Your job contains 1 sequence.
>026025
MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW
ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS
GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI
FCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVGIFSQPNLMMEHSCR
SSSQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026025
(244 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2177058 - symbol:RGTB1 "RAB geranylgeranyl tra... 1008 1.1e-101 1
TAIR|locus:2088614 - symbol:RGTB2 "RAB geranylgeranyl tra... 983 5.0e-99 1
UNIPROTKB|P53611 - symbol:RABGGTB "Geranylgeranyl transfe... 781 1.3e-77 1
ZFIN|ZDB-GENE-040426-2116 - symbol:rabggtb "Rab geranylge... 781 1.3e-77 1
UNIPROTKB|F1P6X0 - symbol:RABGGTB "Uncharacterized protei... 775 5.5e-77 1
UNIPROTKB|G8JKY6 - symbol:RABGGTB "Geranylgeranyl transfe... 774 7.1e-77 1
UNIPROTKB|Q5E9B3 - symbol:RABGGTB "Geranylgeranyl transfe... 774 7.1e-77 1
MGI|MGI:99537 - symbol:Rabggtb "RAB geranylgeranyl transf... 770 1.9e-76 1
RGD|3530 - symbol:Rabggtb "Rab geranylgeranyltransferase,... 769 2.4e-76 1
UNIPROTKB|F1LSM6 - symbol:Rabggtb "Geranylgeranyl transfe... 769 2.4e-76 1
UNIPROTKB|F1M052 - symbol:Rabggtb "Geranylgeranyl transfe... 761 1.7e-75 1
DICTYBASE|DDB_G0290671 - symbol:rabggtb "protein geranylg... 748 4.0e-74 1
UNIPROTKB|F1P4E5 - symbol:RABGGTB "Uncharacterized protei... 745 8.4e-74 1
FB|FBgn0028970 - symbol:betaggt-II "beta subunit of type ... 657 1.8e-64 1
ASPGD|ASPL0000011885 - symbol:AN3747 species:162425 "Emer... 647 2.0e-63 1
POMBASE|SPAC167.02 - symbol:ptb1 "geranylgeranyltransfera... 633 6.2e-62 1
WB|WBGene00015099 - symbol:ggtb-1 species:6239 "Caenorhab... 624 5.5e-61 1
UNIPROTKB|G4MQQ5 - symbol:MGG_09304 "Type-2 protein geran... 615 5.0e-60 1
SGD|S000006380 - symbol:BET2 "Beta subunit of Type II ger... 596 5.1e-58 1
CGD|CAL0000126 - symbol:BET2 species:5476 "Candida albica... 509 8.5e-49 1
UNIPROTKB|Q5T4U8 - symbol:RABGGTB "Geranylgeranyl transfe... 387 7.2e-36 1
UNIPROTKB|F1S9R0 - symbol:RABGGTB "Uncharacterized protei... 372 2.8e-34 1
POMBASE|SPAC17G6.04c - symbol:cpp1 "protein farnesyltrans... 320 9.1e-29 1
ZFIN|ZDB-GENE-030131-2220 - symbol:fntb "farnesyltransfer... 296 3.2e-26 1
UNIPROTKB|B4E1A0 - symbol:CHURC1-FNTB "cDNA FLJ58825, hig... 294 5.2e-26 1
UNIPROTKB|P49356 - symbol:FNTB "Protein farnesyltransfera... 294 5.9e-26 1
UNIPROTKB|B4DL54 - symbol:CHURC1-FNTB "cDNA FLJ59570, hig... 294 1.1e-25 1
UNIPROTKB|H0YHI0 - symbol:CHURC1-FNTB "Protein CHURC1-FNT... 294 1.1e-25 1
UNIPROTKB|D3DQ78 - symbol:RABGGTB "Geranylgeranyl transfe... 288 2.2e-25 1
MGI|MGI:1861305 - symbol:Fntb "farnesyltransferase, CAAX ... 288 3.1e-25 1
RGD|620119 - symbol:Fntb "farnesyltransferase, CAAX box, ... 288 3.1e-25 1
UNIPROTKB|Q02293 - symbol:Fntb "Protein farnesyltransfera... 288 3.1e-25 1
GENEDB_PFALCIPARUM|PFF0120w - symbol:PFF0120w "putative g... 286 3.6e-25 1
UNIPROTKB|F1Q0W7 - symbol:FNTB "Uncharacterized protein" ... 287 4.0e-25 1
UNIPROTKB|P49355 - symbol:FNTB "Protein farnesyltransfera... 285 7.0e-25 1
TAIR|locus:2173802 - symbol:ERA1 "ENHANCED RESPONSE TO AB... 275 1.7e-23 1
WB|WBGene00006465 - symbol:fntb-1 species:6239 "Caenorhab... 268 3.3e-23 1
UNIPROTKB|Q19752 - symbol:fntb-1 "Protein FNTB-1" species... 268 3.3e-23 1
DICTYBASE|DDB_G0270948 - symbol:fntB "protein farnesyltra... 270 7.3e-23 1
UNIPROTKB|F1SA56 - symbol:CHURC1-FNTB "Uncharacterized pr... 257 4.3e-22 1
TAIR|locus:2039752 - symbol:PGGT-I species:3702 "Arabidop... 213 4.5e-22 2
UNIPROTKB|F1NE58 - symbol:PGGT1B "Uncharacterized protein... 185 1.5e-20 2
FB|FBgn0038424 - symbol:CG17565 species:7227 "Drosophila ... 246 1.6e-20 1
ASPGD|ASPL0000050108 - symbol:AN2002 species:162425 "Emer... 212 4.8e-19 2
GENEDB_PFALCIPARUM|PF11_0483 - symbol:PF11_0483 "farnesyl... 234 2.1e-18 1
UNIPROTKB|Q8IHP6 - symbol:PF11_0483 "Farnesyltransferase ... 234 2.1e-18 1
SGD|S000002248 - symbol:RAM1 "Beta subunit of the CAAX fa... 223 6.6e-18 1
RGD|621754 - symbol:Pggt1b "protein geranylgeranyltransfe... 168 6.0e-17 2
UNIPROTKB|P53610 - symbol:Pggt1b "Geranylgeranyl transfer... 168 6.0e-17 2
MGI|MGI:1917514 - symbol:Pggt1b "protein geranylgeranyltr... 167 8.8e-17 2
UNIPROTKB|F1N4H5 - symbol:PGGT1B "Geranylgeranyl transfer... 164 2.9e-16 2
UNIPROTKB|Q5EAD5 - symbol:PGGT1B "Geranylgeranyl transfer... 164 2.9e-16 2
UNIPROTKB|P53609 - symbol:PGGT1B "Geranylgeranyl transfer... 163 4.5e-16 2
ZFIN|ZDB-GENE-050913-85 - symbol:pggt1b "protein geranylg... 165 8.0e-16 2
UNIPROTKB|E2QZU5 - symbol:PGGT1B "Uncharacterized protein... 157 3.7e-15 2
FB|FBgn0015000 - symbol:betaggt-I "beta subunit of type I... 178 7.5e-15 2
DICTYBASE|DDB_G0269726 - symbol:pggt1b "protein geranylge... 171 1.8e-14 2
UNIPROTKB|F1RLE8 - symbol:PGGT1B "Uncharacterized protein... 164 6.1e-13 2
UNIPROTKB|O18197 - symbol:Y48E1B.3 "Protein Y48E1B.3, iso... 170 3.6e-11 1
WB|WBGene00013002 - symbol:Y48E1B.3 species:6239 "Caenorh... 160 4.4e-09 1
POMBASE|SPAC2E1P5.04c - symbol:cwg2 "geranylgeranyltransf... 117 9.7e-08 2
SGD|S000003123 - symbol:CDC43 "Beta subunit of geranylger... 120 7.3e-05 1
>TAIR|locus:2177058 [details] [associations]
symbol:RGTB1 "RAB geranylgeranyl transferase beta subunit
1" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 HSSP:Q08603
EMBL:BT004816 EMBL:BT004818 EMBL:AK227802 IPI:IPI00534125
RefSeq:NP_568259.1 UniGene:At.46789 ProteinModelPortal:Q84J75
STRING:Q84J75 PaxDb:Q84J75 PRIDE:Q84J75 EnsemblPlants:AT5G12210.1
GeneID:831094 KEGG:ath:AT5G12210 TAIR:At5g12210 InParanoid:Q84J75
OMA:ADSICEY PhylomeDB:Q84J75 ProtClustDB:PLN03201
Genevestigator:Q84J75 Uniprot:Q84J75
Length = 321
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 180/225 (80%), Positives = 205/225 (91%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
M +L ADKHV+YI+ EKKK+SFESVVM+HLR+NGAYWGLTTLD+L KL V EE+VISW
Sbjct: 9 MVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISW 68
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
++ CQ ESGGFAGN GHDPH+LYTLSAVQ+LALFDK++ILD KVS+Y+ LQNEDGSFS
Sbjct: 69 LMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFS 128
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI 180
GD+WGE+DTRFSYIAICCLSIL+ LDKINV+KAV+YIVSCKNLDGGFGCTPG ESH+GQI
Sbjct: 129 GDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQI 188
Query: 181 FCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
FCCVGALAI G+LHHVDKD LGWWLCERQ+K+GGLNGRPEKL DV
Sbjct: 189 FCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADV 233
Score = 151 (58.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 37/155 (23%), Positives = 73/155 (47%)
Query: 12 YIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGF 71
Y+ ++ + SF + + +Y + L IL LD ++ E + +I+ C++ GGF
Sbjct: 116 YVAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGF 175
Query: 72 AGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRF 131
G + H V LA+ + +D D + ++ Q + G +G D +
Sbjct: 176 GCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCY 235
Query: 132 SYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGG 166
S+ + L ++ R+ I+ K V++I+ C++LD G
Sbjct: 236 SWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNG 270
Score = 144 (55.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 42/184 (22%), Positives = 86/184 (46%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + K++ +D V S++ K Q+E G F+G++ + ++ A+ L++ +D ++
Sbjct: 99 LALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINV 158
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K YIV +N DG F E + + L+I L ++ D ++ +
Sbjct: 159 EKAVKYIVSCKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQL 218
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEK 221
GG P + + + +L + +H +DK L ++ + Q + +GG++ RPE
Sbjct: 219 KAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPED 278
Query: 222 LPDV 225
D+
Sbjct: 279 AVDI 282
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 36/144 (25%), Positives = 64/144 (44%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+ ++ +K VKYI+S + F + + L I G L VD++ + W
Sbjct: 153 LDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWW 212
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNED-GSF 119
+ + Q ++GG G V Y+ + L + D+V +D K+ +I+ Q+ D G
Sbjct: 213 LCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGI 272
Query: 120 SGDIWGEVDTRFSYIAICCLSILQ 143
S VD +Y + LS+L+
Sbjct: 273 SDRPEDAVDIFHTYFGVAGLSLLE 296
>TAIR|locus:2088614 [details] [associations]
symbol:RGTB2 "RAB geranylgeranyl transferase beta subunit
2" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002686 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AP002040
EMBL:AC069473 EMBL:AP002063 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 OMA:ERQDYES HSSP:Q08603 ProtClustDB:PLN03201
EMBL:BT028896 IPI:IPI00545274 RefSeq:NP_187814.1 RefSeq:NP_850567.1
UniGene:At.39649 ProteinModelPortal:Q9LHL5 SMR:Q9LHL5
EnsemblPlants:AT3G12070.1 EnsemblPlants:AT3G12070.2 GeneID:820381
KEGG:ath:AT3G12070 TAIR:At3g12070 InParanoid:Q9LHL5
PhylomeDB:Q9LHL5 Genevestigator:Q9LHL5 Uniprot:Q9LHL5
Length = 317
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 180/226 (79%), Positives = 205/226 (90%)
Query: 3 ELAADKHVKYIISV--EKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+L A KH++YI+++ EKKK+SFESVVM+HLR+NGAYWGLTTL +L KL +V E++V+SW
Sbjct: 4 KLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSW 63
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
++ CQ ESGGFAGN GHDPHVLYTLSAVQ+LALFDK++ILD +KVSNYI GLQNEDGSFS
Sbjct: 64 VMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFS 123
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI 180
GDIWGEVDTRFSYIAICCLSIL+ LDKINV KAV+YIVSCKNLDGGFGC+PG ESH+GQI
Sbjct: 124 GDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQI 183
Query: 181 FCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDV 225
FCCVGALAI G LH VDKDLLGWWLCERQ +SGGLNGRPEKLPDV
Sbjct: 184 FCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDV 229
Score = 149 (57.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/227 (20%), Positives = 103/227 (45%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+G ++ D+ V ++++ + + F + + L + KL+ +D E V ++
Sbjct: 52 LGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNY 111
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
I Q+E G F+G+I + ++ A+ L++ +D ++ K +YIV +N DG F
Sbjct: 112 IAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFG 171
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQ 179
E + + L+I L +++ D ++ ++ + GG P
Sbjct: 172 CSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCY 231
Query: 180 IFCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDV 225
+ + +L + +H ++K L ++ + Q + +GG++ RP D+
Sbjct: 232 SWWVLSSLIMIDRVHWIEKAKLVKFILDSQDMDNGGISDRPSYTVDI 278
>UNIPROTKB|P53611 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=NAS] [GO:0007601 "visual perception" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0007601 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 CTD:5876 HOVERGEN:HBG008182
OrthoDB:EOG4V6ZGV EMBL:U49245 EMBL:X98001 EMBL:Y08201 EMBL:BC020790
IPI:IPI00295849 PIR:G02431 RefSeq:NP_004573.2 UniGene:Hs.78948
ProteinModelPortal:P53611 SMR:P53611 IntAct:P53611 MINT:MINT-260716
STRING:P53611 PhosphoSite:P53611 DMDM:2506788 PaxDb:P53611
PRIDE:P53611 Ensembl:ENST00000319942 GeneID:5876 KEGG:hsa:5876
UCSC:uc001dgy.1 GeneCards:GC01P076251 HGNC:HGNC:9796 HPA:HPA026585
HPA:HPA027167 MIM:179080 neXtProt:NX_P53611 PharmGKB:PA34157
InParanoid:P53611 PhylomeDB:P53611 BRENDA:2.5.1.60 BindingDB:P53611
ChEMBL:CHEMBL2338 ChiTaRS:RABGGTB GenomeRNAi:5876 NextBio:22832
ArrayExpress:P53611 Bgee:P53611 CleanEx:HS_RABGGTB
Genevestigator:P53611 Uniprot:P53611
Length = 331
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 131/222 (59%), Positives = 175/222 (78%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ GLQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 239
Score = 178 (67.7 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 44/167 (26%), Positives = 84/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
+K V+Y+ ++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 117 NKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 177 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 236
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 237 PDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPG 283
Score = 159 (61.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + ++ +D V+ ++ Q E G FAG+I + ++ AV LAL K+D ++
Sbjct: 105 LTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K +++ N DG F E Y L+I +L ++N D ++ +
Sbjct: 165 EKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQL 224
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPE 220
GG P + + +L I G LH +D++ L ++ C+ + ++GG RP
Sbjct: 225 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDE-ETGGFADRPG 283
Query: 221 KLPD 224
+ D
Sbjct: 284 DMVD 287
>ZFIN|ZDB-GENE-040426-2116 [details] [associations]
symbol:rabggtb "Rab geranylgeranyltransferase,
beta subunit" species:7955 "Danio rerio" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
ZFIN:ZDB-GENE-040426-2116 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:CT027702
EMBL:BC097066 IPI:IPI00613192 RefSeq:NP_998277.2 UniGene:Dr.79075
SMR:Q4V946 STRING:Q4V946 Ensembl:ENSDART00000099248 GeneID:406386
KEGG:dre:406386 InParanoid:Q4V946 NextBio:20817996 Uniprot:Q4V946
Length = 331
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 132/222 (59%), Positives = 174/222 (78%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L DKH YI + KKD +E + E+LR++G YWGLT +D++G+L ++ E++I +I
Sbjct: 18 LFLDKHADYIAAYGSKKDDYEYTLSEYLRMSGIYWGLTVMDLMGQLSRMNREEIIEFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ + GG + +IGHDPH+LYTLSA+Q+L+L+D V+ +D DKV Y+ GLQ EDGSF+GD
Sbjct: 78 CQHDCGGISASIGHDPHLLYTLSAIQILSLYDSVNAIDVDKVVEYVKGLQQEDGSFAGDK 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INVDKAVE+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G L++ G LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 198 TGFLSVTGQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDV 239
Score = 167 (63.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + ++A+D + V+ ++ Q E G FAG+ + ++ AV LAL K+D+++
Sbjct: 105 LSLYDSVNAIDVDKVVEYVKGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDVINV 164
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
DK +++ N DG F E Y LS+ +L ++N D ++ +
Sbjct: 165 DKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCCTGFLSVTGQLHQVNADLLGWWLCERQL 224
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDK-DLLGWWLCERQVKSGGLNGRPEK 221
GG P + + +L I G +H +DK L + L + ++GG RP
Sbjct: 225 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWIDKAKLRNFILACQDEETGGFADRPGD 284
Query: 222 LPD 224
+ D
Sbjct: 285 MVD 287
Score = 157 (60.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/167 (23%), Positives = 81/167 (48%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
DK V+Y+ ++++ SF + ++ + TL +LGKLD ++ + + +++ C +
Sbjct: 117 DKVVEYVKGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMN 176
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H L++ ++ ++AD + ++ Q G +G
Sbjct: 177 FDGGFGCRPGSESHAGQIYCCTGFLSVTGQLHQVNADLLGWWLCERQLPSGGLNGRPEKL 236
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ R+ I+ K +I++C++ + GGF PG
Sbjct: 237 PDVCYSWWVLASLKIIGRIHWIDKAKLRNFILACQDEETGGFADRPG 283
>UNIPROTKB|F1P6X0 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AAEX03004896 Ensembl:ENSCAFT00000032473 Uniprot:F1P6X0
Length = 331
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 130/222 (58%), Positives = 174/222 (78%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 239
Score = 182 (69.1 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 45/167 (26%), Positives = 85/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
+K V+Y+ S++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 117 NKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 177 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 236
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 237 PDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 283
Score = 162 (62.1 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + ++ +D V+ ++ Q E G FAG+I + ++ AV LAL K+D ++
Sbjct: 105 LTLYDSINVIDVNKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K +++ N DG F E Y L+I +L ++N D ++ +
Sbjct: 165 EKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQL 224
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPE 220
GG P + + +L I G LH +D++ L ++ C+ + ++GG RP
Sbjct: 225 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDE-ETGGFADRPG 283
Query: 221 KLPD 224
+ D
Sbjct: 284 DMVD 287
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + S+IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 242 SWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>UNIPROTKB|G8JKY6 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:DAAA02008284 Ensembl:ENSBTAT00000024551 Uniprot:G8JKY6
Length = 331
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 130/222 (58%), Positives = 174/222 (78%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 239
Score = 182 (69.1 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 45/167 (26%), Positives = 85/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
+K V+Y+ S++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 117 NKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 177 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 236
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 237 PDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 283
Score = 161 (61.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + ++ +D V+ ++ Q E G FAG+I + ++ AV LAL K+D ++
Sbjct: 105 LTLYDSINVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K +++ N DG F E Y L+I +L ++N D ++ +
Sbjct: 165 EKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQL 224
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPE 220
GG P + + +L I G LH +D++ L ++ C+ + ++GG RP
Sbjct: 225 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDE-ETGGFADRPG 283
Query: 221 KLPD 224
+ D
Sbjct: 284 DMVD 287
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + S+IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 242 SWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>UNIPROTKB|Q5E9B3 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 EMBL:BT021007
EMBL:BC147953 IPI:IPI00705500 RefSeq:NP_001015646.1
UniGene:Bt.20263 ProteinModelPortal:Q5E9B3 SMR:Q5E9B3 STRING:Q5E9B3
PRIDE:Q5E9B3 GeneID:533276 KEGG:bta:533276 CTD:5876
HOVERGEN:HBG008182 InParanoid:Q5E9B3 OrthoDB:EOG4V6ZGV
NextBio:20875982 Uniprot:Q5E9B3
Length = 331
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 130/222 (58%), Positives = 174/222 (78%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 239
Score = 182 (69.1 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 45/167 (26%), Positives = 85/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
+K V+Y+ S++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 117 NKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 177 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 236
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 237 PDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 283
Score = 161 (61.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + ++ +D V+ ++ Q E G FAG+I + ++ AV LAL K+D ++
Sbjct: 105 LTLYDSINVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K +++ N DG F E Y L+I +L ++N D ++ +
Sbjct: 165 EKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQL 224
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPE 220
GG P + + +L I G LH +D++ L ++ C+ + ++GG RP
Sbjct: 225 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDE-ETGGFADRPG 283
Query: 221 KLPD 224
+ D
Sbjct: 284 DMVD 287
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + S+IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 242 SWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>MGI|MGI:99537 [details] [associations]
symbol:Rabggtb "RAB geranylgeranyl transferase, b subunit"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 MGI:MGI:99537 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 EMBL:CH466532 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
PDB:3PZ1 PDB:3PZ2 PDB:3PZ3 PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:U12922
EMBL:BC132473 EMBL:BC138547 IPI:IPI00133505 PIR:I49116 PIR:JC6177
RefSeq:NP_035361.2 UniGene:Mm.277831 ProteinModelPortal:P53612
SMR:P53612 STRING:P53612 PhosphoSite:P53612 PaxDb:P53612
PRIDE:P53612 Ensembl:ENSMUST00000167111 GeneID:19352 KEGG:mmu:19352
InParanoid:A2RTE6 EvolutionaryTrace:P53612 NextBio:296383
Bgee:P53612 CleanEx:MM_RABGGTB Genevestigator:P53612
GermOnline:ENSMUSG00000038975 Uniprot:P53612
Length = 339
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 131/222 (59%), Positives = 172/222 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++ +I
Sbjct: 26 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKS 85
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D V +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 86 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDI 145
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 146 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 205
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 206 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 247
Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 46/167 (27%), Positives = 84/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
DK V Y+ S++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 125 DKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 184
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 185 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 244
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 245 PDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 291
Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 48/190 (25%), Positives = 88/190 (46%)
Query: 40 LTTLDILGKLDAV---DEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDK 96
L+ + IL D+V + + V++++ Q E G FAG+I + ++ AV LAL K
Sbjct: 107 LSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK 166
Query: 97 VDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEY 156
+D ++ +K +++ N DG F E Y L+I +L ++N D +
Sbjct: 167 LDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWW 226
Query: 157 IVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGG 214
+ + GG P + + +L I G LH +D++ L ++ C+ + ++GG
Sbjct: 227 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDE-ETGG 285
Query: 215 LNGRPEKLPD 224
RP + D
Sbjct: 286 FADRPGDMVD 295
Score = 111 (44.1 bits), Expect = 0.00067, P = 0.00067
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + S+IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 250 SWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 309
>RGD|3530 [details] [associations]
symbol:Rabggtb "Rab geranylgeranyltransferase, beta subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IDA] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001330 InterPro:IPR026873
Pfam:PF00432 RGD:3530 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV CTD:5876 HOVERGEN:HBG008182 EMBL:L10416
EMBL:S62097 IPI:IPI00421632 PIR:B45977 RefSeq:NP_619715.1
UniGene:Rn.107818 ProteinModelPortal:Q08603 SMR:Q08603 DIP:DIP-6138N
STRING:Q08603 PRIDE:Q08603 GeneID:25533 KEGG:rno:25533
InParanoid:Q08603 EvolutionaryTrace:Q08603 NextBio:607037
ArrayExpress:Q08603 Genevestigator:Q08603
GermOnline:ENSRNOG00000009992 Uniprot:Q08603
Length = 331
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 130/222 (58%), Positives = 173/222 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 239
Score = 185 (70.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 46/167 (27%), Positives = 84/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
DK V Y+ S++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 117 DKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 177 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 236
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 237 PDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 283
Score = 158 (60.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/184 (23%), Positives = 84/184 (45%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + + ++ + V++++ Q E G FAG+I + ++ AV LAL K+D ++
Sbjct: 105 LTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K +++ N DG F E Y L+I +L ++N D ++ +
Sbjct: 165 EKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQL 224
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPE 220
GG P + + +L I G LH +D++ L ++ C+ + ++GG RP
Sbjct: 225 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDE-ETGGFADRPG 283
Query: 221 KLPD 224
+ D
Sbjct: 284 DMVD 287
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + S+IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 242 SWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>UNIPROTKB|F1LSM6 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 PANTHER:PTHR11774:SF5 IPI:IPI00421632
PRIDE:F1LSM6 Ensembl:ENSRNOT00000065997 ArrayExpress:F1LSM6
Uniprot:F1LSM6
Length = 331
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 130/222 (58%), Positives = 173/222 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 239
Score = 185 (70.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 46/167 (27%), Positives = 84/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
DK V Y+ S++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 117 DKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 177 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 236
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 237 PDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 283
Score = 158 (60.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/184 (23%), Positives = 84/184 (45%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + + ++ + V++++ Q E G FAG+I + ++ AV LAL K+D ++
Sbjct: 105 LTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K +++ N DG F E Y L+I +L ++N D ++ +
Sbjct: 165 EKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQL 224
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPE 220
GG P + + +L I G LH +D++ L ++ C+ + ++GG RP
Sbjct: 225 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDE-ETGGFADRPG 283
Query: 221 KLPD 224
+ D
Sbjct: 284 DMVD 287
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + S+IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 242 SWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>UNIPROTKB|F1M052 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 IPI:IPI00951311 Ensembl:ENSRNOT00000013660
ArrayExpress:F1M052 Uniprot:F1M052
Length = 337
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 130/222 (58%), Positives = 173/222 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I
Sbjct: 25 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKS 84
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 85 CQHE-GGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDI 143
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 144 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 203
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 204 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDV 245
Score = 185 (70.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 46/167 (27%), Positives = 84/167 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
DK V Y+ S++K+ SF + + ++ + TL +LGKLDA++ E I ++L C +
Sbjct: 123 DKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 182
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ ++ +++D + ++ Q G +G
Sbjct: 183 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 242
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L I+ RL I+ +K +I++C++ + GGF PG
Sbjct: 243 PDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 289
Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/184 (23%), Positives = 84/184 (45%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA 102
L + + ++ + V++++ Q E G FAG+I + ++ AV LAL K+D ++
Sbjct: 111 LTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 170
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+K +++ N DG F E Y L+I +L ++N D ++ +
Sbjct: 171 EKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQL 230
Query: 163 LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPE 220
GG P + + +L I G LH +D++ L ++ C+ + ++GG RP
Sbjct: 231 PSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDE-ETGGFADRPG 289
Query: 221 KLPD 224
+ D
Sbjct: 290 DMVD 293
Score = 111 (44.1 bits), Expect = 0.00066, P = 0.00066
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + S+IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 248 SWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 307
>DICTYBASE|DDB_G0290671 [details] [associations]
symbol:rabggtb "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018344
"protein geranylgeranylation" evidence=IEA;ISS] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
dictyBase:DDB_G0290671 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GenomeReviews:CM000154_GR EMBL:AAFI02000164
eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_001733035.1
ProteinModelPortal:B0G172 SMR:B0G172 STRING:B0G172
EnsemblProtists:DDB0233949 GeneID:8627741 KEGG:ddi:DDB_G0290671
Uniprot:B0G172
Length = 339
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 136/222 (61%), Positives = 169/222 (76%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L DKHV+YI+ + KKDSFE V EH+R+NG YWGL++L +L LD +D+ +VI W+L
Sbjct: 22 LLIDKHVEYIVKLGSKKDSFEYWVTEHIRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLS 81
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ +GGF GN HD H+L TLSAVQ+L +D +D +D + V +Y+V LQ EDGSF GD
Sbjct: 82 CQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDYVVKLQREDGSFVGDQ 141
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGEVDTRFSY AI CLS+L+ LDKIN +KAVEYI+SC+N DGGFG PG ESH+GQIF C
Sbjct: 142 WGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTC 201
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
VGAL+I ++ +D D LGWWL ERQ+ +GGLNGRPEK DV
Sbjct: 202 VGALSILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKSSDV 243
Score = 211 (79.3 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 59/228 (25%), Positives = 109/228 (47%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+ +L ++ +++++S +K F L + L LD +D V+ +
Sbjct: 67 LDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDY 126
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
++K Q E G F G+ + ++ +A+ L+L +D ++ +K YI+ QN DG F
Sbjct: 127 VVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGF- 185
Query: 121 GDIWGEVDTRFSYIAIC--CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
G I G ++ I C LSIL ++KI++DK ++ + +GG P S
Sbjct: 186 GSIPG-AESHAGQIFTCVGALSILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKSSDVC 244
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQV-KSGGLNGRPEKLPDV 225
+ + AL+ LH +D D L ++ + Q ++GG+ +P +PDV
Sbjct: 245 YSWWVLSALSAIDRLHWIDNDKLKSYILKCQDNETGGIADKPGDIPDV 292
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/167 (25%), Positives = 81/167 (48%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+ ++ +K V+YI+S + F S+ + + L IL +++ +D + + W
Sbjct: 163 LDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALSILNEINKIDIDKLGWW 222
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQ-NEDGSF 119
+ + Q +GG G V Y+ + L+ D++ +D DK+ +YI+ Q NE G
Sbjct: 223 LSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWIDNDKLKSYILKCQDNETGGI 282
Query: 120 SGDIWGEV-DTRFSYIAICCLSILQRL-DKI-NVDKAVEYIVSCKNL 163
+ D G++ D ++ IC LS++ D+I ++D Y + K L
Sbjct: 283 A-DKPGDIPDVFHTFFGICGLSLMGYFKDQIESIDPV--YALGTKTL 326
>UNIPROTKB|F1P4E5 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AADN02012381 IPI:IPI00594865 Ensembl:ENSGALT00000018575
Uniprot:F1P4E5
Length = 343
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 126/222 (56%), Positives = 172/222 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L ++KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++++I
Sbjct: 30 LLSEKHADYIASYGTKKDDYEYCMSEYLRMSGVYWGLTAMDLMGQLHRMNKEEILAFIKS 89
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L++ + ++D +K+ Y+ LQ EDGSF+GD
Sbjct: 90 CQHECGGISASIGHDPHLLYTLSAVQILILYESLHVVDVNKIVEYVQSLQKEDGSFAGDK 149
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A L++L +LD I+V KAVE+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 150 WGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCC 209
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G LAI LH ++ DLLGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 210 TGFLAITDQLHQINVDLLGWWLCERQLPSGGLNGRPEKLPDV 251
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 44/167 (26%), Positives = 82/167 (49%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
+K V+Y+ S++K+ SF + ++ TL +LGKLDA+D + ++L C +
Sbjct: 129 NKIVEYVQSLQKEDGSFAGDKWGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMN 188
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H LA+ D++ ++ D + ++ Q G +G
Sbjct: 189 FDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQINVDLLGWWLCERQLPSGGLNGRPEKL 248
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
D +S+ + L ++ RL I+ +K +I++C++ + GGF PG
Sbjct: 249 PDVCYSWWVLASLKMIGRLHWIDREKLRCFILACQDEETGGFADRPG 295
Score = 155 (59.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 49 LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNY 108
L VD ++ ++ Q E G FAG+ + ++ A LAL K+D +D K +
Sbjct: 123 LHVVDVNKIVEYVQSLQKEDGSFAGDKWGEIDTRFSFCAAATLALLGKLDAIDVGKAVEF 182
Query: 109 IVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFG 168
++ N DG F E Y L+I +L +INVD ++ + GG
Sbjct: 183 VLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQINVDLLGWWLCERQLPSGGLN 242
Query: 169 CTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPEKLPD 224
P + + +L + G LH +D++ L ++ C+ + ++GG RP + D
Sbjct: 243 GRPEKLPDVCYSWWVLASLKMIGRLHWIDREKLRCFILACQDE-ETGGFADRPGDMVD 299
>FB|FBgn0028970 [details] [associations]
symbol:betaggt-II "beta subunit of type II geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=NAS]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 EMBL:AE014134
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0004662
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 EMBL:AF133269 EMBL:AY060784
RefSeq:NP_524894.1 UniGene:Dm.1765 HSSP:Q08603 SMR:Q9XZ68
IntAct:Q9XZ68 MINT:MINT-777402 STRING:Q9XZ68
EnsemblMetazoa:FBtr0077631 GeneID:47757 KEGG:dme:Dmel_CG18627
UCSC:CG18627-RA CTD:47757 FlyBase:FBgn0028970 InParanoid:Q9XZ68
OrthoDB:EOG41VHJN GenomeRNAi:47757 NextBio:839096 Uniprot:Q9XZ68
Length = 347
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 118/221 (53%), Positives = 166/221 (75%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ-D 66
KHV+YI + K++D +E + E LR++G YWG T LDI+G+L+ ++ + +I ++ +CQ
Sbjct: 33 KHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRCQCP 92
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
+GGFA GHDPH+LYTLSA+Q+L +D ++ +D + V ++VGLQ DGSF GD WGE
Sbjct: 93 NTGGFAPCEGHDPHLLYTLSAIQILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKWGE 152
Query: 127 VDTRFSYIAICCLSILQRLDK-INVDKAVEYIVSCKN-LDGGFGCTPGGESHSGQIFCCV 184
VDTRFS+ A+ L++L R+++ I+V+KAV++++SC N DGGFG PG ESH+G I+CCV
Sbjct: 153 VDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCV 212
Query: 185 GALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
G ++ LH +D D LGWWLCERQ+ SGGLNGRPEKLPDV
Sbjct: 213 GFFSLTHRLHLLDVDKLGWWLCERQLPSGGLNGRPEKLPDV 253
Score = 176 (67.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 51/224 (22%), Positives = 104/224 (46%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLD-AVDEEDVISWI 61
E+ + V++++ +++ SF + ++ + +L +LG+++ +D E + ++
Sbjct: 125 EIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFV 184
Query: 62 LKCQDES-GGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
L C +++ GGF G + H V +L ++ +LD DK+ ++ Q G +
Sbjct: 185 LSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLPSGGLN 244
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQ 179
G D +S+ + L+I+ RL I+ +K ++I+SC++ + GGF G
Sbjct: 245 GRPEKLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETGGFSDRTGNMPDIFH 304
Query: 180 IFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLP 223
+G L++ G H + LC Q L +P+ LP
Sbjct: 305 TLFGIGGLSLLG---HSGLKAINPTLCMPQYIIDRLGIKPQLLP 345
Score = 146 (56.5 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 45/192 (23%), Positives = 84/192 (43%)
Query: 40 LTTLDILGKLDA---VDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDK 96
L+ + IL DA +D E V+ +++ Q G F G+ + ++ AV L L +
Sbjct: 111 LSAIQILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGR 170
Query: 97 VD-ILDADKVSNYIVGLQNE-DGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV 154
++ +D +K +++ N+ DG F E Y + S+ RL ++VDK
Sbjct: 171 MEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLG 230
Query: 155 EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSG 213
++ + GG P + + +L I G LH + + L ++ Q ++G
Sbjct: 231 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETG 290
Query: 214 GLNGRPEKLPDV 225
G + R +PD+
Sbjct: 291 GFSDRTGNMPDI 302
>ASPGD|ASPL0000011885 [details] [associations]
symbol:AN3747 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0006612 EMBL:BN001302 GO:GO:0006888 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 EnsemblFungi:CADANIAT00004976 Uniprot:C8V7A2
Length = 334
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 126/229 (55%), Positives = 159/229 (69%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
+L +KH+ YI ++ +KD E + EHLRLNG YWGLT L +LG D + ++ + ++L
Sbjct: 18 KLCVEKHIDYIKKLDSRKDELEYWLTEHLRLNGVYWGLTALHLLGCPDGLPRDNAVDFVL 77
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDAD------KVSNYIVGLQN-E 115
CQ E+GGF GHD H+LYT+SAVQ+L D VD L+ KV ++I GLQ+ E
Sbjct: 78 SCQQENGGFGAAPGHDAHLLYTVSAVQILVTLDAVDELEKRGLGGKLKVGSFIAGLQDKE 137
Query: 116 DGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGES 175
GSF GD WGE+DTRF Y A+ LS+L LD ++V KAV Y+ C+NLDGG+G TPG ES
Sbjct: 138 TGSFMGDEWGELDTRFLYGALNALSLLGLLDLVDVAKAVSYVQRCENLDGGYGVTPGAES 197
Query: 176 HSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPD 224
H+GQ+F CVGALAIAG L VDKD LG WL ERQ+ GGLNGRPEKL D
Sbjct: 198 HAGQVFTCVGALAIAGRLDLVDKDRLGGWLSERQLDHGGLNGRPEKLAD 246
Score = 176 (67.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 44/176 (25%), Positives = 82/176 (46%)
Query: 17 EKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIG 76
+K+ SF L Y L L +LG LD VD +S++ +C++ GG+ G
Sbjct: 135 DKETGSFMGDEWGELDTRFLYGALNALSLLGLLDLVDVAKAVSYVQRCENLDGGYGVTPG 194
Query: 77 HDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAI 136
+ H + V LA+ ++D++D D++ ++ Q + G +G D +S+
Sbjct: 195 AESHAGQVFTCVGALAIAGRLDLVDKDRLGGWLSERQLDHGGLNGRPEKLADACYSWWVG 254
Query: 137 CCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQIFCCVGALAIAG 191
L+++ +L+ I+ K YI+ C++ + GGF PG + L++ G
Sbjct: 255 ASLAMIGKLNWIDGSKLAAYILRCQDPEAGGFADRPGNAVDVFHTHFAIAGLSLLG 310
Score = 149 (57.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 63/236 (26%), Positives = 107/236 (45%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEED------- 56
L D V +++S +++ F + L + ++ + IL LDAVDE +
Sbjct: 67 LPRDNAVDFVLSCQQENGGFGAAPGHDAHL---LYTVSAVQILVTLDAVDELEKRGLGGK 123
Query: 57 --VISWILKCQD-ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQ 113
V S+I QD E+G F G+ + + A+ L+L +D++D K +Y+ +
Sbjct: 124 LKVGSFIAGLQDKETGSFMGDEWGELDTRFLYGALNALSLLGLLDLVDVAKAVSYVQRCE 183
Query: 114 NEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 172
N DG + E + + L+I RLD ++ D+ ++ S + LD GG P
Sbjct: 184 NLDGGYGVTPGAESHAGQVFTCVGALAIAGRLDLVDKDRLGGWL-SERQLDHGGLNGRP- 241
Query: 173 GESHSGQIFCC-VGA-LAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDV 225
E + + VGA LA+ G L+ +D L ++ Q ++GG RP DV
Sbjct: 242 -EKLADACYSWWVGASLAMIGKLNWIDGSKLAAYILRCQDPEAGGFADRPGNAVDV 296
>POMBASE|SPAC167.02 [details] [associations]
symbol:ptb1 "geranylgeranyltransferase II beta subunit
Ptb1" species:4896 "Schizosaccharomyces pombe" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
PomBase:SPAC167.02 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0070317 GenomeReviews:CU329670_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612 GO:GO:0006888
GO:GO:0006995 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
GO:GO:0005968 EMBL:X92183 PIR:S65091 RefSeq:NP_593383.1
ProteinModelPortal:P46960 STRING:P46960 EnsemblFungi:SPAC167.02.1
GeneID:2543284 KEGG:spo:SPAC167.02 OrthoDB:EOG43V34B
NextBio:20804303 Uniprot:P46960
Length = 311
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 113/224 (50%), Positives = 152/224 (67%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
M L DKH+ Y+ + + D + + EHL ++ YW + +L K D +D+E ++S+
Sbjct: 1 MAVLLRDKHISYLHDIGNRTDELDFWLKEHLHVSAIYWSCMSFWLLKKKDQIDKERIVSF 60
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
+L C ESGGFA GHD H+ T+ AVQVLA+ D + ++D DKV++YI+GLQNEDGS
Sbjct: 61 LLSCLTESGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMK 120
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI 180
GD WGE+D RF Y I CL+IL +LD +N + AV++++ C N DGGFG PG ESH +
Sbjct: 121 GDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMV 180
Query: 181 FCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPD 224
F CV AL I L +D++LLGWW+ ERQVK GGLNGRPEKLPD
Sbjct: 181 FTCVAALKILNKLDLIDEELLGWWISERQVKGGGLNGRPEKLPD 224
Score = 180 (68.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 42/162 (25%), Positives = 84/162 (51%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
DK YII ++ + S + + Y G+ L ILGKLD +++ + W++KC +
Sbjct: 103 DKVASYIIGLQNEDGSMKGDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYN 162
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GGF G + H + V L + +K+D++D + + +I Q + G +G
Sbjct: 163 FDGGFGLCPGAESHGAMVFTCVAALKILNKLDLIDEELLGWWISERQVKGGGLNGRPEKL 222
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGF 167
D+ + + + L+I+ +LD I+ ++ +++++ ++ D GGF
Sbjct: 223 PDSCYGWWDLSPLAIIGKLDWIDRNQLIDFLLGTQDADSGGF 264
Score = 118 (46.6 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 40 LTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDI 99
+ L IL KLD +DEE + WI + Q + GG G P Y + LA+ K+D
Sbjct: 184 VAALKILNKLDLIDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDW 243
Query: 100 LDADKVSNYIVGLQNED-GSFSGDIWGEVDTRFSYIAICCLSILQ 143
+D +++ ++++G Q+ D G F+ D + ++ LS+LQ
Sbjct: 244 IDRNQLIDFLLGTQDADSGGFADRKEDATDVYHTCFSLAGLSLLQ 288
>WB|WBGene00015099 [details] [associations]
symbol:ggtb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
GO:GO:0009792 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008219 GO:GO:0000003 eggNOG:COG5029 EMBL:FO080148
GO:GO:0018344 GO:GO:0004663 RefSeq:NP_498559.1 RefSeq:NP_741214.2
UniGene:Cel.10970 ProteinModelPortal:P41992 SMR:P41992
STRING:P41992 PaxDb:P41992 PRIDE:P41992 EnsemblMetazoa:B0280.1a
GeneID:175998 KEGG:cel:CELE_B0280.1 UCSC:B0280.1a CTD:175998
WormBase:B0280.1a WormBase:B0280.1b GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 InParanoid:P41992 KO:K05956 OMA:ESHAGLI
NextBio:890666 PANTHER:PTHR11774:SF5 Uniprot:P41992
Length = 335
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 111/223 (49%), Positives = 154/223 (69%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
EL D H +I EK K+S+ ++ EHLR++G YW + +D+ +L+ + E++++++L
Sbjct: 23 ELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVL 82
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGD 122
C++ GG+ GHD H+L+TL AVQ L +F+ ++ DAD +S Y+ GLQ EDGSF GD
Sbjct: 83 GCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGD 142
Query: 123 IWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFC 182
+ GEVDTRF+ ++ +L RL +N+D AV +++ C N DGGFG PG ESHSGQI+C
Sbjct: 143 LSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYC 202
Query: 183 CVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
CVGALAIAG L +D+D WL RQ SGGLNGRPEKLPDV
Sbjct: 203 CVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDV 245
Score = 172 (65.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 47/195 (24%), Positives = 93/195 (47%)
Query: 6 ADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
AD +Y+ ++++ SF + + L T +LG+L ++ + + ++++C
Sbjct: 122 ADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCY 181
Query: 66 DESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWG 125
+ GGF G + H V LA+ ++D +D D+ + ++ Q + G +G
Sbjct: 182 NTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEK 241
Query: 126 EVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQIFCCV 184
D +S+ + L+IL RL+ I+ D ++I +C++ + GGF PG + +
Sbjct: 242 LPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPGDCADPFHTVFGI 301
Query: 185 GALAIAG--ALHHVD 197
AL++ G L VD
Sbjct: 302 AALSLFGDDTLESVD 316
Score = 164 (62.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 47/223 (21%), Positives = 93/223 (41%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
++ ++ V Y++ + L + TL I ++ D + + ++
Sbjct: 72 MSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKG 131
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
Q E G F G++ + +TL ++ L ++ L+ D +++ N DG F
Sbjct: 132 LQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRP 191
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
E + Y + L+I RLD+I+ D+ E++ + GG P +
Sbjct: 192 GSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWV 251
Query: 184 VGALAIAGALHHVDKDLLGWWL--CERQVKSGGLNGRPEKLPD 224
+ +LAI G L+ +D D + ++ C+ ++GG RP D
Sbjct: 252 LASLAILGRLNFIDSDAMKKFIYACQDD-ETGGFADRPGDCAD 293
Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
Identities = 34/143 (23%), Positives = 63/143 (44%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+ L D V++++ F + Y + L I G+LD +D + W
Sbjct: 165 LSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEW 224
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNED-GSF 119
+ Q +SGG G P V Y+ + LA+ +++ +D+D + +I Q+++ G F
Sbjct: 225 LAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGF 284
Query: 120 SGDIWGE-VDTRFSYIAICCLSI 141
+ D G+ D + I LS+
Sbjct: 285 A-DRPGDCADPFHTVFGIAALSL 306
>UNIPROTKB|G4MQQ5 [details] [associations]
symbol:MGG_09304 "Type-2 protein geranylgeranyltransferase
subunit beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0006612 GO:GO:0006888
EMBL:CM001231 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_003709954.1
ProteinModelPortal:G4MQQ5 EnsemblFungi:MGG_09304T0 GeneID:2680219
KEGG:mgr:MGG_09304 Uniprot:G4MQQ5
Length = 329
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 122/228 (53%), Positives = 158/228 (69%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
LAA HVKY+ S++ +K+ +E + EHLRLNG YWGL L +LG+ DA+ + I ++L
Sbjct: 14 LAAAAHVKYVQSLDTRKEDYEYWLTEHLRLNGVYWGLVALHLLGQPDALPRDATIEFVLS 73
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDAD-----KVSNYIVGLQN-EDG 117
CQ ++GGF GHD H+L T+SAVQ+LA+ D +D LD +V +I LQN + G
Sbjct: 74 CQHDNGGFGAAPGHDAHMLSTVSAVQILAMVDALDELDKKGKGRRQVGKFIADLQNRQTG 133
Query: 118 SFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHS 177
+F+GD WGE DTRF Y A+ LS+L L+ ++V KAV++IV+C N DGG+G PG ESHS
Sbjct: 134 TFAGDEWGEEDTRFLYGALNALSLLGLLEMVDVGKAVDHIVACANFDGGYGNRPGAESHS 193
Query: 178 GQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDV 225
GQIF CV AL+IAG L VD D LG WL ERQ+ GGLNGRPEK DV
Sbjct: 194 GQIFTCVAALSIAGRLDLVDTDKLGRWLSERQIAGGGLNGRPEKQEDV 241
Score = 162 (62.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 53/232 (22%), Positives = 102/232 (43%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEED------- 56
L D +++++S + F + + ++ + IL +DA+DE D
Sbjct: 62 LPRDATIEFVLSCQHDNGGFGAAPGHDAHMLST---VSAVQILAMVDALDELDKKGKGRR 118
Query: 57 -VISWILKCQD-ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQN 114
V +I Q+ ++G FAG+ + + A+ L+L ++++D K ++IV N
Sbjct: 119 QVGKFIADLQNRQTGTFAGDEWGEEDTRFLYGALNALSLLGLLEMVDVGKAVDHIVACAN 178
Query: 115 EDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGE 174
DG + E + + + LSI RLD ++ DK ++ + GG P +
Sbjct: 179 FDGGYGNRPGAESHSGQIFTCVAALSIAGRLDLVDTDKLGRWLSERQIAGGGLNGRPEKQ 238
Query: 175 SHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDV 225
+ + +L G H +D+D L ++ + Q + GG++ RP DV
Sbjct: 239 EDVCYSWWVLSSLETIGRTHWIDRDQLAAFILKCQDTEKGGMSDRPGNQVDV 290
>SGD|S000006380 [details] [associations]
symbol:BET2 "Beta subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0018344 "protein geranylgeranylation" evidence=IEA;IDA]
[GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA;IDA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IDA;IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 SGD:S000006380
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
EMBL:BK006949 GO:GO:0006888 EMBL:U25842 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 GO:GO:0005968
OrthoDB:EOG43V34B EMBL:M29585 EMBL:M26597 EMBL:AY558067 PIR:S59834
RefSeq:NP_015502.1 ProteinModelPortal:P20133 SMR:P20133
DIP:DIP-2214N IntAct:P20133 MINT:MINT-642059 STRING:P20133
PaxDb:P20133 EnsemblFungi:YPR176C GeneID:856306 KEGG:sce:YPR176C
CYGD:YPR176c OMA:ERQDYES NextBio:981673 Genevestigator:P20133
GermOnline:YPR176C Uniprot:P20133
Length = 325
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 121/229 (52%), Positives = 154/229 (67%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH++YI S++ KK +FE + EHLRLNG YWGLT L +L + +E+VIS++L
Sbjct: 7 LLKEKHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLS 66
Query: 64 CQDES-GGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK---VSNYIVGLQNEDGSF 119
C D+ G FA HD H+L TLSAVQ+LA +D +D+L D+ + ++I G Q EDGSF
Sbjct: 67 CWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSF 126
Query: 120 SGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQ 179
GD +GEVDTRF Y A+ LSIL L VD AV++++ C N DGGFG P ESH+ Q
Sbjct: 127 QGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQ 186
Query: 180 IFCCVGALAIAGALHHVDKDLL---GWWLCERQVKSGGLNGRPEKLPDV 225
F C+GALAIA L + D L GWWLCERQ+ GGLNGRP KLPDV
Sbjct: 187 AFTCLGALAIANKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDV 235
Score = 161 (61.7 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 51/195 (26%), Positives = 90/195 (46%)
Query: 4 LAADKHVKYI--ISVEKKKD-SFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
L D+ V+ I I + +D SF+ + Y L+ L ILG+L + + + +
Sbjct: 104 LGKDRKVRLISFIRGNQLEDGSFQGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDF 163
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSN---YIVGLQNEDG 117
+LKC + GGF + H + + LA+ +K+D+L D++ ++ Q +G
Sbjct: 164 VLKCYNFDGGFGLCPNAESHAAQAFTCLGALAIANKLDMLSDDQLEEIGWWLCERQLPEG 223
Query: 118 SFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN-LDGGFGCTPGGESH 176
+G D +S+ + L+I+ RLD IN +K E+I+ C++ GG P E
Sbjct: 224 GLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQDEKKGGISDRPENEVD 283
Query: 177 SGQIFCCVGALAIAG 191
V L++ G
Sbjct: 284 VFHTVFGVAGLSLMG 298
Score = 119 (46.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 54/191 (28%), Positives = 89/191 (46%)
Query: 43 LDILGKLDAVDEEDVISWILKCQDESGGFAGN-IGH-DPHVLYT-LSAVQVLA-LFDKVD 98
LD+LGK V +IS+I Q E G F G+ G D +YT LSA+ +L L +V
Sbjct: 101 LDVLGKDRKVR---LISFIRGNQLEDGSFQGDRFGEVDTRFVYTALSALSILGELTSEV- 156
Query: 99 ILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVE--- 155
D ++++ N DG F E ++ + L+I +LD ++ D+ E
Sbjct: 157 ---VDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCLGALAIANKLDMLSDDQLEEIGW 213
Query: 156 YIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGG 214
++ + +GG P + + +LAI G L ++ + L ++ + Q K GG
Sbjct: 214 WLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQDEKKGG 273
Query: 215 LNGRPEKLPDV 225
++ RPE DV
Sbjct: 274 ISDRPENEVDV 284
>CGD|CAL0000126 [details] [associations]
symbol:BET2 species:5476 "Candida albicans" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
CGD:CAL0000126 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AACQ01000032
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
PANTHER:PTHR11774:SF5 RefSeq:XP_719325.1 ProteinModelPortal:Q5ACS9
STRING:Q5ACS9 GeneID:3639025 KEGG:cal:CaO19.7563 Uniprot:Q5ACS9
Length = 341
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 113/235 (48%), Positives = 148/235 (62%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKC-QD 66
KHV+YI+ E + SFE + EHLR+NG YWG+T L + +L A+ ++DVI +I+ C D
Sbjct: 17 KHVQYIVEQESHR-SFEYWLSEHLRMNGLYWGVTALITMNELSALAQQDVIDYIMLCWDD 75
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDK-VDILD----------ADKVSNYIVGLQNE 115
++G F HD H+L TLSA+QVL ++D+ + +L+ +++ +I GLQ
Sbjct: 76 KTGAFGSFPKHDGHILSTLSALQVLKIYDQELTVLNNNNESLNGNKRERLIKFITGLQLP 135
Query: 116 DGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGES 175
DGSF GD +GEVDTRF Y A+ LS+L L D A +I+ C N DGGFG PG ES
Sbjct: 136 DGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFNFDGGFGLIPGSES 195
Query: 176 HSGQIFCCVGALAIAGALHHVD----KDLLGWWLCERQV-KSGGLNGRPEKLPDV 225
H+ Q+F CVGALAI L +D K L WL ERQV SGG NGRPEKLPDV
Sbjct: 196 HAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWLTERQVLPSGGFNGRPEKLPDV 250
Score = 154 (59.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 42/175 (24%), Positives = 88/175 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
++ +K+I ++ SF+ + Y +++L +L L + ++I++C +
Sbjct: 123 ERLIKFITGLQLPDGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFN 182
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDAD----KVSNYIVGLQN-EDGSFSG 121
GGF G + H + V LA+ +K+D+LD + K+ +++ Q G F+G
Sbjct: 183 FDGGFGLIPGSESHAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWLTERQVLPSGGFNG 242
Query: 122 DIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGES 175
D +S+ + LSIL+R + +++ +I++C++L+ GGF PG ++
Sbjct: 243 RPEKLPDVCYSWWVLSSLSILKRKNWVDLKILENFILTCQDLENGGFSDRPGNQT 297
>UNIPROTKB|Q5T4U8 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152 EMBL:AL357314
UniGene:Hs.78948 HGNC:HGNC:9796 ChiTaRS:RABGGTB IPI:IPI00514956
SMR:Q5T4U8 STRING:Q5T4U8 Ensembl:ENST00000370826
HOGENOM:HOG000139659 HOVERGEN:HBG058332 Uniprot:Q5T4U8
Length = 152
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 67/129 (51%), Positives = 96/129 (74%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ GLQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDI 137
Query: 124 WGEVDTRFS 132
WG V RFS
Sbjct: 138 WGNV--RFS 144
>UNIPROTKB|F1S9R0 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
EMBL:CU929611 Ensembl:ENSSSCT00000004178 ArrayExpress:F1S9R0
Uniprot:F1S9R0
Length = 145
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 62/122 (50%), Positives = 91/122 (74%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LFLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WG 125
WG
Sbjct: 138 WG 139
>POMBASE|SPAC17G6.04c [details] [associations]
symbol:cpp1 "protein farnesyltransferase beta subunit
Cpp1" species:4896 "Schizosaccharomyces pombe" [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0010958 "regulation of amino acid import" evidence=IGI]
[GO:0018343 "protein farnesylation" evidence=IMP;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 PomBase:SPAC17G6.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
GO:GO:0008270 GO:GO:0042127 GO:GO:0018343 GO:GO:0006995
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 OMA:HPVYNIC PIR:T37836
RefSeq:NP_594251.1 ProteinModelPortal:O13782 STRING:O13782
EnsemblFungi:SPAC17G6.04c.1 GeneID:2542380 KEGG:spo:SPAC17G6.04c
OrthoDB:EOG4ZPJ4B NextBio:20803439 GO:GO:0010958 Uniprot:O13782
Length = 382
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 77/229 (33%), Positives = 125/229 (54%)
Query: 8 KHVKYIISVEKKKDSFES--VVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
KH+KY+ K D S V++ R YW L++L ILGKLD+ E IS + + +
Sbjct: 33 KHLKYLT---KMLDPLPSPFTVLDASRAWMVYWELSSLAILGKLDSSVCERAISSVRQLK 89
Query: 66 DESGGFAGNIGHDPHVLYTLSAVQVLALFDKVD---ILDADKVSNYIVGLQNEDGSFSGD 122
SGGF G G D H+L T +++ + L D D +++ D++ +++ L+N DGSF +
Sbjct: 90 GPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVN 149
Query: 123 IWGEVDTRFSYIAICCLSILQ-RLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIF 181
GE D R Y A+C S++ +D + ++++ C+ +GG P E+H G F
Sbjct: 150 NEGESDARSVYAAVCVSSLVGISMDDPLFEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTF 209
Query: 182 CCVGALAIAGALHHVDKDLLGWWLCERQVKS-GGLNGRPEKLPDVGIFS 229
C + A+A+ G L ++++ L WL +RQ + G +GR KL D G +S
Sbjct: 210 CALAAIALLGGLDNLNEIKLSTWLVQRQDPALYGFSGRSNKLVD-GCYS 257
>ZFIN|ZDB-GENE-030131-2220 [details] [associations]
symbol:fntb "farnesyltransferase, CAAX box, beta"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 ZFIN:ZDB-GENE-030131-2220
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:AL928866 EMBL:BX255891 EMBL:BC071443
IPI:IPI00492729 RefSeq:NP_001002128.1 UniGene:Dr.77794 SMR:Q6IQG3
STRING:Q6IQG3 Ensembl:ENSDART00000038149 GeneID:323500
KEGG:dre:323500 InParanoid:Q6IQG3 NextBio:20808280 Uniprot:Q6IQG3
Length = 419
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 73/232 (31%), Positives = 117/232 (50%)
Query: 4 LAADKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L ++H Y+ + D++E + L YW L +L++L + + A DV ++
Sbjct: 58 LLREQHYHYLKKGLRHLSDAYECLDASRPWL--CYWILHSLELLEEPVPAAVASDVCQFL 115
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
+CQ +GGF G G H+ T +AV L + + ++++ + + +++ ++ DGS
Sbjct: 116 ARCQAPTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQPDGS 175
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F I GEVD R +Y A S+ + D +I+SC+N +GG G PG E+H G
Sbjct: 176 FVMHIGGEVDVRSAYCAASVASLTNIIAPTLFDGTHNWIISCQNWEGGLGGVPGLEAHGG 235
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC AL I G H +D L W+ RQ++ GG GR KL D G +S
Sbjct: 236 YTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVD-GCYS 286
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 52/204 (25%), Positives = 85/204 (41%)
Query: 12 YIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGF 71
++ SV++ SF + + + AY + + + + +WI+ CQ+ GG
Sbjct: 165 FLYSVKQPDGSFVMHIGGEVDVRSAYCAASVASLTNIIAPTLFDGTHNWIISCQNWEGGL 224
Query: 72 AGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNE-DGSFSGDIWGEVDTR 130
G G + H YT L + K +LD + ++ Q +G F G VD
Sbjct: 225 GGVPGLEAHGGYTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGC 284
Query: 131 FSYIAICCLSILQR-LDK-----INVD------KAV-EYIV-SCKNLDGGFGCTPGGESH 176
+S+ L +L R L K ++V KA+ EYI+ C+N GG PG
Sbjct: 285 YSFWQAGLLPLLHRALFKEGDSTLSVSSWMFERKALQEYILLCCQNPGGGLLDKPGKSRD 344
Query: 177 SGQIFCCVGALAIAGALHHVDKDL 200
C+ L++A H +KDL
Sbjct: 345 FYHTSYCLSGLSVAQ--HFGNKDL 366
>UNIPROTKB|B4E1A0 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ58825, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6
HOVERGEN:HBG008173 UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745
HGNC:HGNC:42960 GeneID:100529261 KEGG:hsa:100529261 CTD:100529261
GenomeRNAi:100529261 EMBL:AK303739 IPI:IPI00984229
RefSeq:NP_001189487.1 SMR:B4E1A0 STRING:B4E1A0
Ensembl:ENST00000542227 UCSC:uc010tsm.2 Uniprot:B4E1A0
Length = 391
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 74/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 27 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 84
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 85 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 144
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 145 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 204
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 205 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 255
>UNIPROTKB|P49356 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=IDA] [GO:0004660
"protein farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0005875 GO:GO:0008285
EMBL:CH471061 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008270 GO:GO:0034097 GO:GO:0014070
GO:GO:0042277 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 PDB:1JCQ PDB:1LD7 PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4
PDB:1TN6 PDB:2F0Y PDB:2H6F PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ
PDB:3E37 PDBsum:1JCQ PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC
PDBsum:1S63 PDBsum:1SA4 PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F
PDBsum:2H6G PDBsum:2H6H PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37
GO:GO:0019840 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
HOVERGEN:HBG008173 OrthoDB:EOG4KKZ33 EMBL:L00635 EMBL:AK315714
EMBL:BC020232 EMBL:L10414 IPI:IPI00026817 PIR:B49274
RefSeq:NP_002019.1 UniGene:Hs.325531 ProteinModelPortal:P49356
SMR:P49356 IntAct:P49356 MINT:MINT-238879 STRING:P49356
PhosphoSite:P49356 DMDM:1346696 PeptideAtlas:P49356 PRIDE:P49356
DNASU:2342 Ensembl:ENST00000246166 GeneID:2342 KEGG:hsa:2342
UCSC:uc001xia.3 GeneCards:GC14P065454 HGNC:HGNC:3785 MIM:134636
neXtProt:NX_P49356 PharmGKB:PA28202 InParanoid:P49356 OMA:YWIANSL
PhylomeDB:P49356 BindingDB:P49356 ChEMBL:CHEMBL272
EvolutionaryTrace:P49356 GenomeRNAi:2342 NextBio:9505
ArrayExpress:P49356 Bgee:P49356 CleanEx:HS_FNTB
Genevestigator:P49356 GermOnline:ENSG00000125954 Uniprot:P49356
Length = 437
Score = 294 (108.6 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 74/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 251 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 301
>UNIPROTKB|B4DL54 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ59570, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 HOVERGEN:HBG008173 OMA:HPVYNIC
UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960
EMBL:AK296850 IPI:IPI00909112 RefSeq:NP_001189488.1 SMR:B4DL54
STRING:B4DL54 Ensembl:ENST00000447296 GeneID:100529261
KEGG:hsa:100529261 UCSC:uc010tsl.2 CTD:100529261
GenomeRNAi:100529261 Uniprot:B4DL54
Length = 471
Score = 294 (108.6 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 74/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 107 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 164
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 165 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 224
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 225 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 284
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 285 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 335
>UNIPROTKB|H0YHI0 [details] [associations]
symbol:CHURC1-FNTB "Protein CHURC1-FNTB" species:9606 "Homo
sapiens" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965
"protein farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6 OMA:HPVYNIC
EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960 Ensembl:ENST00000549987
Uniprot:H0YHI0
Length = 472
Score = 294 (108.6 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 74/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 108 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 165
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 166 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 225
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 226 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 285
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 286 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 336
>UNIPROTKB|D3DQ78 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
EMBL:CH471059 EMBL:AL357314 GO:GO:0018344 GO:GO:0004663
PANTHER:PTHR11774:SF5 UniGene:Hs.78948 HGNC:HGNC:9796
ChiTaRS:RABGGTB IPI:IPI01013423 SMR:D3DQ78 Ensembl:ENST00000535300
Uniprot:D3DQ78
Length = 157
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 49/64 (76%), Positives = 53/64 (82%)
Query: 162 NLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
N DGGFGC PG ESH+GQI+CC G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEK
Sbjct: 2 NFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEK 61
Query: 222 LPDV 225
LPDV
Sbjct: 62 LPDV 65
Score = 108 (43.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + ++IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 68 SWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 127
>MGI|MGI:1861305 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=ISO] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IMP] [GO:0010035 "response to
inorganic substance" evidence=ISO] [GO:0014070 "response to organic
cyclic compound" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=ISO]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042060 "wound
healing" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0042277 "peptide binding"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045787 "positive regulation of cell cycle" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IMP] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=ISO] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
MGI:MGI:1861305 GO:GO:0005875 GO:GO:0008285 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144 GO:GO:0008270
GO:GO:0034097 GO:GO:0014070 GO:GO:0042277 GO:GO:0010035
GO:GO:0042060 GO:GO:0018343 GO:GO:0048146 GO:GO:0045787
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:3PZ4 PDBsum:3PZ4
GO:GO:0019840 HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
CTD:2342 GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173
OMA:HPVYNIC OrthoDB:EOG4KKZ33 EMBL:BC031417 IPI:IPI00169914
RefSeq:NP_666039.1 UniGene:Mm.151174 ProteinModelPortal:Q8K2I1
SMR:Q8K2I1 STRING:Q8K2I1 PhosphoSite:Q8K2I1 PRIDE:Q8K2I1
Ensembl:ENSMUST00000041008 GeneID:110606 KEGG:mmu:110606
UCSC:uc007nyu.1 InParanoid:Q8K2I1 BindingDB:Q8K2I1
ChEMBL:CHEMBL2631 ChiTaRS:FNTB NextBio:364317 Bgee:Q8K2I1
CleanEx:MM_FNTB Genevestigator:Q8K2I1 GermOnline:ENSMUSG00000033373
Uniprot:Q8K2I1
Length = 437
Score = 288 (106.4 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 72/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 301
>RGD|620119 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta" species:10116
"Rattus norvegicus" [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISO] [GO:0004660 "protein farnesyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018343 "protein farnesylation"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0042060 "wound healing" evidence=IEA;ISO]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA;ISO] [GO:0051770 "positive
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0019840 "isoprenoid binding"
evidence=IDA] [GO:0042277 "peptide binding" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 RGD:620119
GO:GO:0005875 GO:GO:0008285 GO:GO:0043234 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0051770 eggNOG:COG5029
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D PDB:1D8E
PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR PDB:1JCS
PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1
PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L
PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34
PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO
PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP
PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR
PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N94
PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R
PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2
PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81 PDBsum:2BED
PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY
PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5
PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM
PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 288 (106.4 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 72/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 301
>UNIPROTKB|Q02293 [details] [associations]
symbol:Fntb "Protein farnesyltransferase subunit beta"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
RGD:620119 GO:GO:0005875 GO:GO:0008285 GO:GO:0043234
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0045787 GO:GO:0051770
eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D
PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR
PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A
PDB:1NI1 PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ
PDB:1QE2 PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI
PDB:2R2L PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33
PDB:3E34 PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM
PDB:4GTO PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E
PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7
PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR
PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4
PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ
PDBsum:1QE2 PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81
PDBsum:2BED PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS
PDBsum:3DPY PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34
PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ
PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 288 (106.4 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 72/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 301
>GENEDB_PFALCIPARUM|PFF0120w [details] [associations]
symbol:PFF0120w "putative
geranylgeranyltransferase" species:5833 "Plasmodium falciparum"
[GO:0004661 "protein geranylgeranyltransferase activity"
evidence=ISS] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AL844505 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5
RefSeq:XP_966015.1 ProteinModelPortal:C6KSM5
EnsemblProtists:PFF0120w:mRNA GeneID:3885742 KEGG:pfa:PFF0120w
EuPathDB:PlasmoDB:PF3D7_0602500 ProtClustDB:CLSZ2433471
Uniprot:C6KSM5
Length = 379
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 53/123 (43%), Positives = 77/123 (62%)
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+ YI+ L NEDGSF GD+WGEVDTRF Y A+ CL+IL +++ + VDK Y+++
Sbjct: 155 ENTCKYILTLFNEDGSFKGDMWGEVDTRFVYSAVSCLTILNKINLVCVDKISSYLLTNYA 214
Query: 163 L-DGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
+ + GF G E H+ +FCC+ L + L+ ++++ L WL RQ +GG NGR EK
Sbjct: 215 ICENGFSWVSGNEPHAASVFCCIATLFLIQKLYLINENKLAHWLSLRQTTNGGFNGRAEK 274
Query: 222 LPD 224
L D
Sbjct: 275 LTD 277
Score = 162 (62.1 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 56/210 (26%), Positives = 100/210 (47%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
E +KH++Y+ S K++ E + E L++ G ++ L + IL +E+ I++IL
Sbjct: 6 EFVQEKHIQYLESYTTIKNAEELIFNETLKMCGVFYFLCSCKILSHT-IEKKEEFINFIL 64
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLAL----FDKVDILDADKVSNYIVGLQNEDGS 118
KCQ+ GGF NI +D H++ T A+ L L FDK++ DK +N+ + N + +
Sbjct: 65 KCQNVDGGFGNNINYDSHIVSTHHAILSLLLLNYSFDKINEY-MDKANNHH-DINNTNDN 122
Query: 119 FSGDIWGEVDTR---FSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGES 175
D+ + F+ ++ + + N K YI++ N DG F GE
Sbjct: 123 NKVDLNNTNNNNKLDFNNTNDNNYNVYSKSIRENTCK---YILTLFNEDGSFKGDMWGEV 179
Query: 176 HSGQIFCCVGALAIAGALHHVDKDLLGWWL 205
+ ++ V L I ++ V D + +L
Sbjct: 180 DTRFVYSAVSCLTILNKINLVCVDKISSYL 209
Score = 156 (60.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 45/193 (23%), Positives = 95/193 (49%)
Query: 11 KYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK----CQD 66
KYI+++ + SF+ + + Y ++ L IL K++ V + + S++L C++
Sbjct: 159 KYILTLFNEDGSFKGDMWGEVDTRFVYSAVSCLTILNKINLVCVDKISSYLLTNYAICEN 218
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GF+ G++PH + L L K+ +++ +K+++++ Q +G F+G
Sbjct: 219 ---GFSWVSGNEPHAASVFCCIATLFLIQKLYLINENKLAHWLSLRQTTNGGFNGRAEKL 275
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQIFCCVG 185
DT +S+ L +L++ + IN + YI+ C++++ GG P F +
Sbjct: 276 TDTCYSWWIFSTLIVLKKYNWINKNALKNYILLCQDIEKGGISDNPDCLPDICHTFFGLA 335
Query: 186 ALAIAGALHHVDK 198
AL++ L+ +K
Sbjct: 336 ALSLIDNLNESEK 348
>UNIPROTKB|F1Q0W7 [details] [associations]
symbol:FNTB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965 KO:K05954
PANTHER:PTHR11774:SF6 CTD:2342 GeneTree:ENSGT00550000075042
OMA:HPVYNIC EMBL:AAEX03005789 RefSeq:XP_547857.2
Ensembl:ENSCAFT00000025678 GeneID:490735 KEGG:cfa:490735
Uniprot:F1Q0W7
Length = 437
Score = 287 (106.1 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 72/232 (31%), Positives = 115/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQMVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + +++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYGVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I +++ L W+ RQ++ GG GR KL D G +S
Sbjct: 251 YTFCGLAALVILKKERYLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 301
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 48/204 (23%), Positives = 79/204 (38%)
Query: 2 GELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWI 61
G + +K ++Y+ S+++ SF V + + AY + + + E WI
Sbjct: 170 GVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWI 229
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNE-DGSFS 120
+CQ+ GG G G + H YT + L + K L+ + ++ Q +G F
Sbjct: 230 ARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERYLNLKSLLQWVTSRQMRFEGGFQ 289
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV-------------EYIVSCKNLDGGF 167
G VD +S+ L +L R D A+ EYI+ C G
Sbjct: 290 GRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGG 349
Query: 168 GCTPGGESHSGQIFC-CVGALAIA 190
G+S C C+ L+IA
Sbjct: 350 LLDKPGKSRDFYHTCYCLSGLSIA 373
>UNIPROTKB|P49355 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9913 "Bos taurus" [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0008285
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 eggNOG:COG5029 GO:GO:0004311
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 EMBL:L00633 EMBL:BC123393 IPI:IPI00705098
PIR:C49274 RefSeq:NP_786999.1 UniGene:Bt.4529
ProteinModelPortal:P49355 SMR:P49355 STRING:P49355
Ensembl:ENSBTAT00000007751 GeneID:327686 KEGG:bta:327686 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 InParanoid:P49355
OMA:HPVYNIC OrthoDB:EOG4KKZ33 BindingDB:P49355 ChEMBL:CHEMBL4671
NextBio:20810151 Uniprot:P49355
Length = 437
Score = 285 (105.4 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 73/232 (31%), Positives = 114/232 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQMVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + D+++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHDGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 301
>TAIR|locus:2173802 [details] [associations]
symbol:ERA1 "ENHANCED RESPONSE TO ABA 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IMP] [GO:0005965 "protein farnesyltransferase complex"
evidence=IMP] [GO:0018342 "protein prenylation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009788 "negative
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
[GO:0009934 "regulation of meristem structural organization"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0009414
GO:GO:0042127 GO:GO:0009788 GO:GO:0018343 EMBL:AB010699
GO:GO:0009934 eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 GO:GO:0018342 EMBL:AF214106 EMBL:BT030457 EMBL:U46574
EMBL:U44849 IPI:IPI00543310 RefSeq:NP_198844.1 UniGene:At.9205
ProteinModelPortal:Q38920 SMR:Q38920 IntAct:Q38920 STRING:Q38920
PaxDb:Q38920 PRIDE:Q38920 EnsemblPlants:AT5G40280.1 GeneID:834026
KEGG:ath:AT5G40280 TAIR:At5g40280 HOGENOM:HOG000190594
InParanoid:Q38920 KO:K05954 OMA:QDASQPW ProtClustDB:PLN02710
BioCyc:ARA:AT5G40280-MONOMER BioCyc:MetaCyc:AT5G40280-MONOMER
ArrayExpress:Q38920 Genevestigator:Q38920 GermOnline:AT5G40280
PANTHER:PTHR11774:SF6 Uniprot:Q38920
Length = 482
Score = 275 (101.9 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 70/229 (30%), Positives = 113/229 (49%)
Query: 1 MGELAADKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVI 58
M E+ DK + Y++ + + F S+ L YW L ++ +LG+ +D E + I
Sbjct: 78 MMEIQRDKQLDYLMKGLRQLGPQFSSLDANRPWL--CYWILHSIALLGETVDDELESNAI 135
Query: 59 SWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF--DK-VDILDADKVSNYIVGLQNE 115
++ +CQ GG+ G G PH+ T +AV L DK + ++ +K+S ++ +++
Sbjct: 136 DFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDT 195
Query: 116 DGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGES 175
G F GE+D R Y AI SIL +D +YI+SC+ +GG G PG E+
Sbjct: 196 SGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEA 255
Query: 176 HSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPD 224
H G +C + A+ + + ++ D L W RQ G GR KL D
Sbjct: 256 HGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVD 304
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 28 MEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSA 87
M + + Y ++ IL +D + + +IL CQ GG G G + H YT
Sbjct: 204 MGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCG 263
Query: 88 VQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDK 147
+ + L ++VD L+ D + N+ V Q + F G VD +++ +LQRL
Sbjct: 264 LAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYS 323
Query: 148 IN 149
N
Sbjct: 324 TN 325
>WB|WBGene00006465 [details] [associations]
symbol:fntb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042
OMA:HPVYNIC HSSP:P49356 PIR:T21291 RefSeq:NP_506580.1
ProteinModelPortal:Q19752 IntAct:Q19752 STRING:Q19752 PaxDb:Q19752
EnsemblMetazoa:F23B12.6.1 EnsemblMetazoa:F23B12.6.2
EnsemblMetazoa:F23B12.6.3 GeneID:179946 KEGG:cel:CELE_F23B12.6
UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6 InParanoid:Q19752
NextBio:907502 Uniprot:Q19752
Length = 401
Score = 268 (99.4 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 71/228 (31%), Positives = 113/228 (49%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDE-EDVISWILKCQD 66
KH Y++ K S ++ R YWG+ L IL D E++I ++ C+
Sbjct: 65 KHASYLLRYLKNCPS-SYATLDASRSWMCYWGVNALKILDAEIPNDVIENIIVFLKSCEH 123
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA-DKVS--NYIVGLQNEDGSFSGDI 123
GG+ G G H+ T +AV L K + L + ++V+ N++ ++E G F
Sbjct: 124 PEGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHE 183
Query: 124 WGEVDTRFSYIAICCLSILQR-LDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFC 182
GE+D R +Y A+ I+ +D+I+ + E+I+SC++ +GGFG P E+H G FC
Sbjct: 184 GGEIDMRSAYCALATCEIVGLPMDEIS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFC 242
Query: 183 CVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
V +L + D + L W RQ++ GG GR KL D G +S
Sbjct: 243 AVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVD-GCYS 289
Score = 123 (48.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 33 LNGAYWGLTTLDILG-KLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVL 91
+ AY L T +I+G +D + V WI+ CQ GGF G + H YT AV L
Sbjct: 189 MRSAYCALATCEIVGLPMDEISN-GVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASL 247
Query: 92 ALFDKVDILDADKVSNYIVGLQNE-DGSFSGDIWGEVDTRFSYIAICCLSILQ-RLDKI- 148
L ++ + D + + + Q +G F G VD +S+ +L +++
Sbjct: 248 VLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMEREG 307
Query: 149 -NVDKAV-------EYI-VSCKNLDGGFGCTP 171
+++K + EYI V C+++ GGF P
Sbjct: 308 RSLEKGLFEARMLEEYILVGCQSVHGGFKDKP 339
>UNIPROTKB|Q19752 [details] [associations]
symbol:fntb-1 "Protein FNTB-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
GeneTree:ENSGT00550000075042 OMA:HPVYNIC HSSP:P49356 PIR:T21291
RefSeq:NP_506580.1 ProteinModelPortal:Q19752 IntAct:Q19752
STRING:Q19752 PaxDb:Q19752 EnsemblMetazoa:F23B12.6.1
EnsemblMetazoa:F23B12.6.2 EnsemblMetazoa:F23B12.6.3 GeneID:179946
KEGG:cel:CELE_F23B12.6 UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6
InParanoid:Q19752 NextBio:907502 Uniprot:Q19752
Length = 401
Score = 268 (99.4 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 71/228 (31%), Positives = 113/228 (49%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDE-EDVISWILKCQD 66
KH Y++ K S ++ R YWG+ L IL D E++I ++ C+
Sbjct: 65 KHASYLLRYLKNCPS-SYATLDASRSWMCYWGVNALKILDAEIPNDVIENIIVFLKSCEH 123
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA-DKVS--NYIVGLQNEDGSFSGDI 123
GG+ G G H+ T +AV L K + L + ++V+ N++ ++E G F
Sbjct: 124 PEGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHE 183
Query: 124 WGEVDTRFSYIAICCLSILQR-LDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFC 182
GE+D R +Y A+ I+ +D+I+ + E+I+SC++ +GGFG P E+H G FC
Sbjct: 184 GGEIDMRSAYCALATCEIVGLPMDEIS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFC 242
Query: 183 CVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
V +L + D + L W RQ++ GG GR KL D G +S
Sbjct: 243 AVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVD-GCYS 289
Score = 123 (48.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 33 LNGAYWGLTTLDILG-KLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVL 91
+ AY L T +I+G +D + V WI+ CQ GGF G + H YT AV L
Sbjct: 189 MRSAYCALATCEIVGLPMDEISN-GVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASL 247
Query: 92 ALFDKVDILDADKVSNYIVGLQNE-DGSFSGDIWGEVDTRFSYIAICCLSILQ-RLDKI- 148
L ++ + D + + + Q +G F G VD +S+ +L +++
Sbjct: 248 VLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMEREG 307
Query: 149 -NVDKAV-------EYI-VSCKNLDGGFGCTP 171
+++K + EYI V C+++ GGF P
Sbjct: 308 RSLEKGLFEARMLEEYILVGCQSVHGGFKDKP 339
>DICTYBASE|DDB_G0270948 [details] [associations]
symbol:fntB "protein farnesyltransferase beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;ISS] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
dictyBase:DDB_G0270948 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 KO:K05954
OMA:QDASQPW PANTHER:PTHR11774:SF6 RefSeq:XP_646280.1 HSSP:P49356
ProteinModelPortal:Q55D51 EnsemblProtists:DDB0237553 GeneID:8617235
KEGG:ddi:DDB_G0270948 Uniprot:Q55D51
Length = 500
Score = 270 (100.1 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 55/159 (34%), Positives = 87/159 (54%)
Query: 69 GGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGSFSGDIWG 125
GGF G H HV+ T +AV L + + +D + + +++ ++ ++G+F+ + G
Sbjct: 136 GGFGGGNSHTSHVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAFTSEDGG 195
Query: 126 EVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVG 185
E D+R +Y AI S+L L V++++SC+ +GGFG P E+H G FC V
Sbjct: 196 EYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVA 255
Query: 186 ALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPD 224
AL+I +LH +D + L W+ RQ GG GR KL D
Sbjct: 256 ALSILNSLHKIDMNSLHRWITYRQSNDGGFEGRTNKLVD 294
Score = 133 (51.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 11 KYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGG 70
K+++ ++ K+ +F S Y + +L L A E V+ ++L CQ GG
Sbjct: 177 KFLMRMKTKEGAFTSEDGGEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGG 236
Query: 71 FAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTR 130
F ++ H YT +V L++ + + +D + + +I Q+ DG F G VDT
Sbjct: 237 FGAYPFNEAHGGYTFCSVAALSILNSLHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTC 296
Query: 131 FSY 133
+SY
Sbjct: 297 YSY 299
>UNIPROTKB|F1SA56 [details] [associations]
symbol:CHURC1-FNTB "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:CU655896 Ensembl:ENSSSCT00000002539 Uniprot:F1SA56
Length = 336
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 60/177 (33%), Positives = 89/177 (50%)
Query: 57 VISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQ 113
V ++ CQ GGF G G PH+ T +AV L + + D+++ +K+ Y+ L+
Sbjct: 25 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLK 84
Query: 114 NEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGG 173
DGSF + GEVD R +Y A S+ + + E+I C+N +GG G PG
Sbjct: 85 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIVTPDLFEGTAEWIARCQNWEGGIGGVPGM 144
Query: 174 ESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVGIFS 229
E+H G FC + AL I ++ L W+ RQ++ GG GR KL D G +S
Sbjct: 145 EAHGGYTFCGLAALVILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNKLVD-GCYS 200
Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
Identities = 47/199 (23%), Positives = 77/199 (38%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
+K ++Y+ S+++ SF V + + AY + + + E WI +CQ+
Sbjct: 74 EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIVTPDLFEGTAEWIARCQN 133
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNE-DGSFSGDIWG 125
GG G G + H YT + L + K L+ + ++ Q +G F G
Sbjct: 134 WEGGIGGVPGMEAHGGYTFCGLAALVILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNK 193
Query: 126 EVDTRFSYIAICCLSILQRLDKINVDKAV-------------EYIVSCKNLDGGFGCTPG 172
VD +S+ L +L R D A+ EYI+ C G
Sbjct: 194 LVDGCYSFWQAGLLPLLHRALHAQGDPALSMSRWMFHQQALQEYILMCCQCPAGGLLDKP 253
Query: 173 GESHSGQIFC-CVGALAIA 190
G+S C C+ L+IA
Sbjct: 254 GKSRDFYHTCYCLSGLSIA 272
>TAIR|locus:2039752 [details] [associations]
symbol:PGGT-I species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IMP;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018344 "protein geranylgeranylation" evidence=IMP;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 GO:GO:0009737
EMBL:CP002685 GO:GO:0009733 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0009414 EMBL:AC004218 GO:GO:0009788 eggNOG:COG5029
GO:GO:0004662 GO:GO:0018344 KO:K11713 HSSP:P53610 OMA:PDLYHSY
EMBL:BT002465 EMBL:BT008464 IPI:IPI00537488 PIR:T00565
RefSeq:NP_181487.1 UniGene:At.16938 ProteinModelPortal:O80642
SMR:O80642 STRING:O80642 PaxDb:O80642 PRIDE:O80642
EnsemblPlants:AT2G39550.1 GeneID:818540 KEGG:ath:AT2G39550
TAIR:At2g39550 InParanoid:O80642 PhylomeDB:O80642
ProtClustDB:CLSN2683354 BioCyc:MetaCyc:AT2G39550-MONOMER
ArrayExpress:O80642 Genevestigator:O80642 Uniprot:O80642
Length = 375
Score = 213 (80.0 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 52/166 (31%), Positives = 81/166 (48%)
Query: 73 GNIGHD-PHVLYTLSAVQVLALFDK-VDILDADKVSNYIVGLQNEDGSFSG-DIWGEVDT 129
G++ H+ H+ T A+ +L + + +D+ + ++ LQ +DGSF I GE D
Sbjct: 126 GDLKHNGSHLASTYCALAILKVIGHDLSTIDSKSLLISMINLQQDDGSFMPIHIGGETDL 185
Query: 130 RFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAI 189
RF Y A +L ++ + A YI++C++ DGGFG PG ESH G +C + +L +
Sbjct: 186 RFVYCAAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAIASLRL 245
Query: 190 AGAL-----------HHVDKDLLGWWLCERQVKSGGLNGRPEKLPD 224
G + +D LL W +RQ GG GR K D
Sbjct: 246 MGYIGVDLLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSD 291
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 33 LNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAG-NIGHDPHVLYTLSAVQV 90
L Y L L ++G L +D + ++ ++ Q + G F +IG + + + A +
Sbjct: 135 LASTYCALAILKVIGHDLSTIDSKSLLISMINLQQDDGSFMPIHIGGETDLRFVYCAAAI 194
Query: 91 LALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAICCLSILQRL--DK 147
+ D +D + NYI+ Q+ DG F G I G E +Y AI L ++ + D
Sbjct: 195 CYMLDSWSGMDKESAKNYILNCQSYDGGF-GLIPGSESHGGATYCAIASLRLMGYIGVDL 253
Query: 148 INVDKA---------VEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDK 198
++ D + + + + + DGGF S + F L + G +DK
Sbjct: 254 LSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDALIDK 313
Query: 199 DLLGWWLCERQVKSGGLNGRPEKLPDV 225
L +L Q K GG + P +LPD+
Sbjct: 314 MALRKFLMSCQSKYGGFSKFPGQLPDL 340
Score = 66 (28.3 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 7 DKHVKYI-ISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+H+ Y+ + E ++S + L L A++ ++ L LG D VD++ V W+L Q
Sbjct: 38 DRHLMYLEMMYELLPYHYQSQEINRLTL--AHFIISGLHFLGARDRVDKDVVAKWVLSFQ 95
>UNIPROTKB|F1NE58 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:AADN02074198 EMBL:AADN02074199 EMBL:AADN02074200
EMBL:AADN02074201 IPI:IPI00575455 Ensembl:ENSGALT00000013349
Uniprot:F1NE58
Length = 332
Score = 185 (70.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 50/151 (33%), Positives = 74/151 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ D + + LQ EDGSF + G E D RF Y A C
Sbjct: 75 HIAMTYTGLSCLVILGDDLSRVNKDALLAGLRALQLEDGSFCAVLEGSENDMRFVYCASC 134
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA++YI + D G G ESH G FC + +L + G L V
Sbjct: 135 ICYMLDNWSGMDMKKAIDYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 194
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L +G W RQ G +GRP K D
Sbjct: 195 SEKELSRIGRWCVMRQ--QNGYHGRPNKPVD 223
Score = 79 (32.9 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 32 RLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 1 RLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 34
>FB|FBgn0038424 [details] [associations]
symbol:CG17565 species:7227 "Drosophila melanogaster"
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 EMBL:AE014297
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004663 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:AY051869 RefSeq:NP_650540.1 UniGene:Dm.4459 HSSP:Q02293
SMR:Q9VEV7 STRING:Q9VEV7 EnsemblMetazoa:FBtr0083286 GeneID:41989
KEGG:dme:Dmel_CG17565 UCSC:CG17565-RA FlyBase:FBgn0038424
InParanoid:Q9VEV7 OrthoDB:EOG4NP5JX GenomeRNAi:41989 NextBio:826605
Uniprot:Q9VEV7
Length = 419
Score = 246 (91.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 60/201 (29%), Positives = 92/201 (45%)
Query: 37 YWGLTTLDILG-KLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFD 95
YW L +L D V+ ++ C+ +GGF G G H+ T +AV L +
Sbjct: 92 YWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIG 151
Query: 96 KVDI---LDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDK 152
+D + ++ +++ DGSF + GE D R +Y AI C +L + + +
Sbjct: 152 SEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKEL 211
Query: 153 AV---EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ 209
++I C+ +GGFG PG E+H G FC + LA+ D+ L W RQ
Sbjct: 212 FAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQ 271
Query: 210 VK-SGGLNGRPEKLPDVGIFS 229
+ GG GR KL D G +S
Sbjct: 272 MTYEGGFQGRTNKLVD-GCYS 291
Score = 130 (50.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 49/178 (27%), Positives = 75/178 (42%)
Query: 10 VKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE---DVISWILKCQD 66
V+++ SV SF V + GAY ++ +L + V +E WI +CQ
Sbjct: 165 VQFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQT 224
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQ-NEDGSFSGDIWG 125
GGF G G + H YT + LAL ++ D D + + + Q +G F G
Sbjct: 225 YEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGGFQGRTNK 284
Query: 126 EVDTRFSYIAICCLSILQR----LDK------INVDKAVEYIV-SCKNLDGGFGCTPG 172
VD +S+ + I Q +DK +V+ EYI+ C+ GG PG
Sbjct: 285 LVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEALQEYILLCCQKQSGGLIDKPG 342
>ASPGD|ASPL0000050108 [details] [associations]
symbol:AN2002 species:162425 "Emericella nidulans"
[GO:0004660 "protein farnesyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0010958 "regulation of amino acid
import" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 EMBL:BN001307
GO:GO:0042127 GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 ProteinModelPortal:C8VLC9
EnsemblFungi:CADANIAT00008669 OMA:CEGGEED Uniprot:C8VLC9
Length = 519
Score = 212 (79.7 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 72/249 (28%), Positives = 110/249 (44%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
L D H+ Y+ S+E F V M+ R YW L L +LG+ + E I+ I
Sbjct: 122 LMRDVHIGYLCDSLEDYPPGF--VAMDASRPWMIYWALAALSLLGEDLSRHRERAIATIT 179
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGSF 119
Q+ +GGF G G H + +AV LA+ + +++D + ++ L+ DG
Sbjct: 180 PMQNPTGGFGGGHGQISHCASSYAAVLSLAMVGGEEAFNLIDRQAMWKWLGKLKQPDGGI 239
Query: 120 SGDIWGEVDTRFSYIAICCLSILQ---------RLDKINV----DKAVEYIVSCKNLDGG 166
+ GE D R +Y A+ +S+L + + + D EY+ C+ +GG
Sbjct: 240 TVCEGGEEDVRGAYCAMVIISLLNLPLTLPPEAKAREYGLETFTDGLWEYLSRCQTFEGG 299
Query: 167 FGCTPGGESHSGQIFCCVGALAIAGALHH-----VDKDLLGWWLCERQ-VKSGGLNGRPE 220
+PG E+H FC + L I G +D +L WL RQ GG GR
Sbjct: 300 ISGSPGSEAHGAYAFCALACLCILGEPEATIPKCMDVQMLLSWLSARQYAPEGGFAGRTN 359
Query: 221 KLPDVGIFS 229
KL D G +S
Sbjct: 360 KLVD-GCYS 367
Score = 46 (21.3 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 209 QVKSGGLNGRPEKLPD 224
Q K+GGL +P K PD
Sbjct: 412 QSKNGGLRDKPGKHPD 427
>GENEDB_PFALCIPARUM|PF11_0483 [details] [associations]
symbol:PF11_0483 "farnesyltransferase beta
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004660 "protein
farnesyltransferase activity" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 234 (87.4 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 72/240 (30%), Positives = 114/240 (47%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE---DVIS 59
+L H K+ + + K+ + + +E + YW + ++ IL ++E+
Sbjct: 422 QLEKQLHFKFCLDIFFLKN-MKLISLEASKPWIFYWCIHSIHILYNTFEIEEKIGKPTFD 480
Query: 60 WILKC--------QDESGGFAGNIGHDPHVLYTLSAVQV-LALFDK----VDILDADKVS 106
+I KC ++ GGF G + H+ T +AV V + L D+ + LD K+
Sbjct: 481 YIKKCVFLYLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLH 540
Query: 107 NYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVE-YIVSCKNLDG 165
+YI+ L+ DGSF I GE+D R +Y AI S+ L V K VE YI++C+N +G
Sbjct: 541 SYILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTN-EVKKNVEKYILTCQNYEG 599
Query: 166 GFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPD 224
GF E H G +C + L I G ++ ++ L WL +Q G GR KL D
Sbjct: 600 GFTSEKFQECHGGYSYCALATLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVD 659
>UNIPROTKB|Q8IHP6 [details] [associations]
symbol:PF11_0483 "Farnesyltransferase beta subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004660
"protein farnesyltransferase activity" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 234 (87.4 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 72/240 (30%), Positives = 114/240 (47%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE---DVIS 59
+L H K+ + + K+ + + +E + YW + ++ IL ++E+
Sbjct: 422 QLEKQLHFKFCLDIFFLKN-MKLISLEASKPWIFYWCIHSIHILYNTFEIEEKIGKPTFD 480
Query: 60 WILKC--------QDESGGFAGNIGHDPHVLYTLSAVQV-LALFDK----VDILDADKVS 106
+I KC ++ GGF G + H+ T +AV V + L D+ + LD K+
Sbjct: 481 YIKKCVFLYLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLH 540
Query: 107 NYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVE-YIVSCKNLDG 165
+YI+ L+ DGSF I GE+D R +Y AI S+ L V K VE YI++C+N +G
Sbjct: 541 SYILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTN-EVKKNVEKYILTCQNYEG 599
Query: 166 GFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPD 224
GF E H G +C + L I G ++ ++ L WL +Q G GR KL D
Sbjct: 600 GFTSEKFQECHGGYSYCALATLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVD 659
>SGD|S000002248 [details] [associations]
symbol:RAM1 "Beta subunit of the CAAX farnesyltransferase
(FTase)" species:4932 "Saccharomyces cerevisiae" [GO:0005965
"protein farnesyltransferase complex" evidence=IEA;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 SGD:S000002248
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 EMBL:BK006938
GO:GO:0042127 GO:GO:0018343 EMBL:X95644 eggNOG:COG5029
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:YWIANSL
OrthoDB:EOG4ZPJ4B EMBL:M22753 EMBL:Z74138 EMBL:AY692971 PIR:S67626
RefSeq:NP_010193.1 ProteinModelPortal:P22007 SMR:P22007
DIP:DIP-1556N IntAct:P22007 MINT:MINT-396276 STRING:P22007
PaxDb:P22007 EnsemblFungi:YDL090C GeneID:851468 KEGG:sce:YDL090C
CYGD:YDL090c BindingDB:P22007 ChEMBL:CHEMBL4122 NextBio:968756
Genevestigator:P22007 GermOnline:YDL090C Uniprot:P22007
Length = 431
Score = 223 (83.6 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 57/202 (28%), Positives = 98/202 (48%)
Query: 37 YWGLTTLDILGK--LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF 94
YW +L ++ + L + ++ + G F G G H+ T +A+ L+L
Sbjct: 111 YWIANSLKVMDRDWLSDDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSLC 170
Query: 95 DKVD----ILDADKVSNYIVGLQNEDGSFSGDIW-GEVDTRFSYIAICCLSILQRLDKIN 149
D +D +D + +++ L+ +G F + GEVDTR Y A+ ++L L +
Sbjct: 171 DNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEEL 230
Query: 150 VDKAVEYIVSCKNLDGGFGCTPG-GESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCER 208
+ + Y+ +C+N +GGFG P E+H G FC +LAI ++ ++ + L W R
Sbjct: 231 TEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSAR 290
Query: 209 QVKSG-GLNGRPEKLPDVGIFS 229
Q++ G GR KL D G +S
Sbjct: 291 QLQEERGFCGRSNKLVD-GCYS 311
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00058
Identities = 46/189 (24%), Positives = 83/189 (43%)
Query: 11 KYIISVEKKKDSFESVV-MEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESG 69
+++IS+++ F++ + + + G Y L+ +L L E V++++ CQ+ G
Sbjct: 187 QWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEG 246
Query: 70 GFAGNIGH--DPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQ-NEDGSFSGDIWGE 126
GF G+ H + H YT A LA+ +D ++ +K+ + Q E+ F G
Sbjct: 247 GF-GSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSARQLQEERGFCGRSNKL 305
Query: 127 VDTRFSYIAICCLSILQRLDK---INVDKAVEYIVSC--KNLDGGFGCTPGGESHSGQIF 181
VD +S+ +IL+ N +YI+ C + G PG S
Sbjct: 306 VDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYHTN 365
Query: 182 CCVGALAIA 190
C+ LA+A
Sbjct: 366 YCLLGLAVA 374
>RGD|621754 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I, beta
subunit" species:10116 "Rattus norvegicus" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=TAS] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 168 (64.2 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 49/151 (32%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 269
Score = 89 (36.4 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|P53610 [details] [associations]
symbol:Pggt1b "Geranylgeranyl transferase type-1 subunit
beta" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 168 (64.2 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 49/151 (32%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 269
Score = 89 (36.4 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>MGI|MGI:1917514 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I,
beta subunit" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=ISO] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042277 "peptide
binding" evidence=ISO] [GO:0045787 "positive regulation of cell
cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=ISO] InterPro:IPR001330 Pfam:PF00432
MGI:MGI:1917514 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008284 GO:GO:0008270 GO:GO:0034097
GO:GO:0008152 GO:GO:0042277 GO:GO:0045787 eggNOG:COG5029
GO:GO:0004662 GO:GO:0019840 GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:AK081731 IPI:IPI00225757 RefSeq:NP_766215.1
UniGene:Mm.262096 UniGene:Mm.393044 ProteinModelPortal:Q8BUY9
SMR:Q8BUY9 STRING:Q8BUY9 PhosphoSite:Q8BUY9 PaxDb:Q8BUY9
PRIDE:Q8BUY9 Ensembl:ENSMUST00000025354 GeneID:225467
KEGG:mmu:225467 UCSC:uc008evk.1 InParanoid:Q8BUY9 BindingDB:Q8BUY9
ChEMBL:CHEMBL2295 NextBio:377678 Bgee:Q8BUY9 Genevestigator:Q8BUY9
GermOnline:ENSMUSG00000024477 Uniprot:Q8BUY9
Length = 377
Score = 167 (63.8 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 49/151 (32%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLIILGDDLGRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 269
Score = 89 (36.4 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|F1N4H5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152
GeneTree:ENSGT00530000063392 IPI:IPI00715065 OMA:FILSTQD
EMBL:DAAA02027677 EMBL:DAAA02027678 EMBL:DAAA02027679
EMBL:DAAA02027680 Ensembl:ENSBTAT00000002466 Uniprot:F1N4H5
Length = 377
Score = 164 (62.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 48/151 (31%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 269
Score = 89 (36.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|Q5EAD5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152
eggNOG:COG5029 GO:GO:0004662 EMBL:BT020634 IPI:IPI00715065
RefSeq:NP_001015560.1 UniGene:Bt.17618 ProteinModelPortal:Q5EAD5
SMR:Q5EAD5 PRIDE:Q5EAD5 GeneID:509322 KEGG:bta:509322 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 InParanoid:Q5EAD5 KO:K11713
BindingDB:Q5EAD5 ChEMBL:CHEMBL4347 NextBio:20868922 Uniprot:Q5EAD5
Length = 377
Score = 164 (62.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 48/151 (31%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 269
Score = 89 (36.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|P53609 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=TAS] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144
GO:GO:0008284 GO:GO:0008270 GO:GO:0034097 GO:GO:0042277
GO:GO:0045787 eggNOG:COG5029 DrugBank:DB00175 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 GO:GO:0019840 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
EMBL:L25441 EMBL:AY780790 EMBL:AC008494 IPI:IPI00022759
IPI:IPI00549741 PIR:A53044 RefSeq:NP_005014.2 UniGene:Hs.254006
ProteinModelPortal:P53609 SMR:P53609 STRING:P53609
PhosphoSite:P53609 DMDM:259016302 PaxDb:P53609 PRIDE:P53609
DNASU:5229 Ensembl:ENST00000379615 Ensembl:ENST00000419445
GeneID:5229 KEGG:hsa:5229 UCSC:uc003kqw.4 UCSC:uc010jch.3
GeneCards:GC05M114575 H-InvDB:HIX0032034 HGNC:HGNC:8895
HPA:HPA030646 MIM:602031 neXtProt:NX_P53609 PharmGKB:PA33233
InParanoid:P53609 OrthoDB:EOG4KD6MC PhylomeDB:P53609
BindingDB:P53609 ChEMBL:CHEMBL4135 GenomeRNAi:5229 NextBio:20214
Bgee:P53609 CleanEx:HS_PGGT1B Genevestigator:P53609
GermOnline:ENSG00000164219 Uniprot:P53609
Length = 377
Score = 163 (62.4 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 48/151 (31%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 269
Score = 89 (36.4 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>ZFIN|ZDB-GENE-050913-85 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase
type I, beta subunit" species:7955 "Danio rerio" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 ZFIN:ZDB-GENE-050913-85
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152
eggNOG:COG5029 CTD:5229 HOGENOM:HOG000180333 HOVERGEN:HBG008181
KO:K11713 OrthoDB:EOG4KD6MC EMBL:BC097132 IPI:IPI00484889
RefSeq:NP_001025426.1 UniGene:Dr.78336 ProteinModelPortal:Q4V8Z9
SMR:Q4V8Z9 GeneID:570808 KEGG:dre:570808 NextBio:20890306
ArrayExpress:Q4V8Z9 Uniprot:Q4V8Z9
Length = 355
Score = 165 (63.1 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 52/151 (34%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQ-VLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
HV T + + +L L D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 110 HVTMTYTGLACLLILGDDLGRVDRAACVSGLRALQLEDGSFYAVPEGSENDMRFVYCAAC 169
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L ++ K ++YI + D G G G ESH G FC V +L + G L V
Sbjct: 170 ICFMLDDWSGMDRQKTIDYIRRSTSFDFGIGQGAGLESHGGSTFCAVASLCMMGKLREVF 229
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+++L L W RQ G GRP K D
Sbjct: 230 SERELGRLRRWCVLRQ--QNGFQGRPNKPVD 258
Score = 82 (33.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 29 EHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
E RL A++ L+ LD+LG LD VD +I WI Q
Sbjct: 33 ETSRLTIAFFSLSGLDVLGALDVVDRHSLIEWIYSLQ 69
>UNIPROTKB|E2QZU5 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392 CTD:5229
KO:K11713 OMA:FILSTQD EMBL:AAEX03007707 RefSeq:XP_538560.2
ProteinModelPortal:E2QZU5 Ensembl:ENSCAFT00000000341 GeneID:481440
KEGG:cfa:481440 NextBio:20856233 Uniprot:E2QZU5
Length = 377
Score = 157 (60.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 47/151 (31%), Positives = 69/151 (45%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + L V
Sbjct: 181 ICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMDKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 269
Score = 89 (36.4 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>FB|FBgn0015000 [details] [associations]
symbol:betaggt-I "beta subunit of type I geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004661
"protein geranylgeranyltransferase activity" evidence=ISS]
[GO:0007265 "Ras protein signal transduction" evidence=ISS]
[GO:0004662 "CAAX-protein geranylgeranyltransferase activity"
evidence=NAS] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0022008 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0035050 GO:GO:0004661
HSSP:P53610 EMBL:U43587 ProteinModelPortal:Q24172 SMR:Q24172
STRING:Q24172 PaxDb:Q24172 PRIDE:Q24172 FlyBase:FBgn0015000
InParanoid:Q24172 OrthoDB:EOG489333 ArrayExpress:Q24172 Bgee:Q24172
Uniprot:Q24172
Length = 395
Score = 178 (67.7 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 49/150 (32%), Positives = 72/150 (48%)
Query: 80 HVLYTLSAVQVLA-LFDKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T +++ VL L D + LD + + + +Q +GSFS I G E D RF Y A
Sbjct: 112 HLAMTYTSLAVLVTLGDDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAAT 171
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVD 197
+L +N + ++I D GF GE+H G FC + AL ++G LH +D
Sbjct: 172 ICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLD 231
Query: 198 K---DLLGWWLCERQVKSGGLNGRPEKLPD 224
+ + WL RQ+ G GRP K D
Sbjct: 232 ATTVERMKRWLIFRQMD--GFQGRPNKPVD 259
Score = 42 (19.8 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 29 EHLRLNGAYWGLTTLDILGKLDAVD---EEDVISWI 61
++ R ++ + LD+L L V +D+I WI
Sbjct: 34 DNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWI 69
>DICTYBASE|DDB_G0269726 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase type
I" species:44689 "Dictyostelium discoideum" [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0004659 "prenyltransferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 dictyBase:DDB_G0269726
EMBL:AAFI02000005 GenomeReviews:CM000150_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152 eggNOG:COG5029
GO:GO:0004662 KO:K11713 RefSeq:XP_646228.1 HSSP:P53610
ProteinModelPortal:Q55DA3 GeneID:8617182 KEGG:ddi:DDB_G0269726
OMA:FILSTQD ProtClustDB:CLSZ2431398 Uniprot:Q55DA3
Length = 352
Score = 171 (65.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 50/159 (31%), Positives = 82/159 (51%)
Query: 73 GNIGHD-PHVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNE-DGSFSGDI-WGEVD 128
G + +D P T A+ +L + D ++ + + + Q E DG+ SG G+ D
Sbjct: 106 GPLEYDLPSTPNTYCALLILRILGDDFSGVNKKAIIDSLRKRQRESDGAISGSPNVGDYD 165
Query: 129 TRFSYIAICCLS-ILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGAL 187
R + A C +S IL IN + A++YI SC + + FG TP E+H G +C + +L
Sbjct: 166 LRHLFSA-CAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASL 224
Query: 188 AIAGALHHVD--KDLLGWWLCERQVKSGGLNGRPEKLPD 224
++ G L ++ K+ L +WL ++Q+ G GR K PD
Sbjct: 225 SLLGRLDVLEPFKEQLTFWLVKKQIT--GFCGRTNKDPD 261
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 10 VKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVD--EEDVISWILKCQDE 67
+ YI S + +F + Y + +L +LG+LD ++ +E + W++K Q
Sbjct: 191 IDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASLSLLGRLDVLEPFKEQLTFWLVKKQIT 250
Query: 68 SGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNED-GSFSGDIWGE 126
GF G DP Y L + D+ D++D ++ +I Q+E G + +
Sbjct: 251 --GFCGRTNKDPDTCYAFWIGASLMMIDRYDLIDFASINAFIGSAQHEAIGGVAKEPGQL 308
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNL 163
D SY+++ LS N+ +++ ++ C NL
Sbjct: 309 PDVMHSYLSLVGLSFG------NIP-SIQQVIPCLNL 338
Score = 58 (25.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 23 FESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE--DVISWILKCQ 65
+ S + HL L ++ ++ LD+L K D +++E D+I+W+ Q
Sbjct: 25 YTSGLPNHLSL--IFFVVSGLDLLNKTDILEKEKQDIINWVYSRQ 67
>UNIPROTKB|F1RLE8 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:CU693413 EMBL:CU694231 Ensembl:ENSSSCT00000015533
Uniprot:F1RLE8
Length = 318
Score = 164 (62.8 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 48/151 (31%), Positives = 70/151 (46%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 62 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 121
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 122 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 181
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPD 224
+K+L + W RQ G +GRP K D
Sbjct: 182 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVD 210
Score = 53 (23.7 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 45 ILGKLDAVDEEDVISWILKCQ 65
+L LD V+++D+I WI Q
Sbjct: 1 MLDSLDVVNKDDIIEWIYSLQ 21
>UNIPROTKB|O18197 [details] [associations]
symbol:Y48E1B.3 "Protein Y48E1B.3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152 EMBL:Z93393
GeneTree:ENSGT00530000063392 HOGENOM:HOG000180333 KO:K11713
HSSP:P53610 OMA:FILSTQD GeneID:174999 KEGG:cel:CELE_Y48E1B.3
CTD:174999 PIR:T27022 RefSeq:NP_001254397.1
ProteinModelPortal:O18197 SMR:O18197 DIP:DIP-26836N IntAct:O18197
MINT:MINT-1088947 EnsemblMetazoa:Y48E1B.3a UCSC:Y48E1B.3
WormBase:Y48E1B.3a NextBio:886354 ArrayExpress:O18197
Uniprot:O18197
Length = 360
Score = 170 (64.9 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 59/186 (31%), Positives = 86/186 (46%)
Query: 58 ISWILKCQDESG---GFAG-----NIGHDP-HVLYTLSAVQVLALF-DKVDILDADKVSN 107
I WI Q +G GF G N G+D ++ T SA+ LA+ D + +D +
Sbjct: 84 IDWIYGLQFTNGNVCGFRGSHSCENSGYDEANLAQTYSALLSLAILGDDLKKVDRKAILK 143
Query: 108 YIVGLQNEDGSF-SGDIWGEVDTRFSYIAICCLSILQRLDKINVD--KAVEYIVSCKNLD 164
+ Q ++G F S + E D RF + A+ IL + +D K ++ N+D
Sbjct: 144 TVKTAQRDNGCFWSQGVGSESDMRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNID 203
Query: 165 GGFGCTPGGESHSGQIFCCVGALAIAGAL--HHV----DKDLLGWWLCERQVKSGGLNGR 218
GG G PG ESH G FC + +LA++ L V D D L W ++Q G +GR
Sbjct: 204 GGIGQAPGDESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQ--DIGFHGR 261
Query: 219 PEKLPD 224
K PD
Sbjct: 262 AHK-PD 266
>WB|WBGene00013002 [details] [associations]
symbol:Y48E1B.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR001330
Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0008152 EMBL:Z93393 GeneTree:ENSGT00530000063392 KO:K11713
GeneID:174999 KEGG:cel:CELE_Y48E1B.3 CTD:174999
RefSeq:NP_001254398.1 ProteinModelPortal:B7WNB1 SMR:B7WNB1
EnsemblMetazoa:Y48E1B.3c.1 EnsemblMetazoa:Y48E1B.3c.2
WormBase:Y48E1B.3c ArrayExpress:B7WNB1 Uniprot:B7WNB1
Length = 883
Score = 160 (61.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 51/162 (31%), Positives = 77/162 (47%)
Query: 74 NIGHDP-HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSF-SGDIWGEVDTR 130
N G+D ++ T SA+ LA+ D + +D + + Q ++G F S + E D R
Sbjct: 631 NSGYDEANLAQTYSALLSLAILGDDLKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMR 690
Query: 131 FSYIAICCLSILQRLDKINVD--KAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALA 188
F + A+ IL + +D K ++ N+DGG G PG ESH G FC + +LA
Sbjct: 691 FVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLA 750
Query: 189 IAGAL--HHV----DKDLLGWWLCERQVKSGGLNGRPEKLPD 224
++ L V D D L W ++Q G +GR K PD
Sbjct: 751 LSNRLWTEEVLTRRDIDRLIRWAIQKQ--DIGFHGRAHK-PD 789
>POMBASE|SPAC2E1P5.04c [details] [associations]
symbol:cwg2 "geranylgeranyltransferase I beta subunit
Cwg2" species:4896 "Schizosaccharomyces pombe" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=NAS]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0009250 "glucan biosynthetic process" evidence=IMP] [GO:0018344
"protein geranylgeranylation" evidence=IC] [GO:0034411 "cell wall
(1->3)-beta-D-glucan biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071963
"establishment or maintenance of cell polarity regulating cell
shape" evidence=IMP] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=IDA] InterPro:IPR001330 Pfam:PF00432
PomBase:SPAC2E1P5.04c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006612 GO:GO:0071963 GO:GO:0034411
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180333 KO:K11713 EMBL:Z12155 PIR:S41686
RefSeq:NP_594142.1 ProteinModelPortal:P32434 STRING:P32434
EnsemblFungi:SPAC2E1P5.04c.1 GeneID:2541514 KEGG:spo:SPAC2E1P5.04c
OMA:HDLRFCY OrthoDB:EOG4WQ4BS NextBio:20802612 Uniprot:P32434
Length = 355
Score = 117 (46.2 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 78 DPHVLYTLSAVQ-VLALFDKVDILDADKVSNYIVGLQNEDGSFSG---DIWGEVDTRFSY 133
+P + T+ ++ +L L D + +D D + N++ + G F + D R Y
Sbjct: 94 EPQLAGTVFSICCLLFLGDNLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDMRQLY 153
Query: 134 IAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAI 189
+A S+L + +++YI SC+ +GGF P GE+H+G FC + + ++
Sbjct: 154 MATTIASLLD-FSLSDPLCSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSL 208
Score = 67 (28.6 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 204 WLCERQVKSGGLNGRPEK 221
WL RQ+ SGGLNGR K
Sbjct: 240 WLASRQLSSGGLNGRTNK 257
>SGD|S000003123 [details] [associations]
symbol:CDC43 "Beta subunit of geranylgeranyltransferase type
I" species:4932 "Saccharomyces cerevisiae" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=TAS] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=TAS] [GO:0004661
"protein geranylgeranyltransferase activity" evidence=IDA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004659
"prenyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030010 "establishment of cell polarity"
evidence=TAS] [GO:0018344 "protein geranylgeranylation"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 SGD:S000003123
GO:GO:0007264 EMBL:BK006941 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006874 GO:GO:0030010 EMBL:Z48618
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
HOGENOM:HOG000180333 KO:K11713 OrthoDB:EOG4WQ4BS EMBL:M31114
EMBL:M74109 EMBL:Z72677 PIR:A40875 RefSeq:NP_011360.1
ProteinModelPortal:P18898 SMR:P18898 DIP:DIP-1232N IntAct:P18898
MINT:MINT-396220 STRING:P18898 PaxDb:P18898 PeptideAtlas:P18898
EnsemblFungi:YGL155W GeneID:852722 KEGG:sce:YGL155W CYGD:YGL155w
OMA:TCYSWWC NextBio:972105 Genevestigator:P18898 GermOnline:YGL155W
Uniprot:P18898
Length = 376
Score = 120 (47.3 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 48/157 (30%), Positives = 74/157 (47%)
Query: 79 PHVLYTLSAVQVLALFDKVD-ILDADKVSNYIVGLQNED-GSF---------SGDIWGEV 127
P+ L+ L ++ +L ++ + ILD ++ ++ Q D GSF G
Sbjct: 104 PNTLFALLSMIMLRDYEYFETILDKRSLARFVSKCQRPDRGSFVSCLDYKTNCGSSVDSD 163
Query: 128 DTRFSYIAICCLSIL-----QRLDK-INVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIF 181
D RF YIA+ L I + D+ I+ +K + YI+S + +G FG E HSG
Sbjct: 164 DLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQCYNGAFGAH--NEPHSGYTS 221
Query: 182 CCVGALAIAGALHHV-DK---DLLGWWLCERQVKSGG 214
C + LA+ +L + DK D + W L RQV S G
Sbjct: 222 CALSTLALLSSLEKLSDKFKEDTITW-LLHRQVSSHG 257
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 244 244 0.00098 113 3 11 22 0.44 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 605 (64 KB)
Total size of DFA: 202 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.19u 0.19s 20.38t Elapsed: 00:00:01
Total cpu time: 20.20u 0.19s 20.39t Elapsed: 00:00:01
Start: Thu May 9 16:03:14 2013 End: Thu May 9 16:03:15 2013