 EIKSKRRQFHQEIQSRNMRENVKRSSVVVAAATHIAIGILY----KRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQ 98 (144)
T ss_dssp HHHHHHHHHHHHHCCCCHHHHHHTCSEEEEETTTEEEEEEC----CTTTCSSCEEEEEEETHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHhhHHhcCCCCCCEEEECCCcEEEEEEe----CCCCCCCCEEEEEeCCHHHHHHHHHHHHcCCCEEe
Confidence 4555666665555442 37888999988654222111 11111222233444557789999999999999998
Q ss_pred chhHhhhhhhcccccccc-cccCChhHHHHHHHHHHHH
Q 026021 176 LWTKMQQLADWKTAYLSD-GLHLNETGNRVVFEEVVMK 212 (244)
Q Consensus 176 ~~~~~~~~~~~~~~~~~D-giHpn~~G~~~~a~~l~~~ 212 (244)
--..-..... ..+ |-.--+.-|+.+|+.|.-.
T Consensus 99 ~~~LAr~Ly~-----~~~ig~~IP~ely~aVAeiLa~v 131 (144)
T 2jlj_A 99 RIPLARALYW-----DALVDHYIPAEQIEATAEVLRWL 131 (144)
T ss_dssp CHHHHHHHHH-----HCCTTSBCCGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHH-----hCCCCCccCHHHHHHHHHHHHHH
Confidence 5433322110 111 2334567788888877543
No 214
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=32.14 E-value=1.2e+02 Score=24.19 Aligned_cols=51 Identities=20% Similarity=0.226 Sum_probs=32.2
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHH---HHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYK---HNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~---~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.+|.--- + .....+.+. .-++++++.+.+..|++.+++++.|
T Consensus 80 l~~aD~VI~avg~p~k--~------g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 133 (328)
T 2hjr_A 80 LQNSDVVIITAGVPRK--P------NMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNP 133 (328)
T ss_dssp GTTCSEEEECCSCCCC--T------TCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred HCCCCEEEEcCCCCCC--C------CCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 4678999999985321 0 112223333 3467777788777899877776654
No 215
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=32.05 E-value=1.8e+02 Score=22.54 Aligned_cols=69 Identities=22% Similarity=0.351 Sum_probs=43.2
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
++.++..|++|.+.. ..+.+..+ .-+ ++.+|-++.... ...+.++..+...++++.
T Consensus 9 ~IgvfDSGvGGltv~---~~i~~~lP-------------~~~--~iy~~D~~~~Py------G~~s~~~i~~~~~~~~~~ 64 (276)
T 2dwu_A 9 VIGVLDSGVGGLTVA---SEIIRQLP-------------KES--ICYIGDNERCPY------GPRSVEEVQSFVFEMVEF 64 (276)
T ss_dssp EEEEEESSSTTHHHH---HHHHHHCT-------------TSC--EEEEECGGGCCC------TTSCHHHHHHHHHHHHHH
T ss_pred eEEEEeCCcchHHHH---HHHHHhCC-------------CCc--EEEccCCCCCCC------CCCCHHHHHHHHHHHHHH
Confidence 367888999995542 22333222 223 456775554321 234677888888888888
Q ss_pred HHhhCCCceEEEEcC
Q 026021 113 LKNRWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~~~p~~~vil~~~ 127 (244)
+.+. +++.+++..
T Consensus 65 L~~~--g~d~IViAC 77 (276)
T 2dwu_A 65 LKQF--PLKALVVAC 77 (276)
T ss_dssp HTTS--CEEEEEECC
T ss_pred HHHC--CCCEEEEeC
Confidence 8775 577888876
No 216
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=31.97 E-value=1.1e+02 Score=20.07 Aligned_cols=13 Identities=15% Similarity=0.135 Sum_probs=9.3
Q ss_pred CCCeEEEEccccc
Q 026021 1 MRPKIYLFGDSIT 13 (244)
Q Consensus 1 ~~~~il~iGDSit 13 (244)
|..+|+++.|.-.
T Consensus 9 ~~~~iLivdd~~~ 21 (140)
T 3c97_A 9 MPLSVLIAEDNDI 21 (140)
T ss_dssp -CCEEEEECCCHH
T ss_pred CCceEEEEcCCHH
Confidence 3347899988877
No 217
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=31.76 E-value=1.1e+02 Score=24.40 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=33.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH---HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY---KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~---~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.+|.--..-.. .......+.. ..-++++++.+.+..|++.+++++.|
T Consensus 76 ~~~aDiVi~a~g~p~~~g~~---~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP 134 (331)
T 1pzg_A 76 LTGADCVIVTAGLTKVPGKP---DSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNP 134 (331)
T ss_dssp HTTCSEEEECCSCSSCTTCC---GGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred hCCCCEEEEccCCCCCCCcc---cCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCc
Confidence 46789999999863221000 0000123323 33477888888888899877777665
No 218
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=31.28 E-value=1.6e+02 Score=23.16 Aligned_cols=13 Identities=8% Similarity=-0.066 Sum_probs=9.7
Q ss_pred CCccEEEEEeccC
Q 026021 71 VSTIAVAVFFGAN 83 (244)
Q Consensus 71 ~~pd~vii~~G~N 83 (244)
...|+|++++...
T Consensus 86 ~~aDvVi~avp~~ 98 (317)
T 4ezb_A 86 ACADVVLSLVVGA 98 (317)
T ss_dssp GGCSEEEECCCGG
T ss_pred hcCCEEEEecCCH
Confidence 5689999987543
No 219
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=31.22 E-value=1.3e+02 Score=25.53 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 103 KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 103 ~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..-+.++++.+++..|++-++..|.|
T Consensus 136 i~v~~~i~~~i~~~~P~A~~in~tNP 161 (477)
T 3u95_A 136 VKLALEIAEKMKKMAPKAYLMQTANP 161 (477)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECSSC
T ss_pred HHHHHHHHHHHHhhCCCeEEEEecCh
Confidence 34568889999999999987777776
No 220
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=31.12 E-value=1.2e+02 Score=24.86 Aligned_cols=53 Identities=13% Similarity=0.129 Sum_probs=34.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEE
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLI 125 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~ 125 (244)
..+||+|+++.|. |....+.- ....++.+.|....+.+.+.+++.. +.+++++
T Consensus 255 ~f~PdlIvvsaG~-Da~~~DpL-g~l~lt~~g~~~~~~~l~~~a~~~~-~g~vv~v 307 (369)
T 1zz1_A 255 AYRPQLIIVGSGF-DASMLDPL-ARMMVTADGFRQMARRTIDCAADIC-DGRIVFV 307 (369)
T ss_dssp HHCCSEEEEEECC-TTBTTCTT-CCCBBCHHHHHHHHHHHHHHHHHHS-TTCEEEE
T ss_pred HcCCCEEEEeCCc-cCCCCCCC-CCcccCHHHHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 4899999999996 33222211 2346788889888888888777632 2334444
No 221
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=30.88 E-value=1.6e+02 Score=23.04 Aligned_cols=47 Identities=6% Similarity=0.084 Sum_probs=33.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEc
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLIT 126 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~ 126 (244)
..|++|.+.++ |.... ..+.+.+...++++++.+|+..|+..|++-+
T Consensus 132 ~~~~vv~~~l~-NEP~~--------~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~ 178 (320)
T 3nco_A 132 DYPDKLFFEIF-NEPAQ--------NLTPTKWNELYPKVLGEIRKTNPSRIVIIDV 178 (320)
T ss_dssp TSCTTEEEECC-SCCCT--------TSCHHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred CCCceEEEEec-cCCCC--------CCCHHHHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 56777766653 66532 2356788999999999999999877665553
No 222
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=30.71 E-value=84 Score=20.17 Aligned_cols=45 Identities=11% Similarity=0.188 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeec
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDL 176 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~ 176 (244)
.+++..+.+++. +++++++..- . -..+...+..+|.+++++++-+
T Consensus 20 G~~~v~kai~~g--ka~lViiA~D-~------------------------~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 20 GARKSIQYAKMG--GAKLIIVARN-A------------------------RPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp SHHHHHHHHHHT--CCSEEEEETT-S------------------------CHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHcC--CCcEEEEeCC-C------------------------CHHHHHHHHHHHHhcCCCEEEe
Confidence 355666777764 5678887762 1 1134466777899999997653
No 223
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides}
Probab=30.57 E-value=1.3e+02 Score=25.28 Aligned_cols=25 Identities=12% Similarity=0.155 Sum_probs=21.1
Q ss_pred cCChhHHHHHHHHHHHHHhhcCCCC
Q 026021 196 HLNETGNRVVFEEVVMKLKTEGLSL 220 (244)
Q Consensus 196 Hpn~~G~~~~a~~l~~~l~~~~~~~ 220 (244)
+++++.|..+.+...+.|++..+..
T Consensus 172 ~~~~~~y~~l~~~~~~aik~~~P~~ 196 (500)
T 4ekj_A 172 KADQAAYFELYDVTARAIKAIDPSL 196 (500)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCcc
Confidence 5789999999999999999875543
No 224
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=29.92 E-value=1.5e+02 Score=20.95 Aligned_cols=62 Identities=18% Similarity=0.198 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhC--CCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCC
Q 026021 101 EYKHNLHSIVSFLKNRW--PNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLP 172 (244)
Q Consensus 101 ~~~~~l~~~v~~~~~~~--p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~ 172 (244)
...-.+..+++.++..+ | .++++++..|..-.. ..+.+....+.+....+.+++..++.++.
T Consensus 92 ~H~~~l~~~L~~~~~~g~~P-~~v~ligi~p~~~~~---------g~~LS~~v~~av~~a~~~i~~~l~~~g~~ 155 (162)
T 1cfz_A 92 PHQLGLADVLSALRFTGEFP-KKLTLVGVIPESLEP---------HIGLTPTVEAMIEPALEQVLAALRESGVE 155 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-SEEEEEEECCSCCCS---------BSSCCHHHHTTHHHHHHHHHHHHHTTTCC
T ss_pred CCcCCHHHHHHHHHHcCCCC-CeEEEEEEEEeEcCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 34456788888887763 4 256666665543221 11334455566666666666666666654
No 225
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A
Probab=29.57 E-value=1.3e+02 Score=25.82 Aligned_cols=53 Identities=15% Similarity=0.079 Sum_probs=38.1
Q ss_pred CccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 72 STIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 72 ~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
...+-.+.+| |...-. ......+.++|.+.++++.+.+|+..|+.+|+.+++.
T Consensus 172 p~~vkyweiG-NE~~g~---w~~g~~t~~~Y~~~~~~~a~a~k~~dP~i~via~G~~ 224 (513)
T 2c7f_A 172 PHNIKVWCLG-NAMDGP---WQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSS 224 (513)
T ss_dssp CCCCCEEEES-CCCCCT---TSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred CCCceEEEec-cCcccc---cccCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3456677776 665421 1112457899999999999999999999887776654
No 226
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=29.29 E-value=1.2e+02 Score=19.79 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=24.4
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~~ 129 (244)
..||+|++-+..-|. +- -++++.+++. .+.++|++++...
T Consensus 46 ~~~dlvi~D~~l~~~------------~g-------~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPM------------DG-------WETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp SCCSEEEEESCCSSS------------CH-------HHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred cCCCEEEEeCCCCCC------------CH-------HHHHHHHHcCcccCCCCEEEEECCC
Confidence 678999987654332 11 1345555553 3567788887654
No 227
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=29.26 E-value=96 Score=24.44 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=28.4
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.+|..-.. . .....-..+=..-++++++.+.+..|++.+++++.|
T Consensus 65 ~~~aDvVIi~~~~~~~~--g---~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP 118 (304)
T 2v6b_A 65 LADAQVVILTAGANQKP--G---ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNP 118 (304)
T ss_dssp GTTCSEEEECC-----------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSS
T ss_pred hCCCCEEEEcCCCCCCC--C---CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 46789999998753321 0 001111222334557777777777788877776554
No 228
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=29.00 E-value=84 Score=20.42 Aligned_cols=44 Identities=14% Similarity=0.001 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeee
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVD 175 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD 175 (244)
.+++.++.+++. +++++++..-- -..+...+..+|.+++++++.
T Consensus 26 G~~~v~kai~~g--kaklVilA~D~-------------------------~~~~~~~i~~~c~~~~ip~~~ 69 (105)
T 3u5e_c 26 GYKSTVKSLRQG--KSKLIIIAANT-------------------------PVLRKSELEYYAMLSKTKVYY 69 (105)
T ss_dssp SHHHHHHHHHTT--CCSEEEECTTS-------------------------CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHcC--CceEEEEeCCC-------------------------CHHHHHHHHHHHHHcCCCEEE
Confidence 355666667664 56777776610 112346667788889999984
No 229
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=28.65 E-value=75 Score=21.24 Aligned_cols=49 Identities=12% Similarity=0.124 Sum_probs=36.5
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..+++-|+|-....|.. ...+++.|...++..++..|+.+. +-+|+..|
T Consensus 29 ~DrygGV~Vd~~~l~~~--------~~~d~~~F~~~L~~SL~~Wr~~gk--~~IWlklp 77 (113)
T 3fxt_A 29 LDRFGGISVRLARLDAL--------DRLDAAAFQKGLQAAVQQWRSEGR--TAVWLHIP 77 (113)
T ss_dssp ECTTSCEEEEHHHHTTT--------SCBCHHHHHHHHHHHHHHHHHTTC--CEEEEEEE
T ss_pred ccCcCCEEEeCCccCCc--------CcCCHHHHHHHHHHHHHHHHHcCC--eeEEEEcC
Confidence 46777788887655542 134789999999999999999864 47777663
No 230
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=28.13 E-value=1.2e+02 Score=19.85 Aligned_cols=44 Identities=11% Similarity=0.160 Sum_probs=28.0
Q ss_pred HHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeec
Q 026021 106 LHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDL 176 (244)
Q Consensus 106 l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~ 176 (244)
+++.++.+++. +++++++..- .-..+...+..+|.+++++++-+
T Consensus 26 ~~~v~kai~~g--ka~lViiA~D-------------------------~~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 26 SKRTIKFVKHG--EGKLVVLAGN-------------------------IPKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp HHHHHHHHHTT--CCSEEEECTT-------------------------CBHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHcC--CceEEEEeCC-------------------------CCHHHHHHHHHHHHHcCCCEEEE
Confidence 45556666654 5677777661 11244566777899999997654
No 231
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=27.76 E-value=1.7e+02 Score=21.02 Aligned_cols=41 Identities=22% Similarity=0.124 Sum_probs=27.4
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPI 130 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~ 130 (244)
..||+|++-+..-|. + --++++.+++..|.++|++++...-
T Consensus 42 ~~~dlvllD~~lp~~------------~-------g~~~~~~lr~~~~~~~ii~lt~~~~ 82 (220)
T 1p2f_A 42 EAFHVVVLDVMLPDY------------S-------GYEICRMIKETRPETWVILLTLLSD 82 (220)
T ss_dssp SCCSEEEEESBCSSS------------B-------HHHHHHHHHHHCTTSEEEEEESCCS
T ss_pred CCCCEEEEeCCCCCC------------C-------HHHHHHHHHhcCCCCcEEEEEcCCC
Confidence 368999887654332 1 1246677777778899999987654
No 232
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=27.71 E-value=1.6e+02 Score=21.28 Aligned_cols=53 Identities=19% Similarity=0.257 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHHHhhCCCceEEEEcC------CCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHh
Q 026021 100 HEYKHNLHSIVSFLKNRWPNTLVLLITP------PPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGE 168 (244)
Q Consensus 100 ~~~~~~l~~~v~~~~~~~p~~~vil~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 168 (244)
..+...+..+++.+++. ...+++++. .|.+...+ +..+....+|+.+.+.|++
T Consensus 109 ~~~~~~~~~ll~~l~~~--~~~~vlVsNEVG~GiVP~~~~~R--------------~frD~~G~lnq~lA~~ad~ 167 (180)
T 1c9k_A 109 RAIDDEIQILIAACQRC--PAKVVLVTNEVGMGIVPENRLAR--------------HFRDIAGRVNQRLAAAADE 167 (180)
T ss_dssp HHHHHHHHHHHHHHHHC--CSEEEEECCCCCSSCCCSSHHHH--------------HHHHHHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHHHHHcc--CCCEEEEEccccCCCCCCCHHHH--------------HHHHHHHHHHHHHHHHCCE
Confidence 34677888889888886 356777763 23332222 3446777888888887765
No 233
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=27.44 E-value=1e+02 Score=20.34 Aligned_cols=45 Identities=7% Similarity=0.068 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeec
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDL 176 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~ 176 (244)
.+++.++.+++. +++++++.-- .-..+...+..+|..++++++..
T Consensus 30 G~~~t~kai~~g--kakLVilA~D-------------------------~~~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 30 GYKTVLKTLRSS--LGKLIILANN-------------------------CPPLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp SHHHHHHHHHTT--CCSEEEECSC-------------------------CCHHHHHHHHHHHHHTTCCEECC
T ss_pred CHHHHHHHHHcC--CceEEEEeCC-------------------------CCHHHHHHHHHHHHHcCCcEEEe
Confidence 355666666664 5677777651 01134466777899999999876
No 234
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=27.38 E-value=46 Score=26.36 Aligned_cols=65 Identities=12% Similarity=0.183 Sum_probs=37.8
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEe
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFF 80 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~ 80 (244)
|||.|+++|+++-. ..|... .+.....--++..|.|..+.. ...+..... .....+|+|..
T Consensus 191 lrPdVV~FGE~lp~-----~~~~~a-~~~~~~aDllLviGTSl~V~P--aa~l~~~a~-----------~~g~~~v~IN~ 251 (290)
T 3u31_A 191 FKPNIILFGEVVSS-----DLLKEA-EEEIAKCDLLLVIGTSSTVST--ATNLCHFAC-----------KKKKKIVEINI 251 (290)
T ss_dssp EEEEECCBTSBCCH-----HHHHHH-HHHHHHCSEEEEESCCSCSHH--HHHHHHHHH-----------HTTCCEEEEES
T ss_pred ECCeEEEcCCCCCH-----HHHHHH-HHHHhcCCEEEEECcCCcchh--HHHHHHHHH-----------HcCCEEEEECC
Confidence 47899999999862 123322 223322234777788886643 223433333 25677888887
Q ss_pred ccCC
Q 026021 81 GAND 84 (244)
Q Consensus 81 G~ND 84 (244)
+...
T Consensus 252 ~~t~ 255 (290)
T 3u31_A 252 SKTY 255 (290)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 7543
No 235
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=27.32 E-value=2.3e+02 Score=22.45 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=27.9
Q ss_pred CccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 72 STIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 72 ~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
++|.||.+.|.+....+. ...... ......+++.+++.+.+.+++.++..
T Consensus 46 ~~d~Vih~a~~~~~~~~~---~~~~~n----~~~~~~l~~a~~~~~~~~~~v~~Ss~ 95 (369)
T 3st7_A 46 KADFIVHLAGVNRPEHDK---EFSLGN----VSYLDHVLDILTRNTKKPAILLSSSI 95 (369)
T ss_dssp HCSEEEECCCSBCTTCST---TCSSSC----CBHHHHHHHHHTTCSSCCEEEEEEEG
T ss_pred cCCEEEECCcCCCCCCHH---HHHHHH----HHHHHHHHHHHHHhCCCCeEEEeCch
Confidence 488999888876542111 000111 22345677777776544567777653
No 236
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=27.23 E-value=1.2e+02 Score=19.26 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=24.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~~ 129 (244)
..||+|++-+...+. +. .++++.+++. .+.++|++++...
T Consensus 50 ~~~dlvl~D~~l~~~------------~g-------~~~~~~l~~~~~~~~~~ii~~s~~~ 91 (129)
T 1p6q_A 50 NPHHLVISDFNMPKM------------DG-------LGLLQAVRANPATKKAAFIILTAQG 91 (129)
T ss_dssp SCCSEEEECSSSCSS------------CH-------HHHHHHHTTCTTSTTCEEEECCSCC
T ss_pred CCCCEEEEeCCCCCC------------CH-------HHHHHHHhcCccccCCCEEEEeCCC
Confidence 678999876543222 11 1356667664 4678888887643
No 237
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=26.93 E-value=1.3e+02 Score=19.56 Aligned_cols=39 Identities=8% Similarity=-0.073 Sum_probs=23.5
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. +- -++++.+++.. .++|++++...
T Consensus 47 ~~~dlvllD~~l~~~------------~g-------~~l~~~l~~~~-~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDG------------DG-------WTLCKKIRNVT-TCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTE------------EH-------HHHHHHHHTTC-CCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCC------------CH-------HHHHHHHccCC-CCCEEEEEcCC
Confidence 679999887643332 11 13556666653 66788887643
No 238
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.62 E-value=1.8e+02 Score=20.92 Aligned_cols=45 Identities=22% Similarity=-0.015 Sum_probs=28.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
...|.||...|.... .............+++.+++.+ .++++++.
T Consensus 61 ~~~d~vi~~ag~~~~----------~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS 105 (224)
T 3h2s_A 61 DSVDAVVDALSVPWG----------SGRGYLHLDFATHLVSLLRNSD--TLAVFILG 105 (224)
T ss_dssp TTCSEEEECCCCCTT----------SSCTHHHHHHHHHHHHTCTTCC--CEEEEECC
T ss_pred ccCCEEEECCccCCC----------cchhhHHHHHHHHHHHHHHHcC--CcEEEEec
Confidence 568999998887511 0113344556677788887765 56777754
No 239
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=26.17 E-value=1.6e+02 Score=23.29 Aligned_cols=50 Identities=10% Similarity=-0.075 Sum_probs=32.0
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhC-CCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRW-PNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~-p~~~vil~~~~ 128 (244)
..+|+||+..|..... ...+.+.+.. -...+++.+++.. |++++++++.|
T Consensus 79 ~~~D~Vih~Ag~~~~~--------~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp 132 (327)
T 1y7t_A 79 KDADYALLVGAAPRKA--------GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNP 132 (327)
T ss_dssp TTCSEEEECCCCCCCT--------TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCCCEEEECCCcCCCC--------CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCc
Confidence 5789999999865321 1112333443 4556777788876 88888887765
No 240
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=26.10 E-value=1.5e+02 Score=19.96 Aligned_cols=82 Identities=12% Similarity=0.082 Sum_probs=43.9
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhcc-ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSR-TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~-~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
||+++=|+-+ ....+.+.+.. ++.++..+.+|... ++.. . ..+||+|++=+-.
T Consensus 14 rILiVDD~~~--------~r~~l~~~L~~~G~~~v~~a~~g~~a------l~~~-~-----------~~~~DlillD~~M 67 (134)
T 3to5_A 14 KILIVDDFST--------MRRIVKNLLRDLGFNNTQEADDGLTA------LPML-K-----------KGDFDFVVTDWNM 67 (134)
T ss_dssp CEEEECSCHH--------HHHHHHHHHHHTTCCCEEEESSHHHH------HHHH-H-----------HHCCSEEEEESCC
T ss_pred EEEEEeCCHH--------HHHHHHHHHHHcCCcEEEEECCHHHH------HHHH-H-----------hCCCCEEEEcCCC
Confidence 7999999888 22344444421 14444444455322 2222 2 2679999876532
Q ss_pred CCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCCCC
Q 026021 83 NDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPPPI 130 (244)
Q Consensus 83 ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~~~ 130 (244)
=+. +-- ++++.+|+. .+.++|+++|....
T Consensus 68 P~m------------dG~-------el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 68 PGM------------QGI-------DLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp SSS------------CHH-------HHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred CCC------------CHH-------HHHHHHHhCCCCCCCeEEEEECCCC
Confidence 222 111 345555543 46778999887443
No 241
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A
Probab=25.72 E-value=1.7e+02 Score=24.96 Aligned_cols=52 Identities=15% Similarity=0.066 Sum_probs=37.9
Q ss_pred ccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 73 TIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 73 pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..+-.+.+| |..... ......+.++|.+.++++.+.+|+..|+.+|+..++.
T Consensus 165 ~~v~yweiG-NE~~g~---w~~g~~t~~~Y~~~~~~~a~aik~~dP~i~via~G~~ 216 (502)
T 1qw9_A 165 HKIKTWCLG-NAMDGP---WQIGHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSS 216 (502)
T ss_dssp CCCCEEEES-SCCCST---TSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred CCCeEEEEe-CCCCCC---cCCCCcCHHHHHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 366777786 665421 0123457899999999999999999999887766554
No 242
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=25.53 E-value=1.8e+02 Score=24.85 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=24.1
Q ss_pred hhHHHHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 99 LHEYKHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 99 ~~~~~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
...-..-+.++++.+++..|++-++.+|.|
T Consensus 125 ~~rni~i~~~i~~~i~~~~P~A~ii~~TNP 154 (480)
T 1obb_A 125 NYNQLKYFVDIARKIEKLSPKAWYLQAANP 154 (480)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTCEEEECSSC
T ss_pred hhhhHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 445567889999999999999977777665
No 243
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=25.36 E-value=1.5e+02 Score=19.57 Aligned_cols=14 Identities=21% Similarity=-0.095 Sum_probs=10.3
Q ss_pred CCccEEEEEeccCC
Q 026021 71 VSTIAVAVFFGAND 84 (244)
Q Consensus 71 ~~pd~vii~~G~ND 84 (244)
.+||+|++-+...+
T Consensus 57 ~~~dlvl~D~~mp~ 70 (143)
T 3m6m_D 57 EDYDAVIVDLHMPG 70 (143)
T ss_dssp SCCSEEEEESCCSS
T ss_pred CCCCEEEEeCCCCC
Confidence 78999998765433
No 244
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=25.35 E-value=1.1e+02 Score=19.68 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeee
Q 026021 105 NLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVD 175 (244)
Q Consensus 105 ~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD 175 (244)
.+++.++.+++. +++++++.. ... ..+...+..+|.+++++++.
T Consensus 26 G~~~v~kai~~g--kaklViiA~-D~~------------------------~~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 26 GYKSTIKAIRNG--TAKLVFISN-NCP------------------------TVRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp SHHHHHHHHHHT--CCCEEEECT-TSC------------------------HHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHcC--CceEEEEeC-CCC------------------------HHHHHHHHHHHHHcCCcEEE
Confidence 355666666664 567777766 110 12235556678888999885
No 245
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=25.26 E-value=33 Score=23.35 Aligned_cols=84 Identities=17% Similarity=0.086 Sum_probs=46.7
Q ss_pred CCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeechhHhhhhhhcccccccc-cc
Q 026021 117 WPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLWTKMQQLADWKTAYLSD-GL 195 (244)
Q Consensus 117 ~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~~~~~~~~~~~D-gi 195 (244)
-|++.+++..|....-+-.. ..+....+.-+.+-.......++++|+++||+++.--..-..... ..+ |-
T Consensus 35 V~~A~vvi~NPth~AVAL~Y----d~~~~~AP~VvAKG~~~~A~~I~~~A~e~~VPi~e~~~LAr~Ly~-----~~~ig~ 105 (123)
T 2jli_A 35 VKRSSVVVANPTHIAIGILY----KRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYW-----DALVDH 105 (123)
T ss_dssp HHTCSEEEECCCSEEEEEEC----CTTTCSSCEEEEEEETHHHHHHHHHHHHHTCCEEECHHHHHHHHH-----HCCTTS
T ss_pred CCcCcEEEECCCceEEEEEE----CCCCCCCCEEEEEeCCHHHHHHHHHHHHcCCCEEeCHHHHHHHHH-----hCCCCC
Confidence 36788999988654222111 111111222333445577899999999999999885433322110 111 22
Q ss_pred cCChhHHHHHHHHH
Q 026021 196 HLNETGNRVVFEEV 209 (244)
Q Consensus 196 Hpn~~G~~~~a~~l 209 (244)
.--+.-|+.+|+.|
T Consensus 106 ~IP~ely~aVAeiL 119 (123)
T 2jli_A 106 YIPAEQIEATAEVL 119 (123)
T ss_dssp BCCGGGHHHHHHHH
T ss_pred ccCHHHHHHHHHHH
Confidence 33556677777665
No 246
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=25.03 E-value=2.2e+02 Score=21.47 Aligned_cols=28 Identities=4% Similarity=-0.146 Sum_probs=20.7
Q ss_pred ChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 98 PLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 98 ~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
..+...+.+++.++.++..+ ++.+++.+
T Consensus 78 ~~~~~~~~~~~~i~~A~~lG--~~~v~~~~ 105 (286)
T 3dx5_A 78 DFEKTIEKCEQLAILANWFK--TNKIRTFA 105 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--CCEEEECS
T ss_pred hHHHHHHHHHHHHHHHHHhC--CCEEEEcC
Confidence 35677889999999999985 45665543
No 247
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=24.49 E-value=1.4e+02 Score=18.95 Aligned_cols=40 Identities=10% Similarity=0.012 Sum_probs=24.8
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHh--hCCCceEEEEcCCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKN--RWPNTLVLLITPPP 129 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~--~~p~~~vil~~~~~ 129 (244)
..||+|++-+..-+. +. -++++.+++ ..+.++|++++...
T Consensus 48 ~~~dlvi~D~~l~~~------------~g-------~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 48 GGYGFVISDWNMPNM------------DG-------LELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp CCCCEEEEESCCSSS------------CH-------HHHHHHHHC--CCTTCCEEEEESSC
T ss_pred cCCCEEEEeCCCCCC------------CH-------HHHHHHHHhhcccCCCcEEEEecCc
Confidence 679999886643332 11 235666666 34677788887643
No 248
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=24.12 E-value=1.8e+02 Score=22.83 Aligned_cols=51 Identities=20% Similarity=0.144 Sum_probs=32.2
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHH---HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEY---KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~---~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+.+|..-.. .....+.+ ..-++++++.+.+..|++.+++++.|
T Consensus 70 ~~~aDiVi~avg~p~~~--------g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp 123 (317)
T 2ewd_A 70 ISGSDVVIITASIPGRP--------KDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNP 123 (317)
T ss_dssp GTTCSEEEECCCCSSCC--------SSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred hCCCCEEEEeCCCCCCC--------CCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 46789999999864321 11122223 34467788888887888767666654
No 249
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=23.62 E-value=97 Score=26.66 Aligned_cols=60 Identities=18% Similarity=0.090 Sum_probs=34.4
Q ss_pred eEEEEcccccccccCCCChHHHHHHhhccccceEeeccCC-cchHHHHHHHHhhccccCCCcccccccCCccEEEEEecc
Q 026021 4 KIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSG-YNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGA 82 (244)
Q Consensus 4 ~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ 82 (244)
+|++.||.... ..-...+.... .+++++..++-| ..+......++ ..+|.++||..|.
T Consensus 197 ~iLftGD~~~~-----~~~e~~l~~~~-~~~DvLkv~HHG~S~~s~s~~fl~---------------~v~P~~aiiS~g~ 255 (547)
T 2bib_A 197 KIYLGGDLDNV-----HGAEDKYGPLI-GKVDLMKFNHHHDTNKSNTKDFIK---------------NLSPSLIVQTSDS 255 (547)
T ss_dssp EEEECTTCCST-----TSHHHHHHHHH-CCCSEEECTTTTBCSSSSCHHHHH---------------HHCCSEEEESBSS
T ss_pred EEEecCCccch-----hhhhhhhcccc-cceeEEEeccccCcccCChHHHHH---------------hcCCcEEEEcCCc
Confidence 67888887652 11122333322 247888888776 32222222333 3678899999998
Q ss_pred CC
Q 026021 83 ND 84 (244)
Q Consensus 83 ND 84 (244)
+.
T Consensus 256 ~n 257 (547)
T 2bib_A 256 LP 257 (547)
T ss_dssp CS
T ss_pred cc
Confidence 63
No 250
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=23.04 E-value=1.7e+02 Score=21.19 Aligned_cols=43 Identities=23% Similarity=0.217 Sum_probs=28.7
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEcC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLITP 127 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~~ 127 (244)
...|.+++.+-.+|. +.|...+..+++.++...++.+++++..
T Consensus 97 ~~~d~~i~v~d~~~~--------------~s~~~~~~~~~~~i~~~~~~~piilv~n 139 (214)
T 3q3j_B 97 SDSDAVLLCFDISRP--------------ETVDSALKKWRTEILDYCPSTRVLLIGC 139 (214)
T ss_dssp TTCSEEEEEEETTCT--------------HHHHHHHTHHHHHHHHHCTTSEEEEEEE
T ss_pred CCCeEEEEEEECcCH--------------HHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 567888888744432 4455556777777777767777887754
No 251
>1lg4_A Doppel protein, prion-like protein; scrapie, prion protein; NMR {Homo sapiens} SCOP: d.6.1.1
Probab=23.03 E-value=39 Score=22.31 Aligned_cols=26 Identities=19% Similarity=0.287 Sum_probs=14.5
Q ss_pred eechhHhhhhhhcccccccccccCCh
Q 026021 174 VDLWTKMQQLADWKTAYLSDGLHLNE 199 (244)
Q Consensus 174 iD~~~~~~~~~~~~~~~~~DgiHpn~ 199 (244)
||+-+.-+.......+.++||||.+.
T Consensus 45 IDfGaEgNrYYeanYwqFPDgIhY~g 70 (129)
T 1lg4_A 45 IDFGAEGNRYYEANYWQFPDGIHYNG 70 (129)
T ss_dssp CCCCHHHHHHHHHHGGGSCSCCCSCS
T ss_pred eecccccchhhhhccccCCCcccccc
Confidence 45444333322233467899999853
No 252
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=22.76 E-value=2.5e+02 Score=21.12 Aligned_cols=26 Identities=12% Similarity=0.096 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHHHHHhhCCCceEEEEc
Q 026021 99 LHEYKHNLHSIVSFLKNRWPNTLVLLIT 126 (244)
Q Consensus 99 ~~~~~~~l~~~v~~~~~~~p~~~vil~~ 126 (244)
.+...+.+++.++.++..+ ++.+++.
T Consensus 88 r~~~~~~~~~~i~~A~~lG--a~~v~~~ 113 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALD--CRTLHAM 113 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHHHHHHHHcC--CCEEEEc
Confidence 4667788999999999874 4455553
No 253
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=22.42 E-value=3.3e+02 Score=22.44 Aligned_cols=45 Identities=11% Similarity=0.103 Sum_probs=33.3
Q ss_pred ccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEE
Q 026021 73 TIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLI 125 (244)
Q Consensus 73 pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~ 125 (244)
+.++.+.+ .|.... ...+.+.+...++++++.+|+..|+..|++-
T Consensus 181 ~~V~~~el-~NEP~~-------~~~~~~~~~~~~~~a~~~IR~~~p~~~Iii~ 225 (399)
T 3n9k_A 181 DVVIGIEL-LNEPLG-------PVLNMDKLKQFFLDGYNSLRQTGSVTPVIIH 225 (399)
T ss_dssp TTEEEEES-CSCCCG-------GGSCHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CceEEEEe-ccCCCC-------CCCCHHHHHHHHHHHHHHHHhcCCCCeEEEe
Confidence 66666665 465532 1246788999999999999999988777664
No 254
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.03 E-value=1.8e+02 Score=19.18 Aligned_cols=90 Identities=20% Similarity=0.334 Sum_probs=47.0
Q ss_pred ChhHHHHHHHHHHHHHHhhCCCceEEEEcCCCCChhhhhcCCCCCCCCCCCccchHHHHHHHHHHHHHHHhcCCCeeech
Q 026021 98 PLHEYKHNLHSIVSFLKNRWPNTLVLLITPPPIDEEARLKHPYVENPTGLPERTNEAAGAYAKACIEVAGECGLPVVDLW 177 (244)
Q Consensus 98 ~~~~~~~~l~~~v~~~~~~~p~~~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~ 177 (244)
..+.|+++++.+-+ ++|...++++-...- +.+..-..+-|++.|+.++=.|
T Consensus 60 dkedfrenireiwe----rypqldvvvivttdd-------------------------kewikdfieeakergvevfvvy 110 (162)
T 2l82_A 60 DKEDFRENIREIWE----RYPQLDVVVIVTTDD-------------------------KEWIKDFIEEAKERGVEVFVVY 110 (162)
T ss_dssp SHHHHHHHHHHHHH----HCTTCCEEEEEECCC-------------------------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHH----hCCCCcEEEEEecCc-------------------------HHHHHHHHHHHHhcCcEEEEEe
Confidence 35677777766655 456655555543111 1222333445677898876555
Q ss_pred hHhhh--hhhcccccccccccCC-hhHHHHHHHHHHHHHhhc
Q 026021 178 TKMQQ--LADWKTAYLSDGLHLN-ETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 178 ~~~~~--~~~~~~~~~~DgiHpn-~~G~~~~a~~l~~~l~~~ 216 (244)
+--.+ .....+.+.+||+.-. -.....+-+.+-..+++.
T Consensus 111 nnkdddrrkeaqqefrsdgvdvrtvsdkeelieqvrrfvrkv 152 (162)
T 2l82_A 111 NNKDDDRRKEAQQEFRSDGVDVRTVSDKEELIEQVRRFVRKV 152 (162)
T ss_dssp ECSCHHHHHHHHHHHCCSSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHhhhcCceeeecCCHHHHHHHHHHHHHHh
Confidence 43222 1223456788888542 223344445555555544
No 255
>1i17_A Mouse doppel, prion-like protein; DPL, unknown function; NMR {Mus musculus} SCOP: d.6.1.1
Probab=21.75 E-value=32 Score=21.90 Aligned_cols=12 Identities=17% Similarity=0.202 Sum_probs=9.0
Q ss_pred cccccccccCCh
Q 026021 188 TAYLSDGLHLNE 199 (244)
Q Consensus 188 ~~~~~DgiHpn~ 199 (244)
.+.++||||.+.
T Consensus 33 YwqFPDgIhY~g 44 (107)
T 1i17_A 33 YWQFPDGIYYEG 44 (107)
T ss_dssp GGGSCSEEECCC
T ss_pred cccCCCcccccc
Confidence 467799999853
No 256
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=21.74 E-value=3.2e+02 Score=22.92 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=30.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEEc
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLIT 126 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~~ 126 (244)
.+++.|++.+ .|.... ..+...+...++++++.+|+..|+..|++-+
T Consensus 120 ~~~~~Vi~eL-~NEP~~--------~~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g 166 (464)
T 1wky_A 120 GKEDTVIINI-ANEWFG--------SWDGAAWADGYKQAIPRLRNAGLNNTLMIDA 166 (464)
T ss_dssp TCTTTEEEEC-CTTCCC--------SSCHHHHHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred CCCCeEEEEe-ccCCCC--------CCCHHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 3456665544 355421 1245678888999999999998875555543
No 257
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=21.72 E-value=2.5e+02 Score=21.72 Aligned_cols=46 Identities=4% Similarity=-0.005 Sum_probs=32.6
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhhCCCceEEEE
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNRWPNTLVLLI 125 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~p~~~vil~ 125 (244)
..|.++.+.+ .|.... ..+.+.+...++++++.+|+..|+..|++-
T Consensus 124 ~~~~v~~~el-~NEP~~--------~~~~~~~~~~~~~~~~~iR~~~p~~~i~v~ 169 (317)
T 3aof_A 124 DYPETLFFEI-LNAPHG--------NLTPEKWNELLEEALKVIRSIDKKHTIIIG 169 (317)
T ss_dssp TSCTTEEEEC-CSSCCT--------TSCHHHHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred CCCCeEEEEe-ccCCCC--------CCCHHHHHHHHHHHHHHHHhhCCCCEEEEC
Confidence 5566666555 466532 135788999999999999999887655554
No 258
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=21.72 E-value=1.8e+02 Score=22.75 Aligned_cols=51 Identities=24% Similarity=0.217 Sum_probs=29.7
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhhCCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
....|+||+..|.-... .....+.+.. .++++++.+++..|++.|+.++.|
T Consensus 73 ~~~aD~Vii~v~~~~~~--------g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np 126 (319)
T 1lld_A 73 CRDADMVVITAGPRQKP--------GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 126 (319)
T ss_dssp GTTCSEEEECCCCCCCT--------TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred hCCCCEEEECCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCc
Confidence 35789999999864431 1112333333 344667777666677766665543
No 259
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=21.72 E-value=2.2e+02 Score=22.99 Aligned_cols=51 Identities=4% Similarity=-0.147 Sum_probs=30.8
Q ss_pred cCCccEEEEEeccCCCCCCCCCCCCcccChhHHHH---HHHHHHHHHHhh-CCCceEEEEcCC
Q 026021 70 RVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKH---NLHSIVSFLKNR-WPNTLVLLITPP 128 (244)
Q Consensus 70 ~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~~~-~p~~~vil~~~~ 128 (244)
....|+|||..|..-- +.....+-+.. -++.+.+.+.+. .|++.|++++.|
T Consensus 98 ~~~advVvi~aG~prk--------pGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRK--------AGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp TTTCSEEEECCCCCCC--------TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hCCCCEEEECCCCCCC--------CCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 4678899988774322 12233344443 455666666665 478888887765
No 260
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=21.59 E-value=1.4e+02 Score=25.10 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhcCCCe-ee
Q 026021 156 GAYAKACIEVAGECGLPV-VD 175 (244)
Q Consensus 156 ~~~~~~~~~~a~~~~v~~-iD 175 (244)
..|-+.++++|+++++.+ +|
T Consensus 240 ~~fL~~lr~lc~~~g~lLI~D 260 (454)
T 4ao9_A 240 PDFLQALRESATQVGALLVFD 260 (454)
T ss_dssp HHHHHHHHHHHHHHTCEEEEE
T ss_pred hhhHHHHHHHHhhcCCEEEEE
Confidence 368899999999999875 45
No 261
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=21.55 E-value=2.7e+02 Score=21.09 Aligned_cols=68 Identities=12% Similarity=0.149 Sum_probs=43.1
Q ss_pred cceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHH
Q 026021 34 VDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFL 113 (244)
Q Consensus 34 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 113 (244)
+.++..|++|.+.. ..+.+ .-|+..++.+|-++.... ...+.++..+.+.+.++.+
T Consensus 3 IgvfDSG~Ggltv~---~~l~~---------------~~P~~~~iy~~D~~~~py------G~~s~~~i~~~~~~~~~~L 58 (254)
T 1b73_A 3 IGIFDSGVGGLTVL---KAIRN---------------RYRKVDIVYLGDTARVPY------GIRSKDTIIRYSLECAGFL 58 (254)
T ss_dssp EEEEESSSGGGTHH---HHHHH---------------HSTTCEEEEEECTTTCCC------TTSCHHHHHHHHHHHHHHH
T ss_pred EEEEECCccHHHHH---HHHHH---------------hCCCCcEEEeecCCCCCC------CcCCHHHHHHHHHHHHHHH
Confidence 45777888886542 22332 334555677776654421 2345777888888888888
Q ss_pred HhhCCCceEEEEcC
Q 026021 114 KNRWPNTLVLLITP 127 (244)
Q Consensus 114 ~~~~p~~~vil~~~ 127 (244)
.+. +++.+++..
T Consensus 59 ~~~--g~d~iviaC 70 (254)
T 1b73_A 59 KDK--GVDIIVVAC 70 (254)
T ss_dssp HTT--TCSEEEECC
T ss_pred HHC--CCCEEEEeC
Confidence 876 456777765
No 262
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=21.34 E-value=61 Score=24.96 Aligned_cols=65 Identities=11% Similarity=0.114 Sum_probs=33.6
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEe
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFF 80 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~ 80 (244)
|||.|+++|+++-. ..|... .+.+...--++..|-+.....- ..+..... .....+|+|..
T Consensus 158 lrP~Vv~FgE~lp~-----~~~~~a-~~~~~~adl~lviGTSl~V~P~--~~l~~~a~-----------~~g~~~i~iN~ 218 (253)
T 1ma3_A 158 VKPRVVLFGEPLPQ-----RTLFEA-IEEAKHCDAFMVVGSSLVVYPA--AELPYIAK-----------KAGAKMIIVNA 218 (253)
T ss_dssp EEEEECCBTSBCCH-----HHHHHH-HHHHHHCSEEEEESCCSCEETG--GGHHHHHH-----------HHTCEEEEEES
T ss_pred ccceEEEeCCCCCH-----HHHHHH-HHHHHhCCEEEEECCCceeccH--HHHHHHHH-----------HcCCeEEEEeC
Confidence 57899999999862 223322 2233222346667766544221 12222222 13455777877
Q ss_pred ccCC
Q 026021 81 GAND 84 (244)
Q Consensus 81 G~ND 84 (244)
+...
T Consensus 219 ~~~~ 222 (253)
T 1ma3_A 219 EPTM 222 (253)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 6543
No 263
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=21.24 E-value=1.6e+02 Score=18.45 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=22.9
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh--CCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR--WPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~--~p~~~vil~~~~ 128 (244)
..||+|++-+..-|. + . -++++.+++. .+.++|++++..
T Consensus 44 ~~~dlvi~D~~l~~~------------~------g-~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 44 NKPDLILMDIQLPEI------------S------G-LEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HCCSEEEEESBCSSS------------B------H-HHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCCEEEEeCCCCCC------------C------H-HHHHHHHHcCccccCCcEEEEECC
Confidence 578999887644332 1 1 1355666654 367788888764
No 264
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=20.94 E-value=2e+02 Score=19.42 Aligned_cols=23 Identities=9% Similarity=0.021 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHhcCCCeeec
Q 026021 154 AAGAYAKACIEVAGECGLPVVDL 176 (244)
Q Consensus 154 ~~~~~~~~~~~~a~~~~v~~iD~ 176 (244)
.-..+.+.+++.++-.++.++|-
T Consensus 87 ~D~~~T~~l~~a~~ll~I~llDH 109 (126)
T 2qlc_A 87 ADKQVTSILKKAGDLLQIELLDH 109 (126)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEeee
Confidence 33467889999999999999994
No 265
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=20.59 E-value=3e+02 Score=21.37 Aligned_cols=69 Identities=17% Similarity=0.320 Sum_probs=42.1
Q ss_pred ccceEeeccCCcchHHHHHHHHhhccccCCCcccccccCCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHH
Q 026021 33 TVDVVLRGYSGYNTRWAVKVMERVLPAANGESESERERVSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSF 112 (244)
Q Consensus 33 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 112 (244)
.+.++..|++|.+ .+..+.+..+ +..++.+|-+..... ...+.++..+.+.++++.
T Consensus 26 ~IGvfDsG~Gglt---v~~~i~~~~P---------------~~~~iy~~D~~~~py------G~~s~~~i~~~~~~~~~~ 81 (290)
T 2vvt_A 26 AIGLIDSGVGGLT---VLKEALKQLP---------------NERLIYLGDTARCPY------GPRPAEQVVQFTWEMADF 81 (290)
T ss_dssp CEEEEESSSTTHH---HHHHHHHHCT---------------TSCEEEEECTTTCCC------TTSCHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCcHHH---HHHHHHHHCC---------------CccEEEecccccCCC------CCCCHHHHHHHHHHHHHH
Confidence 3667878888833 2333333333 223555665554321 234677888888888888
Q ss_pred HHhhCCCceEEEEcC
Q 026021 113 LKNRWPNTLVLLITP 127 (244)
Q Consensus 113 ~~~~~p~~~vil~~~ 127 (244)
+.+. +++.+++..
T Consensus 82 L~~~--g~d~IVIAC 94 (290)
T 2vvt_A 82 LLKK--RIKMLVIAC 94 (290)
T ss_dssp HHTT--TCSEEEECC
T ss_pred HHHC--CCCEEEEeC
Confidence 8876 466777776
No 266
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=20.58 E-value=89 Score=26.61 Aligned_cols=26 Identities=15% Similarity=0.359 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhCCCceEEEEcCC
Q 026021 103 KHNLHSIVSFLKNRWPNTLVLLITPP 128 (244)
Q Consensus 103 ~~~l~~~v~~~~~~~p~~~vil~~~~ 128 (244)
..-+.++++.+++..|++-++.++.|
T Consensus 148 i~i~~~i~~~i~~~~P~A~ii~~TNP 173 (472)
T 1u8x_X 148 IGGVLEILDYMEKYSPDAWMLNYSNP 173 (472)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECCSC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 45688899999999999977777665
No 267
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=20.23 E-value=61 Score=26.45 Aligned_cols=41 Identities=17% Similarity=0.287 Sum_probs=25.6
Q ss_pred CCCeEEEEcccccccccCCCChHHHHHHhhccccceEeeccCCcchH
Q 026021 1 MRPKIYLFGDSITESSFTYGGWGASLAHHFSRTVDVVLRGYSGYNTR 47 (244)
Q Consensus 1 ~~~~il~iGDSit~~g~~~~~~~~~l~~~~~~~~~v~n~g~~G~~~~ 47 (244)
|||.|+++|+++- ..+...+.+.....--++..|.|..+..
T Consensus 230 lrPdVV~FGE~lp------~~~~~~a~~~~~~aDllLviGTSL~V~P 270 (354)
T 2hjh_A 230 LKPDITFFGEALP------NKFHKSIREDILECDLLICIGTSLKVAP 270 (354)
T ss_dssp EEEEECCBTSBCC------HHHHHHHHHHTTTCCEEEEESCCCCEET
T ss_pred eCCChhhccccCC------HHHHHHHHHHHhhCCEEEEECcCCCchh
Confidence 4788999999886 2233444444443334777788876543
No 268
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=20.04 E-value=1.9e+02 Score=18.71 Aligned_cols=39 Identities=3% Similarity=-0.134 Sum_probs=23.1
Q ss_pred CCccEEEEEeccCCCCCCCCCCCCcccChhHHHHHHHHHHHHHHhh-CCCceEEEEcCC
Q 026021 71 VSTIAVAVFFGANDACLPDRCGAFQHVPLHEYKHNLHSIVSFLKNR-WPNTLVLLITPP 128 (244)
Q Consensus 71 ~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~-~p~~~vil~~~~ 128 (244)
..||+|++-+..-+. +- -++++.+++. .+.++|++++..
T Consensus 51 ~~~dlvllD~~mp~~------------~G-------~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKV------------DG-------LLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSS------------CH-------HHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCC------------Ch-------HHHHHHHHhhcCCCCCEEEEECC
Confidence 578999885533222 11 1455666653 456778888774
No 269
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=20.01 E-value=3.3e+02 Score=21.62 Aligned_cols=117 Identities=9% Similarity=0.034 Sum_probs=64.9
Q ss_pred ChhHHHHHHHHHHHHHHhhC--CCceEEEEcCCCCChhhhh---------------cCCC-CCCCCCCCccchHHHHHHH
Q 026021 98 PLHEYKHNLHSIVSFLKNRW--PNTLVLLITPPPIDEEARL---------------KHPY-VENPTGLPERTNEAAGAYA 159 (244)
Q Consensus 98 ~~~~~~~~l~~~v~~~~~~~--p~~~vil~~~~~~~~~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~~ 159 (244)
..+.+...+...++.+|+.. |+++|++-...+.+..... .+.. +-+.+.. .........+.
T Consensus 150 ~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~-w~~~~~~~~l~ 228 (334)
T 1fob_A 150 SYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPF-YSASATLASLK 228 (334)
T ss_dssp CHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSS-SCTTCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCCcCchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCC-cCCCCCHHHHH
Confidence 46788889999999999998 8888776655433211100 1100 1111111 11112345667
Q ss_pred HHHHHHHHhcCCCeee--chhHhhhhhhccccc--ccccccCChhHHHHHHHHHHHHHhhc
Q 026021 160 KACIEVAGECGLPVVD--LWTKMQQLADWKTAY--LSDGLHLNETGNRVVFEEVVMKLKTE 216 (244)
Q Consensus 160 ~~~~~~a~~~~v~~iD--~~~~~~~~~~~~~~~--~~DgiHpn~~G~~~~a~~l~~~l~~~ 216 (244)
..+++++++++-+++= .--.... ......+ ..++.-.|++|+..+-..+++.+.+.
T Consensus 229 ~~l~~~~~rygKpv~itEtG~~~~~-d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~~ 288 (334)
T 1fob_A 229 TSLANLQSTYDKPVVVVETNWPVSC-PNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEAT 288 (334)
T ss_dssp HHHHHHHHHHCCCEEEEECCCCSBC-SSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCEEEEEcccccCC-CCccccccccccCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7788887777666532 2111110 0000000 01467789999999988888888765
Done!