BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026029
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q67ZM7|PHYK2_ARATH Probable phytol kinase 2, chloroplastic OS=Arabidopsis thaliana
GN=At5g58560 PE=2 SV=2
Length = 307
Score = 224 bits (571), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 139/193 (72%), Gaps = 7/193 (3%)
Query: 2 PLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVC 61
P + A FS P RI + S + RF I + +L AA++ P+N VLSDVC
Sbjct: 26 PPSLAFFSPIPRFLTVRI---ATSFRSSSRFPATKIRKSSL----AAVMFPENSVLSDVC 78
Query: 62 ASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILAS 121
A V++ VA SCL W E +R +FDQKL RKLVHI+IGL+FMLCWPLFSSG +GA+ AS
Sbjct: 79 AFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVFMLCWPLFSSGIQGALFAS 138
Query: 122 LTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPN 181
L PG+NI+RMLL+G G++ DE T+KSMSR+GDRRELL GPLYY ++IT AC+ YW++SP
Sbjct: 139 LVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYVLSITSACIYYWKSSPI 198
Query: 182 GIAAICNLCAGDG 194
IA ICNLCAGDG
Sbjct: 199 AIAVICNLCAGDG 211
>sp|Q2N2K0|PHYK3_SOYBN Probable phytol kinase 3, chloroplastic OS=Glycine max PE=2 SV=1
Length = 319
Score = 216 bits (551), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 122/150 (81%)
Query: 45 PSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFM 104
P + +L +P++SDV A+A+S VA S LRL++ETA+RDLFDQKLNRKLVHISIGLIFM
Sbjct: 74 PPRSTMLHHDPLVSDVYATAISGVVALSFLRLFQETAKRDLFDQKLNRKLVHISIGLIFM 133
Query: 105 LCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYY 164
LC PLFS+ + A+L PG+NI RML++G G+ KDEATVKSMSR+GD RELL GPLYY
Sbjct: 134 LCXPLFSTETWASFFAALIPGINIFRMLVIGLGILKDEATVKSMSRFGDYRELLKGPLYY 193
Query: 165 AITITLACVIYWRNSPNGIAAICNLCAGDG 194
A TITLA +IYWR SP IAAICNLCAGDG
Sbjct: 194 AATITLAAIIYWRTSPISIAAICNLCAGDG 223
>sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os01g0832000 PE=2 SV=3
Length = 304
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
Query: 47 AAMLLPQNPVLS-DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFML 105
AA + P+ L+ D+ ++AV+A VA + LR +EE A+R +F+QKLNRKLVHI+IG++F+L
Sbjct: 60 AAAIPPEASGLAHDLGSAAVTAGVALALLRFFEELAKRGVFEQKLNRKLVHITIGMVFLL 119
Query: 106 CWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYA 165
WPLFSSG LA++ PG+NIIRMLL+G G+ K+EA VKSMSR GD RELL GPLYYA
Sbjct: 120 FWPLFSSGSYAPFLAAVAPGINIIRMLLLGLGVMKNEAMVKSMSRSGDPRELLKGPLYYA 179
Query: 166 ITITLACVIYWRNSPNGIAAICNLCAGDG 194
TIT A I+WR SP IA ICNLCAGDG
Sbjct: 180 TTITFATSIFWRTSPIAIALICNLCAGDG 208
>sp|Q2N2K1|PHYK1_SOYBN Probable phytol kinase 1, chloroplastic OS=Glycine max PE=2 SV=1
Length = 302
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 25 SPKFPP--RFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETAR 82
SP PP R Q P P A +L + A+ + +R ++E R
Sbjct: 39 SPGVPPAVRLDQ---RLPRFVVPGAG----AEDLLYNAGATVGVLGGGYALVRAFDELTR 91
Query: 83 RDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDE 142
R++ Q L+RKLVHI GL+F++ WP+FS+ P+ A+ P VN +R+L+ G + DE
Sbjct: 92 RNILQQGLSRKLVHILSGLLFLVSWPIFSNSPKARYFAAFVPLVNCLRLLVNGLSLASDE 151
Query: 143 ATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDG 194
+KS++R GD ELL GPLYY + + L+ +++WR SP G+ ++ +CAGDG
Sbjct: 152 GLIKSVTREGDPLELLRGPLYYVLILILSALVFWRESPIGVISLAMMCAGDG 203
>sp|Q9LZ76|PHYK1_ARATH Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana GN=VTE5 PE=1
SV=1
Length = 304
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Query: 38 SRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHI 97
+R +L S + A N +L DV A+ A + + +E +R++ Q L+RKLVHI
Sbjct: 53 ARRSLISSAVA----TNSLLHDVGATVAVLGGAYALVLSFESLTKRNVIQQSLSRKLVHI 108
Query: 98 SIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRREL 157
GL+F+L WP+FS A+ P VN +R+++ G + + +KS++R G EL
Sbjct: 109 LSGLLFVLAWPIFSGSTEARYFAAFVPLVNGLRLVINGLSISPNSMLIKSVTREGRAEEL 168
Query: 158 LTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDG 194
L GPL+Y + + + V +WR SP G+ ++ +C GDG
Sbjct: 169 LKGPLFYVLALLFSAVFFWRESPIGMISLAMMCGGDG 205
>sp|Q2N2K4|PHYK_MAIZE Probable phytol kinase, chloroplastic OS=Zea mays PE=2 SV=1
Length = 303
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 85/136 (62%)
Query: 59 DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAI 118
D + + A A S +R+++E R L ++ L+RK+VH+ G++FM WPLFS+
Sbjct: 63 DGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFSNSTEARY 122
Query: 119 LASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRN 178
A++ P +N +R+L+ G ++ DEA VKS++R G ELL GPLYY + + + +++WR
Sbjct: 123 FAAVVPFLNSMRLLIYGLRLYTDEALVKSVTREGKPEELLRGPLYYVLVLLFSVLVFWRE 182
Query: 179 SPNGIAAICNLCAGDG 194
SP GI ++ + GDG
Sbjct: 183 SPIGIVSLSMMSGGDG 198
>sp|Q7XR51|PHYK1_ORYSJ Probable phytol kinase 1, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os04g0670700 PE=2 SV=1
Length = 314
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 84/138 (60%)
Query: 57 LSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRG 116
L D A+ + A A S +R ++ R L +Q L+RK+VH+ G++FM WPLFS+
Sbjct: 74 LRDCAATLLITAGAYSLVRAFDGLTARRLIEQNLSRKIVHVLSGVLFMSSWPLFSNSTEA 133
Query: 117 AILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYW 176
A++ P +N IR+L G + DEA VKS++R G ELL GPLYY I + ++ +++W
Sbjct: 134 RFFAAIVPLLNCIRLLTYGLRLSTDEALVKSVTREGKPEELLRGPLYYVIVLLVSVLVFW 193
Query: 177 RNSPNGIAAICNLCAGDG 194
R SP GI ++ + GDG
Sbjct: 194 RQSPIGIVSLSMMSGGDG 211
>sp|Q2N2K3|PHYK_WHEAT Probable phytol kinase, chloroplastic OS=Triticum aestivum PE=2
SV=1
Length = 300
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 85/139 (61%)
Query: 56 VLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPR 115
+L D A+ + A A S +R ++ R L Q L+RK+VH+ G+ FM WPLFS+
Sbjct: 60 LLRDGGATLLVTAGAYSLVRAFDALTERRLVQQSLSRKVVHVLSGVFFMASWPLFSNSTS 119
Query: 116 GAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIY 175
A++ P +N +R+L G G + DEA VKS++R G R ELL GPLYY I + + +++
Sbjct: 120 ARFFAAVVPFLNCVRLLTYGLGFYSDEALVKSVTREGKREELLRGPLYYVIVLLIIVLVF 179
Query: 176 WRNSPNGIAAICNLCAGDG 194
WR+SP GI ++ + GDG
Sbjct: 180 WRDSPIGIVSLSMMSGGDG 198
>sp|Q2N2K2|PHYK2_SOYBN Probable phytol kinase 2, chloroplastic OS=Glycine max PE=2 SV=1
Length = 292
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 11/136 (8%)
Query: 59 DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAI 118
D + + A A S +R+++E R L ++ L+RK+VH+ G++FM WPLFS+
Sbjct: 63 DGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFSNSTEARY 122
Query: 119 LASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRN 178
A++ P +N +R+L+ G ++ DEA ELL GPLYY + + + +++WR
Sbjct: 123 FAAVVPFLNSMRLLIYGLRLYTDEAL-----------ELLRGPLYYVLVLLFSVLVFWRE 171
Query: 179 SPNGIAAICNLCAGDG 194
SP GI ++ + GDG
Sbjct: 172 SPIGIVSLSMMSGGDG 187
>sp|Q9UU96|GRC3_SCHPO Polynucleotide 5'-hydroxyl-kinase grc3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=grc3 PE=1 SV=1
Length = 736
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 29 PPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARR---DL 85
P +S+FS++ P SPS + L V +V S S+ A +++ EE + R L
Sbjct: 103 PQEYSEFSVASPQTISPSLPLNLDDETVSENVPHSPQSSNDAIPVIKITEENSFRVKDTL 162
Query: 86 F-----DQKLNR--KLVHISIGLIFMLCWPLFSSG-----PRGAILASLTPGVNIIRMLL 133
+ DQKL + S+ F L +SS P A LA TP + I L
Sbjct: 163 YVGLHKDQKLAMVGTFIFRSVRGKFQLFGATYSSACMSWFPLNAPLAFATPVFSAIDNAL 222
Query: 134 VG---SGMWKDEATVKSM---SRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAIC 187
S +D ++S S E P I VI +R + NG++ I
Sbjct: 223 PAMQISEYEEDSLNLRSFAVPSYSPKEHEYELEP--KDILPNFETVIAFRENENGLSKIA 280
Query: 188 NL 189
+
Sbjct: 281 RV 282
>sp|P33015|YEEE_ECOLI UPF0394 inner membrane protein YeeE OS=Escherichia coli (strain
K12) GN=yeeE PE=1 SV=1
Length = 352
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 85 LFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVG 135
LF+++ + + + IGLI +L WPL + R L +P NI++ L+ G
Sbjct: 193 LFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGITSPTANILQFLVAG 243
>sp|Q86XE5|HOGA1_HUMAN Probable 4-hydroxy-2-oxoglutarate aldolase, mitochondrial OS=Homo
sapiens GN=HOGA1 PE=1 SV=1
Length = 327
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 107 WPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVK---SMSRYGDRRELLTGPLY 163
+P +S R +++ + + R+LL GSG +ATV+ SM++ G ++ P Y
Sbjct: 81 FPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCY 140
Query: 164 YAITITLACVIY 175
Y ++ A +I+
Sbjct: 141 YRGRMSSAALIH 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,942,582
Number of Sequences: 539616
Number of extensions: 3348667
Number of successful extensions: 9224
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9210
Number of HSP's gapped (non-prelim): 19
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)