Query 026029
Match_columns 244
No_of_seqs 130 out of 204
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 03:58:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026029.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026029hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ixta_ g.3.6.1 (A:) Conotoxin 30.3 8.9 0.00065 21.5 1.1 14 228-241 14-27 (27)
2 d2g81i1 g.3.13.1 (I:17-72) Bow 11.2 37 0.0027 22.2 0.9 18 218-235 21-38 (56)
3 d1gl0i_ g.4.1.1 (I:) Protease 10.3 44 0.0032 19.3 0.9 17 224-240 9-25 (32)
4 d1wo9a_ g.4.1.1 (A:) Protease 7.1 60 0.0044 19.1 0.6 16 224-239 11-26 (35)
5 d1df9c_ g.3.13.1 (C:) Bowman-B 6.5 75 0.0055 21.5 0.9 18 218-235 31-48 (72)
6 d1tf3a1 g.37.1.1 (A:1-40) Tran 6.0 76 0.0055 18.2 0.6 12 228-239 2-13 (31)
7 d1v54l_ f.23.6.1 (L:) Mitochon 6.0 1.8E+02 0.013 17.9 2.5 20 178-197 15-34 (46)
8 d3ehbb2 f.17.2.1 (B:1-107) Bac 5.9 4.1E+02 0.03 17.9 5.1 39 59-97 36-74 (107)
9 d2ilni1 g.3.13.1 (I:8-60) Bowm 5.5 1E+02 0.0075 19.7 1.1 15 221-235 22-36 (53)
10 d3c07a2 a.121.1.1 (A:90-235) P 5.5 1.4E+02 0.01 22.5 2.0 77 24-103 33-114 (146)
No 1
>d1ixta_ g.3.6.1 (A:) Conotoxin {Conus gloriamaris, Tx IXa [TaxId: 37336]}
Probab=30.32 E-value=8.9 Score=21.50 Aligned_cols=14 Identities=50% Similarity=0.968 Sum_probs=10.7
Q ss_pred ccceeeecceeeec
Q 026029 228 KNCICTFTDIFAIN 241 (244)
Q Consensus 228 ~~~~~~~~~~~~~~ 241 (244)
..|||||..--|.|
T Consensus 14 shcictfrgcgavn 27 (27)
T d1ixta_ 14 SHCICTFRGCGAVN 27 (27)
T ss_dssp SSEEEETTEEEECC
T ss_pred hceeEeeecccccC
Confidence 57999998766654
No 2
>d2g81i1 g.3.13.1 (I:17-72) Bowman-Birk inhibitor, BBI {Cowpea (Vigna unguiculata) [TaxId: 3917]}
Probab=11.24 E-value=37 Score=22.16 Aligned_cols=18 Identities=44% Similarity=0.946 Sum_probs=15.1
Q ss_pred hhccccccccccceeeec
Q 026029 218 LNLFSCKLDIKNCICTFT 235 (244)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~ 235 (244)
+.|.||.-.-|.|+||++
T Consensus 21 vrl~sCHSaCksC~Ct~S 38 (56)
T d2g81i1 21 VRLNSCHSACKSCACTFS 38 (56)
T ss_dssp EEESCCCTTCSCEEECSS
T ss_pred ccccchhhhhcceeeccc
Confidence 457789999999999985
No 3
>d1gl0i_ g.4.1.1 (I:) Protease inhibitor PMP-D2V {Migratory locust (Locusta migratoria) [TaxId: 7004]}
Probab=10.29 E-value=44 Score=19.34 Aligned_cols=17 Identities=29% Similarity=0.679 Sum_probs=14.5
Q ss_pred ccccccceeeecceeee
Q 026029 224 KLDIKNCICTFTDIFAI 240 (244)
Q Consensus 224 ~~~~~~~~~~~~~~~~~ 240 (244)
|.|-..|.||-|.|.+-
T Consensus 9 k~dcntc~ct~tgvw~c 25 (32)
T d1gl0i_ 9 QQDCNTCTCTPTGVWGC 25 (32)
T ss_dssp ECSSCEEEECTTSCEEE
T ss_pred cccCCeeeecCCcEEEE
Confidence 78999999999988763
No 4
>d1wo9a_ g.4.1.1 (A:) Protease inhibitor SGTI {Desert locust (Schistocerca gregaria) [TaxId: 7010]}
Probab=7.07 E-value=60 Score=19.09 Aligned_cols=16 Identities=44% Similarity=0.798 Sum_probs=13.9
Q ss_pred ccccccceeeecceee
Q 026029 224 KLDIKNCICTFTDIFA 239 (244)
Q Consensus 224 ~~~~~~~~~~~~~~~~ 239 (244)
|+|-..|.||-|.|.+
T Consensus 11 k~DCNTC~Ct~tGvW~ 26 (35)
T d1wo9a_ 11 KQDCNTCTCTPTGIWG 26 (35)
T ss_dssp EETTEEEEECTTSCEE
T ss_pred cccCCeeeccCCcEEE
Confidence 7889999999988876
No 5
>d1df9c_ g.3.13.1 (C:) Bowman-Birk inhibitor, BBI {Mung bean (Vigna radiata) [TaxId: 157791]}
Probab=6.48 E-value=75 Score=21.52 Aligned_cols=18 Identities=44% Similarity=0.864 Sum_probs=14.6
Q ss_pred hhccccccccccceeeec
Q 026029 218 LNLFSCKLDIKNCICTFT 235 (244)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~ 235 (244)
+.|-+|.-.-|.|+||+.
T Consensus 31 vrl~sCHSaCksC~Ct~S 48 (72)
T d1df9c_ 31 IRLNSCHSACKSCICTRS 48 (72)
T ss_dssp CSSSCCCTTCSCEEECSS
T ss_pred cCcchhhhhhcceeeccc
Confidence 456788888999999874
No 6
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=5.97 E-value=76 Score=18.19 Aligned_cols=12 Identities=50% Similarity=0.789 Sum_probs=9.3
Q ss_pred ccceeeecceee
Q 026029 228 KNCICTFTDIFA 239 (244)
Q Consensus 228 ~~~~~~~~~~~~ 239 (244)
|+-||+|.|--|
T Consensus 2 k~~iCsf~dC~A 13 (31)
T d1tf3a1 2 KRYICSFADCGA 13 (31)
T ss_dssp CCEECSSGGGCC
T ss_pred CceEeeCCCcch
Confidence 678999998644
No 7
>d1v54l_ f.23.6.1 (L:) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.96 E-value=1.8e+02 Score=17.90 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=16.5
Q ss_pred CChhHHHHHHHHhhhhhhhh
Q 026029 178 NSPNGIAAICNLCAGDGKET 197 (244)
Q Consensus 178 ~~PiaiigIlvLa~GDGLAa 197 (244)
+..+..++++++-+|-|+|+
T Consensus 15 ~Nk~rLla~m~~~fGsgfa~ 34 (46)
T d1v54l_ 15 ENKWRLLAMMTLFFGSGFAA 34 (46)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccc
Confidence 44567899999999999986
No 8
>d3ehbb2 f.17.2.1 (B:1-107) Bacterial aa3 type cytochrome c oxidase subunit II {Paracoccus denitrificans [TaxId: 266]}
Probab=5.93 E-value=4.1e+02 Score=17.91 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCcccccchhhhhh
Q 026029 59 DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHI 97 (244)
Q Consensus 59 D~~a~~lt~~~v~~vL~i~e~L~kr~~l~~elsRKiVHI 97 (244)
|..-.+.+.+.+++...+...+-|...-+.+..+|+-|=
T Consensus 36 ~~v~~i~~~I~~~V~~~~~~~~~~~r~~~~~~~~~~~~n 74 (107)
T d3ehbb2 36 HFVLYIITAVTIFVCLLLLICIVRFNRRANPVPARFTHN 74 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSBTTTSSSCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCccccccccc
Confidence 444444444444433333333433322244556677663
No 9
>d2ilni1 g.3.13.1 (I:8-60) Bowman-Birk inhibitor, BBI {Snail medic (Medicago scutellata) [TaxId: 36901]}
Probab=5.47 E-value=1e+02 Score=19.68 Aligned_cols=15 Identities=33% Similarity=0.789 Sum_probs=11.8
Q ss_pred cccccccccceeeec
Q 026029 221 FSCKLDIKNCICTFT 235 (244)
Q Consensus 221 ~~~~~~~~~~~~~~~ 235 (244)
.+|.-.-|.|+||++
T Consensus 22 ~sCHsaCksC~Ct~S 36 (53)
T d2ilni1 22 EKCHSACKSCLCTRS 36 (53)
T ss_dssp SCCCSSCSSEEEESS
T ss_pred ccchhhccceEeccC
Confidence 467777889999985
No 10
>d3c07a2 a.121.1.1 (A:90-235) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=5.46 E-value=1.4e+02 Score=22.55 Aligned_cols=77 Identities=12% Similarity=-0.012 Sum_probs=44.2
Q ss_pred CCCCCCCccccccccCCCCCCcc-----cccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHhhccCcccccchhhhhhh
Q 026029 24 PSPKFPPRFSQFSISRPNLTSPS-----AAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHIS 98 (244)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~D~~a~~lt~~~v~~vL~i~e~L~kr~~l~~elsRKiVHIg 98 (244)
-+|..|- |+|+.+|......+ +++-..+.....+.-..+-...|+.....+--|+.. ..-.+|=+|.+|+-+
T Consensus 33 ~~P~~pl--spfs~es~~aR~~a~~l~~e~i~~~~~~~~~~l~~~lp~l~W~~~l~il~fW~~D-~S~~~ekT~~lieks 109 (146)
T d3c07a2 33 ADPDSPL--SPFSPESEHARVEAIGIHRAVLAGAKTKVPEELRDILPELMWLSQMGLVLYWIFD-RTEGRERSYRLAERG 109 (146)
T ss_dssp TCTTSTT--STTSGGGHHHHHHHHHHHHHHHHTSSSCCCGGGTTHHHHHHHHHHHHHHHHHHHC-CSTTSHHHHHHHHHH
T ss_pred cCCCCCC--CCCCcccHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhcC-CCcchHHHHHHHHHH
Confidence 3455553 77888876555543 223223333344554455556665533333344544 356788899999998
Q ss_pred hhHHH
Q 026029 99 IGLIF 103 (244)
Q Consensus 99 ~G~V~ 103 (244)
+++++
T Consensus 110 v~l~~ 114 (146)
T d3c07a2 110 ARLTA 114 (146)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87664
Done!