Query 026028
Match_columns 244
No_of_seqs 381 out of 1616
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 03:56:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026028.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026028hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i3y_A Epididymal secretory gl 100.0 3.5E-34 1.2E-38 232.7 18.8 161 82-244 29-212 (215)
2 2v1m_A Glutathione peroxidase; 100.0 9E-34 3.1E-38 220.8 19.2 164 81-244 4-168 (169)
3 2f8a_A Glutathione peroxidase 100.0 1.1E-33 3.8E-38 228.8 18.4 165 80-244 18-208 (208)
4 2r37_A Glutathione peroxidase 100.0 1.5E-33 5.2E-38 227.8 18.8 159 83-243 12-193 (207)
5 2gs3_A PHGPX, GPX-4, phospholi 100.0 1.8E-33 6.1E-38 223.4 18.4 162 80-242 21-185 (185)
6 3dwv_A Glutathione peroxidase- 100.0 1E-33 3.5E-38 225.2 13.8 164 80-243 18-183 (187)
7 2obi_A PHGPX, GPX-4, phospholi 100.0 4E-33 1.4E-37 220.8 17.0 162 80-242 19-183 (183)
8 3kij_A Probable glutathione pe 100.0 6.5E-33 2.2E-37 219.1 17.7 159 80-243 10-170 (180)
9 2p5q_A Glutathione peroxidase 100.0 1.1E-32 3.7E-37 214.8 17.7 163 82-244 6-169 (170)
10 2vup_A Glutathione peroxidase- 100.0 3.2E-32 1.1E-36 217.0 17.0 165 80-244 20-186 (190)
11 2p31_A CL683, glutathione pero 100.0 4.1E-32 1.4E-36 214.8 16.1 159 80-243 21-181 (181)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 1.2E-31 4E-36 210.0 14.4 160 84-244 8-169 (171)
13 4g2e_A Peroxiredoxin; redox pr 100.0 2E-30 6.7E-35 200.7 10.6 134 82-229 4-138 (157)
14 3eyt_A Uncharacterized protein 100.0 5.1E-30 1.7E-34 197.5 11.3 146 84-244 2-153 (158)
15 3lor_A Thiol-disulfide isomera 100.0 2.1E-29 7.3E-34 194.3 13.4 149 84-244 5-156 (160)
16 4gqc_A Thiol peroxidase, perox 100.0 4.7E-31 1.6E-35 205.8 4.0 148 81-243 4-160 (164)
17 3fw2_A Thiol-disulfide oxidore 100.0 4.4E-29 1.5E-33 190.9 14.7 140 80-243 3-148 (150)
18 4hde_A SCO1/SENC family lipopr 100.0 1.9E-28 6.6E-33 192.0 14.8 154 83-243 7-170 (170)
19 3lwa_A Secreted thiol-disulfid 100.0 2.3E-28 7.8E-33 193.1 15.0 144 81-244 30-182 (183)
20 3gkn_A Bacterioferritin comigr 100.0 8.4E-29 2.9E-33 192.0 12.1 143 81-236 6-151 (163)
21 4fo5_A Thioredoxin-like protei 100.0 3.3E-29 1.1E-33 190.2 9.0 135 80-239 5-141 (143)
22 3drn_A Peroxiredoxin, bacterio 100.0 1.6E-28 5.3E-33 190.4 12.3 134 82-236 2-138 (161)
23 3ewl_A Uncharacterized conserv 100.0 1.5E-28 5E-33 186.0 11.4 134 83-243 2-141 (142)
24 3u5r_E Uncharacterized protein 100.0 2.3E-28 7.7E-33 199.0 13.3 147 80-243 30-187 (218)
25 3fkf_A Thiol-disulfide oxidore 100.0 7E-28 2.4E-32 182.9 14.5 141 80-244 3-147 (148)
26 1xzo_A BSSCO, hypothetical pro 100.0 3.4E-28 1.1E-32 190.2 13.0 156 81-244 6-173 (174)
27 2f9s_A Thiol-disulfide oxidore 100.0 4.7E-28 1.6E-32 185.2 13.3 136 84-243 2-138 (151)
28 2lrn_A Thiol:disulfide interch 100.0 4E-28 1.4E-32 186.0 12.3 138 82-243 3-141 (152)
29 3or5_A Thiol:disulfide interch 100.0 1.2E-27 4.1E-32 185.2 13.9 145 81-244 7-152 (165)
30 2l5o_A Putative thioredoxin; s 100.0 1.5E-27 5.1E-32 182.5 13.9 139 83-244 3-142 (153)
31 3eur_A Uncharacterized protein 100.0 6.1E-28 2.1E-32 182.9 11.4 130 81-236 4-137 (142)
32 3ixr_A Bacterioferritin comigr 99.9 4.3E-28 1.5E-32 191.4 10.6 143 81-236 20-167 (179)
33 2ggt_A SCO1 protein homolog, m 99.9 1.1E-27 3.7E-32 185.4 12.5 153 87-244 2-162 (164)
34 2ywi_A Hypothetical conserved 99.9 1.4E-27 4.7E-32 190.4 12.9 146 81-243 17-174 (196)
35 1jfu_A Thiol:disulfide interch 99.9 4E-27 1.4E-31 186.3 15.0 145 80-243 32-180 (186)
36 3hcz_A Possible thiol-disulfid 99.9 2.3E-27 7.8E-32 180.1 13.0 140 81-242 4-145 (148)
37 2lrt_A Uncharacterized protein 99.9 2.3E-27 7.8E-32 182.2 12.7 138 80-242 7-144 (152)
38 2cvb_A Probable thiol-disulfid 99.9 2.4E-27 8.1E-32 188.0 13.0 145 81-243 6-159 (188)
39 3raz_A Thioredoxin-related pro 99.9 2.3E-27 7.8E-32 181.6 12.2 136 88-243 3-140 (151)
40 2rli_A SCO2 protein homolog, m 99.9 2.1E-27 7.2E-32 185.1 12.0 150 89-243 7-164 (171)
41 2c0d_A Thioredoxin peroxidase 99.9 4E-27 1.4E-31 192.0 13.9 143 80-242 23-183 (221)
42 3gl3_A Putative thiol:disulfid 99.9 9.3E-27 3.2E-31 177.9 14.6 137 82-243 3-142 (152)
43 1we0_A Alkyl hydroperoxide red 99.9 9E-27 3.1E-31 184.8 15.0 142 83-243 2-157 (187)
44 3kcm_A Thioredoxin family prot 99.9 4.9E-27 1.7E-31 179.8 12.6 138 83-243 3-143 (154)
45 3kh7_A Thiol:disulfide interch 99.9 4E-27 1.4E-31 185.3 12.4 138 78-243 26-167 (176)
46 2bmx_A Alkyl hydroperoxidase C 99.9 1E-26 3.6E-31 185.8 14.6 142 81-242 3-169 (195)
47 1n8j_A AHPC, alkyl hydroperoxi 99.9 3.4E-27 1.2E-31 187.4 11.6 141 83-242 2-155 (186)
48 3me7_A Putative uncharacterize 99.9 7.4E-27 2.5E-31 182.8 13.2 154 83-243 2-162 (170)
49 2yzh_A Probable thiol peroxida 99.9 9.4E-27 3.2E-31 182.1 13.0 144 81-242 20-171 (171)
50 1xvw_A Hypothetical protein RV 99.9 6E-27 2.1E-31 180.8 11.3 132 82-232 9-144 (160)
51 2lja_A Putative thiol-disulfid 99.9 2.8E-26 9.6E-31 175.2 14.6 139 82-243 3-143 (152)
52 3erw_A Sporulation thiol-disul 99.9 1.4E-26 4.8E-31 175.0 12.4 135 80-236 7-141 (145)
53 1zof_A Alkyl hydroperoxide-red 99.9 1.3E-26 4.4E-31 185.6 12.7 140 83-242 2-160 (198)
54 2k6v_A Putative cytochrome C o 99.9 7.4E-28 2.5E-32 187.7 5.1 154 82-242 10-172 (172)
55 2i81_A 2-Cys peroxiredoxin; st 99.9 1.1E-26 3.6E-31 188.5 12.0 142 81-242 20-179 (213)
56 1psq_A Probable thiol peroxida 99.9 1.5E-26 5.1E-31 179.7 11.8 129 81-229 15-145 (163)
57 1uul_A Tryparedoxin peroxidase 99.9 2E-26 6.7E-31 185.2 12.8 143 81-242 5-164 (202)
58 1q98_A Thiol peroxidase, TPX; 99.9 1.3E-26 4.6E-31 180.4 11.4 131 81-228 16-148 (165)
59 3ha9_A Uncharacterized thiored 99.9 8.6E-27 3E-31 180.8 10.2 142 80-243 9-164 (165)
60 2a4v_A Peroxiredoxin DOT5; yea 99.9 8.3E-27 2.9E-31 180.2 9.9 133 81-234 6-141 (159)
61 2pn8_A Peroxiredoxin-4; thiore 99.9 1.3E-26 4.5E-31 187.7 11.5 143 81-242 18-176 (211)
62 2b5x_A YKUV protein, TRXY; thi 99.9 1.4E-26 4.8E-31 175.5 10.9 142 83-244 2-146 (148)
63 3p7x_A Probable thiol peroxida 99.9 1.5E-26 5E-31 180.2 11.1 127 81-228 19-147 (166)
64 3ztl_A Thioredoxin peroxidase; 99.9 1.2E-26 4.1E-31 189.3 10.6 135 80-233 38-183 (222)
65 2h01_A 2-Cys peroxiredoxin; th 99.9 2.9E-26 1E-30 182.6 12.6 140 83-242 1-158 (192)
66 2b7k_A SCO1 protein; metalloch 99.9 2.4E-26 8.1E-31 184.5 11.8 159 80-243 11-179 (200)
67 1zye_A Thioredoxin-dependent p 99.9 5.9E-26 2E-30 184.9 14.0 143 81-242 26-184 (220)
68 3zrd_A Thiol peroxidase; oxido 99.9 3.4E-26 1.2E-30 183.8 11.8 132 81-229 51-184 (200)
69 3ia1_A THIO-disulfide isomeras 99.9 1.2E-26 4E-31 177.8 8.3 140 81-243 4-144 (154)
70 1qmv_A Human thioredoxin perox 99.9 6.5E-26 2.2E-30 181.4 12.8 143 81-242 4-162 (197)
71 3tjj_A Peroxiredoxin-4; thiore 99.9 2.6E-26 8.9E-31 190.8 10.7 133 79-230 59-202 (254)
72 3mng_A Peroxiredoxin-5, mitoch 99.9 1.5E-26 5.1E-31 181.7 8.7 138 79-230 12-157 (173)
73 3qpm_A Peroxiredoxin; oxidored 99.9 3.4E-26 1.2E-30 188.7 11.2 132 80-230 46-188 (240)
74 1xvq_A Thiol peroxidase; thior 99.9 7.1E-26 2.4E-30 178.0 12.4 144 81-243 17-165 (175)
75 1zzo_A RV1677; thioredoxin fol 99.9 1.1E-25 3.8E-30 168.0 12.7 133 85-244 2-136 (136)
76 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.5E-26 5.3E-31 179.6 8.2 133 82-229 4-146 (162)
77 2hyx_A Protein DIPZ; thioredox 99.9 2.8E-26 9.6E-31 198.7 10.3 145 80-243 49-199 (352)
78 3sbc_A Peroxiredoxin TSA1; alp 99.9 2.7E-26 9.1E-31 185.0 9.3 126 82-226 23-159 (216)
79 2jsy_A Probable thiol peroxida 99.9 1.8E-26 6.1E-31 179.6 7.9 143 81-243 17-167 (167)
80 3hdc_A Thioredoxin family prot 99.9 7E-26 2.4E-30 174.6 11.1 134 80-240 13-146 (158)
81 3tue_A Tryparedoxin peroxidase 99.9 6.4E-26 2.2E-30 183.1 11.2 128 81-226 25-163 (219)
82 1lu4_A Soluble secreted antige 99.9 1.6E-25 5.3E-30 167.5 12.3 131 86-243 2-136 (136)
83 1prx_A HORF6; peroxiredoxin, h 99.9 1.5E-25 5.1E-30 183.1 12.1 148 81-242 4-168 (224)
84 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 6.3E-26 2.2E-30 177.2 9.2 134 82-230 3-143 (167)
85 3uma_A Hypothetical peroxiredo 99.9 4.6E-26 1.6E-30 180.6 8.4 135 81-230 25-168 (184)
86 4evm_A Thioredoxin family prot 99.9 5.6E-25 1.9E-29 164.1 13.1 135 87-241 1-137 (138)
87 2b1k_A Thiol:disulfide interch 99.9 1.9E-25 6.4E-30 173.7 10.4 137 80-243 20-160 (168)
88 2v2g_A Peroxiredoxin 6; oxidor 99.9 2.4E-25 8.3E-30 182.6 11.1 148 82-242 3-164 (233)
89 2h30_A Thioredoxin, peptide me 99.9 1.6E-25 5.6E-30 173.0 7.4 139 84-243 16-156 (164)
90 2ls5_A Uncharacterized protein 99.9 9.6E-27 3.3E-31 179.5 0.0 139 81-242 6-147 (159)
91 1xcc_A 1-Cys peroxiredoxin; un 99.9 4.1E-25 1.4E-29 180.0 9.6 148 82-242 3-165 (220)
92 1kng_A Thiol:disulfide interch 99.9 4.3E-25 1.5E-29 169.2 9.0 137 80-243 6-152 (156)
93 3keb_A Probable thiol peroxida 99.9 4.7E-24 1.6E-28 173.0 14.1 142 81-242 21-175 (224)
94 3a2v_A Probable peroxiredoxin; 99.9 1.1E-24 3.8E-29 180.0 10.4 143 82-242 5-161 (249)
95 2pwj_A Mitochondrial peroxired 99.9 9.6E-25 3.3E-29 171.1 9.3 135 81-230 6-155 (171)
96 1nm3_A Protein HI0572; hybrid, 99.9 3.2E-24 1.1E-28 176.8 10.2 136 82-232 3-146 (241)
97 4eo3_A Bacterioferritin comigr 99.9 9.4E-24 3.2E-28 181.1 11.0 126 86-236 2-128 (322)
98 1i5g_A Tryparedoxin II; electr 99.9 6.6E-24 2.3E-28 160.9 6.4 120 84-226 3-126 (144)
99 3s9f_A Tryparedoxin; thioredox 99.9 2.3E-24 8E-29 167.7 2.3 124 80-227 20-147 (165)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.9 2.6E-23 8.9E-28 158.0 5.9 121 83-227 3-127 (146)
101 2lus_A Thioredoxion; CR-Trp16, 99.8 4.5E-24 1.6E-28 161.1 0.0 122 86-228 2-127 (143)
102 4f82_A Thioredoxin reductase; 99.9 1.5E-22 5E-27 158.4 7.7 134 81-229 9-158 (176)
103 1o73_A Tryparedoxin; electron 99.9 5.4E-23 1.9E-27 155.6 4.8 121 83-227 3-127 (144)
104 2xhf_A Peroxiredoxin 5; oxidor 99.9 1.2E-21 4.2E-26 152.8 11.1 134 81-229 13-152 (171)
105 1xiy_A Peroxiredoxin, pfaop; a 99.8 2.9E-21 1E-25 152.3 8.7 131 83-228 2-153 (182)
106 2l57_A Uncharacterized protein 99.7 1.4E-17 4.9E-22 123.0 8.1 110 87-243 5-117 (126)
107 2fwh_A Thiol:disulfide interch 99.7 1.7E-18 5.9E-23 129.7 3.1 116 82-241 4-126 (134)
108 3hxs_A Thioredoxin, TRXP; elec 99.7 8.3E-17 2.8E-21 121.1 9.4 105 92-244 35-140 (141)
109 2ju5_A Thioredoxin disulfide i 99.7 6.9E-17 2.3E-21 123.9 6.9 121 84-244 26-153 (154)
110 3ul3_B Thioredoxin, thioredoxi 99.6 6E-16 2E-20 114.7 8.5 106 84-239 20-126 (128)
111 3p2a_A Thioredoxin 2, putative 99.6 2.1E-15 7.1E-20 114.5 8.6 113 83-243 30-143 (148)
112 3fk8_A Disulphide isomerase; A 99.6 1.6E-15 5.6E-20 112.9 7.4 96 106-242 27-132 (133)
113 3f9u_A Putative exported cytoc 99.6 1.9E-16 6.5E-21 123.3 0.9 121 101-243 40-166 (172)
114 3qfa_C Thioredoxin; protein-pr 99.5 7.7E-15 2.6E-19 106.9 6.0 89 104-242 27-116 (116)
115 2kuc_A Putative disulphide-iso 99.5 1.1E-14 3.8E-19 107.8 6.6 99 100-243 19-121 (130)
116 2trx_A Thioredoxin; electron t 99.5 4E-14 1.4E-18 101.2 8.7 89 107-243 19-108 (108)
117 2voc_A Thioredoxin; electron t 99.5 1.6E-14 5.5E-19 104.4 6.6 88 107-242 16-104 (112)
118 3tco_A Thioredoxin (TRXA-1); d 99.5 1.6E-14 5.5E-19 103.1 6.5 89 107-243 20-109 (109)
119 3zzx_A Thioredoxin; oxidoreduc 99.5 2.7E-14 9.2E-19 102.5 7.4 87 104-240 16-103 (105)
120 2dml_A Protein disulfide-isome 99.5 1.2E-13 4.1E-18 102.1 11.1 90 107-243 34-124 (130)
121 2l5l_A Thioredoxin; structural 99.5 4.5E-14 1.5E-18 105.7 8.8 89 107-243 37-126 (136)
122 2pu9_C TRX-F, thioredoxin F-ty 99.5 5.5E-14 1.9E-18 101.1 8.4 90 104-242 20-110 (111)
123 1nsw_A Thioredoxin, TRX; therm 99.5 1.1E-14 3.6E-19 103.7 4.5 88 107-242 16-104 (105)
124 2o8v_B Thioredoxin 1; disulfid 99.5 6.9E-14 2.4E-18 103.7 9.0 89 107-243 39-128 (128)
125 3cxg_A Putative thioredoxin; m 99.5 6.8E-15 2.3E-19 110.0 3.3 102 92-243 24-129 (133)
126 3die_A Thioredoxin, TRX; elect 99.5 3.6E-14 1.2E-18 100.8 6.9 88 107-242 18-106 (106)
127 1dby_A Chloroplast thioredoxin 99.5 9.4E-14 3.2E-18 99.0 9.1 89 107-243 18-107 (107)
128 1thx_A Thioredoxin, thioredoxi 99.5 1.4E-13 4.7E-18 99.3 9.8 102 94-243 10-113 (115)
129 3d6i_A Monothiol glutaredoxin- 99.5 1.5E-13 5.1E-18 99.0 9.9 89 107-243 20-109 (112)
130 1t00_A Thioredoxin, TRX; redox 99.5 6.5E-14 2.2E-18 100.8 8.0 89 107-243 22-111 (112)
131 3gix_A Thioredoxin-like protei 99.5 2.6E-14 8.7E-19 109.0 6.0 89 107-243 22-121 (149)
132 3f3q_A Thioredoxin-1; His TAG, 99.5 6.4E-14 2.2E-18 100.8 7.7 86 107-242 23-109 (109)
133 2e0q_A Thioredoxin; electron t 99.5 4.9E-14 1.7E-18 99.5 6.8 89 107-244 15-104 (104)
134 1x5d_A Protein disulfide-isome 99.5 1.1E-13 3.8E-18 102.5 9.0 90 107-243 24-117 (133)
135 1w4v_A Thioredoxin, mitochondr 99.5 9.5E-14 3.2E-18 101.4 8.4 88 107-242 30-118 (119)
136 2dj1_A Protein disulfide-isome 99.5 8.4E-14 2.9E-18 104.3 8.2 103 93-243 19-124 (140)
137 2ppt_A Thioredoxin-2; thiredox 99.5 5.5E-14 1.9E-18 107.8 7.2 89 107-243 63-152 (155)
138 2lst_A Thioredoxin; structural 99.2 3.1E-15 1E-19 110.9 0.0 101 98-243 9-116 (130)
139 4euy_A Uncharacterized protein 99.5 5.8E-14 2E-18 100.2 6.7 87 107-242 17-104 (105)
140 1ep7_A Thioredoxin CH1, H-type 99.5 1.4E-13 4.9E-18 98.9 8.8 88 108-244 24-112 (112)
141 2vlu_A Thioredoxin, thioredoxi 99.5 2.2E-14 7.6E-19 104.9 4.5 110 84-243 8-120 (122)
142 2dj3_A Protein disulfide-isome 99.5 9.2E-14 3.1E-18 103.2 7.9 108 90-243 6-118 (133)
143 2djj_A PDI, protein disulfide- 99.5 4.3E-14 1.5E-18 103.2 5.9 102 93-243 9-117 (121)
144 3qou_A Protein YBBN; thioredox 99.5 9.3E-14 3.2E-18 116.6 8.7 89 106-242 24-113 (287)
145 3hz4_A Thioredoxin; NYSGXRC, P 99.5 5.9E-14 2E-18 105.6 6.5 89 107-243 23-112 (140)
146 2i4a_A Thioredoxin; acidophIle 99.5 1.6E-13 5.6E-18 97.6 8.4 101 94-242 5-107 (107)
147 3d22_A TRXH4, thioredoxin H-ty 99.5 4.8E-14 1.7E-18 105.6 5.8 93 101-243 39-132 (139)
148 1fb6_A Thioredoxin M; electron 99.5 1.2E-13 4E-18 98.0 7.4 102 93-242 2-105 (105)
149 1sen_A Thioredoxin-like protei 99.5 1.1E-15 3.9E-20 118.4 -3.4 111 88-243 27-148 (164)
150 1xfl_A Thioredoxin H1; AT3G510 99.5 1.4E-13 4.9E-18 101.4 8.1 87 107-243 37-124 (124)
151 2av4_A Thioredoxin-like protei 99.5 2.5E-13 8.5E-18 103.3 9.5 89 107-243 40-139 (160)
152 1z6n_A Hypothetical protein PA 99.5 1.2E-13 4.2E-18 107.2 8.0 82 102-228 48-129 (167)
153 1x5e_A Thioredoxin domain cont 99.5 1.2E-13 4E-18 101.8 7.4 100 93-242 9-109 (126)
154 2j23_A Thioredoxin; immune pro 99.5 1.6E-13 5.3E-18 100.6 7.8 89 107-243 32-121 (121)
155 3gnj_A Thioredoxin domain prot 99.5 2.7E-13 9.4E-18 97.1 8.7 89 107-243 21-110 (111)
156 3m9j_A Thioredoxin; oxidoreduc 99.4 1.4E-13 4.9E-18 97.6 6.7 88 105-242 17-105 (105)
157 3apq_A DNAJ homolog subfamily 99.4 5E-14 1.7E-18 113.2 4.8 108 88-243 94-202 (210)
158 1faa_A Thioredoxin F; electron 99.4 2.2E-13 7.4E-18 100.0 7.6 89 105-242 34-123 (124)
159 2qsi_A Putative hydrogenase ex 99.4 6E-13 2E-17 99.3 10.0 87 109-243 34-123 (137)
160 2yzu_A Thioredoxin; redox prot 99.4 1.1E-13 3.6E-18 98.7 5.7 89 107-243 17-106 (109)
161 1ti3_A Thioredoxin H, PTTRXH1; 99.4 6.5E-13 2.2E-17 95.4 9.8 89 106-244 24-113 (113)
162 2qgv_A Hydrogenase-1 operon pr 99.4 7.8E-13 2.7E-17 99.1 9.5 90 107-243 33-125 (140)
163 1r26_A Thioredoxin; redox-acti 99.4 4.5E-13 1.5E-17 99.0 8.2 87 107-243 36-123 (125)
164 1v98_A Thioredoxin; oxidoreduc 99.4 6.6E-13 2.3E-17 99.6 9.2 103 93-243 35-138 (140)
165 3emx_A Thioredoxin; structural 99.4 2E-13 7E-18 102.0 6.3 92 107-243 31-126 (135)
166 2xc2_A Thioredoxinn; oxidoredu 99.4 2.1E-13 7.3E-18 99.0 5.8 88 104-242 29-117 (117)
167 2wz9_A Glutaredoxin-3; protein 99.4 4.9E-13 1.7E-17 102.1 7.8 87 107-243 31-118 (153)
168 2vim_A Thioredoxin, TRX; thior 99.4 5.5E-13 1.9E-17 94.3 7.3 88 105-242 16-104 (104)
169 1gh2_A Thioredoxin-like protei 99.4 8.4E-13 2.9E-17 94.2 8.1 86 107-242 20-106 (107)
170 1qgv_A Spliceosomal protein U5 99.4 1.1E-12 3.9E-17 99.0 9.0 43 107-150 22-64 (142)
171 2oe3_A Thioredoxin-3; electron 99.4 4.9E-13 1.7E-17 97.0 6.7 83 107-239 29-112 (114)
172 1syr_A Thioredoxin; SGPP, stru 99.4 5.6E-13 1.9E-17 96.1 6.9 86 107-242 25-111 (112)
173 2dj0_A Thioredoxin-related tra 99.4 2.4E-13 8E-18 101.8 5.0 89 106-235 24-112 (137)
174 1xwb_A Thioredoxin; dimerizati 99.4 1.2E-12 4E-17 92.9 8.2 89 105-242 17-106 (106)
175 2l6c_A Thioredoxin; oxidoreduc 99.4 7.1E-13 2.4E-17 95.4 7.1 86 107-241 18-104 (110)
176 1zma_A Bacterocin transport ac 99.4 7.4E-13 2.5E-17 96.4 7.0 88 107-238 28-116 (118)
177 2vm1_A Thioredoxin, thioredoxi 99.4 9.3E-13 3.2E-17 95.4 7.5 87 107-243 27-114 (118)
178 2f51_A Thioredoxin; electron t 99.4 1.4E-13 4.8E-18 100.5 3.1 100 93-241 5-111 (118)
179 3h79_A Thioredoxin-like protei 99.4 8.7E-13 3E-17 97.3 7.4 103 93-241 17-126 (127)
180 3dxb_A Thioredoxin N-terminall 99.4 7.8E-13 2.7E-17 107.2 7.8 106 90-243 11-118 (222)
181 1oaz_A Thioredoxin 1; immune s 99.4 7.3E-13 2.5E-17 97.5 6.4 88 107-242 20-122 (123)
182 2i1u_A Thioredoxin, TRX, MPT46 99.3 9.7E-13 3.3E-17 95.8 5.7 89 107-243 29-118 (121)
183 3uvt_A Thioredoxin domain-cont 99.3 3E-12 1E-16 91.5 8.1 87 107-240 20-109 (111)
184 3aps_A DNAJ homolog subfamily 99.3 7.3E-13 2.5E-17 96.7 4.7 89 107-243 20-113 (122)
185 1mek_A Protein disulfide isome 99.3 7.2E-13 2.4E-17 96.0 4.3 90 107-243 23-117 (120)
186 2yj7_A LPBCA thioredoxin; oxid 99.0 1.8E-13 6E-18 97.0 0.0 102 93-242 3-106 (106)
187 3idv_A Protein disulfide-isome 99.3 4.2E-12 1.4E-16 103.4 7.8 102 93-242 17-121 (241)
188 1fo5_A Thioredoxin; disulfide 99.3 1.9E-11 6.6E-16 83.1 9.4 82 109-242 3-85 (85)
189 2es7_A Q8ZP25_salty, putative 99.3 1.2E-11 4.2E-16 93.3 8.5 86 109-243 35-125 (142)
190 2dbc_A PDCL2, unnamed protein 99.3 5.4E-12 1.8E-16 94.3 6.2 82 107-240 29-118 (135)
191 1wmj_A Thioredoxin H-type; str 99.3 1.3E-12 4.3E-17 96.4 2.5 87 107-243 35-122 (130)
192 3ph9_A Anterior gradient prote 99.2 4.8E-13 1.6E-17 102.1 -0.6 77 106-229 42-120 (151)
193 1nho_A Probable thioredoxin; b 99.2 6.8E-12 2.3E-16 85.4 5.3 82 110-243 3-85 (85)
194 3t58_A Sulfhydryl oxidase 1; o 99.2 1.5E-11 5.3E-16 111.4 8.0 107 93-243 14-127 (519)
195 3q6o_A Sulfhydryl oxidase 1; p 99.2 3E-11 1E-15 99.1 8.8 91 107-243 29-127 (244)
196 1a8l_A Protein disulfide oxido 99.2 5.2E-11 1.8E-15 96.1 10.1 90 107-243 133-226 (226)
197 3ira_A Conserved protein; meth 99.2 3.1E-11 1.1E-15 94.0 7.7 52 98-150 29-83 (173)
198 3evi_A Phosducin-like protein 99.2 3.2E-11 1.1E-15 88.2 6.3 41 108-150 23-63 (118)
199 3iv4_A Putative oxidoreductase 99.1 9.2E-11 3.1E-15 84.2 6.6 83 108-236 24-108 (112)
200 2hls_A Protein disulfide oxido 99.1 2.6E-10 9E-15 93.6 9.6 88 105-243 135-226 (243)
201 1a0r_P Phosducin, MEKA, PP33; 99.1 1.2E-10 4.3E-15 95.6 7.3 42 107-150 132-173 (245)
202 2r2j_A Thioredoxin domain-cont 99.1 1.5E-10 5E-15 101.2 7.3 104 93-243 7-117 (382)
203 3ed3_A Protein disulfide-isome 99.1 1.9E-10 6.7E-15 97.2 7.8 91 107-242 34-141 (298)
204 3dml_A Putative uncharacterize 99.1 4.5E-11 1.6E-15 86.7 2.8 92 107-243 17-110 (116)
205 2dlx_A UBX domain-containing p 99.0 1.3E-09 4.4E-14 83.1 10.4 91 107-243 41-136 (153)
206 1ilo_A Conserved hypothetical 99.0 1.2E-09 4.1E-14 72.7 8.9 37 111-148 2-38 (77)
207 3idv_A Protein disulfide-isome 99.0 4.5E-10 1.6E-14 91.2 8.2 89 107-243 146-237 (241)
208 2trc_P Phosducin, MEKA, PP33; 99.0 2.1E-10 7.2E-15 92.6 6.0 76 107-232 119-194 (217)
209 3f8u_A Protein disulfide-isome 99.0 4.9E-11 1.7E-15 107.1 2.3 89 107-242 369-460 (481)
210 1wou_A Thioredoxin -related pr 99.0 2.4E-10 8.2E-15 83.7 5.2 46 104-150 20-72 (123)
211 3kp8_A Vkorc1/thioredoxin doma 99.0 5E-12 1.7E-16 90.7 -4.5 40 99-138 3-42 (106)
212 1sji_A Calsequestrin 2, calseq 99.0 1.2E-09 4E-14 94.3 9.4 87 107-242 27-121 (350)
213 2b5e_A Protein disulfide-isome 99.0 5E-10 1.7E-14 101.1 6.9 89 107-242 30-121 (504)
214 4h86_A Peroxiredoxin type-2; o 99.0 1.6E-09 5.4E-14 85.3 8.4 132 80-228 24-180 (199)
215 3f8u_A Protein disulfide-isome 99.0 1.1E-09 3.9E-14 98.2 8.1 88 107-242 20-108 (481)
216 2ywm_A Glutaredoxin-like prote 98.9 2.3E-09 7.8E-14 86.7 8.3 85 107-243 135-220 (229)
217 3uem_A Protein disulfide-isome 98.9 8.9E-10 3E-14 95.2 6.1 86 107-240 266-354 (361)
218 3apo_A DNAJ homolog subfamily 98.9 2.2E-09 7.6E-14 101.8 9.0 92 103-243 450-542 (780)
219 3qcp_A QSOX from trypanosoma b 98.9 1.6E-09 5.6E-14 96.4 7.3 44 107-150 41-91 (470)
220 3gyk_A 27KDA outer membrane pr 98.9 2.2E-09 7.4E-14 83.3 6.7 50 98-149 12-61 (175)
221 2b5e_A Protein disulfide-isome 98.9 1.4E-09 4.8E-14 98.2 5.5 87 107-242 375-466 (504)
222 3apo_A DNAJ homolog subfamily 98.8 1.8E-09 6.2E-14 102.4 4.3 89 107-243 674-767 (780)
223 3hd5_A Thiol:disulfide interch 98.8 2.4E-08 8.3E-13 78.7 8.5 43 107-150 24-66 (195)
224 3us3_A Calsequestrin-1; calciu 98.7 7E-08 2.4E-12 83.8 11.2 88 107-242 29-123 (367)
225 3h93_A Thiol:disulfide interch 98.7 1.7E-08 5.8E-13 79.4 5.6 43 107-150 24-66 (192)
226 1eej_A Thiol:disulfide interch 98.7 4.8E-08 1.6E-12 78.6 8.2 45 101-149 79-123 (216)
227 3ga4_A Dolichyl-diphosphooligo 98.7 5E-08 1.7E-12 76.0 7.9 44 107-150 36-90 (178)
228 2djk_A PDI, protein disulfide- 98.7 3E-08 1E-12 73.5 6.1 88 107-243 22-115 (133)
229 2e7p_A Glutaredoxin; thioredox 98.6 9.7E-09 3.3E-13 74.0 2.2 38 107-150 18-55 (116)
230 2znm_A Thiol:disulfide interch 98.6 9.2E-08 3.2E-12 75.3 6.8 43 107-150 21-63 (195)
231 1a8l_A Protein disulfide oxido 98.5 4.4E-07 1.5E-11 72.8 9.6 91 105-242 19-112 (226)
232 1ttz_A Conserved hypothetical 98.5 1.1E-07 3.9E-12 65.2 4.2 33 112-150 3-35 (87)
233 1v58_A Thiol:disulfide interch 98.4 8.6E-07 3E-11 72.4 8.8 135 100-242 89-232 (241)
234 2ywm_A Glutaredoxin-like prote 98.4 5.3E-07 1.8E-11 72.6 6.9 89 107-242 20-114 (229)
235 2rem_A Disulfide oxidoreductas 98.4 6E-07 2.1E-11 70.3 6.6 43 107-150 24-66 (193)
236 2qc7_A ERP31, ERP28, endoplasm 98.3 2.2E-06 7.5E-11 70.0 8.0 89 107-241 21-117 (240)
237 1hyu_A AHPF, alkyl hydroperoxi 98.3 3.4E-06 1.2E-10 76.5 9.8 42 107-150 116-157 (521)
238 2c0g_A ERP29 homolog, windbeut 98.3 4.2E-06 1.5E-10 68.6 9.3 89 107-242 32-131 (248)
239 2fgx_A Putative thioredoxin; N 98.3 1.8E-06 6.2E-11 61.5 6.2 38 110-150 30-67 (107)
240 1t3b_A Thiol:disulfide interch 98.2 2.6E-06 8.9E-11 68.1 7.5 39 107-149 85-123 (211)
241 3hz8_A Thiol:disulfide interch 98.2 1.5E-06 5.2E-11 68.5 5.8 43 107-150 23-65 (193)
242 1z6m_A Conserved hypothetical 98.2 9.3E-06 3.2E-10 62.5 9.8 50 101-150 20-70 (175)
243 1ego_A Glutaredoxin; electron 98.2 2.2E-06 7.5E-11 57.8 5.1 37 112-150 3-39 (85)
244 2k8s_A Thioredoxin; dimer, str 98.2 1.5E-06 5E-11 58.3 3.9 36 112-150 4-39 (80)
245 1wjk_A C330018D20RIK protein; 98.1 1E-06 3.5E-11 61.9 3.0 38 108-150 15-52 (100)
246 3feu_A Putative lipoprotein; a 98.1 8.3E-07 2.8E-11 69.5 1.7 40 108-150 22-61 (185)
247 3l9v_A Putative thiol-disulfid 98.0 5.2E-06 1.8E-10 65.1 4.6 43 107-150 13-58 (189)
248 4dvc_A Thiol:disulfide interch 97.9 1.6E-05 5.6E-10 61.3 6.0 42 107-149 20-61 (184)
249 3uem_A Protein disulfide-isome 97.9 4.2E-05 1.4E-09 65.7 9.0 92 109-243 136-230 (361)
250 3kp9_A Vkorc1/thioredoxin doma 97.9 2.6E-06 9E-11 71.3 0.7 38 100-137 189-226 (291)
251 2hls_A Protein disulfide oxido 97.8 6.9E-05 2.3E-09 61.1 7.6 43 108-150 25-73 (243)
252 1un2_A DSBA, thiol-disulfide i 97.6 6.8E-06 2.3E-10 65.0 -0.3 43 107-150 112-157 (197)
253 3c7m_A Thiol:disulfide interch 97.6 0.00011 3.7E-09 57.2 6.6 43 107-150 16-59 (195)
254 3gv1_A Disulfide interchange p 97.6 0.00024 8.1E-09 53.4 7.6 37 106-148 12-48 (147)
255 3l9s_A Thiol:disulfide interch 97.5 8E-05 2.7E-09 58.4 3.7 43 107-150 20-65 (191)
256 1r7h_A NRDH-redoxin; thioredox 97.4 0.00017 5.7E-09 46.9 4.7 32 112-150 3-34 (75)
257 1kte_A Thioltransferase; redox 97.4 4.5E-05 1.6E-09 53.4 1.7 34 112-147 14-47 (105)
258 2ec4_A FAS-associated factor 1 97.4 0.0022 7.7E-08 49.6 11.3 126 85-243 29-168 (178)
259 3f4s_A Alpha-DSBA1, putative u 97.4 0.00029 9.8E-09 56.8 6.4 49 102-150 33-83 (226)
260 2lqo_A Putative glutaredoxin R 97.3 0.0017 5.9E-08 44.5 8.5 32 112-150 6-37 (92)
261 3gha_A Disulfide bond formatio 97.2 0.0029 9.9E-08 49.8 10.5 48 103-150 24-73 (202)
262 1h75_A Glutaredoxin-like prote 97.1 0.00053 1.8E-08 45.3 4.3 32 112-150 3-34 (81)
263 2cq9_A GLRX2 protein, glutared 97.1 0.0011 3.6E-08 48.5 6.3 30 114-150 31-60 (130)
264 2hze_A Glutaredoxin-1; thiored 97.1 0.00016 5.4E-09 51.7 1.5 34 110-150 19-55 (114)
265 4f9z_D Endoplasmic reticulum r 96.8 0.0098 3.4E-07 47.4 10.4 91 110-243 133-225 (227)
266 2ht9_A Glutaredoxin-2; thiored 96.8 0.0015 5.1E-08 48.8 5.0 21 113-133 52-72 (146)
267 3bci_A Disulfide bond protein 96.8 0.0038 1.3E-07 48.1 7.4 44 107-150 10-55 (186)
268 3nzn_A Glutaredoxin; structura 96.4 0.0033 1.1E-07 43.8 4.3 23 111-133 23-45 (103)
269 3ic4_A Glutaredoxin (GRX-1); s 96.2 0.012 4.1E-07 39.6 6.3 22 112-133 14-35 (92)
270 3msz_A Glutaredoxin 1; alpha-b 96.2 0.014 4.7E-07 38.8 6.3 34 111-149 5-38 (89)
271 3qmx_A Glutaredoxin A, glutare 96.0 0.0085 2.9E-07 41.5 4.5 34 110-150 16-49 (99)
272 3c1r_A Glutaredoxin-1; oxidize 95.8 0.0092 3.1E-07 42.7 4.1 35 112-150 27-62 (118)
273 2yan_A Glutaredoxin-3; oxidore 95.7 0.011 3.8E-07 41.1 4.2 33 110-150 18-55 (105)
274 1fov_A Glutaredoxin 3, GRX3; a 95.7 0.015 5.1E-07 38.0 4.7 32 112-150 3-34 (82)
275 2klx_A Glutaredoxin; thioredox 95.5 0.054 1.8E-06 36.1 7.0 22 112-133 8-29 (89)
276 3rhb_A ATGRXC5, glutaredoxin-C 95.5 0.012 4.2E-07 41.4 3.8 22 112-133 21-42 (113)
277 3kzq_A Putative uncharacterize 95.3 0.079 2.7E-06 41.4 8.5 38 111-149 4-41 (208)
278 2khp_A Glutaredoxin; thioredox 95.3 0.021 7.2E-07 38.4 4.3 32 112-150 8-39 (92)
279 1wik_A Thioredoxin-like protei 95.2 0.038 1.3E-06 38.6 5.5 35 109-150 15-53 (109)
280 3ctg_A Glutaredoxin-2; reduced 94.5 0.035 1.2E-06 40.3 4.0 21 112-132 39-60 (129)
281 2axo_A Hypothetical protein AT 94.1 0.76 2.6E-05 37.6 11.5 38 110-150 44-81 (270)
282 2ct6_A SH3 domain-binding glut 94.0 0.18 6.2E-06 35.3 6.8 38 112-150 10-47 (111)
283 2in3_A Hypothetical protein; D 94.0 0.41 1.4E-05 37.2 9.6 37 206-243 173-210 (216)
284 3us3_A Calsequestrin-1; calciu 93.8 0.14 4.7E-06 43.9 6.9 94 109-243 248-348 (367)
285 3h8q_A Thioredoxin reductase 3 93.7 0.07 2.4E-06 37.6 4.1 21 113-133 20-40 (114)
286 1sji_A Calsequestrin 2, calseq 93.5 0.39 1.3E-05 40.6 9.2 42 109-150 246-288 (350)
287 3tdg_A DSBG, putative uncharac 93.3 0.041 1.4E-06 45.3 2.6 40 107-149 146-185 (273)
288 1t1v_A SH3BGRL3, SH3 domain-bi 93.2 0.28 9.4E-06 33.0 6.4 32 112-150 4-41 (93)
289 3gmf_A Protein-disulfide isome 92.1 0.28 9.7E-06 38.4 6.0 49 101-149 8-58 (205)
290 3gn3_A Putative protein-disulf 91.7 0.14 4.8E-06 39.3 3.7 43 107-149 13-55 (182)
291 2l4c_A Endoplasmic reticulum r 91.6 1.8 6.2E-05 30.8 9.4 35 108-147 39-73 (124)
292 3l4n_A Monothiol glutaredoxin- 90.7 0.16 5.6E-06 36.6 3.0 47 112-167 16-62 (127)
293 1aba_A Glutaredoxin; electron 90.1 0.66 2.3E-05 30.5 5.5 32 112-150 2-37 (87)
294 3l78_A Regulatory protein SPX; 88.8 0.56 1.9E-05 33.3 4.5 52 112-175 2-53 (120)
295 3zyw_A Glutaredoxin-3; metal b 88.6 0.37 1.3E-05 33.7 3.4 36 107-150 14-54 (111)
296 1z3e_A Regulatory protein SPX; 88.3 0.94 3.2E-05 32.7 5.6 52 112-175 3-54 (132)
297 2h8l_A Protein disulfide-isome 88.3 4.4 0.00015 32.2 10.2 94 107-243 128-230 (252)
298 3fz4_A Putative arsenate reduc 88.2 0.82 2.8E-05 32.5 5.1 55 112-178 5-59 (120)
299 3gx8_A Monothiol glutaredoxin- 87.9 1 3.5E-05 32.0 5.4 26 108-133 15-44 (121)
300 2wci_A Glutaredoxin-4; redox-a 87.6 0.41 1.4E-05 34.9 3.2 34 110-150 36-73 (135)
301 1u6t_A SH3 domain-binding glut 86.8 2.2 7.7E-05 30.3 6.6 52 111-171 1-52 (121)
302 2wem_A Glutaredoxin-related pr 86.4 0.62 2.1E-05 33.0 3.5 23 109-132 20-47 (118)
303 3gkx_A Putative ARSC family re 85.6 0.86 3E-05 32.4 4.0 54 112-177 6-59 (120)
304 3q6o_A Sulfhydryl oxidase 1; p 85.5 2.5 8.6E-05 33.4 7.2 35 207-241 203-238 (244)
305 3ipz_A Monothiol glutaredoxin- 83.1 1.2 4.1E-05 30.8 3.8 35 108-150 17-56 (109)
306 3rdw_A Putative arsenate reduc 82.9 1.1 3.7E-05 31.9 3.5 50 112-173 7-56 (121)
307 1rw1_A Conserved hypothetical 82.4 1.1 3.6E-05 31.5 3.2 49 112-172 2-50 (114)
308 3bj5_A Protein disulfide-isome 80.9 14 0.00047 26.8 10.0 91 109-243 32-127 (147)
309 2kok_A Arsenate reductase; bru 80.8 1.4 4.9E-05 31.1 3.5 50 112-173 7-56 (120)
310 1s3c_A Arsenate reductase; ARS 79.0 1.4 4.8E-05 32.2 3.1 50 113-174 5-54 (141)
311 2g2q_A Glutaredoxin-2; thiored 76.5 2.3 7.7E-05 30.0 3.3 38 109-151 2-39 (124)
312 3ec3_A Protein disulfide-isome 75.6 7.5 0.00026 30.9 6.8 91 107-243 131-228 (250)
313 2r2j_A Thioredoxin domain-cont 73.8 8.1 0.00028 32.8 6.9 43 107-150 235-278 (382)
314 3ghf_A Septum site-determining 71.4 5.8 0.0002 28.1 4.5 56 106-178 45-100 (120)
315 1nm3_A Protein HI0572; hybrid, 70.9 3 0.0001 32.9 3.3 23 110-132 170-192 (241)
316 3f0i_A Arsenate reductase; str 69.4 2.3 8E-05 30.0 2.1 51 112-174 6-56 (119)
317 1pn0_A Phenol 2-monooxygenase; 69.0 49 0.0017 30.4 11.4 38 81-118 478-519 (665)
318 3gl5_A Putative DSBA oxidoredu 65.1 11 0.00036 29.9 5.4 42 108-149 1-43 (239)
319 2jvx_A NF-kappa-B essential mo 61.0 1.1 3.7E-05 23.2 -0.8 21 119-139 5-25 (28)
320 4f9z_D Endoplasmic reticulum r 60.8 33 0.0011 26.4 7.6 35 108-147 27-61 (227)
321 2wul_A Glutaredoxin related pr 58.7 8.6 0.00029 27.1 3.3 22 109-131 20-46 (118)
322 3gmf_A Protein-disulfide isome 57.8 11 0.00036 29.2 4.1 33 206-244 165-198 (205)
323 1xhj_A Nitrogen fixation prote 53.9 35 0.0012 22.6 5.5 34 97-131 26-59 (88)
324 2jad_A Yellow fluorescent prot 53.2 5.2 0.00018 34.1 1.6 17 112-128 263-279 (362)
325 2h8l_A Protein disulfide-isome 51.9 83 0.0028 24.5 8.7 36 108-147 24-59 (252)
326 1th5_A NIFU1; iron-sulfur clus 50.2 22 0.00075 22.7 3.9 42 97-139 23-66 (74)
327 3ihg_A RDME; flavoenzyme, anth 48.0 74 0.0025 27.9 8.5 34 81-115 419-453 (535)
328 3l7t_A SMU.1112C, putative unc 46.1 63 0.0021 21.5 7.5 16 211-226 118-133 (134)
329 4gxt_A A conserved functionall 45.3 99 0.0034 26.2 8.5 43 124-175 220-262 (385)
330 2a4h_A Selenoprotein SEP15; re 44.6 18 0.00063 25.7 3.1 32 211-242 63-96 (126)
331 2x8g_A Thioredoxin glutathione 43.5 18 0.00062 32.5 3.8 21 112-132 20-40 (598)
332 2imf_A HCCA isomerase, 2-hydro 41.8 24 0.00082 26.7 3.8 33 112-147 3-35 (203)
333 2v2f_A Penicillin binding prot 41.5 14 0.00048 18.1 1.6 15 212-226 6-20 (26)
334 5nul_A Flavodoxin; electron tr 41.2 23 0.00078 24.8 3.4 14 106-119 77-90 (138)
335 2p25_A Glyoxalase family prote 40.2 77 0.0026 20.8 7.0 15 211-225 110-124 (126)
336 3ec3_A Protein disulfide-isome 39.7 1.3E+02 0.0045 23.3 9.2 36 108-147 25-60 (250)
337 3mjh_B Early endosome antigen 39.0 4 0.00014 22.0 -0.8 19 120-138 8-26 (34)
338 3gl5_A Putative DSBA oxidoredu 36.9 31 0.0011 27.1 3.8 32 207-243 181-213 (239)
339 4g81_D Putative hexonate dehyd 35.4 47 0.0016 26.5 4.6 38 103-149 4-41 (255)
340 2a2p_A Selenoprotein M, SELM p 34.2 24 0.00081 25.3 2.3 26 211-236 57-83 (129)
341 1r4w_A Glutathione S-transfera 33.7 25 0.00086 27.2 2.7 36 110-148 6-41 (226)
342 3pe6_A Monoglyceride lipase; a 31.7 1.1E+02 0.0036 23.3 6.3 59 87-150 15-78 (303)
343 3ga8_A HTH-type transcriptiona 30.2 36 0.0012 21.7 2.6 35 105-139 23-64 (78)
344 2dkh_A 3-hydroxybenzoate hydro 29.1 1.1E+02 0.0038 27.7 6.6 50 82-131 467-521 (639)
345 3pgv_A Haloacid dehalogenase-l 28.7 1.5E+02 0.0051 23.2 6.8 41 128-177 41-81 (285)
346 3hju_A Monoglyceride lipase; a 27.9 1.3E+02 0.0046 23.7 6.4 60 86-150 32-96 (342)
347 3fmw_A Oxygenase; mithramycin, 27.0 18 0.00062 32.6 0.9 36 82-117 445-482 (570)
348 3bid_A UPF0339 protein NMB1088 25.8 1.2E+02 0.0041 18.6 5.6 32 211-242 13-45 (64)
349 3m2o_A Glyoxalase/bleomycin re 25.0 1.9E+02 0.0063 20.5 7.2 19 211-229 127-145 (164)
350 3cwf_A Alkaline phosphatase sy 24.6 37 0.0013 23.1 2.0 15 212-226 50-64 (122)
351 4ev1_A Anabena TIC22; TIC22 fo 24.3 2.7E+02 0.0093 22.2 12.8 58 86-150 12-86 (252)
352 2obb_A Hypothetical protein; s 23.5 1.1E+02 0.0039 21.9 4.5 45 129-179 28-72 (142)
353 1nrw_A Hypothetical protein, h 23.1 2.7E+02 0.0093 21.7 10.1 40 130-178 26-65 (288)
354 3hly_A Flavodoxin-like domain; 22.7 43 0.0015 24.3 2.1 9 159-167 97-105 (161)
355 3vhs_A ATPase wrnip1; zinc fin 22.2 5.2 0.00018 19.9 -2.0 10 119-128 8-17 (29)
356 4g6x_A Glyoxalase/bleomycin re 20.9 2.2E+02 0.0074 19.8 6.5 16 211-226 134-149 (155)
357 4gym_A Glyoxalase/bleomycin re 20.3 1.7E+02 0.0058 20.1 5.0 16 211-226 116-131 (149)
358 2k49_A UPF0339 protein SO_3888 20.3 2.1E+02 0.0073 19.9 5.2 32 211-242 66-98 (118)
No 1
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=232.71 Aligned_cols=161 Identities=39% Similarity=0.685 Sum_probs=142.5
Q ss_pred cccCCcccceEEEcCC-CCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 82 AATEKSLYDFTVKDID-GKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~-g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
...+..+|+|+++|++ |+.++|++++||+|||+||++||++|+ +++.|++++++|+++|++||+|++|+++.+++++.
T Consensus 29 ~~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 29 KDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred ccccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCH
Confidence 4567789999999999 999999999999999999999999999 99999999999999999999999999988888899
Q ss_pred HHHHHHHHH------hcCCCcceeeecCCCCCCchhhHHHhhhccCC---Cc------------CCccccceeEEEECCC
Q 026028 161 PEIKEFACT------RFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGG---FL------------GDLVKWNFEKFLVDKN 219 (244)
Q Consensus 161 ~~~~~~~~~------~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~P~~~lID~~ 219 (244)
+++++|+ + +++++||++.|.|.++....++|++++....+ .. ...|.|+|++||||++
T Consensus 108 ~~i~~f~-~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~ 186 (215)
T 2i3y_A 108 KEILPGL-KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPD 186 (215)
T ss_dssp HHHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTT
T ss_pred HHHHHHH-HhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCC
Confidence 9999999 6 89999999988888888778889887654321 11 1347788999999999
Q ss_pred CcEEEEcCCCCChhhHH-HHHHHHhC
Q 026028 220 GKVIERYPPTTSPFQIE-DIQKLVVA 244 (244)
Q Consensus 220 G~I~~~~~g~~~~~~l~-~i~~lL~~ 244 (244)
|+|+++|.|..++++++ .|+++|++
T Consensus 187 G~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 187 GIPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 99999999988899999 99999863
No 2
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=9e-34 Score=220.80 Aligned_cols=164 Identities=49% Similarity=0.917 Sum_probs=142.5
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
....|+++|+|+++|.+|+++++++++||++||+||++||++|+.+++.|++++++|+++|++||+|++|+++.+++++.
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 83 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAE 83 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cccCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999998777777889
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHH
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQ 239 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~ 239 (244)
+.+++|+.++++++||++.+.|.++....++|+++.....+..+..|.++|++||||++|+|++++.|..++++++ .|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 163 (169)
T 2v1m_A 84 AEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIM 163 (169)
T ss_dssp HHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHH
Confidence 9999993278899999997667777666678887766554544445778899999999999999999998999999 999
Q ss_pred HHHhC
Q 026028 240 KLVVA 244 (244)
Q Consensus 240 ~lL~~ 244 (244)
++|++
T Consensus 164 ~ll~~ 168 (169)
T 2v1m_A 164 ELLEK 168 (169)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 99864
No 3
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=100.00 E-value=1.1e-33 Score=228.84 Aligned_cols=165 Identities=37% Similarity=0.673 Sum_probs=141.8
Q ss_pred cccccCCcccceEEEcCC-CCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDID-GKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPG 158 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~-g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~ 158 (244)
.-...++.+|+|+++|++ |+.++|++++||+|||+||++|||+|+.++|.|++++++|+++|++||+|++|+++.++++
T Consensus 18 ~~~~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d 97 (208)
T 2f8a_A 18 LYFQSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENA 97 (208)
T ss_dssp ----CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCS
T ss_pred cchhhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCC
Confidence 344578899999999999 9999999999999999999999999999999999999999999999999999988778888
Q ss_pred ChHHHHHHHH-----HhcCCCcceeeecCCCCCCchhhHHHhhhccCC-------Cc------------CCccccceeEE
Q 026028 159 SNPEIKEFAC-----TRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGG-------FL------------GDLVKWNFEKF 214 (244)
Q Consensus 159 ~~~~~~~~~~-----~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~-------~~------------~~~i~~~P~~~ 214 (244)
+.+++++|++ ++++++||++.+.|.++....++|++++...++ .. ...|.|+|++|
T Consensus 98 ~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tf 177 (208)
T 2f8a_A 98 KNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKF 177 (208)
T ss_dssp CHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEE
T ss_pred CHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEE
Confidence 8999999993 289999999988888887777788887643321 11 12478889999
Q ss_pred EECCCCcEEEEcCCCCChhhHH-HHHHHHhC
Q 026028 215 LVDKNGKVIERYPPTTSPFQIE-DIQKLVVA 244 (244)
Q Consensus 215 lID~~G~I~~~~~g~~~~~~l~-~i~~lL~~ 244 (244)
|||++|+|++++.|..++++++ .|+++|++
T Consensus 178 lID~~G~i~~~~~g~~~~~~l~~~I~~ll~~ 208 (208)
T 2f8a_A 178 LVGPDGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp EECTTSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred EEcCCCcEEEEeCCCCCHHHHHHHHHHHhhC
Confidence 9999999999999999999999 99999864
No 4
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=227.80 Aligned_cols=159 Identities=41% Similarity=0.686 Sum_probs=138.6
Q ss_pred ccCCcccceEEEcCC-CCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChH
Q 026028 83 ATEKSLYDFTVKDID-GKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 83 ~~g~~~pdf~l~~~~-g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
...+.+|+|+++|++ |+.++|++++||+|||+||++||++| .+++.|++++++|+++|++||+|++|+++.+++++.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 456789999999999 99999999999999999999999999 7999999999999999999999999988888888899
Q ss_pred HHHHHHHH------hcCCCcceeeecCCCCCCchhhHHHhhhccCC---Cc------------CCccccceeEEEECCCC
Q 026028 162 EIKEFACT------RFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGG---FL------------GDLVKWNFEKFLVDKNG 220 (244)
Q Consensus 162 ~~~~~~~~------~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~P~~~lID~~G 220 (244)
++++|+ + +++++||++.|.|.++....++|+++....++ .. +..|.|+|++||||++|
T Consensus 91 ~i~~f~-~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G 169 (207)
T 2r37_A 91 EILPTL-KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDG 169 (207)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHH-HhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCC
Confidence 999999 6 89999999988888888778888887643321 11 12477889999999999
Q ss_pred cEEEEcCCCCChhhHH-HHHHHHh
Q 026028 221 KVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 221 ~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+|+++|.|..++++++ .|+++|+
T Consensus 170 ~i~~~~~g~~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 170 IPIMRWHHRTTVSNVKMDILSYMR 193 (207)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHh
Confidence 9999999988999999 9999885
No 5
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=223.40 Aligned_cols=162 Identities=47% Similarity=0.866 Sum_probs=142.7
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
....+|+++|+|+++|.+|++++|++++||++||+||++|||+|+.+++.|++++++|+++|++||+|++|+++.+++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~ 100 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGS 100 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred hhccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCC
Confidence 44668999999999999999999999999999999999999999999999999999999999999999999877777788
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccC--CCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAG--GFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE- 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~- 236 (244)
.+++++|+ ++++++||++.+.|.++....++|+++....+ +..+..+.++|++||||++|+|++++.|..++++++
T Consensus 101 ~~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 179 (185)
T 2gs3_A 101 NEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEK 179 (185)
T ss_dssp HHHHHHHH-HHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGG
T ss_pred HHHHHHHH-HHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHH
Confidence 99999999 88999999997667777766678887765443 333435778899999999999999999998899998
Q ss_pred HHHHHH
Q 026028 237 DIQKLV 242 (244)
Q Consensus 237 ~i~~lL 242 (244)
.|+++|
T Consensus 180 ~i~~lL 185 (185)
T 2gs3_A 180 DLPHYF 185 (185)
T ss_dssp GHHHHC
T ss_pred HHHHhC
Confidence 888875
No 6
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=100.00 E-value=1e-33 Score=225.20 Aligned_cols=164 Identities=49% Similarity=0.907 Sum_probs=142.3
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
+.+..++++|+|+++|++|++++|++++||+|||+||++||++|+.+++.|++++++|+++|++||+|++|+++.+++++
T Consensus 18 ~~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~ 97 (187)
T 3dwv_A 18 KKMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGN 97 (187)
T ss_dssp --CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSB
T ss_pred hhhcCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCC
Confidence 44667899999999999999999999999999999999999999999999999999999999999999999888888889
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCC-ccccceeEEEECCCCcEEEEcCCCCChhhHH-H
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGD-LVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-D 237 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~-~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~ 237 (244)
.+++++|+.++++++||++.+.|.++.....+|++++...++..+. .+.|++++||||++|+|++++.|..++++++ .
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~ 177 (187)
T 3dwv_A 98 EEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEK 177 (187)
T ss_dssp TTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHH
Confidence 9999999944779999999878888888888998887766544432 2322229999999999999999999999999 9
Q ss_pred HHHHHh
Q 026028 238 IQKLVV 243 (244)
Q Consensus 238 i~~lL~ 243 (244)
|+++|+
T Consensus 178 i~~lL~ 183 (187)
T 3dwv_A 178 LIPLLG 183 (187)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 999885
No 7
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=100.00 E-value=4e-33 Score=220.82 Aligned_cols=162 Identities=48% Similarity=0.884 Sum_probs=141.9
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
....+|+.+|+|+++|.+|+.++|++++||++||+||++||++|+.+++.|++++++|++++++||+|++|+++.+++++
T Consensus 19 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 98 (183)
T 2obi_A 19 DDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGS 98 (183)
T ss_dssp CCGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cCCcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCC
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999877777889
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccC--CCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAG--GFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE- 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~- 236 (244)
.+++++|+ ++++++||++.+.|.++....++|+++....+ +..+..|.++|++||||++|+|++++.|..++++++
T Consensus 99 ~~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 177 (183)
T 2obi_A 99 NEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEK 177 (183)
T ss_dssp HHHHHHHH-HTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHT
T ss_pred HHHHHHHH-HHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 99999999 88999999997667777766678887765443 444445778899999999999999999988888888
Q ss_pred HHHHHH
Q 026028 237 DIQKLV 242 (244)
Q Consensus 237 ~i~~lL 242 (244)
.|+++|
T Consensus 178 ~i~~lL 183 (183)
T 2obi_A 178 DLPHYF 183 (183)
T ss_dssp TSGGGC
T ss_pred HHHHhC
Confidence 777664
No 8
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=100.00 E-value=6.5e-33 Score=219.14 Aligned_cols=159 Identities=42% Similarity=0.742 Sum_probs=138.6
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.....|+++|+|+++|.+|+.++|++++||+|||+||++|||+|+.+++.|++++++|+++|++||+|++|+++.+++++
T Consensus 10 ~~~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~ 89 (180)
T 3kij_A 10 FLKPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRP 89 (180)
T ss_dssp CCCCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSC
T ss_pred hhcCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCC
Confidence 34558999999999999999999999999999999999999999999999999999999999999999999888888889
Q ss_pred hHHHHHHHHHh-cCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-H
Q 026028 160 NPEIKEFACTR-FKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-D 237 (244)
Q Consensus 160 ~~~~~~~~~~~-~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~ 237 (244)
.+++++|+ ++ ++++||++.+.|..+......|+++....++. +.|++++||||++|+|++++.|..++++++ .
T Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 164 (180)
T 3kij_A 90 SKEVESFA-RKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKE----PRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPD 164 (180)
T ss_dssp HHHHHHHH-HHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCC----CSSTTCEEEECTTSCEEEEECTTCCGGGTHHH
T ss_pred HHHHHHHH-HHhcCCCCceeeeeeccCccccHHHHHHHhcCCCC----ccccceEEEECCCCCEEEEECCCCCHHHHHHH
Confidence 99999999 66 99999999877777777777788766543321 233334999999999999999999998888 8
Q ss_pred HHHHHh
Q 026028 238 IQKLVV 243 (244)
Q Consensus 238 i~~lL~ 243 (244)
|+++|+
T Consensus 165 i~~lL~ 170 (180)
T 3kij_A 165 IAALVR 170 (180)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888775
No 9
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=100.00 E-value=1.1e-32 Score=214.84 Aligned_cols=163 Identities=63% Similarity=1.112 Sum_probs=136.5
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChH
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
..+|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++|++||+|++|.++.+++++.+
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 85 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTND 85 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHH
T ss_pred CCCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999987777778999
Q ss_pred HHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHH
Q 026028 162 EIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
.+++|+.++++++||++.+.|.++....++|+++.....+..+..+.|+|++||||++|+|++++.|..++++++ .|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (170)
T 2p5q_A 86 QITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQ 165 (170)
T ss_dssp HHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred HHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 999999437899999996667677666678876654322222223444449999999999999999999999999 9999
Q ss_pred HHhC
Q 026028 241 LVVA 244 (244)
Q Consensus 241 lL~~ 244 (244)
+|++
T Consensus 166 ll~~ 169 (170)
T 2p5q_A 166 LLEI 169 (170)
T ss_dssp HTTC
T ss_pred Hhhc
Confidence 9864
No 10
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=3.2e-32 Score=217.01 Aligned_cols=165 Identities=50% Similarity=0.929 Sum_probs=139.5
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
..+..|+++|+|+++|.+|+.++|++++||++||+||++||++|+.+++.|++++++|+++|++||+|++|+++.+++++
T Consensus 20 s~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 99 (190)
T 2vup_A 20 SHMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGN 99 (190)
T ss_dssp ----CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSC
T ss_pred ccCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCC
Confidence 44668999999999999999999999999999999999999999999999999999999999999999999887778888
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCC-ccccceeEEEECCCCcEEEEcCCCCChhhHH-H
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGD-LVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-D 237 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~-~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~ 237 (244)
.+++++|++++++++||++.+.|.++....++|+++.....+..+. .+.|+|++||||++|+|++++.|..++++++ .
T Consensus 100 ~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 179 (190)
T 2vup_A 100 EEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKK 179 (190)
T ss_dssp HHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHH
Confidence 9999999845789999999766777776667887765443333222 2445559999999999999999999999999 9
Q ss_pred HHHHHhC
Q 026028 238 IQKLVVA 244 (244)
Q Consensus 238 i~~lL~~ 244 (244)
|+++|++
T Consensus 180 i~~ll~~ 186 (190)
T 2vup_A 180 LIPLLES 186 (190)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9999863
No 11
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-32 Score=214.81 Aligned_cols=159 Identities=43% Similarity=0.804 Sum_probs=130.4
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
+.+.+|+++|+|+++|.+|++++|++++||++||+||++||++|+.+++.|++++++|+++|++||+|++|+++.+++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 100 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDS 100 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred CcCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCC
Confidence 34668999999999999999999999999999999999999999999999999999999999999999999877777788
Q ss_pred hHHHHHHHHHh-cCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-H
Q 026028 160 NPEIKEFACTR-FKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-D 237 (244)
Q Consensus 160 ~~~~~~~~~~~-~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~ 237 (244)
.+++++|+ ++ ++++||++.+.|.++.....+|++.....+ ..+.|..++||||++|+|++++.|..++++++ .
T Consensus 101 ~~~~~~~~-~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P----~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 175 (181)
T 2p31_A 101 NKEIESFA-RRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSG----KEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQ 175 (181)
T ss_dssp HHHHHHHH-HHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHS----CCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHH
T ss_pred HHHHHHHH-HhhcCCCceeEeecccCCccchhhhhhhhhcCC----CccccceeEEEEcCCCCEEEEeCCCCCHHHHHHH
Confidence 99999999 56 899999997777777666666665332111 00112128999999999999999988899998 8
Q ss_pred HHHHHh
Q 026028 238 IQKLVV 243 (244)
Q Consensus 238 i~~lL~ 243 (244)
|+++|+
T Consensus 176 i~~ll~ 181 (181)
T 2p31_A 176 ITALVR 181 (181)
T ss_dssp HHTTCC
T ss_pred HHHHhC
Confidence 888764
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-31 Score=210.03 Aligned_cols=160 Identities=53% Similarity=0.963 Sum_probs=120.3
Q ss_pred cCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHH
Q 026028 84 TEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI 163 (244)
Q Consensus 84 ~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~ 163 (244)
.|..+|+|+++|.+|+.++|++++||++||+||++||++|+ +++.|++++++|+++|++||+|++|+++.+++++.+.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred chhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 57789999999999999999999999999999999999999 99999999999999999999999987777777788889
Q ss_pred HHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCC-ccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHH
Q 026028 164 KEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGD-LVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 164 ~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~-~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
++|++++++++||++.|.|.++....+.|+++.....+..+. .|.|++++||||++|+|++++.|..++++++ .|+++
T Consensus 87 ~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 87 AQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp --------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHH
T ss_pred HHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 999745789999999877777777788888765433222211 1222239999999999999999998999999 99999
Q ss_pred HhC
Q 026028 242 VVA 244 (244)
Q Consensus 242 L~~ 244 (244)
|++
T Consensus 167 l~~ 169 (171)
T 3cmi_A 167 LKE 169 (171)
T ss_dssp HTC
T ss_pred HHh
Confidence 864
No 13
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=2e-30 Score=200.74 Aligned_cols=134 Identities=21% Similarity=0.271 Sum_probs=105.3
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
+++|+++|+|+++|.+|++++|++++||++||+|| ++|||+|..+++.|++++++|++.|+++++|+.| +.
T Consensus 4 l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~~ 75 (157)
T 4g2e_A 4 VEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------PP 75 (157)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------CH
T ss_pred CCCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------ch
Confidence 56899999999999999999999999999999999 9999999999999999999999999999999987 88
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+.+++|+ ++++++||++.|.+ ..+.+.|+..... .+..+ .....|++||||++|+|++++.+.
T Consensus 76 ~~~~~~~-~~~~~~~p~l~D~~---~~v~~~ygv~~~~-~~~~~-~~~~~p~tflID~~G~I~~~~~~~ 138 (157)
T 4g2e_A 76 FSNKAFK-EHNKLNFTILSDYN---REVVKKYNVAWEF-PALPG-YVLAKRAVFVIDKEGKVRYKWVSD 138 (157)
T ss_dssp HHHHHHH-HHTTCCSEEEECTT---SHHHHHTTCEEEC-TTSTT-CEEECEEEEEECTTSBEEEEEEES
T ss_pred hHHHHHH-HHcCCcEEEEEcCC---cHHHHHcCCcccc-ccCCC-cceeeeeEEEECCCCEEEEEEECC
Confidence 9999998 88999999995533 3456666643221 11111 122348999999999999987543
No 14
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.96 E-value=5.1e-30 Score=197.48 Aligned_cols=146 Identities=17% Similarity=0.281 Sum_probs=122.7
Q ss_pred cCCcccceEEEcC--CCCeeecCCcCCCEEEEEEecCCCCCCHHh-HHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 84 TEKSLYDFTVKDI--DGKDVPLSKFKGKVLLIVNVASRCGLTPSN-YSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 84 ~g~~~pdf~l~~~--~g~~v~L~~~~gk~vll~F~~~~C~~C~~~-~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
.|+++|+|+++++ +|+.++|++++||++||+||++||++|+.+ ++.|++++++|++++++||+|++| +...+.++.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 80 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV-FEHHEAMTP 80 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec-ccccccCCH
Confidence 5889999999995 889999999999999999999999999997 999999999999889999999987 222234688
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCC--CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-H
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGP--NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-D 237 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~--~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~ 237 (244)
+.+++|+ ++++++||++.|.+.... ...+.|+ +.++|++||||++|+|++++.|..+.++++ .
T Consensus 81 ~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 146 (158)
T 3eyt_A 81 ISLKAFL-HEYRIKFPVGVDQPGDGAMPRTMAAYQ-------------MRGTPSLLLIDKAGDLRAHHFGDVSELLLGAE 146 (158)
T ss_dssp HHHHHHH-HHTTCCSCEEEECCCSSSSCHHHHHTT-------------CCSSSEEEEECTTSEEEEEEESCCCHHHHHHH
T ss_pred HHHHHHH-HHcCCCceEEEcCccchhhHHHHHHcC-------------CCCCCEEEEECCCCCEEEEEeCCCCHHHHHHH
Confidence 9999999 889999999955432110 1233332 566799999999999999999999999999 9
Q ss_pred HHHHHhC
Q 026028 238 IQKLVVA 244 (244)
Q Consensus 238 i~~lL~~ 244 (244)
|+++|++
T Consensus 147 i~~ll~~ 153 (158)
T 3eyt_A 147 IATLLGE 153 (158)
T ss_dssp HHHHHTS
T ss_pred HHHHhcc
Confidence 9999863
No 15
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.96 E-value=2.1e-29 Score=194.26 Aligned_cols=149 Identities=12% Similarity=0.239 Sum_probs=125.2
Q ss_pred cCCcccceEEEc-CCCCeeecCCcCCCEEEEEEecCCCCCCHHh-HHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChH
Q 026028 84 TEKSLYDFTVKD-IDGKDVPLSKFKGKVLLIVNVASRCGLTPSN-YSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 84 ~g~~~pdf~l~~-~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~-~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
.|.++|+|++++ .+|+.++|++++||++||+||++||++|..+ ++.|++++++|+++|++||+|++| +...+.++.+
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~~ 83 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTPE 83 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCHH
T ss_pred CCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCHH
Confidence 689999999999 8999999999999999999999999999996 999999999999999999999986 3333346889
Q ss_pred HHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHH
Q 026028 162 EIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
.+++|+ ++++++||++.|.+........+...+ ++.++|++||||++|+|++++.|..+.++++ .|++
T Consensus 84 ~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 84 ALKVFI-DEFGIKFPVAVDMPREGQRIPSTMKKY----------RLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp HHHHHH-HHTTCCSCEEEECCCTTCSSCHHHHHT----------TCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHH-HHcCCCCcEEECCccccchhhhHHHhc----------ccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 999999 889999999966443322222233222 1566699999999999999999999999999 9999
Q ss_pred HHhC
Q 026028 241 LVVA 244 (244)
Q Consensus 241 lL~~ 244 (244)
+|++
T Consensus 153 ll~~ 156 (160)
T 3lor_A 153 LLSE 156 (160)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 9864
No 16
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.96 E-value=4.7e-31 Score=205.75 Aligned_cols=148 Identities=15% Similarity=0.231 Sum_probs=119.7
Q ss_pred ccccCCcccceEEEcCCCCeeecCCc--CCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKF--KGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~--~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
.+++|+++|+|+++|.+|++++|+++ +||++||+|| ++|||+|..+++.|++++++|+++|+++++|+.|
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d------- 76 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD------- 76 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS-------
T ss_pred cccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC-------
Confidence 35789999999999999999999998 8999999888 9999999999999999999999999999999987
Q ss_pred CChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC-----Ch
Q 026028 158 GSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT-----SP 232 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~-----~~ 232 (244)
+.+.+++|. ++++++||++.|.+ ..+.+.|+.+....++.. ....|++||||++|+|++++.+.. +.
T Consensus 77 -~~~~~~~~~-~~~~~~fp~l~D~~---~~v~~~ygv~~~~~~~~~---~~~~p~tflID~~G~I~~~~~~~~~~~~~~~ 148 (164)
T 4gqc_A 77 -SPWCLKKFK-DENRLAFNLLSDYN---REVIKLYNVYHEDLKGLK---MVAKRAVFIVKPDGTVAYKWVTDNPLNEPDY 148 (164)
T ss_dssp -CHHHHHHHH-HHTTCCSEEEECTT---SHHHHHTTCEEEEETTEE---EEECCEEEEECTTSBEEEEEECSCTTCCCCH
T ss_pred -CHHHHHHHH-HhcCcccceeecCc---hHHHHHcCCcccccccCc---CCeeeEEEEECCCCEEEEEEEeCCCCCCCCH
Confidence 889999998 88999999996533 346677775443322221 123489999999999999875432 34
Q ss_pred hhHH-HHHHHHh
Q 026028 233 FQIE-DIQKLVV 243 (244)
Q Consensus 233 ~~l~-~i~~lL~ 243 (244)
+++. .|++++.
T Consensus 149 ~eil~~l~~l~~ 160 (164)
T 4gqc_A 149 DEVVREANKIAG 160 (164)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 4555 6666653
No 17
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=4.4e-29 Score=190.94 Aligned_cols=140 Identities=21% Similarity=0.256 Sum_probs=119.1
Q ss_pred cccccCCcccceEEEcCCCCeeecC--CcCCCEEEEEEecCCCCC--CHHhHHHHHHHHHHh-hcCCeEEEEEecCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLS--KFKGKVLLIVNVASRCGL--TPSNYSELSHLYEKY-KTQGFEILAFPCNQFGG 154 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~--~~~gk~vll~F~~~~C~~--C~~~~~~l~~l~~~~-~~~~~~vi~Vs~D~~~~ 154 (244)
..+.+|+++|+|+++|.+|+.++|+ +++||++||+||++||++ |+.+++.|++++++| +++|++||+|++|
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d---- 78 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLD---- 78 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECC----
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcC----
Confidence 3467899999999999999999999 999999999999999999 999999999999999 8888999999998
Q ss_pred CCCCChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhh
Q 026028 155 QEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQ 234 (244)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~ 234 (244)
++.+.+++|+ ++++++|+++.|.........+.|+ +.++|++||||++|+|++++. +.++
T Consensus 79 ---~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~---~~~~ 138 (150)
T 3fw2_A 79 ---VDKQQWKDAI-KRDTLDWEQVCDFGGLNSEVAKQYS-------------IYKIPANILLSSDGKILAKNL---RGEE 138 (150)
T ss_dssp ---SCHHHHHHHH-HHTTCCSEEECCSCGGGCHHHHHTT-------------CCSSSEEEEECTTSBEEEESC---CHHH
T ss_pred ---CCHHHHHHHH-HHhCCCceEEEcCcccchHHHHHcC-------------CCccCeEEEECCCCEEEEccC---CHHH
Confidence 2568899998 8899999999543211122333332 556699999999999999985 5888
Q ss_pred HH-HHHHHHh
Q 026028 235 IE-DIQKLVV 243 (244)
Q Consensus 235 l~-~i~~lL~ 243 (244)
++ .|+++|+
T Consensus 139 l~~~l~~ll~ 148 (150)
T 3fw2_A 139 LKKKIENIVE 148 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 88 9999886
No 18
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.96 E-value=1.9e-28 Score=191.98 Aligned_cols=154 Identities=20% Similarity=0.338 Sum_probs=119.3
Q ss_pred ccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCC-CCHHhHHHHHHHHHHhhcCC--eEEEEEecCCCCCCCCCC
Q 026028 83 ATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCG-LTPSNYSELSHLYEKYKTQG--FEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 83 ~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~-~C~~~~~~l~~l~~~~~~~~--~~vi~Vs~D~~~~~~~~~ 159 (244)
.+|.++|+|+|+|++|++++|++++||++||+||++||+ +|+.++++|.++++++++.+ +++|+|++| ++.|+
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD----p~~Dt 82 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD----PDLDK 82 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTCC
T ss_pred CCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC----ccccc
Confidence 378899999999999999999999999999999999998 89999999999999997654 899999998 66789
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhh----ccCCCcCCccccceeEEEECCCCcEEEEcCCCC--Chh
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT--SPF 233 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~----~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~--~~~ 233 (244)
++.+++|+ ++++.+++.+... .+.....+...... .........+.|.|++||||++|+|+.+|.|.. +.+
T Consensus 83 p~~l~~y~-~~~~~~~~~~~~l--tg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~ 159 (170)
T 4hde_A 83 PENLKAFI-QKFTEDTSNWNLL--TGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYE 159 (170)
T ss_dssp HHHHHHHH-TTTCSCCTTEEEE--BCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHH
T ss_pred HHHHHHHH-HHcCCCCCCceec--CcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHH
Confidence 99999999 7888776654221 22222222222211 111222345778899999999999999987754 346
Q ss_pred hHH-HHHHHHh
Q 026028 234 QIE-DIQKLVV 243 (244)
Q Consensus 234 ~l~-~i~~lL~ 243 (244)
++. +|++||+
T Consensus 160 ~l~~~ik~Lle 170 (170)
T 4hde_A 160 DIIRDMKRLAE 170 (170)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 677 8888874
No 19
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.96 E-value=2.3e-28 Score=193.11 Aligned_cols=144 Identities=17% Similarity=0.177 Sum_probs=123.2
Q ss_pred ccccCCcccceEEEcC--CCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCe------EEEEEecCCC
Q 026028 81 TAATEKSLYDFTVKDI--DGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGF------EILAFPCNQF 152 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~--~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~------~vi~Vs~D~~ 152 (244)
....|+++|+|+++++ +|+.++|++++||++||+||++||++|+.+++.|++++++|+++|+ +||+|++|
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d-- 107 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR-- 107 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS--
T ss_pred ccccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC--
Confidence 4668999999999999 9999999999999999999999999999999999999999999989 99999998
Q ss_pred CCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCCh
Q 026028 153 GGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSP 232 (244)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~ 232 (244)
.++.+.+++|+ ++++++||++.|. .+ ...+.|+. ..+.++|++||||++|+|++++.|..+.
T Consensus 108 ----~~~~~~~~~~~-~~~~~~~~~~~d~--~~-~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~ 169 (183)
T 3lwa_A 108 ----DYSRDIAQDFV-TDNGLDYPSIYDP--PF-MTAASLGG----------VPASVIPTTIVLDKQHRPAAVFLREVTS 169 (183)
T ss_dssp ----CCCHHHHHHHH-HHTTCCSCEEECT--TC-GGGGGTTT----------CCTTCCSEEEEECTTSCEEEEECSCCCH
T ss_pred ----CCCHHHHHHHH-HHcCCCccEEECC--cc-hHHHHhcc----------CCCCCCCeEEEECCCCcEEEEEcCCCCH
Confidence 22588899998 8899999999543 32 23333321 1256669999999999999999999999
Q ss_pred hhHH-HHHHHHhC
Q 026028 233 FQIE-DIQKLVVA 244 (244)
Q Consensus 233 ~~l~-~i~~lL~~ 244 (244)
++++ .|+++|++
T Consensus 170 ~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 170 KDVLDVALPLVDE 182 (183)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999 99999874
No 20
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.96 E-value=8.4e-29 Score=191.95 Aligned_cols=143 Identities=15% Similarity=0.232 Sum_probs=114.3
Q ss_pred ccccCCcccceE--EEcCCCCeeecCCcCCCEEEEEEec-CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 81 TAATEKSLYDFT--VKDIDGKDVPLSKFKGKVLLIVNVA-SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 81 ~~~~g~~~pdf~--l~~~~g~~v~L~~~~gk~vll~F~~-~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
.+.+|+++|+|+ ++|.+|++++|++++||++||+||+ +||++|+.+++.|++++++|+++|++||+|+.|
T Consensus 6 ~l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d------- 78 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD------- 78 (163)
T ss_dssp CCCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS-------
T ss_pred ccccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC-------
Confidence 467999999999 9999999999999999999999997 999999999999999999999999999999987
Q ss_pred CChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 026028 158 GSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE 236 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~ 236 (244)
+.+.+++|+ ++++++||++.|. . ..+.+.|+....... .......+.|++||||++|+|++.+.+......++
T Consensus 79 -~~~~~~~~~-~~~~~~~~~~~d~--~-~~~~~~~~v~~~~~~-~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~ 151 (163)
T 3gkn_A 79 -SVKSHDNFC-AKQGFAFPLVSDG--D-EALCRAFDVIKEKNM-YGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHAD 151 (163)
T ss_dssp -CHHHHHHHH-HHHCCSSCEEECT--T-CHHHHHTTCEEEEEE-TTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHH
T ss_pred -CHHHHHHHH-HHhCCCceEEECC--c-HHHHHHhCCcccccc-ccccccCcceEEEEECCCCeEEEEEcCCCcccCHH
Confidence 889999999 7889999999553 2 345555553321110 00000112599999999999999996655444333
No 21
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.96 E-value=3.3e-29 Score=190.16 Aligned_cols=135 Identities=11% Similarity=0.126 Sum_probs=106.3
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
..+.+|+.+|+|++ +.+|+.++|++++||++||+||++||++|+.+++.|++++++|++++++||+|++| ++
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d-------~~ 76 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMD-------EK 76 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECC-------SC
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEcc-------CC
Confidence 34678999999999 99999999999999999999999999999999999999999999889999999998 25
Q ss_pred hHHHHHHHHHhcCCCc-ceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-H
Q 026028 160 NPEIKEFACTRFKAEF-PIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-D 237 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~-p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~ 237 (244)
.+.+++++ ++++++| +.+.|.+.....+.+.|+ +.++|++||||++|+|++++.+ .++++ .
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~~---~~~l~~~ 139 (143)
T 4fo5_A 77 ESIFTETV-KIDKLDLSTQFHEGLGKESELYKKYD-------------LRKGFKNFLINDEGVIIAANVT---PEKLTEI 139 (143)
T ss_dssp HHHHHHHH-HHHTCCGGGEEECTTGGGSHHHHHTT-------------GGGCCCEEEECTTSBEEEESCC---HHHHHHH
T ss_pred HHHHHHHH-HHhCCCCceeeecccccchHHHHHcC-------------CCCCCcEEEECCCCEEEEccCC---HHHHHHH
Confidence 77888998 7889999 777443211122333333 5666999999999999999754 56666 5
Q ss_pred HH
Q 026028 238 IQ 239 (244)
Q Consensus 238 i~ 239 (244)
|+
T Consensus 140 l~ 141 (143)
T 4fo5_A 140 LK 141 (143)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 22
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.96 E-value=1.6e-28 Score=190.45 Aligned_cols=134 Identities=14% Similarity=0.208 Sum_probs=111.7
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCCE-EEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGKV-LLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk~-vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
+.+|+++|+|+++|.+|+.+++++++||+ +||+|| ++||++|+.+++.|++++++|+++|++||+|+.| +
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~ 73 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------D 73 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------C
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------C
Confidence 45899999999999999999999999997 999999 9999999999999999999999999999999987 7
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC-ChhhHH
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT-SPFQIE 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~-~~~~l~ 236 (244)
.+.+++|+ ++++++||++.|.+ ..+.+.|+... .....|++||||++|+|++++.|.. ..+.++
T Consensus 74 ~~~~~~~~-~~~~~~~~~~~d~~---~~~~~~~~v~~---------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ 138 (161)
T 3drn_A 74 INSHKRFK-EKYKLPFILVSDPD---KKIRELYGAKG---------FILPARITFVIDKKGIIRHIYNSQMNPANHVN 138 (161)
T ss_dssp HHHHHHHH-HHTTCCSEEEECTT---SHHHHHTTCCC---------SSSCCCEEEEECTTSBEEEEEECSSCTTHHHH
T ss_pred HHHHHHHH-HHhCCCceEEECCc---HHHHHHcCCCC---------cCcccceEEEECCCCEEEEEEecCCCCCcCHH
Confidence 89999999 88999999995522 33444444211 0122599999999999999999843 333344
No 23
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.96 E-value=1.5e-28 Score=186.01 Aligned_cols=134 Identities=16% Similarity=0.156 Sum_probs=111.5
Q ss_pred ccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHH---HHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 83 ATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSH---LYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 83 ~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~---l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+|+++|+|++++.+|+.++|++++||++||+||++||++|+.+++.|.+ ++++|++++++|++|++| ++
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d-------~~ 74 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPD-------EN 74 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECS-------SC
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEec-------CC
Confidence 47999999999999999999999999999999999999999999999998 999999989999999998 37
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchh--hHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAP--VYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE- 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~--~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~- 236 (244)
.+.+++|+ ++++++||++.| ..+. ... .| ++.++|++||||++|+|+++ ..+.++++
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~d--~~~~-~~~~~~~-------------~v~~~P~~~lid~~G~i~~~---~~~~~~l~~ 134 (142)
T 3ewl_A 75 REEWATKA-VYMPQGWIVGWN--KAGD-IRTRQLY-------------DIRATPTIYLLDGRKRVILK---DTSMEQLID 134 (142)
T ss_dssp HHHHHHHH-TTSCTTCEEEEC--TTCH-HHHTTCS-------------CCCSSSEEEEECTTCBEEEC---SCCHHHHHH
T ss_pred HHHHHHHH-HHcCCCcceeeC--Cccc-hhhHHHc-------------CCCCCCeEEEECCCCCEEec---CCCHHHHHH
Confidence 78889998 889999999944 3221 111 22 26677999999999999884 35577888
Q ss_pred HHHHHHh
Q 026028 237 DIQKLVV 243 (244)
Q Consensus 237 ~i~~lL~ 243 (244)
.|+++++
T Consensus 135 ~l~~~~~ 141 (142)
T 3ewl_A 135 YLATQAG 141 (142)
T ss_dssp HHHC---
T ss_pred HHHHHcc
Confidence 7776654
No 24
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=2.3e-28 Score=198.95 Aligned_cols=147 Identities=16% Similarity=0.287 Sum_probs=124.2
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCC-EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGK-VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPG 158 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk-~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~ 158 (244)
..+.+|+++|+|+++|.+|+.++|++++|| +|||+||++||++|+.+++.|++++++|+++|++||+|++|+...++.+
T Consensus 30 ~~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred CcCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 346789999999999999999999999999 5999999999999999999999999999999999999999865555557
Q ss_pred ChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcC---------CC
Q 026028 159 SNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYP---------PT 229 (244)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~---------g~ 229 (244)
+.+.+++|+ ++++++||++.|. . ..+.+.|+ +..+|++||||++|+|+++.. +.
T Consensus 110 ~~~~~~~~~-~~~~~~~~~l~D~--~-~~~~~~~~-------------v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~ 172 (218)
T 3u5r_E 110 TLERVGAEV-KAYGYGFPYLKDA--S-QSVAKAYG-------------AACTPDFFLYDRERRLVYHGQFDDARPGNGKD 172 (218)
T ss_dssp SHHHHHHHH-HHHTCCSCEEECT--T-CHHHHHHT-------------CCEESEEEEECTTCBEEEEECSSSCCTTSCCC
T ss_pred CHHHHHHHH-HHhCCCccEEECC--c-cHHHHHcC-------------CCCCCeEEEECCCCcEEEeccccccccccccc
Confidence 999999999 8889999999542 2 33455554 556699999999999998743 23
Q ss_pred CChhhHH-HHHHHHh
Q 026028 230 TSPFQIE-DIQKLVV 243 (244)
Q Consensus 230 ~~~~~l~-~i~~lL~ 243 (244)
.+.++++ .|+++|+
T Consensus 173 ~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 173 VTGADLRAAVDAVLK 187 (218)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHc
Confidence 4467788 9988875
No 25
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.95 E-value=7e-28 Score=182.93 Aligned_cols=141 Identities=20% Similarity=0.281 Sum_probs=117.1
Q ss_pred cccccCCcccceEEEcCCCCeeecC--CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHh-hcCCeEEEEEecCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLS--KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKY-KTQGFEILAFPCNQFGGQE 156 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~--~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~-~~~~~~vi~Vs~D~~~~~~ 156 (244)
..+.+|+++|+|++++.+|+.++++ +++||++||+||++||++|+.+++.|.+++++| +++|+.+++|++|.
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~----- 77 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDI----- 77 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCS-----
T ss_pred ccccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCC-----
Confidence 3567999999999999999999999 999999999999999999999999999999999 88889999999982
Q ss_pred CCChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 026028 157 PGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE 236 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~ 236 (244)
+.+.+++++ ++++++|+++.|.........+.|+ +.++|+++|||++|+|++++. +.++++
T Consensus 78 --~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~---~~~~l~ 138 (148)
T 3fkf_A 78 --DREAWETAI-KKDTLSWDQVCDFTGLSSETAKQYA-------------ILTLPTNILLSPTGKILARDI---QGEALT 138 (148)
T ss_dssp --CHHHHHHHH-HHTTCCSEEECCSCGGGCHHHHHTT-------------CCSSSEEEEECTTSBEEEESC---CHHHHH
T ss_pred --CHHHHHHHH-HHcCCCceEEEccCCcchHHHHhcC-------------CCCcCEEEEECCCCeEEEecC---CHHHHH
Confidence 567889998 8899999999543211122333332 566799999999999999986 678888
Q ss_pred -HHHHHHhC
Q 026028 237 -DIQKLVVA 244 (244)
Q Consensus 237 -~i~~lL~~ 244 (244)
.|+++|++
T Consensus 139 ~~l~~ll~~ 147 (148)
T 3fkf_A 139 GKLKELLKT 147 (148)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHcc
Confidence 99988763
No 26
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.95 E-value=3.4e-28 Score=190.16 Aligned_cols=156 Identities=22% Similarity=0.356 Sum_probs=122.4
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCC-CCHHhHHHHHHHHHHhhcCC--eEEEEEecCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCG-LTPSNYSELSHLYEKYKTQG--FEILAFPCNQFGGQEP 157 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~-~C~~~~~~l~~l~~~~~~~~--~~vi~Vs~D~~~~~~~ 157 (244)
.+.+|+.+|+|+++|.+|+.++|++++||++||+||++||+ +|+.+++.|++++++|++++ ++||+|++| ++.
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d----~~~ 81 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD----PEN 81 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC----TTT
T ss_pred cCccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC----CCC
Confidence 35689999999999999999999999999999999999999 99999999999999999886 999999998 334
Q ss_pred CChHHHHHHHHHhcCCCc---ceeeecCCCCCCchhhHHH--hhhccC-CCcCCccccceeEEEECCCCcEEEEcCCCC-
Q 026028 158 GSNPEIKEFACTRFKAEF---PIFDKVDVNGPNTAPVYQF--LKSSAG-GFLGDLVKWNFEKFLVDKNGKVIERYPPTT- 230 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~---p~l~d~d~~~~~~~~~~~~--~~~~~~-~~~~~~i~~~P~~~lID~~G~I~~~~~g~~- 230 (244)
++.+.+++|+ ++++++| +++.|.+ ....+.|+. +..... ......+.+.|++||||++|+|++++.|..
T Consensus 82 d~~~~~~~~~-~~~~~~~~~~~~l~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~ 157 (174)
T 1xzo_A 82 DKPKQLKKFA-ANYPLSFDNWDFLTGYS---QSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVEN 157 (174)
T ss_dssp CCHHHHHHHH-TTSCCCGGGEEEEBCSC---HHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSS
T ss_pred CCHHHHHHHH-HHcCCCCcceEEEeCCC---HHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCC
Confidence 6889999999 8899999 6664322 122233331 000000 001123567799999999999999998876
Q ss_pred -ChhhHH-HHHHHHhC
Q 026028 231 -SPFQIE-DIQKLVVA 244 (244)
Q Consensus 231 -~~~~l~-~i~~lL~~ 244 (244)
+.+++. .|+++|++
T Consensus 158 ~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 158 TPYDDIISDVKSASTL 173 (174)
T ss_dssp CCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhc
Confidence 467888 99988863
No 27
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.95 E-value=4.7e-28 Score=185.19 Aligned_cols=136 Identities=23% Similarity=0.398 Sum_probs=119.5
Q ss_pred cCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHH
Q 026028 84 TEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI 163 (244)
Q Consensus 84 ~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~ 163 (244)
+|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++++.|++|++| ++.+.+
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d-------~~~~~~ 74 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG-------ESKIAV 74 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES-------CCHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CCHHHH
Confidence 6899999999999999999999999999999999999999999999999999999888999999997 367889
Q ss_pred HHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 164 KEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 164 ~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
++|+ ++++++||++.|.+ ....+.|+ +.++|++||||++|++++++.|..+.++++ .|++++
T Consensus 75 ~~~~-~~~~~~~~~~~d~~---~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 75 HNFM-KSYGVNFPVVLDTD---RQVLDAYD-------------VSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp HHHH-HHHTCCSCEEEETT---SHHHHHTT-------------CCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHH-HHcCCCceEEECCc---hHHHHhcC-------------CCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 9998 78899999995532 22333332 566799999999999999999998899999 998887
Q ss_pred h
Q 026028 243 V 243 (244)
Q Consensus 243 ~ 243 (244)
+
T Consensus 138 ~ 138 (151)
T 2f9s_A 138 P 138 (151)
T ss_dssp C
T ss_pred h
Confidence 5
No 28
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.95 E-value=4e-28 Score=186.03 Aligned_cols=138 Identities=21% Similarity=0.239 Sum_probs=115.3
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChH
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
+.+|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++|++++++|++|++| ++.+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d-------~~~~ 75 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTD-------RREE 75 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECC-------SCHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEcc-------CCHH
Confidence 458999999999999999999999999999999999999999999999999999999989999999998 3678
Q ss_pred HHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHH
Q 026028 162 EIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
.+++++ ++++++|+++.|.+.......+.|+ +..+|++||||++|+|++++. +.++++ .|++
T Consensus 76 ~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 138 (152)
T 2lrn_A 76 DWKKAI-EEDKSYWNQVLLQKDDVKDVLESYC-------------IVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEK 138 (152)
T ss_dssp HHHHHH-HHHTCCSEEEEECHHHHHHHHHHTT-------------CCSSCEEEEECTTSEEEEECC---CTTHHHHHHHH
T ss_pred HHHHHH-HHhCCCCeEEecccchhHHHHHHhC-------------CCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHH
Confidence 888998 7889999999553100011222222 556699999999999999974 467888 8888
Q ss_pred HHh
Q 026028 241 LVV 243 (244)
Q Consensus 241 lL~ 243 (244)
+++
T Consensus 139 l~~ 141 (152)
T 2lrn_A 139 FVN 141 (152)
T ss_dssp HHT
T ss_pred HHh
Confidence 875
No 29
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.95 E-value=1.2e-27 Score=185.15 Aligned_cols=145 Identities=16% Similarity=0.268 Sum_probs=123.2
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
...+|+++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++++.+++|++| ++.
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d-------~~~ 79 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVN-------EQL 79 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECS-------CCH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CCH
Confidence 4568999999999999999999999999999999999999999999999999999999989999999998 367
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHH
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQ 239 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~ 239 (244)
+.+++|+ ++++++||++.+.+ ...+.|... ...++.++|++||||++|+|++++.|..+.++++ .|+
T Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 147 (165)
T 3or5_A 80 PNVKNYM-KTQGIIYPVMMATP----ELIRAFNGY-------IDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVK 147 (165)
T ss_dssp HHHHHHH-HHHTCCSCEEECCH----HHHHHHHTT-------STTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCCceEecCH----HHHHHHhhh-------hccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHH
Confidence 8889998 78899999995421 233333211 1113566799999999999999999999999999 999
Q ss_pred HHHhC
Q 026028 240 KLVVA 244 (244)
Q Consensus 240 ~lL~~ 244 (244)
++|++
T Consensus 148 ~~l~~ 152 (165)
T 3or5_A 148 MALGA 152 (165)
T ss_dssp HHHC-
T ss_pred HHHhh
Confidence 98863
No 30
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=1.5e-27 Score=182.50 Aligned_cols=139 Identities=18% Similarity=0.300 Sum_probs=121.4
Q ss_pred ccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHH
Q 026028 83 ATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 162 (244)
Q Consensus 83 ~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~ 162 (244)
.+|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++++.|++|+.| .++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~------~~~~~~ 76 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP------IDPIES 76 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT------TSCHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC------CCCHHH
Confidence 47999999999999999999999999999999999999999999999999999999989999999976 457889
Q ss_pred HHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHH
Q 026028 163 IKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 163 ~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
+++|+ ++++++|+++.|.+ ....+.|+ +.++|++||||++|+|+.++.|..+.+++. .|+++
T Consensus 77 ~~~~~-~~~~~~~~~~~d~~---~~~~~~~~-------------i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 77 VRQYV-KDYGLPFTVMYDAD---KAVGQAFG-------------TQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp HHHHH-HHTTCCSEEEECSS---CHHHHHHT-------------CCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHH-HHcCCCceEEcCch---HHHHHHcC-------------CCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 99998 88999999985422 22333343 556699999999999999999998899999 99998
Q ss_pred HhC
Q 026028 242 VVA 244 (244)
Q Consensus 242 L~~ 244 (244)
|++
T Consensus 140 l~~ 142 (153)
T 2l5o_A 140 WRN 142 (153)
T ss_dssp HHC
T ss_pred HHh
Confidence 863
No 31
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.95 E-value=6.1e-28 Score=182.91 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=107.8
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHH---HHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSH---LYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~---l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
+..+|+++|+|++++.+|+.++|++++||++||+||++||++|+.++|.|++ ++++|++.+++||+|+.|
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d------- 76 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPD------- 76 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECS-------
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcC-------
Confidence 3568999999999999999999999999999999999999999999999999 999999999999999988
Q ss_pred CChHHHHHHHHHhcCCCcceeeecCCCCC-CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 026028 158 GSNPEIKEFACTRFKAEFPIFDKVDVNGP-NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE 236 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~l~d~d~~~~-~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~ 236 (244)
++.+.+++++ ++++.+|+.+.|. .+. ...+.| .+.++|++||||++|+|+++..+ .++++
T Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~d~--~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~---~~~l~ 137 (142)
T 3eur_A 77 EELDEWKKHR-NDFAKEWTNGYDK--ELVIKNKNLY-------------DLRAIPTLYLLDKNKTVLLKDAT---LQKVE 137 (142)
T ss_dssp SCHHHHHHHG-GGSCTTSEEEECT--TCHHHHTTCS-------------CCTTCSEEEEECTTCBEEEEEEC---HHHHH
T ss_pred CCHHHHHHHH-HhcccccccccCc--cchhhhhhhc-------------CCCcCCeEEEECCCCcEEecCCC---HHHHH
Confidence 3567888888 7889999887432 211 011222 25667999999999999998754 45554
No 32
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.95 E-value=4.3e-28 Score=191.43 Aligned_cols=143 Identities=13% Similarity=0.205 Sum_probs=112.7
Q ss_pred ccccCCc----ccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCC
Q 026028 81 TAATEKS----LYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQ 155 (244)
Q Consensus 81 ~~~~g~~----~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~ 155 (244)
.+.+|+. +|+|+++|.+|++++|++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|+.|
T Consensus 20 ~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D----- 94 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD----- 94 (179)
T ss_dssp SSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC-----
T ss_pred ccCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC-----
Confidence 3456666 99999999999999999999999999999 9999999999999999999999999999999987
Q ss_pred CCCChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhH
Q 026028 156 EPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQI 235 (244)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l 235 (244)
+.+.+++|+ ++++++||++.|.+ ..+.+.|+....... .........|++||||++|+|++.+.+......+
T Consensus 95 ---~~~~~~~~~-~~~~~~f~~l~D~~---~~~~~~~gv~~~~~~-~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~ 166 (179)
T 3ixr_A 95 ---SVKSHDSFC-AKQGFTFPLVSDSD---AILCKAFDVIKEKTM-YGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHA 166 (179)
T ss_dssp ---CHHHHHHHH-HHHTCCSCEEECTT---CHHHHHTTCEEEECC-C--CEEEECCEEEEECTTSBEEEEECSCCSTTHH
T ss_pred ---CHHHHHHHH-HHcCCceEEEECCc---hHHHHHcCCcccccc-cCcccCCcceEEEEECCCCEEEEEEcCCCCCCCH
Confidence 788999999 78899999996532 345556654322110 0001112359999999999999998665544333
Q ss_pred H
Q 026028 236 E 236 (244)
Q Consensus 236 ~ 236 (244)
+
T Consensus 167 ~ 167 (179)
T 3ixr_A 167 E 167 (179)
T ss_dssp H
T ss_pred H
Confidence 3
No 33
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.95 E-value=1.1e-27 Score=185.40 Aligned_cols=153 Identities=13% Similarity=0.199 Sum_probs=117.1
Q ss_pred cccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCC-CHHhHHHHHHHHHHhhc----CCeEEEEEecCCCCCCCCCChH
Q 026028 87 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGL-TPSNYSELSHLYEKYKT----QGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 87 ~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~-C~~~~~~l~~l~~~~~~----~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
.+|+|+++|.+|++++|++++||++||+||++||++ |+.+++.|++++++|++ .+++||+|++| ++.++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHH
Confidence 579999999999999999999999999999999998 99999999999999987 47999999998 4456789
Q ss_pred HHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhcc--CCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HH
Q 026028 162 EIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSA--GGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DI 238 (244)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~--~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i 238 (244)
.+++|+ ++++.+|+++.........+.+.|+...... .......+.|.+++||||++|+|++++.|..+++++. .|
T Consensus 78 ~~~~~~-~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 156 (164)
T 2ggt_A 78 AIANYV-KEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASI 156 (164)
T ss_dssp HHHHHH-HTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHH
T ss_pred HHHHHH-HHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHH
Confidence 999999 7899999988321000001222222110000 0000111334459999999999999999999999999 99
Q ss_pred HHHHhC
Q 026028 239 QKLVVA 244 (244)
Q Consensus 239 ~~lL~~ 244 (244)
+++|++
T Consensus 157 ~~ll~~ 162 (164)
T 2ggt_A 157 ATHMRP 162 (164)
T ss_dssp HHHHGG
T ss_pred HHHHHh
Confidence 999863
No 34
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.95 E-value=1.4e-27 Score=190.40 Aligned_cols=146 Identities=20% Similarity=0.276 Sum_probs=123.9
Q ss_pred ccccCCcccceEEE-cCCCCeeecCCcCCC-EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVK-DIDGKDVPLSKFKGK-VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPG 158 (244)
Q Consensus 81 ~~~~g~~~pdf~l~-~~~g~~v~L~~~~gk-~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~ 158 (244)
.+.+|+.+|+|+++ +.+|+.++|++++|| ++||+||++||++|+.+++.|++++++|++++++||+|++|.....+.+
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d 96 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPED 96 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccc
Confidence 35689999999999 999999999999998 5999999999999999999999999999998999999999854333346
Q ss_pred ChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEE---------cCCC
Q 026028 159 SNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIER---------YPPT 229 (244)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~---------~~g~ 229 (244)
+.+.+++|+ ++++++||++.|. + ....+.|+ +...|++||||++|+|+++ +.|.
T Consensus 97 ~~~~~~~~~-~~~~~~~~~~~d~--~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~ 159 (196)
T 2ywi_A 97 SPENMKKVA-EELGYPFPYLYDE--T-QEVAKAYD-------------AACTPDFYIFDRDLKCVYRGQLDDSRPNNGIP 159 (196)
T ss_dssp SHHHHHHHH-HHHTCCSCEEECS--S-CHHHHHHT-------------CCEESEEEEEETTCBEEEEECSSSCCTTTCCC
T ss_pred CHHHHHHHH-HHcCCCceEEECC--c-hHHHHHhC-------------CCCCCeEEEEcCCCeEEEccccCcccccccCc
Confidence 889999999 7889999999542 2 23444443 5566999999999999998 5577
Q ss_pred CChhhHH-HHHHHHh
Q 026028 230 TSPFQIE-DIQKLVV 243 (244)
Q Consensus 230 ~~~~~l~-~i~~lL~ 243 (244)
.+.++++ .|+++++
T Consensus 160 ~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 160 VTGESIRAALDALLE 174 (196)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHc
Confidence 7888899 9999885
No 35
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.95 E-value=4e-27 Score=186.30 Aligned_cols=145 Identities=21% Similarity=0.218 Sum_probs=119.3
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.....|+.+|+|+++|.+|+.++|++++||++||+||++||++|+.+++.|++++++|++.+++|++|++| .++
T Consensus 32 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d------~~~ 105 (186)
T 1jfu_A 32 TMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINID------TRD 105 (186)
T ss_dssp EECCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECC------CSC
T ss_pred ccccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECC------CCC
Confidence 45668999999999999999999999999999999999999999999999999999999888999999998 234
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCC--hhhHH
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTS--PFQIE 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~--~~~l~ 236 (244)
.+.+++|+ +++++ .||++.|. . ..+.+.|+... .+.++|++||||++|+|++++.|..+ .+++.
T Consensus 106 ~~~~~~~~-~~~~~~~~~~~~d~--~-~~~~~~~~~~~---------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~ 172 (186)
T 1jfu_A 106 PEKPKTFL-KEANLTRLGYFNDQ--K-AKVFQDLKAIG---------RALGMPTSVLVDPQGCEIATIAGPAEWASEDAL 172 (186)
T ss_dssp TTHHHHHH-HHTTCCTTCCEECT--T-CHHHHHHHTTT---------CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHH
T ss_pred HHHHHHHH-HHcCCCCCceEECC--c-chHHHHhcccc---------ccCCCCEEEEECCCCCEEEEEecCCccCHHHHH
Confidence 57888998 78888 59998542 2 23344443210 02245999999999999999988765 56788
Q ss_pred -HHHHHHh
Q 026028 237 -DIQKLVV 243 (244)
Q Consensus 237 -~i~~lL~ 243 (244)
.|+++++
T Consensus 173 ~~l~~ll~ 180 (186)
T 1jfu_A 173 KLIRAATG 180 (186)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 8988875
No 36
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.95 E-value=2.3e-27 Score=180.06 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=115.7
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
...+|+++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++|+++++|++| ++.
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~ 76 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE-------RKD 76 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC-------SSS
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec-------CCH
Confidence 3568999999999999999999999999999999999999999999999999999999999999999997 366
Q ss_pred HHHHHHHHHhcCCC-cceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HH
Q 026028 161 PEIKEFACTRFKAE-FPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DI 238 (244)
Q Consensus 161 ~~~~~~~~~~~~~~-~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i 238 (244)
+.+++|+ ++++++ |+++.|.+.. ....+.|+ +.++|+++|||++|+|++++.|..+.+++. .|
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~d~~~~-~~~~~~~~-------------i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l 141 (148)
T 3hcz_A 77 EEWLKFI-RSKKIGGWLNVRDSKNH-TDFKITYD-------------IYATPVLYVLDKNKVIIAKRIGYENLDDFLVQY 141 (148)
T ss_dssp HHHHHHH-HHHTCTTSEEEECTTCC-CCHHHHHC-------------CCSSCEEEEECTTCBEEEESCCGGGHHHHHHHH
T ss_pred HHHHHHH-HHcCCCCceEEeccccc-hhHHHhcC-------------cCCCCEEEEECCCCcEEEecCCHHHHHHHHHHH
Confidence 7899998 788888 9999543321 11444443 556699999999999999998865444444 55
Q ss_pred HHHH
Q 026028 239 QKLV 242 (244)
Q Consensus 239 ~~lL 242 (244)
.+++
T Consensus 142 ~~~l 145 (148)
T 3hcz_A 142 EKSL 145 (148)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5444
No 37
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=2.3e-27 Score=182.22 Aligned_cols=138 Identities=25% Similarity=0.339 Sum_probs=108.8
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
+....|+.+|+|+++|.+|+.++|++++||++||+||++||++|+.+++.|++++++|+++|++||+|++|. .
T Consensus 7 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~-------~ 79 (152)
T 2lrt_A 7 EDKIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG-------D 79 (152)
T ss_dssp CSSSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC-------C
T ss_pred hhhccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC-------C
Confidence 345578999999999999999999999999999999999999999999999999999999999999999982 4
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHH
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEDIQ 239 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~~i~ 239 (244)
.+.++++. . +++|+++.|.+.......+.|+ +...|++||||++|+|++++.|..+.++ .+.
T Consensus 80 ~~~~~~~~-~--~~~~~~~~d~~~~~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~e~--~~~ 141 (152)
T 2lrt_A 80 EHFWKTSA-D--NLPWVCVRDANGAYSSYISLYN-------------VTNLPSVFLVNRNNELSARGENIKDLDE--AIK 141 (152)
T ss_dssp HHHHHHHH-T--TCSSEEEECSSGGGCHHHHHHT-------------CCSCSEEEEEETTTEEEEETTTCSCHHH--HHH
T ss_pred HHHHHHHH-h--CCCceEEECCCCcchHHHHHcC-------------cccCceEEEECCCCeEEEecCCHHHHHH--HHH
Confidence 55666665 3 3788888543211111333333 4556999999999999999998654443 444
Q ss_pred HHH
Q 026028 240 KLV 242 (244)
Q Consensus 240 ~lL 242 (244)
+++
T Consensus 142 ~~~ 144 (152)
T 2lrt_A 142 KLL 144 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 38
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.95 E-value=2.4e-27 Score=188.04 Aligned_cols=145 Identities=21% Similarity=0.324 Sum_probs=120.4
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
.+.+|+.+|+|+++|.+|+.++|++++||++||+||++||++|+.+++.|++++++|+++ ++||+|++|....++.++.
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~ 84 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAP 84 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSH
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCH
Confidence 456899999999999999999999999999999999999999999999999999999988 9999999974433334688
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEc--------CCCCCh
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERY--------PPTTSP 232 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~--------~g~~~~ 232 (244)
+.+++|+ ++++++||++.|. + ..+.+.|+ +...|++||||++|+|+++. .|..+.
T Consensus 85 ~~~~~~~-~~~~~~~~~~~d~--~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~ 147 (188)
T 2cvb_A 85 EKMAAFA-EEHGIFFPYLLDE--T-QEVAKAYR-------------ALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQS 147 (188)
T ss_dssp HHHHHHH-HHHTCCSCEEECS--S-SHHHHHTT-------------CCEESEEEEECTTCBEEEEECSSSCTTCGGGCCC
T ss_pred HHHHHHH-HHhCCCceEEECC--c-chHHHHcC-------------CCCCCeEEEECCCCcEEEEEecCCccccccccCH
Confidence 9999999 7889999999542 2 22344443 55669999999999999882 223356
Q ss_pred hhHH-HHHHHHh
Q 026028 233 FQIE-DIQKLVV 243 (244)
Q Consensus 233 ~~l~-~i~~lL~ 243 (244)
++++ .|+++++
T Consensus 148 ~~l~~~i~~ll~ 159 (188)
T 2cvb_A 148 HDLEAAIEALLR 159 (188)
T ss_dssp CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 7888 9998875
No 39
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=2.3e-27 Score=181.59 Aligned_cols=136 Identities=13% Similarity=0.156 Sum_probs=111.2
Q ss_pred ccceEEEc-CCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHH
Q 026028 88 LYDFTVKD-IDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEF 166 (244)
Q Consensus 88 ~pdf~l~~-~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~ 166 (244)
+|.+.+.. .+|+.++|++++||++||+||++||++|+.+++.|++++++|++.+++|++|++| +.+++.+|
T Consensus 3 ~pa~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 3 LSADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ----CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred CCcchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 34444444 7999999999999999999999999999999999999999998889999999998 78899999
Q ss_pred HHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 167 ACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 167 ~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+ ++++++||++.+.+ .....+++.++ ..+..+|++||||++|+|++++.|..+.++++ .|+++++
T Consensus 75 ~-~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 75 L-KQTPVSYPIWRYTG---ANSRNFMKTYG--------NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp H-HHSCCSSCEEEECC---SCHHHHHHTTT--------CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred H-HHcCCCCceEecCc---cchHHHHHHhC--------CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 9 88999999996533 22233333221 12455699999999999999999999999999 9988865
No 40
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=185.10 Aligned_cols=150 Identities=13% Similarity=0.237 Sum_probs=116.6
Q ss_pred cceEEEcCCCCeeecCCcCCCEEEEEEecCCCCC-CHHhHHHHHHHHHHhhc----CCeEEEEEecCCCCCCCCCChHHH
Q 026028 89 YDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGL-TPSNYSELSHLYEKYKT----QGFEILAFPCNQFGGQEPGSNPEI 163 (244)
Q Consensus 89 pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~-C~~~~~~l~~l~~~~~~----~~~~vi~Vs~D~~~~~~~~~~~~~ 163 (244)
|+|+++|.+|+.+++++++||++||+||++||++ |+.+++.|++++++|++ .+++||+|++| ++.++.+.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d----~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD----PERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC----STTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC----CCCCCHHHH
Confidence 8999999999999999999999999999999997 99999999999999975 47999999998 345688999
Q ss_pred HHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhcc--CCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHH
Q 026028 164 KEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSA--GGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 164 ~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~--~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
++|+ ++++.+|+++.+.......+.+.|+...... ....+..+.+.|++||||++|+|++++.|..+++++. .|++
T Consensus 83 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 83 ARYV-QDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHH-HTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHH-HHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 9999 7899999988531100011222222111000 0001112556679999999999999999999999999 9999
Q ss_pred HHh
Q 026028 241 LVV 243 (244)
Q Consensus 241 lL~ 243 (244)
+|+
T Consensus 162 ll~ 164 (171)
T 2rli_A 162 HMA 164 (171)
T ss_dssp HHH
T ss_pred HHH
Confidence 885
No 41
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.95 E-value=4e-27 Score=192.00 Aligned_cols=143 Identities=18% Similarity=0.266 Sum_probs=115.0
Q ss_pred cccccCCcccceEEEcC--CC--CeeecCCc-CCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCC
Q 026028 80 ATAATEKSLYDFTVKDI--DG--KDVPLSKF-KGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFG 153 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~--~g--~~v~L~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~ 153 (244)
..+.+|+++|+|+++|. +| +.++|+++ +||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 23 ~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D--- 99 (221)
T 2c0d_A 23 KLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD--- 99 (221)
T ss_dssp ---CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS---
T ss_pred ccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC---
Confidence 34678999999999998 99 99999999 9999999999 9999999999999999999999989999999987
Q ss_pred CCCCCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEc
Q 026028 154 GQEPGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERY 226 (244)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~ 226 (244)
+.+.+++|+ +++ +++||++.|. . ..+.+.|+.. ...| ...|++||||++|+|++++
T Consensus 100 -----~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~--~-~~~~~~ygv~-~~~g-------~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 100 -----SVYSHLAWK-NMPIEKGGIGNVEFTLVSDI--N-KDISKNYNVL-YDNS-------FALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp -----CHHHHHHHH-HSCGGGTCCCSCSSEEEECT--T-SHHHHHTTCE-ETTT-------EECEEEEEECTTSBEEEEE
T ss_pred -----CHHHHHHHH-HHhhhhcCccCCceEEEECC--c-hHHHHHcCCc-ccCC-------CccceEEEECCCCeEEEEE
Confidence 788899998 666 7889999542 2 3455566543 1111 1349999999999999998
Q ss_pred CCCC----ChhhHH-HHHHHH
Q 026028 227 PPTT----SPFQIE-DIQKLV 242 (244)
Q Consensus 227 ~g~~----~~~~l~-~i~~lL 242 (244)
.|.. +.+++. .|+++.
T Consensus 163 ~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 163 VNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp EECTTCCCCHHHHHHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHHHHh
Confidence 6643 345666 776664
No 42
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.95 E-value=9.3e-27 Score=177.90 Aligned_cols=137 Identities=25% Similarity=0.338 Sum_probs=116.5
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChH
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
+.+|+++|+|++++ +|+.+++++++||++||+||++||++|+.+++.|.+++++|+++|++|++|++|. +.+
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~ 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDA-------KTG 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCS-------SHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCC-------CHH
Confidence 46899999999999 9999999999999999999999999999999999999999999999999999982 577
Q ss_pred HHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCCh--hhHH-HH
Q 026028 162 EIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSP--FQIE-DI 238 (244)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~--~~l~-~i 238 (244)
.+.+|. ++++++|+++.|. . ....+.|+ +..+|++||||++|+|++++.|.... ++++ .|
T Consensus 75 ~~~~~~-~~~~~~~~~~~d~--~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i 137 (152)
T 3gl3_A 75 DAMKFL-AQVPAEFTVAFDP--K-GQTPRLYG-------------VKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp HHHHHH-HHSCCCSEEEECT--T-CHHHHHTT-------------CCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred HHHHHH-HHcCCCCceeECC--c-chhHHHcC-------------CCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHH
Confidence 888888 8899999999542 2 22333333 55669999999999999999887644 5677 77
Q ss_pred HHHHh
Q 026028 239 QKLVV 243 (244)
Q Consensus 239 ~~lL~ 243 (244)
++++.
T Consensus 138 ~~~~~ 142 (152)
T 3gl3_A 138 LAALG 142 (152)
T ss_dssp HHHTC
T ss_pred HHHHc
Confidence 77654
No 43
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.95 E-value=9e-27 Score=184.79 Aligned_cols=142 Identities=13% Similarity=0.225 Sum_probs=116.3
Q ss_pred ccCCcccceEEEcCCCC----eeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 83 ATEKSLYDFTVKDIDGK----DVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 83 ~~g~~~pdf~l~~~~g~----~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
.+|+.+|+|++++.+|+ .++|++++||++||+|| ++||++|+.+++.|++++++|++++++||+|++|
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------- 74 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD------- 74 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC-------
Confidence 47999999999999999 99999999999999999 9999999999999999999999889999999988
Q ss_pred CChHHHHHHHHHhc----CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC---
Q 026028 158 GSNPEIKEFACTRF----KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT--- 230 (244)
Q Consensus 158 ~~~~~~~~~~~~~~----~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~--- 230 (244)
+.+.+++|+ +++ +++||++.|.+ ..+.+.|+......+ ...|++||||++|+|++++.|..
T Consensus 75 -~~~~~~~~~-~~~~~~~~~~~~~~~d~~---~~~~~~~~v~~~~~g-------~~~P~~~lid~~G~i~~~~~g~~~~~ 142 (187)
T 1we0_A 75 -THFVHKAWH-ENSPAVGSIEYIMIGDPS---QTISRQFDVLNEETG-------LADRGTFIIDPDGVIQAIEINADGIG 142 (187)
T ss_dssp -CHHHHHHHH-HSCHHHHTCCSEEEECTT---CHHHHHTTCEETTTT-------EECEEEEEECTTSBEEEEEEECTTSC
T ss_pred -CHHHHHHHH-HHhccccCCCceEEECCc---hHHHHHhCCCcCCCC-------ceeeEEEEECCCCeEEEEEecCCCCC
Confidence 678899998 676 89999995522 334444542211100 14599999999999999987764
Q ss_pred -ChhhHH-HHHHHHh
Q 026028 231 -SPFQIE-DIQKLVV 243 (244)
Q Consensus 231 -~~~~l~-~i~~lL~ 243 (244)
+.+++. .|++++.
T Consensus 143 ~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 143 RDASTLINKVKAAQY 157 (187)
T ss_dssp CCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh
Confidence 466677 7777653
No 44
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=4.9e-27 Score=179.84 Aligned_cols=138 Identities=19% Similarity=0.337 Sum_probs=116.0
Q ss_pred ccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHH
Q 026028 83 ATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 162 (244)
Q Consensus 83 ~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~ 162 (244)
.+|+++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|++.++.+++|++| .++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d------~~~~~~ 76 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSID------EGGKVA 76 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECC------TTHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcC------CcchHH
Confidence 57999999999999999999999999999999999999999999999999999999988999999998 234788
Q ss_pred HHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC--ChhhHH-HHH
Q 026028 163 IKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT--SPFQIE-DIQ 239 (244)
Q Consensus 163 ~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~--~~~~l~-~i~ 239 (244)
+++|+ ++++++|+++.|.+ ....+.|+ +...|++||||++|+|++++.|.. +.+++. .|+
T Consensus 77 ~~~~~-~~~~~~~~~~~d~~---~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~ 139 (154)
T 3kcm_A 77 VEEFF-RKTGFTLPVLLDAD---KRVGKLYG-------------TTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLN 139 (154)
T ss_dssp HHHHH-HHHCCCCCEEECTT---CHHHHHHT-------------CCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHH-HHcCCCeeEEecCc---hHHHHHhC-------------CCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHH
Confidence 88998 78899999995422 22344443 556699999999999999998876 444666 776
Q ss_pred HHHh
Q 026028 240 KLVV 243 (244)
Q Consensus 240 ~lL~ 243 (244)
++.+
T Consensus 140 ~l~~ 143 (154)
T 3kcm_A 140 NELS 143 (154)
T ss_dssp TC--
T ss_pred HHHH
Confidence 6653
No 45
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.94 E-value=4e-27 Score=185.27 Aligned_cols=138 Identities=16% Similarity=0.218 Sum_probs=117.1
Q ss_pred cccccccCCcccceEEEcCCC--CeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCC
Q 026028 78 VHATAATEKSLYDFTVKDIDG--KDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQ 155 (244)
Q Consensus 78 ~~~~~~~g~~~pdf~l~~~~g--~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~ 155 (244)
......+|+++|+|+++|.+| +.+++++++||++||+||++||++|+.+++.|++++++ |++||+|++|
T Consensus 26 ~~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~----- 96 (176)
T 3kh7_A 26 ELPSALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYK----- 96 (176)
T ss_dssp GSTTTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEES-----
T ss_pred cccccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCC-----
Confidence 345577999999999999999 88999999999999999999999999999999999886 6999999986
Q ss_pred CCCChHHHHHHHHHhcCCCcce-eeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhh
Q 026028 156 EPGSNPEIKEFACTRFKAEFPI-FDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQ 234 (244)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~-l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~ 234 (244)
++.+.+++|+ ++++++|+. +.| .+ ..+.+.|+ +..+|++||||++|+|++++.|..+.++
T Consensus 97 --d~~~~~~~~~-~~~~~~~~~~~~d--~~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~ 157 (176)
T 3kh7_A 97 --DDNAAAIKWL-NELHNPYLLSISD--AD-GTLGLDLG-------------VYGAPETYLIDKQGIIRHKIVGVVDQKV 157 (176)
T ss_dssp --CCHHHHHHHH-HHTTCCCSEEEEE--TT-CHHHHHHT-------------CCSSCEEEEECTTCBEEEEEESCCCHHH
T ss_pred --CCHHHHHHHH-HHcCCCCceEEEC--Cc-chHHHHcC-------------CCCCCeEEEECCCCeEEEEEcCCCCHHH
Confidence 4788999999 788999985 433 22 23444443 4556999999999999999999998988
Q ss_pred HH-HHHHHHh
Q 026028 235 IE-DIQKLVV 243 (244)
Q Consensus 235 l~-~i~~lL~ 243 (244)
++ .|+++|+
T Consensus 158 l~~~l~~~l~ 167 (176)
T 3kh7_A 158 WREQLAPLYQ 167 (176)
T ss_dssp HHHHTHHHHH
T ss_pred HHHHHHHHHH
Confidence 88 8887775
No 46
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.94 E-value=1e-26 Score=185.77 Aligned_cols=142 Identities=12% Similarity=0.187 Sum_probs=116.6
Q ss_pred ccccCCcccceEEEcCC-------------C--CeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEE
Q 026028 81 TAATEKSLYDFTVKDID-------------G--KDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEI 144 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~-------------g--~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~v 144 (244)
.+.+|+.+|+|++++.+ | +.++|++++||++||+|| ++||++|+.+++.|++++++|++++++|
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 46689999999999988 7 899999999999999999 9999999999999999999999889999
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHhc----CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCC
Q 026028 145 LAFPCNQFGGQEPGSNPEIKEFACTRF----KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNG 220 (244)
Q Consensus 145 i~Vs~D~~~~~~~~~~~~~~~~~~~~~----~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G 220 (244)
|+|++| +.+.+++|+ +++ +++||++.|. . ..+.+.|+.... . + .+.|++||||++|
T Consensus 83 v~Vs~d--------~~~~~~~~~-~~~~~~~~~~~~~~~d~--~-~~~~~~~~v~~~-~----g---~~~P~~~lid~~G 142 (195)
T 2bmx_A 83 LGVSID--------SEFAHFQWR-AQHNDLKTLPFPMLSDI--K-RELSQAAGVLNA-D----G---VADRVTFIVDPNN 142 (195)
T ss_dssp EEEESS--------CHHHHHHHH-HHCTTGGGCCSCEEECT--T-SHHHHHHTCBCT-T----S---SBCEEEEEECTTS
T ss_pred EEEECC--------CHHHHHHHH-HHhccccCCceeEEeCC--c-hHHHHHhCCccc-C----C---CccceEEEEcCCC
Confidence 999988 678899998 677 8899999542 2 334555542211 0 0 1459999999999
Q ss_pred cEEEEcCCCC----ChhhHH-HHHHHH
Q 026028 221 KVIERYPPTT----SPFQIE-DIQKLV 242 (244)
Q Consensus 221 ~I~~~~~g~~----~~~~l~-~i~~lL 242 (244)
+|++++.|.. +.+++. .|++++
T Consensus 143 ~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 143 EIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp BEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9999987765 456677 777765
No 47
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.94 E-value=3.4e-27 Score=187.42 Aligned_cols=141 Identities=12% Similarity=0.224 Sum_probs=114.3
Q ss_pred ccCCcccceEEEcC-CC--CeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCC
Q 026028 83 ATEKSLYDFTVKDI-DG--KDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPG 158 (244)
Q Consensus 83 ~~g~~~pdf~l~~~-~g--~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~ 158 (244)
.+|+++|+|++++. +| +.++|++++||++||+|| ++|||+|+.+++.|++++++|+++|++||+|+.|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d-------- 73 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD-------- 73 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 47999999999999 59 899999999999999999 5999999999999999999999999999999988
Q ss_pred ChHHHHHHHHHhc----CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC----
Q 026028 159 SNPEIKEFACTRF----KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT---- 230 (244)
Q Consensus 159 ~~~~~~~~~~~~~----~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~---- 230 (244)
+.+.+++|+ +++ +++||++.|. . ..+.+.|+......+ ...|++||||++|+|++++.|..
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~fp~l~D~--~-~~~~~~ygv~~~~~g-------~~~p~~~lID~~G~i~~~~~~~~~~~~ 142 (186)
T 1n8j_A 74 THFTHKAWH-SSSETIAKIKYAMIGDP--T-GALTRNFDNMREDEG-------LADRATFVVDPQGIIQAIEVTAEGIGR 142 (186)
T ss_dssp CHHHHHHHH-HHCTTGGGCCSEEEECT--T-SHHHHHTTCEETTTT-------EECEEEEEECTTSBEEEEEEECTTBCC
T ss_pred CHHHHHHHH-HHcCcccCCceeEEECC--c-hHHHHHhCCccCCCC-------ceeeEEEEECCCCeEEEEEecCCCCCC
Confidence 788899998 777 8999999552 2 335555553221111 13499999999999999987654
Q ss_pred ChhhHH-HHHHHH
Q 026028 231 SPFQIE-DIQKLV 242 (244)
Q Consensus 231 ~~~~l~-~i~~lL 242 (244)
+.+++. .|+++.
T Consensus 143 ~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 143 DASDLLRKIKAAQ 155 (186)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 355666 676654
No 48
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.94 E-value=7.4e-27 Score=182.85 Aligned_cols=154 Identities=12% Similarity=0.142 Sum_probs=116.9
Q ss_pred ccCCccc-ceEEEcCCCCeeecCCcCCCEEEEEEecCCCC-CCHHhHHHHHHHHHHhhc--CCeEEEEEecCCCCCCCCC
Q 026028 83 ATEKSLY-DFTVKDIDGKDVPLSKFKGKVLLIVNVASRCG-LTPSNYSELSHLYEKYKT--QGFEILAFPCNQFGGQEPG 158 (244)
Q Consensus 83 ~~g~~~p-df~l~~~~g~~v~L~~~~gk~vll~F~~~~C~-~C~~~~~~l~~l~~~~~~--~~~~vi~Vs~D~~~~~~~~ 158 (244)
.+|+++| +|+++|.+|++++|++++||++||+||++||+ +|..+++.|++++++|++ .+++||+|++| + .|
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d----~-~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD----P-KD 76 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC----T-TC
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC----C-CC
Confidence 4799999 99999999999999999999999999999998 599999999999999975 45999999998 3 57
Q ss_pred ChHHHHHHHHHhcCCCcceeee-cCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC-CChhhHH
Q 026028 159 SNPEIKEFACTRFKAEFPIFDK-VDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT-TSPFQIE 236 (244)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~l~d-~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~-~~~~~l~ 236 (244)
+.+.+++|+ ++++.+++.+.- ..........+.+.++-... ..+..+.+.|++||||++|+|+..+.|. .+++++.
T Consensus 77 ~~~~~~~~~-~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~ 154 (170)
T 3me7_A 77 TLEDIKRFQ-KEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFM-TAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFV 154 (170)
T ss_dssp CHHHHHHHH-HHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCE-EETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHH
T ss_pred CHHHHHHHH-HHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEe-cCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHH
Confidence 899999999 888988764210 00000112222221110000 0123467789999999999999988776 4677888
Q ss_pred -HHHHHHh
Q 026028 237 -DIQKLVV 243 (244)
Q Consensus 237 -~i~~lL~ 243 (244)
.|++++.
T Consensus 155 ~~l~~~~~ 162 (170)
T 3me7_A 155 NALRLARG 162 (170)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhhc
Confidence 8888764
No 49
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.94 E-value=9.4e-27 Score=182.13 Aligned_cols=144 Identities=14% Similarity=0.179 Sum_probs=113.6
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+.+|+++|+|+++|.+|+.+++++++||++||+|| ++||++|..+++.|++++++| ++++||+|+.| +
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d--------~ 89 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD--------L 89 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------C
Confidence 356899999999999999999999999999999999 899999999999999999999 67999999987 7
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC-----CCChh
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP-----TTSPF 233 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g-----~~~~~ 233 (244)
.+.+++|+ +++++ +||++.|. .. ..+ +.|+....... ..+ .+.|++||||++|+|++++.| ..+.+
T Consensus 90 ~~~~~~~~-~~~~~~~~~~l~D~-~~-~~~-~~~gv~~~~~~-~~g---~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~ 161 (171)
T 2yzh_A 90 PFAQKRFC-ESFNIQNVTVASDF-RY-RDM-EKYGVLIGEGA-LKG---ILARAVFIIDKEGKVAYVQLVPEITEEPNYD 161 (171)
T ss_dssp HHHHHHHH-HHTTCCSSEEEECT-TT-CGG-GGGTCBBCSST-TTT---SBCCEEEEECTTSBEEEEEECSBTTSCCCCH
T ss_pred HHHHHHHH-HHcCCCCeEEeecC-cc-CcH-HHhCCEecccc-cCC---ceeeEEEEEcCCCeEEEEEeCCCcCCCCCHH
Confidence 88899999 78899 89999551 22 334 66664321100 001 134999999999999999864 23345
Q ss_pred hHH-HHHHHH
Q 026028 234 QIE-DIQKLV 242 (244)
Q Consensus 234 ~l~-~i~~lL 242 (244)
++. .|+++|
T Consensus 162 ~ll~~l~~ll 171 (171)
T 2yzh_A 162 EVVNKVKELI 171 (171)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhC
Confidence 566 776654
No 50
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.94 E-value=6e-27 Score=180.82 Aligned_cols=132 Identities=18% Similarity=0.263 Sum_probs=109.6
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCC-EEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGK-VLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk-~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
+.+|+.+|+|+++|.+|+.++|++++|| ++||+|| ++||++|+.+++.|++++++|++++++||+|++| +
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d--------~ 80 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG--------P 80 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC--------C
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC--------C
Confidence 6689999999999999999999999998 9999998 9999999999999999999999889999999987 7
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccce--eEEEECCCCcEEEEcCCCCCh
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNF--EKFLVDKNGKVIERYPPTTSP 232 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P--~~~lID~~G~I~~~~~g~~~~ 232 (244)
.+.+++|+ ++++++||++.|.... ..+.+.|+..... ...| ++||||++|+|++++.|..+.
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~d~~~~-~~~~~~~~v~~~~---------~~~p~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 81 PPTHKIWA-TQSGFTFPLLSDFWPH-GAVSQAYGVFNEQ---------AGIANRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp HHHHHHHH-HHHTCCSCEEECTTTT-THHHHHTTCEETT---------TTEECSEEEEECTTSBEEEEEECCTTC
T ss_pred HHHHHHHH-HhcCCCceEEecCCcC-hHHHHHcCCcccc---------CCCeeeeEEEECCCCeEEEEEecCCCC
Confidence 88999999 7889999999543112 2344444421100 0337 999999999999999887644
No 51
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.94 E-value=2.8e-26 Score=175.20 Aligned_cols=139 Identities=21% Similarity=0.317 Sum_probs=116.7
Q ss_pred cccCCccc-ceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 82 AATEKSLY-DFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 82 ~~~g~~~p-df~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
+.+|+++| +|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++| +..
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~ 75 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCD-------KNK 75 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECC-------SCH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEcc-------CcH
Confidence 45899999 9999999999999999999999999999999999999999999999999888999999988 255
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHH
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQ 239 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~ 239 (244)
+.+++|+ ++++++++.+. .|. .....+.|+ +.++|+++|||++|+|++++.|..+.++++ .|+
T Consensus 76 ~~~~~~~-~~~~~~~~~~~-~d~-~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 139 (152)
T 2lja_A 76 KAWENMV-TKDQLKGIQLH-MGT-DRTFMDAYL-------------INGIPRFILLDRDGKIISANMTRPSDPKTAEKFN 139 (152)
T ss_dssp HHHHHHH-HHHTCCSEEEE-CSS-CTHHHHHTT-------------CCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHH
T ss_pred HHHHHHH-HhcCCCCceee-cCc-chhHHHHcC-------------cCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHH
Confidence 7888888 67788765442 221 122333332 556699999999999999999988888998 888
Q ss_pred HHHh
Q 026028 240 KLVV 243 (244)
Q Consensus 240 ~lL~ 243 (244)
+++.
T Consensus 140 ~~~~ 143 (152)
T 2lja_A 140 ELLG 143 (152)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8764
No 52
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.94 E-value=1.4e-26 Score=174.95 Aligned_cols=135 Identities=16% Similarity=0.265 Sum_probs=112.8
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
+...+|+.+|+|++++.+|+.+++++ +||++||+||++||++|+.+++.|++++++|++.++.+++|++| ...++
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d----~~~~~ 81 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLV----NSEQN 81 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECG----GGSSC
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEcc----CCcCC
Confidence 44668999999999999999999999 99999999999999999999999999999999778999999997 22358
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~ 236 (244)
.+.+++|+ ++++++|+++.|.+ ....+.|+ +.++|+++|||++|+|+.++.|..+.++++
T Consensus 82 ~~~~~~~~-~~~~~~~~~~~d~~---~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 141 (145)
T 3erw_A 82 QQVVEDFI-KANKLTFPIVLDSK---GELMKEYH-------------IITIPTSFLLNEKGEIEKTKIGPMTAEQLK 141 (145)
T ss_dssp HHHHHHHH-HHTTCCSCEEECSS---SHHHHHTT-------------CCEESEEEEECTTCCEEEEEESCCCHHHHH
T ss_pred HHHHHHHH-HHcCCceeEEEcCc---hhHHHhcC-------------cCccCeEEEEcCCCcEEEEEcCCcCHHHHH
Confidence 88999998 78899999995422 22333332 566799999999999999999988887776
No 53
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.94 E-value=1.3e-26 Score=185.59 Aligned_cols=140 Identities=16% Similarity=0.203 Sum_probs=114.4
Q ss_pred ccCCcccceEEEcC--CCC---eeecCCc-CCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCC
Q 026028 83 ATEKSLYDFTVKDI--DGK---DVPLSKF-KGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQ 155 (244)
Q Consensus 83 ~~g~~~pdf~l~~~--~g~---~v~L~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~ 155 (244)
.+|+++|+|+++|. +|+ .++|+++ +||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----- 76 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID----- 76 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC-----
Confidence 47999999999998 898 9999999 9999999999 9999999999999999999999989999999988
Q ss_pred CCCChHHHHHHHHHh-------cCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 156 EPGSNPEIKEFACTR-------FKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 156 ~~~~~~~~~~~~~~~-------~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
+.+.+++|+ ++ ++++||++.|.+ ..+.+.|+.... . + .+.|++||||++|+|++++.|
T Consensus 77 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~v~~~-~----g---~~~P~~~lid~~G~i~~~~~g 141 (198)
T 1zof_A 77 ---SEQVHFAWK-NTPVEKGGIGQVSFPMVADIT---KSISRDYDVLFE-E----A---IALRGAFLIDKNMKVRHAVIN 141 (198)
T ss_dssp ---CHHHHHHHH-TSCGGGTCCCCCSSCEEECTT---SHHHHHTTCEET-T----T---EECEEEEEEETTTEEEEEEEE
T ss_pred ---CHHHHHHHH-HhhhhcccccCceeEEEECCc---hHHHHHhCCccc-C----C---cccceEEEECCCCEEEEEEec
Confidence 678899998 66 789999995422 234445542210 0 0 155999999999999999877
Q ss_pred CC----ChhhHH-HHHHHH
Q 026028 229 TT----SPFQIE-DIQKLV 242 (244)
Q Consensus 229 ~~----~~~~l~-~i~~lL 242 (244)
.. +.+++. .|+++.
T Consensus 142 ~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 142 DLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp SSSCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
Confidence 55 345666 666654
No 54
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.94 E-value=7.4e-28 Score=187.72 Aligned_cols=154 Identities=21% Similarity=0.313 Sum_probs=118.6
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCC-CHHhHHHHHHHHHHhhcC---CeEEEEEecCCCCCCCC
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGL-TPSNYSELSHLYEKYKTQ---GFEILAFPCNQFGGQEP 157 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~-C~~~~~~l~~l~~~~~~~---~~~vi~Vs~D~~~~~~~ 157 (244)
...|+.+|+|+++|.+| .++|++++||++||+||++||++ |+.+++.|++++++|+++ +++||+|++| ++.
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d----~~~ 84 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD----PER 84 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC----TTT
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC----CCC
Confidence 44788999999999999 99999999999999999999997 999999999999999875 6999999998 345
Q ss_pred CChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCC--CcCCccccceeEEEECCCCcEEEEcCCCC--Chh
Q 026028 158 GSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGG--FLGDLVKWNFEKFLVDKNGKVIERYPPTT--SPF 233 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~--~~~~~i~~~P~~~lID~~G~I~~~~~g~~--~~~ 233 (244)
++.+.+++|+ ++++.+|+++.|.+.......+.|+........ .....+.+.|++|||| +|+|++++.|.. +++
T Consensus 85 d~~~~~~~~~-~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~ 162 (172)
T 2k6v_A 85 DPPEVADRYA-KAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATD 162 (172)
T ss_dssp CCHHHHHHHH-HHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHH
T ss_pred CCHHHHHHHH-HHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHH
Confidence 6789999999 788999999954220001122222211100000 0112366779999999 999999999887 777
Q ss_pred hHH-HHHHHH
Q 026028 234 QIE-DIQKLV 242 (244)
Q Consensus 234 ~l~-~i~~lL 242 (244)
++. .|+++|
T Consensus 163 ~l~~~l~~ll 172 (172)
T 2k6v_A 163 RVVADLQALL 172 (172)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHhC
Confidence 888 887764
No 55
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.94 E-value=1.1e-26 Score=188.48 Aligned_cols=142 Identities=16% Similarity=0.164 Sum_probs=116.0
Q ss_pred ccccCCcccceEEEcC--CC--CeeecCCc-CCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCC
Q 026028 81 TAATEKSLYDFTVKDI--DG--KDVPLSKF-KGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGG 154 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~--~g--~~v~L~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~ 154 (244)
.+.+|+++|+|++++. +| +.++|+++ +||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 20 ~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D---- 95 (213)
T 2i81_A 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD---- 95 (213)
T ss_dssp CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS----
T ss_pred cccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 3568999999999998 89 89999999 9999999999 9999999999999999999999889999999988
Q ss_pred CCCCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcC
Q 026028 155 QEPGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYP 227 (244)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~ 227 (244)
+.+.+++|+ +++ +++||++.|. . ..+.+.|+... .. + ..+|++||||++|+|++++.
T Consensus 96 ----~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~--~-~~~~~~ygv~~-~~----g---~~~p~~~lID~~G~i~~~~~ 159 (213)
T 2i81_A 96 ----SKYTHLAWK-KTPLAKGGIGNIKHTLLSDI--T-KSISKDYNVLF-DD----S---VSLRAFVLIDMNGIVQHLLV 159 (213)
T ss_dssp ----CHHHHHHHH-SSCGGGTCCCSCSSEEEECT--T-SHHHHHTTCEE-TT----T---EECEEEEEECTTSBEEEEEE
T ss_pred ----CHHHHHHHH-HHHHhhCCccCCCceEEECC--c-hHHHHHhCCcc-cc----C---CcccEEEEECCCCEEEEEEe
Confidence 788999998 666 7899999552 2 34555555321 00 0 14599999999999999986
Q ss_pred CCCC----hhhHH-HHHHHH
Q 026028 228 PTTS----PFQIE-DIQKLV 242 (244)
Q Consensus 228 g~~~----~~~l~-~i~~lL 242 (244)
|... .+++. .|+++.
T Consensus 160 ~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 160 NNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp ECTTCCCCHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHH
Confidence 6543 55666 776664
No 56
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.94 E-value=1.5e-26 Score=179.69 Aligned_cols=129 Identities=12% Similarity=0.125 Sum_probs=106.6
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+.+|+.+|+|+++|.+|++++|++++||++||+|| ++||++|+.+++.|++++++| ++++||+|+.| +
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d--------~ 84 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD--------L 84 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------C
Confidence 356899999999999999999999999999999999 499999999999999999999 67999999987 7
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
.+.+++|+ +++++ +||++.|. .. ..+.+.|+......+ + ..|++||||++|+|++++.|.
T Consensus 85 ~~~~~~~~-~~~~~~~~~~l~D~-~~-~~~~~~~gv~~~~~g------~-~~p~~~liD~~G~i~~~~~g~ 145 (163)
T 1psq_A 85 PFAQKRWC-GAEGLDNAIMLSDY-FD-HSFGRDYALLINEWH------L-LARAVFVLDTDNTIRYVEYVD 145 (163)
T ss_dssp HHHHHHHH-HHHTCTTSEEEECT-TT-CHHHHHHTCBCTTTC------S-BCCEEEEECTTCBEEEEEECS
T ss_pred HHHHHHHH-HhcCCCCcEEecCC-ch-hHHHHHhCCccccCC------c-eEEEEEEEcCCCeEEEEEecC
Confidence 88899998 78899 99999551 22 345555653221101 1 249999999999999998764
No 57
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.94 E-value=2e-26 Score=185.21 Aligned_cols=143 Identities=18% Similarity=0.228 Sum_probs=116.3
Q ss_pred ccccCCcccceEEEcC--CC--CeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCC
Q 026028 81 TAATEKSLYDFTVKDI--DG--KDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQ 155 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~--~g--~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~ 155 (244)
.+.+|+++|+|++++. +| +.++|++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D----- 79 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD----- 79 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-----
Confidence 3568999999999997 78 899999999999999999 9999999999999999999999989999999988
Q ss_pred CCCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 156 EPGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 156 ~~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
+.+.+++|+ +++ +++||++.|.+ ..+.+.|+......+ ...|++||||++|+|++++.|
T Consensus 80 ---~~~~~~~~~-~~~~~~~~~~~~~~p~l~D~~---~~~~~~ygv~~~~~g-------~~~P~~~lid~~G~i~~~~~g 145 (202)
T 1uul_A 80 ---SEYSHLAWT-SIERKRGGLGQMNIPILADKT---KCIMKSYGVLKEEDG-------VAYRGLFIIDPKQNLRQITVN 145 (202)
T ss_dssp ---CHHHHHHHH-HSCGGGTCCCSCSSCEEECTT---CHHHHHHTCEETTTT-------EECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHH-HHHHhhCCCCCCceeEEECCc---hHHHHHcCCccCCCC-------ceeeEEEEECCCCEEEEEEeC
Confidence 788899998 666 88999995522 345566653321111 145999999999999999876
Q ss_pred CCC----hhhHH-HHHHHH
Q 026028 229 TTS----PFQIE-DIQKLV 242 (244)
Q Consensus 229 ~~~----~~~l~-~i~~lL 242 (244)
..+ .+++. .|+++.
T Consensus 146 ~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 146 DLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp CTTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhh
Confidence 543 35666 666654
No 58
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.94 E-value=1.3e-26 Score=180.37 Aligned_cols=131 Identities=11% Similarity=0.097 Sum_probs=106.7
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+.+|+.+|+|+++|.+|+.++|++++||++||+|| ++||++|..+++.|++++++| +|++||+|+.| +
T Consensus 16 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d--------~ 85 (165)
T 1q98_A 16 FPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD--------L 85 (165)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------C
Confidence 356899999999999999999999999999999999 899999999999999999999 67999999987 7
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
.+.+++|+ +++++ +||++.|. ....+.+.|+..... +...+ .+.|++||||++|+|++++.|
T Consensus 86 ~~~~~~~~-~~~~~~~~~~l~D~--~~~~~~~~~gv~~~~-~~~~g---~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 86 PFAQARFC-GAEGIENAKTVSTF--RNHALHSQLGVDIQT-GPLAG---LTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp HHHHTTCT-TTTTCTTEEEEECT--TCTHHHHHTTCEECS-STTTT---SBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHHH-HHcCCCceEEeecc--ccchHHHHhCceecc-cccCC---ccceeEEEEcCCCEEEEEEeC
Confidence 88889998 78899 79999543 123455555532211 00011 135999999999999999865
No 59
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.94 E-value=8.6e-27 Score=180.82 Aligned_cols=142 Identities=19% Similarity=0.259 Sum_probs=119.1
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC---------
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN--------- 150 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D--------- 150 (244)
....+|+++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|+ +++|++|++|
T Consensus 9 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~ 86 (165)
T 3ha9_A 9 HSEEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALG 86 (165)
T ss_dssp HHHHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHT
T ss_pred ccccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccc
Confidence 44678999999999999999999999999999999999999999999999999999998 6999999987
Q ss_pred --CCCCCCCCChHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcC
Q 026028 151 --QFGGQEPGSNPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYP 227 (244)
Q Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~ 227 (244)
..+.++.++.+.+++|+ +++++ +|+++.| . ....+.|+ |.++|++||||++|+|++ .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d---~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~--~ 146 (165)
T 3ha9_A 87 LNKPGYPPPDTPEMFRKFI-ANYGDPSWIMVMD---D-GSLVEKFN-------------VRSIDYIVIMDKSSNVLY--A 146 (165)
T ss_dssp CCSTTSCCCCCHHHHHHHH-HHHSCTTSEEEEC---C-SHHHHHTT-------------CCSSSEEEEEETTCCEEE--E
T ss_pred cccccCCCCCCHHHHHHHH-HHcCCCCeeEEeC---h-HHHHHHhC-------------CCCceEEEEEcCCCcEEE--e
Confidence 23334446899999999 78899 9999954 2 23444443 566799999999999998 6
Q ss_pred CCC-ChhhHH-HHHHHHh
Q 026028 228 PTT-SPFQIE-DIQKLVV 243 (244)
Q Consensus 228 g~~-~~~~l~-~i~~lL~ 243 (244)
|.. +.++++ .|++++.
T Consensus 147 g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 147 GTTPSLGELESVIKSVQG 164 (165)
T ss_dssp EESCCHHHHHHHHHHC--
T ss_pred CCCCCHHHHHHHHHHHhc
Confidence 666 788888 8888764
No 60
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.94 E-value=8.3e-27 Score=180.23 Aligned_cols=133 Identities=12% Similarity=0.189 Sum_probs=109.3
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCC--EEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGK--VLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk--~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
.+.+|+.+|+|+++|.+|++++|++++|| ++||+|| ++||++|+.+++.|++++++|+++| +||+|+.|
T Consensus 6 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d------- 77 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD------- 77 (159)
T ss_dssp CCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC-------
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC-------
Confidence 45689999999999999999999999887 8999987 9999999999999999999999999 99999987
Q ss_pred CChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhh
Q 026028 158 GSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQ 234 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~ 234 (244)
+.+.+++|+ ++++++||++.| .+ ..+.+.|+.......+ ..|++||| ++|+|++++.|..+..+
T Consensus 78 -~~~~~~~~~-~~~~~~~~~l~D--~~-~~~~~~~gv~~~p~~g-------~~~~~~li-~~G~i~~~~~g~~~~~~ 141 (159)
T 2a4v_A 78 -SVTSQKKFQ-SKQNLPYHLLSD--PK-REFIGLLGAKKTPLSG-------SIRSHFIF-VDGKLKFKRVKISPEVS 141 (159)
T ss_dssp -CHHHHHHHH-HHHTCSSEEEEC--TT-CHHHHHHTCBSSSSSC-------BCCEEEEE-ETTEEEEEEESCCHHHH
T ss_pred -CHHHHHHHH-HHhCCCceEEEC--Cc-cHHHHHhCCcccccCC-------ccceEEEE-cCCEEEEEEccCCcccc
Confidence 788999999 788999999955 22 3455556532211000 12689999 99999999988765443
No 61
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=187.69 Aligned_cols=143 Identities=13% Similarity=0.145 Sum_probs=113.9
Q ss_pred ccccCCcccceEEEcC---CCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDI---DGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQE 156 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~---~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~ 156 (244)
.+.+|+++|+|++++. +|+.++|++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D------ 91 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD------ 91 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 4568999999999985 46899999999999999999 9999999999999999999999999999999988
Q ss_pred CCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 157 PGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+.+.+++|+ +++ +++||++.|. . ..+.+.|+......+ ...|++||||++|+|++++.|.
T Consensus 92 --~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~--~-~~~~~~ygv~~~~~g-------~~~p~~~lID~~G~I~~~~~g~ 158 (211)
T 2pn8_A 92 --SQFTHLAWI-NTPRRQGGLGPIRIPLLSDL--T-HQISKDYGVYLEDSG-------HTLRGLFIIDDKGILRQITLND 158 (211)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSCEEECT--T-SHHHHHTTCEETTTT-------EECEEEEEECTTSBEEEEEEEC
T ss_pred --CHHHHHHHH-HHhhhccCccCCceEEEECC--c-hHHHHHcCCcccCCC-------cccceEEEECCCCEEEEEEecC
Confidence 788899998 666 7899999553 2 345556654321111 1359999999999999998664
Q ss_pred C----ChhhHH-HHHHHH
Q 026028 230 T----SPFQIE-DIQKLV 242 (244)
Q Consensus 230 ~----~~~~l~-~i~~lL 242 (244)
. +.+++. .|+++.
T Consensus 159 ~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 159 LPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp TTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhh
Confidence 3 334555 666654
No 62
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.94 E-value=1.4e-26 Score=175.52 Aligned_cols=142 Identities=15% Similarity=0.225 Sum_probs=120.5
Q ss_pred ccCCcccceEE--EcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 83 ATEKSLYDFTV--KDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 83 ~~g~~~pdf~l--~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
.+|+++|+|++ .+.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++ +.+++|++|.. ...++.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~--~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRS--EDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCS--TTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCC--ccccCH
Confidence 47999999999 78999999999999999999999999999999999999999999887 99999998832 223378
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHH
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQ 239 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~ 239 (244)
+++++|+ ++++++||++.|. . ....+.|+ +.++|+++|||++|++++++.|..+.++++ .|+
T Consensus 79 ~~~~~~~-~~~~~~~~~~~d~--~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 141 (148)
T 2b5x_A 79 GKIKETA-AEHDITQPIFVDS--D-HALTDAFE-------------NEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVN 141 (148)
T ss_dssp HHHHHHH-HHTTCCSCEEECS--S-CHHHHHTC-------------CCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHH
T ss_pred HHHHHHH-HHcCCCcceEECC--c-hhHHHHhC-------------CCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHH
Confidence 8999998 7889999998442 2 22333332 566799999999999999999988888999 999
Q ss_pred HHHhC
Q 026028 240 KLVVA 244 (244)
Q Consensus 240 ~lL~~ 244 (244)
++|++
T Consensus 142 ~~l~~ 146 (148)
T 2b5x_A 142 RVLAE 146 (148)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 98863
No 63
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.94 E-value=1.5e-26 Score=180.25 Aligned_cols=127 Identities=17% Similarity=0.146 Sum_probs=106.0
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+.+|+++|+|+++|.+|+.++|++++||++||+|| ++||++|..+++.|++++++ +|++||+|+.| +
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d--------~ 87 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD--------L 87 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC--------C
Confidence 456899999999999999999999999999999999 78999999999999999987 67999999987 8
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
.+.+++|+ +++++ +||++.|. ....+.+.|+......+ ...|++||||++|+|++++.+
T Consensus 88 ~~~~~~~~-~~~~~~~~~~l~D~--~~~~~~~~~gv~~~~~g-------~~~p~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 88 PFAQKRWC-ASAGLDNVITLSDH--RDLSFGENYGVVMEELR-------LLARAVFVLDADNKVVYKEIV 147 (166)
T ss_dssp HHHHHHHH-HHHTCSSCEEEECT--TTCHHHHHHTCEETTTT-------EECCEEEEECTTCBEEEEEEC
T ss_pred HHHHHHHH-HHcCCCceEEccCC--chhHHHHHhCCccccCC-------ceeeEEEEECCCCeEEEEEEc
Confidence 89999999 78899 89999543 12356666764332111 124999999999999998644
No 64
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.94 E-value=1.2e-26 Score=189.34 Aligned_cols=135 Identities=13% Similarity=0.210 Sum_probs=108.8
Q ss_pred cccccCCcccceEEEcC---CCCeeecCCcCCCEEEEEEec-CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDI---DGKDVPLSKFKGKVLLIVNVA-SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQ 155 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~---~g~~v~L~~~~gk~vll~F~~-~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~ 155 (244)
..+.+|+++|+|+++++ +|++++|++++||++||+||+ +||++|+.+++.|++++++|+++|++||+|++|
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D----- 112 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD----- 112 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 45679999999999965 459999999999999999996 999999999999999999999999999999988
Q ss_pred CCCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 156 EPGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 156 ~~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
+.+...+|. +++ +++||++.|.+ ..+.+.|+......+ ..+|++||||++|+|++++.|
T Consensus 113 ---~~~~~~~~~-~~~~~~~~~~~~~~~~l~D~~---~~~~~~ygv~~~~~g-------~~~P~~~lID~~G~I~~~~~g 178 (222)
T 3ztl_A 113 ---SQYSHLAWD-NLDRKSGGLGHMKIPLLADRK---QEISKAYGVFDEEDG-------NAFRGLFIIDPNGILRQITIN 178 (222)
T ss_dssp ---CHHHHHHHH-HSCGGGTSCCSCSSCEEECSS---SHHHHHTTCBCTTTS-------SBCEEEEEECTTSEEEEEEEE
T ss_pred ---CHHHHHHHH-HHhhhhccccccceeEEeCCc---hHHHHHcCCeecCCC-------CccceEEEECCCCeEEEEEec
Confidence 778888888 555 89999996533 335555553221111 034999999999999999877
Q ss_pred CCChh
Q 026028 229 TTSPF 233 (244)
Q Consensus 229 ~~~~~ 233 (244)
..+.+
T Consensus 179 ~~~~~ 183 (222)
T 3ztl_A 179 DKPVG 183 (222)
T ss_dssp CTTBC
T ss_pred CCCCC
Confidence 65443
No 65
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.94 E-value=2.9e-26 Score=182.65 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=113.0
Q ss_pred ccCCcccceEEEcC--CC--CeeecCCc-CCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCC
Q 026028 83 ATEKSLYDFTVKDI--DG--KDVPLSKF-KGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQE 156 (244)
Q Consensus 83 ~~g~~~pdf~l~~~--~g--~~v~L~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~ 156 (244)
++|+++|+|++++. +| +.++|+++ +||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------ 74 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------ 74 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC------
Confidence 36999999999998 99 99999999 9999999999 9999999999999999999999889999999988
Q ss_pred CCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 157 PGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+.+.+++|+ +++ +++||++.|. + ..+.+.|+... .. + ...|++||||++|+|++++.|.
T Consensus 75 --~~~~~~~~~-~~~~~~~~~~~~~~~~l~D~--~-~~~~~~~gv~~-~~----g---~~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 75 --SKFTHLAWK-KTPLSQGGIGNIKHTLISDI--S-KSIARSYDVLF-NE----S---VALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSEEEECT--T-SHHHHHTTCEE-TT----T---EECCEEEEECTTSBEEEEEEGG
T ss_pred --CHHHHHHHH-HhHHhhCCccCCCcCeEECC--c-HHHHHHhCCcC-cC----C---ceeeEEEEEcCCCEEEEEEeCC
Confidence 788999998 666 7899999552 2 33555555321 00 0 1359999999999999998774
Q ss_pred CC----hhhHH-HHHHHH
Q 026028 230 TS----PFQIE-DIQKLV 242 (244)
Q Consensus 230 ~~----~~~l~-~i~~lL 242 (244)
.. .+++. .|+++.
T Consensus 141 ~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 141 LALGRSVDEILRLIDALQ 158 (192)
T ss_dssp GSSGGGHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHh
Confidence 32 34555 665554
No 66
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.94 E-value=2.4e-26 Score=184.55 Aligned_cols=159 Identities=18% Similarity=0.197 Sum_probs=116.5
Q ss_pred cccccCCcc--cceEEEcCCCCeeecCCcCCCEEEEEEecCCCCC-CHHhHHHHHHHHHHhhcC---CeEEEEEecCCCC
Q 026028 80 ATAATEKSL--YDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGL-TPSNYSELSHLYEKYKTQ---GFEILAFPCNQFG 153 (244)
Q Consensus 80 ~~~~~g~~~--pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~-C~~~~~~l~~l~~~~~~~---~~~vi~Vs~D~~~ 153 (244)
....+|+++ |+|+++|.+|+.++|++++||++||+||++||++ |+.+++.|++++++++++ +++||+|++|
T Consensus 11 ~~~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D--- 87 (200)
T 2b7k_A 11 ANRGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD--- 87 (200)
T ss_dssp -----CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC---
T ss_pred hHhccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC---
Confidence 345578885 9999999999999999999999999999999998 999999999999999853 7999999998
Q ss_pred CCCCCChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhcc---CCCcCCccccceeEEEECCCCcEEEEcCCCC
Q 026028 154 GQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSA---GGFLGDLVKWNFEKFLVDKNGKVIERYPPTT 230 (244)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~---~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~ 230 (244)
++.|+.+.+++|+ ++++.+|+.+.+.......+.+.|+...... ..-.+..+.+.|++||||++|+|++++.|..
T Consensus 88 -~~~d~~~~~~~~~-~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~ 165 (200)
T 2b7k_A 88 -PARDSPAVLKEYL-SDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNY 165 (200)
T ss_dssp -TTTCCHHHHHHHH-TTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTC
T ss_pred -CCCCCHHHHHHHH-HHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCC
Confidence 3456889999999 7889888877431100111223333210000 0000112456689999999999999999888
Q ss_pred ChhhHH-HHHHHHh
Q 026028 231 SPFQIE-DIQKLVV 243 (244)
Q Consensus 231 ~~~~l~-~i~~lL~ 243 (244)
+++++. .|+++|+
T Consensus 166 ~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 166 DEKTGVDKIVEHVK 179 (200)
T ss_dssp CTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 888877 8887774
No 67
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.94 E-value=5.9e-26 Score=184.95 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=114.2
Q ss_pred ccccCCcccceEEEc---CCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCC
Q 026028 81 TAATEKSLYDFTVKD---IDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQE 156 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~---~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~ 156 (244)
.+.+|+++|+|++++ .+|+.++|++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D------ 99 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD------ 99 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS------
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 467899999999985 568999999999999999999 9999999999999999999999989999999998
Q ss_pred CCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 157 PGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+.+.+++|+ +++ +++||++.|.+ ..+.+.|+......+ ...|++||||++|+|++++.|.
T Consensus 100 --~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~~---~~i~~~ygv~~~~~g-------~~~P~~~liD~~G~I~~~~~g~ 166 (220)
T 1zye_A 100 --SHFSHLAWI-NTPRKNGGLGHMNIALLSDLT---KQISRDYGVLLEGPG-------LALRGLFIIDPNGVIKHLSVND 166 (220)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSEEEECTT---SHHHHHTTCEETTTT-------EECEEEEEECTTSBEEEEEEEC
T ss_pred --CHHHHHHHH-HHHHHhCCCcCCceEEEECCc---HHHHHHhCCeecCCC-------cccceEEEECCCCEEEEEEecC
Confidence 778889998 665 78999995532 345555553211110 1459999999999999988765
Q ss_pred CC----hhhHH-HHHHHH
Q 026028 230 TS----PFQIE-DIQKLV 242 (244)
Q Consensus 230 ~~----~~~l~-~i~~lL 242 (244)
.+ .+++. .|++++
T Consensus 167 ~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 167 LPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp TTCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhh
Confidence 43 35666 776665
No 68
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.93 E-value=3.4e-26 Score=183.78 Aligned_cols=132 Identities=16% Similarity=0.179 Sum_probs=108.3
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+.+|+.+|+|+++|.+|+.++|++++||++||+|| ++||++|..+++.|++++++| +|++||+|+.| +
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D--------~ 120 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD--------L 120 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC--------C
Confidence 467899999999999999999999999999999999 789999999999999999999 67999999987 7
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
.+.+++|+ +++++ +||++.|. ....+.+.|+...... ...+ + +.|++||||++|+|++++.+.
T Consensus 121 ~~~~~~~~-~~~~~~~f~~l~D~--~~~~~~~~ygv~~~~~-~~~g--~-~~p~~~lID~~G~I~~~~~~~ 184 (200)
T 3zrd_A 121 PFAQSRFC-GAEGLSNVITLSTL--RGADFKQAYGVAITEG-PLAG--L-TARAVVVLDGQDNVIYSELVN 184 (200)
T ss_dssp HHHHTTCT-TTTTCTTEEEEETT--SCTHHHHHTTCEECSS-TTTT--S-BCCEEEEECTTSBEEEEEECS
T ss_pred HHHHHHHH-HHcCCCCceEEecC--chHHHHHHhCceeecc-cCCC--c-cccEEEEECCCCeEEEEEecC
Confidence 88899998 78899 99999543 1234566666432210 0011 1 459999999999999987543
No 69
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.93 E-value=1.2e-26 Score=177.84 Aligned_cols=140 Identities=18% Similarity=0.229 Sum_probs=117.8
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
.+.+|+++|+|++++.+|+.+++++++ |++||+||++||++|+.+++.|++++++| ++++++|++| +.++.
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d-----~~~~~ 74 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISRE-----PRDTR 74 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECC-----TTCCH
T ss_pred cCCCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCC-----CcccH
Confidence 467899999999999999999999999 99999999999999999999999999999 6999999985 13588
Q ss_pred HHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHH
Q 026028 161 PEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQ 239 (244)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~ 239 (244)
+.+++|+ ++++++||++.|.. .....+...+ ++...|++||||++|+|++++.|..+.++++ .|+
T Consensus 75 ~~~~~~~-~~~~~~~~~~~d~~---~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 140 (154)
T 3ia1_A 75 EVVLEYM-KTYPRFIPLLASDR---DRPHEVAARF----------KVLGQPWTFVVDREGKVVALFAGRAGREALLDALL 140 (154)
T ss_dssp HHHHHHH-TTCTTEEECBCCSS---CCHHHHHTTS----------SBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCcccccccc---cchHHHHHHh----------CCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHH
Confidence 9999998 88999999985411 1122222211 2556799999999999999999999999999 888
Q ss_pred HHHh
Q 026028 240 KLVV 243 (244)
Q Consensus 240 ~lL~ 243 (244)
++++
T Consensus 141 ~~~~ 144 (154)
T 3ia1_A 141 LAGA 144 (154)
T ss_dssp HTTC
T ss_pred hccC
Confidence 8764
No 70
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.93 E-value=6.5e-26 Score=181.40 Aligned_cols=143 Identities=21% Similarity=0.275 Sum_probs=114.3
Q ss_pred ccccCCcccceEEEcC-CC--CeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDI-DG--KDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQE 156 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~-~g--~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~ 156 (244)
.+.+|+++|+|++++. +| +.++|++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------ 77 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD------ 77 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 3568999999999998 88 999999999999999999 9999999999999999999999989999999998
Q ss_pred CCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 157 PGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+.+.+.+|+ +++ +++||++.|. . ..+.+.|+......+ ...|++||||++|+|++++.|.
T Consensus 78 --~~~~~~~~~-~~~~~~~~~~~~~~p~l~D~--~-~~~~~~~gv~~~~~~-------~~~P~~~lid~~G~i~~~~~g~ 144 (197)
T 1qmv_A 78 --SQFTHLAWI-NTPRKEGGLGPLNIPLLADV--T-RRLSEDYGVLKTDEG-------IAYRGLFIIDGKGVLRQITVND 144 (197)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSCEEECT--T-CHHHHHTTCEETTTT-------EECEEEEEECTTSBEEEEEEEC
T ss_pred --CHHHHHHHH-HHHHhhCCCCCCceEEEECC--c-HHHHHHcCCccCCCC-------ceeeEEEEECCCCcEEEEEeCC
Confidence 678888998 565 8899999542 2 334555553211110 1359999999999999998775
Q ss_pred CC----hhhHH-HHHHHH
Q 026028 230 TS----PFQIE-DIQKLV 242 (244)
Q Consensus 230 ~~----~~~l~-~i~~lL 242 (244)
.+ .+++. .|+++.
T Consensus 145 ~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 145 LPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcc
Confidence 43 34555 665543
No 71
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.93 E-value=2.6e-26 Score=190.80 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=110.1
Q ss_pred ccccccCCcccceEEEc---CCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCC
Q 026028 79 HATAATEKSLYDFTVKD---IDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGG 154 (244)
Q Consensus 79 ~~~~~~g~~~pdf~l~~---~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~ 154 (244)
...+.+|+++|+|++++ .+|++++|++++||++||+|| ++||++|..+++.|++++++|+++|++||+|++|
T Consensus 59 ~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D---- 134 (254)
T 3tjj_A 59 LSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD---- 134 (254)
T ss_dssp CCCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS----
T ss_pred ccccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC----
Confidence 34567999999999875 467899999999999999999 9999999999999999999999999999999998
Q ss_pred CCCCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcC
Q 026028 155 QEPGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYP 227 (244)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~ 227 (244)
+.+.+.+|+ +++ +++||++.|.+ ..+.+.|+......+ ...|++||||++|+|++++.
T Consensus 135 ----~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~~---~~va~~ygv~~~~~g-------~~~p~tflID~~G~I~~~~~ 199 (254)
T 3tjj_A 135 ----SQFTHLAWI-NTPRRQGGLGPIRIPLLSDLT---HQISKDYGVYLEDSG-------HTLRGLFIIDDKGILRQITL 199 (254)
T ss_dssp ----CHHHHHHHH-TSCGGGTSCCSCSSCEEECTT---SHHHHHHTCEETTTT-------EECEEEEEECTTSBEEEEEE
T ss_pred ----CHHHHHHHH-HHHHHhcCCcccccceeeCcH---HHHHHHcCCccccCC-------CccceEEEECCCCeEEEEEe
Confidence 788899998 555 78999996533 356677765432221 12499999999999999976
Q ss_pred CCC
Q 026028 228 PTT 230 (244)
Q Consensus 228 g~~ 230 (244)
+..
T Consensus 200 ~~~ 202 (254)
T 3tjj_A 200 NDL 202 (254)
T ss_dssp ECT
T ss_pred cCC
Confidence 543
No 72
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.93 E-value=1.5e-26 Score=181.67 Aligned_cols=138 Identities=17% Similarity=0.172 Sum_probs=109.2
Q ss_pred ccccccCCcccceEEE-cCCCCeeecCC-cCCCEEEEEE-ecCCCCCCH-HhHHHHHHHHHHhhcCCeEEEE-EecCCCC
Q 026028 79 HATAATEKSLYDFTVK-DIDGKDVPLSK-FKGKVLLIVN-VASRCGLTP-SNYSELSHLYEKYKTQGFEILA-FPCNQFG 153 (244)
Q Consensus 79 ~~~~~~g~~~pdf~l~-~~~g~~v~L~~-~~gk~vll~F-~~~~C~~C~-~~~~~l~~l~~~~~~~~~~vi~-Vs~D~~~ 153 (244)
.....+|+++|+|+++ +.+|++++|++ ++||++||+| |++|||+|. .+++.|++++++|+++|++||+ |+.|
T Consensus 12 ~~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D--- 88 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN--- 88 (173)
T ss_dssp -CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS---
T ss_pred CCCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC---
Confidence 3556799999999999 99999999999 5999666655 599999999 5999999999999999999997 9987
Q ss_pred CCCCCChHHHHHHHHHhcCCC--cceeeecCCCCCCchhhHHHhhhccC-CCcCCccccceeEEEECCCCcEEEEcCCCC
Q 026028 154 GQEPGSNPEIKEFACTRFKAE--FPIFDKVDVNGPNTAPVYQFLKSSAG-GFLGDLVKWNFEKFLVDKNGKVIERYPPTT 230 (244)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~--~p~l~d~d~~~~~~~~~~~~~~~~~~-~~~~~~i~~~P~~~lID~~G~I~~~~~g~~ 230 (244)
+.+.+++|+ ++++++ ||++.|.+ ..+.+.|+....... +..+ .....|++|||| +|+|++.+.+..
T Consensus 89 -----~~~~~~~f~-~~~~~~~~fp~l~D~~---~~va~~yGv~~~~~~~~~~g-~~~~~r~tfvID-dG~I~~~~v~~~ 157 (173)
T 3mng_A 89 -----DAFVTGEWG-RAHKAEGKVRLLADPT---GAFGKETDLLLDDSLVSIFG-NRRLKRFSMVVQ-DGIVKALNVEPD 157 (173)
T ss_dssp -----CHHHHHHHH-HHTTCTTTCEEEECTT---CHHHHHHTCBCCSTTHHHHS-SCCBCCEEEEEE-TTEEEEEEECTT
T ss_pred -----CHHHHHHHH-HHhCCCCceEEEECCC---hHHHHHhCCCcccccccccC-CcceEEEEEEEE-CCEEEEEEEeCC
Confidence 788999999 788888 99996533 356777775432100 0001 022349999999 999999987654
No 73
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.93 E-value=3.4e-26 Score=188.74 Aligned_cols=132 Identities=14% Similarity=0.203 Sum_probs=108.7
Q ss_pred cccccCCcccceEEEcC---CCCeeecCCcCCCEEEEEEec-CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDI---DGKDVPLSKFKGKVLLIVNVA-SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQ 155 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~---~g~~v~L~~~~gk~vll~F~~-~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~ 155 (244)
..+.+|+++|+|++++. +|++++|++++||++||+||+ +||++|+.+++.|++++++|+++|++||+|++|
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D----- 120 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD----- 120 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS-----
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 44679999999998854 456999999999999999998 999999999999999999999999999999988
Q ss_pred CCCChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 156 EPGSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 156 ~~~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
+.+.+.+|+ +++ +++||++.|.+ ..+.+.|+......+ ...|++||||++|+|++++.+
T Consensus 121 ---~~~~~~~~~-~~~~~~~~~~~~~fp~l~D~~---~~v~~~ygv~~~~~g-------~~~p~~flID~~G~I~~~~~~ 186 (240)
T 3qpm_A 121 ---SQFTHLAWI-ITPRKQGGLGPMKIPLLSDLT---HQISKDYGVYLEDQG-------HTLRGLFIIDEKGVLRQITMN 186 (240)
T ss_dssp ---CHHHHHHHH-HSCGGGTCCCSCSSCEEECTT---SHHHHHTTCEETTTT-------EECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHH-HHHHhhcCCCCCceeEEeCch---HHHHHHhCCccccCC-------CccceEEEEcCCCeEEEEEec
Confidence 788889998 554 78999996543 346666664432211 134999999999999999765
Q ss_pred CC
Q 026028 229 TT 230 (244)
Q Consensus 229 ~~ 230 (244)
..
T Consensus 187 ~~ 188 (240)
T 3qpm_A 187 DL 188 (240)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 74
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.93 E-value=7.1e-26 Score=177.97 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=109.6
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCC-CCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASR-CGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~-C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+.+|+.+|+|+++|.+|+.+++++++||++||+||++| |++|+.+++.|++++++ .+++||+|+.| +
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D--------~ 85 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD--------L 85 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS--------C
T ss_pred CCCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC--------C
Confidence 356899999999999999999999999999999999998 99999999999999998 56999999987 7
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC--CCChhhHH
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP--TTSPFQIE 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g--~~~~~~l~ 236 (244)
.+.+++|+ +++++ +||++.|.+ ..+.+.|+...... ...+ .+.|++||||++|+|++++.| ..+..+++
T Consensus 86 ~~~~~~~~-~~~~~~~~~~l~D~~---~~~~~~~gv~~~~~-~~~g---~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~ 157 (175)
T 1xvq_A 86 PFAQKRFC-GAEGTENVMPASAFR---DSFGEDYGVTIADG-PMAG---LLARAIVVIGADGNVAYTELVPEIAQEPNYE 157 (175)
T ss_dssp HHHHTTCC-------CEEEEECTT---SSHHHHTTCBBCSS-TTTT---SBCSEEEEECTTSBEEEEEECSBTTCCCCHH
T ss_pred HHHHHHHH-HHcCCCCceEeeCCH---HHHHHHhCCccccc-ccCC---cccceEEEECCCCeEEEEEECCCcCCCCCHH
Confidence 78888898 78888 899995533 34556665432110 0011 134999999999999999863 33445677
Q ss_pred -HHHHHHh
Q 026028 237 -DIQKLVV 243 (244)
Q Consensus 237 -~i~~lL~ 243 (244)
.|+++.+
T Consensus 158 ~~l~~l~~ 165 (175)
T 1xvq_A 158 AALAALGA 165 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 6666653
No 75
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.93 E-value=1.1e-25 Score=167.99 Aligned_cols=133 Identities=15% Similarity=0.199 Sum_probs=113.9
Q ss_pred CCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHH
Q 026028 85 EKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIK 164 (244)
Q Consensus 85 g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~ 164 (244)
|..+|+|++++.+|+.+++.+++||++||+||++||++|+.+++.|++++++++ ++.+++|++| ++.+.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~ 72 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGL-------DQVPAMQ 72 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCC-------CCHHHHH
Confidence 678999999999999999999999999999999999999999999999999997 6999999987 3688899
Q ss_pred HHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 165 EFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 165 ~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+|+ +++++ +||++.|. . ....+.|+ +.++|+++|||++|+++ ++.|..+.++++ .|+++|
T Consensus 73 ~~~-~~~~~~~~~~~~d~--~-~~~~~~~~-------------i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 73 EFV-NKYPVKTFTQLADT--D-GSVWANFG-------------VTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp HHH-HHTTCTTSEEEECT--T-CHHHHHTT-------------CCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred HHH-HHcCCCceEEEEcC--C-cHHHHHcC-------------CCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 998 78899 99998542 2 22333332 55669999999999999 899998899999 999887
Q ss_pred hC
Q 026028 243 VA 244 (244)
Q Consensus 243 ~~ 244 (244)
++
T Consensus 135 ~~ 136 (136)
T 1zzo_A 135 SR 136 (136)
T ss_dssp --
T ss_pred cC
Confidence 63
No 76
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.93 E-value=1.5e-26 Score=179.60 Aligned_cols=133 Identities=16% Similarity=0.126 Sum_probs=108.6
Q ss_pred cccCCcccceEEE--cCCC--CeeecCC-cCCCEEEEEEe-cCCCCCCH-HhHHHHHHHHHHhhcCCeE-EEEEecCCCC
Q 026028 82 AATEKSLYDFTVK--DIDG--KDVPLSK-FKGKVLLIVNV-ASRCGLTP-SNYSELSHLYEKYKTQGFE-ILAFPCNQFG 153 (244)
Q Consensus 82 ~~~g~~~pdf~l~--~~~g--~~v~L~~-~~gk~vll~F~-~~~C~~C~-~~~~~l~~l~~~~~~~~~~-vi~Vs~D~~~ 153 (244)
+.+|+.+|+|+++ |.+| ++++|++ ++||++||+|| ++||++|. .+++.|++++++|+++|++ ||+|+.|
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d--- 80 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN--- 80 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS---
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC---
Confidence 5689999999986 8999 9999999 89999999999 89999999 9999999999999999999 9999987
Q ss_pred CCCCCChHHHHHHHHHhcCC--CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 154 GQEPGSNPEIKEFACTRFKA--EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~--~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+.+.+++|+ +++++ +||++.|.+ ..+.+.|+...... ..|..+...|++|||| +|+|++.+.|.
T Consensus 81 -----~~~~~~~~~-~~~~~~~~~~~l~D~~---~~~~~~~gv~~~~~--~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 -----DPFVMKAWA-KSYPENKHVKFLADGS---ATYTHALGLELDLQ--EKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp -----CHHHHHHHH-HTCTTCSSEEEEECTT---SHHHHHTTCEEEET--TTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred -----CHHHHHHHH-HhcCCCCCeEEEECCC---chHHHHcCcccccc--cCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 788999999 78899 899995532 34556665432110 0011122359999999 99999998776
No 77
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2.8e-26 Score=198.69 Aligned_cols=145 Identities=18% Similarity=0.220 Sum_probs=124.0
Q ss_pred cccccCCcccceE-----EEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCC
Q 026028 80 ATAATEKSLYDFT-----VKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGG 154 (244)
Q Consensus 80 ~~~~~g~~~pdf~-----l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~ 154 (244)
..+.+|+++|+|+ +.+.+|+.++|++++||++||+||++||++|+.+++.|++++++|++++++||+|++|.+.
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~- 127 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA- 127 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG-
T ss_pred cccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc-
Confidence 3467899999999 9999999999999999999999999999999999999999999999989999999987321
Q ss_pred CCCCChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhh
Q 026028 155 QEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQ 234 (244)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~ 234 (244)
..++.+.+++|+ ++++++||++.|.+ ..+.+.|+ |.++|++||||++|+|++++.|..+.++
T Consensus 128 -~~d~~~~~~~~~-~~~~l~fpv~~D~~---~~l~~~yg-------------V~~~Pt~~lID~~G~Iv~~~~G~~~~~~ 189 (352)
T 2hyx_A 128 -FEKVPGNVAKGA-ANLGISYPIALDNN---YATWTNYR-------------NRYWPAEYLIDATGTVRHIKFGEGDYNV 189 (352)
T ss_dssp -GGGCHHHHHHHH-HHHTCCSCEEECTT---SHHHHHTT-------------CCEESEEEEECTTSBEEEEEESBCCHHH
T ss_pred -ccCCHHHHHHHH-HHcCCCccEEeCCc---HHHHHHcC-------------CCccCEEEEEeCCCeEEEEEcCCCCHHH
Confidence 235788999999 78899999985422 22333332 5667999999999999999999888999
Q ss_pred HH-HHHHHHh
Q 026028 235 IE-DIQKLVV 243 (244)
Q Consensus 235 l~-~i~~lL~ 243 (244)
++ .|+++|+
T Consensus 190 l~~~I~~lL~ 199 (352)
T 2hyx_A 190 TETLVRQLLN 199 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 99 9998875
No 78
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.7e-26 Score=184.97 Aligned_cols=126 Identities=19% Similarity=0.254 Sum_probs=108.2
Q ss_pred cccCCcccceEEE---cCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 82 AATEKSLYDFTVK---DIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 82 ~~~g~~~pdf~l~---~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
+.+|+++|||+++ |.++++++|+||+||++||+|| +.|||+|..++..|++.+++|++.|++||+||.|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D------- 95 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD------- 95 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC-------
Confidence 5699999999987 5566899999999999999999 9999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHhc-------CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEc
Q 026028 158 GSNPEIKEFACTRF-------KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERY 226 (244)
Q Consensus 158 ~~~~~~~~~~~~~~-------~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~ 226 (244)
+.+.+++|. +.. +++||++.|.+ ..+.+.|+.+....+- ..+.+||||++|+|++..
T Consensus 96 -s~~sh~aw~-~~~~~~~~~~~l~fpllsD~~---~~vak~YGv~~~~~g~-------~~R~tFiID~~G~Ir~~~ 159 (216)
T 3sbc_A 96 -SEYSLLAWT-NIPRKEGGLGPINIPLLADTN---HSLSRDYGVLIEEEGV-------ALRGLFIIDPKGVIRHIT 159 (216)
T ss_dssp -CHHHHHHHH-TSCGGGTCCCSCSSCEEECTT---SHHHHHHTCEETTTTE-------ECEEEEEECTTSBEEEEE
T ss_pred -chhhHHHHH-HHHHHhCCccCcccceEeCCC---CHHHHHcCCeeccCCc-------eeeEEEEECCCCeEEEEE
Confidence 899999998 433 58999996644 4588889877654331 128999999999999865
No 79
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.93 E-value=1.8e-26 Score=179.60 Aligned_cols=143 Identities=15% Similarity=0.136 Sum_probs=113.3
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCC-CCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASR-CGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~-C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+.+|+.+|+|+++|.+|++++|++++||++||+||++| |++|+.+++.|++++++| .+++||+|+.| +
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d--------~ 86 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD--------L 86 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS--------S
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC--------C
Confidence 456899999999999999999999999999999999999 999999999999999999 67999999987 6
Q ss_pred hHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC-----Chh
Q 026028 160 NPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT-----SPF 233 (244)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~-----~~~ 233 (244)
.+.+++|+ +++++ +||++.|. .. ..+.+.|+......+ + ..|++||||++|+|++++.|.. +.+
T Consensus 87 ~~~~~~~~-~~~~~~~~~~~~d~-~~-~~~~~~~~v~~~~~g------~-~~p~~~lid~~G~i~~~~~g~~~~~~~~~~ 156 (167)
T 2jsy_A 87 PFAQARWC-GANGIDKVETLSDH-RD-MSFGEAFGVYIKELR------L-LARSVFVLDENGKVVYAEYVSEATNHPNYE 156 (167)
T ss_dssp GGGTSCCG-GGSSCTTEEEEEGG-GT-CHHHHHTTCBBTTTC------S-BCCEEEEECTTSCEEEEEECSBTTSCCCSH
T ss_pred HHHHHHHH-HhcCCCCceEeeCC-ch-hHHHHHhCCccccCC------c-eeeEEEEEcCCCcEEEEEecCCcCCCCCHH
Confidence 67788888 78899 89999652 12 234444542211100 0 1499999999999999986532 235
Q ss_pred hHH-HHHHHHh
Q 026028 234 QIE-DIQKLVV 243 (244)
Q Consensus 234 ~l~-~i~~lL~ 243 (244)
++. .|+++++
T Consensus 157 ~l~~~l~~llk 167 (167)
T 2jsy_A 157 KPIEAAKALVK 167 (167)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 666 8887763
No 80
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.93 E-value=7e-26 Score=174.65 Aligned_cols=134 Identities=16% Similarity=0.263 Sum_probs=111.8
Q ss_pred cccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
..+.+|+.+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|++.++.+++|+.| .
T Consensus 13 ~~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d--------~ 84 (158)
T 3hdc_A 13 PLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVE--------K 84 (158)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECS--------S
T ss_pred cccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCC--------H
Confidence 44678999999999999999999999999999999999999999999999999999999888999999987 2
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHH
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEDIQ 239 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~~i~ 239 (244)
++.+|. ++++++|+++.|.+ ..+.+.|+ +...|++||||++|+|++++.|..+.++.+.++
T Consensus 85 --~~~~~~-~~~~~~~~~~~d~~---~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~ 145 (158)
T 3hdc_A 85 --RFPEKY-RRAPVSFNFLSDAT---GQVQQRYG-------------ANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVS 145 (158)
T ss_dssp --SCCGGG-GGCCCSCEEEECTT---SHHHHHTT-------------CCSSSEEEEECTTSBEEEEEESCCCTTSHHHHH
T ss_pred --HHHHHH-HHcCCCceEEECch---HHHHHHhC-------------CCCcceEEEEcCCCCEEEEEeCCCccchHHHHH
Confidence 456677 78899999995432 22333343 556699999999999999999988665444333
Q ss_pred H
Q 026028 240 K 240 (244)
Q Consensus 240 ~ 240 (244)
+
T Consensus 146 ~ 146 (158)
T 3hdc_A 146 Y 146 (158)
T ss_dssp H
T ss_pred H
Confidence 3
No 81
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.93 E-value=6.4e-26 Score=183.11 Aligned_cols=128 Identities=20% Similarity=0.234 Sum_probs=109.6
Q ss_pred ccccCCcccceE----EEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCC
Q 026028 81 TAATEKSLYDFT----VKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQ 155 (244)
Q Consensus 81 ~~~~g~~~pdf~----l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~ 155 (244)
.+.+|+++|||+ ++|.+|++++|+||+||++||+|| +.|||.|..++..|++++++|++.|++||+||.|
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~D----- 99 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSID----- 99 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESS-----
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCC-----
Confidence 457999999999 457788999999999999999999 9999999999999999999999999999999998
Q ss_pred CCCChHHHHHHHHHh------cCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEc
Q 026028 156 EPGSNPEIKEFACTR------FKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERY 226 (244)
Q Consensus 156 ~~~~~~~~~~~~~~~------~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~ 226 (244)
+.+.+++|..+. ++++||+++|.+ ..+.+.|+.+....+- ..+.+||||++|+|++.+
T Consensus 100 ---s~~sh~~w~~~~~~~~~~~~l~fpllsD~~---~~va~~yGv~~~~~g~-------~~R~tFiIDp~g~Ir~~~ 163 (219)
T 3tue_A 100 ---SEYAHLQWTLQDRKKGGLGTMAIPILADKT---KNIARSYGVLEESQGV-------AYRGLFIIDPHGMLRQIT 163 (219)
T ss_dssp ---CHHHHHHHHHSCGGGTCCCSCSSCEEECTT---SHHHHHTTCEETTTTE-------ECEEEEEECTTSBEEEEE
T ss_pred ---chhhHHHHhhhhHHhcCccccccccccCcc---cHHHHHcCCcccCCCe-------eEEEEEEECCCCeEEEEE
Confidence 899999998322 368999996644 4588899887654431 128899999999999876
No 82
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.93 E-value=1.6e-25 Score=167.50 Aligned_cols=131 Identities=13% Similarity=0.236 Sum_probs=111.9
Q ss_pred CcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHH
Q 026028 86 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKE 165 (244)
Q Consensus 86 ~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~ 165 (244)
..+|+|++++.+|+.+++.+++||++||+||++||++|+.+++.|++++++++ ++.+++|++| ++.+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATR-------ADVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcC-------CCHHHHHH
Confidence 36899999999999999999999999999999999999999999999999997 6999999987 36888999
Q ss_pred HHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcC---CCCChhhHH-HHHHH
Q 026028 166 FACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYP---PTTSPFQIE-DIQKL 241 (244)
Q Consensus 166 ~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~---g~~~~~~l~-~i~~l 241 (244)
|+ ++++++||++.|.+ ....+.|+ +.+.|+++|||++|+|+ ++. |..+.++++ .|+++
T Consensus 73 ~~-~~~~~~~~~~~d~~---~~~~~~~~-------------i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 73 FV-SKYNLNFTNLNDAD---GVIWARYN-------------VPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HH-HHHTCCSEEEECTT---SHHHHHTT-------------CCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred HH-HHcCCCceEEECCc---hhHHHhcC-------------CCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 98 78899999995422 22333332 55669999999999999 999 988888998 88887
Q ss_pred Hh
Q 026028 242 VV 243 (244)
Q Consensus 242 L~ 243 (244)
|+
T Consensus 135 l~ 136 (136)
T 1lu4_A 135 TS 136 (136)
T ss_dssp --
T ss_pred hC
Confidence 63
No 83
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.93 E-value=1.5e-25 Score=183.06 Aligned_cols=148 Identities=14% Similarity=0.135 Sum_probs=112.8
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCC-E-EEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGK-V-LLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPG 158 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk-~-vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~ 158 (244)
.+.+|+.+|+|++.+.+| +++|++++|| + ||++||++|||+|..+++.|++++++|+++|++||+||+|
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D-------- 74 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID-------- 74 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------
Confidence 356899999999999999 9999999998 5 5556689999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHh----------cCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 159 SNPEIKEFACTR----------FKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 159 ~~~~~~~~~~~~----------~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
+.+.+.+|+ ++ ++++||++.|.+ ..+.+.|+.+........+. ....|++||||++|+|++.+.+
T Consensus 75 ~~~~~~~~~-~~i~~~~~~~~~~~~~fpil~D~~---~~va~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~ 149 (224)
T 1prx_A 75 SVEDHLAWS-KDINAYNSEEPTEKLPFPIIDDRN---RELAILLGMLDPAEKDEKGM-PVTARVVFVFGPDKKLKLSILY 149 (224)
T ss_dssp CHHHHHHHH-HHHHHHTTSCCCSCCSSCEEECTT---CHHHHHTTSSCSCTTCSSSC-CTTCCEEEEECTTSBEEEEEEC
T ss_pred CHHHHHHHH-HHHHHhhCcccccCcCcceeecCc---hHHHHHhCCCCcccccCCCc-cccceEEEEECCCCEEEEEEec
Confidence 778888888 44 789999996532 34666676543211000010 1234999999999999999865
Q ss_pred CC----ChhhHH-HHHHHH
Q 026028 229 TT----SPFQIE-DIQKLV 242 (244)
Q Consensus 229 ~~----~~~~l~-~i~~lL 242 (244)
.. +.+++. .|+.+.
T Consensus 150 ~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 150 PATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp CTTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
Confidence 33 345566 666654
No 84
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.93 E-value=6.3e-26 Score=177.18 Aligned_cols=134 Identities=12% Similarity=0.117 Sum_probs=107.5
Q ss_pred cccCCcccceEEE-cCCCCeeecCCc-CCCEEEEEEe-cCCCCCCHH-hHHHHHHHHHHhhcCCe-EEEEEecCCCCCCC
Q 026028 82 AATEKSLYDFTVK-DIDGKDVPLSKF-KGKVLLIVNV-ASRCGLTPS-NYSELSHLYEKYKTQGF-EILAFPCNQFGGQE 156 (244)
Q Consensus 82 ~~~g~~~pdf~l~-~~~g~~v~L~~~-~gk~vll~F~-~~~C~~C~~-~~~~l~~l~~~~~~~~~-~vi~Vs~D~~~~~~ 156 (244)
+.+|+++|+|+++ |.+|+.++|+++ +||++||+|| ++|||+|.. +++.|++++++|+++|+ +||+|+.|
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d------ 76 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN------ 76 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 4589999999999 999999999998 9999999886 999999999 99999999999999999 99999987
Q ss_pred CCChHHHHHHHHHhcCCC--cceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC
Q 026028 157 PGSNPEIKEFACTRFKAE--FPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT 230 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~--~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~ 230 (244)
+.+.+++|+ ++++++ ||++.|.+ ..+.+.|+...... ...+ .....|++||| ++|+|++.+.+..
T Consensus 77 --~~~~~~~~~-~~~~~~~~fp~l~D~~---~~~~~~~gv~~~~~-~~~g-~~~~~p~t~lI-~~G~I~~~~~~~~ 143 (167)
T 2wfc_A 77 --DSFVMDAWG-KAHGADDKVQMLADPG---GAFTKAVDMELDLS-AVLG-NVRSKRYSLVI-EDGVVTKVNVEPD 143 (167)
T ss_dssp --CHHHHHHHH-HHTTCTTTSEEEECTT---SHHHHHTTCEECCH-HHHS-SCEECCEEEEE-ETTEEEEEEECTT
T ss_pred --CHHHHHHHH-HhcCCCcceEEEECCC---CcHHHHcCCccccc-cccC-cccceEEEEEE-eCCEEEEEEecCC
Confidence 788999999 788998 99995532 34555565322100 0000 01233999999 9999999876643
No 85
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.93 E-value=4.6e-26 Score=180.61 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=108.2
Q ss_pred ccccCCcccceEEEcC--CC-CeeecCC-cCCCEEE-EEEecCCCCCCHH-hHHHHHHHHHHhhcCCeE-EEEEecCCCC
Q 026028 81 TAATEKSLYDFTVKDI--DG-KDVPLSK-FKGKVLL-IVNVASRCGLTPS-NYSELSHLYEKYKTQGFE-ILAFPCNQFG 153 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~--~g-~~v~L~~-~~gk~vl-l~F~~~~C~~C~~-~~~~l~~l~~~~~~~~~~-vi~Vs~D~~~ 153 (244)
.+.+|+++|+|++++. +| ++++|++ ++||++| ++||++|||+|.. +++.|++++++|+++|++ ||+|+.|
T Consensus 25 ~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d--- 101 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN--- 101 (184)
T ss_dssp CCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS---
T ss_pred cCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC---
Confidence 4679999999999998 99 9999999 8999554 5566999999999 799999999999999999 9999988
Q ss_pred CCCCCChHHHHHHHHHhcCCC--cceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC
Q 026028 154 GQEPGSNPEIKEFACTRFKAE--FPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT 230 (244)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~--~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~ 230 (244)
+.+.+++|+ ++++++ ||++.|.+ ..+.+.|+....... .+..+...|.+|||| +|+|++.+.+..
T Consensus 102 -----~~~~~~~f~-~~~~~~~~fp~l~D~~---~~va~~yGv~~~~~~--~g~g~~~~r~tfiId-dG~I~~~~~~~~ 168 (184)
T 3uma_A 102 -----DLHVMGAWA-THSGGMGKIHFLSDWN---AAFTKAIGMEIDLSA--GTLGIRSKRYSMLVE-DGVVKALNIEES 168 (184)
T ss_dssp -----CHHHHHHHH-HHHTCTTTSEEEECTT---CHHHHHTTCEEEEGG--GTCEEEECCEEEEEE-TTEEEEEEECSS
T ss_pred -----CHHHHHHHH-HHhCCCCceEEEEcCc---hHHHHHcCCceeccc--cCCcccceeEEEEEC-CCEEEEEEEeCC
Confidence 788999999 788998 99996533 346677765332110 011123348899997 999999987653
No 86
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.92 E-value=5.6e-25 Score=164.06 Aligned_cols=135 Identities=19% Similarity=0.334 Sum_probs=111.5
Q ss_pred cccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHH
Q 026028 87 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEF 166 (244)
Q Consensus 87 ~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~ 166 (244)
++|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++++ .++.+++|..+.. ...++.+.+.+|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~~--~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPGH--KGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTTS--TTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCCC--CchhhHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999965 4599999965421 234688899999
Q ss_pred HHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHH
Q 026028 167 ACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 167 ~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
. ++++. +|+++.|. + ....+.|+ +.+.|+++|||++|+|++++.|..+.+++. .|+++
T Consensus 78 ~-~~~~~~~~~~~~d~--~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 Y-KGLDYKNLPVLVDP--S-GKLLETYG-------------VRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp H-TTCCCTTCCEEECT--T-CHHHHHTT-------------CCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred H-hhcCCCCeeEEECc--c-hHHHHHcC-------------cccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 8 78888 89998542 2 22333333 556699999999999999999998888888 77664
No 87
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.92 E-value=1.9e-25 Score=173.74 Aligned_cols=137 Identities=18% Similarity=0.222 Sum_probs=113.6
Q ss_pred cccccCCcccceEEEcC--CCCeeecCCc-CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCC
Q 026028 80 ATAATEKSLYDFTVKDI--DGKDVPLSKF-KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQE 156 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~--~g~~v~L~~~-~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~ 156 (244)
....+|+.+|+|++++. +|+.++++++ +||++||+||++||++|+.+++.|++++++ +++|++|++|
T Consensus 20 ~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~------ 89 (168)
T 2b1k_A 20 ESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYK------ 89 (168)
T ss_dssp CCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEES------
T ss_pred cccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECC------
Confidence 45668999999999999 9999999985 999999999999999999999999999875 6999999987
Q ss_pred CCChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 026028 157 PGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE 236 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~ 236 (244)
++.+.+.+|+ ++++++|+.+. .|.+ ....+.|+ |.++|++||||++|+|++++.|..+.++++
T Consensus 90 -~~~~~~~~~~-~~~~~~~~~~~-~d~~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 152 (168)
T 2b1k_A 90 -DDRQKAISWL-KELGNPYALSL-FDGD-GMLGLDLG-------------VYGAPETFLIDGNGIIRYRHAGDLNPRVWE 152 (168)
T ss_dssp -CCHHHHHHHH-HHHCCCCSEEE-EETT-CHHHHHHT-------------CCSSSEEEEECTTSBEEEEEESCCCHHHHH
T ss_pred -CChHHHHHHH-HHcCCCCceee-ECcc-hHHHHHcC-------------ccccCEEEEECCCCeEEEEEeCCCCHHHHH
Confidence 3678899998 78899998431 2322 22333333 556699999999999999999988888888
Q ss_pred -HHHHHHh
Q 026028 237 -DIQKLVV 243 (244)
Q Consensus 237 -~i~~lL~ 243 (244)
.|+++++
T Consensus 153 ~~l~~~l~ 160 (168)
T 2b1k_A 153 EEIKPLWE 160 (168)
T ss_dssp HTTHHHHH
T ss_pred HHHHHHHH
Confidence 8887765
No 88
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.92 E-value=2.4e-25 Score=182.64 Aligned_cols=148 Identities=13% Similarity=0.185 Sum_probs=114.5
Q ss_pred cccCCcccceEEEcCCCCeeecCCcCCC-EEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKFKGK-VLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~~gk-~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
+.+|+.+|+|++++.+| +++|++++|| ++||+|| ++|||+|..+++.|++++++|+++|++||+||+| +
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~ 73 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------N 73 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------C
Confidence 45899999999999999 9999999998 9999998 9999999999999999999999999999999998 7
Q ss_pred hHHHHHHHHH-----hc--CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC--
Q 026028 160 NPEIKEFACT-----RF--KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT-- 230 (244)
Q Consensus 160 ~~~~~~~~~~-----~~--~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~-- 230 (244)
.+.+++|++. ++ +++||++.|. . ..+.+.|+.+........+. ....|++||||++|+|++.+.+..
T Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~fpil~D~--~-~~va~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~~~~ 149 (233)
T 2v2g_A 74 VADHKEWSEDVKCLSGVKGDMPYPIIADE--T-RELAVKLGMVDPDERTSTGM-PLTCRAVFIIGPDKKLKLSILYPATT 149 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCSSCSSCEEECT--T-CHHHHHTTCEEEEEECTTCC-EEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HHHHHHHHHHHHHhhCcccCCceEEEECC--h-HHHHHHhCCcCcccccCCCc-ccccceEEEECCCCEEEEEEecCCCC
Confidence 7888888832 56 8999999653 2 34666676543211000010 113599999999999999875433
Q ss_pred --ChhhHH-HHHHHH
Q 026028 231 --SPFQIE-DIQKLV 242 (244)
Q Consensus 231 --~~~~l~-~i~~lL 242 (244)
+.+++. .|+.+.
T Consensus 150 gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 150 GRNFSEILRVIDSLQ 164 (233)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 345555 666553
No 89
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.92 E-value=1.6e-25 Score=173.05 Aligned_cols=139 Identities=17% Similarity=0.160 Sum_probs=113.9
Q ss_pred cCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHH
Q 026028 84 TEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI 163 (244)
Q Consensus 84 ~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~ 163 (244)
.|+.+| +++|.+|+.+++.+++||++||+||++||++|+.+++.|++++++|++.+++||+|++|.. ...++.+.+
T Consensus 16 ~~~~~p--~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~--~~~~~~~~~ 91 (164)
T 2h30_A 16 VPHTMS--TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGF--LHEKKDGEF 91 (164)
T ss_dssp HHHHHT--TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTS--TTCCCTTHH
T ss_pred cCCcCC--ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCC--ccccCHHHH
Confidence 455566 7889999999999999999999999999999999999999999999989999999999743 234567788
Q ss_pred HHHHHHhcCCC-cceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHH
Q 026028 164 KEFACTRFKAE-FPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 164 ~~~~~~~~~~~-~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
.+|. ++++++ +++.. |.+ ....+.|+ |.++|++||||++|++++++.|..+.++++ .|+++
T Consensus 92 ~~~~-~~~~~~~~~~~~--d~~-~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 92 QKWY-AGLNYPKLPVVT--DNG-GTIAQNLN-------------ISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp HHHH-TTSCCTTSCEEE--CTT-CHHHHHTT-------------CCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred HHHH-HhCCCCcceEEE--cCc-hHHHHHcC-------------CCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 8888 666777 77774 322 22333333 566799999999999999999988888888 88877
Q ss_pred Hh
Q 026028 242 VV 243 (244)
Q Consensus 242 L~ 243 (244)
++
T Consensus 155 ~~ 156 (164)
T 2h30_A 155 NA 156 (164)
T ss_dssp TC
T ss_pred HH
Confidence 64
No 90
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=9.6e-27 Score=179.49 Aligned_cols=139 Identities=20% Similarity=0.305 Sum_probs=112.9
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHH-HHHHhh-cCCeEEEEEecCCCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSH-LYEKYK-TQGFEILAFPCNQFGGQEPG 158 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~-l~~~~~-~~~~~vi~Vs~D~~~~~~~~ 158 (244)
.+.+|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++ ++++++ +.++++++|++| +
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d-------~ 78 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRD-------E 78 (159)
Confidence 3568999999999999999999999999999999999999999999999998 999998 678999999987 2
Q ss_pred ChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-H
Q 026028 159 SNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-D 237 (244)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~ 237 (244)
+.+.+++|. ++++++||++.|.+ ..+.+.|+. .+.+.|++||||++|+|++++.|. ++++++ .
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~~d~~---~~~~~~~~~-----------~~~~~P~~~lid~~G~i~~~~~g~-~~~~l~~~ 142 (159)
T 2ls5_A 79 PLEKVLAFA-KSTGVTYPLGLDPG---ADIFAKYAL-----------RDAGITRNVLIDREGKIVKLTRLY-NEEEFASL 142 (159)
Confidence 445678888 78899999995433 234444432 123359999999999999998874 455666 6
Q ss_pred HHHHH
Q 026028 238 IQKLV 242 (244)
Q Consensus 238 i~~lL 242 (244)
|+++.
T Consensus 143 l~~l~ 147 (159)
T 2ls5_A 143 VQQIN 147 (159)
Confidence 65554
No 91
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.92 E-value=4.1e-25 Score=179.97 Aligned_cols=148 Identities=17% Similarity=0.208 Sum_probs=112.3
Q ss_pred cccCCcccceEEEcC--CCCeeecCCcCCC-EEEE-EEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 82 AATEKSLYDFTVKDI--DGKDVPLSKFKGK-VLLI-VNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~--~g~~v~L~~~~gk-~vll-~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
+.+|+++|+|++++. +| +++|++++|| ++|| +||++|||+|..+++.|++++++|+++|++||+||+|
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D------- 74 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN------- 74 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------
Confidence 458999999999999 99 8999999998 5555 4579999999999999999999999999999999998
Q ss_pred CChHHHHHHHH------HhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC-
Q 026028 158 GSNPEIKEFAC------TRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT- 230 (244)
Q Consensus 158 ~~~~~~~~~~~------~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~- 230 (244)
+.+.+++|.+ .+++++||++.|. + ..+.+.|+.+........+. ....|++||||++|+|++.+.+..
T Consensus 75 -~~~~~~~~~~~i~~~~~~~~~~fpil~D~--~-~~va~~ygv~~~~~~~~~g~-~~~~p~~flID~~G~I~~~~~~~~~ 149 (220)
T 1xcc_A 75 -SKESHDKWIEDIKYYGKLNKWEIPIVCDE--S-RELANKLKIMDEQEKDITGL-PLTCRCLFFISPEKKIKATVLYPAT 149 (220)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCCCCCEEECT--T-SHHHHHHTCEEEEEECTTSC-EEECEEEEEECTTSBEEEEEEECTT
T ss_pred -CHHHHHHHHHHHHHHhcCCCCcceeEECc--h-hHHHHHhCCCCcccccCCCC-CcccceEEEECCCCEEEEEEecCCC
Confidence 6778888873 1578999999653 2 34667776543211000010 123599999999999999875432
Q ss_pred ---ChhhHH-HHHHHH
Q 026028 231 ---SPFQIE-DIQKLV 242 (244)
Q Consensus 231 ---~~~~l~-~i~~lL 242 (244)
+.+++. .|+++.
T Consensus 150 ~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 150 TGRNAHEILRVLKSLQ 165 (220)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 455666 666653
No 92
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.92 E-value=4.3e-25 Score=169.18 Aligned_cols=137 Identities=18% Similarity=0.253 Sum_probs=110.9
Q ss_pred cccccCCcccceEEEcCCC--------CeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCC
Q 026028 80 ATAATEKSLYDFTVKDIDG--------KDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQ 151 (244)
Q Consensus 80 ~~~~~g~~~pdf~l~~~~g--------~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~ 151 (244)
....+|+.+|+|++++.+| +.+++++++||++||+||++||++|+.+++.|++++++ .++.+++|++|
T Consensus 6 ~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~- 81 (156)
T 1kng_A 6 PSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYK- 81 (156)
T ss_dssp ------CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES-
T ss_pred hhHHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECC-
Confidence 3456899999999999999 99999999999999999999999999999999999876 34999999987
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCcc-eeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC
Q 026028 152 FGGQEPGSNPEIKEFACTRFKAEFP-IFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT 230 (244)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~p-~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~ 230 (244)
++.+.+++|+ ++++++|+ ++.| .. ....+.|+ +.++|++||||++|++++++.|..
T Consensus 82 ------~~~~~~~~~~-~~~~~~~~~~~~d--~~-~~~~~~~~-------------v~~~P~~~~id~~G~i~~~~~g~~ 138 (156)
T 1kng_A 82 ------DAADNARRFL-GRYGNPFGRVGVD--AN-GRASIEWG-------------VYGVPETFVVGREGTIVYKLVGPI 138 (156)
T ss_dssp ------CCHHHHHHHH-HHHCCCCSEEEEE--TT-SHHHHHTT-------------CCSSCEEEEECTTSBEEEEEESCC
T ss_pred ------CCHHHHHHHH-HHcCCCCceeeeC--ch-hHHHHhcC-------------cCccCeEEEEcCCCCEEEEEeCCC
Confidence 3778899998 78899999 5533 22 22333332 556699999999999999999998
Q ss_pred ChhhHH-HHHHHHh
Q 026028 231 SPFQIE-DIQKLVV 243 (244)
Q Consensus 231 ~~~~l~-~i~~lL~ 243 (244)
+.++++ .|+++|+
T Consensus 139 ~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 139 TPDNLRSVLLPQME 152 (156)
T ss_dssp CHHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 888888 8888775
No 93
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.91 E-value=4.7e-24 Score=173.01 Aligned_cols=142 Identities=15% Similarity=0.094 Sum_probs=109.9
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCC-CCCCH-----HhHHHHHHHHHHhhcCCeEEEEEecCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASR-CGLTP-----SNYSELSHLYEKYKTQGFEILAFPCNQFGG 154 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~-C~~C~-----~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~ 154 (244)
.+.+|+++|+|+|+|.+|+.++|++++||++||+||.+| ||+|. .+++.|+++ | +|++||+||.|
T Consensus 21 ~l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D---- 91 (224)
T 3keb_A 21 FPRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD---- 91 (224)
T ss_dssp CCCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS----
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC----
Confidence 356899999999999999999999999999999999877 99999 888888877 5 67999999987
Q ss_pred CCCCChHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC-----
Q 026028 155 QEPGSNPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP----- 228 (244)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g----- 228 (244)
+.+.+++|+ +++++ +||++.|. ....+.+.|+..... +...+ ...|++||||++|+|++.+..
T Consensus 92 ----s~~~~~~f~-~~~gl~~fplLsD~--~~~~vak~yGv~~~~-~~~~G---~~~p~tfvID~dG~I~~~~~~~~~~~ 160 (224)
T 3keb_A 92 ----SPSSLARAR-HEHGLPNIALLSTL--RGRDFHKRYGVLITE-YPLSG---YTSPAIILADAANVVHYSERLANTRD 160 (224)
T ss_dssp ----CHHHHHHHH-HHHCCTTCEEEEST--TCTTHHHHTTCBCCS-TTSTT---CBCCEEEEECTTCBEEEEEECSBTTC
T ss_pred ----CHHHHHHHH-HHcCCCCceEEEcC--CchHHHHHhCCcccc-ccccC---CccCEEEEEcCCCEEEEEEecCCCCC
Confidence 889999999 78899 79999553 224567777754321 01111 124999999999999988643
Q ss_pred CCChhhHH-HHHHHH
Q 026028 229 TTSPFQIE-DIQKLV 242 (244)
Q Consensus 229 ~~~~~~l~-~i~~lL 242 (244)
..+.+++. .|+.+.
T Consensus 161 ~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 161 FFDFDAIEKLLQEGE 175 (224)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhh
Confidence 23345555 655553
No 94
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.91 E-value=1.1e-24 Score=180.05 Aligned_cols=143 Identities=15% Similarity=0.216 Sum_probs=113.6
Q ss_pred cccCCcccceEEEcCCCCeeec-CCc--CCCEEE-EEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 82 AATEKSLYDFTVKDIDGKDVPL-SKF--KGKVLL-IVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L-~~~--~gk~vl-l~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
+.+|+.+|+|++++.+| .++| +++ +||++| ++||++||++|..+++.|++++++|+++|++||+||+|
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D------- 76 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD------- 76 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS-------
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC-------
Confidence 45899999999999999 7999 999 999755 57789999999999999999999999999999999998
Q ss_pred CChHHHHHHHHH-----hcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC--
Q 026028 158 GSNPEIKEFACT-----RFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT-- 230 (244)
Q Consensus 158 ~~~~~~~~~~~~-----~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~-- 230 (244)
+.+.+.+|... ..+++||++.|.+ ..+.+.|+.+....+ +...|++||||++|+|++.+.+..
T Consensus 77 -s~~~~~~w~~~~~~~~~~~i~fPil~D~~---~~ia~~ygv~~~~~g------~~~~p~~fIID~dG~I~~~~~~~~~~ 146 (249)
T 3a2v_A 77 -SVFSHIKWKEWIERHIGVRIPFPIIADPQ---GTVARRLGLLHAESA------THTVRGVFIVDARGVIRTMLYYPMEL 146 (249)
T ss_dssp -CHHHHHHHHHHHHHHTCCCCCSCEEECTT---SHHHHHHTCCCTTCS------SSCCEEEEEECTTSBEEEEEEECTTB
T ss_pred -CHHHHHHHHHHHHHhcCCCCceeEEECCc---hHHHHHhCCccccCC------CcccceEEEECCCCeEEEEEecCCcc
Confidence 77888888732 1588999996532 346677765432221 224599999999999999876654
Q ss_pred --ChhhHH-HHHHHH
Q 026028 231 --SPFQIE-DIQKLV 242 (244)
Q Consensus 231 --~~~~l~-~i~~lL 242 (244)
+.+++. .|+++.
T Consensus 147 gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 147 GRLVDEILRIVKALK 161 (249)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHH
Confidence 455666 666654
No 95
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.91 E-value=9.6e-25 Score=171.07 Aligned_cols=135 Identities=13% Similarity=0.206 Sum_probs=103.7
Q ss_pred ccccCCcccceEEEcC----CC-----CeeecCCc-CCC-EEEEEEecCCCCCCHHh-HHHHHHHHHHhhcCCeE-EEEE
Q 026028 81 TAATEKSLYDFTVKDI----DG-----KDVPLSKF-KGK-VLLIVNVASRCGLTPSN-YSELSHLYEKYKTQGFE-ILAF 147 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~----~g-----~~v~L~~~-~gk-~vll~F~~~~C~~C~~~-~~~l~~l~~~~~~~~~~-vi~V 147 (244)
...+|+++|+|++++. +| +.++|+++ +|| +||++||++|||+|..+ ++.|++++++|+++|++ |++|
T Consensus 6 g~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 6 GTDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp ----CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred cccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 3456779999999998 57 89999996 996 66778999999999999 99999999999999999 9999
Q ss_pred ecCCCCCCCCCChHHHHHHHHHhcCC--CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEE
Q 026028 148 PCNQFGGQEPGSNPEIKEFACTRFKA--EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIER 225 (244)
Q Consensus 148 s~D~~~~~~~~~~~~~~~~~~~~~~~--~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~ 225 (244)
+.| +.+.+++|+ +++++ +||++.|. + ..+.+.|+....... .+.++...|++|+|| +|+|++.
T Consensus 86 s~d--------~~~~~~~~~-~~~~~~~~fp~l~D~--~-~~~~~~ygv~~~~~~--~~~g~~~~~~t~~I~-~G~I~~~ 150 (171)
T 2pwj_A 86 AIN--------DPYTVNAWA-EKIQAKDAIEFYGDF--D-GSFHKSLELTTDLSA--GLLGIRSERWSAYVV-DGKVKAL 150 (171)
T ss_dssp ESS--------CHHHHHHHH-HHTTCTTTSEEEECT--T-CHHHHHHTCEEECTT--TTCCEEECCEEEEEE-TTEEEEE
T ss_pred eCC--------CHHHHHHHH-HHhCCCCceEEEECC--c-cHHHHHhCCcccccc--ccCCcccceeEEEEE-CCEEEEE
Confidence 987 778899998 77785 79999553 2 346666764321100 011122347889999 9999999
Q ss_pred cCCCC
Q 026028 226 YPPTT 230 (244)
Q Consensus 226 ~~g~~ 230 (244)
+.|..
T Consensus 151 ~~~~~ 155 (171)
T 2pwj_A 151 NVEES 155 (171)
T ss_dssp EECSS
T ss_pred EeecC
Confidence 87754
No 96
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.90 E-value=3.2e-24 Score=176.85 Aligned_cols=136 Identities=20% Similarity=0.224 Sum_probs=109.2
Q ss_pred cccCCcccceEEEcC-CCC--eeecCC-cCCCEEEEEEe-cCCCCCCH-HhHHHHHHHHHHhhcCCe-EEEEEecCCCCC
Q 026028 82 AATEKSLYDFTVKDI-DGK--DVPLSK-FKGKVLLIVNV-ASRCGLTP-SNYSELSHLYEKYKTQGF-EILAFPCNQFGG 154 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~-~g~--~v~L~~-~~gk~vll~F~-~~~C~~C~-~~~~~l~~l~~~~~~~~~-~vi~Vs~D~~~~ 154 (244)
+.+|+++|+|++++. +|+ .++|++ ++||++||+|| ++|||+|+ .+++.|++++++|+++|+ +||+|+.|
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d---- 78 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN---- 78 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS----
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC----
Confidence 458999999999996 777 999999 89999999999 99999999 999999999999999999 99999987
Q ss_pred CCCCChHHHHHHHHHhcCCC-cceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCCh
Q 026028 155 QEPGSNPEIKEFACTRFKAE-FPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSP 232 (244)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~ 232 (244)
+.+.+++|+ ++++++ ||++.|.+ ..+.+.|+...... ..|......|++||| ++|+|++.+.|....
T Consensus 79 ----~~~~~~~~~-~~~~~~~~~~l~D~~---~~~~~~~gv~~~~~--~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~ 146 (241)
T 1nm3_A 79 ----DTFVMNAWK-EDEKSENISFIPDGN---GEFTEGMGMLVGKE--DLGFGKRSWRYSMLV-KNGVVEKMFIEPNEP 146 (241)
T ss_dssp ----CHHHHHHHH-HHTTCTTSEEEECTT---SHHHHHTTCEEECT--TTTCCEEECCEEEEE-ETTEEEEEEECCSCS
T ss_pred ----CHHHHHHHH-HhcCCCceEEEECCC---cHHHHHhCceeecc--cccCcccceeEEEEE-ECCEEEEEEEeccCC
Confidence 788999999 788886 99995532 33556665432110 011111234899999 999999998876543
No 97
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.90 E-value=9.4e-24 Score=181.07 Aligned_cols=126 Identities=14% Similarity=0.211 Sum_probs=103.9
Q ss_pred CcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHH
Q 026028 86 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIK 164 (244)
Q Consensus 86 ~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~ 164 (244)
.++|+|+|+|.+|++++|+||+||+|||+|| +.|||+|..+++.|++ ...+|++||+||.| +.+.++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~ 69 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALK 69 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHH
Confidence 3799999999999999999999999999999 7899999999888864 23357999999987 899999
Q ss_pred HHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 026028 165 EFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE 236 (244)
Q Consensus 165 ~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~ 236 (244)
+|+ ++++++||++.|.+ ..+.+.|+.+.. + ...|++||||++|+|++.|.+.....+.+
T Consensus 70 ~f~-~~~~l~fp~l~D~~---~~v~~~ygv~~~--~-------~~~r~tfiId~~G~i~~~~~~v~~~~h~~ 128 (322)
T 4eo3_A 70 RFK-EKNDLKVTLLSDPE---GILHEFFNVLEN--G-------KTVRSTFLIDRWGFVRKEWRRVKVEGHVQ 128 (322)
T ss_dssp HHH-HHHTCCSEEEECTT---CHHHHHTTCEET--T-------EECCEEEEECTTSBEEEEEESCCSTTHHH
T ss_pred HHH-HhhCCceEEEEcCc---hHHHHhcCCCCC--C-------cCccEEEEECCCCEEEEEEeCCCccccHH
Confidence 999 88999999996533 457777775432 1 12389999999999999998876555544
No 98
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.89 E-value=6.6e-24 Score=160.86 Aligned_cols=120 Identities=18% Similarity=0.226 Sum_probs=95.9
Q ss_pred cCCcccc-eEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc-CCeEEEEEecCCCCCCCCCChH
Q 026028 84 TEKSLYD-FTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT-QGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 84 ~g~~~pd-f~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
.|+.+|+ |++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|++ .+++|++|++| ++.+
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d-------~~~~ 75 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWD-------ESAE 75 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCHH
Confidence 6789999 9999999999999999999999999999999999999999999999985 57999999998 3678
Q ss_pred HHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEEC-CCCcEEEEc
Q 026028 162 EIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVD-KNGKVIERY 226 (244)
Q Consensus 162 ~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID-~~G~I~~~~ 226 (244)
.+++|+ ++++. .+|+.. .|. ...+.+.|+ |..+|+++||| ++|+|++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~-~d~-~~~~~~~~~-------------v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 76 DFKDYY-AKMPWLALPFED-RKG-MEFLTTGFD-------------VKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp HHHHHH-TTCSSEECCTTC-HHH-HHHHHHHTT-------------CCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHH-HhCCccccccCc-hHH-HHHHHHHcC-------------CCCCCEEEEEECCCCcEEecc
Confidence 888998 55542 444431 010 011122221 55669999999 999999876
No 99
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.89 E-value=2.3e-24 Score=167.72 Aligned_cols=124 Identities=15% Similarity=0.231 Sum_probs=96.7
Q ss_pred cccccCCcccce-EEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc-CCeEEEEEecCCCCCCCC
Q 026028 80 ATAATEKSLYDF-TVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT-QGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 80 ~~~~~g~~~pdf-~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vi~Vs~D~~~~~~~ 157 (244)
+...+|+.+|+| ++++.+| .++|++++||++||+||++||++|+.++|.|++++++|++ .+++||+|++|
T Consensus 20 ~~~~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d------- 91 (165)
T 3s9f_A 20 HMSGVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWD------- 91 (165)
T ss_dssp --CHHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------
T ss_pred hhhhhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecC-------
Confidence 455699999999 9999999 9999999999999999999999999999999999999987 68999999998
Q ss_pred CChHHHHHHHHHhcC-CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCC-CcEEEEcC
Q 026028 158 GSNPEIKEFACTRFK-AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKN-GKVIERYP 227 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~-~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~-G~I~~~~~ 227 (244)
++.+++++|+ ++++ ..+++..+. ....+.+.|+ |..+|++||||++ |+|+++..
T Consensus 92 ~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~l~~~~~-------------v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 92 EEEDDFNAYY-AKMPWLSIPFANRN--IVEALTKKYS-------------VESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp CSHHHHHHHH-TTCSSEECCTTCHH--HHHHHHHHTT-------------CCSSSEEEEEETTTCCEEESCH
T ss_pred CCHHHHHHHH-HhCCCcccccCchh--HHHHHHHHcC-------------CCCCCEEEEEeCCCCEEEeccc
Confidence 3678888888 5543 233333110 0011122221 5667999999998 99998753
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.88 E-value=2.6e-23 Score=158.00 Aligned_cols=121 Identities=17% Similarity=0.286 Sum_probs=95.8
Q ss_pred ccCCcccc-eEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc-CCeEEEEEecCCCCCCCCCCh
Q 026028 83 ATEKSLYD-FTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT-QGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 83 ~~g~~~pd-f~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
..|+.+|+ |+++|.+| .+++++++||++||+||++||++|+.+++.|++++++|++ .+++|++|++| ++.
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d-------~~~ 74 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWD-------EEE 74 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCC-------CCH
Confidence 36889999 99999999 9999999999999999999999999999999999999984 67999999998 367
Q ss_pred HHHHHHHHHhcC-CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEEC-CCCcEEEEcC
Q 026028 161 PEIKEFACTRFK-AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVD-KNGKVIERYP 227 (244)
Q Consensus 161 ~~~~~~~~~~~~-~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID-~~G~I~~~~~ 227 (244)
+.+++|+ ++++ ..+|+.. .|. .....+.|+ |..+|+++||| ++|+|++++.
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~d~-~~~~~~~~~-------------v~~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 75 DGFAGYF-AKMPWLAVPFAQ-SEA-VQKLSKHFN-------------VESIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp HHHHHHH-TTCSSEECCGGG-HHH-HHHHHHHTT-------------CCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HHCCceeeccch-hhH-HHHHHHHhC-------------CCCCCEEEEEECCCCeEEEecc
Confidence 8888998 5544 3455441 010 011122221 55669999999 9999998763
No 101
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.79 E-value=4.5e-24 Score=161.10 Aligned_cols=122 Identities=14% Similarity=0.180 Sum_probs=98.7
Q ss_pred CcccceEEEcCCCCeeecCC-cCCC-EEEEEEecCCCCCCHHhHHHHHHHHHHhhc--CCeEEEEEecCCCCCCCCCChH
Q 026028 86 KSLYDFTVKDIDGKDVPLSK-FKGK-VLLIVNVASRCGLTPSNYSELSHLYEKYKT--QGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 86 ~~~pdf~l~~~~g~~v~L~~-~~gk-~vll~F~~~~C~~C~~~~~~l~~l~~~~~~--~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
+.+|+|++++.+|+.+++++ ++|| ++||+||++||++|+.+++.|++++++|++ .++++++|++| ++.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d-------~~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSD-------RSED 74 (143)
Confidence 36899999999999999999 9999 999999999999999999999999999953 47999999988 2566
Q ss_pred HHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 162 EIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
.+++|+ ++++++|+.+...+.......+.|+ +..+|+++|||++|+|++++.+
T Consensus 75 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------v~~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 75 DMFQYM-MESHGDWLAIPYRSGPASNVTAKYG-------------ITGIPALVIVKKDGTLISMNGR 127 (143)
Confidence 788888 7888887765322222223444443 4556999999999999988533
No 102
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.87 E-value=1.5e-22 Score=158.39 Aligned_cols=134 Identities=10% Similarity=0.061 Sum_probs=106.8
Q ss_pred ccccCCcccceEEEcCCC----------CeeecCCc-CCCEEEE-EEecCCCCCCHH-hHHHHHHHHHHhhcCCe-EEEE
Q 026028 81 TAATEKSLYDFTVKDIDG----------KDVPLSKF-KGKVLLI-VNVASRCGLTPS-NYSELSHLYEKYKTQGF-EILA 146 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g----------~~v~L~~~-~gk~vll-~F~~~~C~~C~~-~~~~l~~l~~~~~~~~~-~vi~ 146 (244)
.+.+|+++|+.++...++ ++++|+++ +||++|| +||++|||+|.. +++.|++.+++|+++|+ +|++
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vig 88 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWC 88 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 467899999988877543 67999997 9996655 666999999999 99999999999999999 9999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHhcCCC--cceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEE
Q 026028 147 FPCNQFGGQEPGSNPEIKEFACTRFKAE--FPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIE 224 (244)
Q Consensus 147 Vs~D~~~~~~~~~~~~~~~~~~~~~~~~--~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~ 224 (244)
||.| +.+.+++|. ++++++ ||+++|.+ ..+.+.|+...... ..|-++...|.+||| ++|+|++
T Consensus 89 IS~D--------~~~~~~~f~-~~~~l~~~f~lLsD~~---~~va~ayGv~~~~~--~~G~g~~s~R~tfII-~dG~I~~ 153 (176)
T 4f82_A 89 VSVN--------DAFVMGAWG-RDLHTAGKVRMMADGS---AAFTHALGLTQDLS--ARGMGIRSLRYAMVI-DGGVVKT 153 (176)
T ss_dssp EESS--------CHHHHHHHH-HHTTCTTTSEEEECTT---CHHHHHHTCEEECG--GGTCCEEECCEEEEE-ETTEEEE
T ss_pred EeCC--------CHHHHHHHH-HHhCCCCCceEEEcCc---hHHHHHhCCCcccc--ccCCCcccccEEEEE-cCCEEEE
Confidence 9988 899999999 788888 99996643 45777887653321 011112334889999 9999999
Q ss_pred EcCCC
Q 026028 225 RYPPT 229 (244)
Q Consensus 225 ~~~g~ 229 (244)
.+.+.
T Consensus 154 ~~~~~ 158 (176)
T 4f82_A 154 LAVEA 158 (176)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 88754
No 103
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.87 E-value=5.4e-23 Score=155.57 Aligned_cols=121 Identities=17% Similarity=0.275 Sum_probs=94.4
Q ss_pred ccCCcccce-EEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhh-cCCeEEEEEecCCCCCCCCCCh
Q 026028 83 ATEKSLYDF-TVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYK-TQGFEILAFPCNQFGGQEPGSN 160 (244)
Q Consensus 83 ~~g~~~pdf-~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~-~~~~~vi~Vs~D~~~~~~~~~~ 160 (244)
..|+.+|+| +++|.+| .+++++++||++||+||++||++|+.+++.|++++++|+ +.+++|++|++| ++.
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d-------~~~ 74 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWD-------ENE 74 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSH
T ss_pred chhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCH
Confidence 478899997 9999999 999999999999999999999999999999999999998 357999999998 356
Q ss_pred HHHHHHHHHhcC-CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEEC-CCCcEEEEcC
Q 026028 161 PEIKEFACTRFK-AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVD-KNGKVIERYP 227 (244)
Q Consensus 161 ~~~~~~~~~~~~-~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID-~~G~I~~~~~ 227 (244)
+.+++|+ ++++ ..+|+.. .| ......+.|+ |..+|+++||| ++|+|++++.
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~~-~~~~~~~~~~-------------v~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 75 SDFHDYY-GKMPWLALPFDQ-RS-TVSELGKTFG-------------VESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHHHH-TTCSSEECCTTC-HH-HHHHHHHHHT-------------CCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HhCCceEeeccc-hh-HHHHHHHHcC-------------CCCCCEEEEEECCCCeEEecch
Confidence 7888888 5543 2333321 01 0011222222 55669999999 8999998763
No 104
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.86 E-value=1.2e-21 Score=152.79 Aligned_cols=134 Identities=14% Similarity=0.202 Sum_probs=107.4
Q ss_pred ccccCCcccceEEEcCCC-CeeecCC-cCCCEEEEEEe-cCCCCCCHHhHHHHHHHHHHhhcCCeE-EEEEecCCCCCCC
Q 026028 81 TAATEKSLYDFTVKDIDG-KDVPLSK-FKGKVLLIVNV-ASRCGLTPSNYSELSHLYEKYKTQGFE-ILAFPCNQFGGQE 156 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g-~~v~L~~-~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~-vi~Vs~D~~~~~~ 156 (244)
.+.+|+++|+|++++.++ ++++|++ ++||++||+|| +.|||.|..+++.+++.+++|+++|++ |++||.|
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D------ 86 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN------ 86 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 467999999999995432 8999999 49999999888 889999999999999999999999996 9999998
Q ss_pred CCChHHHHHHHHHhcCC--CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 157 PGSNPEIKEFACTRFKA--EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~~~--~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+...+++|. +++++ +||+++|.+ ..+.+.|+.+..... .+......+.+|||| +|+|++.+...
T Consensus 87 --~~~~~~~w~-~~~~~~~~f~lLSD~~---~~~a~ayGv~~~~~~--~g~g~~~~R~tfvId-dG~V~~~~v~~ 152 (171)
T 2xhf_A 87 --DPFVMAAWG-KTVDPEHKIRMLADMH---GEFTRALGTELDSSK--MLGNNRSRRYAMLID-DNKIRSVSTEP 152 (171)
T ss_dssp --CHHHHHHHH-HHHCTTCCSEEEECTT---SHHHHHHTCBCCCHH--HHSSCCBCCEEEEEE-TTEEEEEEETT
T ss_pred --CHHHHHHHH-HhcCCCCCeEEEEeCC---chHHHHhCCceeccc--cCCCcceEEEEEEEe-CCEEEEEEEeC
Confidence 999999999 67788 899996633 457788886533210 000112237899999 99999988654
No 105
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.84 E-value=2.9e-21 Score=152.34 Aligned_cols=131 Identities=10% Similarity=0.123 Sum_probs=104.1
Q ss_pred ccCCcccceEEEc--C---------CC----CeeecCC-cCCCEEEEEEe-cCCCCCCH-HhHHHHHHHHHHh-hcCCeE
Q 026028 83 ATEKSLYDFTVKD--I---------DG----KDVPLSK-FKGKVLLIVNV-ASRCGLTP-SNYSELSHLYEKY-KTQGFE 143 (244)
Q Consensus 83 ~~g~~~pdf~l~~--~---------~g----~~v~L~~-~~gk~vll~F~-~~~C~~C~-~~~~~l~~l~~~~-~~~~~~ 143 (244)
.+|+++|+|++++ . +| +.++|++ ++||++||+|| +.|||.|. .+++.+++.+++| ++.|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 4799999999998 4 67 7999998 69999888887 89999999 9999999999999 999995
Q ss_pred -EEEEecCCCCCCCCCChHHHHHHHHHhcCC-CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCc
Q 026028 144 -ILAFPCNQFGGQEPGSNPEIKEFACTRFKA-EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGK 221 (244)
Q Consensus 144 -vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~-~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~ 221 (244)
|++||.| +...+++|. +++++ +||+++|.+ ..+.+.|+.+.... ..|.++...+.+|||| +|+
T Consensus 82 ~V~gvS~D--------~~~~~~~~~-~~~~~~~f~lLsD~~---~~~a~~yGv~~~~~--~~G~g~~~~R~tfvId-dG~ 146 (182)
T 1xiy_A 82 DIYCITNN--------DIYVLKSWF-KSMDIKKIKYISDGN---SSFTDSMNMLVDKS--NFFMGMRPWRFVAIVE-NNI 146 (182)
T ss_dssp EEEEEESS--------CHHHHHHHH-HHTTCCSSEEEECTT---SHHHHHTTCEEECG--GGTCCEEECCEEEEEE-TTE
T ss_pred EEEEEeCC--------CHHHHHHHH-HHcCCCCceEEEeCc---hHHHHHhCCceecc--ccCCCCceEEEEEEEc-CCE
Confidence 9999988 899999998 77788 699996633 45677787653211 0111122347899999 999
Q ss_pred EEEEcCC
Q 026028 222 VIERYPP 228 (244)
Q Consensus 222 I~~~~~g 228 (244)
|++.+..
T Consensus 147 V~~~~v~ 153 (182)
T 1xiy_A 147 LVKMFQE 153 (182)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9998754
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.72 E-value=1.4e-17 Score=123.03 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=86.4
Q ss_pred cccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEe--cCCCCCCCCCChHHHH
Q 026028 87 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFP--CNQFGGQEPGSNPEIK 164 (244)
Q Consensus 87 ~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs--~D~~~~~~~~~~~~~~ 164 (244)
.+++++..+.+|+.......+||++||+||++||++|+.+.+.+.+++++++ .++.++.|+ +| . ..
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d--------~---~~ 72 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEE--------K---NI 72 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSS--------H---HH
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCC--------c---hH
Confidence 4566666666666555566689999999999999999999999999999997 459999998 54 1 22
Q ss_pred HHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 165 EFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 165 ~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+.+ ++++ |..+|+++++|++|+++.++.|..+.+++. .|++++.
T Consensus 73 ~~~-~~~~----------------------------------v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 73 DLA-YKYD----------------------------------ANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGV 117 (126)
T ss_dssp HHH-HHTT----------------------------------CCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCC
T ss_pred HHH-HHcC----------------------------------CcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 333 3433 233499999999999999999998888888 8887764
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.72 E-value=1.7e-18 Score=129.72 Aligned_cols=116 Identities=14% Similarity=0.134 Sum_probs=87.3
Q ss_pred cccCCcccceE-EEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 82 AATEKSLYDFT-VKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 82 ~~~g~~~pdf~-l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
...|..+|+|+ +.+.++....+++.+||++||+||++||++|+.+.+.+ .+++++++ ++.++.|++|.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~------ 75 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA------ 75 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT------
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC------
Confidence 34678899998 66667767778888899999999999999999999998 89998886 48999998862
Q ss_pred CChHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEE--EEcCCCCChhhH
Q 026028 158 GSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVI--ERYPPTTSPFQI 235 (244)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~--~~~~g~~~~~~l 235 (244)
..+...+.+ ++|+ |.++|+++++|++|+++ .++.|..+.+++
T Consensus 76 -~~~~~~~l~-~~~~----------------------------------v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l 119 (134)
T 2fwh_A 76 -NDAQDVALL-KHLN----------------------------------VLGLPTILFFDGQGQEHPQARVTGFMDAETF 119 (134)
T ss_dssp -CCHHHHHHH-HHTT----------------------------------CCSSSEEEEECTTSCBCGGGCBCSCCCHHHH
T ss_pred -CcchHHHHH-HHcC----------------------------------CCCCCEEEEECCCCCEeeeeeeeeccCHHHH
Confidence 223444444 4443 23349999999999998 789999988888
Q ss_pred H-HHHHH
Q 026028 236 E-DIQKL 241 (244)
Q Consensus 236 ~-~i~~l 241 (244)
+ .|+++
T Consensus 120 ~~~l~~~ 126 (134)
T 2fwh_A 120 SAHLRDR 126 (134)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 8 77653
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.69 E-value=8.3e-17 Score=121.12 Aligned_cols=105 Identities=18% Similarity=0.215 Sum_probs=86.2
Q ss_pred EEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhc
Q 026028 92 TVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRF 171 (244)
Q Consensus 92 ~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~ 171 (244)
.+.+.+|....+++++||++||+||++||++|+.+.|.+.+++++|+++ +.++.|++| ... +.+ ++|
T Consensus 35 ~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~--------~~~---~~~-~~~ 101 (141)
T 3hxs_A 35 KIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVD--------KEP---ELA-RDF 101 (141)
T ss_dssp HTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCH---HHH-HHT
T ss_pred HhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECC--------CCH---HHH-HHc
Confidence 4567788889999999999999999999999999999999999999865 999999887 221 233 343
Q ss_pred CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHhC
Q 026028 172 KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVVA 244 (244)
Q Consensus 172 ~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~~ 244 (244)
+ |.++|+++++|++|+++ ++.|..+.+++. .|+++|++
T Consensus 102 ~----------------------------------v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 102 G----------------------------------IQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp T----------------------------------CCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC-
T ss_pred C----------------------------------CCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHcc
Confidence 3 23349999999999987 788988999999 99888753
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.67 E-value=6.9e-17 Score=123.94 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=84.0
Q ss_pred cCCcccceEEEcCCCCeeecCCcCCCEEEEEEe-cCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecCCCCCCCCCC
Q 026028 84 TEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNV-ASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCNQFGGQEPGS 159 (244)
Q Consensus 84 ~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~-~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~ 159 (244)
.+...+++ +..|+.+++.+.+||++||+|| ++||++|+.+.|.| .++.+.+. .++.++.|+.|..
T Consensus 26 ~~~~~~~~---~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~------- 94 (154)
T 2ju5_A 26 IAAANLQW---ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQK------- 94 (154)
T ss_dssp SCCCCCCE---ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSS-------
T ss_pred cccCCCCC---CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCccc-------
Confidence 44455566 4457778888889999999999 99999999999999 77766554 3489999987621
Q ss_pred hHHHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC--ChhhHH-
Q 026028 160 NPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT--SPFQIE- 236 (244)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~--~~~~l~- 236 (244)
. ++++++. |.+ ....+.|+ |..+|+++|+|++|+++.++ |.. +.+++.
T Consensus 95 ~-----------~~~~~~~---~~~-~~l~~~~~-------------v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~ 145 (154)
T 2ju5_A 95 N-----------HQPEEQR---QKN-QELKAQYK-------------VTGFPELVFIDAEGKQLARM-GFEPGGGAAYVS 145 (154)
T ss_dssp C-----------CCCHHHH---HHH-HHHHHHTT-------------CCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHH
T ss_pred c-----------CCChhhH---hhH-HHHHHHcC-------------CCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHH
Confidence 1 0111110 000 00111111 44559999999999999999 988 778888
Q ss_pred HHHHHHhC
Q 026028 237 DIQKLVVA 244 (244)
Q Consensus 237 ~i~~lL~~ 244 (244)
.|++++++
T Consensus 146 ~l~~~l~~ 153 (154)
T 2ju5_A 146 KVKSALKL 153 (154)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 88888763
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.64 E-value=6e-16 Score=114.74 Aligned_cols=106 Identities=19% Similarity=0.203 Sum_probs=79.8
Q ss_pred cCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHH
Q 026028 84 TEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI 163 (244)
Q Consensus 84 ~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~ 163 (244)
...++|+++ +.+++.++....+||++||+||++||++|+.+.|.+.++++++++ ++.++.|++| ..
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d--------~~--- 85 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLD--------KN--- 85 (128)
T ss_dssp ------CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGG--------GC---
T ss_pred HhccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECC--------CC---
Confidence 344567766 556667777778999999999999999999999999999999985 4999999887 22
Q ss_pred HHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHH
Q 026028 164 KEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQ 239 (244)
Q Consensus 164 ~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~ 239 (244)
.+.+ ++++ |.++|+++++ ++|+++.++.|..+.++++ .|+
T Consensus 86 ~~l~-~~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 126 (128)
T 3ul3_B 86 ESLA-RKFS----------------------------------VKSLPTIILL-KNKTMLARKDHFVSSNDLIALIK 126 (128)
T ss_dssp HHHH-HHTT----------------------------------CCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHT
T ss_pred HHHH-HHcC----------------------------------CCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHH
Confidence 2333 3433 2334999999 7999999999988888777 554
No 111
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.60 E-value=2.1e-15 Score=114.52 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=90.9
Q ss_pred ccCCcccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHH
Q 026028 83 ATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 162 (244)
Q Consensus 83 ~~g~~~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~ 162 (244)
..|.++++..+.+++++.+.....+||++||+||++||++|+.+.+.+++++++++++ +.++.|++| ...
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~--------~~~- 99 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTE--------AEP- 99 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCH-
T ss_pred hcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECc--------CCH-
Confidence 3577788888888888876654467899999999999999999999999999999765 999999876 222
Q ss_pred HHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHH
Q 026028 163 IKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 163 ~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
+.+ ++|+ |..+|+++++ ++|+++.++.|..+.+++. .|+++
T Consensus 100 --~l~-~~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 100 --ALS-TRFR----------------------------------IRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp --HHH-HHTT----------------------------------CCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred --HHH-HHCC----------------------------------CCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHH
Confidence 233 3433 2333988888 6999999999999999999 99988
Q ss_pred Hh
Q 026028 242 VV 243 (244)
Q Consensus 242 L~ 243 (244)
++
T Consensus 142 l~ 143 (148)
T 3p2a_A 142 LS 143 (148)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 112
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.60 E-value=1.6e-15 Score=112.88 Aligned_cols=96 Identities=17% Similarity=0.073 Sum_probs=73.2
Q ss_pred cCCCEEEEEEecCCCCCCHHhHHHHH--HHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 106 FKGKVLLIVNVASRCGLTPSNYSELS--HLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 106 ~~gk~vll~F~~~~C~~C~~~~~~l~--~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.+||++||+||++||++|+.+.|.|. ++.+++++. +.++.|+++. .+...+.+ ++|++.+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~-~~~~~vd~~~--------~~~~~~l~-~~~~v~~~------- 89 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH-FEVVKIDVGN--------FDRNLELS-QAYGDPIQ------- 89 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH-CEEEEEECTT--------TTSSHHHH-HHTTCGGG-------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC-EEEEEEeCCc--------ccchHHHH-HHhCCccC-------
Confidence 46899999999999999999999999 999998754 9999998841 11123333 45443211
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC-------CCChhhHH-HHHHHH
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP-------TTSPFQIE-DIQKLV 242 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g-------~~~~~~l~-~i~~lL 242 (244)
.++|+++++|++|+++.++.| ..+.++++ .|+++.
T Consensus 90 ------------------------~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 90 ------------------------DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp ------------------------GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred ------------------------CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 233999999999999999988 56777787 777664
No 113
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.58 E-value=1.9e-16 Score=123.32 Aligned_cols=121 Identities=7% Similarity=0.027 Sum_probs=72.8
Q ss_pred eecCCcCCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcce
Q 026028 101 VPLSKFKGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPI 177 (244)
Q Consensus 101 v~L~~~~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~ 177 (244)
+.+.+.+||+|||+||++||++|+.+.+.+ .++++.+++ ++.++.|++|. ..++.+............
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~--------~~~~~~~~~~~~~~~~~~ 110 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN--------KTPLTEPVKIMENGTERT 110 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC--------CCEEEEEEEEEETTEEEE
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc--------ccccchhhhhhhcchhhh
Confidence 444556799999999999999999864444 555555554 59999999872 111000000000000000
Q ss_pred eeecCCCCCCchhhHHHh-hhccCCCcCCccccceeEEEECCCCcEEEEcCCCCC-hhhHH-HHHHHHh
Q 026028 178 FDKVDVNGPNTAPVYQFL-KSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTS-PFQIE-DIQKLVV 243 (244)
Q Consensus 178 l~d~d~~~~~~~~~~~~~-~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~-~~~l~-~i~~lL~ 243 (244)
+. ......+.+ .... ++.++|+++|||++|+++.++.|..+ .+++. .|+++|+
T Consensus 111 ~~-------~~~~~~~~~~~~~~------~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 111 LR-------TVGDKWSYLQRVKF------GANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EE-------EHHHHHHHHHHHHH------SCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hh-------hhhhhhhHHHHHHc------CCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 00 000000000 0000 25666999999999999999999998 88888 8888775
No 114
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.53 E-value=7.7e-15 Score=106.93 Aligned_cols=89 Identities=20% Similarity=0.263 Sum_probs=70.8
Q ss_pred CCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 104 SKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 104 ~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.+.+||++||+||++||++|+.+.|.+.+++++|++ +.++.|++| .. .+.+ ++|+
T Consensus 27 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d--------~~---~~l~-~~~~----------- 81 (116)
T 3qfa_C 27 DAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVD--------DC---QDVA-SECE----------- 81 (116)
T ss_dssp HHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETT--------TT---HHHH-HHTT-----------
T ss_pred HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC--------CC---HHHH-HHcC-----------
Confidence 334789999999999999999999999999999866 899999887 22 2233 3433
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|...|+++++ ++|+++.++.|. +.++++ .|+++|
T Consensus 82 -----------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 82 -----------------------VKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp -----------------------CCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred -----------------------CccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 2334988887 899999999998 888888 888764
No 115
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=1.1e-14 Score=107.78 Aligned_cols=99 Identities=14% Similarity=0.193 Sum_probs=74.5
Q ss_pred eeecCCcCCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcc
Q 026028 100 DVPLSKFKGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFP 176 (244)
Q Consensus 100 ~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p 176 (244)
.+.+++.+||++||+||++||++|+.+.+.+ .++.+.++. ++.++.|.+| . +...+.+ ++++
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~--------~-~~~~~~~-~~~~---- 83 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDME--------K-GEGVELR-KKYG---- 83 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSS--------S-TTHHHHH-HHTT----
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecC--------C-cchHHHH-HHcC----
Confidence 3455556799999999999999999999999 666666544 4788888765 1 1122333 4433
Q ss_pred eeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 177 IFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 177 ~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++|++|+++.++.|..+.+++. .|++++.
T Consensus 84 ------------------------------v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 84 ------------------------------VHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp ------------------------------CCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHS
T ss_pred ------------------------------CCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHH
Confidence 233499999999999999999998888888 8888764
No 116
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.52 E-value=4e-14 Score=101.17 Aligned_cols=89 Identities=17% Similarity=0.195 Sum_probs=72.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.++++.++++++ +.++.|++|. .. +.+ ++++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~~~-------------- 71 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTA-PKYG-------------- 71 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CT----THH-HHTT--------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CH----HHH-HHcC--------------
Confidence 5789999999999999999999999999999764 9999998872 11 122 3322
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+..+|+++++ ++|+++.++.|..+.+++. .|+++|+
T Consensus 72 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 72 --------------------IRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred --------------------CcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 3334999999 8999999999998888898 8888763
No 117
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.52 E-value=1.6e-14 Score=104.37 Aligned_cols=88 Identities=18% Similarity=0.200 Sum_probs=71.3
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...+.+.++++++++ ++.++.|++|. .. +.+ ++++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------~~----~l~-~~~~-------------- 68 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------NQ----ETA-GKYG-------------- 68 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------CC----SHH-HHTT--------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------CH----HHH-HHcC--------------
Confidence 789999999999999999999999999999986 49999999872 11 122 2322
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|..+|+++++ ++|+++.++.|..+.++++ .|++++
T Consensus 69 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~ 104 (112)
T 2voc_A 69 --------------------VMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHL 104 (112)
T ss_dssp --------------------CCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTS
T ss_pred --------------------CCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3344999999 9999999999999888888 777654
No 118
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.52 E-value=1.6e-14 Score=103.14 Aligned_cols=89 Identities=17% Similarity=0.219 Sum_probs=72.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+|+++||+||++||++|+...+.+.++.++++++ +.++.|++| ... +.+ ++++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~--------~~~---~~~-~~~~-------------- 72 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVD--------ENQ---KIA-DKYS-------------- 72 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEccc--------cCH---HHH-HhcC--------------
Confidence 5899999999999999999999999999999864 899999876 222 223 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|..+.+++. .|+++|+
T Consensus 73 --------------------i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 73 --------------------VLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred --------------------cccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 2334999999 9999999999999999999 8888764
No 119
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.52 E-value=2.7e-14 Score=102.49 Aligned_cols=87 Identities=15% Similarity=0.187 Sum_probs=66.3
Q ss_pred CCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 104 SKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 104 ~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.+.++|+|||+||++||++|+...|.+.++.+++++ +.++.|++| .. .+.+ ++|+
T Consensus 16 ~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d--------~~---~~l~-~~~~----------- 70 (105)
T 3zzx_A 16 NEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVD--------EC---EDIA-QDNQ----------- 70 (105)
T ss_dssp HHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETT--------TC---HHHH-HHTT-----------
T ss_pred HhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecc--------cC---HHHH-HHcC-----------
Confidence 344679999999999999999999999999998864 788888876 22 2233 4433
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHH
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
|.+.|+++++ ++|+++.++.|. +++++. .|++
T Consensus 71 -----------------------V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 71 -----------------------IACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp -----------------------CCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred -----------------------CCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 3344986666 899999999995 677776 6654
No 120
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.51 E-value=1.2e-13 Score=102.13 Aligned_cols=90 Identities=13% Similarity=0.074 Sum_probs=72.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.+|++||+||++||++|+.+.|.+.++.+++++. +.++.|++| ... +.+ ++++
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~--------~~~---~l~-~~~~-------------- 86 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNAD--------KHQ---SLG-GQYG-------------- 86 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETT--------TCH---HHH-HHHT--------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCC--------CCH---HHH-HHcC--------------
Confidence 4789999999999999999999999999999875 899999876 222 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|++++++++|+++.++.|..+.+++. .|.+.++
T Consensus 87 --------------------v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 87 --------------------VQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp --------------------CCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred --------------------CCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 233499999999998778899988888888 7777664
No 121
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.51 E-value=4.5e-14 Score=105.68 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=72.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.|.+++++++++ +.++.|++| ... +.+ ++|+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~--------~~~---~l~-~~~~-------------- 89 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTE--------KEQ---ELA-GAFG-------------- 89 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCC--------CCH---HHH-HHcC--------------
Confidence 4689999999999999999999999999999764 999999887 221 233 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++|++|+++ ++.|..+.++++ .|++++.
T Consensus 90 --------------------v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~ 126 (136)
T 2l5l_A 90 --------------------IRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLL 126 (136)
T ss_dssp --------------------CCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHT
T ss_pred --------------------CCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhh
Confidence 23349999999999998 678888888998 8888764
No 122
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.50 E-value=5.5e-14 Score=101.14 Aligned_cols=90 Identities=20% Similarity=0.251 Sum_probs=68.9
Q ss_pred CCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 104 SKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 104 ~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.+.+||++||+||++||++|+.+.|.++++++++++ +.++.|++|. .. .+.+ ++++
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~-------~~---~~~~-~~~~----------- 75 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------EN---KTLA-KELG----------- 75 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TT---HHHH-HHHC-----------
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCc-------ch---HHHH-HHcC-----------
Confidence 344689999999999999999999999999999864 8999998761 11 1222 3333
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|.++|+ ++++++|+++.++.|.. .+++. .|++++
T Consensus 76 -----------------------v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 76 -----------------------IRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp -----------------------CSBSSE-EEEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred -----------------------CCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 233498 67789999999998874 77788 887765
No 123
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.50 E-value=1.1e-14 Score=103.67 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=70.8
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.++++.++++++ +.++.|++| ... +.+ ++++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~--------~~~---~~~-~~~~-------------- 68 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVD--------ENP---ETT-SQFG-------------- 68 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECc--------CCH---HHH-HHcC--------------
Confidence 5789999999999999999999999999999765 999999887 221 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+.+.|+++++ ++|+++.++.|..+.+++. .|+++|
T Consensus 69 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 69 --------------------IMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred --------------------CccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 2334999999 8999999999998888887 777665
No 124
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.50 E-value=6.9e-14 Score=103.74 Aligned_cols=89 Identities=18% Similarity=0.209 Sum_probs=72.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...+.+++++++++++ +.++.|++|. .. +.+ ++
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 89 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTA-PK---------------- 89 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC----TTS-GG----------------
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHH-HH----------------
Confidence 5789999999999999999999999999999765 9999998872 10 111 11
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|+ |..+|+++++ ++|+++.++.|..+.+++. .|+++|+
T Consensus 90 -----~~-------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 90 -----YG-------------IRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp -----GT-------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -----cC-------------CCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 11 4445999999 9999999999999888998 8888774
No 125
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.50 E-value=6.8e-15 Score=109.95 Aligned_cols=102 Identities=12% Similarity=0.112 Sum_probs=73.1
Q ss_pred EEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhc
Q 026028 92 TVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRF 171 (244)
Q Consensus 92 ~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~ 171 (244)
++.+.++-...+++.+||++||+||++||++|+.+.|.++++.+++ ++.++.|.+| .. .+.+ ++|
T Consensus 24 ~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~--------~~---~~l~-~~~ 88 (133)
T 3cxg_A 24 ELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVD--------IH---PKLN-DQH 88 (133)
T ss_dssp ECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETT--------TC---HHHH-HHT
T ss_pred EecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEecc--------ch---HHHH-Hhc
Confidence 3444344334456778999999999999999999999999988776 4888888876 22 2222 333
Q ss_pred CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEE-CCCCc--EEEEcCCCCChhhHH-HHHHHHh
Q 026028 172 KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLV-DKNGK--VIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 172 ~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lI-D~~G~--I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+ |..+|+++++ |++|+ ++.++.|. +.++++ .|++++.
T Consensus 89 ~----------------------------------v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 89 N----------------------------------IKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp T----------------------------------CCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred C----------------------------------CCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 3 2334999988 45666 99999997 788888 8888764
No 126
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.50 E-value=3.6e-14 Score=100.84 Aligned_cols=88 Identities=18% Similarity=0.256 Sum_probs=70.8
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
++|++||+||++||++|+...+.+.++.++++++ +.++.|++| ... +.+ ++++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~--------~~~---~~~-~~~~-------------- 70 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVD--------ENP---STA-AKYE-------------- 70 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECC--------cCH---HHH-HhCC--------------
Confidence 7899999999999999999999999999999876 999999887 222 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+...|++++++ +|+++.++.|..+.+++. .|+++|
T Consensus 71 --------------------v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 71 --------------------VMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp --------------------CCSBSEEEEEE-TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred --------------------CcccCEEEEEe-CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 23349888884 999999999998888888 777653
No 127
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.50 E-value=9.4e-14 Score=99.01 Aligned_cols=89 Identities=16% Similarity=0.224 Sum_probs=71.1
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.++++.++++++ +.++.|++| ... +.+ ++++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~--------~~~---~~~-~~~~-------------- 70 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTD--------ESP---NVA-SEYG-------------- 70 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCH---HHH-HHHT--------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECC--------CCH---HHH-HHCC--------------
Confidence 4789999999999999999999999999999765 999999877 221 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+...|+++++ ++|+++.++.|..+.++++ .|+++|+
T Consensus 71 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 71 --------------------IRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp --------------------CCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred --------------------CCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 2233987766 8999999999999888888 8888763
No 128
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.49 E-value=1.4e-13 Score=99.26 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=78.1
Q ss_pred EcCCCCeeecC-CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcC
Q 026028 94 KDIDGKDVPLS-KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFK 172 (244)
Q Consensus 94 ~~~~g~~v~L~-~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 172 (244)
.+++++.+... .-+|+++||.||++||++|+...+.+.++.++++++ +.++.|++| ... +.+ ++++
T Consensus 10 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~--------~~~---~~~-~~~~ 76 (115)
T 1thx_A 10 ITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEID--------PNP---TTV-KKYK 76 (115)
T ss_dssp EECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEEST--------TCH---HHH-HHTT
T ss_pred EEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcC--------CCH---HHH-HHcC
Confidence 34444444322 125789999999999999999999999999999865 999999987 221 222 3333
Q ss_pred CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 173 AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 173 ~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|...|+++++ ++|+++.++.|..+.+++. .|++++.
T Consensus 77 ----------------------------------v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 77 ----------------------------------VEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp ----------------------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ----------------------------------CCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 2333999999 9999999999998889999 8988875
No 129
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.5e-13 Score=98.96 Aligned_cols=89 Identities=9% Similarity=0.127 Sum_probs=67.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...|.+.++.++++..++.++.|++| ... +.+ ++++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~--------~~~---~~~-~~~~-------------- 73 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD--------ENS---EIS-ELFE-------------- 73 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc--------cCH---HHH-HHcC--------------
Confidence 47899999999999999999999999999976667999999887 221 223 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|.. +++++ .|++++.
T Consensus 74 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 74 --------------------ISAVPYFIII-HKGTILKELSGAD-PKEYVSLLEDCKN 109 (112)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEECSCC-HHHHHHHHHHHHH
T ss_pred --------------------CCcccEEEEE-ECCEEEEEecCCC-HHHHHHHHHHHHh
Confidence 2334988777 7999999999974 55688 8888764
No 130
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.49 E-value=6.5e-14 Score=100.77 Aligned_cols=89 Identities=19% Similarity=0.265 Sum_probs=71.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.+.++.++++++ +.++.|++| ... +.+ ++++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~--------~~~---~~~-~~~~-------------- 74 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNID--------ENP---GTA-AKYG-------------- 74 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcC--------CCH---HHH-HhCC--------------
Confidence 4789999999999999999999999999999765 999999887 221 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|..+.+++. .|+++|+
T Consensus 75 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 75 --------------------VMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred --------------------CCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 2333986666 8999999999999888998 8988875
No 131
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.49 E-value=2.6e-14 Score=109.02 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=70.5
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
++|++||+||++||++|+.+.|.|.+++++|+++ +.++.|++|. .. +++ ++|+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~--------~~---~l~-~~~~-------------- 74 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ--------TA---VYT-QYFD-------------- 74 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT--------CC---HHH-HHTT--------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc--------CH---HHH-HHcC--------------
Confidence 4799999999999999999999999999999765 8999998872 11 233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEE---------EEcCC-CCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVI---------ERYPP-TTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~---------~~~~g-~~~~~~l~-~i~~lL~ 243 (244)
|...|+++ ++++|+++ .++.| ..+.+++. .|+++++
T Consensus 75 --------------------v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 75 --------------------ISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp --------------------CCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred --------------------CCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 23339888 77899999 88888 77888888 8887753
No 132
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.49 E-value=6.4e-14 Score=100.79 Aligned_cols=86 Identities=17% Similarity=0.239 Sum_probs=68.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+.+.|.+.++++++++ +.++.|.+| .. .+.+ ++++
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~--------~~---~~l~-~~~~-------------- 74 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVD--------EL---GDVA-QKNE-------------- 74 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT--------TC---HHHH-HHTT--------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECC--------CC---HHHH-HHcC--------------
Confidence 589999999999999999999999999999865 899999876 22 2233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|..+|++++++ +|+++.++.|. ++++++ .|++++
T Consensus 75 --------------------v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 75 --------------------VSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp --------------------CCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred --------------------CCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 23349999997 99999999998 567888 777764
No 133
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.49 E-value=4.9e-14 Score=99.52 Aligned_cols=89 Identities=18% Similarity=0.223 Sum_probs=72.6
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||.||++||++|+...+.+.++.+++++ +.++.|++| ... +.. ++++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~--------~~~---~~~-~~~~-------------- 66 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSD--------ENP---DIA-ARYG-------------- 66 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECC--------CCH---HHH-HhCC--------------
Confidence 578999999999999999999999999999876 899999887 221 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHhC
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVVA 244 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~~ 244 (244)
+...|+++++ ++|+++.++.|..+.+++. .|++++++
T Consensus 67 --------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 104 (104)
T 2e0q_A 67 --------------------VMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLGE 104 (104)
T ss_dssp --------------------CCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred --------------------ccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhcC
Confidence 2233999888 8999999999998888999 99988864
No 134
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.1e-13 Score=102.52 Aligned_cols=90 Identities=17% Similarity=0.151 Sum_probs=71.5
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc---CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT---QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~---~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.+|++||+||++||++|+.+.|.+.++++++++ .++.++.|++|. .. +++ ++++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--------~~---~l~-~~~~----------- 80 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV--------NQ---VLA-SRYG----------- 80 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT--------CC---HHH-HHHT-----------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC--------CH---HHH-HhCC-----------
Confidence 478999999999999999999999999999973 349999998762 11 222 2322
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++++ |+++.++.|..+.+++. .|+++++
T Consensus 81 -----------------------v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 81 -----------------------IRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp -----------------------CCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred -----------------------CCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhh
Confidence 333499999987 99999999998898888 8888764
No 135
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.48 E-value=9.5e-14 Score=101.42 Aligned_cols=88 Identities=17% Similarity=0.244 Sum_probs=71.8
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.|++++++++++ +.++.|++| ... +++ ++++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d--------~~~---~l~-~~~~-------------- 82 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDID--------DHT---DLA-IEYE-------------- 82 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETT--------TTH---HHH-HHTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCC--------CCH---HHH-HHcC--------------
Confidence 5789999999999999999999999999998764 999999887 221 233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|..+|+++++ ++|+++.++.|..+.+++. .|++++
T Consensus 83 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 83 --------------------VSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred --------------------CCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 2333999888 8999999999998888898 888876
No 136
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=8.4e-14 Score=104.29 Aligned_cols=103 Identities=15% Similarity=0.171 Sum_probs=77.0
Q ss_pred EEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCC--eEEEEEecCCCCCCCCCChHHHHHHHHHh
Q 026028 93 VKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQG--FEILAFPCNQFGGQEPGSNPEIKEFACTR 170 (244)
Q Consensus 93 l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~ 170 (244)
+.+++++.+...-.++|++||+||++||++|+.+.+.|.++++++++.+ +.++.|.+| .. .+.+ ++
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--------~~---~~~~-~~ 86 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT--------SA---SMLA-SK 86 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT--------TC---HHHH-HH
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc--------cc---HHHH-HH
Confidence 4445555544322357899999999999999999999999999998764 788888765 11 2233 34
Q ss_pred cCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 171 FKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 171 ~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|+ |..+|+++++ ++|+ +.++.|..+.+++. .|++++.
T Consensus 87 ~~----------------------------------v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~ 124 (140)
T 2dj1_A 87 FD----------------------------------VSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQ 124 (140)
T ss_dssp TT----------------------------------CCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHS
T ss_pred CC----------------------------------CCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcC
Confidence 33 2334999999 7899 67889999999998 8888874
No 137
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.48 E-value=5.5e-14 Score=107.82 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=73.1
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.|+++||+||++||++|+...|.|++++++++++ +.++.|++|. .. +.. ++|+
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~--------~~---~l~-~~~~-------------- 115 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA--------HP---AVA-GRHR-------------- 115 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT--------ST---HHH-HHTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc--------cH---HHH-HHcC--------------
Confidence 5789999999999999999999999999999865 9999998872 11 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|..+.++++ .|+++++
T Consensus 116 --------------------i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 116 --------------------IQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred --------------------CCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 3334998888 7999999999999999999 9988875
No 138
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.22 E-value=3.1e-15 Score=110.89 Aligned_cols=101 Identities=13% Similarity=0.223 Sum_probs=76.5
Q ss_pred CCeeecCCcCCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCC
Q 026028 98 GKDVPLSKFKGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAE 174 (244)
Q Consensus 98 g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~ 174 (244)
++.+++...+||++||+||++||++|+.+.+.+ .++.+.+++ ++.++.|++| .. +..+++ ++
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~--------~~-~~~~~~-~~---- 73 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVD--------TP-EGQELA-RR---- 73 (130)
Confidence 566777778899999999999999999999999 888888765 3788888764 11 111121 12
Q ss_pred cceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECC-CCcE--EEEcCCCCChhhHH-HHHHHHh
Q 026028 175 FPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDK-NGKV--IERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 175 ~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~-~G~I--~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|+ |..+|+++++|+ +|++ +.++.|..+.+++. .|+++++
T Consensus 74 -----------------~~-------------v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 74 -----------------YR-------------VPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 11 344499999995 6999 88999988888888 8888775
No 139
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.48 E-value=5.8e-14 Score=100.16 Aligned_cols=87 Identities=23% Similarity=0.267 Sum_probs=67.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
++|++||+||++||++|+...|.++++.++++ ++.++.|++|. .. +.+ ++|+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~----~l~-~~~~-------------- 68 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQ----EIA-GRYA-------------- 68 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CH----HHH-HhcC--------------
Confidence 57899999999999999999999999999984 48999998872 11 122 2222
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|.+.|+++++ ++|+++.++.|..+.+++. .|++++
T Consensus 69 --------------------v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 69 --------------------VFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp ---------------------CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred --------------------CCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 3344999999 5999999999999888888 887765
No 140
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.48 E-value=1.4e-13 Score=98.89 Aligned_cols=88 Identities=15% Similarity=0.100 Sum_probs=70.1
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCC
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPN 187 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~ 187 (244)
||++||+||++||++|+...+.|.++.+++++ ++.++.|++| ... +.+ ++++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~--------~~~---~~~-~~~~--------------- 75 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVD--------AVA---AVA-EAAG--------------- 75 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT--------TTH---HHH-HHHT---------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECC--------chH---HHH-HHcC---------------
Confidence 89999999999999999999999999999976 5999999876 222 222 3333
Q ss_pred chhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHhC
Q 026028 188 TAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVVA 244 (244)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~~ 244 (244)
|.+.|+++++ ++|+++.++.|. +++++. .|++++++
T Consensus 76 -------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~a 112 (112)
T 1ep7_A 76 -------------------ITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKHAAA 112 (112)
T ss_dssp -------------------CCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHCC
T ss_pred -------------------CCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHHhcC
Confidence 2334985555 899999999998 888888 99988763
No 141
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.48 E-value=2.2e-14 Score=104.94 Aligned_cols=110 Identities=16% Similarity=0.181 Sum_probs=77.5
Q ss_pred cCCcccceEEEcCCCCeeecCCc--CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChH
Q 026028 84 TEKSLYDFTVKDIDGKDVPLSKF--KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNP 161 (244)
Q Consensus 84 ~g~~~pdf~l~~~~g~~v~L~~~--~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~ 161 (244)
.|...+.+.+.+.++-.-.+.+. +||++||+||++||++|+...+.|+++.+++++ +.++.|++| ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~--------~~- 76 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVD--------EL- 76 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT--------TC-
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECC--------CC-
Confidence 45556666665543322222222 588999999999999999999999999999875 899999887 21
Q ss_pred HHHHHHHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHH
Q 026028 162 EIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
.+.. ++|+ |.++|+++++ ++|+++.++.|.. .++++ .|++
T Consensus 77 --~~~~-~~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 117 (122)
T 2vlu_A 77 --KPIA-EQFS----------------------------------VEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVGL 117 (122)
T ss_dssp --HHHH-HHTT----------------------------------CCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHH
T ss_pred --HHHH-HHcC----------------------------------CCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHHH
Confidence 1233 3433 2333986655 8999999999988 88888 8888
Q ss_pred HHh
Q 026028 241 LVV 243 (244)
Q Consensus 241 lL~ 243 (244)
+++
T Consensus 118 ~l~ 120 (122)
T 2vlu_A 118 HAA 120 (122)
T ss_dssp HHS
T ss_pred Hhc
Confidence 875
No 142
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.47 E-value=9.2e-14 Score=103.15 Aligned_cols=108 Identities=20% Similarity=0.143 Sum_probs=75.6
Q ss_pred ceEEEcCCCCeeecCCc-CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC-CeEEEEEecCCCCCCCCCChHHHHHHH
Q 026028 90 DFTVKDIDGKDVPLSKF-KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ-GFEILAFPCNQFGGQEPGSNPEIKEFA 167 (244)
Q Consensus 90 df~l~~~~g~~v~L~~~-~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vi~Vs~D~~~~~~~~~~~~~~~~~ 167 (244)
+-.+.+++++.+...-. ++|++||+||++||++|+.+.|.|.++++++++. ++.++.|.+|. .
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~--------~------- 70 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA--------N------- 70 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT--------S-------
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc--------C-------
Confidence 33455666665554333 4899999999999999999999999999999863 48888886651 0
Q ss_pred HHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEE-EEcC-CCCChhhHH-HHHHHHh
Q 026028 168 CTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVI-ERYP-PTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 168 ~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~-~~~~-g~~~~~~l~-~i~~lL~ 243 (244)
+.+ ...| .|..+|++++++++|++. ..+. |..+.+++. .|++++.
T Consensus 71 --------~~~----------~~~~-------------~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 71 --------DIT----------NDQY-------------KVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp --------CCC----------CSSC-------------CCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred --------HHH----------Hhhc-------------CCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 000 0011 145559999999877653 2466 557788888 8888764
No 143
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.47 E-value=4.3e-14 Score=103.17 Aligned_cols=102 Identities=17% Similarity=0.019 Sum_probs=77.5
Q ss_pred EEcCCCCeeecC-CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc----CCeEEEEEecCCCCCCCCCChHHHHHHH
Q 026028 93 VKDIDGKDVPLS-KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT----QGFEILAFPCNQFGGQEPGSNPEIKEFA 167 (244)
Q Consensus 93 l~~~~g~~v~L~-~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~----~~~~vi~Vs~D~~~~~~~~~~~~~~~~~ 167 (244)
+.+++++.+... ..++|++||+||++||++|+.+.|.+.++++++++ .++.++.|.+|. .
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~--------~------- 73 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA--------N------- 73 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT--------S-------
T ss_pred eEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc--------c-------
Confidence 455666665543 23689999999999999999999999999999986 258898888651 0
Q ss_pred HHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcE-EEEcCCCCChhhHH-HHHHHHh
Q 026028 168 CTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKV-IERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 168 ~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I-~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
. + .+ .|..+|++++++++|++ +.++.|..+.+++. .|++++.
T Consensus 74 ----~-----~--~~-----------------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 74 ----D-----V--PD-----------------------EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp ----C-----C--SS-----------------------CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred ----c-----c--cc-----------------------ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 0 0 00 04445999999998885 67888988888888 8887654
No 144
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.47 E-value=9.3e-14 Score=116.62 Aligned_cols=89 Identities=16% Similarity=0.228 Sum_probs=71.4
Q ss_pred cCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCC
Q 026028 106 FKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNG 185 (244)
Q Consensus 106 ~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~ 185 (244)
.+||+|||+||++||++|+.+.|.+.++.++++++ +.++.|++|. . .+.. ++|+
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~--------~---~~~~-~~~~------------- 77 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDA--------E---QMIA-AQFG------------- 77 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTT--------C---HHHH-HTTT-------------
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCcc--------C---HHHH-HHcC-------------
Confidence 35899999999999999999999999999999864 9999999872 2 2333 3433
Q ss_pred CCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 186 PNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|.++|+++++ ++|+++.++.|..+.+.+. .|+..+
T Consensus 78 ---------------------v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 78 ---------------------LRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp ---------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred ---------------------CCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 3344999988 7999999999998888887 776643
No 145
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.47 E-value=5.9e-14 Score=105.59 Aligned_cols=89 Identities=10% Similarity=0.116 Sum_probs=72.3
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.+|++||+||++||++|+...+.+.++.++++++ +.++.|.+| ... +.+ ++++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~--------~~~---~l~-~~~~-------------- 75 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIA--------TNP---WTA-EKYG-------------- 75 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETT--------TCH---HHH-HHHT--------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECC--------cCH---hHH-HHCC--------------
Confidence 4789999999999999999999999999999875 999999887 222 222 3332
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|..+.+++. .|+++++
T Consensus 76 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 76 --------------------VQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp --------------------CCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred --------------------CCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 3334987777 8999999999999999999 8888874
No 146
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.47 E-value=1.6e-13 Score=97.55 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=75.4
Q ss_pred EcCCCCeeecC-CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcC
Q 026028 94 KDIDGKDVPLS-KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFK 172 (244)
Q Consensus 94 ~~~~g~~v~L~-~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 172 (244)
..++++.+... .-.|+++||.||++||++|+...+.+.++.+++++ ++.++.|++|. .. +.+ ++++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~~-~~~~ 71 (107)
T 2i4a_A 5 LAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NP----ETP-NAYQ 71 (107)
T ss_dssp EECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CC----HHH-HHTT
T ss_pred eecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CH----HHH-HhcC
Confidence 34455444321 12578999999999999999999999999999986 49999998872 11 222 3333
Q ss_pred CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 173 AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 173 ~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|...|+++++ ++|+++.++.|..+.+++. .|++++
T Consensus 72 ----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 72 ----------------------------------VRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp ----------------------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred ----------------------------------CCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 2333999999 9999999999988888888 777653
No 147
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.47 E-value=4.8e-14 Score=105.63 Aligned_cols=93 Identities=16% Similarity=0.303 Sum_probs=72.9
Q ss_pred eecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeee
Q 026028 101 VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDK 180 (244)
Q Consensus 101 v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d 180 (244)
+.+.+.+||++||+||++||++|+.+.+.++++.++++ ++.++.|++| .. .+.+ ++|+
T Consensus 39 ~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~--------~~---~~~~-~~~~-------- 96 (139)
T 3d22_A 39 LSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVD--------EL---SDFS-ASWE-------- 96 (139)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TS---HHHH-HHTT--------
T ss_pred HHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCc--------cc---HHHH-HHcC--------
Confidence 34444579999999999999999999999999999984 4899999887 22 2233 3333
Q ss_pred cCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 181 VDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|.++|+++++ ++|+++.++.|. ++++++ .|+++++
T Consensus 97 --------------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 97 --------------------------IKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp --------------------------CCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred --------------------------CCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 3334987777 999999999998 788888 8888875
No 148
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.46 E-value=1.2e-13 Score=98.02 Aligned_cols=102 Identities=15% Similarity=0.175 Sum_probs=76.1
Q ss_pred EEcCCCCeeecCC-cCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhc
Q 026028 93 VKDIDGKDVPLSK-FKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRF 171 (244)
Q Consensus 93 l~~~~g~~v~L~~-~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~ 171 (244)
+.+++++.+...- -.+|++||.||++||++|+...+.++++.++++++ +.++.|++| .. .+.+ +++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~--------~~---~~~~-~~~ 68 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTD--------EA---PGIA-TQY 68 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TC---HHHH-HHT
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCc--------ch---HHHH-HhC
Confidence 3455565544322 24789999999999999999999999999999765 899999876 22 1233 343
Q ss_pred CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 172 KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 172 ~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
++ ...|+++++ ++|+++.++.|..+.+++. .|+++|
T Consensus 69 ~v----------------------------------~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 69 NI----------------------------------RSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp TC----------------------------------CSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred CC----------------------------------CcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 32 233986666 7999999999998888888 888764
No 149
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.46 E-value=1.1e-15 Score=118.38 Aligned_cols=111 Identities=13% Similarity=0.106 Sum_probs=77.1
Q ss_pred ccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHH
Q 026028 88 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFA 167 (244)
Q Consensus 88 ~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~ 167 (244)
.+++.+.+.+ +.+++...+||++||+||++||++|+.+.|.|.++.+.++. ++.++.|++|. ... ...
T Consensus 27 ~~~i~w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~--------~~~--~~~ 94 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLED--------EEE--PKD 94 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG--------GGS--CSC
T ss_pred cccccccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC--------Cch--HHH
Confidence 3445555544 45566667899999999999999999999999998766544 36778887761 110 000
Q ss_pred HHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC----------CChhhHH-
Q 026028 168 CTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT----------TSPFQIE- 236 (244)
Q Consensus 168 ~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~----------~~~~~l~- 236 (244)
..+++ .+..+|+++++|++|+++.++.|. .+.+++.
T Consensus 95 -~~~~~--------------------------------~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~ 141 (164)
T 1sen_A 95 -EDFSP--------------------------------DGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQ 141 (164)
T ss_dssp -GGGCT--------------------------------TCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHH
T ss_pred -HHhcc--------------------------------cCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHH
Confidence 11110 012349999999999999888885 5677777
Q ss_pred HHHHHHh
Q 026028 237 DIQKLVV 243 (244)
Q Consensus 237 ~i~~lL~ 243 (244)
.|+++++
T Consensus 142 ~l~~~l~ 148 (164)
T 1sen_A 142 GMKEAQE 148 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887764
No 150
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.46 E-value=1.4e-13 Score=101.41 Aligned_cols=87 Identities=16% Similarity=0.210 Sum_probs=68.5
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+.+.+.|+++.++++ ++.++.|++| .. .+.+ ++|+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d--------~~---~~l~-~~~~-------------- 88 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTD--------EL---KSVA-SDWA-------------- 88 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETT--------TS---HHHH-HHTT--------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECc--------cC---HHHH-HHcC--------------
Confidence 68999999999999999999999999999986 5999999876 22 2233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|. ++++++ .|+++|+
T Consensus 89 --------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 89 --------------------IQAMPTFMFL-KEGKILDKVVGA-KKDELQSTIAKHLA 124 (124)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHCC
T ss_pred --------------------CCccCEEEEE-ECCEEEEEEeCC-CHHHHHHHHHHhcC
Confidence 2233986666 899999999994 788888 8887763
No 151
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.46 E-value=2.5e-13 Score=103.25 Aligned_cols=89 Identities=8% Similarity=-0.007 Sum_probs=68.4
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.+++|||+|||+||++|+...|.|.++.++++++ +.|+-|.+|+. .+++ ++|+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~-----------~e~a-~~y~-------------- 92 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEV-----------PDFN-TMYE-------------- 92 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTC-----------CTTT-TTTT--------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCC-----------HHHH-HHcC--------------
Confidence 3579999999999999999999999999999765 88999998721 1122 3322
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEE--E-------EcCCCCC-hhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVI--E-------RYPPTTS-PFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~--~-------~~~g~~~-~~~l~-~i~~lL~ 243 (244)
|...|+++++ ++|+.+ . +..|..+ .++++ .|+++++
T Consensus 93 --------------------V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 93 --------------------LYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp --------------------CCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred --------------------CCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 3334887777 788887 5 7888876 77888 8887764
No 152
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.46 E-value=1.2e-13 Score=107.25 Aligned_cols=82 Identities=12% Similarity=0.050 Sum_probs=62.1
Q ss_pred ecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeec
Q 026028 102 PLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKV 181 (244)
Q Consensus 102 ~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~ 181 (244)
.+.+++||++||+||++|||+|+.+.|.|.+++++++ ++.++.|+.| +..+.+ ++|..
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d-----------~~~~~~-~~~~~-------- 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKG-----------RAEDDL-RQRLA-------- 105 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHH-----------HHHHHT-TTTTT--------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECC-----------CCHHHH-HHHHH--------
Confidence 4567789999999999999999999999999999875 4899999755 222332 22221
Q ss_pred CCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC
Q 026028 182 DVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP 228 (244)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g 228 (244)
. .+.++|+++++|++|+++.++.+
T Consensus 106 --~---------------------~v~~iPt~i~~~~~G~~~~~~g~ 129 (167)
T 1z6n_A 106 --L---------------------ERIAIPLVLVLDEEFNLLGRFVE 129 (167)
T ss_dssp --C---------------------SSCCSSEEEEECTTCCEEEEEES
T ss_pred --c---------------------CCCCcCeEEEECCCCCEEEEEcC
Confidence 0 13445999999999999988744
No 153
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=101.77 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=73.5
Q ss_pred EEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcC
Q 026028 93 VKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFK 172 (244)
Q Consensus 93 l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 172 (244)
+.+++++.+. ..+++ .+||+||++||++|+.+.|.+.++++++++.++.++.|++| ... +.+ ++|+
T Consensus 9 v~~l~~~~f~-~~~~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~--------~~~---~~~-~~~~ 74 (126)
T 1x5e_A 9 VRVITDENWR-ELLEG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT--------EQP---GLS-GRFI 74 (126)
T ss_dssp EEECCTTTHH-HHTSS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT--------TCH---HHH-HHTT
T ss_pred cEEecHHHHH-HHhCC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc--------CCH---HHH-HHcC
Confidence 3344444433 12344 48999999999999999999999999998767999999886 221 233 3433
Q ss_pred CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 173 AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 173 ~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|..+|+++++ ++|++ .++.|..+.+++. .|++++
T Consensus 75 ----------------------------------v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 75 ----------------------------------INALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp ----------------------------------CCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCG
T ss_pred ----------------------------------CcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHh
Confidence 2334999999 89995 7889988888888 887765
No 154
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.46 E-value=1.6e-13 Score=100.62 Aligned_cols=89 Identities=15% Similarity=0.173 Sum_probs=71.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...+.|+++.++++++++.++.|++| ... +++ ++++
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d--------~~~---~~~-~~~~-------------- 85 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD--------EQS---QIA-QEVG-------------- 85 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT--------TCH---HHH-HHHT--------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc--------CCH---HHH-HHcC--------------
Confidence 57899999999999999999999999999998877999999987 222 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|. ++++++ .|+++++
T Consensus 86 --------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 86 --------------------IRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred --------------------CCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 2233988777 699999999998 888888 8888763
No 155
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.45 E-value=2.7e-13 Score=97.12 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=72.9
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+++++||.||++||++|+...+.+.++.++++++ +.++.|++| ... +.+ ++++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~--------~~~---~l~-~~~~-------------- 73 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVE--------EEK---TLF-QRFS-------------- 73 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECC--------cCh---hHH-HhcC--------------
Confidence 5789999999999999999999999999999864 999999887 222 233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|...|+++++ ++|+++.++.|..+.+++. .|+++++
T Consensus 74 --------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 74 --------------------LKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp --------------------CCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred --------------------CCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 2333999888 7999999999999999999 9988875
No 156
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.44 E-value=1.4e-13 Score=97.62 Aligned_cols=88 Identities=20% Similarity=0.249 Sum_probs=70.1
Q ss_pred CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 105 KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 105 ~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
+.+||++||+||++||++|+...+.+.++.+++++ +.++.|+.| .. .+.. ++++
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~--------~~---~~~~-~~~~------------ 70 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVD--------DC---QDVA-SESE------------ 70 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETT--------TC---HHHH-HHTT------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhh--------hh---HHHH-HHcC------------
Confidence 34689999999999999999999999999999865 899999876 22 2222 3332
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+...|+++++ ++|+++.++.|. +.++++ .|+++|
T Consensus 71 ----------------------v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 71 ----------------------VKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp ----------------------CCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ----------------------CCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 2334999999 889999999998 888888 887764
No 157
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.44 E-value=5e-14 Score=113.23 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=83.5
Q ss_pred ccceEEEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHH
Q 026028 88 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFA 167 (244)
Q Consensus 88 ~pdf~l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~ 167 (244)
.++..+.+++++.+.....+|+++||+||++||++|+.+.|.+.++.+++++. +.++.|++| ... +.+
T Consensus 94 ~~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~--------~~~---~l~ 161 (210)
T 3apq_A 94 DDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCG--------DDR---MLC 161 (210)
T ss_dssp TTCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETT--------TCH---HHH
T ss_pred CCCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECC--------ccH---HHH
Confidence 34455566666655444457899999999999999999999999999999764 999999887 221 233
Q ss_pred HHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 168 CTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 168 ~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
++++ |.++|+++++ ++|+++.++.|..+.+++. .|++++.
T Consensus 162 -~~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 162 -RMKG----------------------------------VNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp -HHTT----------------------------------CCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred -HHcC----------------------------------CCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCc
Confidence 3433 2334998888 9999999999998999998 8888875
No 158
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.44 E-value=2.2e-13 Score=99.96 Aligned_cols=89 Identities=20% Similarity=0.246 Sum_probs=67.7
Q ss_pred CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 105 KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 105 ~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
+.+||++||+||++||++|+...|.+++++++++ ++.++.|++|. .. .+.+ ++++
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~-------~~---~~~~-~~~~------------ 88 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ-------EN---KTLA-KELG------------ 88 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------TT---HHHH-HHHC------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc-------ch---HHHH-HHcC------------
Confidence 3468999999999999999999999999999986 48999998751 11 2222 3333
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|.+.|+ ++++++|+++.++.|.. .+++. .|++++
T Consensus 89 ----------------------v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 89 ----------------------IRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp ----------------------CSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred ----------------------CCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 233498 56669999999998876 77787 787765
No 159
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.44 E-value=6e-13 Score=99.34 Aligned_cols=87 Identities=9% Similarity=0.065 Sum_probs=72.2
Q ss_pred CEEEEEEecCCC--CCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 109 KVLLIVNVASRC--GLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 109 k~vll~F~~~~C--~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+++||+||++|| ++|+...|.|.++.++|+++ +.|+.|++| +..+.+ .+|+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvD-----------e~~~la-~~yg-------------- 86 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAE-----------AERGLM-ARFG-------------- 86 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGG-----------GHHHHH-HHHT--------------
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECC-----------CCHHHH-HHcC--------------
Confidence 499999999999 99999999999999999875 999999876 223444 4444
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.+..|..+.++++ .|+++++
T Consensus 87 --------------------V~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 87 --------------------VAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp --------------------CCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred --------------------CccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 3344988888 9999999999999998888 8888763
No 160
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.44 E-value=1.1e-13 Score=98.70 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=71.3
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.+.++.++++++ +.++.|++| ... +.. ++++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~--------~~~---~~~-~~~~-------------- 69 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVD--------ENP---KTA-MRYR-------------- 69 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECC--------CCH---hHH-HhCC--------------
Confidence 5789999999999999999999999999999864 999999887 221 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+...|+++++ ++|+++.++.|..+.+++. .|++++.
T Consensus 70 --------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 70 --------------------VMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred --------------------CCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 2233999999 8999999999998888888 8887764
No 161
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.44 E-value=6.5e-13 Score=95.45 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=69.6
Q ss_pred cCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCC
Q 026028 106 FKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNG 185 (244)
Q Consensus 106 ~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~ 185 (244)
.+||++||+||++||++|+...+.++++.++++ ++.++.|++| ... +.. ++++
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~--------~~~---~~~-~~~~------------- 76 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVD--------ELK---AVA-EEWN------------- 76 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETT--------TCH---HHH-HHHH-------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcc--------ccH---HHH-HhCC-------------
Confidence 358999999999999999999999999999986 5999999876 222 222 2222
Q ss_pred CCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHhC
Q 026028 186 PNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVVA 244 (244)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~~ 244 (244)
+...|+++++ ++|+++.++.| .+++++. .|++++++
T Consensus 77 ---------------------v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~~ 113 (113)
T 1ti3_A 77 ---------------------VEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHATA 113 (113)
T ss_dssp ---------------------CSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHHC
T ss_pred ---------------------CCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhcC
Confidence 2233988777 79999999988 5778888 99888763
No 162
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.42 E-value=7.8e-13 Score=99.08 Aligned_cols=90 Identities=8% Similarity=0.032 Sum_probs=73.4
Q ss_pred CCCEEEEEEecCC--CCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 107 KGKVLLIVNVASR--CGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 107 ~gk~vll~F~~~~--C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
.+++|||+||++| |++|+...|.|.++.++|+++.+.|+.|++| +..+.+ .+|+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD-----------e~~~lA-~~yg------------ 88 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE-----------QSEAIG-DRFG------------ 88 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH-----------HHHHHH-HHHT------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC-----------CCHHHH-HHcC------------
Confidence 4568999999999 9999999999999999997644899999665 344554 4544
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.+..|..+.++++ .|+++|+
T Consensus 89 ----------------------V~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 89 ----------------------AFRFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp ----------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ----------------------CccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 3444988777 9999999999999988998 9988874
No 163
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.42 E-value=4.5e-13 Score=98.97 Aligned_cols=87 Identities=10% Similarity=0.193 Sum_probs=69.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
++|++||+||++||++|+...|.|.++.++++ ++.++.|++| ... +.+ ++|+
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d--------~~~---~l~-~~~~-------------- 87 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDAD--------NNS---EIV-SKCR-------------- 87 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECC--------CCH---HHH-HHcC--------------
Confidence 67899999999999999999999999999984 4999999887 221 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.| .++++++ .|+++++
T Consensus 88 --------------------v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 88 --------------------VLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred --------------------CCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 2333986666 89999999999 5788888 8988875
No 164
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.42 E-value=6.6e-13 Score=99.60 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=70.9
Q ss_pred EEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcC
Q 026028 93 VKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFK 172 (244)
Q Consensus 93 l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 172 (244)
+.+++++.+...-.+++.+||+||++||++|+...+.++++.++++++ +.++.|++| ... +.. ++|+
T Consensus 35 v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~--------~~~---~l~-~~~~ 101 (140)
T 1v98_A 35 VVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVD--------EHP---GLA-ARYG 101 (140)
T ss_dssp --------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETT--------TCH---HHH-HHTT
T ss_pred cccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECC--------CCH---HHH-HHCC
Confidence 444555554433233434999999999999999999999999999864 999999887 221 222 3333
Q ss_pred CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 173 AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 173 ~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|..+.+++. .|+++|+
T Consensus 102 ----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 102 ----------------------------------VRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp ----------------------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ----------------------------------CCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 2333998888 7999999999998888999 9998875
No 165
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.42 E-value=2e-13 Score=102.02 Aligned_cols=92 Identities=9% Similarity=0.119 Sum_probs=67.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCCh---HHHHHHHHHhcCCCcceeeecCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSN---PEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~---~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
++ ++||+||++||++|+.+.|.+.+++++++ +.++.|+++.. .+. ++..+.+ ++|+
T Consensus 31 ~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~-----~~~~~~d~~~~l~-~~~~----------- 89 (135)
T 3emx_A 31 QG-DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSL-----IGERELSAARLEM-NKAG----------- 89 (135)
T ss_dssp TS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTT-----CCHHHHHHHHHHH-HHHT-----------
T ss_pred CC-cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCc-----hhhhhhhhhHHHH-HHcC-----------
Confidence 44 89999999999999999999999998885 88999988620 111 1122222 2222
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|++++++ +|+++.++.|..+.+.++ .++++++
T Consensus 90 -----------------------v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 90 -----------------------VEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYG 126 (135)
T ss_dssp -----------------------CCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred -----------------------CceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 44459666665 999999999999988888 8888764
No 166
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.41 E-value=2.1e-13 Score=99.03 Aligned_cols=88 Identities=20% Similarity=0.272 Sum_probs=67.6
Q ss_pred CCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 104 SKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 104 ~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.+.+||++||+||++||++|+...+.++++.+++ ++.++.|++| .. .+.+ ++++
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~--------~~---~~~~-~~~~----------- 82 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVD--------KL---EETA-RKYN----------- 82 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETT--------TS---HHHH-HHTT-----------
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECC--------cc---HHHH-HHcC-----------
Confidence 4457899999999999999999999999999888 5899999876 22 2233 3433
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|...|+++++ ++|+++.++.| .++++++ .|+++|
T Consensus 83 -----------------------v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 83 -----------------------ISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp -----------------------CCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred -----------------------CCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 2333986665 89999999999 5677888 787764
No 167
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.41 E-value=4.9e-13 Score=102.09 Aligned_cols=87 Identities=10% Similarity=0.165 Sum_probs=69.3
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+.+.|.+.+++++++ ++.++.|++| ... +.+ ++|+
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~--------~~~---~l~-~~~~-------------- 82 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAE--------GVP---EVS-EKYE-------------- 82 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TSH---HHH-HHTT--------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECC--------CCH---HHH-HHcC--------------
Confidence 48999999999999999999999999999984 5899999887 221 233 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|++++++ +|+++.++.|. +++++. .|++++.
T Consensus 83 --------------------v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~ 118 (153)
T 2wz9_A 83 --------------------ISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHAS 118 (153)
T ss_dssp --------------------CCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSC
T ss_pred --------------------CCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhc
Confidence 23349999998 99999999885 567788 8888764
No 168
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.40 E-value=5.5e-13 Score=94.29 Aligned_cols=88 Identities=18% Similarity=0.308 Sum_probs=67.9
Q ss_pred CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 105 KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 105 ~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
+.+||++||.||++||++|+...+.++++.++++ ++.++.|++| ... +.+ ++++
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~--------~~~---~~~-~~~~------------ 69 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVD--------QNE---EAA-AKYS------------ 69 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TCH---HHH-HHTT------------
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEecc--------CCH---HHH-HHcC------------
Confidence 3468999999999999999999999999999986 5999999876 221 233 3333
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+...|+++++ ++|+++.++.| .++++++ .|+++|
T Consensus 70 ----------------------v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 70 ----------------------VTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp ----------------------CCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ----------------------CccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 2233986666 59999999999 5778888 887764
No 169
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.40 E-value=8.4e-13 Score=94.24 Aligned_cols=86 Identities=14% Similarity=0.177 Sum_probs=66.9
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...|.+.++.++++ ++.++.|++| .. .+.+ ++++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~--------~~---~~~~-~~~~-------------- 71 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVH--------QC---QGTA-ATNN-------------- 71 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TS---HHHH-HHTT--------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECc--------cC---HHHH-HhcC--------------
Confidence 57899999999999999999999999999984 4899999887 22 2233 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|...|+++++ ++|+++.++.|.. +++++ .|++++
T Consensus 72 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~l 106 (107)
T 1gh2_A 72 --------------------ISATPTFQFF-RNKVRIDQYQGAD-AVGLEEKIKQHL 106 (107)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred --------------------CCcccEEEEE-ECCeEEEEEeCCC-HHHHHHHHHHhc
Confidence 2334988777 8999999999954 45587 887765
No 170
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.39 E-value=1.1e-12 Score=98.99 Aligned_cols=43 Identities=16% Similarity=-0.030 Sum_probs=39.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.||++||+||++||++|+.+.|.|.+++++++++ +.++.|++|
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d 64 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 64 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEccc
Confidence 4789999999999999999999999999999764 999999887
No 171
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.39 E-value=4.9e-13 Score=97.05 Aligned_cols=83 Identities=22% Similarity=0.319 Sum_probs=64.3
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...+.|+++.+++++ +.++.|++| ... +++ ++++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~--------~~~---~l~-~~~~-------------- 80 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVD--------ESP---DIA-KECE-------------- 80 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC--------CCH---HHH-HHCC--------------
Confidence 578999999999999999999999999999875 899999887 221 233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQ 239 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~ 239 (244)
|...|+++++ ++|+++.++.|.. +++++ .|+
T Consensus 81 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~ 112 (114)
T 2oe3_A 81 --------------------VTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIK 112 (114)
T ss_dssp --------------------CCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHH
T ss_pred --------------------CCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHH
Confidence 2333887665 9999999999977 66666 554
No 172
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.39 E-value=5.6e-13 Score=96.09 Aligned_cols=86 Identities=12% Similarity=0.138 Sum_probs=67.4
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...+.+.++.++++ ++.++.|++| ... +.+ ++++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~--------~~~---~~~-~~~~-------------- 76 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVD--------EVS---EVT-EKEN-------------- 76 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TTH---HHH-HHTT--------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECC--------CCH---HHH-HHcC--------------
Confidence 68999999999999999999999999999986 4899999886 222 233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|...|+++++ ++|+++.++.|. +.++++ .|++++
T Consensus 77 --------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 77 --------------------ITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred --------------------CCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 2233885555 799999999998 888888 887765
No 173
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=2.4e-13 Score=101.78 Aligned_cols=89 Identities=19% Similarity=0.122 Sum_probs=67.6
Q ss_pred cCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCC
Q 026028 106 FKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNG 185 (244)
Q Consensus 106 ~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~ 185 (244)
.+++++||+||++||++|+.+.|.+++++++|++.++.++.|++| .. .+.+ +++++..+.
T Consensus 24 ~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~--------~~---~~~~-~~~~v~~~~-------- 83 (137)
T 2dj0_A 24 DKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG--------RY---TDVS-TRYKVSTSP-------- 83 (137)
T ss_dssp STTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT--------TC---HHHH-HHTTCCCCS--------
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc--------cC---HHHH-HHccCcccC--------
Confidence 356799999999999999999999999999998767999999876 22 2333 555543110
Q ss_pred CCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhH
Q 026028 186 PNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQI 235 (244)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l 235 (244)
.+..+|+++++ ++|+++.++.|..+.+++
T Consensus 84 --------------------~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~l 112 (137)
T 2dj0_A 84 --------------------LTKQLPTLILF-QGGKEAMRRPQIDKKGRA 112 (137)
T ss_dssp --------------------SSSCSSEEEEE-SSSSEEEEESCBCSSSCB
T ss_pred --------------------CcCCCCEEEEE-ECCEEEEEecCcCchHHH
Confidence 13345998888 799999999988776543
No 174
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.38 E-value=1.2e-12 Score=92.90 Aligned_cols=89 Identities=18% Similarity=0.300 Sum_probs=67.9
Q ss_pred CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 105 KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 105 ~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
+.+||++||.||++||++|+...+.++++.+++++ ++.++.|++| .. .+.. ++++
T Consensus 17 ~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~--------~~---~~~~-~~~~------------ 71 (106)
T 1xwb_A 17 KASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVD--------EC---EDIA-MEYN------------ 71 (106)
T ss_dssp HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETT--------TC---HHHH-HHTT------------
T ss_pred hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEecc--------ch---HHHH-HHcC------------
Confidence 34689999999999999999999999999999874 4999999876 22 1233 3333
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+...|+++++ ++|+++.++.| .+++++. .|+++|
T Consensus 72 ----------------------v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 72 ----------------------ISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp ----------------------CCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred ----------------------CCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 2233885555 89999999999 6777787 777654
No 175
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.38 E-value=7.1e-13 Score=95.40 Aligned_cols=86 Identities=9% Similarity=0.114 Sum_probs=68.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+++++||+||++||++|+...+.+.++.++++ ++.++.|++| .. .+.+ ++++
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~--------~~---~~l~-~~~~-------------- 69 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSE--------AR---PELM-KELG-------------- 69 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGG--------GC---HHHH-HHTT--------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCc--------CC---HHHH-HHcC--------------
Confidence 46899999999999999999999999998876 4888988876 11 2222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
|..+|+++++ ++|+++.++.|..++++++ .|++.
T Consensus 70 --------------------v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 70 --------------------FERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp --------------------CCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC
T ss_pred --------------------CcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHH
Confidence 2334999999 9999999999988888888 77654
No 176
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.38 E-value=7.4e-13 Score=96.36 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=63.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.|+++||+||++||++|+.+.|.+.++.++++. .++.+.+|. ..+.+...+++ ++++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~-----~~~~~~~~~~~-~~~~-------------- 84 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEE-----PSQLNDLQAFR-SRYG-------------- 84 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTC-----GGGHHHHHHHH-HHHT--------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCC-----cCcHHHHHHHH-HHcC--------------
Confidence 578999999999999999999999999998753 455565551 01223334444 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DI 238 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i 238 (244)
|..+|+++++ ++|+++.++.|..+.+++. .|
T Consensus 85 --------------------i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l 116 (118)
T 1zma_A 85 --------------------IPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFA 116 (118)
T ss_dssp --------------------CCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHH
T ss_pred --------------------CCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHh
Confidence 3344999888 5999999999988877766 44
No 177
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.38 E-value=9.3e-13 Score=95.36 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=68.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...+.++++.++++ ++.++.|++| .. .+.+ ++++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~--------~~---~~~~-~~~~-------------- 78 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVD--------EL---KDVA-EAYN-------------- 78 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TS---HHHH-HHTT--------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcc--------cC---HHHH-HHcC--------------
Confidence 48999999999999999999999999999986 5899999876 22 2233 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+...|+++++ ++|+++.++.| .+++++. .|+++++
T Consensus 79 --------------------v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 79 --------------------VEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp --------------------CCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC
T ss_pred --------------------CCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhc
Confidence 2233987777 89999999988 4778888 8888875
No 178
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.38 E-value=1.4e-13 Score=100.51 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=73.4
Q ss_pred EEcCCCCeeecCC-c--CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHH
Q 026028 93 VKDIDGKDVPLSK-F--KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACT 169 (244)
Q Consensus 93 l~~~~g~~v~L~~-~--~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~ 169 (244)
+.+++|...++.+ + .||++||+||++||++|+...+.|.++.+++ .++.++.|++| .. .+.+ +
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~--------~~---~~~~-~ 70 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVD--------KN---GNAA-D 70 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETT--------TC---HHHH-H
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECC--------CC---HHHH-H
Confidence 4455666555552 3 4889999999999999999999999999998 45999999887 22 2233 3
Q ss_pred hcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECC---CCcEEEEcCCCCChhhHH-HHHHH
Q 026028 170 RFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDK---NGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 170 ~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~---~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
+++ |..+|++++++. +|+++.++.|..+ ++++ .|++.
T Consensus 71 ~~~----------------------------------i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 71 AYG----------------------------------VSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp HTT----------------------------------CCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHH
T ss_pred hcC----------------------------------CCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHh
Confidence 433 233499999976 4999999999764 4576 66554
No 179
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.38 E-value=8.7e-13 Score=97.28 Aligned_cols=103 Identities=8% Similarity=-0.031 Sum_probs=73.4
Q ss_pred EEcCCCCeeecCCc-CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc----CCeEEEEEecCCCCCCCCCChHHHHHHH
Q 026028 93 VKDIDGKDVPLSKF-KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT----QGFEILAFPCNQFGGQEPGSNPEIKEFA 167 (244)
Q Consensus 93 l~~~~g~~v~L~~~-~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~----~~~~vi~Vs~D~~~~~~~~~~~~~~~~~ 167 (244)
+.+++++.+...-. .+|++||+||++||++|+.+.|.+.++.+++.. .++.++.|.+| .. .+.+
T Consensus 17 v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~--------~~---~~l~ 85 (127)
T 3h79_A 17 VVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE--------KY---PDVI 85 (127)
T ss_dssp CEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT--------TC---HHHH
T ss_pred eEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc--------cc---HhHH
Confidence 44555554432222 478999999999999999999999999988753 24888999876 22 2233
Q ss_pred HHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEE-EEcCCCCChhhHH-HHHHH
Q 026028 168 CTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVI-ERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 168 ~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~-~~~~g~~~~~~l~-~i~~l 241 (244)
++++ |...|++++++++|++. ..|.|..+.+++. .|+++
T Consensus 86 -~~~~----------------------------------v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 86 -ERMR----------------------------------VSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp -HHTT----------------------------------CCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred -HhcC----------------------------------CccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 4433 23349999998877754 5788988888887 77653
No 180
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.38 E-value=7.8e-13 Score=107.20 Aligned_cols=106 Identities=14% Similarity=0.147 Sum_probs=78.2
Q ss_pred ceEEEcCCCCeeecC-CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHH
Q 026028 90 DFTVKDIDGKDVPLS-KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFAC 168 (244)
Q Consensus 90 df~l~~~~g~~v~L~-~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~ 168 (244)
.-.+..++.+.+.-. .-++|++||+||++||++|+.+.|.+.+++++++++ +.++.|++|. .. +.+
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~----~l~- 77 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTA- 77 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CT----TTG-
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CH----HHH-
Confidence 334445555544321 115789999999999999999999999999999875 9999998872 11 011
Q ss_pred HhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 169 TRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 169 ~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
++|+ |..+|+++++ ++|+++.++.|..+.+++. .|+++++
T Consensus 78 ~~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 78 PKYG----------------------------------IRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp GGGT----------------------------------CCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred HHcC----------------------------------CCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhcc
Confidence 2221 4445988888 5899999999999999999 8888764
No 181
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.37 E-value=7.3e-13 Score=97.50 Aligned_cols=88 Identities=18% Similarity=0.207 Sum_probs=64.8
Q ss_pred CCCEEEEEEecCCCC--------------CCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcC
Q 026028 107 KGKVLLIVNVASRCG--------------LTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFK 172 (244)
Q Consensus 107 ~gk~vll~F~~~~C~--------------~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 172 (244)
+||++||+||++||+ +|+...|.++++.++++++ +.++.|++|. .. +.+ ++
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~----~l~-~~-- 84 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTA-PK-- 84 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT----TTG-GG--
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHH-HH--
Confidence 579999999999999 9999999999999998764 8999998872 10 111 12
Q ss_pred CCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 173 AEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 173 ~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|+ |.+.|+++++ ++|+++.++.|..+.+++. .|+++|
T Consensus 85 -------------------~~-------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 85 -------------------YG-------------IRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp -------------------GT-------------CCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred -------------------cC-------------CCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 21 4455999999 9999999999998888888 777665
No 182
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.34 E-value=9.7e-13 Score=95.79 Aligned_cols=89 Identities=20% Similarity=0.266 Sum_probs=69.5
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+...+.+.++.+++++. +.++.|++| ... +.+ ++++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~--------~~~---~~~-~~~~-------------- 81 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVD--------TNP---ETA-RNFQ-------------- 81 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECC--------CCH---HHH-HhcC--------------
Confidence 4789999999999999999999999999999764 999999887 221 222 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|..+.+++. .|++++.
T Consensus 82 --------------------i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 82 --------------------VVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred --------------------CCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 2333987777 6999999999988888887 7766543
No 183
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.34 E-value=3e-12 Score=91.51 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=68.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC--CeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ--GFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
+++++||+||++||++|+...+.+.++.+++.+. ++.++.|++| ... +.+ ++++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--------~~~---~l~-~~~~------------ 75 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT--------AER---NIC-SKYS------------ 75 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT--------TCH---HHH-HHTT------------
T ss_pred cCCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc--------ccH---hHH-HhcC------------
Confidence 3789999999999999999999999999987654 5888999876 222 233 4433
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHH
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
|...|+++++ ++|+++.++.|..+.+++. .|++
T Consensus 76 ----------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 76 ----------------------VRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp ----------------------CCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHH
T ss_pred ----------------------CCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHh
Confidence 2333987777 8999999999998888887 7665
No 184
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.34 E-value=7.3e-13 Score=96.75 Aligned_cols=89 Identities=13% Similarity=0.026 Sum_probs=68.4
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.+|++||+||++||++|+...+.+.++++++++ ++.++.|++| ... +.+ ++++
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~--------~~~---~~~-~~~~-------------- 72 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQ--------AYP---QTC-QKAG-------------- 72 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETT--------TCH---HHH-HHTT--------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCc--------CCH---HHH-HHcC--------------
Confidence 478999999999999999999999999999986 4999999887 221 233 3333
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC----CChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT----TSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~----~~~~~l~-~i~~lL~ 243 (244)
|..+|++++++++|+ +.++.|. .+.+++. .|+++++
T Consensus 73 --------------------v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 73 --------------------IKAYPSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp --------------------CCSSSEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred --------------------CCccceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 233499999988877 4445553 6788888 8888875
No 185
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.33 E-value=7.2e-13 Score=95.98 Aligned_cols=90 Identities=19% Similarity=0.195 Sum_probs=68.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC--CeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ--GFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
+||++||+||++||++|+...+.+.++.+++++. ++.++.|.++. .. +
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~~----~------------------- 72 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------ES----D------------------- 72 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------CC----S-------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------CH----H-------------------
Confidence 6789999999999999999999999999999864 36777776541 10 1
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEE--EEcCCCCChhhHH-HHHHHHh
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVI--ERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~--~~~~g~~~~~~l~-~i~~lL~ 243 (244)
..+.|+ |..+|+++++ ++|+++ ..+.|..+.+++. .|++++.
T Consensus 73 ---~~~~~~-------------v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 73 ---LAQQYG-------------VRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp ---SHHHHT-------------CCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred ---HHHHCC-------------CCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 111121 3445999999 789877 8899988888888 8877654
No 186
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.98 E-value=1.8e-13 Score=96.95 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=72.8
Q ss_pred EEcCCCCeeecCC-cCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhc
Q 026028 93 VKDIDGKDVPLSK-FKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRF 171 (244)
Q Consensus 93 l~~~~g~~v~L~~-~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~ 171 (244)
+.+++++.+.-.- -.+|++||.||++||++|+...+.++++.+++++ ++.++.|++| .. .+.+ +++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~--------~~---~~~~-~~~ 69 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVD--------EN---PNTA-AQY 69 (106)
Confidence 3444444443211 2578999999999999999999999999999876 3888888765 11 1122 221
Q ss_pred CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 172 KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 172 ~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+ +...|+++++ ++|+++.++.|..+.+++. .|+++|
T Consensus 70 ~----------------------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 70 G----------------------------------IRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 1 2334998888 8999999999988888887 777654
No 187
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.30 E-value=4.2e-12 Score=103.41 Aligned_cols=102 Identities=15% Similarity=0.198 Sum_probs=75.8
Q ss_pred EEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCC--eEEEEEecCCCCCCCCCChHHHHHHHHHh
Q 026028 93 VKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQG--FEILAFPCNQFGGQEPGSNPEIKEFACTR 170 (244)
Q Consensus 93 l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~ 170 (244)
+..++++.+.....+||++||+||++||++|+.+.|.+.++++++++.+ +.++.|.+| .. .+.+ ++
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~--------~~---~~l~-~~ 84 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT--------SA---SVLA-SR 84 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT--------TC---HHHH-HH
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc--------CC---HHHH-Hh
Confidence 3444555554433478999999999999999999999999999998776 888888876 22 2333 44
Q ss_pred cCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 171 FKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 171 ~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|+ |..+|++++++ +|+++ .+.|..+.+++. .|++.+
T Consensus 85 ~~----------------------------------v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 85 FD----------------------------------VSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVS 121 (241)
T ss_dssp TT----------------------------------CCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHH
T ss_pred cC----------------------------------CCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhcc
Confidence 33 23349988885 67776 588988888888 887765
No 188
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.29 E-value=1.9e-11 Score=83.08 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=62.2
Q ss_pred CEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCCc
Q 026028 109 KVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNT 188 (244)
Q Consensus 109 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~ 188 (244)
.++|+.||++||++|+...+.++++.+++++ ++.++.|++|. +. +.+ ++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~------------------ 51 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------NP----QKA-ME------------------ 51 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------SC----CTT-TS------------------
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------CH----HHH-HH------------------
Confidence 5789999999999999999999999999874 49999998762 10 011 11
Q ss_pred hhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 189 APVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|+ +.+.|++++ +|++ ++.|..+.++++ .|+++|
T Consensus 52 ---~~-------------v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 52 ---YG-------------IMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp ---TT-------------TCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred ---CC-------------CcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 11 344598777 8988 788887888888 887764
No 189
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.27 E-value=1.2e-11 Score=93.32 Aligned_cols=86 Identities=12% Similarity=0.137 Sum_probs=60.2
Q ss_pred CEEEEEEecCC--CCCCHHhHHHHHHHHHHhhcCCeE--EEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 109 KVLLIVNVASR--CGLTPSNYSELSHLYEKYKTQGFE--ILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 109 k~vll~F~~~~--C~~C~~~~~~l~~l~~~~~~~~~~--vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
+.+||+||++| |++|+.+.|.|.++.++| + ++. ++.|++| +..+.+ ++|+
T Consensus 35 ~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d-----------~~~~la-~~~~------------ 88 (142)
T 2es7_A 35 GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLE-----------QSEAIG-DRFN------------ 88 (142)
T ss_dssp CSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHH-----------HHHHHH-HTTT------------
T ss_pred CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECC-----------CCHHHH-HhcC------------
Confidence 45778899887 999999999999999999 4 377 8899654 233343 3433
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|+++++ ++|+++.++.|..+.++++ .|+++++
T Consensus 89 ----------------------V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 89 ----------------------VRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp ----------------------CCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC
T ss_pred ----------------------CCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 3444999999 9999999999998888888 8888774
No 190
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=5.4e-12 Score=94.32 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=62.4
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+.+.|.|.++.++|. ++.++.|.+|. .. ++|+
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~--------~~-------~~~~-------------- 77 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNS--------CI-------EHYH-------------- 77 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSS--------SC-------SSCC--------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhc--------Cc-------ccCC--------------
Confidence 46899999999999999999999999999985 48899998762 10 1111
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCC-------ChhhHH-HHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTT-------SPFQIE-DIQK 240 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~-------~~~~l~-~i~~ 240 (244)
|..+|++++++ +|+++.++.|.. +.++++ .|++
T Consensus 78 --------------------i~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~ 118 (135)
T 2dbc_A 78 --------------------DNCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSE 118 (135)
T ss_dssp --------------------SSCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHH
T ss_pred --------------------CCCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHH
Confidence 34449988885 999999988875 455566 5554
No 191
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.26 E-value=1.3e-12 Score=96.37 Aligned_cols=87 Identities=22% Similarity=0.271 Sum_probs=66.8
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+||++||+||++||++|+...+.|+++.++++ ++.++.|++|. .. +.. ++++
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~----~~~-~~~~-------------- 86 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------LK----EVA-EKYN-------------- 86 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------SG----GGH-HHHT--------------
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------hH----HHH-HHcC--------------
Confidence 58999999999999999999999999999986 58889888761 11 112 2222
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|...|+++++ ++|+++.++.| .+.+++. .|+++++
T Consensus 87 --------------------v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 87 --------------------VEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVG 122 (130)
T ss_dssp --------------------CCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTS
T ss_pred --------------------CCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHh
Confidence 2334876555 89999999988 4677888 8888775
No 192
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.25 E-value=4.8e-13 Score=102.12 Aligned_cols=77 Identities=8% Similarity=0.055 Sum_probs=51.8
Q ss_pred cCCCEEEEEEecCCCCCCHHhHHHHHHHH--HHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 106 FKGKVLLIVNVASRCGLTPSNYSELSHLY--EKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 106 ~~gk~vll~F~~~~C~~C~~~~~~l~~l~--~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
..||+|||+||++||++|+.+.|.+.+.. .++.+ ..++.|.+|. +..+. . .+++
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~------e~~~~----~-~~~~----------- 97 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMH------ETTDK----N-LSPD----------- 97 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESS------CCSCG----G-GCTT-----------
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecC------Cchhh----H-hhcC-----------
Confidence 36899999999999999999999887642 22322 2345555541 01100 0 1110
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCC
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~ 229 (244)
+.++|+++++|++|+++.+..|.
T Consensus 98 -----------------------v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 98 -----------------------GQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp -----------------------CCCSSEEEEECTTSCBCTTCCCS
T ss_pred -----------------------CCCCCEEEEECCCCCEEEEEeCC
Confidence 23349999999999999999897
No 193
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.25 E-value=6.8e-12 Score=85.38 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=61.7
Q ss_pred EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCCch
Q 026028 110 VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTA 189 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~ 189 (244)
++|+.||++||++|+...+.++++.+++++ ++.++.|++|. +. +.+ ++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~~~----------------- 52 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMV-------DR----EKA-IEYG----------------- 52 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTT-------CG----GGG-GGTC-----------------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCC-------CH----HHH-HhCC-----------------
Confidence 468899999999999999999999999975 48999998761 11 111 2222
Q ss_pred hhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 190 PVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+.++|++++ +|++ ++.|..+.+++. .|+++|+
T Consensus 53 -----------------v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 53 -----------------LMAVPAIAI---NGVV--RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp -----------------SSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHCC
T ss_pred -----------------ceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHhC
Confidence 334498877 8998 677877788888 8887763
No 194
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.22 E-value=1.5e-11 Score=111.43 Aligned_cols=107 Identities=11% Similarity=0.112 Sum_probs=79.3
Q ss_pred EEcCCCCeeecCCc-CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc--CCeEEEEEecCCCCCCCCCChHHHHHHHHH
Q 026028 93 VKDIDGKDVPLSKF-KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT--QGFEILAFPCNQFGGQEPGSNPEIKEFACT 169 (244)
Q Consensus 93 l~~~~g~~v~L~~~-~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~--~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~ 169 (244)
+..++++.+...-. .||++||+||++||++|+.+.|.+.++++++++ .++.++.|++| . ++..+.+ +
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d--------~-d~~~~l~-~ 83 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCA--------E-ETNSAVC-R 83 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETT--------S-GGGHHHH-H
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECC--------c-cccHHHH-H
Confidence 33444444432222 368999999999999999999999999999987 35999999886 1 1223333 4
Q ss_pred hcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECC---CCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 170 RFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDK---NGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 170 ~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~---~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+|+ |..+|+++++++ +|+++..+.|..+.+++. .|+++|+
T Consensus 84 ~~~----------------------------------V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~ 127 (519)
T 3t58_A 84 EFN----------------------------------IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALE 127 (519)
T ss_dssp HTT----------------------------------CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHT
T ss_pred HcC----------------------------------CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHh
Confidence 433 334499999997 788888888888888888 8888875
No 195
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.22 E-value=3e-11 Score=99.08 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=68.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc--CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT--QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~--~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
.++++||+||++||++|+...|.+.++++++++ .++.++.|++|. +.. .+.+ ++++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------~~~---~~l~-~~~~------------ 86 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE------ETN---SAVC-RDFN------------ 86 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS------TTT---HHHH-HHTT------------
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc------hhh---HHHH-HHcC------------
Confidence 458999999999999999999999999999987 359999999851 111 2333 4433
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCC-----CcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKN-----GKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~-----G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|.++|+++++++. |+++ .+.| .+.+++. .|.++|+
T Consensus 87 ----------------------v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~ 127 (244)
T 3q6o_A 87 ----------------------IPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALE 127 (244)
T ss_dssp ----------------------CCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHH
T ss_pred ----------------------CCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHH
Confidence 3334999999862 4454 5666 5788888 8888775
No 196
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.22 E-value=5.2e-11 Score=96.15 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=68.9
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc---CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT---QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~---~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.++++||+||++||++|+.+.|.++++++++++ .++.++.|++| .. .+.+ ++|+
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~--------~~---~~l~-~~~~----------- 189 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI--------EY---PEWA-DQYN----------- 189 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG--------GC---HHHH-HHTT-----------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc--------cC---HHHH-HhCC-----------
Confidence 344559999999999999999999999999983 35999999876 11 2223 3333
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|.++|+++++ ++|+++.++.|..+.+++. .|+++++
T Consensus 190 -----------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 190 -----------------------VMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp -----------------------CCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -----------------------CcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhhC
Confidence 2334986666 7999999999999888888 8887763
No 197
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.20 E-value=3.1e-11 Score=93.97 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=38.1
Q ss_pred CCeeecCCcCCCEEEEEEecCCCCCCHHhHHH---HHHHHHHhhcCCeEEEEEecC
Q 026028 98 GKDVPLSKFKGKVLLIVNVASRCGLTPSNYSE---LSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 98 g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~---l~~l~~~~~~~~~~vi~Vs~D 150 (244)
++.+.....+||+|||+||++||++|+.+.++ ..++.+.+.+ ++.++.|..|
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~d 83 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDRE 83 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETT
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCc
Confidence 34455555679999999999999999998773 2455555554 3778888765
No 198
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.18 E-value=3.2e-11 Score=88.16 Aligned_cols=41 Identities=17% Similarity=0.054 Sum_probs=37.3
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
+++|||+||++||++|+...|.|.++.++|.+ +.++.|.+|
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d 63 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVN 63 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhH
Confidence 45999999999999999999999999999864 899999876
No 199
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.13 E-value=9.2e-11 Score=84.20 Aligned_cols=83 Identities=8% Similarity=0.267 Sum_probs=61.0
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCC
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPN 187 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~ 187 (244)
++++||+|+++|||+|+...|.++++.++ .++.++.|.+| ....+...+.+++++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVd--------e~r~~Sn~IA~~~~V-------------- 78 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQ--------QERDLSDYIAKKTNV-------------- 78 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGG--------GGHHHHHHHHHHHTC--------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEee--------cCchhhHHHHHHhCC--------------
Confidence 78999999999999999999999999874 34889999887 333333333355443
Q ss_pred chhhHHHhhhccCCCcCCcccc-ceeEEEECCCCcEEEE-cCCCCChhhHH
Q 026028 188 TAPVYQFLKSSAGGFLGDLVKW-NFEKFLVDKNGKVIER-YPPTTSPFQIE 236 (244)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~-~P~~~lID~~G~I~~~-~~g~~~~~~l~ 236 (244)
.+ .|+++|+ ++|+++++ -.+..+.++++
T Consensus 79 --------------------~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~ 108 (112)
T 3iv4_A 79 --------------------KHESPQAFYF-VNGEMVWNRDHGDINVSSLA 108 (112)
T ss_dssp --------------------CCCSSEEEEE-ETTEEEEEEEGGGCSHHHHH
T ss_pred --------------------ccCCCeEEEE-ECCEEEEEeeccccCHHHHH
Confidence 32 4988888 99999987 34555555554
No 200
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.11 E-value=2.6e-10 Score=93.63 Aligned_cols=88 Identities=14% Similarity=0.115 Sum_probs=66.3
Q ss_pred CcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc---CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeec
Q 026028 105 KFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT---QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKV 181 (244)
Q Consensus 105 ~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~---~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~ 181 (244)
+++|+++|+.||++||++|+...|.++++++++++ .++.+..|.++ ... +.+ ++|+
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~--------~~~---~~~-~~~~--------- 193 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY--------ENP---DIA-DKYG--------- 193 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT--------TCH---HHH-HHTT---------
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc--------cCH---HHH-HHcC---------
Confidence 45688999999999999999999999999999842 46888888776 111 222 3333
Q ss_pred CCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 182 DVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|..+|++++ +|+++ +.|..+.+++. .|++.+.
T Consensus 194 -------------------------V~~vPt~~i---~G~~~--~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 194 -------------------------VMSVPSIAI---NGYLV--FVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp -------------------------CCSSSEEEE---TTEEE--EESCCCHHHHHHHHHHHHT
T ss_pred -------------------------CeeeCeEEE---CCEEE--EeCCCCHHHHHHHHHHHhh
Confidence 233498877 78875 77888888888 8887764
No 201
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.10 E-value=1.2e-10 Score=95.55 Aligned_cols=42 Identities=12% Similarity=0.035 Sum_probs=38.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
+|++|||+||++||++|+.+.|.|.+++++|.+ +.++.|.+|
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d 173 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKAS 173 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHH
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCC
Confidence 478999999999999999999999999999964 899999754
No 202
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.09 E-value=1.5e-10 Score=101.23 Aligned_cols=104 Identities=14% Similarity=0.211 Sum_probs=74.5
Q ss_pred EEcCCCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc-----CCeEEEEEecCCCCCCCCCChHHHHHHH
Q 026028 93 VKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKT-----QGFEILAFPCNQFGGQEPGSNPEIKEFA 167 (244)
Q Consensus 93 l~~~~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~-----~~~~vi~Vs~D~~~~~~~~~~~~~~~~~ 167 (244)
+.+++++.+...--+++++||.||++||++|+...|.+.++.+++++ .++.++.|.+| .. .+.+
T Consensus 7 v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~--------~~---~~l~ 75 (382)
T 2r2j_A 7 ITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD--------QH---SDIA 75 (382)
T ss_dssp -CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT--------TC---HHHH
T ss_pred eEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC--------cc---HHHH
Confidence 34455544432112578999999999999999999999999999963 23889999876 22 2333
Q ss_pred HHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEE-EcCCCCChhhHH-HHHHHHh
Q 026028 168 CTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIE-RYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 168 ~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~-~~~g~~~~~~l~-~i~~lL~ 243 (244)
++++ |.++|+++++ ++|+++. .|.|..+.+++. .|++.+.
T Consensus 76 -~~~~----------------------------------v~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 76 -QRYR----------------------------------ISKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKS 117 (382)
T ss_dssp -HHTT----------------------------------CCEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHS
T ss_pred -HhcC----------------------------------CCcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhcc
Confidence 4443 3334987776 6899887 499988888888 8877653
No 203
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.9e-10 Score=97.24 Aligned_cols=91 Identities=13% Similarity=0.118 Sum_probs=67.6
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.++++||+||++||++|+.+.|.+.++++++++. +.++.|.+|. +. ..+.+ ++++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~------~~---~~~l~-~~~~-------------- 88 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL------NK---NKALC-AKYD-------------- 88 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS------TT---THHHH-HHTT--------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC------cc---CHHHH-HhCC--------------
Confidence 4789999999999999999999999999999875 8999999872 11 13333 4433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCC----------------cEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNG----------------KVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G----------------~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|.++|++++++..+ .....|.|..+.+.+. .|.+.+
T Consensus 89 --------------------I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 89 --------------------VNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp --------------------CCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred --------------------CCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 33349888886543 2467888988888777 665544
No 204
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.07 E-value=4.5e-11 Score=86.72 Aligned_cols=92 Identities=10% Similarity=0.022 Sum_probs=62.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhh-cCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYK-TQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNG 185 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~-~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~ 185 (244)
+.+.+||+||++||++|+..-+.+...++... .+.+.|+.|.+|. +.. ..++ .
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~------~~~---~~la-~---------------- 70 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD------PLP---PGLE-L---------------- 70 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS------CCC---TTCB-C----------------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC------CCc---hhHH-H----------------
Confidence 44689999999999999988765554433211 1126777777762 010 0000 0
Q ss_pred CCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 186 PNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
.| .|.++|++++++ +|+.+.+..|..+++++. .|++++.
T Consensus 71 -----~~-------------~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 71 -----AR-------------PVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp -----SS-------------CCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHH
T ss_pred -----HC-------------CCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHh
Confidence 11 144559999998 999999999999999998 8888775
No 205
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.05 E-value=1.3e-09 Score=83.14 Aligned_cols=91 Identities=10% Similarity=0.016 Sum_probs=64.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
+||+|+|+|+++||+.|+.+-... .++.+.+.+ ++.+|.+.+| + .+..++. ++|++
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~--------~-~~~~~l~-~~y~v---------- 99 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHD--------S-EEGQRYI-QFYKL---------- 99 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESS--------S-HHHHHHH-HHHTC----------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecC--------C-HhHHHHH-HHcCC----------
Confidence 589999999999999999876544 344444433 4788888765 3 2334555 45442
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCC-CcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKN-GKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~-G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
.+.|++++||++ |+.+..+.| .+++++. .|+++++
T Consensus 100 ------------------------~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 100 ------------------------GDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp ------------------------CSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHH
T ss_pred ------------------------CCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHH
Confidence 223999999998 877777766 7888888 8888764
No 206
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.04 E-value=1.2e-09 Score=72.75 Aligned_cols=37 Identities=8% Similarity=0.005 Sum_probs=32.1
Q ss_pred EEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEe
Q 026028 111 LLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFP 148 (244)
Q Consensus 111 vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs 148 (244)
+.|+||++||++|+...+.++++.++++++ +.++.|.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~ 38 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID-AEFEKIK 38 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC-EEEEEEC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc-eEEEEec
Confidence 468999999999999999999999998753 8888773
No 207
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.04 E-value=4.5e-10 Score=91.24 Aligned_cols=89 Identities=12% Similarity=0.195 Sum_probs=68.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCC--eEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQG--FEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
.++++||+||++||++|+...|.+.++.+++++++ +.++.|.+| .. .+.+ +++++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~--------~~---~~l~-~~~~v----------- 202 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT--------AE---TDLA-KRFDV----------- 202 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT--------TC---HHHH-HHTTC-----------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC--------CC---HHHH-HHcCC-----------
Confidence 57899999999999999999999999999998754 888888876 22 2233 44432
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
...|++++++ +|+++. |.|..+.+++. .|++.+.
T Consensus 203 -----------------------~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 203 -----------------------SGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp -----------------------CSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHTT
T ss_pred -----------------------cccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhhC
Confidence 2339888885 688776 88988888888 8777653
No 208
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.04 E-value=2.1e-10 Score=92.64 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=57.7
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+|++|||+||++||++|+...|.|.++.++|. ++.++.|.+| ....+ ++
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~------------~~~l~-~~---------------- 167 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS------------NTGAG-DR---------------- 167 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH------------HHTCS-TT----------------
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC------------cHHHH-HH----------------
Confidence 45899999999999999999999999999985 4889888642 01111 11
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCCh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSP 232 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~ 232 (244)
| .|..+|+++++ ++|+++.++.|..+.
T Consensus 168 -----~-------------~i~~~PTl~~~-~~G~~v~~~~G~~~~ 194 (217)
T 2trc_P 168 -----F-------------SSDVLPTLLVY-KGGELISNFISVAEQ 194 (217)
T ss_dssp -----S-------------CGGGCSEEEEE-ETTEEEEEETTGGGG
T ss_pred -----C-------------CCCCCCEEEEE-ECCEEEEEEeCCccc
Confidence 1 14445998888 599999999887653
No 209
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.04 E-value=4.9e-11 Score=107.10 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=69.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC-CeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ-GFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNG 185 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~ 185 (244)
.||+|||+||++||++|+.+.|.+.++++++++. ++.++.|..+. . +.. +++
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~--------~----~~~-~~~-------------- 421 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA--------N----DVP-SPY-------------- 421 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS--------S----CCC-TTC--------------
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc--------h----hhH-hhC--------------
Confidence 4899999999999999999999999999999875 68888887651 0 000 111
Q ss_pred CCchhhHHHhhhccCCCcCCccccceeEEEECCCCcE-EEEcCCCCChhhHH-HHHHHH
Q 026028 186 PNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKV-IERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I-~~~~~g~~~~~~l~-~i~~lL 242 (244)
.|.++|++++++++|++ +.+|.|..+.+++. .|++.+
T Consensus 422 --------------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 460 (481)
T 3f8u_A 422 --------------------EVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA 460 (481)
T ss_dssp --------------------CCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHC
T ss_pred --------------------CCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhc
Confidence 13445999999988875 67888988888888 777654
No 210
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.02 E-value=2.4e-10 Score=83.74 Aligned_cols=46 Identities=11% Similarity=0.118 Sum_probs=40.7
Q ss_pred CCcCCCEEEEEEecC-------CCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 104 SKFKGKVLLIVNVAS-------RCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 104 ~~~~gk~vll~F~~~-------~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.+.+||++||+||++ ||++|+...|.|.++++++++ ++.++.|.++
T Consensus 20 ~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 20 EQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp HTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred HHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 344589999999999 999999999999999999875 5999999875
No 211
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.00 E-value=5e-12 Score=90.67 Aligned_cols=40 Identities=10% Similarity=0.033 Sum_probs=34.3
Q ss_pred CeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhh
Q 026028 99 KDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYK 138 (244)
Q Consensus 99 ~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~ 138 (244)
+.+.|+++.||++||+||++||++|+.+.|.+.++.++++
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 3456777888999999999999999999999999886654
No 212
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.00 E-value=1.2e-09 Score=94.30 Aligned_cols=87 Identities=9% Similarity=0.092 Sum_probs=66.6
Q ss_pred CCCEEEEEEecCCCCCCHHhHHH-------HHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceee
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSE-------LSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFD 179 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~-------l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~ 179 (244)
+++++||+||++||+ |+.+.|. +.++.+++++.++.++.|.+| .. .+.+ ++++
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~--------~~---~~l~-~~~~------- 86 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAK--------KE---AKLA-KKLG------- 86 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETT--------TT---HHHH-HHHT-------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCC--------CC---HHHH-HhcC-------
Confidence 468999999999999 9888888 889999998778999999887 22 2233 4433
Q ss_pred ecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 180 KVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 180 d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|.+.|+++++ ++|+ +..|.|..+.+.+. .|++.+
T Consensus 87 ---------------------------v~~~Pt~~~~-~~g~-~~~~~G~~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 87 ---------------------------FDEEGSLYVL-KGDR-TIEFDGEFAADVLVEFLLDLI 121 (350)
T ss_dssp ---------------------------CCSTTEEEEE-ETTE-EEEECSCCCHHHHHHHHHTTS
T ss_pred ---------------------------CCccceEEEE-ECCc-EEEecCCCCHHHHHHHHHHhc
Confidence 2334998888 7888 45888988888877 776543
No 213
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.99 E-value=5e-10 Score=101.14 Aligned_cols=89 Identities=16% Similarity=0.149 Sum_probs=71.1
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
+++++||.||++||++|+...|.+.++.+++++.++.++.|.+|. . .+.+ ++|++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~--------~---~~l~-~~~~v------------- 84 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE--------N---QDLC-MEHNI------------- 84 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT--------C---HHHH-HHTTC-------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC--------C---HHHH-HhcCC-------------
Confidence 478999999999999999999999999999988779999998872 2 2333 45443
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcE--EEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKV--IERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I--~~~~~g~~~~~~l~-~i~~lL 242 (244)
.+.|+++++ ++|++ +..|.|..+.+.+. .|.+.+
T Consensus 85 ---------------------~~~Pt~~~~-~~g~~~~~~~~~G~~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 85 ---------------------PGFPSLKIF-KNSDVNNSIDYEGPRTAEAIVQFMIKQS 121 (504)
T ss_dssp ---------------------CSSSEEEEE-ETTCTTCEEECCSCCSHHHHHHHHHHHT
T ss_pred ---------------------CcCCEEEEE-eCCccccceeecCCCCHHHHHHHHHHhc
Confidence 334988888 46776 78899988888888 777665
No 214
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.98 E-value=1.6e-09 Score=85.27 Aligned_cols=132 Identities=11% Similarity=0.112 Sum_probs=88.3
Q ss_pred cccccCCcccc--eEEEc--CC---------C--CeeecCCc--CCCEEEEEEe-cCCCCCCHH-hHHHHHHHHHHh-hc
Q 026028 80 ATAATEKSLYD--FTVKD--ID---------G--KDVPLSKF--KGKVLLIVNV-ASRCGLTPS-NYSELSHLYEKY-KT 139 (244)
Q Consensus 80 ~~~~~g~~~pd--f~l~~--~~---------g--~~v~L~~~--~gk~vll~F~-~~~C~~C~~-~~~~l~~l~~~~-~~ 139 (244)
-...+|+++|. +++.= .+ | ++++++++ +||.|||+++ +.+.|.|.. ++|.+.+.++++ +.
T Consensus 24 ~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~ 103 (199)
T 4h86_A 24 MSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKE 103 (199)
T ss_dssp BCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHH
T ss_pred hHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHh
Confidence 34558999994 44332 21 2 35777774 7888777665 899999975 799999988875 67
Q ss_pred CCe-EEEEEecCCCCCCCCCChHHHHHHHHHhcCC----CcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEE
Q 026028 140 QGF-EILAFPCNQFGGQEPGSNPEIKEFACTRFKA----EFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKF 214 (244)
Q Consensus 140 ~~~-~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~----~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~ 214 (244)
+|+ +|+.|++| +...+.+|. +..+. .++++.|. ++ +..+.++......+ ......+..+
T Consensus 104 kGvd~I~ciSVN--------D~FVm~AW~-k~~~~~~~~~i~~laD~--~~-eftkalGl~~~~~~----gg~RS~Rya~ 167 (199)
T 4h86_A 104 KEVDQVIVVTVD--------NPFANQAWA-KSLGVKDTTHIKFASDP--GC-AFTKSIGFELAVGD----GVYWSGRWAM 167 (199)
T ss_dssp SCCCEEEEEESS--------CHHHHHHHH-HHTTCCCCSSEEEEECG--GG-HHHHHTTCEEEEET----TEEEECSEEE
T ss_pred cCCcEEEEEEcC--------CHHHHHHHH-HHhcccccccccccCCc--ch-HHHHhcCceeecCC----CcceeeEEEE
Confidence 777 79999998 899999998 55444 46677443 22 23444443221111 1123347789
Q ss_pred EECCCCcEEEEcCC
Q 026028 215 LVDKNGKVIERYPP 228 (244)
Q Consensus 215 lID~~G~I~~~~~g 228 (244)
||| ||+|.+.+..
T Consensus 168 IVd-DGvV~~~~vE 180 (199)
T 4h86_A 168 VVE-NGIVTYAAKE 180 (199)
T ss_dssp EEE-TTEEEEEEEC
T ss_pred EEE-CCEEEEEEEe
Confidence 998 9999988754
No 215
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.96 E-value=1.1e-09 Score=98.17 Aligned_cols=88 Identities=15% Similarity=0.211 Sum_probs=70.6
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.|+++||.||++||++|+...|.+.++.+++++. +.++.|.+| .. .+.+ ++++
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~--------~~---~~l~-~~~~-------------- 72 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCT--------AN---TNTC-NKYG-------------- 72 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETT--------TC---HHHH-HHTT--------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECC--------CC---HHHH-HhcC--------------
Confidence 3489999999999999999999999999999887 889999887 22 2333 4443
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
|.++|+++++ ++|+++..|.|..+.+++. .|++.+
T Consensus 73 --------------------v~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~ 108 (481)
T 3f8u_A 73 --------------------VSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQA 108 (481)
T ss_dssp --------------------CCEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHT
T ss_pred --------------------CCCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhc
Confidence 3334987777 8899899999999888888 777765
No 216
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.94 E-value=2.3e-09 Score=86.71 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=63.6
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.++++|++||++||++|+...+.++++.+++. ++.++.|.+| .. .+.+ ++|+
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~--------~~---~~l~-~~~~-------------- 186 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDAS--------EN---QDLA-EQFQ-------------- 186 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGG--------GC---HHHH-HHTT--------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECC--------CC---HHHH-HHcC--------------
Confidence 34566889999999999999999999999983 5899999876 11 2233 3433
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|.++|++++ +|+ +.++.|..+.+++. .|+++++
T Consensus 187 --------------------v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 187 --------------------VVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp --------------------CCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred --------------------CcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 233498777 788 46688988888888 8877764
No 217
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.93 E-value=8.9e-10 Score=95.23 Aligned_cols=86 Identities=15% Similarity=0.120 Sum_probs=65.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC-CeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ-GFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNG 185 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~ 185 (244)
.+|++||.||++||++|+.+.|.+.++.++|++. ++.++.|..+. .. + ++++
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~--------~~-----~-~~~~------------- 318 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA--------NE-----V-EAVK------------- 318 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT--------CB-----C-SSCC-------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc--------cc-----h-hhcC-------------
Confidence 5789999999999999999999999999999875 57777776541 10 1 2211
Q ss_pred CCchhhHHHhhhccCCCcCCccccceeEEEECCC-CcEEEEcCCCCChhhHH-HHHH
Q 026028 186 PNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKN-GKVIERYPPTTSPFQIE-DIQK 240 (244)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~-G~I~~~~~g~~~~~~l~-~i~~ 240 (244)
|.+.|++++++++ |+.+.+|.|..+.+++. .|++
T Consensus 319 ---------------------v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~ 354 (361)
T 3uem_A 319 ---------------------VHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLES 354 (361)
T ss_dssp ---------------------CCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTT
T ss_pred ---------------------CcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHh
Confidence 3444999999665 67788999988777776 5543
No 218
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.92 E-value=2.2e-09 Score=101.84 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=71.5
Q ss_pred cCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecC
Q 026028 103 LSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVD 182 (244)
Q Consensus 103 L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d 182 (244)
+.+++|++++|.||++||++|+.+.|.+.+++++++++ +.++.|++| .... .+ +++++
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~--------~~~~---~~-~~~~v--------- 507 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCT--------IHEG---LC-NMYNI--------- 507 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCHH---HH-HHTTC---------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCC--------CCHH---HH-HHcCC---------
Confidence 34457899999999999999999999999999999864 999999876 2222 22 44442
Q ss_pred CCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 183 VNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
...|+++++ ++|++ +.+.|..+.+++. .|+++++
T Consensus 508 -------------------------~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 508 -------------------------QAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp -------------------------CSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHHHHS
T ss_pred -------------------------CcCCeEEEE-cCCce-eeecCcccHHHHHHHHHhhcc
Confidence 223999999 56877 7888988888888 8887763
No 219
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.92 E-value=1.6e-09 Score=96.39 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=39.4
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC-------CeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ-------GFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-------~~~vi~Vs~D 150 (244)
.+|++||+||++||++|+.+.|.+.+++++|++. .+.++.|++|
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d 91 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA 91 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC
Confidence 4589999999999999999999999999999743 2899999887
No 220
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.90 E-value=2.2e-09 Score=83.27 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=40.2
Q ss_pred CCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 98 GKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 98 g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
+....+.+..+|++|+.||..|||+|....+.|.++.+++++ +.|+.+.+
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~ 61 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREW 61 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEEC
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeC
Confidence 444566677889999999999999999999999999998765 55555443
No 221
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.88 E-value=1.4e-09 Score=98.19 Aligned_cols=87 Identities=16% Similarity=0.089 Sum_probs=65.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhh-c-CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYK-T-QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVN 184 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~-~-~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~ 184 (244)
.+|++||+||++||++|+.+.|.+.++.++++ + .++.++.|..+. ... .
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~-------------------~~~----~------ 425 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE-------------------NDV----R------ 425 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG-------------------CCC----S------
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc-------------------ccc----c------
Confidence 47899999999999999999999999999997 3 257777776430 000 0
Q ss_pred CCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcE--EEEcCCCCChhhHH-HHHHHH
Q 026028 185 GPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKV--IERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I--~~~~~g~~~~~~l~-~i~~lL 242 (244)
. | .|.++|+++++ ++|+. +.+|.|..+.+++. .|++.+
T Consensus 426 -----~-~-------------~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~ 466 (504)
T 2b5e_A 426 -----G-V-------------VIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENG 466 (504)
T ss_dssp -----S-C-------------CCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHC
T ss_pred -----c-C-------------CceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcC
Confidence 0 1 14445998888 78876 67888988888888 877764
No 222
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.82 E-value=1.8e-09 Score=102.45 Aligned_cols=89 Identities=12% Similarity=0.006 Sum_probs=69.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.||++||+||++||++|+.+.|.+.+++++++++ +.++.|.+| ... +.+ +++++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~-~~~~~vd~~--------~~~---~~~-~~~~v------------- 727 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK-VRAGKVDCQ--------AYP---QTC-QKAGI------------- 727 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETT--------TCH---HHH-HHTTC-------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-ceEEEEECC--------CCH---HHH-HhcCC-------------
Confidence 4789999999999999999999999999999764 999999876 221 233 34332
Q ss_pred CchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCC----CCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPP----TTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g----~~~~~~l~-~i~~lL~ 243 (244)
...|+++++ ++|+++.++.| ..+.+++. .|+++|+
T Consensus 728 ---------------------~~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~ 767 (780)
T 3apo_A 728 ---------------------KAYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKLE 767 (780)
T ss_dssp ---------------------CSSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHTT
T ss_pred ---------------------CcCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHHH
Confidence 233999888 88888766665 46788888 8888875
No 223
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.76 E-value=2.4e-08 Score=78.72 Aligned_cols=43 Identities=12% Similarity=0.114 Sum_probs=39.0
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.|+++|+.||..|||+|....+.+.++.+++++ ++.++.+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 578999999999999999999999999999987 4888888876
No 224
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.73 E-value=7e-08 Score=83.76 Aligned_cols=88 Identities=13% Similarity=0.070 Sum_probs=65.1
Q ss_pred CCCEEEEEEecCCCCCCHHhH------HHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeee
Q 026028 107 KGKVLLIVNVASRCGLTPSNY------SELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDK 180 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~------~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d 180 (244)
.++++||.||++||++|...- |.+.++.+++++.++.+..|.+| .. .+.+ ++|++
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~--------~~---~~l~-~~~~V------- 89 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSE--------KD---AAVA-KKLGL------- 89 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETT--------TT---HHHH-HHHTC-------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCc--------cc---HHHH-HHcCC-------
Confidence 468999999999999974322 57888888888777999999887 22 2333 44443
Q ss_pred cCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 181 VDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
.+.|+++++. +|+++ .|.|..+.+.+. .|++.+
T Consensus 90 ---------------------------~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~~~~ 123 (367)
T 3us3_A 90 ---------------------------TEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLLDVL 123 (367)
T ss_dssp ---------------------------CSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHHHHH
T ss_pred ---------------------------CcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHHHhc
Confidence 3349888884 78875 788988888888 777665
No 225
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.69 E-value=1.7e-08 Score=79.44 Aligned_cols=43 Identities=14% Similarity=0.141 Sum_probs=38.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.|+++|+.||..|||+|....+.|.++.+++.+ ++.+..+.++
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehh
Confidence 578999999999999999999999999999987 4888777664
No 226
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.69 E-value=4.8e-08 Score=78.57 Aligned_cols=45 Identities=11% Similarity=0.172 Sum_probs=36.5
Q ss_pred eecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 101 VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 101 v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
+.+...+||++|+.||++|||+|+...+.|.++.++ +++|+.+.+
T Consensus 79 ~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~ 123 (216)
T 1eej_A 79 IVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAF 123 (216)
T ss_dssp EEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred eeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 445556789999999999999999999999888652 577777654
No 227
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.68 E-value=5e-08 Score=75.99 Aligned_cols=44 Identities=9% Similarity=0.061 Sum_probs=37.6
Q ss_pred CCCEEEEEEec-------CCCCCCHHhHHHHHHHHHHhhc----CCeEEEEEecC
Q 026028 107 KGKVLLIVNVA-------SRCGLTPSNYSELSHLYEKYKT----QGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~-------~~C~~C~~~~~~l~~l~~~~~~----~~~~vi~Vs~D 150 (244)
++.+|||+||+ .||++|+...|.+.++.++|.. ..+.+..|.+|
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d 90 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN 90 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc
Confidence 45689999999 4999999999999999999972 23888888877
No 228
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.67 E-value=3e-08 Score=73.55 Aligned_cols=88 Identities=9% Similarity=-0.010 Sum_probs=66.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGP 186 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~ 186 (244)
.+++|+++||++ |++|+...|.|.++.++|+++ +.++.|++|+ . .+.+ ++|++
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~--------~---~~~a-~~~gi------------- 74 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA--------F---GAHA-GNLNL------------- 74 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT--------T---GGGT-TTTTC-------------
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH--------h---HHHH-HHcCC-------------
Confidence 357999999999 899999999999999999876 8899997662 1 1122 33333
Q ss_pred CchhhHHHhhhccCCCcCCcccc--ceeEEEECC-CCcEEEEcC--CCCChhhHH-HHHHHHh
Q 026028 187 NTAPVYQFLKSSAGGFLGDLVKW--NFEKFLVDK-NGKVIERYP--PTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~--~P~~~lID~-~G~I~~~~~--g~~~~~~l~-~i~~lL~ 243 (244)
.. +|++++++. +|+. ++.. |..+.++++ .|+++++
T Consensus 75 ---------------------~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 75 ---------------------KTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp ---------------------CSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHH
T ss_pred ---------------------CcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHc
Confidence 11 299888874 5777 5665 888888998 8888874
No 229
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.63 E-value=9.7e-09 Score=73.98 Aligned_cols=38 Identities=8% Similarity=0.185 Sum_probs=28.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
+++++++ ||++||++|+...+.|+++..+ +.++.|..|
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~ 55 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDEL 55 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGS
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCC
Confidence 4566666 9999999999999988887432 456666544
No 230
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.58 E-value=9.2e-08 Score=75.25 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=37.6
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.|+++|+.||..|||+|....+.|.++.+++++ .+.+..+.++
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccc
Confidence 578999999999999999999999999999876 4888777763
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.53 E-value=4.4e-07 Score=72.82 Aligned_cols=91 Identities=21% Similarity=0.237 Sum_probs=62.3
Q ss_pred CcCCCEEEEEEecC-CCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 105 KFKGKVLLIVNVAS-RCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 105 ~~~gk~vll~F~~~-~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
+.+++++|++||++ ||++|+...+.+.++.+. .+ ++.++.|.+| .. +..+.+ ++|++
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~--------~~-~~~~~~-~~~~v---------- 76 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFD--------TP-EGKELA-KRYRI---------- 76 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETT--------SH-HHHHHH-HHTTC----------
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCC--------Cc-ccHHHH-HHcCC----------
Confidence 34567888999999 999999999999998754 33 4899999876 31 124444 45443
Q ss_pred CCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEE-EEcCCCCChhhHH-HHHHHH
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVI-ERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~-~~~~g~~~~~~l~-~i~~lL 242 (244)
...|+++++ ++|+.. .+|.|..+.+++. .+..++
T Consensus 77 ------------------------~~~Pt~~~~-~~g~~~~~~~~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 77 ------------------------DRAPATTIT-QDGKDFGVRYFGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp ------------------------CSSSEEEEE-ETTBCCSEEEESCCCTTHHHHHHHHHH
T ss_pred ------------------------CcCceEEEE-cCCceeeEEEeccCcHHHHHHHHHHHH
Confidence 223888877 566543 5676776666666 666544
No 232
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.47 E-value=1.1e-07 Score=65.22 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=25.5
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.||++||++|+...+.|.++..++ +..|++|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid 35 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFID 35 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECT
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECC
Confidence 67899999999999999887764432 4557766
No 233
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.42 E-value=8.6e-07 Score=72.41 Aligned_cols=135 Identities=8% Similarity=0.048 Sum_probs=69.4
Q ss_pred eeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHH--------Hhc
Q 026028 100 DVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFAC--------TRF 171 (244)
Q Consensus 100 ~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~--------~~~ 171 (244)
.+.+..-.+|++|+.|+..|||+|+...+.+.++.++ .++.|+.+.+... .+++........+ +.+
T Consensus 89 ~i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~~---~~~s~~~a~a~~~a~d~~~~~~~~ 162 (241)
T 1v58_A 89 WLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGVI---KPESPATAAAILASKDPAKTWQQY 162 (241)
T ss_dssp CEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCCS---STTHHHHHHHHHHSSSHHHHHHHH
T ss_pred CceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEECCcC---CCcHHHHHHHHHHccCHHHHHHHH
Confidence 3455555678999999999999999999999887764 2477766654311 1222222211111 111
Q ss_pred CCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 172 KAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 172 ~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
...|..- ..+.........-..+.....-....+|.++|++++.|.+|++ ....|..++++++ .|++++
T Consensus 163 ~~~~~~~-~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 163 EASGGKL-KLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp HHTTTCC-CCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC--
T ss_pred HHHhccC-CCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHH
Confidence 1111000 0000000000000011000000001137778999999989976 5667888888877 666544
No 234
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.39 E-value=5.3e-07 Score=72.63 Aligned_cols=89 Identities=10% Similarity=0.060 Sum_probs=61.4
Q ss_pred CCCEEEEEE----ecCCCCCCHHhHHHHHHHHHHhhc-CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeec
Q 026028 107 KGKVLLIVN----VASRCGLTPSNYSELSHLYEKYKT-QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKV 181 (244)
Q Consensus 107 ~gk~vll~F----~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~ 181 (244)
++.++|+.| |+.||++|+..+|++.++++++.+ ..+.+..|.+| .. .+.+ ++|++
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~--------~~---~~l~-~~~~v-------- 79 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF--------TH---KEET-EKYGV-------- 79 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT--------TC---HHHH-HHTTC--------
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc--------cc---HHHH-HHcCC--------
Confidence 344555555 478899999999999999888843 24888888765 22 3334 45443
Q ss_pred CCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 182 DVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
.++|++++++ +|+...+|.|..+.+++. .+.+++
T Consensus 80 --------------------------~~~Ptl~~~~-~~~~~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 80 --------------------------DRVPTIVIEG-DKDYGIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp --------------------------CBSSEEEEES-SSCCCEEEESCCCTTHHHHHHHHHH
T ss_pred --------------------------CcCcEEEEEC-CCcccceecCCccHHHHHHHHHHHH
Confidence 3349888885 577777888887777777 666554
No 235
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.37 E-value=6e-07 Score=70.35 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=37.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.++++|+.||..+||+|....+.+.++.+++++ ++.+..+.+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPAV 66 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCcc
Confidence 578899999999999999999999999999875 4888777653
No 236
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.28 E-value=2.2e-06 Score=69.98 Aligned_cols=89 Identities=15% Similarity=0.160 Sum_probs=62.1
Q ss_pred CCCEEEEEEec--CCCCCCHHhHHHHHHHHHHhhc-CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCC
Q 026028 107 KGKVLLIVNVA--SRCGLTPSNYSELSHLYEKYKT-QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDV 183 (244)
Q Consensus 107 ~gk~vll~F~~--~~C~~C~~~~~~l~~l~~~~~~-~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~ 183 (244)
.++++||.||+ +||+ ..|.+.++.+++++ .++.|..|.+|+.+ .....+.+ ++|++
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g------~~~~~~l~-~~~~V---------- 79 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYG------DKLNMELS-EKYKL---------- 79 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS------SCCSHHHH-HHTTC----------
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc------chhhHHHH-HHcCC----------
Confidence 45799999999 9998 88999999999975 35899999876200 11123344 55443
Q ss_pred CCCCchhhHHHhhhccCCCcCCccc--cceeEEEECCCCc--EEEEcCCCCChhhHH-HHHHH
Q 026028 184 NGPNTAPVYQFLKSSAGGFLGDLVK--WNFEKFLVDKNGK--VIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~i~--~~P~~~lID~~G~--I~~~~~g~~~~~~l~-~i~~l 241 (244)
. .+|+++++ ++|+ ....|.|..+.+++. .|++.
T Consensus 80 ------------------------~~~~~PTl~~f-~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 80 ------------------------DKESYPVFYLF-RDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp ------------------------CGGGCSEEEEE-ETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred ------------------------CCCCCCEEEEE-eCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 2 33887777 5676 456788888887777 76654
No 237
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.26 E-value=3.4e-06 Score=76.47 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=36.8
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.+++.++.||++||++|+...|.|+++..+++ ++.+..|..|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~ 157 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGG 157 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETT
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEech
Confidence 46788999999999999999999999988876 4888888766
No 238
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.25 E-value=4.2e-06 Score=68.57 Aligned_cols=89 Identities=10% Similarity=0.083 Sum_probs=62.5
Q ss_pred CCCEEEEEEe--cCCCCCCHHhHHHHHHHHHHhhc--CCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecC
Q 026028 107 KGKVLLIVNV--ASRCGLTPSNYSELSHLYEKYKT--QGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVD 182 (244)
Q Consensus 107 ~gk~vll~F~--~~~C~~C~~~~~~l~~l~~~~~~--~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d 182 (244)
.+++|||+|| ++||+ ..|.+.++.++|++ .++.|..|.+|..+ .+...+.+ ++|++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g------~~~n~~la-~~~~V--------- 91 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYG------ELENKALG-DRYKV--------- 91 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSST------TCTTHHHH-HHTTC---------
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccc------ccccHHHH-HHhCC---------
Confidence 4579999999 99998 88999999999975 35899999987210 11123344 55443
Q ss_pred CCCCCchhhHHHhhhccCCCcCCccc--cceeEEEECCCCcE--EEEc--CCCCChhhHH-HHHHHH
Q 026028 183 VNGPNTAPVYQFLKSSAGGFLGDLVK--WNFEKFLVDKNGKV--IERY--PPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~i~--~~P~~~lID~~G~I--~~~~--~g~~~~~~l~-~i~~lL 242 (244)
. ++|+++++- |++ ...| .|..+.+++. .|++.+
T Consensus 92 -------------------------~~~~~PTl~~F~--G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 92 -------------------------DDKNFPSIFLFK--GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp -------------------------CTTSCCEEEEES--SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred -------------------------CcCCCCeEEEEe--CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 2 338888884 773 4567 7888888888 777653
No 239
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.25 E-value=1.8e-06 Score=61.48 Aligned_cols=38 Identities=24% Similarity=0.234 Sum_probs=32.5
Q ss_pred EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 110 VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.+|+.||++||++|....+.|.++.+++ ++.+.-|.+|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId 67 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINID 67 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECC
Confidence 5688899999999999999999998875 3777777776
No 240
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.23 E-value=2.6e-06 Score=68.10 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=31.4
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
.+|++|+.||..|||+|+...+.|.++.+ .|+.|..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~~ 123 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LGITVRYLAF 123 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 57899999999999999999999988644 2577765543
No 241
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.22 E-value=1.5e-06 Score=68.47 Aligned_cols=43 Identities=16% Similarity=0.086 Sum_probs=38.5
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.++++|+.||..|||+|....+.+.++.+++.+ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 478999999999999999999999999999887 4888888775
No 242
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.20 E-value=9.3e-06 Score=62.49 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=40.6
Q ss_pred eecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC-CeEEEEEecC
Q 026028 101 VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ-GFEILAFPCN 150 (244)
Q Consensus 101 v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vi~Vs~D 150 (244)
+.+.+..++++|+.|+..+||+|....+.+.++.++|.+. +++++...+.
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 4456667899999999999999999999999999998332 3888877664
No 243
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.18 E-value=2.2e-06 Score=57.77 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=31.6
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.|+++|||+|....+.|+++.++++ ++.+..|++|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 677999999999999999999988764 4888888765
No 244
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.16 E-value=1.5e-06 Score=58.26 Aligned_cols=36 Identities=6% Similarity=0.074 Sum_probs=27.1
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
++.||++|||+|+...+.|+++.+++ ++.+..+.+|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 56799999999999999998887654 3444444444
No 245
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.15 E-value=1e-06 Score=61.92 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=30.0
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.+++|+.|+++||++|....+.|.++. .++.+.-|.+|
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 457888899999999998888887653 23788888876
No 246
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.09 E-value=8.3e-07 Score=69.54 Aligned_cols=40 Identities=18% Similarity=0.155 Sum_probs=34.2
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
++++||.|+..|||+|....|.+.++.+++ ++.+.-+.++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---CCeEEEEecc
Confidence 689999999999999999999999999998 3666666654
No 247
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.99 E-value=5.2e-06 Score=65.13 Aligned_cols=43 Identities=5% Similarity=0.049 Sum_probs=35.8
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D 150 (244)
.++++||.||..|||+|....+.+ .++.+++.+ ++.++.+.++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 457999999999999999999986 577777765 4888888776
No 248
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.91 E-value=1.6e-05 Score=61.29 Aligned_cols=42 Identities=5% Similarity=-0.042 Sum_probs=35.1
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
.++++|+.|+.-.||+|....+.+.++.+++.+. +.++.+.+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEec
Confidence 4689999999999999999999999999998765 55655544
No 249
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.90 E-value=4.2e-05 Score=65.65 Aligned_cols=92 Identities=8% Similarity=0.043 Sum_probs=62.7
Q ss_pred CEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCCc
Q 026028 109 KVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNT 188 (244)
Q Consensus 109 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~ 188 (244)
++++|.|++.||+.|....+.+.++.++|+++ +.++.|.+| . ++....+ +.+++. +.
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~--------~-~~~~~~~-~~fgi~----------~~-- 192 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD--------H-TDNQRIL-EFFGLK----------KE-- 192 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT--------S-GGGHHHH-HHTTCC----------TT--
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC--------h-HHHHHHH-HHcCCC----------cc--
Confidence 47788999999999999999999999999876 888888654 1 1233444 555541 00
Q ss_pred hhhHHHhhhccCCCcCCccccceeEEEECCCCcE-EEEc-CCCCChhhHH-HHHHHHh
Q 026028 189 APVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKV-IERY-PPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I-~~~~-~g~~~~~~l~-~i~~lL~ 243 (244)
..|++.+++.++.. .+.+ .+..+.+.+. .+++.++
T Consensus 193 --------------------~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 193 --------------------ECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp --------------------TCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHT
T ss_pred --------------------CCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhc
Confidence 02888888764432 2222 2667888888 8887764
No 250
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.86 E-value=2.6e-06 Score=71.33 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=28.7
Q ss_pred eeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHh
Q 026028 100 DVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKY 137 (244)
Q Consensus 100 ~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~ 137 (244)
.+.+.+.-++..+++||++|||+|+...|.++++.+++
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34454443444578999999999999999999887554
No 251
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.76 E-value=6.9e-05 Score=61.07 Aligned_cols=43 Identities=12% Similarity=0.157 Sum_probs=34.3
Q ss_pred CCEEEEEEecCC--CCCCHHhHHHHHHHHHHhhc-CC---eEEEEEecC
Q 026028 108 GKVLLIVNVASR--CGLTPSNYSELSHLYEKYKT-QG---FEILAFPCN 150 (244)
Q Consensus 108 gk~vll~F~~~~--C~~C~~~~~~l~~l~~~~~~-~~---~~vi~Vs~D 150 (244)
+++|+|.||+.| |++|+...+.+.++.+.+.. +| +.++.+..|
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 468999999999 99999999999999887532 22 777777655
No 252
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.62 E-value=6.8e-06 Score=65.00 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=38.1
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D 150 (244)
.++++||.||+.|||+|....|.+ .++.+++++ ++.+.-+.++
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 468999999999999999999998 999998875 4888888876
No 253
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.61 E-value=0.00011 Score=57.21 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=36.4
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHH-HHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSEL-SHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l-~~l~~~~~~~~~~vi~Vs~D 150 (244)
.+++++|.||..+||+|....+.+ .++.+++.+. +++..+.++
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecC
Confidence 467888999999999999999999 9999888754 777777765
No 254
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.57 E-value=0.00024 Score=53.38 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=28.7
Q ss_pred cCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEe
Q 026028 106 FKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFP 148 (244)
Q Consensus 106 ~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs 148 (244)
-.|+++|+.|...+||+|+...+.+.++ . ++.|+.+.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~ 48 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFM 48 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEE
Confidence 3578999999999999999999888654 3 36665543
No 255
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.45 E-value=8e-05 Score=58.44 Aligned_cols=43 Identities=9% Similarity=0.081 Sum_probs=36.1
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D 150 (244)
.++++|+.|+..+||+|....+.+ .++.+++.+. +.++.+.++
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 458999999999999999999987 6898988764 777777765
No 256
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.44 E-value=0.00017 Score=46.91 Aligned_cols=32 Identities=9% Similarity=0.173 Sum_probs=24.3
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
++.|+++||++|+...+.|+++ |+.+..+.+|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 5678999999999888877653 4666666665
No 257
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.41 E-value=4.5e-05 Score=53.42 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=23.7
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEE
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAF 147 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~V 147 (244)
|+.|+++|||+|+...+.|.++..+++ +++++-|
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi 47 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDI 47 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEG
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEc
Confidence 566999999999998888876544332 1455444
No 258
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.40 E-value=0.0022 Score=49.58 Aligned_cols=126 Identities=11% Similarity=0.040 Sum_probs=73.1
Q ss_pred CCcccceEEEcCCCCeeecC----CcCCCEEEEEEecCCCCCCHHhHHHH---HHHHHHhhcCCeEEEEEecCCCCCCCC
Q 026028 85 EKSLYDFTVKDIDGKDVPLS----KFKGKVLLIVNVASRCGLTPSNYSEL---SHLYEKYKTQGFEILAFPCNQFGGQEP 157 (244)
Q Consensus 85 g~~~pdf~l~~~~g~~v~L~----~~~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vi~Vs~D~~~~~~~ 157 (244)
|...|.|---+. .+-++.. .-.+|+++|+++.+||+.|......+ .++.+-+.+ ++.+.+.+++
T Consensus 29 g~~~p~F~~gs~-~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~------- 99 (178)
T 2ec4_A 29 GDCHPVFFIGSL-EAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLT------- 99 (178)
T ss_dssp CSCCCCCCCSCH-HHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECC-------
T ss_pred CCCCCCeeeCCH-HHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCC-------
Confidence 666677731111 1123333 44689999999999999888665433 233333433 5888888776
Q ss_pred CChHHHHHH---HHHhcCCCcceeeecCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCC---cEEEEcCCCCC
Q 026028 158 GSNPEIKEF---ACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNG---KVIERYPPTTS 231 (244)
Q Consensus 158 ~~~~~~~~~---~~~~~~~~~p~l~d~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G---~I~~~~~g~~~ 231 (244)
+.+....+ ..+..+. .+....+.+ .+...|...||+++| +++.+..|..+
T Consensus 100 -~~e~~~~~~~~~~~~~g~-------------~~a~~~~~~----------~~~~~P~l~ii~~~~~~~~vl~~~~G~~~ 155 (178)
T 2ec4_A 100 -KDSNRARFLTMCNRHFGS-------------VVAQTIRTQ----------KTDQFPLFLIIMGKRSSNEVLNVIQGNTT 155 (178)
T ss_dssp -SHHHHHHHHHHHHHHTCH-------------HHHHHHHHS----------CSTTCSEEEEECCCSSCCCEEEEECSCCC
T ss_pred -CchhhhhhhhhhhhhhHH-------------HHHHHHhhc----------CCCCCCeEEEEEcCCCceEEEEEEeCCCC
Confidence 44322222 2111110 011000000 134449999998764 78999999999
Q ss_pred hhhHH-HHHHHHh
Q 026028 232 PFQIE-DIQKLVV 243 (244)
Q Consensus 232 ~~~l~-~i~~lL~ 243 (244)
++++. .|.+.++
T Consensus 156 ~~~ll~~L~~~~e 168 (178)
T 2ec4_A 156 VDELMMRLMAAME 168 (178)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 99888 7776654
No 259
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.39 E-value=0.00029 Score=56.80 Aligned_cols=49 Identities=16% Similarity=0.122 Sum_probs=37.2
Q ss_pred ecCCcCCCEEEEEEecCCCCCCHHhHHHH-HHHHHHhhcC-CeEEEEEecC
Q 026028 102 PLSKFKGKVLLIVNVASRCGLTPSNYSEL-SHLYEKYKTQ-GFEILAFPCN 150 (244)
Q Consensus 102 ~L~~~~gk~vll~F~~~~C~~C~~~~~~l-~~l~~~~~~~-~~~vi~Vs~D 150 (244)
.+.+-.++++|+.|+...||+|....+.+ .++.++|.+. ++.++...+.
T Consensus 33 ~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 33 LLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred ccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 34445678999999999999999988864 7888888543 3777776653
No 260
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.28 E-value=0.0017 Score=44.54 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=23.1
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|..|..+|||+|...-..|.+ +|+.+.-+.+|
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~ 37 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIE 37 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcC
Confidence 556889999999976665543 45666667766
No 261
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.23 E-value=0.0029 Score=49.85 Aligned_cols=48 Identities=10% Similarity=0.106 Sum_probs=36.4
Q ss_pred cCCcCCCEEEEEEecCCCCCCHHhHHHH-HHHHHHhhcC-CeEEEEEecC
Q 026028 103 LSKFKGKVLLIVNVASRCGLTPSNYSEL-SHLYEKYKTQ-GFEILAFPCN 150 (244)
Q Consensus 103 L~~~~gk~vll~F~~~~C~~C~~~~~~l-~~l~~~~~~~-~~~vi~Vs~D 150 (244)
+.+-.++++|+.|+...||+|....+.+ ..+.++|.+. ++.++...+.
T Consensus 24 ~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 24 LGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred ecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 3444678999999999999999888876 5666778643 3788777653
No 262
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.10 E-value=0.00053 Score=45.29 Aligned_cols=32 Identities=9% Similarity=0.314 Sum_probs=24.8
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.|+++|||+|+...+.|.+ .++.+..|.+|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECC
Confidence 567999999999988777764 34667777776
No 263
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.10 E-value=0.0011 Score=48.54 Aligned_cols=30 Identities=3% Similarity=0.101 Sum_probs=21.9
Q ss_pred EEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 114 VNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 114 ~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.|+++|||+|+...+.|.++ ++.+..|.+|
T Consensus 31 vf~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid 60 (130)
T 2cq9_A 31 IFSKTSCSYCTMAKKLFHDM-------NVNYKVVELD 60 (130)
T ss_dssp EEECSSCSHHHHHHHHHHHH-------TCCCEEEETT
T ss_pred EEEcCCChHHHHHHHHHHHc-------CCCcEEEECc
Confidence 39999999999888888765 2344455555
No 264
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.08 E-value=0.00016 Score=51.68 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=24.1
Q ss_pred EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeE---EEEEecC
Q 026028 110 VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFE---ILAFPCN 150 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~---vi~Vs~D 150 (244)
..|+.|+++|||+|+...+.|.++ ++. +..|.+|
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~-------~~~~~~~~~vdi~ 55 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKF-------SFKRGAYEIVDIK 55 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTS-------CBCTTSEEEEEGG
T ss_pred CCEEEEEeCCChhHHHHHHHHHHc-------CCCcCceEEEEcc
Confidence 346679999999999877776543 344 5566665
No 265
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.83 E-value=0.0098 Score=47.45 Aligned_cols=91 Identities=7% Similarity=-0.008 Sum_probs=61.7
Q ss_pred EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCCch
Q 026028 110 VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTA 189 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~~~ 189 (244)
.+++.|...||+.|....+.+.++.++|+++ +.++.|..| . +.....+ +.+++.-
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~--------~-~~~~~~l-~~fgl~~-------------- 187 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSG--------M-KENGKVI-SFFKLKE-------------- 187 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETT--------S-GGGHHHH-HHTTCCG--------------
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCc--------c-HhHHHHH-HHcCCCc--------------
Confidence 4445566789999999999999999999887 777777654 1 1223344 5555420
Q ss_pred hhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEc-CCCCChhhHH-HHHHHHh
Q 026028 190 PVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERY-PPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~-~g~~~~~~l~-~i~~lL~ 243 (244)
...|.+.+++..+...+.+ .+..+.+.++ .++.+++
T Consensus 188 ------------------~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 188 ------------------SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp ------------------GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHT
T ss_pred ------------------ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhC
Confidence 0118888888665544444 3667888888 8888764
No 266
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.81 E-value=0.0015 Score=48.84 Aligned_cols=21 Identities=5% Similarity=0.208 Sum_probs=17.6
Q ss_pred EEEecCCCCCCHHhHHHHHHH
Q 026028 113 IVNVASRCGLTPSNYSELSHL 133 (244)
Q Consensus 113 l~F~~~~C~~C~~~~~~l~~l 133 (244)
+.|+++|||+|+...+.|.++
T Consensus 52 vvf~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 52 VIFSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEEECTTCHHHHHHHHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHHc
Confidence 339999999999888888765
No 267
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.80 E-value=0.0038 Score=48.13 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=34.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHH-HHHHHHhhcC-CeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSEL-SHLYEKYKTQ-GFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l-~~l~~~~~~~-~~~vi~Vs~D 150 (244)
.++++|+.|+...||+|....+.+ .++.++|.+. +++|+...+.
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 467889999999999999999998 5677888653 3777766553
No 268
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.43 E-value=0.0033 Score=43.77 Aligned_cols=23 Identities=22% Similarity=0.198 Sum_probs=18.8
Q ss_pred EEEEEecCCCCCCHHhHHHHHHH
Q 026028 111 LLIVNVASRCGLTPSNYSELSHL 133 (244)
Q Consensus 111 vll~F~~~~C~~C~~~~~~l~~l 133 (244)
.|+.|+.+|||+|+...+.|.++
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHHHc
Confidence 35569999999999888888764
No 269
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.24 E-value=0.012 Score=39.61 Aligned_cols=22 Identities=14% Similarity=0.119 Sum_probs=17.8
Q ss_pred EEEEecCCCCCCHHhHHHHHHH
Q 026028 112 LIVNVASRCGLTPSNYSELSHL 133 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l 133 (244)
|+.|+.+|||+|+.....|.++
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 4568899999999887777664
No 270
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.17 E-value=0.014 Score=38.79 Aligned_cols=34 Identities=6% Similarity=-0.026 Sum_probs=22.4
Q ss_pred EEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 111 LLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 111 vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
.|+.|+.+|||+|+.....|.++ +..++++-|..
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~-----~i~~~~~~vd~ 38 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN-----NIAFDETIIDD 38 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-----TCCCEEEECCS
T ss_pred EEEEEEcCCChhHHHHHHHHHHc-----CCCceEEEeec
Confidence 36678899999999877666543 12255555543
No 271
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=95.97 E-value=0.0085 Score=41.47 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=24.5
Q ss_pred EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 110 VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.-|+.|+.+|||+|......|.++ |+.+..|.+|
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~ 49 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCID 49 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred CCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcC
Confidence 345569999999999888888664 3455556655
No 272
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.77 E-value=0.0092 Score=42.66 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=22.2
Q ss_pred EEEEecCCCCCCHHh-HHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSN-YSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~-~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.|+.+|||+|+.. .+.|.++ ....+.+..|.+|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~----~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKL----KVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTS----CCCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHHc----CCCCCCeEEEECc
Confidence 455999999999977 4444332 2111666666666
No 273
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=95.71 E-value=0.011 Score=41.13 Aligned_cols=33 Identities=18% Similarity=0.377 Sum_probs=23.3
Q ss_pred EEEEEEec-----CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 110 VLLIVNVA-----SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 110 ~vll~F~~-----~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.|+| |+. +|||+|+...+.|.++ ++.+..+.+|
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~ 55 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 55 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECC
Confidence 4555 665 9999999888877664 3556666665
No 274
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=95.70 E-value=0.015 Score=38.00 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=22.9
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.|+.+|||+|+.....|.+. |+.+..+.+|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPID 34 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECC
Confidence 4568899999999887777653 3555555555
No 275
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.51 E-value=0.054 Score=36.09 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=18.0
Q ss_pred EEEEecCCCCCCHHhHHHHHHH
Q 026028 112 LIVNVASRCGLTPSNYSELSHL 133 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l 133 (244)
++.|+++|||+|+...+.|.+.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~ 29 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK 29 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 5668999999999887777653
No 276
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=95.46 E-value=0.012 Score=41.36 Aligned_cols=22 Identities=9% Similarity=0.273 Sum_probs=17.7
Q ss_pred EEEEecCCCCCCHHhHHHHHHH
Q 026028 112 LIVNVASRCGLTPSNYSELSHL 133 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l 133 (244)
|+.|+.+|||+|....+.|.++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 5559999999999887777653
No 277
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.35 E-value=0.079 Score=41.42 Aligned_cols=38 Identities=8% Similarity=-0.033 Sum_probs=30.1
Q ss_pred EEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 111 LLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 111 vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
.|.+|+..-||.|....+.|.++.++|.+ +++|.-...
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p~ 41 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVVG 41 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEEC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCC-CceEEEEec
Confidence 46667788999999999999999999864 466665553
No 278
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=95.27 E-value=0.021 Score=38.36 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=23.2
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
++.|+.+||++|+...+.|.+. |+.+..+.+|
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~ 39 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK-------GAEFNEIDAS 39 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEST
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 5668999999999877776542 4556666665
No 279
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.16 E-value=0.038 Score=38.63 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=23.6
Q ss_pred CEEEEEEec----CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 109 KVLLIVNVA----SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 109 k~vll~F~~----~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
..|+|+..+ +|||+|......|.++ |+.+..|.+|
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~ 53 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 53 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESS
T ss_pred CCEEEEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECC
Confidence 345554443 9999999877777543 5667777776
No 280
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.50 E-value=0.035 Score=40.26 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=15.8
Q ss_pred EEEEecCCCCCCHHh-HHHHHH
Q 026028 112 LIVNVASRCGLTPSN-YSELSH 132 (244)
Q Consensus 112 ll~F~~~~C~~C~~~-~~~l~~ 132 (244)
|+.|+.+|||+|... .+.|.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~ 60 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQE 60 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTT
T ss_pred EEEEECCCCCchHHHHHHHHHh
Confidence 566899999999977 555543
No 281
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.10 E-value=0.76 Score=37.64 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=28.4
Q ss_pred EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 110 VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
+.|..|...+||+|...-..|.++..++ ++..+.+.+|
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEE
Confidence 5677788999999998888888886653 4555566544
No 282
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.00 E-value=0.18 Score=35.33 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=21.1
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.|..++||.|.. ...-++..+-+.+.|+.+..|.++
T Consensus 10 V~vy~~~~C~~C~~-~~~~~~ak~~L~~~gi~y~~vdI~ 47 (111)
T 2ct6_A 10 IRVFIASSSGFVAI-KKKQQDVVRFLEANKIEFEEVDIT 47 (111)
T ss_dssp EEEEECSSCSCHHH-HHHHHHHHHHHHHTTCCEEEEETT
T ss_pred EEEEEcCCCCCccc-chhHHHHHHHHHHcCCCEEEEECC
Confidence 45678999999992 111111112223345667677766
No 283
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=93.99 E-value=0.41 Score=37.20 Aligned_cols=37 Identities=0% Similarity=-0.279 Sum_probs=29.1
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 206 LVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 206 ~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
+|.++|+++|+ .+|+.+....|..+.++++ .|+++++
T Consensus 173 gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 173 GISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred CCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 57788997765 5788766778888888888 8888775
No 284
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=93.78 E-value=0.14 Score=43.88 Aligned_cols=94 Identities=10% Similarity=0.058 Sum_probs=61.4
Q ss_pred CEEEEEEecCCCCCCHHhHHHHHHHHHHhhcC-CeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCC
Q 026028 109 KVLLIVNVASRCGLTPSNYSELSHLYEKYKTQ-GFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPN 187 (244)
Q Consensus 109 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~ 187 (244)
++.++.|+..+|+.|...+..|+++.++|+++ .+.++.|..+.+ ....+++.+.+++..
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~--------~~~l~~~~~~fgl~~------------ 307 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF--------PLLVPYWEKTFDIDL------------ 307 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC--------TTTHHHHHHHHTCCT------------
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc--------hhHHHHHHHhcCCCC------------
Confidence 45666688888888899999999999999985 388888876521 111222213444320
Q ss_pred chhhHHHhhhccCCCcCCccccceeEEEECCCCc--EEEEcCC---CCChhhHH-HHHHHHh
Q 026028 188 TAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGK--VIERYPP---TTSPFQIE-DIQKLVV 243 (244)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~--I~~~~~g---~~~~~~l~-~i~~lL~ 243 (244)
..|.+.+++.... ..+.+.+ ..+.+.++ .++++++
T Consensus 308 ---------------------~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~ 348 (367)
T 3us3_A 308 ---------------------SAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLE 348 (367)
T ss_dssp ---------------------TSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHH
T ss_pred ---------------------CCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHc
Confidence 0188889986544 3333443 56788888 8888764
No 285
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=93.66 E-value=0.07 Score=37.60 Aligned_cols=21 Identities=19% Similarity=0.202 Sum_probs=16.6
Q ss_pred EEEecCCCCCCHHhHHHHHHH
Q 026028 113 IVNVASRCGLTPSNYSELSHL 133 (244)
Q Consensus 113 l~F~~~~C~~C~~~~~~l~~l 133 (244)
+.|+.+|||+|......|.++
T Consensus 20 ~vy~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 20 VIFSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp EEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEcCCCCcHHHHHHHHHHc
Confidence 339999999999877777653
No 286
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=93.48 E-value=0.39 Score=40.59 Aligned_cols=42 Identities=5% Similarity=-0.057 Sum_probs=32.3
Q ss_pred CEEEEEEecCCCCCCHHhHHHHHHHHHHhhc-CCeEEEEEecC
Q 026028 109 KVLLIVNVASRCGLTPSNYSELSHLYEKYKT-QGFEILAFPCN 150 (244)
Q Consensus 109 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vi~Vs~D 150 (244)
+..++.|...+|+.|...++.++++.+++++ ..+.++.|..+
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~ 288 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD 288 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch
Confidence 3344558888998899999999999999985 34777777644
No 287
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.32 E-value=0.041 Score=45.29 Aligned_cols=40 Identities=8% Similarity=0.174 Sum_probs=31.9
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
.|+.+|+.|+...||+|+...+++.+..+. ..+.++.+.+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 578999999999999999999999976653 3366666554
No 288
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=93.22 E-value=0.28 Score=32.97 Aligned_cols=32 Identities=16% Similarity=0.035 Sum_probs=19.6
Q ss_pred EEEEecCCCCCC------HHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVASRCGLT------PSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~~C~~C------~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.|..++||.| ......| .+.|+.+..+.++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L-------~~~~i~~~~~di~ 41 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRIL-------DGKRIQYQLVDIS 41 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHH-------HHTTCCCEEEETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHH-------HHCCCceEEEECC
Confidence 455789999999 4333333 3345666666665
No 289
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=92.14 E-value=0.28 Score=38.39 Aligned_cols=49 Identities=14% Similarity=-0.056 Sum_probs=36.6
Q ss_pred eecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHH-HhhcC-CeEEEEEec
Q 026028 101 VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYE-KYKTQ-GFEILAFPC 149 (244)
Q Consensus 101 v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~-~~~~~-~~~vi~Vs~ 149 (244)
..+.+-.++++|+.|....||+|....+.+....+ +|.+. .+.++...+
T Consensus 8 ~~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 8 HLLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred ceecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 34455567899999999999999999888866555 77433 377877655
No 290
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=91.70 E-value=0.14 Score=39.33 Aligned_cols=43 Identities=14% Similarity=0.200 Sum_probs=34.2
Q ss_pred CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 107 KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
.++++|+.|....||+|....+.+.++.+++....+.++...+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 4678999999999999999999998888776222388877654
No 291
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=91.62 E-value=1.8 Score=30.81 Aligned_cols=35 Identities=14% Similarity=0.021 Sum_probs=27.1
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEE
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAF 147 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~V 147 (244)
.+++||-|+.+||..|. +.+.++.+.+ + ++.+..+
T Consensus 39 ~~v~VVGfF~~~~~~~~---~~F~~~A~~~-~-d~~F~~t 73 (124)
T 2l4c_A 39 TEVAVIGFFQDLEIPAV---PILHSMVQKF-P-GVSFGIS 73 (124)
T ss_dssp SSEEEEEECSCTTSTHH---HHHHHHHHHC-T-TSEEEEE
T ss_pred CCCEEEEEECCCCChhH---HHHHHHHHhC-C-CceEEEE
Confidence 46999999999999994 6778888887 3 3666544
No 292
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=90.67 E-value=0.16 Score=36.63 Aligned_cols=47 Identities=19% Similarity=0.437 Sum_probs=28.4
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHH
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFA 167 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~ 167 (244)
|+.|..+|||+|......|.+.+. + +..++++-|..+ .+.+++++++
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~-------~d~~~~~~~l 62 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKH-------GHGEELQEYI 62 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGS-------TTHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCC-------CCHHHHHHHH
Confidence 556889999999987777766310 1 122556655543 1345566665
No 293
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=90.06 E-value=0.66 Score=30.50 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=21.0
Q ss_pred EEEEecC----CCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 112 LIVNVAS----RCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 112 ll~F~~~----~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
|+.|+.+ |||.|......|++ .|+.+-.+.++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 4457889 99999977666654 34444455554
No 294
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=88.80 E-value=0.56 Score=33.34 Aligned_cols=52 Identities=10% Similarity=0.071 Sum_probs=34.8
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCc
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 175 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (244)
+..|..++|+.|+.....|.+ .|+.+-.+.++ .++.+.+++.++. ...+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~el~~~l-~~~~~~~ 53 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIM----TSPLSRDELLKIL-SYTENGT 53 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHH-HHCSSTH
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecc----cCCCcHHHHHHHH-hhcCCCH
Confidence 445678999999977776643 45555555554 2355889999998 5555543
No 295
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=88.56 E-value=0.37 Score=33.75 Aligned_cols=36 Identities=14% Similarity=0.302 Sum_probs=22.9
Q ss_pred CCCEEEEEEec-----CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVA-----SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~-----~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
+..+|+| |.. +|||+|......|.+ .|+.+..+.++
T Consensus 14 ~~~~Vvl-f~kg~~~~~~Cp~C~~ak~~L~~-------~gi~y~~~di~ 54 (111)
T 3zyw_A 14 HAAPCML-FMKGTPQEPRCGFSKQMVEILHK-------HNIQFSSFDIF 54 (111)
T ss_dssp TSSSEEE-EESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred hcCCEEE-EEecCCCCCcchhHHHHHHHHHH-------cCCCeEEEECc
Confidence 3445555 566 899999987777754 34445555554
No 296
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=88.33 E-value=0.94 Score=32.66 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=34.2
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCc
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 175 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (244)
|..|+.++|+.|+.....|.+ .|+.+-.+.++ ..+.+.+++.++. ++.+..+
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~----~~~~~~~el~~~l-~~~~~~~ 54 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIF----SEPLSIDEIKQIL-RMTEDGT 54 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHH-HTCSSCG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEcc----CCCccHHHHHHHH-HHcCCCH
Confidence 455778999999977776654 35555555554 2245678888887 5545543
No 297
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=88.32 E-value=4.4 Score=32.22 Aligned_cols=94 Identities=13% Similarity=-0.021 Sum_probs=54.0
Q ss_pred CCCEEEEEEecCCCCCCH----HhHHHHHHHHHHhhcC--CeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeee
Q 026028 107 KGKVLLIVNVASRCGLTP----SNYSELSHLYEKYKTQ--GFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDK 180 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~C~----~~~~~l~~l~~~~~~~--~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d 180 (244)
.+++++|.|+...+.-+. .....+.++.++|+++ .+.++.+..+ .. ...+ +.+++.-
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~--------~~---~~~~-~~fgl~~----- 190 (252)
T 2h8l_A 128 QGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--------TF---SHEL-SDFGLES----- 190 (252)
T ss_dssp SSSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--------TT---HHHH-GGGTCCC-----
T ss_pred cCCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchH--------HH---HHHH-HHcCCCC-----
Confidence 355566666643332222 3567778888899864 3667777543 11 2233 4445410
Q ss_pred cCCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcCCCCChhh--HH-HHHHHHh
Q 026028 181 VDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQ--IE-DIQKLVV 243 (244)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~g~~~~~~--l~-~i~~lL~ 243 (244)
+ +. ..|.+.|+|.+|+ .+.+.+..+.+. +. .++++++
T Consensus 191 -~--~~----------------------~~P~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 191 -T--AG----------------------EIPVVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp -C--SC----------------------SSCEEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHHH
T ss_pred -c--cC----------------------CCCEEEEEeCcCc-EecCCcccCcchHHHHHHHHHHHC
Confidence 0 00 0188888887665 455666667777 88 8887764
No 298
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=88.18 E-value=0.82 Score=32.51 Aligned_cols=55 Identities=16% Similarity=0.256 Sum_probs=36.3
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCccee
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIF 178 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l 178 (244)
+..|..++|+.|+.....|.+ +|+.+-.+.+. .++.+.+++.++. ++.+.++.-+
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~~~~~l 59 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIK----KNPPAASLIRNWL-ENSGLELKKF 59 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETT----TSCCCHHHHHHHH-HHSCCCGGGG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEec----cCchhHHHHHHHH-HHcCCCHHHH
Confidence 445668999999987777654 34444444443 2356889999998 6767654333
No 299
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=87.89 E-value=1 Score=31.98 Aligned_cols=26 Identities=12% Similarity=0.355 Sum_probs=17.1
Q ss_pred CCEEEEEEec----CCCCCCHHhHHHHHHH
Q 026028 108 GKVLLIVNVA----SRCGLTPSNYSELSHL 133 (244)
Q Consensus 108 gk~vll~F~~----~~C~~C~~~~~~l~~l 133 (244)
...|+|+--. +|||+|......|++.
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHc
Confidence 3455553334 3999999887777664
No 300
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=87.61 E-value=0.41 Score=34.88 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=22.1
Q ss_pred EEEEEEec----CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 110 VLLIVNVA----SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 110 ~vll~F~~----~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.|+|+.++ +|||+|......|.+ .|+.+..|.++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAA-------CGERFAYVDIL 73 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHH-------cCCceEEEECC
Confidence 45554554 899999977766644 34555566665
No 301
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=86.78 E-value=2.2 Score=30.35 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=28.1
Q ss_pred EEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhc
Q 026028 111 LLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRF 171 (244)
Q Consensus 111 vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~ 171 (244)
||..|..+.||.|..- ..=.+...-+..+|+.+--+.++ ..++.++++.++.
T Consensus 1 ~V~vYtt~~c~~c~~k-k~c~~aK~lL~~kgV~feEidI~--------~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIK-KKQQDVLGFLEANKIGFEEKDIA--------ANEENRKWMRENV 52 (121)
T ss_dssp CEEEEECTTCSCHHHH-HHHHHHHHHHHHTTCCEEEEECT--------TCHHHHHHHHHHS
T ss_pred CEEEEecCCCCCccch-HHHHHHHHHHHHCCCceEEEECC--------CCHHHHHHHHHhc
Confidence 3566779999999511 11112222234566777667665 3344555553453
No 302
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=86.37 E-value=0.62 Score=33.03 Aligned_cols=23 Identities=13% Similarity=0.343 Sum_probs=15.6
Q ss_pred CEEEEEEecC-----CCCCCHHhHHHHHH
Q 026028 109 KVLLIVNVAS-----RCGLTPSNYSELSH 132 (244)
Q Consensus 109 k~vll~F~~~-----~C~~C~~~~~~l~~ 132 (244)
..|+| |..+ |||+|......|++
T Consensus 20 ~~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~ 47 (118)
T 2wem_A 20 DKVVV-FLKGTPEQPQCGFSNAVVQILRL 47 (118)
T ss_dssp SSEEE-EESBCSSSBSSHHHHHHHHHHHH
T ss_pred CCEEE-EEecCCCCCccHHHHHHHHHHHH
Confidence 45555 5543 99999977766654
No 303
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=85.62 E-value=0.86 Score=32.37 Aligned_cols=54 Identities=9% Similarity=-0.014 Sum_probs=35.4
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcce
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPI 177 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~ 177 (244)
|..|..++|+.|+.....|.+ +|+.+-.+.+. .++.+.+++.++. ++.+.++.-
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~~~~~ 59 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIV----DDNPTVEELKAWI-PLSGLPVKK 59 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT----TTCCCHHHHHHHH-HHHTSCGGG
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecc----cCcCCHHHHHHHH-HHcCCCHHH
Confidence 345668999999977776643 44444444443 2256889999998 666655433
No 304
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=85.50 E-value=2.5 Score=33.36 Aligned_cols=35 Identities=23% Similarity=0.050 Sum_probs=25.2
Q ss_pred cccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHH
Q 026028 207 VKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKL 241 (244)
Q Consensus 207 i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~l 241 (244)
|...|+.+|++++|++..........+.+. .|+++
T Consensus 203 v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 203 VTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp CCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred CCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 566699999999999988765555555555 55544
No 305
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=83.09 E-value=1.2 Score=30.81 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=21.3
Q ss_pred CCEEEEEEec-----CCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 108 GKVLLIVNVA-----SRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 108 gk~vll~F~~-----~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
...|+| |.. +|||+|......|.+. |+.+-.+.++
T Consensus 17 ~~~Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~-------gi~~~~~dI~ 56 (109)
T 3ipz_A 17 SEKVVL-FMKGTRDFPMCGFSNTVVQILKNL-------NVPFEDVNIL 56 (109)
T ss_dssp SSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred cCCEEE-EEecCCCCCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 345555 454 3999999777777553 4444455554
No 306
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=82.92 E-value=1.1 Score=31.89 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=34.2
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKA 173 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~ 173 (244)
+..|...+|+.|+.....|. ++|+.+-.+.+. .++.+.+++.++. +..+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVE-------QQGITPQVVLYL----ETPPSVDKLKELL-QQLGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------TTTCCCEEECTT----TSCCCHHHHHHHH-HHTTC
T ss_pred EEEEECCCCHHHHHHHHHHH-------HcCCCcEEEeec----cCCCcHHHHHHHH-HhcCC
Confidence 44566899999997776664 345555555443 2356889999998 66665
No 307
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=82.36 E-value=1.1 Score=31.48 Aligned_cols=49 Identities=4% Similarity=0.024 Sum_probs=31.0
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFK 172 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 172 (244)
|..|..++|+.|+.....|.+ +|+.+-.+.++ .++.+.++++++. ++.+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~----~~~~~~~~l~~~~-~~~g 50 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYK----AVGIDREHLRRWC-AEHG 50 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHH----HHCCCHHHHHHHH-HHHC
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeec----CCCCCHHHHHHHH-HhCC
Confidence 345678999999977776654 34444444443 1134668888888 5545
No 308
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=80.91 E-value=14 Score=26.85 Aligned_cols=91 Identities=8% Similarity=-0.043 Sum_probs=50.3
Q ss_pred CEEEEEEecC-CCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeecCCCCCC
Q 026028 109 KVLLIVNVAS-RCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPN 187 (244)
Q Consensus 109 k~vll~F~~~-~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~d~~~~~ 187 (244)
.++++.++.. .-.--....+.+.++.++|+++ +.++.|..+ .+.....+ +.+|+.-.
T Consensus 32 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-i~Fv~vd~~---------~~~~~~~l-~~fGl~~~----------- 89 (147)
T 3bj5_A 32 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFAFIDSD---------HTDNQRIL-EFFGLKKE----------- 89 (147)
T ss_dssp CCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-CEEEEECTT---------CGGGHHHH-HHTTCCGG-----------
T ss_pred CceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-eEEEEEecc---------hHhHHHHH-HHcCCCcc-----------
Confidence 3444443432 2223334568889999999875 667777542 11222333 45554210
Q ss_pred chhhHHHhhhccCCCcCCccccceeEEEECC--CCcEEEEcC-CCCChhhHH-HHHHHHh
Q 026028 188 TAPVYQFLKSSAGGFLGDLVKWNFEKFLVDK--NGKVIERYP-PTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~--~G~I~~~~~-g~~~~~~l~-~i~~lL~ 243 (244)
-.|.+.|+|. +++ .+.+. +..+++.++ .++++++
T Consensus 90 ---------------------~~P~v~i~~~~~~~~-Ky~~~~~~~t~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 90 ---------------------ECPAVRLITLEEEMT-KYKPESEELTAERITEFCHRFLE 127 (147)
T ss_dssp ---------------------GCSEEEEEECSSSCE-EECCSCCCCCHHHHHHHHHHHHT
T ss_pred ---------------------cCCEEEEEecccccc-cCCCCcccCCHHHHHHHHHHHHc
Confidence 0177778874 333 24433 667788888 8887764
No 309
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=80.78 E-value=1.4 Score=31.07 Aligned_cols=50 Identities=6% Similarity=0.038 Sum_probs=32.0
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKA 173 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~ 173 (244)
|..|..++|+.|+.....|.+. +..++++-|.-| +.+.++++++. ++.++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-----gi~y~~~di~~~------~~~~~~l~~~~-~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-----GIDYTFHDYKKE------GLDAETLDRFL-KTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCEEEEEHHHH------CCCHHHHHHHH-HHSCG
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCcEEEEeeeCC------CCCHHHHHHHH-HHcCh
Confidence 4456789999999777777552 222444444323 34678888888 56663
No 310
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=79.05 E-value=1.4 Score=32.22 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=33.0
Q ss_pred EEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCC
Q 026028 113 IVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAE 174 (244)
Q Consensus 113 l~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~ 174 (244)
..|..++|+.|+.....|.+ +|+.+-.+.++ ..+.+.+++.++. .+.+.+
T Consensus 5 tiY~~p~C~~crkak~~L~~-------~gi~~~~idi~----~~~~~~~eL~~~~-~~~g~p 54 (141)
T 1s3c_A 5 TIYHNPASGTSRNTLEMIRN-------SGTEPTIILYL----ENPPSRDELVKLI-ADMGIS 54 (141)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECTT----TSCCCHHHHHHHH-HHHTSC
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCCEEEEECC----CCCccHHHHHHHh-cccCCC
Confidence 35668999999977766644 45555555554 2245788888888 555553
No 311
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=76.54 E-value=2.3 Score=30.01 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=29.1
Q ss_pred CEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCC
Q 026028 109 KVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQ 151 (244)
Q Consensus 109 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~ 151 (244)
|.+||-|..+.|+.|...-..|.++ +++ .+|+-|++=.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~l----ede-Y~ilrVNIlS 39 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEEL----KSE-YDILHVDILS 39 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTT----TTT-EEEEEEECCC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHh----hcc-ccEEEEEeee
Confidence 5789999999999999877777444 444 6788887643
No 312
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=75.56 E-value=7.5 Score=30.86 Aligned_cols=91 Identities=7% Similarity=0.039 Sum_probs=51.4
Q ss_pred CCCEEEEEEec-CCC---CCC-HHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceeeec
Q 026028 107 KGKVLLIVNVA-SRC---GLT-PSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKV 181 (244)
Q Consensus 107 ~gk~vll~F~~-~~C---~~C-~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~d~ 181 (244)
.|+++++.|+. .++ ..+ ......+.++.++|+ + +.++.+..+ .. ...+ +.+++.-
T Consensus 131 ~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-k-i~F~~~d~~--------~~---~~~l-~~fgl~~------ 190 (250)
T 3ec3_A 131 SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-E-YTFAIADEE--------DY---ATEV-KDLGLSE------ 190 (250)
T ss_dssp CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-T-SEEEEEETT--------TT---HHHH-HHTTCSS------
T ss_pred ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-c-eeEEEEcHH--------HH---HHHH-HHcCCCc------
Confidence 46776666663 333 222 335677888888888 3 777776533 11 2233 3444420
Q ss_pred CCCCCCchhhHHHhhhccCCCcCCccccceeEEEECCCCcEEEEcC-CCCChhhHH-HHHHHHh
Q 026028 182 DVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYP-PTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lID~~G~I~~~~~-g~~~~~~l~-~i~~lL~ 243 (244)
.+. .|..+++|.+|+ .+.+. +..+.+.++ .++.+++
T Consensus 191 --~~~-----------------------~p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 191 --SGG-----------------------DVNAAILDESGK-KFAMEPEEFDSDALREFVMAFKK 228 (250)
T ss_dssp --CSC-----------------------SCEEEEECTTSC-EEECCCCSCCHHHHHHHHHHHHT
T ss_pred --cCC-----------------------CcEEEEEcCCCc-eecCCcccCCHHHHHHHHHHHHC
Confidence 000 056778886664 34444 556788888 8887764
No 313
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=73.81 E-value=8.1 Score=32.76 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=25.4
Q ss_pred CCCEEEEEEecCCCCC-CHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 107 KGKVLLIVNVASRCGL-TPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 107 ~gk~vll~F~~~~C~~-C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
.+++++|.|+..+|.. |......+.+...++++ .+.++.|..+
T Consensus 235 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~ 278 (382)
T 2r2j_A 235 EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCD 278 (382)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETT
T ss_pred CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchH
Confidence 3567878888777642 33333455555555554 3777777643
No 314
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=71.41 E-value=5.8 Score=28.06 Aligned_cols=56 Identities=16% Similarity=0.261 Sum_probs=37.5
Q ss_pred cCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCccee
Q 026028 106 FKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIF 178 (244)
Q Consensus 106 ~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l 178 (244)
|+|.+|||++-.-- . . ..+.++.+.+...|+.+|||.-. +.+.+++.+ ...++ |++
T Consensus 45 F~~aPVVlDl~~l~-~--~---~dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a-~~~GL--p~l 100 (120)
T 3ghf_A 45 LKHAPVVINVSGLE-S--P---VNWPELHKIVTSTGLRIIGVSGC--------KDASLKVEI-DRMGL--PLL 100 (120)
T ss_dssp HTTCEEEEEEEECC-S--S---CCHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHH-HHHTC--CEE
T ss_pred hCCCcEEEEccccC-C--h---HHHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHH-HHCCC--Ccc
Confidence 57889999986432 1 1 24667777778889999999842 345566766 55454 444
No 315
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=70.87 E-value=3 Score=32.88 Aligned_cols=23 Identities=9% Similarity=0.104 Sum_probs=17.5
Q ss_pred EEEEEEecCCCCCCHHhHHHHHH
Q 026028 110 VLLIVNVASRCGLTPSNYSELSH 132 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~ 132 (244)
..++.|..+|||.|......|++
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHH
T ss_pred ceEEEEECCCChHHHHHHHHHHH
Confidence 44566889999999977776654
No 316
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=69.40 E-value=2.3 Score=30.00 Aligned_cols=51 Identities=10% Similarity=0.231 Sum_probs=33.7
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCC
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAE 174 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~ 174 (244)
+..|...+|+.|+.....|.+ .+..++++-|.-| +.+.+++.+|. ++.+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-----~gi~~~~~di~~~------~~t~~eL~~~l-~~~g~~ 56 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-----QGIAPQVIKYLET------SPSVEELKRLY-QQLGLN 56 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-----TTCCCEEECHHHH------CCCHHHHHHHH-HHHTCS
T ss_pred EEEEECCCChHHHHHHHHHHH-----cCCceEEEEeccC------cCcHHHHHHHH-HHcCCc
Confidence 344668899999987777654 1222455555433 45889999998 666654
No 317
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=69.02 E-value=49 Score=30.35 Aligned_cols=38 Identities=13% Similarity=0.179 Sum_probs=30.5
Q ss_pred ccccCCcccceEEEcC-CCCeeecCC-c--CCCEEEEEEecC
Q 026028 81 TAATEKSLYDFTVKDI-DGKDVPLSK-F--KGKVLLIVNVAS 118 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~-~g~~v~L~~-~--~gk~vll~F~~~ 118 (244)
....|..+|++.+... +|+++.|.+ + .|+++||.|-..
T Consensus 478 ~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~ 519 (665)
T 1pn0_A 478 NCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGK 519 (665)
T ss_dssp TSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEEC
T ss_pred CCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCC
Confidence 4568999999999874 888888888 4 368999988653
No 318
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=65.12 E-value=11 Score=29.90 Aligned_cols=42 Identities=10% Similarity=0.184 Sum_probs=30.8
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhc-CCeEEEEEec
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKT-QGFEILAFPC 149 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vi~Vs~ 149 (244)
||..|-+|+..-||.|-.-.+.|.++.++|.+ .+++|.-..+
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~ 43 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSF 43 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEEC
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEe
Confidence 45554445577999999999999999988864 4677766554
No 319
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=61.02 E-value=1.1 Score=23.19 Aligned_cols=21 Identities=10% Similarity=0.085 Sum_probs=17.5
Q ss_pred CCCCCHHhHHHHHHHHHHhhc
Q 026028 119 RCGLTPSNYSELSHLYEKYKT 139 (244)
Q Consensus 119 ~C~~C~~~~~~l~~l~~~~~~ 139 (244)
-|+.|+.++|..+.+..-|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 499999999999888777654
No 320
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=60.79 E-value=33 Score=26.41 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=26.5
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEE
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAF 147 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~V 147 (244)
.+++||-|+++| |....+.+.++.+.+. .+.+...
T Consensus 27 ~~v~vVgff~~~---~~~~~~~f~~~A~~l~--~~~F~~t 61 (227)
T 4f9z_D 27 TEVAVIGFFQDL---EIPAVPILHSMVQKFP--GVSFGIS 61 (227)
T ss_dssp SSEEEEEECSCS---CSTHHHHHHHHTTTCT--TSEEEEE
T ss_pred CCeEEEEEecCC---CchhHHHHHHHHHhCC--CceEEEE
Confidence 468999999988 4567788888888884 3666543
No 321
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=58.74 E-value=8.6 Score=27.09 Aligned_cols=22 Identities=14% Similarity=0.401 Sum_probs=12.9
Q ss_pred CEEEEEEe-c----CCCCCCHHhHHHHH
Q 026028 109 KVLLIVNV-A----SRCGLTPSNYSELS 131 (244)
Q Consensus 109 k~vll~F~-~----~~C~~C~~~~~~l~ 131 (244)
.+||| |. + +.||+|......|.
T Consensus 20 ~~Vvv-F~Kgt~~~P~C~fc~~ak~lL~ 46 (118)
T 2wul_A 20 DKVVV-FLKGTPEQPQCGFSNAVVQILR 46 (118)
T ss_dssp SSEEE-EESBCSSSBSSHHHHHHHHHHH
T ss_pred CCEEE-EEcCCCCCCCCHHHHHHHHHHH
Confidence 45555 44 2 36888876655553
No 322
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=57.85 E-value=11 Score=29.19 Aligned_cols=33 Identities=12% Similarity=0.010 Sum_probs=25.3
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHhC
Q 026028 206 LVKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVVA 244 (244)
Q Consensus 206 ~i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~~ 244 (244)
+|.++|+++| +|+. +.|..+.++++ .|++++++
T Consensus 165 GV~GtPtfvv---ng~~---~~G~~~~e~l~~~i~~~~~~ 198 (205)
T 3gmf_A 165 NVSGTPSFMI---DGIL---LAGTHDWASLRPQILARLNE 198 (205)
T ss_dssp CCCSSSEEEE---TTEE---CTTCCSHHHHHHHHHHHHTC
T ss_pred CCccCCEEEE---CCEE---EeCCCCHHHHHHHHHHHhhc
Confidence 3777898766 6764 67888899999 88888764
No 323
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=53.86 E-value=35 Score=22.58 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=21.8
Q ss_pred CCCeeecCCcCCCEEEEEEecCCCCCCHHhHHHHH
Q 026028 97 DGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELS 131 (244)
Q Consensus 97 ~g~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~ 131 (244)
||..+.|-++++..|.|.+-+. |..|....-.|+
T Consensus 26 dGGdvelv~v~~g~V~V~L~Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLHGA-CGTCPSSTITLK 59 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEESS-CCSSCHHHHHHH
T ss_pred cCCeEEEEEEECCEEEEEEeec-CCCCcchHHHHH
Confidence 5666677777667777777654 666765554444
No 324
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=53.21 E-value=5.2 Score=34.11 Aligned_cols=17 Identities=12% Similarity=0.339 Sum_probs=12.5
Q ss_pred EEEEecCCCCCCHHhHH
Q 026028 112 LIVNVASRCGLTPSNYS 128 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~ 128 (244)
|+.|..+|||+|.....
T Consensus 263 VvVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 263 IFVASKTYCPYSHAALN 279 (362)
T ss_dssp EEEEECTTCHHHHHHHH
T ss_pred EEEEEcCCCcchHHHHH
Confidence 34477899999996554
No 325
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=51.90 E-value=83 Score=24.52 Aligned_cols=36 Identities=6% Similarity=0.026 Sum_probs=26.1
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEE
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAF 147 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~V 147 (244)
.+++||-|+..| |......+.++.+.+++. +.+..+
T Consensus 24 ~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~-~~F~~~ 59 (252)
T 2h8l_A 24 KDASIVGFFDDS---FSEAHSEFLKAASNLRDN-YRFAHT 59 (252)
T ss_dssp SSCEEEEEESCT---TSHHHHHHHHHHHHTTTT-SCEEEE
T ss_pred CCeEEEEEECCC---CChHHHHHHHHHHhcccC-cEEEEE
Confidence 357778888877 566778889999888665 655544
No 326
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=50.22 E-value=22 Score=22.74 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=27.5
Q ss_pred CC-CeeecCCcCCCEEEEEEecCCCCCCHHhHHHHHHHH-HHhhc
Q 026028 97 DG-KDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLY-EKYKT 139 (244)
Q Consensus 97 ~g-~~v~L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~-~~~~~ 139 (244)
|| ..+.+-++++..+.|.+-+. |..|......+++.. +++++
T Consensus 23 dGGGdvelv~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~~~vpe 66 (74)
T 1th5_A 23 TGGGGLQFLMIKGPIVKVRLTGP-AAVVRTVRIAVSKKLREKIPS 66 (74)
T ss_dssp TTCCCCCCCEEETTEEEECCCSS-SSSSSSHHHHHHHHHHHHCTT
T ss_pred cCCCcEEEEEEeCCEEEEEEecC-CcchHHHHHHHHHHHHHHCCC
Confidence 55 67777777777777777765 888965555565443 34443
No 327
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=48.03 E-value=74 Score=27.93 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=25.6
Q ss_pred ccccCCcccceEEEcCCCCeeecCCcCCC-EEEEEE
Q 026028 81 TAATEKSLYDFTVKDIDGKDVPLSKFKGK-VLLIVN 115 (244)
Q Consensus 81 ~~~~g~~~pdf~l~~~~g~~v~L~~~~gk-~vll~F 115 (244)
....|..+|+.-+.. +|+.+++-|+-|+ .+||.+
T Consensus 419 ~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~~ 453 (535)
T 3ihg_A 419 SGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLAG 453 (535)
T ss_dssp CCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEEC
T ss_pred CCCCCCcCCCceeec-CCceeeHHHhcCCceEEEec
Confidence 456899999998854 5777888887564 888764
No 328
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=46.14 E-value=63 Score=21.46 Aligned_cols=16 Identities=25% Similarity=0.301 Sum_probs=12.8
Q ss_pred eeEEEECCCCcEEEEc
Q 026028 211 FEKFLVDKNGKVIERY 226 (244)
Q Consensus 211 P~~~lID~~G~I~~~~ 226 (244)
...++.|++|.++..+
T Consensus 118 ~~~~~~DPdG~~iel~ 133 (134)
T 3l7t_A 118 KMAFFFDPDGLPLELH 133 (134)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEe
Confidence 4679999999987653
No 329
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=45.31 E-value=99 Score=26.24 Aligned_cols=43 Identities=16% Similarity=0.320 Sum_probs=32.0
Q ss_pred HHhHHHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCc
Q 026028 124 PSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 175 (244)
Q Consensus 124 ~~~~~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (244)
....|.+.+|.+.++++|+.++-||-. ..+-++.++ ++.++.|
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg--------~~~~v~~ia-~~lg~~y 262 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSAS--------FIDIVRAFA-TDTNNNY 262 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHH-HCTTSSC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCC--------cHHHHHHHH-HHhCccc
Confidence 346689999999999999999999854 455566666 6655443
No 330
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=44.63 E-value=18 Score=25.67 Aligned_cols=32 Identities=22% Similarity=0.143 Sum_probs=22.1
Q ss_pred eeEEEECCCCcEEEEcC-CCCChhhHH-HHHHHH
Q 026028 211 FEKFLVDKNGKVIERYP-PTTSPFQIE-DIQKLV 242 (244)
Q Consensus 211 P~~~lID~~G~I~~~~~-g~~~~~~l~-~i~~lL 242 (244)
|.+.++|.+|+++.+.. ..-+.++++ .|++-|
T Consensus 63 P~LvLlD~~Ge~~E~I~IekW~tD~I~efL~ekL 96 (126)
T 2a4h_A 63 PVVKLLDASGKVQETLSITKWNTDTVEEFFETHL 96 (126)
T ss_dssp CEEEECCSSSCCSEEEECSSSSCSHHHHHHHHHS
T ss_pred CEEEEecCCCCEeeEeccccCCHHHHHHHHHHHh
Confidence 89999999999877653 334555666 555443
No 331
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=43.53 E-value=18 Score=32.55 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.1
Q ss_pred EEEEecCCCCCCHHhHHHHHH
Q 026028 112 LIVNVASRCGLTPSNYSELSH 132 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~ 132 (244)
|+.|..+|||+|......|++
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 455889999999976666654
No 332
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=41.77 E-value=24 Score=26.69 Aligned_cols=33 Identities=15% Similarity=0.034 Sum_probs=25.9
Q ss_pred EEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEE
Q 026028 112 LIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAF 147 (244)
Q Consensus 112 ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~V 147 (244)
|.+|+-.-||.|....+.|.++.++++ ++|.-.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~---~~v~~~ 35 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG---LTIRYN 35 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC---CEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC---CeEEEE
Confidence 455668899999999999999999884 444443
No 333
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=41.46 E-value=14 Score=18.13 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=12.8
Q ss_pred eEEEECCCCcEEEEc
Q 026028 212 EKFLVDKNGKVIERY 226 (244)
Q Consensus 212 ~~~lID~~G~I~~~~ 226 (244)
+..|.|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 468999999998875
No 334
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=41.16 E-value=23 Score=24.81 Aligned_cols=14 Identities=14% Similarity=0.209 Sum_probs=6.4
Q ss_pred cCCCEEEEEEecCC
Q 026028 106 FKGKVLLIVNVASR 119 (244)
Q Consensus 106 ~~gk~vll~F~~~~ 119 (244)
++||++.++-.+.|
T Consensus 77 l~~k~~~~f~t~g~ 90 (138)
T 5nul_A 77 ISGKKVALFGSYGW 90 (138)
T ss_dssp CTTCEEEEEEEESS
T ss_pred cCCCEEEEEEecCC
Confidence 45555444333344
No 335
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=40.17 E-value=77 Score=20.78 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=12.1
Q ss_pred eeEEEECCCCcEEEE
Q 026028 211 FEKFLVDKNGKVIER 225 (244)
Q Consensus 211 P~~~lID~~G~I~~~ 225 (244)
...++.||+|.++..
T Consensus 110 ~~~~~~DPdG~~iel 124 (126)
T 2p25_A 110 KMTFFFDPDGLPLEL 124 (126)
T ss_dssp EEEEEECTTCCEEEE
T ss_pred EEEEEECCCCCEEEe
Confidence 457899999998765
No 336
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=39.69 E-value=1.3e+02 Score=23.33 Aligned_cols=36 Identities=6% Similarity=0.138 Sum_probs=25.7
Q ss_pred CCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEE
Q 026028 108 GKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAF 147 (244)
Q Consensus 108 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~V 147 (244)
.+++||-|+..+ |......+.++.+++++. +.+..+
T Consensus 25 ~~v~vVgff~~~---~~~~~~~F~~~A~~lr~~-~~F~~t 60 (250)
T 3ec3_A 25 DDVVILGVFQGV---GDPGYLQYQDAANTLRED-YKFHHT 60 (250)
T ss_dssp SSCEEEEECSCT---TCHHHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEEEEcCC---CchHHHHHHHHHHhhhcC-cEEEEE
Confidence 457788888876 456778888888888665 555444
No 337
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=39.01 E-value=4 Score=22.03 Aligned_cols=19 Identities=16% Similarity=0.468 Sum_probs=12.4
Q ss_pred CCCCHHhHHHHHHHHHHhh
Q 026028 120 CGLTPSNYSELSHLYEKYK 138 (244)
Q Consensus 120 C~~C~~~~~~l~~l~~~~~ 138 (244)
||.|+..+..-.+|..-|+
T Consensus 8 CP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp CTTTCCEESSHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHH
Confidence 9999877655555554443
No 338
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=36.90 E-value=31 Score=27.11 Aligned_cols=32 Identities=3% Similarity=-0.234 Sum_probs=22.7
Q ss_pred cccceeEEEECCCCcEEEEcCCCCChhhHH-HHHHHHh
Q 026028 207 VKWNFEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLVV 243 (244)
Q Consensus 207 i~~~P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL~ 243 (244)
|.++|+++| +|+. ...|..+++.+. .|+++++
T Consensus 181 v~GvPtfvv---~g~~--~v~Ga~~~e~~~~~i~~~~~ 213 (239)
T 3gl5_A 181 ATGVPFFVL---DRAY--GVSGAQPAEVFTQALTQAWG 213 (239)
T ss_dssp CCSSSEEEE---TTTE--EEESSCCHHHHHHHHHHHHH
T ss_pred CCeeCeEEE---CCcE--eecCCCCHHHHHHHHHHHHh
Confidence 677797665 4652 335777888888 8888875
No 339
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=35.36 E-value=47 Score=26.50 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=22.7
Q ss_pred cCCcCCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEec
Q 026028 103 LSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPC 149 (244)
Q Consensus 103 L~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~ 149 (244)
+-+++||.+|| .+...-.-. .+.++|.+.|..|+....
T Consensus 4 ~f~L~gKvalV------TGas~GIG~---aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 4 LFDLTGKTALV------TGSARGLGF---AYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TTCCTTCEEEE------TTCSSHHHH---HHHHHHHHTTCEEEECCS
T ss_pred CcCCCCCEEEE------eCCCcHHHH---HHHHHHHHCCCEEEEEEC
Confidence 34678998888 344443322 344455667777777654
No 340
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=34.16 E-value=24 Score=25.25 Aligned_cols=26 Identities=23% Similarity=0.217 Sum_probs=18.2
Q ss_pred eeEEEECCCCcEEEEc-CCCCChhhHH
Q 026028 211 FEKFLVDKNGKVIERY-PPTTSPFQIE 236 (244)
Q Consensus 211 P~~~lID~~G~I~~~~-~g~~~~~~l~ 236 (244)
|.++|+|.+|+++.+. ....+.++++
T Consensus 57 P~LvL~D~~G~e~E~I~Iekw~~d~I~ 83 (129)
T 2a2p_A 57 PELVLLSRNYQELERIPLSQMTRDEIN 83 (129)
T ss_dssp CEEEEECSSSCCCEEEECSSSCHHHHH
T ss_pred CEEEEecCCCCEEEEeecccCCHHHHH
Confidence 8999999999987664 2333455555
No 341
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=33.74 E-value=25 Score=27.17 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=26.5
Q ss_pred EEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEe
Q 026028 110 VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFP 148 (244)
Q Consensus 110 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs 148 (244)
..|.+|+-.-||.|....+.|.++.+++ +++|.-..
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~p 41 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLRP 41 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 4455666789999999999999987655 45555443
No 342
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=31.73 E-value=1.1e+02 Score=23.31 Aligned_cols=59 Identities=14% Similarity=0.135 Sum_probs=35.3
Q ss_pred cccce-EEEcCCCCeeecCCc----CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 87 SLYDF-TVKDIDGKDVPLSKF----KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 87 ~~pdf-~l~~~~g~~v~L~~~----~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
+..++ .+.+.+|..+....+ +++++||.+.+..+. .. .+..+.+.+.++|+.|+.+..-
T Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~--~~---~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 15 PYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEH--SG---RYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp BGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCC--GG---GGHHHHHHHHHTTEEEEEECCT
T ss_pred ccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCch--hh---HHHHHHHHHHhCCCcEEEeCCC
Confidence 34445 677778877655433 346888877764432 11 2334455556668999988764
No 343
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=30.21 E-value=36 Score=21.67 Aligned_cols=35 Identities=9% Similarity=0.197 Sum_probs=23.4
Q ss_pred CcCCCEEEE-EEecCCCCCCH------HhHHHHHHHHHHhhc
Q 026028 105 KFKGKVLLI-VNVASRCGLTP------SNYSELSHLYEKYKT 139 (244)
Q Consensus 105 ~~~gk~vll-~F~~~~C~~C~------~~~~~l~~l~~~~~~ 139 (244)
+++|+.++| +..+.+|+.|- .....+.++..+|+.
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 468887777 44688899884 445556666666654
No 344
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=29.09 E-value=1.1e+02 Score=27.69 Aligned_cols=50 Identities=22% Similarity=0.113 Sum_probs=35.7
Q ss_pred cccCCcccceEEEc-CCCCeeecCC-c--CCCEEEEEEecCCCCCCH-HhHHHHH
Q 026028 82 AATEKSLYDFTVKD-IDGKDVPLSK-F--KGKVLLIVNVASRCGLTP-SNYSELS 131 (244)
Q Consensus 82 ~~~g~~~pdf~l~~-~~g~~v~L~~-~--~gk~vll~F~~~~C~~C~-~~~~~l~ 131 (244)
...|..+|+..+.. .+|++++|.+ + .|+++||.|-..-.+.+. ..+..+.
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~~~~~~~~~~~~~~~~~ 521 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQNDLAQPESGLLALC 521 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEECCTTTTTCTTSHHHHHH
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEecCCCCchhhHHHHHHHH
Confidence 45899999999976 4899988888 4 368999998655444444 3344443
No 345
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=28.69 E-value=1.5e+02 Score=23.23 Aligned_cols=41 Identities=2% Similarity=0.020 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcce
Q 026028 128 SELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPI 177 (244)
Q Consensus 128 ~~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~ 177 (244)
+...+..+++.++|+.|+-.+-- +...+..+. +..+++.++
T Consensus 41 ~~~~~al~~l~~~G~~v~iaTGR--------~~~~~~~~~-~~l~~~~~~ 81 (285)
T 3pgv_A 41 PYAKETLKLLTARGINFVFATGR--------HYIDVGQIR-DNLGIRSYM 81 (285)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSS--------CGGGGHHHH-HHHCSCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHH-HhcCCCccE
Confidence 34445555556778887777632 444555665 566665443
No 346
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=27.92 E-value=1.3e+02 Score=23.66 Aligned_cols=60 Identities=13% Similarity=0.096 Sum_probs=36.7
Q ss_pred Ccccce-EEEcCCCCeeecCCc----CCCEEEEEEecCCCCCCHHhHHHHHHHHHHhhcCCeEEEEEecC
Q 026028 86 KSLYDF-TVKDIDGKDVPLSKF----KGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCN 150 (244)
Q Consensus 86 ~~~pdf-~l~~~~g~~v~L~~~----~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~vi~Vs~D 150 (244)
....++ .+.+.+|..+....+ .++++||.+.+..+.. . .+..+.+.+.++|+.|+.+..-
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~-~----~~~~~~~~l~~~g~~vi~~D~~ 96 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHS-G----RYEELARMLMGLDLLVFAHDHV 96 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCG-G----GGHHHHHHHHTTTEEEEEECCT
T ss_pred cccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCccc-c----hHHHHHHHHHhCCCeEEEEcCC
Confidence 344555 677788877655443 3467888777554322 1 3344555666678999988663
No 347
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=26.97 E-value=18 Score=32.57 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=29.0
Q ss_pred cccCCcccceEEEcCCCCeeecCCc--CCCEEEEEEec
Q 026028 82 AATEKSLYDFTVKDIDGKDVPLSKF--KGKVLLIVNVA 117 (244)
Q Consensus 82 ~~~g~~~pdf~l~~~~g~~v~L~~~--~gk~vll~F~~ 117 (244)
...|..+||+.+.+.+|.+..|.++ .|+++||.|-.
T Consensus 445 ~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~ 482 (570)
T 3fmw_A 445 PWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAG 482 (570)
T ss_dssp SSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSC
T ss_pred ccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecC
Confidence 4589999999998778877788775 46899998853
No 348
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=25.78 E-value=1.2e+02 Score=18.60 Aligned_cols=32 Identities=19% Similarity=0.120 Sum_probs=25.0
Q ss_pred eeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 211 FEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 211 P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
...-|.+.||+|+..-.+..+....+ -|+.+-
T Consensus 13 frfrLka~NGevI~sSe~Y~sk~~a~~gI~sVk 45 (64)
T 3bid_A 13 YRWRLKAANHEIIAQGEGYTSKQNCQHAVDLLK 45 (64)
T ss_dssp EEEEEECTTSCEEEECCCBSCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCEEEECCCcCCHHHHHHHHHHHH
Confidence 55789999999999877777777766 666553
No 349
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=24.96 E-value=1.9e+02 Score=20.48 Aligned_cols=19 Identities=26% Similarity=0.322 Sum_probs=14.2
Q ss_pred eeEEEECCCCcEEEEcCCC
Q 026028 211 FEKFLVDKNGKVIERYPPT 229 (244)
Q Consensus 211 P~~~lID~~G~I~~~~~g~ 229 (244)
...++.|++|.++..+...
T Consensus 127 ~~~~~~DPdG~~iel~~~~ 145 (164)
T 3m2o_A 127 RHFITADPNGVLIDIIKPI 145 (164)
T ss_dssp EEEEEECTTCCEEEEEC--
T ss_pred EEEEEECCCCCEEEEEEEC
Confidence 4578999999999876543
No 350
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=24.61 E-value=37 Score=23.15 Aligned_cols=15 Identities=27% Similarity=0.430 Sum_probs=12.9
Q ss_pred eEEEECCCCcEEEEc
Q 026028 212 EKFLVDKNGKVIERY 226 (244)
Q Consensus 212 ~~~lID~~G~I~~~~ 226 (244)
...|||++|+|++--
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 479999999999864
No 351
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=24.29 E-value=2.7e+02 Score=22.15 Aligned_cols=58 Identities=12% Similarity=0.145 Sum_probs=36.8
Q ss_pred CcccceEEEcCCCCeeecCCcC-------CCEEEEEEecCCCCCCHHhH-HHHHHHHH---------HhhcCCeEEEEEe
Q 026028 86 KSLYDFTVKDIDGKDVPLSKFK-------GKVLLIVNVASRCGLTPSNY-SELSHLYE---------KYKTQGFEILAFP 148 (244)
Q Consensus 86 ~~~pdf~l~~~~g~~v~L~~~~-------gk~vll~F~~~~C~~C~~~~-~~l~~l~~---------~~~~~~~~vi~Vs 148 (244)
+.+|-|.+.|.+|.++-...-. ++.|...|+ ++... ..|.++.. ++. .+++|+.|+
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~------s~~dA~~~L~~lk~~~~~np~~~~~~-~~~kV~~vs 84 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM------SRQEAQAFINELRNAKNKDPKMQEIV-KSLQVTAVP 84 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES------CHHHHHHHHHHHHHCSSCCHHHHHHH-TTCEEEEEE
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe------cHHHHHHHHHHHHhccccCchhhhhc-cCceEEEee
Confidence 4689999999999986654322 455555553 34333 34455555 222 358999998
Q ss_pred cC
Q 026028 149 CN 150 (244)
Q Consensus 149 ~D 150 (244)
++
T Consensus 85 L~ 86 (252)
T 4ev1_A 85 LG 86 (252)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 352
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=23.46 E-value=1.1e+02 Score=21.85 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=28.2
Q ss_pred HHHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCcceee
Q 026028 129 ELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFD 179 (244)
Q Consensus 129 ~l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l~ 179 (244)
...+..++++++|..|+-++-- .......+.+|+ ++++++++.+.
T Consensus 28 ~~~~al~~l~~~G~~iii~TgR-----~~~~~~~~~~~l-~~~gi~~~~I~ 72 (142)
T 2obb_A 28 FAVETLKLLQQEKHRLILWSVR-----EGELLDEAIEWC-RARGLEFYAAN 72 (142)
T ss_dssp THHHHHHHHHHTTCEEEECCSC-----CHHHHHHHHHHH-HTTTCCCSEES
T ss_pred HHHHHHHHHHHCCCEEEEEeCC-----CcccHHHHHHHH-HHcCCCeEEEE
Confidence 3344445556678888877631 001256677887 78888887763
No 353
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=23.09 E-value=2.7e+02 Score=21.73 Aligned_cols=40 Identities=5% Similarity=0.074 Sum_probs=23.6
Q ss_pred HHHHHHHhhcCCeEEEEEecCCCCCCCCCChHHHHHHHHHhcCCCccee
Q 026028 130 LSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIF 178 (244)
Q Consensus 130 l~~l~~~~~~~~~~vi~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~p~l 178 (244)
..+..++++++|+.++-++- .+...+..+. +++++..+++
T Consensus 26 ~~~al~~l~~~G~~~~iaTG--------R~~~~~~~~~-~~l~~~~~~I 65 (288)
T 1nrw_A 26 NENALRQAQRDGIEVVVSTG--------RAHFDVMSIF-EPLGIKTWVI 65 (288)
T ss_dssp HHHHHHHHHHTTCEEEEECS--------SCHHHHHHHH-GGGTCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeC--------CCHHHHHHHH-HHcCCCCcEE
Confidence 33444455667888776652 2566677776 6666665543
No 354
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=22.66 E-value=43 Score=24.32 Aligned_cols=9 Identities=0% Similarity=-0.267 Sum_probs=4.1
Q ss_pred ChHHHHHHH
Q 026028 159 SNPEIKEFA 167 (244)
Q Consensus 159 ~~~~~~~~~ 167 (244)
....+.+.+
T Consensus 97 a~~~l~~~l 105 (161)
T 3hly_A 97 PIDALLAQF 105 (161)
T ss_dssp CHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444444
No 355
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=22.25 E-value=5.2 Score=19.90 Aligned_cols=10 Identities=10% Similarity=0.358 Sum_probs=7.6
Q ss_pred CCCCCHHhHH
Q 026028 119 RCGLTPSNYS 128 (244)
Q Consensus 119 ~C~~C~~~~~ 128 (244)
.||.|+..+|
T Consensus 8 qcpvcqq~mp 17 (29)
T 3vhs_A 8 QCPVCQQMMP 17 (29)
T ss_dssp ECTTTCCEEE
T ss_pred eChHHHHhCc
Confidence 5999987654
No 356
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=20.89 E-value=2.2e+02 Score=19.78 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=12.9
Q ss_pred eeEEEECCCCcEEEEc
Q 026028 211 FEKFLVDKNGKVIERY 226 (244)
Q Consensus 211 P~~~lID~~G~I~~~~ 226 (244)
...|+.||+|.++..+
T Consensus 134 ~~~~f~DPdGn~iel~ 149 (155)
T 4g6x_A 134 VTAILDDTCGNLIQLM 149 (155)
T ss_dssp EEEEEECSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 4578999999988765
No 357
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=20.28 E-value=1.7e+02 Score=20.09 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=13.1
Q ss_pred eeEEEECCCCcEEEEc
Q 026028 211 FEKFLVDKNGKVIERY 226 (244)
Q Consensus 211 P~~~lID~~G~I~~~~ 226 (244)
...|+.||||.++...
T Consensus 116 ~~~~f~DPDGn~iEi~ 131 (149)
T 4gym_A 116 YGRSFHDLDGHLWEVM 131 (149)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred EEEEEEcCCCCEEEEE
Confidence 4679999999988754
No 358
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=20.26 E-value=2.1e+02 Score=19.85 Aligned_cols=32 Identities=16% Similarity=0.034 Sum_probs=25.2
Q ss_pred eeEEEECCCCcEEEEcCCCCChhhHH-HHHHHH
Q 026028 211 FEKFLVDKNGKVIERYPPTTSPFQIE-DIQKLV 242 (244)
Q Consensus 211 P~~~lID~~G~I~~~~~g~~~~~~l~-~i~~lL 242 (244)
+.+.|.+.+|+|+..-.+..+....+ -|+.+.
T Consensus 66 ~yF~Lka~NgqvIg~Se~Y~s~~~~~~gI~sVk 98 (118)
T 2k49_A 66 PYFNLKAANHQIIGTSQMYSSTAARDNGIKSVM 98 (118)
T ss_dssp EEEEEECTTCCEEEEBCCCSSHHHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEcCCcCCHHHHHHHHHHHH
Confidence 67889999999999987777776666 666554
Done!